Citrus Sinensis ID: 024681
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 264 | 2.2.26 [Sep-21-2011] | |||||||
| O07015 | 269 | Sigma factor SigB regulat | yes | no | 0.935 | 0.918 | 0.386 | 6e-45 | |
| Q82SL8 | 252 | Pimelyl-[acyl-carrier pro | yes | no | 0.893 | 0.936 | 0.233 | 1e-10 | |
| Q5ZVG6 | 239 | Pimelyl-[acyl-carrier pro | yes | no | 0.791 | 0.874 | 0.269 | 9e-10 | |
| Q2Y9Y7 | 263 | Pimelyl-[acyl-carrier pro | yes | no | 0.905 | 0.908 | 0.245 | 2e-09 | |
| Q5X590 | 239 | Pimelyl-[acyl-carrier pro | yes | no | 0.75 | 0.828 | 0.270 | 3e-09 | |
| A5IBW4 | 239 | Pimelyl-[acyl-carrier pro | yes | no | 0.791 | 0.874 | 0.265 | 3e-09 | |
| C4LA13 | 261 | Pimelyl-[acyl-carrier pro | yes | no | 0.909 | 0.919 | 0.248 | 1e-08 | |
| Q5WW99 | 239 | Pimelyl-[acyl-carrier pro | yes | no | 0.791 | 0.874 | 0.261 | 2e-08 | |
| Q15N09 | 258 | Pimelyl-[acyl-carrier pro | yes | no | 0.863 | 0.883 | 0.249 | 2e-08 | |
| A4VQH7 | 265 | Putative aminoacrylate hy | no | no | 0.825 | 0.822 | 0.231 | 2e-08 |
| >sp|O07015|RSBQ_BACSU Sigma factor SigB regulation protein RsbQ OS=Bacillus subtilis (strain 168) GN=rsbQ PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 181 bits (458), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 148/251 (58%), Gaps = 4/251 (1%)
Query: 4 LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILP-YLNHHRVIMFDLVCAGSVNPDYFD 62
+L HV+V G+G ++ A GFG DQS W + P + HRVI+FD V +G + +D
Sbjct: 5 ILSRNHVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYD 64
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
RY TLD Y D+L++ + L + +VGHSV A+IG+LASIRRP+LF+ L+++G SP
Sbjct: 65 LNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPC 124
Query: 123 FLND-EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA-DVPAAVREFSRTLFNMR 180
+LND +Y+GGFEE ++ + ME NY WA +A + D P E +
Sbjct: 125 YLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTD 184
Query: 181 PDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240
P I+ +K F +D R L V VP +I+Q + D+ P +V +Y+ +HL ++++ ++
Sbjct: 185 PVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHL-PYSSLKQME 243
Query: 241 IEGHLPHLSAP 251
GH PH+S P
Sbjct: 244 ARGHCPHMSHP 254
|
Positive regulator required for energy stress activation of the sigma-B transcription factor. Could be required for rsbP phosphatase activity. Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|Q82SL8|BIOH_NITEU Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN=bioH PE=3 SV=2 | Back alignment and function description |
|---|
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 17/253 (6%)
Query: 5 LEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHH-RVIMFDLVCAGSVNPDYFDF 63
+ ++H+ G G LV+ HG+ W ++ L+ R+ DL G+
Sbjct: 1 MASIHIETTGNGPD-LVMLHGWAMHSGVWDGVVESLSQRFRLHQVDLPGHGA-------- 51
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123
R LD+ +D + ++ R + G S+ + + +++ P+ +L+L+ ++P F
Sbjct: 52 SRDCALDS-LDQMTEVIADRLPGRYSVCGWSLGGQVAIRLALQAPERVQQLVLVASTPCF 110
Query: 124 LNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV-GADVPAAVREFSR-TLFNMRP 181
+ D+ G E++ + + +Y + L V G++ A V + R ++ +P
Sbjct: 111 VRRADWPWGMEDSTLTLFMENLARDYTQTLNRFLTLQVSGSEDQARVLAWLRKSILRGQP 170
Query: 182 DISLFVS---KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238
+ K + +DLR L V P ++I DV P A+++Q+HL R + L
Sbjct: 171 PTPATLQAGLKILQTSDLRAELNQVSQPVLLIHGRNDVITPAGAADWMQQHL-PRARLVL 229
Query: 239 LKIEGHLPHLSAP 251
GH P LS P
Sbjct: 230 FPHCGHAPFLSFP 242
|
The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) (taxid: 228410) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|Q5ZVG6|BIOH_LEGPH Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 47/256 (18%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGSVNP--DYFDFR 64
+H+ G G LVL HG+G D WQ I+PYL +++I+ DL G + P D+ F+
Sbjct: 3 IHLDKYGQG-MPLVLFHGWGFDSQIWQPIIPYLKPKYQIILVDLPGFG-LTPMMDWESFK 60
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
+ N+LD L ++ A G S+ + +I P LI I +SPRF+
Sbjct: 61 K------------NLLDQLP-DKFALAGWSMGGLYATRLAIEEPARVQYLINITSSPRFI 107
Query: 125 NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREF-SRTLFNMRPDI 183
+D D+ G EE VF N + D+ ++EF S L M+ D
Sbjct: 108 SDIDWPGVAEE-----VFVNFYNN------------LSKDINKTLKEFISLQLNKMKCDF 150
Query: 184 SL----------FVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233
+ F + + D R L + +P V + D PV ++++
Sbjct: 151 KIGNPPSPEGLAFGLEILGTWDFREQLKQISIPTVYLFGRLDPITPVKTMAIMEKNYPNF 210
Query: 234 NTVELLKIEGHLPHLS 249
V L H+P LS
Sbjct: 211 KYV-LFNRAAHMPFLS 225
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The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) (taxid: 272624) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|Q2Y9Y7|BIOH_NITMU Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 14/253 (5%)
Query: 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHH-RVIMFDLVCAGSVNPDYFDFRR 65
+L+V +G G LVL HG+ W L H R+ + DL G + ++R
Sbjct: 5 SLYVESLGEGPD-LVLLHGWAMHSGMWGSTRRSLAQHFRLHLVDLPGHG-FSRGALPYKR 62
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
D + +++ L + C G S+ + + ++R P K+IL +P F+
Sbjct: 63 GEKNGVSEDMVERVVEVLPPD-CVICGWSLGGQLAIELALREPARVEKIILTSTTPSFVK 121
Query: 126 DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV--GADVPAAVREFSRTLFNM---R 180
ED+ G EE + + ++ + L V G D + E R LF
Sbjct: 122 REDWQWGMEELTLKAFAENLRRDFSTTMKRFLTLQVSGGGDAGKVLPEMRRLLFERSAPE 181
Query: 181 PDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240
P+ + V DLRG L + P ++I DV A ++++ VEL
Sbjct: 182 PEALEAGLQIVLANDLRGKLRNIVQPTLLIHGENDVIAHPEAAAWMKQQF---QDVELAM 238
Query: 241 IEG--HLPHLSAP 251
+ H+P LS P
Sbjct: 239 LPNCSHVPFLSYP 251
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The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) (taxid: 323848) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|Q5X590|BIOH_LEGPA Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Legionella pneumophila (strain Paris) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 102/244 (41%), Gaps = 46/244 (18%)
Query: 20 LVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGSVNP--DYFDFRRYTTLDAYVDDL 76
LVL HG+G D WQ I+PYL +++I+ DL G + P D+ F++
Sbjct: 14 LVLFHGWGFDNQIWQPIIPYLKPKYQIILVDLPGFG-LTPMMDWESFKK----------- 61
Query: 77 LNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEA 136
N+LD L ++ A G S+ + +I P LI I +SPRF++D D+ G EE
Sbjct: 62 -NLLDQLP-DKFALAGWSMGGLYATRLAIEEPARVQYLINITSSPRFISDIDWPGVAEE- 118
Query: 137 EIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREF-SRTLFNMRPDISL---------- 185
VF N + D+ ++EF S L M+ D +
Sbjct: 119 ----VFVNFYNN------------LSKDINKTLKEFISLQLNKMKFDFKIGNPPSPEGLA 162
Query: 186 FVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHL 245
F + + D R L + +P V + D PV ++++ V L H+
Sbjct: 163 FGLEILGTWDFREQLKQITIPTVYLFGRLDPITPVKTMAIMEKNYPNFKYV-LFNRAAHM 221
Query: 246 PHLS 249
P LS
Sbjct: 222 PFLS 225
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The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Legionella pneumophila (strain Paris) (taxid: 297246) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|A5IBW4|BIOH_LEGPC Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Legionella pneumophila (strain Corby) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 106/256 (41%), Gaps = 47/256 (18%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGSVNP--DYFDFR 64
+H+ G G LVL HG+G D WQ I+PYL +++I+ DL G + P D+ F+
Sbjct: 3 IHLDKYGQG-MPLVLFHGWGFDSQIWQPIIPYLKPKYQIILVDLPGFG-LTPMMDWESFK 60
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
+ N+LD L ++ A G S+ + +I P LI I +SPRF+
Sbjct: 61 K------------NLLDQLP-DKFALAGWSMGGLYATRLAIEEPARVQYLINITSSPRFI 107
Query: 125 NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREF-SRTLFNMRPDI 183
+D D+ G EE VF N + D+ ++EF S L M+ D
Sbjct: 108 SDVDWPGVAEE-----VFVNFYNN------------LSKDINKTLKEFISLQLNKMKFDF 150
Query: 184 SL----------FVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233
+ F + + D R L + +P V + D P ++++
Sbjct: 151 KIGNPPSPEGLAFGLEILGTWDFREQLKQISIPTVYLFGRLDPITPAKTMAIMEKNYPNF 210
Query: 234 NTVELLKIEGHLPHLS 249
V L H+P LS
Sbjct: 211 KYV-LFNRAAHMPFLS 225
|
The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Legionella pneumophila (strain Corby) (taxid: 400673) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|C4LA13|BIOH_TOLAT Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 30/270 (11%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAG-SVNPDYFDFRR 65
+++ +G G LVL HG+G + + WQ I+P L ++R+ + DL G S + D R
Sbjct: 3 MYIERIGQGPD-LVLLHGWGLNGAVWQEIVPLLQPYYRLHLVDLPGFGYSRDVIMPDSRL 61
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
T + + +L D LG S+ +I L ++ P +LIL G+SP FL
Sbjct: 62 ATWSETVLAELPARFDLLG--------WSMGGLIALRMALDHPSRINRLILTGSSPCFLR 113
Query: 126 DEDYHG-------GFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFN 178
+++ G GF A + +E + G +V DV + ++
Sbjct: 114 QDNWPGIHPDVLSGFNCALQQNPRKTIERFLAIQSMGSE--SVKEDV-----KRLKSWLQ 166
Query: 179 MRPD----ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN 234
RPD + DLR L +R P + I +D VP + + +++ + G
Sbjct: 167 QRPDAAPAALSAGLALLSSVDLRTELSQLRCPVLGIYGRQDSLVPAAAVDPIEKLITGSR 226
Query: 235 TVELLKIEGHLPHLSAPAIVGPVIRRALSR 264
+V + H P +S P +R+ L +
Sbjct: 227 SV-VFAQAAHAPFISHPQQFSEALRQFLEQ 255
|
The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Tolumonas auensis (strain DSM 9187 / TA4) (taxid: 595494) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|Q5WW99|BIOH_LEGPL Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Legionella pneumophila (strain Lens) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 105/256 (41%), Gaps = 47/256 (18%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGSVNP--DYFDFR 64
+H+ G G LVL HG+G D WQ I+PYL +++I+ DL G + P D+ F+
Sbjct: 3 IHLDKHGQG-MPLVLFHGWGFDSQIWQPIIPYLKPKYQIILVDLPGFG-LTPMMDWESFK 60
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
+ N+ D L ++ A G S+ + +I P LI I +SPRF+
Sbjct: 61 K------------NLFDQLP-DKFALAGWSMGGLYATRLAIEEPARVQYLINITSSPRFI 107
Query: 125 NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREF-SRTLFNMRPDI 183
+D D+ G EE VF N + D+ ++EF S L M+ D
Sbjct: 108 SDIDWPGVAEE-----VFVNFYNN------------LSKDINKTLKEFISLQLNKMKFDF 150
Query: 184 SL----------FVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233
+ F + + D R L + +P V + D P ++++
Sbjct: 151 KIGNPPSPEGLAFGLEILGTWDFREQLKQISIPTVYLFGRLDPITPAKTMAIMEKNYPNF 210
Query: 234 NTVELLKIEGHLPHLS 249
V L H+P LS
Sbjct: 211 KYV-LFNRAAHMPFLS 225
|
The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Legionella pneumophila (strain Lens) (taxid: 297245) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|Q15N09|BIOH_PSEA6 Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 105/253 (41%), Gaps = 25/253 (9%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHH-RVIMFDLVCAGSVN---PDYFDF 63
L R VG+G VL HG+G + WQ I L H V DL G N P +D
Sbjct: 5 LKTRTVGSGPN-FVLLHGWGVNSGVWQPIAKQLEQHFSVTYVDLPGFGENNQIMPKPYDL 63
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123
+ A N+L V G S+ ++ ++ P +LILI SP+F
Sbjct: 64 KNLAECVA------NVLPENSV----LAGWSLGGLVAQHVALLEPTNVKQLILIATSPKF 113
Query: 124 LNDEDYHG---GFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAA-VREFSRTL-FN 178
D+ G +A ++ + + E + A A+G+D +R+ ++ +
Sbjct: 114 QKGNDWAGIDPNILQAFSQQLVKNLSKTIERF---LAIQAMGSDSAKTDIRKIKNSIEAS 170
Query: 179 MRPDISLFVS--KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236
+ DI+ + + DLR + +++P + D VPV + Y+QR L ++V
Sbjct: 171 PQADIAALTAGLDILEHVDLRDQIAALKMPIHWMLGRLDSLVPVKLQGYVQRSLAKNHSV 230
Query: 237 ELLKIEGHLPHLS 249
+ H P +S
Sbjct: 231 TIFPHASHAPFIS 243
|
The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) (taxid: 342610) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|A4VQH7|RUTD_PSEU5 Putative aminoacrylate hydrolase RutD OS=Pseudomonas stutzeri (strain A1501) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 106/229 (46%), Gaps = 11/229 (4%)
Query: 20 LVLAHGFGTDQSAWQRILPYLNH-HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78
LVL+ G G + W LP L +RV+++D + N + ++++ +LL
Sbjct: 16 LVLSSGLGGAAAFWLPQLPALTQDYRVLVYDQL---GTNKSPANLPAGYSIESMAVELLE 72
Query: 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEI 138
+LDTLG+ RC ++GH++ ++GL ++ RP L L+ I A + + + +
Sbjct: 73 LLDTLGIRRCHFIGHALGGLVGLQIALLRPQLLQSLVPINA---WSSPNPHSARCFAVRL 129
Query: 139 DKVFRAMEANY-EAWA-YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVS-KTVFDTD 195
+ + A Y +A + + Y + A+ R+ + L + P ++L + + D
Sbjct: 130 KLLHDSGPAAYVQAQSLFLYPADWIAANSERLARDDAHALAHFPPTMNLVRRIEALLAFD 189
Query: 196 LRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGH 244
+ L + P ++I D+ VP +++L ++ + LL GH
Sbjct: 190 IEAELPRITTPTLLIANRDDMLVPWQRSQHLADNMPNAQ-LALLNYGGH 237
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Pseudomonas stutzeri (strain A1501) (taxid: 379731) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 264 | ||||||
| 225458830 | 266 | PREDICTED: sigma factor sigB regulation | 1.0 | 0.992 | 0.819 | 1e-126 | |
| 255538072 | 266 | sigma factor sigb regulation protein rsb | 0.988 | 0.981 | 0.820 | 1e-124 | |
| 224067208 | 266 | predicted protein [Populus trichocarpa] | 0.988 | 0.981 | 0.805 | 1e-123 | |
| 224129864 | 266 | predicted protein [Populus trichocarpa] | 0.988 | 0.981 | 0.793 | 1e-121 | |
| 21593927 | 267 | unknown [Arabidopsis thaliana] | 0.992 | 0.981 | 0.790 | 1e-120 | |
| 297828884 | 267 | esterase/lipase/thioesterase family prot | 0.992 | 0.981 | 0.790 | 1e-119 | |
| 18396732 | 267 | alpha/beta-hydrolase domain-containing p | 0.992 | 0.981 | 0.790 | 1e-119 | |
| 404434487 | 267 | DAD2 [Petunia x hybrida] | 0.984 | 0.973 | 0.777 | 1e-117 | |
| 414145488 | 269 | Chain A, Crystal Structure Of Dad2 | 0.984 | 0.966 | 0.777 | 1e-117 | |
| 414145489 | 269 | Chain A, Crystal Structure Of Dad2 S96a | 0.984 | 0.966 | 0.773 | 1e-117 |
| >gi|225458830|ref|XP_002285308.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/266 (81%), Positives = 249/266 (93%), Gaps = 2/266 (0%)
Query: 1 MGD-LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPY-LNHHRVIMFDLVCAGSVNP 58
MG+ LLEAL+VRVVG G+R+LVLAHGFGTDQSAWQRILPY L H R+I++DLVCAGSVNP
Sbjct: 1 MGNTLLEALNVRVVGNGERVLVLAHGFGTDQSAWQRILPYFLPHFRIILYDLVCAGSVNP 60
Query: 59 DYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIG 118
DYFDFRRYTTLDA+VDDLLNILD LGV+RCAYVGHSVSAMIG+LASIRRP+LFTKL+LIG
Sbjct: 61 DYFDFRRYTTLDAFVDDLLNILDALGVDRCAYVGHSVSAMIGILASIRRPELFTKLVLIG 120
Query: 119 ASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFN 178
ASPRFLND DYHGGFEE EI+KVF AMEANY+AW +G+APL+VGADVPAAVREFSRTLFN
Sbjct: 121 ASPRFLNDHDYHGGFEEGEIEKVFSAMEANYDAWVHGFAPLSVGADVPAAVREFSRTLFN 180
Query: 179 MRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238
MRPDI+LFVS+T+F++DLRG+LGLV+VPC IIQT+KDVSVP SVA YL+ HLGGRNTVE+
Sbjct: 181 MRPDITLFVSRTIFNSDLRGVLGLVKVPCCIIQTAKDVSVPTSVALYLKNHLGGRNTVEM 240
Query: 239 LKIEGHLPHLSAPAIVGPVIRRALSR 264
L +EGHLPHLSAP ++ PV+RRALSR
Sbjct: 241 LNVEGHLPHLSAPMLLAPVLRRALSR 266
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255538072|ref|XP_002510101.1| sigma factor sigb regulation protein rsbq, putative [Ricinus communis] gi|223550802|gb|EEF52288.1| sigma factor sigb regulation protein rsbq, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/262 (82%), Positives = 244/262 (93%), Gaps = 1/262 (0%)
Query: 4 LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFD 62
LLEAL+VRVVG+GD+ILVLAHGFGTDQSAWQRILP+ ++ +I++DLVCAGSVNPDYFD
Sbjct: 5 LLEALNVRVVGSGDKILVLAHGFGTDQSAWQRILPFFTQNYSIILYDLVCAGSVNPDYFD 64
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
FRRYTTLDAYVDDLLNILD L V+RCAYVGHSVSAMIG+LASIRRP+LF+KLILIGASPR
Sbjct: 65 FRRYTTLDAYVDDLLNILDALRVDRCAYVGHSVSAMIGILASIRRPELFSKLILIGASPR 124
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
FLND+DYHGGFE +I+ VF AMEANYEAW G+APLAVGADVPAAVREFSRTLFNMRPD
Sbjct: 125 FLNDKDYHGGFERPDIENVFTAMEANYEAWVNGFAPLAVGADVPAAVREFSRTLFNMRPD 184
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
I+LFVS+TVF++DLRGILGLV+VPC IIQT+KDVSVP SVAEYL+ HLGGRNTVE+L+ E
Sbjct: 185 ITLFVSRTVFNSDLRGILGLVKVPCCIIQTAKDVSVPASVAEYLRIHLGGRNTVEILRTE 244
Query: 243 GHLPHLSAPAIVGPVIRRALSR 264
GHLPHLSAPA++ V+RRALSR
Sbjct: 245 GHLPHLSAPALLAQVLRRALSR 266
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224067208|ref|XP_002302409.1| predicted protein [Populus trichocarpa] gi|222844135|gb|EEE81682.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/262 (80%), Positives = 242/262 (92%), Gaps = 1/262 (0%)
Query: 4 LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGSVNPDYFD 62
+L+AL+VRV G GD+ LV AHGFGTDQSAWQRILP+ ++RVI+FDLVCAGSVNPDYF+
Sbjct: 5 ILDALNVRVEGQGDKFLVFAHGFGTDQSAWQRILPFFTPYYRVILFDLVCAGSVNPDYFN 64
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
FRRYT L+AYVDDLLNILDTLGV+RC YVGHSVSAMIG+LASIRRP+LFTKLI+IGASPR
Sbjct: 65 FRRYTNLEAYVDDLLNILDTLGVDRCFYVGHSVSAMIGILASIRRPELFTKLIMIGASPR 124
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
FLND+DYHGGFE+ EI+ VF AMEANYEAW G+APLAVGADVPAAVREFSRTLFNMRPD
Sbjct: 125 FLNDKDYHGGFEQEEIESVFVAMEANYEAWVKGFAPLAVGADVPAAVREFSRTLFNMRPD 184
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
I+LFVS+TVF++DLRGILGLV+VPC +IQTSKDVSVP SVA+YL+ HLGG+ TVE+L+ E
Sbjct: 185 ITLFVSRTVFNSDLRGILGLVKVPCCVIQTSKDVSVPASVAKYLKNHLGGKATVEMLRTE 244
Query: 243 GHLPHLSAPAIVGPVIRRALSR 264
GHLPHLSAPA++ PVIRRALSR
Sbjct: 245 GHLPHLSAPAMLAPVIRRALSR 266
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224129864|ref|XP_002320690.1| predicted protein [Populus trichocarpa] gi|222861463|gb|EEE99005.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/262 (79%), Positives = 239/262 (91%), Gaps = 1/262 (0%)
Query: 4 LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGSVNPDYFD 62
+L+AL+VRV G GD++LV AHG GTDQSAWQRILP+ ++RVI+FDLVCAGSVNPD+F+
Sbjct: 5 ILDALNVRVQGEGDKVLVFAHGVGTDQSAWQRILPFFTPYYRVILFDLVCAGSVNPDHFN 64
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
FRR T L+AYVDDLLNILDTLGV+RC YVGHSVSAMIG+LASIRRP+LF K+ILIGASPR
Sbjct: 65 FRRCTNLEAYVDDLLNILDTLGVDRCFYVGHSVSAMIGILASIRRPELFIKMILIGASPR 124
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
FLNDEDYHGGFE+ EI+ VF+AMEANYEAW G+APLAVGADVP AVREF+RTLFNMRPD
Sbjct: 125 FLNDEDYHGGFEQEEIESVFKAMEANYEAWVNGFAPLAVGADVPLAVREFTRTLFNMRPD 184
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
I+LFVS+TVF++DLRGILGLV+VPC IIQTSKDVSVP SVAEYL+ HLGG NTVE L+ E
Sbjct: 185 ITLFVSRTVFNSDLRGILGLVKVPCCIIQTSKDVSVPASVAEYLKNHLGGENTVETLRTE 244
Query: 243 GHLPHLSAPAIVGPVIRRALSR 264
GHLPHLSAPA++ PVI+RALSR
Sbjct: 245 GHLPHLSAPAMLAPVIKRALSR 266
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21593927|gb|AAM65892.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/263 (79%), Positives = 235/263 (89%), Gaps = 1/263 (0%)
Query: 3 DLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYF 61
++LEAL+VRVVGTGDRIL LAHGFGTDQSAW ILPY ++RV+++DLVCAGSVNPDYF
Sbjct: 5 NILEALNVRVVGTGDRILFLAHGFGTDQSAWHLILPYFTQNYRVVLYDLVCAGSVNPDYF 64
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
DF RYTTLD YVDDLLNI+D+LG+ CAYVGHSVSAMIG++ASIRRP+LF+KLILIG SP
Sbjct: 65 DFNRYTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFSKLILIGFSP 124
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP 181
RFLNDEDYHGGFEE EI+KVF AMEANYEAW +G+APLAVGADVPAAVREFSRTLFNMRP
Sbjct: 125 RFLNDEDYHGGFEEGEIEKVFSAMEANYEAWVHGFAPLAVGADVPAAVREFSRTLFNMRP 184
Query: 182 DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241
DISLFVS+TVF++DLRG+LGLVRVP +IQT+KDVSVP SVAEYL+ HLGG TVE LK
Sbjct: 185 DISLFVSRTVFNSDLRGVLGLVRVPTCVIQTAKDVSVPASVAEYLRSHLGGETTVETLKT 244
Query: 242 EGHLPHLSAPAIVGPVIRRALSR 264
EGHLP LSAPA + +RRAL R
Sbjct: 245 EGHLPQLSAPAQLAQFLRRALPR 267
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297828884|ref|XP_002882324.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328164|gb|EFH58583.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/263 (79%), Positives = 235/263 (89%), Gaps = 1/263 (0%)
Query: 3 DLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYF 61
++LEAL+VRVVGTGDRIL LAHGFGTDQSAW ILPY ++RV+++DLVCAGSVNPDYF
Sbjct: 5 NILEALNVRVVGTGDRILFLAHGFGTDQSAWHLILPYFTQNYRVVLYDLVCAGSVNPDYF 64
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
DF RYTTLD YVDDLLNI+D+LG+ CAYVGHSVSAMIG++ASIRRP+LF+KLILIG SP
Sbjct: 65 DFNRYTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFSKLILIGFSP 124
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP 181
RFLNDEDYHGGFEE EI+KVF AMEANYEAW +G+APLAVGADVPAAVREFSRTLFNMRP
Sbjct: 125 RFLNDEDYHGGFEEGEIEKVFSAMEANYEAWVHGFAPLAVGADVPAAVREFSRTLFNMRP 184
Query: 182 DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241
DISLFVS+TVF++DLRG+LG VRVP +IQT+KDVSVP SVAEYL+ HLGG TVE LK
Sbjct: 185 DISLFVSRTVFNSDLRGVLGFVRVPTCVIQTAKDVSVPASVAEYLRSHLGGDTTVETLKT 244
Query: 242 EGHLPHLSAPAIVGPVIRRALSR 264
EGHLPHLSAPA + +RRAL R
Sbjct: 245 EGHLPHLSAPAQLAQFLRRALPR 267
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18396732|ref|NP_566220.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gi|444302310|pdb|4IH4|A Chain A, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14 gi|444302311|pdb|4IH4|B Chain B, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14 gi|444302312|pdb|4IH4|C Chain C, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14 gi|444302313|pdb|4IH4|D Chain D, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14 gi|6223644|gb|AAF05858.1|AC011698_9 unknown protein [Arabidopsis thaliana] gi|17381267|gb|AAL36052.1| AT3g03990/T11I18_10 [Arabidopsis thaliana] gi|20453359|gb|AAM19918.1| AT3g03990/T11I18_10 [Arabidopsis thaliana] gi|332640502|gb|AEE74023.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/263 (79%), Positives = 235/263 (89%), Gaps = 1/263 (0%)
Query: 3 DLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYF 61
++LEAL+VRVVGTGDRIL LAHGFGTDQSAW ILPY ++RV+++DLVCAGSVNPDYF
Sbjct: 5 NILEALNVRVVGTGDRILFLAHGFGTDQSAWHLILPYFTQNYRVVLYDLVCAGSVNPDYF 64
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
DF RYTTLD YVDDLLNI+D+LG+ CAYVGHSVSAMIG++ASIRRP+LF+KLILIG SP
Sbjct: 65 DFNRYTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFSKLILIGFSP 124
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP 181
RFLNDEDYHGGFEE EI+KVF AMEANYEAW +G+APLAVGADVPAAVREFSRTLFNMRP
Sbjct: 125 RFLNDEDYHGGFEEGEIEKVFSAMEANYEAWVHGFAPLAVGADVPAAVREFSRTLFNMRP 184
Query: 182 DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241
DISLFVS+TVF++DLRG+LGLVRVP +IQT+KDVSVP SVAEYL+ HLGG TVE LK
Sbjct: 185 DISLFVSRTVFNSDLRGVLGLVRVPTCVIQTAKDVSVPASVAEYLRSHLGGDTTVETLKT 244
Query: 242 EGHLPHLSAPAIVGPVIRRALSR 264
EGHLP LSAPA + +RRAL R
Sbjct: 245 EGHLPQLSAPAQLAQFLRRALPR 267
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|404434487|gb|AFR68698.1| DAD2 [Petunia x hybrida] | Back alignment and taxonomy information |
|---|
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/261 (77%), Positives = 237/261 (90%), Gaps = 1/261 (0%)
Query: 4 LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPY-LNHHRVIMFDLVCAGSVNPDYFD 62
LL+AL+VRVVG+G+R+LVLAHGFGTDQSAW RILP+ L +RV+++DLVCAGSVNPD+FD
Sbjct: 5 LLDALNVRVVGSGERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFD 64
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
FRRYTTLD YVDDLL+ILD LG++ CAYVGHSVSAMIG+LASIRRP+LF+KLILIGASPR
Sbjct: 65 FRRYTTLDPYVDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPR 124
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
FLNDEDYHGGFE+ EI+KVF AMEANYEAW G+APLAVGADVPAAVREFSRTLFNMRPD
Sbjct: 125 FLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADVPAAVREFSRTLFNMRPD 184
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
I+LFVS+TVF++D+RG+LGLV+VPC I QT++D SVP SVA YL+ HLGG+NTV L IE
Sbjct: 185 ITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIE 244
Query: 243 GHLPHLSAPAIVGPVIRRALS 263
GHLPHLSAP ++ +RRALS
Sbjct: 245 GHLPHLSAPTLLAQELRRALS 265
|
Source: Petunia x hybrida Species: Petunia x hybrida Genus: Petunia Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|414145488|pdb|4DNP|A Chain A, Crystal Structure Of Dad2 | Back alignment and taxonomy information |
|---|
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/261 (77%), Positives = 237/261 (90%), Gaps = 1/261 (0%)
Query: 4 LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPY-LNHHRVIMFDLVCAGSVNPDYFD 62
LL+AL+VRVVG+G+R+LVLAHGFGTDQSAW RILP+ L +RV+++DLVCAGSVNPD+FD
Sbjct: 7 LLDALNVRVVGSGERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFD 66
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
FRRYTTLD YVDDLL+ILD LG++ CAYVGHSVSAMIG+LASIRRP+LF+KLILIGASPR
Sbjct: 67 FRRYTTLDPYVDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPR 126
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
FLNDEDYHGGFE+ EI+KVF AMEANYEAW G+APLAVGADVPAAVREFSRTLFNMRPD
Sbjct: 127 FLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADVPAAVREFSRTLFNMRPD 186
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
I+LFVS+TVF++D+RG+LGLV+VPC I QT++D SVP SVA YL+ HLGG+NTV L IE
Sbjct: 187 ITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIE 246
Query: 243 GHLPHLSAPAIVGPVIRRALS 263
GHLPHLSAP ++ +RRALS
Sbjct: 247 GHLPHLSAPTLLAQELRRALS 267
|
Source: Petunia x hybrida Species: Petunia x hybrida Genus: Petunia Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|414145489|pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant gi|414145490|pdb|4DNQ|B Chain B, Crystal Structure Of Dad2 S96a Mutant gi|414145491|pdb|4DNQ|C Chain C, Crystal Structure Of Dad2 S96a Mutant gi|414145492|pdb|4DNQ|D Chain D, Crystal Structure Of Dad2 S96a Mutant gi|414145493|pdb|4DNQ|E Chain E, Crystal Structure Of Dad2 S96a Mutant gi|414145494|pdb|4DNQ|F Chain F, Crystal Structure Of Dad2 S96a Mutant gi|414145495|pdb|4DNQ|G Chain G, Crystal Structure Of Dad2 S96a Mutant gi|414145496|pdb|4DNQ|H Chain H, Crystal Structure Of Dad2 S96a Mutant gi|414145497|pdb|4DNQ|I Chain I, Crystal Structure Of Dad2 S96a Mutant gi|414145498|pdb|4DNQ|J Chain J, Crystal Structure Of Dad2 S96a Mutant gi|414145499|pdb|4DNQ|K Chain K, Crystal Structure Of Dad2 S96a Mutant gi|414145500|pdb|4DNQ|L Chain L, Crystal Structure Of Dad2 S96a Mutant | Back alignment and taxonomy information |
|---|
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/261 (77%), Positives = 237/261 (90%), Gaps = 1/261 (0%)
Query: 4 LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPY-LNHHRVIMFDLVCAGSVNPDYFD 62
LL+AL+VRVVG+G+R+LVLAHGFGTDQSAW RILP+ L +RV+++DLVCAGSVNPD+FD
Sbjct: 7 LLDALNVRVVGSGERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFD 66
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
FRRYTTLD YVDDLL+ILD LG++ CAYVGH+VSAMIG+LASIRRP+LF+KLILIGASPR
Sbjct: 67 FRRYTTLDPYVDDLLHILDALGIDCCAYVGHAVSAMIGILASIRRPELFSKLILIGASPR 126
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
FLNDEDYHGGFE+ EI+KVF AMEANYEAW G+APLAVGADVPAAVREFSRTLFNMRPD
Sbjct: 127 FLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADVPAAVREFSRTLFNMRPD 186
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
I+LFVS+TVF++D+RG+LGLV+VPC I QT++D SVP SVA YL+ HLGG+NTV L IE
Sbjct: 187 ITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIE 246
Query: 243 GHLPHLSAPAIVGPVIRRALS 263
GHLPHLSAP ++ +RRALS
Sbjct: 247 GHLPHLSAPTLLAQELRRALS 267
|
Source: Petunia x hybrida Species: Petunia x hybrida Genus: Petunia Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 264 | ||||||
| TAIR|locus:2095913 | 267 | AT3G03990 "AT3G03990" [Arabido | 0.992 | 0.981 | 0.790 | 8.7e-111 | |
| TAIR|locus:2126357 | 270 | KAI2 "KARRIKIN INSENSITIVE 2" | 0.984 | 0.962 | 0.545 | 9e-77 | |
| TAIR|locus:2087213 | 273 | AT3G24420 [Arabidopsis thalian | 0.981 | 0.948 | 0.423 | 4.2e-56 | |
| UNIPROTKB|Q886H5 | 273 | PSPTO_1604 "Hydrolase, putativ | 0.916 | 0.886 | 0.353 | 3.7e-39 | |
| TIGR_CMR|GSU_2628 | 273 | GSU_2628 "non-heme peroxidase, | 0.909 | 0.879 | 0.289 | 5.1e-13 | |
| TAIR|locus:2832896 | 359 | AT5G19850 [Arabidopsis thalian | 0.446 | 0.328 | 0.290 | 8.8e-10 | |
| UNIPROTKB|Q81WT1 | 257 | BAS3601 "Hydrolase, alpha/beta | 0.901 | 0.926 | 0.259 | 1.5e-09 | |
| TIGR_CMR|BA_3887 | 257 | BA_3887 "hydrolase, alpha/beta | 0.901 | 0.926 | 0.259 | 1.5e-09 | |
| UNIPROTKB|J9P770 | 290 | EPHX4 "Uncharacterized protein | 0.409 | 0.372 | 0.315 | 7.1e-09 | |
| UNIPROTKB|O07732 | 462 | lipJ "Probable lignin peroxida | 0.643 | 0.367 | 0.272 | 1.1e-08 |
| TAIR|locus:2095913 AT3G03990 "AT3G03990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
Identities = 208/263 (79%), Positives = 235/263 (89%)
Query: 3 DLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGSVNPDYF 61
++LEAL+VRVVGTGDRIL LAHGFGTDQSAW ILPY ++RV+++DLVCAGSVNPDYF
Sbjct: 5 NILEALNVRVVGTGDRILFLAHGFGTDQSAWHLILPYFTQNYRVVLYDLVCAGSVNPDYF 64
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
DF RYTTLD YVDDLLNI+D+LG+ CAYVGHSVSAMIG++ASIRRP+LF+KLILIG SP
Sbjct: 65 DFNRYTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFSKLILIGFSP 124
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP 181
RFLNDEDYHGGFEE EI+KVF AMEANYEAW +G+APLAVGADVPAAVREFSRTLFNMRP
Sbjct: 125 RFLNDEDYHGGFEEGEIEKVFSAMEANYEAWVHGFAPLAVGADVPAAVREFSRTLFNMRP 184
Query: 182 DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241
DISLFVS+TVF++DLRG+LGLVRVP +IQT+KDVSVP SVAEYL+ HLGG TVE LK
Sbjct: 185 DISLFVSRTVFNSDLRGVLGLVRVPTCVIQTAKDVSVPASVAEYLRSHLGGDTTVETLKT 244
Query: 242 EGHLPHLSAPAIVGPVIRRALSR 264
EGHLP LSAPA + +RRAL R
Sbjct: 245 EGHLPQLSAPAQLAQFLRRALPR 267
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| TAIR|locus:2126357 KAI2 "KARRIKIN INSENSITIVE 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 143/262 (54%), Positives = 204/262 (77%)
Query: 1 MGDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPD 59
MG + EA +V+V+G+G+ +VL HGFGTDQS W+ ++P+L + +RV+++D + AG+ NPD
Sbjct: 1 MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 60
Query: 60 YFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119
YFDF RY+ L+ Y DL+ IL+ L + C +VGHSVSAMIG+LAS+ RPDLF+K+++I A
Sbjct: 61 YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISA 120
Query: 120 SPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPA-AVREFSRTLFN 178
SPR++ND DY GGFE+ +++++F A+ +NY+AW G+APLAVG D+ + AV+EFSRTLFN
Sbjct: 121 SPRYVNDVDYQGGFEQEDLNQLFEAIRSNYKAWCLGFAPLAVGGDMDSIAVQEFSRTLFN 180
Query: 179 MRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238
MRPDI+L V +T+F +D+R IL V VPC I+Q+ KD++VPV V+EYL +LG + VE+
Sbjct: 181 MRPDIALSVGQTIFQSDMRQILPFVTVPCHILQSVKDLAVPVVVSEYLHANLGCESVVEV 240
Query: 239 LKIEGHLPHLSAPAIVGPVIRR 260
+ +GHLP LS+P V PVI R
Sbjct: 241 IPSDGHLPQLSSPDSVIPVILR 262
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| TAIR|locus:2087213 AT3G24420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 111/262 (42%), Positives = 176/262 (67%)
Query: 4 LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHH-RVIMFDLVCAGSVNPD-YF 61
L A++ +++G+G+R +VLAHGFG DQS W +I+P L+ +V++FD + +G++ +
Sbjct: 10 LASAMNAKIIGSGERSMVLAHGFGGDQSVWDKIIPVLSQSFKVLVFDWLFSGAIKDQTLY 69
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
D +Y +LD + DDL+ +++ L +VGHS+S +IG ASI+RPDLFT L+LI ASP
Sbjct: 70 DPSKYNSLDVFSDDLIALMEELKFGPVVFVGHSMSGVIGCAASIKRPDLFTNLLLIAASP 129
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP 181
R++N EDY GGFE +ID + ++ +NYEAWA ++ V + +V+ F ++L M+P
Sbjct: 130 RYINSEDYKGGFESKDIDTIITSIGSNYEAWAVDFSSFVVDSRDSLSVQRFEKSLKKMKP 189
Query: 182 DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241
+ +L ++K VF +D R ILG V VPC +IQ DV VPVSVA ++Q + G++TVE+++
Sbjct: 190 ETALALAKIVFGSDEREILGQVSVPCHVIQPGNDVVVPVSVAYFMQEKIKGKSTVEIIED 249
Query: 242 E-GHLPHLSAPAIVGPVIRRAL 262
GH P +++ + V+RR L
Sbjct: 250 AIGHFPQMTSHLELLGVMRRLL 271
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| UNIPROTKB|Q886H5 PSPTO_1604 "Hydrolase, putative" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 87/246 (35%), Positives = 136/246 (55%)
Query: 9 HVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYT 67
+V ++G G L+ AHGFG DQ W+ + P+ +V++FDLV +G+ + + +Y
Sbjct: 8 NVNIMGDGPATLIFAHGFGCDQHMWRFMAPHFAERFKVVLFDLVGSGNSDVSAWYPHKYA 67
Query: 68 TLDAYVDDLLNILDTL-GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND 126
+L Y DLL + D G ++GHSVS MI +LA ++ P F I++G SP +LND
Sbjct: 68 SLKGYATDLLELADEFAGTGPVVHIGHSVSCMIAVLAELQSPSRFDSHIMVGPSPHYLND 127
Query: 127 EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA-DVPAAVREFSRTLFNMRPDISL 185
DY GGF A++D + +E+NY WA AP +GA D P E + + +I+
Sbjct: 128 GDYLGGFTRADVDSLLETLESNYLGWASTMAPTLMGAGDRPELSEELASSFCRTNAEIAK 187
Query: 186 FVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHL 245
++ F +D R + +I+Q+S D+ VPV V EYL H+ + + ++ GH
Sbjct: 188 QFARVTFLSDHRADVARFNSRTLILQSSDDLVVPVQVGEYLH-HVIADSALHMIDNVGHY 246
Query: 246 PHLSAP 251
PH+SAP
Sbjct: 247 PHMSAP 252
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| TIGR_CMR|GSU_2628 GSU_2628 "non-heme peroxidase, putative" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 182 (69.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 74/256 (28%), Positives = 110/256 (42%)
Query: 16 GDRI-LVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAG-SVNPDYFDFRRYTTLDAYV 73
GD LVL HG+ + W P + RVI DL G S P D Y D +
Sbjct: 18 GDGFPLVLVHGWAMEGGVWAFQRPLASSFRVITVDLRGHGRSTAPG--D--GYGLAD-FA 72
Query: 74 DDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGF 133
D++ + D LG+ R A VG S+ A L A+ D L+L+GA+PRF + + G
Sbjct: 73 ADIVVLFDELGLERAAIVGWSLGAQAALEAAPLLGDRLAALVLVGATPRFSATDGWLHGL 132
Query: 134 EEAEIDKVFRAMEANYEAWAYGY--APLAVGADVPAAVREFSR--TLFNMRPDISLFVSK 189
E + + ++A G+ + A G + R + T RP + +
Sbjct: 133 PATECRGLGLRLRRTFDAALDGFFHSMFAEGELSDESERLIGQEITASWRRPAATAAQAA 192
Query: 190 --TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG-GRNTVELLKIEGHLP 246
T+ ++D R +L +RVP ++I +D P+ +L HL GR L GH P
Sbjct: 193 LVTLAESDQRHLLEKIRVPTLVIHGDRDAICPLEAGAHLADHLPLGRFL--LFAGTGHAP 250
Query: 247 HLSAPAIVGPVIRRAL 262
LS P + R L
Sbjct: 251 FLSRPREFNSEVTRFL 266
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| TAIR|locus:2832896 AT5G19850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 142 (55.0 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 36/124 (29%), Positives = 63/124 (50%)
Query: 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNH-HRVIMFDLVCAG---SVNPDYFD 62
++ + GT LVL HGFG + W++ P L HRV DL+ G NP F
Sbjct: 84 SIRYQCAGTSGPALVLVHGFGANSDHWRKNTPILGKTHRVYSIDLIGYGYSDKPNPREFG 143
Query: 63 FRRYTTLDAYVDDLLNI-LDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
+ T + + + L + LD + + ++ +S+ ++GL A++ +P++ L+LI S
Sbjct: 144 GEPFYTFETWGEQLNDFCLDVVK-DEAFFICNSIGGLVGLQAAVSKPEICRGLMLINISL 202
Query: 122 RFLN 125
R L+
Sbjct: 203 RMLH 206
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| UNIPROTKB|Q81WT1 BAS3601 "Hydrolase, alpha/beta fold family" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 156 (60.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 66/254 (25%), Positives = 106/254 (41%)
Query: 12 VVGTGDRILVLAHGFGTDQSAWQRILPYLNHH-RVIMFDLVCAGSVNPDYFDFRRYTTLD 70
+ G+G IL L HG G + + W Y VI DL G +F+ Y
Sbjct: 14 IEGSGPVILFL-HGLGGNANNWLYQRQYFKKKWTVISLDLPGHGKSEGLEINFKEY---- 68
Query: 71 AYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH 130
V+ L + L + + G S A +G+ +I+ PD + LI++ A P +L ED
Sbjct: 69 --VNVLYELCKYLKLQKVVICGLSKGARVGIDFAIQYPDFVSSLIIVNAFP-YLEPEDRK 125
Query: 131 GGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP-DISLFVSK 189
E ++ ++ N + WA A VR F ++L ++ P I ++
Sbjct: 126 KRLEVYDL----LSLHDNGKKWADTLLEEMGVASNEVIVRGFYQSLQSINPVHIQRLFAE 181
Query: 190 TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS 249
V D D R +L + +II+ D VP +R L +E K GHLP+L
Sbjct: 182 LV-DYDQRPLLLNISCSTLIIRGENDDFVPEKYVREFERRLKNTTFIEF-KNSGHLPYLE 239
Query: 250 APAIVGPVIRRALS 263
P+ + + L+
Sbjct: 240 QPSSFNMTVEKFLN 253
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| TIGR_CMR|BA_3887 BA_3887 "hydrolase, alpha/beta fold family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 156 (60.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 66/254 (25%), Positives = 106/254 (41%)
Query: 12 VVGTGDRILVLAHGFGTDQSAWQRILPYLNHH-RVIMFDLVCAGSVNPDYFDFRRYTTLD 70
+ G+G IL L HG G + + W Y VI DL G +F+ Y
Sbjct: 14 IEGSGPVILFL-HGLGGNANNWLYQRQYFKKKWTVISLDLPGHGKSEGLEINFKEY---- 68
Query: 71 AYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH 130
V+ L + L + + G S A +G+ +I+ PD + LI++ A P +L ED
Sbjct: 69 --VNVLYELCKYLKLQKVVICGLSKGARVGIDFAIQYPDFVSSLIIVNAFP-YLEPEDRK 125
Query: 131 GGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP-DISLFVSK 189
E ++ ++ N + WA A VR F ++L ++ P I ++
Sbjct: 126 KRLEVYDL----LSLHDNGKKWADTLLEEMGVASNEVIVRGFYQSLQSINPVHIQRLFAE 181
Query: 190 TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS 249
V D D R +L + +II+ D VP +R L +E K GHLP+L
Sbjct: 182 LV-DYDQRPLLLNISCSTLIIRGENDDFVPEKYVREFERRLKNTTFIEF-KNSGHLPYLE 239
Query: 250 APAIVGPVIRRALS 263
P+ + + L+
Sbjct: 240 QPSSFNMTVEKFLN 253
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| UNIPROTKB|J9P770 EPHX4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 141 (54.7 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 36/114 (31%), Positives = 58/114 (50%)
Query: 8 LHVRVVGTGDR---ILVLAHGFGTDQSAWQRIL-PYLNHHRVIMFDLVCAGSVNPDYFDF 63
L V G+R +++L HGF +W+ L + + +RV+ DL G +
Sbjct: 9 LRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKSEYRVVALDLRGYGETDAPIH-- 66
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI 117
R LD + D+ +ILD+LG ++C +GH MI L +I P++ KLI+I
Sbjct: 67 RENYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVI 120
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| UNIPROTKB|O07732 lipJ "Probable lignin peroxidase LipJ" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/180 (27%), Positives = 77/180 (42%)
Query: 67 TTLDA--YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
TTL + D + ++D +G + S AM GL+ + P+ LI++ S R L
Sbjct: 82 TTLGPKFWAQDAIAVMDAVGCEQATIFAPSFHAMNGLVLAADYPERVRSLIVVNGSARPL 141
Query: 125 NDEDYHGGFEEAEIDKVFR------AMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFN 178
DY G + D A+E ++ + AP G DV A + +
Sbjct: 142 WAPDYPVGAQVRRADPFLTVALEPDAVERGFDVLSI-VAPTVAGDDVFRAWWDLAGNRAG 200
Query: 179 MRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238
P I+ VSK + + D+R +LG + P +I+ +PV YL H+ G VEL
Sbjct: 201 P-PSIARAVSKVIAEADVRDVLGHIEAPTLILHRVGSTYIPVGHGRYLAEHIAGSRLVEL 259
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O07015 | RSBQ_BACSU | No assigned EC number | 0.3864 | 0.9356 | 0.9182 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00014956001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (266 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 264 | |||
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 8e-26 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 3e-23 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 6e-18 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 1e-12 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 4e-11 | |
| TIGR01738 | 245 | TIGR01738, bioH, pimelyl-[acyl-carrier protein] me | 7e-11 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 3e-10 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 4e-09 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 7e-06 | |
| PLN02824 | 294 | PLN02824, PLN02824, hydrolase, alpha/beta fold fam | 1e-05 | |
| PRK08775 | 343 | PRK08775, PRK08775, homoserine O-acetyltransferase | 1e-04 | |
| PHA02857 | 276 | PHA02857, PHA02857, monoglyceride lipase; Provisio | 3e-04 | |
| TIGR03056 | 278 | TIGR03056, bchO_mg_che_rel, putative magnesium che | 0.001 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 0.004 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 102 bits (254), Expect = 8e-26
Identities = 75/277 (27%), Positives = 102/277 (36%), Gaps = 25/277 (9%)
Query: 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL----NHHRVIMFDLVCAGSVNPDYFD 62
L R G G LVL HGF S W+ + L +RVI DL G +P +
Sbjct: 11 RLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGY- 69
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
+L AY DDL +LD LG+ + VGHS+ + L ++R PD L+LIG +P
Sbjct: 70 -----SLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124
Query: 123 FLNDED-----YHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV----------PA 167
E A D + A + A LA A
Sbjct: 125 PGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAP 184
Query: 168 AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ 227
+ + + D DLR L + VP +II D VP +A L
Sbjct: 185 LLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLA 244
Query: 228 RHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264
L + ++ GH PHL AP + L R
Sbjct: 245 AALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLER 281
|
Length = 282 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 3e-23
Identities = 58/236 (24%), Positives = 84/236 (35%), Gaps = 53/236 (22%)
Query: 20 LVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78
+VL HG G +W+ + L +RV+ DL G R +L+ DL
Sbjct: 1 VVLLHGAGGSAESWRPLAEALAAGYRVLAPDLPGHG---DSDGPPRTPYSLEDDAADLAA 57
Query: 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEI 138
+LD LG+ VGHS+ + L A+ RRP+ L+LI R L +
Sbjct: 58 LLDALGLGPVVLVGHSLGGAVALAAAARRPERVAGLVLISPPLRDLEE------------ 105
Query: 139 DKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRG 198
+ A+ A + AD+ A+
Sbjct: 106 -----LLAADAAALLALLRAALLDADLREALAR--------------------------- 133
Query: 199 ILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIV 254
+ VP ++I D VP A L L G + +L GHLPHL P V
Sbjct: 134 ----LTVPVLVIHGEDDPLVPPEAARRLAEALPG-AELVVLPGAGHLPHLEHPEEV 184
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This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 6e-18
Identities = 65/263 (24%), Positives = 103/263 (39%), Gaps = 20/263 (7%)
Query: 8 LHVRVVG--TGDRILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGS---VNPDYF 61
LH R+ G G +LV + GTD W +LP L RV+ +D G Y
Sbjct: 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPY- 60
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
+++ DD+L +LD LG+ R + G S+ +I + RRPD L+L +
Sbjct: 61 ------SIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAW-AYGYAPLAVGADVPAAVREFSRTLFNMR 180
+ E ++ + + +A E W G+ PA + + L
Sbjct: 115 KIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAH-----PARLDLYRNMLVRQP 169
Query: 181 PDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240
PD + D D R LG + VP + I +D S P + + + G E+
Sbjct: 170 PDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRG 229
Query: 241 IEGHLPHLSAPAIVGPVIRRALS 263
GH+P + P +R L
Sbjct: 230 -AGHIPCVEQPEAFNAALRDFLR 251
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Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 1e-12
Identities = 72/279 (25%), Positives = 104/279 (37%), Gaps = 51/279 (18%)
Query: 8 LHVRVVGTGDRI-LVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRR 65
+ +G GD +VL HGFG D + W L VI DL G+ +
Sbjct: 121 VRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGA--- 177
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
+LD +L LD LG+ R VGHS+ + L + R P L LI +P L
Sbjct: 178 -GSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLI--APAGLG 234
Query: 126 DE---DYHGGFEEA----EIDKVFRAMEANYEAWAYGYAPLAVGAD-------------V 165
E DY GF A E+ V + A+ P V V
Sbjct: 235 PEINGDYIDGFVAAESRRELKPVLELLFAD---------PALVTRQMVEDLLKYKRLDGV 285
Query: 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEY 225
A+R + LF DLR L + +P ++I +D +P + A+
Sbjct: 286 DDALRALADALF--AGGRQRV--------DLRDRLASLAIPVLVIWGEQDRIIPAAHAQ- 334
Query: 226 LQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264
L V +L GH+P + A A V ++ L +
Sbjct: 335 ---GLPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370
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Length = 371 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 4e-11
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 19 ILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL 77
+LV HGF + WQ ++ L H R + DL GS + D RY + L
Sbjct: 4 VLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGS-SQSPSDIERYDFEEIAQLLLA 62
Query: 78 NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP----------RFLNDE 127
+LD LG+ VG+S+ I L +++ P+ LIL SP R NDE
Sbjct: 63 TLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDE 122
Query: 128 DYHGGFEEAEIDKV 141
FE+ I+
Sbjct: 123 QLAQRFEQEGIEAF 136
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|130799 TIGR01738, bioH, pimelyl-[acyl-carrier protein] methyl ester esterase | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 7e-11
Identities = 54/250 (21%), Positives = 94/250 (37%), Gaps = 26/250 (10%)
Query: 14 GTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLD-- 70
G G+ LVL HG+G + ++ + L H + + DL P + R + L
Sbjct: 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDL-------PGHGRSRGFGPLSLA 53
Query: 71 AYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH 130
+ + + ++G S+ ++ L + PD L+ + +SP F ED+
Sbjct: 54 DAAEAIAAQAPDPAI----WLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWP 109
Query: 131 GGFEEAEIDKVFRAMEANYEAWAYGYAPL-AVGA-DVPAAVREFSRTLFNMRPDISLFVS 188
G + + + + +Y+ + L +G R +TL RP ++ V
Sbjct: 110 EGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTL-LARPTPNVQVL 168
Query: 189 KTVFD----TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE-- 242
+ + DLR L + VP + + D VP V YL + EL
Sbjct: 169 QAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHS---ELYIFAKA 225
Query: 243 GHLPHLSAPA 252
H P LS
Sbjct: 226 AHAPFLSHAE 235
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (Pfam model pfam00561). Members of this family are restricted to the Proteobacteria [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 245 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 3e-10
Identities = 51/229 (22%), Positives = 79/229 (34%), Gaps = 18/229 (7%)
Query: 43 HRVIMFDL--VCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIG 100
VI FDL S D+ D+R D +DL +LD LG+++ VGHS+ +I
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYR----FDDLAEDLEALLDALGLDKVNLVGHSMGGLIA 56
Query: 101 LLASIRRPDLFTKLILIGASPRFL--NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP 158
L + + PD L+L+G + G +D F + + EA
Sbjct: 57 LAYAAKYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRAIK 116
Query: 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRG---------ILGLVRVPCVI 209
P + + ++ G L + VP +I
Sbjct: 117 QFQALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALKDIDVPTLI 176
Query: 210 IQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVI 258
I D VP +E L + ++ GHL L P V +I
Sbjct: 177 IWGDDDPLVPPDASEKLAALF-PNAQLVVIDDAGHLAQLEKPDEVAELI 224
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 4e-09
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGS----VNPDYFDFRRYTTLD 70
++VL+ G G S W L L V+ +D G + PDY ++
Sbjct: 11 DAPVVVLSSGLGGSGSYWAPQLAVLTQRFHVVTYDHRGTGRSPGELPPDY-------SIA 63
Query: 71 AYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119
DD+L +LD LG+ R +VGH++ +IGL ++ P+ T L+LI
Sbjct: 64 HMADDVLQLLDALGIERFHFVGHALGGLIGLQLALDYPERLTSLVLING 112
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 7e-06
Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 14/110 (12%)
Query: 20 LVLAHGFGTDQSAWQRILPYLNHH--RVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL 77
+VL HG G D A+ + L V+ D P + +A + D
Sbjct: 2 VVLLHGAGGDPEAYAPLARALASRGYNVVAVDY-------PGHGASLGAPDAEAVLADAP 54
Query: 78 NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE 127
L R VGHS+ + LL + R P + ++L P D+
Sbjct: 55 -----LDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALDD 99
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|178419 PLN02824, PLN02824, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-05
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 20 LVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFRRYT--TLDAYVDD 75
LVL HGFG + W++ P L HRV DL+ G S P+ + T + + +
Sbjct: 32 LVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQ 91
Query: 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
L + + + + +SV ++GL A++ P+L ++LI S R L
Sbjct: 92 LNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGL 140
|
Length = 294 |
| >gnl|CDD|181553 PRK08775, PRK08775, homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 40 LNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRC-AYVGHSVSAM 98
R++ FD + A D T D D + +LD LG+ R A+VG+S A+
Sbjct: 97 PARFRLLAFDFIGADGSLDVPID-----TADQ-ADAIALLLDALGIARLHAFVGYSYGAL 150
Query: 99 IGLLASIRRPDLFTKLILIGASPR 122
+GL + R P L+++ + R
Sbjct: 151 VGLQFASRHPARVRTLVVVSGAHR 174
|
Length = 343 |
| >gnl|CDD|165193 PHA02857, PHA02857, monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 3e-04
Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 49/252 (19%)
Query: 19 ILVLAHGFGTDQSAWQRILPYLNHHRVIMF--DLVCAGSVNPDYFDFRRYTTLDAYVDDL 76
++ ++HG G ++ + ++ +++F D + G N + YV D+
Sbjct: 27 LVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMI---DDFGVYVRDV 83
Query: 77 L---NILDTLGVNRCAYV-GHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED---- 128
+ + + ++ GHS+ A I +LA+ + P+LFT +IL+ SP +N E
Sbjct: 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILM--SP-LVNAEAVPRL 140
Query: 129 -------YHGGFEEAEIDK-----VFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTL 176
+ + K V R M+ Y Y Y PL + A
Sbjct: 141 NLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVY---KYQYDPLVNHEKIKAG-------- 189
Query: 177 FNMRPDISLFVSKTVFDTD-LRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT 235
F S+ + T+ +R I+ ++ P +I+Q + + VS A Y +H
Sbjct: 190 ---------FASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNRE 240
Query: 236 VELLKIEGHLPH 247
+++ + H H
Sbjct: 241 IKIYEGAKHHLH 252
|
Length = 276 |
| >gnl|CDD|132100 TIGR03056, bchO_mg_che_rel, putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.001
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 9 HVRVVGTGD-RILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGSVNPDYFDFRRY 66
HV+ +G +L+L HG G +W+ ++P L RV+ DL G FR
Sbjct: 19 HVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAP---FRFR 75
Query: 67 TTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL 101
TL + +DL + G++ +GHS A I L
Sbjct: 76 FTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIAL 110
|
Members of this family belong to the alpha/beta fold family hydrolases (pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity [Energy metabolism, Photosynthesis]. Length = 278 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.004
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 8 LHVRVVGTGDR-ILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFR 64
L V G DR +VL HG+ + W + P L + RV+ +D+ AG S P
Sbjct: 15 LAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAP---KRT 71
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYV-GH 93
TL DD ++D + +R ++ H
Sbjct: 72 AAYTLARLADDFAAVIDAVSPDRPVHLLAH 101
|
Length = 582 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 264 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 100.0 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PRK07581 | 339 | hypothetical protein; Validated | 100.0 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 100.0 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 100.0 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 100.0 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 100.0 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 100.0 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 100.0 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 100.0 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 100.0 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 100.0 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.98 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.97 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.97 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.97 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.97 | |
| PLN02511 | 388 | hydrolase | 99.97 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.97 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.97 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.96 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.95 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.95 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.95 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.95 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.94 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.94 | |
| PRK10566 | 249 | esterase; Provisional | 99.93 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.93 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.93 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.92 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.92 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.91 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.91 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.9 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.9 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.89 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.89 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.88 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.88 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.87 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.87 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.86 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.85 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.85 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.85 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.84 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.84 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.83 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.83 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.82 | |
| PLN00021 | 313 | chlorophyllase | 99.82 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.8 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.79 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.79 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.78 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.78 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.78 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.78 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.76 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.75 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.75 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.74 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.74 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.74 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.73 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.73 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.72 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.71 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.71 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.7 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.69 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.66 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.66 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.66 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.65 | |
| PRK10115 | 686 | protease 2; Provisional | 99.65 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.64 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.58 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.58 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.58 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.58 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.56 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.56 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.54 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.52 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.51 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.5 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.48 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.44 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.44 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.43 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.42 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.42 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.38 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 99.37 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.37 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.36 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.35 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.34 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.34 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.33 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.32 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.31 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.3 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 99.29 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.28 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.28 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.23 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 99.18 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.18 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.17 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 99.15 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 99.14 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 99.09 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 99.08 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.06 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 99.06 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.06 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 99.05 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.97 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.97 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.94 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.94 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.91 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.9 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.9 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.89 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.89 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.86 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.76 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.76 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.74 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.7 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.66 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.65 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.63 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.63 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.55 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.51 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.47 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.47 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 98.45 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.44 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 98.42 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.38 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 98.38 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 98.31 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 98.28 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 98.23 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.21 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.19 | |
| PLN02209 | 437 | serine carboxypeptidase | 98.15 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 98.15 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 98.13 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.05 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 98.05 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 97.98 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.96 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 97.89 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.89 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 97.87 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.86 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.78 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 97.72 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.7 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.69 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 97.68 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.64 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 97.61 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.61 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.61 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 97.57 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 97.57 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 97.35 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.31 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 97.17 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 97.1 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 97.07 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 97.04 | |
| PLN02162 | 475 | triacylglycerol lipase | 97.02 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.99 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 96.97 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 96.97 | |
| PLN00413 | 479 | triacylglycerol lipase | 96.94 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.74 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 96.74 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.73 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.72 | |
| PLN02408 | 365 | phospholipase A1 | 96.51 | |
| PLN02310 | 405 | triacylglycerol lipase | 96.43 | |
| PLN02934 | 515 | triacylglycerol lipase | 96.32 | |
| PLN02324 | 415 | triacylglycerol lipase | 96.19 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 96.16 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 96.05 | |
| PLN02847 | 633 | triacylglycerol lipase | 96.05 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 95.95 | |
| PLN02802 | 509 | triacylglycerol lipase | 95.95 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 95.93 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.9 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.8 | |
| PLN02719 | 518 | triacylglycerol lipase | 95.68 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 95.65 | |
| PLN02761 | 527 | lipase class 3 family protein | 95.62 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 95.19 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 94.29 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 94.28 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 94.0 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 93.5 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 92.78 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 91.96 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 91.96 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 91.81 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 89.36 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 89.15 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 88.55 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 87.92 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 87.81 | |
| PF00698 | 318 | Acyl_transf_1: Acyl transferase domain; InterPro: | 83.75 | |
| smart00827 | 298 | PKS_AT Acyl transferase domain in polyketide synth | 83.34 | |
| TIGR03131 | 295 | malonate_mdcH malonate decarboxylase, epsilon subu | 82.78 | |
| cd07198 | 172 | Patatin Patatin-like phospholipase. Patatin is a s | 80.51 | |
| PRK10279 | 300 | hypothetical protein; Provisional | 80.49 | |
| cd07225 | 306 | Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai | 80.47 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=246.07 Aligned_cols=253 Identities=22% Similarity=0.280 Sum_probs=171.8
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCC----CcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFD----FRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~ 81 (264)
.++|...|+++|+|||+||+++++..|..+++.| ..|+|+++|+||||.|+..... ...| +++++++|+.++++
T Consensus 19 ~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~-~~~~~a~~l~~~l~ 97 (294)
T PLN02824 19 NIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFY-TFETWGEQLNDFCS 97 (294)
T ss_pred EEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccC-CHHHHHHHHHHHHH
Confidence 5788888864579999999999999999999999 8899999999999999754211 1235 49999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh--hhhh-------
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN--YEAW------- 152 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------- 152 (264)
.++.++++|+||||||.+++.+|.++|++|+++|++++........... .........+...+... ...+
T Consensus 98 ~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (294)
T PLN02824 98 DVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQP-WLGRPFIKAFQNLLRETAVGKAFFKSVATP 176 (294)
T ss_pred HhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccc-hhhhHHHHHHHHHHhchhHHHHHHHhhcCH
Confidence 9999999999999999999999999999999999999864322111110 11111111111111000 0000
Q ss_pred --hhhcccccCCC---CChHHHHHHHHhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcchhhHH
Q 024681 153 --AYGYAPLAVGA---DVPAAVREFSRTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAE 224 (264)
Q Consensus 153 --~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 224 (264)
...+....+.. ...+..+.+.... ..+.......... ........+.++++|+++|+|++|.++|.+.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 254 (294)
T PLN02824 177 ETVKNILCQCYHDDSAVTDELVEAILRPG--LEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGR 254 (294)
T ss_pred HHHHHHHHHhccChhhccHHHHHHHHhcc--CCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHH
Confidence 00000000100 0111111111100 1111111111111 111223457889999999999999999999999
Q ss_pred HHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 225 YLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+.+..++ +++++++++||+++.|+|+++.+.|.+|+++
T Consensus 255 ~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 255 AYANFDAV-EDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred HHHhcCCc-cceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 98888777 7999999999999999999999999999974
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=239.41 Aligned_cols=247 Identities=19% Similarity=0.327 Sum_probs=170.4
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
..++|...|+++|+|||+||++++...|..+.+.| ++|+|+++|+||||.|+.. ..+ +++++++++.+ +.
T Consensus 2 ~~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~----~~~-~~~~~~~~l~~----~~ 72 (256)
T PRK10349 2 NNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGF----GAL-SLADMAEAVLQ----QA 72 (256)
T ss_pred CccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCC----CCC-CHHHHHHHHHh----cC
Confidence 35789999988778999999999999999999999 8999999999999999743 234 37777777653 45
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccc-cCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPL-AVGA 163 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 163 (264)
.++++++||||||.+|+.+|.++|++|+++|++++++.......+.. ........+...+..........+... ....
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPG-IKPDVLAGFQQQLSDDFQRTVERFLALQTMGT 151 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCc-ccHHHHHHHHHHHHhchHHHHHHHHHHHHccC
Confidence 68999999999999999999999999999999998655432222211 111111111111111111111111100 0111
Q ss_pred C-ChHHHHHHHHhhcccC-c--hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEe
Q 024681 164 D-VPAAVREFSRTLFNMR-P--DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELL 239 (264)
Q Consensus 164 ~-~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 239 (264)
. .......+........ + .............+....+.++++|+++++|++|.++|.+..+.+.+.+++ ++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~-~~~~~i 230 (256)
T PRK10349 152 ETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIF 230 (256)
T ss_pred chHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCC-CeEEEe
Confidence 1 1111112222111111 1 111111122234456677889999999999999999999999999999999 899999
Q ss_pred cCCCCcccccChhcHHHHHHHHhc
Q 024681 240 KIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 240 ~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++||++++|+|++|.+.+.+|-+
T Consensus 231 ~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 231 AKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999999999854
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=240.64 Aligned_cols=247 Identities=15% Similarity=0.160 Sum_probs=167.6
Q ss_pred eeEEEEe--CCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVV--GTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~--g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+++|... ++++++|||+||++++...|..+++.| ++|+|+++|+||||.|+.+ ...+ +++++++++.++++.+
T Consensus 13 ~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~---~~~~-~~~~~~~~~~~~i~~l 88 (276)
T TIGR02240 13 SIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTP---RHPY-RFPGLAKLAARMLDYL 88 (276)
T ss_pred EEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCC---CCcC-cHHHHHHHHHHHHHHh
Confidence 5777664 335579999999999999999999999 9999999999999999754 2345 4999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhh--hhhhhhcccccC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANY--EAWAYGYAPLAV 161 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 161 (264)
+.++++|+||||||.+++.+|.++|++|+++|+++++............ ............... ......+.. ..
T Consensus 89 ~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 165 (276)
T TIGR02240 89 DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKV--LMMMASPRRYIQPSHGIHIAPDIYGG-AF 165 (276)
T ss_pred CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhH--HHHhcCchhhhccccccchhhhhccc-ee
Confidence 9999999999999999999999999999999999987542111110000 000000000000000 000000000 00
Q ss_pred CCCChHHHHHHHHhhcccCch-hhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec
Q 024681 162 GADVPAAVREFSRTLFNMRPD-ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (264)
.. .................. ...... .....+....+.++++|+++|+|++|.++|++..+++.+.+++ +++++++
T Consensus 166 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~-~~~~~i~ 242 (276)
T TIGR02240 166 RR-DPELAMAHASKVRSGGKLGYYWQLF-AGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPN-AELHIID 242 (276)
T ss_pred ec-cchhhhhhhhhcccCCCchHHHHHH-HHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC-CEEEEEc
Confidence 00 111111111111111100 011111 1112222355788999999999999999999999999999998 8999998
Q ss_pred CCCCcccccChhcHHHHHHHHhcC
Q 024681 241 IEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+||+++.|+|+++++.|.+|+++
T Consensus 243 -~gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 243 -DGHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred -CCCchhhccHHHHHHHHHHHHHH
Confidence 59999999999999999999863
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=239.42 Aligned_cols=252 Identities=17% Similarity=0.207 Sum_probs=167.3
Q ss_pred eeEEEEeCCC-----CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 7 ALHVRVVGTG-----DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 7 ~~~~~~~g~~-----~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
+++|.+.|++ .|+|||+||++++...|..++..| ++|+|+++|+||||.|+.+. ...|+ ++++++++.+++
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~--~~~~~-~~~~a~~l~~~l 149 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPP--GFSYT-METWAELILDFL 149 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCC--Ccccc-HHHHHHHHHHHH
Confidence 7889988865 479999999999999999999999 99999999999999997642 13454 999999999999
Q ss_pred HHhCCCeEEEEecChhHHHHHHHHH-hCCCccceeEEecCCCCCCCCCCCCCCccHH--HHHHHHHHH------H----h
Q 024681 81 DTLGVNRCAYVGHSVSAMIGLLASI-RRPDLFTKLILIGASPRFLNDEDYHGGFEEA--EIDKVFRAM------E----A 147 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~----~ 147 (264)
+.++.++++|+||||||.+++.++. .+|++|+++|++++................. ........+ . .
T Consensus 150 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (360)
T PLN02679 150 EEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFN 229 (360)
T ss_pred HHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHH
Confidence 9999999999999999999999887 4799999999999864322111000000000 000000000 0 0
Q ss_pred h--hhhhhhhcccccCCC---CChHHHHHHHHhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcc
Q 024681 148 N--YEAWAYGYAPLAVGA---DVPAAVREFSRTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVP 219 (264)
Q Consensus 148 ~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 219 (264)
. .......+....+.. ..+...+.+..... .......+.... ...+....+.++++|+|+|+|++|.++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p 307 (360)
T PLN02679 230 RVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPAD--DEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTP 307 (360)
T ss_pred HhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhcc--CCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcC
Confidence 0 000000000000000 01112211111111 111111111111 1223345678899999999999999998
Q ss_pred hhh-----HHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 220 VSV-----AEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 220 ~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+. .+.+.+.+++ +++++++++||+++.|+|+++++.|.+||++
T Consensus 308 ~~~~~~~~~~~l~~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 308 LDGPVGKYFSSLPSQLPN-VTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred chhhHHHHHHhhhccCCc-eEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 763 3456677888 8999999999999999999999999999964
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=234.72 Aligned_cols=247 Identities=18% Similarity=0.273 Sum_probs=165.7
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
+++|...|++ |+|||+||++++...|+.+++.| +.++|+++|+||||.|+.+. ..|+ ++++++|+.+++++++.
T Consensus 18 ~i~y~~~G~g-~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~---~~~~-~~~~a~dl~~ll~~l~~ 92 (295)
T PRK03592 18 RMAYIETGEG-DPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPD---IDYT-FADHARYLDAWFDALGL 92 (295)
T ss_pred EEEEEEeCCC-CEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCC---CCCC-HHHHHHHHHHHHHHhCC
Confidence 5889999965 69999999999999999999999 77899999999999997652 3464 99999999999999999
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhh---------hhhhhhc
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANY---------EAWAYGY 156 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 156 (264)
++++++||||||.+|+.+|.++|++|+++|++++.......... .. ........+.... ......+
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDF----PP-AVRELFQALRSPGEGEEMVLEENVFIERV 167 (295)
T ss_pred CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhc----ch-hHHHHHHHHhCcccccccccchhhHHhhc
Confidence 99999999999999999999999999999999984321110000 00 0111111111000 0001111
Q ss_pred ccccC-CCCChHHHHHHHHhhcccCc-hhhhhhhhhh-----------cCCccccccCCcccCEEEEecCCCCCcchhhH
Q 024681 157 APLAV-GADVPAAVREFSRTLFNMRP-DISLFVSKTV-----------FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA 223 (264)
Q Consensus 157 ~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 223 (264)
..... ....++....+...+..... .....+.... ...+....+.++++|+|+|+|++|.++++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 247 (295)
T PRK03592 168 LPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAI 247 (295)
T ss_pred ccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHH
Confidence 11111 11111122222211111000 0000000000 01122345678899999999999999955444
Q ss_pred HH-HHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 224 EY-LQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 224 ~~-~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+ +.+..++ +++++++++||+++.|+|+++++.|.+|+++
T Consensus 248 ~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~ 288 (295)
T PRK03592 248 RDWCRSWPNQ-LEITVFGAGLHFAQEDSPEEIGAAIAAWLRR 288 (295)
T ss_pred HHHHHHhhhh-cceeeccCcchhhhhcCHHHHHHHHHHHHHH
Confidence 44 4556677 8999999999999999999999999999863
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=233.30 Aligned_cols=246 Identities=15% Similarity=0.132 Sum_probs=164.5
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|.+.|+ .+|+|||+||++++...|..+++.| .||+|+++|+||||.|+++.. ...|+ ++++++|+.+++++
T Consensus 34 ~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~-~~~~~-~~~~a~~l~~~l~~ 111 (302)
T PRK00870 34 LRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTR-REDYT-YARHVEWMRSWFEQ 111 (302)
T ss_pred EEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCC-cccCC-HHHHHHHHHHHHHH
Confidence 4689999886 3579999999999999999999999 589999999999999975421 23454 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh----hhhhhhhhccc
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA----NYEAWAYGYAP 158 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 158 (264)
++.++++++||||||.+++.+|.++|++|+++|++++.......... ............ ....+...
T Consensus 112 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--- 182 (302)
T PRK00870 112 LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMP------DAFWAWRAFSQYSPVLPVGRLVNG--- 182 (302)
T ss_pred cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccch------HHHhhhhcccccCchhhHHHHhhc---
Confidence 99999999999999999999999999999999999874221110000 000000000000 00000000
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhh-----------cCCccccccCCcccCEEEEecCCCCCcchhhHHHHH
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTV-----------FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ 227 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 227 (264)
........+....+................... ........+.++++|+++|+|++|.++|... +.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~ 261 (302)
T PRK00870 183 GTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQ 261 (302)
T ss_pred cccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHH
Confidence 000000011111110000000000000000000 0011224467899999999999999999766 8899
Q ss_pred HHcCCCce---EEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 228 RHLGGRNT---VELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 228 ~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+.+++ .+ +.+++++||+++.|+|+++.+.|.+||++
T Consensus 262 ~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 262 KRIPG-AAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred hhccc-ccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 99987 55 78999999999999999999999999964
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=227.27 Aligned_cols=247 Identities=26% Similarity=0.428 Sum_probs=173.3
Q ss_pred eeEEEEeCC--CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGT--GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+++|...|+ ++|+||++||++.+...|..+++.| ++|+|+++|+||||.|+.. ...+ +++++++++.++++.+
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~---~~~~-~~~~~~~~~~~~i~~~ 76 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAP---EGPY-SIEDLADDVLALLDHL 76 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCC---CCCC-CHHHHHHHHHHHHHHh
Confidence 367888886 4689999999999999999999999 9999999999999999653 2344 4999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHH-HHHhhhhhhhhhcccccCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFR-AMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 162 (264)
+.++++++|||+||.+++.+|.++|++++++|++++.........+... ...... ............+......
T Consensus 77 ~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (251)
T TIGR02427 77 GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNAR-----IAAVRAEGLAALADAVLERWFTPGFR 151 (251)
T ss_pred CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHH-----HhhhhhccHHHHHHHHHHHHcccccc
Confidence 9899999999999999999999999999999999875432211111000 000000 0000000000111111111
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCC
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (264)
.........+......................+....+.++++|+++++|++|.++|.+..+.+.+.+++ .+++.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~ 230 (251)
T TIGR02427 152 EAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG-ARFAEIRGA 230 (251)
T ss_pred cCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC-ceEEEECCC
Confidence 1111122222222222222222222222333445566778899999999999999999999999999998 899999999
Q ss_pred CCcccccChhcHHHHHHHHhc
Q 024681 243 GHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 243 gH~~~~~~~~~~~~~i~~fl~ 263 (264)
||+++.++|+++.+.+.+|++
T Consensus 231 gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 231 GHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCcccccChHHHHHHHHHHhC
Confidence 999999999999999999984
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=224.80 Aligned_cols=239 Identities=20% Similarity=0.315 Sum_probs=163.6
Q ss_pred CCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEe
Q 024681 14 GTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVG 92 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 92 (264)
|+++|+|||+||++++...|..+++.| ++|+|+++|+||+|.|... ..+ +++++++++.+.++ ++++++|
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~----~~~-~~~~~~~~~~~~~~----~~~~lvG 71 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGF----GPL-SLADAAEAIAAQAP----DPAIWLG 71 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCC----CCc-CHHHHHHHHHHhCC----CCeEEEE
Confidence 456679999999999999999999999 9999999999999998653 223 47888877765442 6999999
Q ss_pred cChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc-ccCC-CCChHHHH
Q 024681 93 HSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP-LAVG-ADVPAAVR 170 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~ 170 (264)
|||||.+++.+|.++|++++++|++++.+.......+...........+..............+.. .... ........
T Consensus 72 ~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (245)
T TIGR01738 72 WSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDAR 151 (245)
T ss_pred EcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHH
Confidence 999999999999999999999999998765433332322222222222211111111111111100 0001 11111111
Q ss_pred HHHHhhccc-Cc--hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccc
Q 024681 171 EFSRTLFNM-RP--DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPH 247 (264)
Q Consensus 171 ~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 247 (264)
.+...+... .+ .............+....+.++++|+++++|++|.++|.+..+.+.+.+++ +++.+++++||+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~ 230 (245)
T TIGR01738 152 ALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH-SELYIFAKAAHAPF 230 (245)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCC-CeEEEeCCCCCCcc
Confidence 121211111 11 122222233334455566788999999999999999999999999999998 89999999999999
Q ss_pred ccChhcHHHHHHHHh
Q 024681 248 LSAPAIVGPVIRRAL 262 (264)
Q Consensus 248 ~~~~~~~~~~i~~fl 262 (264)
+|+|+++++.|.+|+
T Consensus 231 ~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 231 LSHAEAFCALLVAFK 245 (245)
T ss_pred ccCHHHHHHHHHhhC
Confidence 999999999999986
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=231.38 Aligned_cols=248 Identities=19% Similarity=0.288 Sum_probs=170.1
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
.++|...|++ |+||++||++++...|..+++.| ++|+|+++|+||||.|+.+ ...|+ .+.+++++.++++.+..
T Consensus 77 ~i~Y~~~g~g-~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~---~~~~~-~~~~a~~l~~~i~~~~~ 151 (354)
T PLN02578 77 KIHYVVQGEG-LPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKA---LIEYD-AMVWRDQVADFVKEVVK 151 (354)
T ss_pred EEEEEEcCCC-CeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCc---ccccC-HHHHHHHHHHHHHHhcc
Confidence 5788888866 68999999999999999999999 9999999999999999864 34565 88999999999999988
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCC-------ccHH----HHHHHHHHHHhhh-----
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG-------FEEA----EIDKVFRAMEANY----- 149 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-------~~~~----~~~~~~~~~~~~~----- 149 (264)
++++++|||+||.+++.+|.++|++|+++|++++.+.+......... .... .............
T Consensus 152 ~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T PLN02578 152 EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQA 231 (354)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999986544322111000 0000 0000000000000
Q ss_pred --hhhhhhcccccCCCC--ChH-HHHHHHHhhcccCchhh---hhhhhhh----cCCccccccCCcccCEEEEecCCCCC
Q 024681 150 --EAWAYGYAPLAVGAD--VPA-AVREFSRTLFNMRPDIS---LFVSKTV----FDTDLRGILGLVRVPCVIIQTSKDVS 217 (264)
Q Consensus 150 --~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~ 217 (264)
...........+... ..+ ..+.... ...++... ....... ...+..+.++++++|+++|+|++|.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~ 309 (354)
T PLN02578 232 KQPSRIESVLKSVYKDKSNVDDYLVESITE--PAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPW 309 (354)
T ss_pred cCHHHHHHHHHHhcCCcccCCHHHHHHHHh--cccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCC
Confidence 000000000000000 001 1111111 01111111 1111111 12334556788999999999999999
Q ss_pred cchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 218 VPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+|.+..+.+.+.+++ .+++++ ++||+++.|+|+++++.|.+|++
T Consensus 310 v~~~~~~~l~~~~p~-a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 310 VGPAKAEKIKAFYPD-TTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCHHHHHHHHHhCCC-CEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999998 788888 49999999999999999999986
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=226.92 Aligned_cols=246 Identities=22% Similarity=0.362 Sum_probs=169.1
Q ss_pred eEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 8 LHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 8 ~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
++|...|+ ++|+||++||++++...|..+++.| ++|+|+++|+||||.|.... ...++ ++++++++.++++.+
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~-~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGEL--PPGYS-IAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCC--cccCC-HHHHHHHHHHHHHHh
Confidence 46777774 5689999999999999999999999 99999999999999997532 24454 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh-hhhhhhh-----cc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN-YEAWAYG-----YA 157 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~ 157 (264)
+.++++++||||||.+++.+|.++|++++++|++++........ ..........+... ...+... +.
T Consensus 78 ~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (257)
T TIGR03611 78 NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHT-------RRCFDVRIALLQHAGPEAYVHAQALFLYP 150 (257)
T ss_pred CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhH-------HHHHHHHHHHHhccCcchhhhhhhhhhcc
Confidence 99999999999999999999999999999999998753321100 00000000000000 0000000 00
Q ss_pred cccCCCCChHHHHHHHHhhccc-CchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE
Q 024681 158 PLAVGADVPAAVREFSRTLFNM-RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 236 (264)
...................... ...............+....+.++++|+++++|++|.++|++.++.+.+.+++ .++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~ 229 (257)
T TIGR03611 151 ADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPN-AQL 229 (257)
T ss_pred ccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCC-ceE
Confidence 0000000000000000000000 11111111122233445566788899999999999999999999999999998 899
Q ss_pred EEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 237 ELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+.++++||+++.++|+++.+.|.+||++
T Consensus 230 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 230 KLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999974
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=226.17 Aligned_cols=247 Identities=15% Similarity=0.196 Sum_probs=163.5
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHh---hhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRI---LPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~---~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
..++|...|++ |+||++||++.+...|..+ +..+ .+|+|+++|+||||.|+....+ ... ....++++.+++
T Consensus 20 ~~~~y~~~g~~-~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~~~-~~~~~~~l~~~l 95 (282)
T TIGR03343 20 FRIHYNEAGNG-EAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMD--EQR-GLVNARAVKGLM 95 (282)
T ss_pred eeEEEEecCCC-CeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCc--ccc-cchhHHHHHHHH
Confidence 46889988865 6899999999888777643 3344 7899999999999999754211 111 225688999999
Q ss_pred HHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH----hhhhhhhhhc
Q 024681 81 DTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME----ANYEAWAYGY 156 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 156 (264)
+.++.++++++||||||.+++.+|.++|++++++|++++...... .................. .....+...
T Consensus 96 ~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (282)
T TIGR03343 96 DALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPS---LFAPMPMEGIKLLFKLYAEPSYETLKQMLNV- 171 (282)
T ss_pred HHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcc---ccccCchHHHHHHHHHhcCCCHHHHHHHHhh-
Confidence 999999999999999999999999999999999999997532111 000011111111111110 001111100
Q ss_pred ccccCCC--CChHHHHHHHHhhcccCchhhhhhhh-----hhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHH
Q 024681 157 APLAVGA--DVPAAVREFSRTLFNMRPDISLFVSK-----TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRH 229 (264)
Q Consensus 157 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 229 (264)
..... ......+........ .+........ .....+....++++++|+++++|++|.+++++.++++++.
T Consensus 172 --~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~ 248 (282)
T TIGR03343 172 --FLFDQSLITEELLQGRWENIQR-QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWN 248 (282)
T ss_pred --CccCcccCcHHHHHhHHHHhhc-CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHh
Confidence 00000 011111111111111 1111111110 0112233456788999999999999999999999999999
Q ss_pred cCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 230 LGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 230 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++ +++++++++||+++.|+|+++.+.|.+||+.
T Consensus 249 ~~~-~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 249 MPD-AQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred CCC-CEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 999 8999999999999999999999999999963
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=226.50 Aligned_cols=244 Identities=17% Similarity=0.193 Sum_probs=160.9
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
+++|...|++ |+|||+||++.+...|..+.+.| ++|+|+++|+||||.|+.+. ...|+ ++++++++.+++++++.
T Consensus 25 ~i~y~~~G~~-~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~-~~~~~~~~~~~~~~~~~ 100 (286)
T PRK03204 25 RIHYIDEGTG-PPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPS--GFGYQ-IDEHARVIGEFVDHLGL 100 (286)
T ss_pred EEEEEECCCC-CEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCC--ccccC-HHHHHHHHHHHHHHhCC
Confidence 5788888875 68999999999999999999999 89999999999999997542 12354 89999999999999999
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHH--Hh---hhhhhhhhccccc
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAM--EA---NYEAWAYGYAPLA 160 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~ 160 (264)
++++++||||||.+++.++..+|++|+++|++++.... . . ......+....... .. ....+...+....
T Consensus 101 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~-~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (286)
T PRK03204 101 DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWP-A-D----TLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAG 174 (286)
T ss_pred CCEEEEEECccHHHHHHHHHhChhheeEEEEECccccC-C-C----chhHHHHHHHhccccchhhhhhhhHHHHHhcccc
Confidence 99999999999999999999999999999998764211 0 0 00000000000000 00 0000111111110
Q ss_pred C-CCCChHHHHHHHHhhcccCchhhhhhh---hhhc--C---CccccccC--CcccCEEEEecCCCCCcchh-hHHHHHH
Q 024681 161 V-GADVPAAVREFSRTLFNMRPDISLFVS---KTVF--D---TDLRGILG--LVRVPCVIIQTSKDVSVPVS-VAEYLQR 228 (264)
Q Consensus 161 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~---~~~~~~~~--~i~~P~l~i~g~~D~~~~~~-~~~~~~~ 228 (264)
. ..........+.. .. ..+....... .... . .+....+. .+++|+++|+|++|.++++. ..+.+.+
T Consensus 175 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~ 252 (286)
T PRK03204 175 TEHRPSSAVMAHYRA-VQ-PNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRA 252 (286)
T ss_pred ccCCCCHHHHHHhcC-CC-CCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHH
Confidence 1 1111111111111 00 0000000000 0000 0 00001111 12899999999999988654 5788999
Q ss_pred HcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 229 HLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 229 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+++ .++++++++||++++|+|+++++.|.+||.
T Consensus 253 ~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 253 TFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred hcCC-CeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 9999 899999999999999999999999999984
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=214.78 Aligned_cols=257 Identities=20% Similarity=0.255 Sum_probs=172.5
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|.+.|+ +.|.|+++||++....+|+.....| .||+|+++|+||+|.|+.+. ....|+ +..++.|+..+++.
T Consensus 32 I~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~-~~~~Yt-~~~l~~di~~lld~ 109 (322)
T KOG4178|consen 32 IRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPP-HISEYT-IDELVGDIVALLDH 109 (322)
T ss_pred EEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCC-Ccceee-HHHHHHHHHHHHHH
Confidence 4677888886 5689999999999999999999999 77999999999999998753 236776 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC------------CCCCccHHHH-HHHHHH--HHh
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED------------YHGGFEEAEI-DKVFRA--MEA 147 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~------------~~~~~~~~~~-~~~~~~--~~~ 147 (264)
++.++++++||+||+.+|+.+|..+|++|+++|+++.+........ +...+..... +..+.. ...
T Consensus 110 Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~ 189 (322)
T KOG4178|consen 110 LGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEM 189 (322)
T ss_pred hccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHH
Confidence 9999999999999999999999999999999999998654111000 0000000000 000000 000
Q ss_pred hhhhhhh-hcc-cccCC---CC-----ChHHHHHHHHhhcccCchhhhhhhhhhcCC--ccccccCCcccCEEEEecCCC
Q 024681 148 NYEAWAY-GYA-PLAVG---AD-----VPAAVREFSRTLFNMRPDISLFVSKTVFDT--DLRGILGLVRVPCVIIQTSKD 215 (264)
Q Consensus 148 ~~~~~~~-~~~-~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~P~l~i~g~~D 215 (264)
....+.. ... ..... .. ..+..+.+...+..-.-.......+.+.+. .....+.++++|+++|+|+.|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D 269 (322)
T KOG4178|consen 190 LVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLD 269 (322)
T ss_pred hHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCc
Confidence 0000000 000 00000 00 111222222222211111111222222111 224456788999999999999
Q ss_pred CCcchh-hHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 216 VSVPVS-VAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 216 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+.+.. ..+.+.+.+++..+.++++++||+++.|+|+++.+.+.+|+++
T Consensus 270 ~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 270 PVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINS 319 (322)
T ss_pred ccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHh
Confidence 998865 5566667777745788999999999999999999999999864
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=222.29 Aligned_cols=232 Identities=20% Similarity=0.214 Sum_probs=155.2
Q ss_pred eEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecCh
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHSV 95 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~ 95 (264)
.|||+||++.+...|..+++.| .+|+|+++|+||||.|+... ...| +++++++|+.++++.++. ++++++||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~--~~~~-~~~~~a~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDS--NTVS-SSDQYNRPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCc--cccC-CHHHHHHHHHHHHHhcCCCCCEEEEecCc
Confidence 6999999999999999999999 78999999999999996431 1234 499999999999999987 4999999999
Q ss_pred hHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh-HHHHHHH-
Q 024681 96 SAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP-AAVREFS- 173 (264)
Q Consensus 96 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 173 (264)
||.+++.+|.++|++|+++|++++....... ............ ....+...+.......... .......
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAMVKPGS------IISPRLKNVMEG---TEKIWDYTFGEGPDKPPTGIMMKPEFVR 152 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEccccCCCCC------CccHHHHhhhhc---cccceeeeeccCCCCCcchhhcCHHHHH
Confidence 9999999999999999999999985321100 000000000000 0000000000000000000 0000000
Q ss_pred HhhcccCc-hhhhhhhhhh---------cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCC
Q 024681 174 RTLFNMRP-DISLFVSKTV---------FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG 243 (264)
Q Consensus 174 ~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 243 (264)
.......+ .......... ...+....+..+++|+++++|++|..+|+...+.+.+.+++ +++++++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~-a~~~~i~~~G 231 (255)
T PLN02965 153 HYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP-AQTYVLEDSD 231 (255)
T ss_pred HHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc-ceEEEecCCC
Confidence 00000000 0000000000 00112224456899999999999999999999999999999 8999999999
Q ss_pred CcccccChhcHHHHHHHHhc
Q 024681 244 HLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 244 H~~~~~~~~~~~~~i~~fl~ 263 (264)
|+++.|+|++|++.|.+|++
T Consensus 232 H~~~~e~p~~v~~~l~~~~~ 251 (255)
T PLN02965 232 HSAFFSVPTTLFQYLLQAVS 251 (255)
T ss_pred CchhhcCHHHHHHHHHHHHH
Confidence 99999999999999999986
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=221.13 Aligned_cols=234 Identities=18% Similarity=0.192 Sum_probs=160.2
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHS 94 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 94 (264)
++|+|||+||++++...|..++..| ++|+|+++|+||||.|... ..+ +++++++|+.++++.++.++++++|||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~----~~~-~~~~~~~d~~~~l~~l~~~~~~lvGhS 89 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRD----PVM-NYPAMAQDLLDTLDALQIEKATFIGHS 89 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCC----CCC-CHHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 4579999999999999999999999 9999999999999999753 335 499999999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhh---hhhhhcccccCCCCChHHHH
Q 024681 95 VSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYE---AWAYGYAPLAVGADVPAAVR 170 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~ 170 (264)
|||.+++.+|.++|++|+++|++++.+...... ........ ...... ... .....+... . .......
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 160 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR-----RHDEIFAA-INAVSEAGATTRQQAAAIMRQH-L--NEEGVIQ 160 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccch-----hhHHHHHH-HHHhhhcccccHHHHHHHHHHh-c--CCHHHHH
Confidence 999999999999999999999998654321100 00000000 000000 000 000000000 0 0000111
Q ss_pred HHHHhhcccCch-hhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccccc
Q 024681 171 EFSRTLFNMRPD-ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS 249 (264)
Q Consensus 171 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 249 (264)
.....+...... .................++++++|+|+|+|++|..++.+..+.+.+.+++ +++.+++++||+++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~ 239 (255)
T PRK10673 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ-ARAHVIAGAGHWVHAE 239 (255)
T ss_pred HHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC-cEEEEeCCCCCeeecc
Confidence 111111000000 00000000111111234667899999999999999999999999999999 8999999999999999
Q ss_pred ChhcHHHHHHHHhcC
Q 024681 250 APAIVGPVIRRALSR 264 (264)
Q Consensus 250 ~~~~~~~~i~~fl~~ 264 (264)
+|+++.+.|.+||++
T Consensus 240 ~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 240 KPDAVLRAIRRYLND 254 (255)
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999999974
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-36 Score=223.34 Aligned_cols=252 Identities=20% Similarity=0.215 Sum_probs=167.5
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
.++|.+.|+ +.|+|||+||++++...|..+.+.| ++|+|+++|+||||.|+.+. ...+ +++++++|+.++++.++
T Consensus 17 ~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~-~~~~~~~~l~~~i~~~~ 93 (278)
T TIGR03056 17 HWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPF--RFRF-TLPSMAEDLSALCAAEG 93 (278)
T ss_pred EEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCcc--ccCC-CHHHHHHHHHHHHHHcC
Confidence 577888886 3589999999999999999999999 89999999999999997542 1245 49999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC-CCCCccHHHH------HHHHHHHHhhhhhhhhhcc
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED-YHGGFEEAEI------DKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 157 (264)
.++++++||||||.+++.+|.++|++++++|++++......... .......... .............+.....
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIR 173 (278)
T ss_pred CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhh
Confidence 89999999999999999999999999999999988543211000 0000000000 0000000000000000000
Q ss_pred cccCCCCChHHHHHHHHhhcccC-chhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE
Q 024681 158 PLAVGADVPAAVREFSRTLFNMR-PDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 236 (264)
. ............+........ ...................++++++|+++|+|++|.++|.+..+.+.+.+++ +++
T Consensus 174 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~-~~~ 251 (278)
T TIGR03056 174 D-TGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPT-ATL 251 (278)
T ss_pred c-cccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccC-CeE
Confidence 0 000000001111111000000 0000011111111122345678899999999999999999999999999998 899
Q ss_pred EEecCCCCcccccChhcHHHHHHHHhc
Q 024681 237 ELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+.++++||+++.|.|+++++.|.+|++
T Consensus 252 ~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 252 HVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred EEECCCCCcccccCHHHHHHHHHHHhC
Confidence 999999999999999999999999985
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=227.45 Aligned_cols=250 Identities=17% Similarity=0.244 Sum_probs=162.8
Q ss_pred eeeEEEEeCCC--------CceEEEecCCCCChhhHH--Hhh--------hhc-CCceEEEecCCCCCCCCCCCCC----
Q 024681 6 EALHVRVVGTG--------DRILVLAHGFGTDQSAWQ--RIL--------PYL-NHHRVIMFDLVCAGSVNPDYFD---- 62 (264)
Q Consensus 6 ~~~~~~~~g~~--------~p~vv~~hG~~~~~~~~~--~~~--------~~l-~g~~v~~~d~~g~G~s~~~~~~---- 62 (264)
.+++|...|++ +|+|||+||++++...|. .+. ..+ ++|+|+++|+||||.|+.+...
T Consensus 50 ~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~ 129 (360)
T PRK06489 50 LRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAA 129 (360)
T ss_pred ceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCC
Confidence 46889988874 589999999999987775 332 234 7899999999999999753211
Q ss_pred CcccchHHHHHHHHHHH-HHHhCCCeEE-EEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHH
Q 024681 63 FRRYTTLDAYVDDLLNI-LDTLGVNRCA-YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDK 140 (264)
Q Consensus 63 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
...|+ ++++++++.++ ++++++++++ ++||||||.+|+.+|.++|++|+++|++++.+........ ... ..
T Consensus 130 ~~~~~-~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~---~~~---~~ 202 (360)
T PRK06489 130 FPRYD-YDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNW---MWR---RM 202 (360)
T ss_pred CCccc-HHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHH---HHH---HH
Confidence 11355 89999998885 4889999985 8999999999999999999999999999875421110000 000 00
Q ss_pred HHHHHHhh--------------hhhhhhh-----------cccccCCCC-ChHHHHHHHHhhcccCchhhhhhhhhhcCC
Q 024681 141 VFRAMEAN--------------YEAWAYG-----------YAPLAVGAD-VPAAVREFSRTLFNMRPDISLFVSKTVFDT 194 (264)
Q Consensus 141 ~~~~~~~~--------------~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (264)
........ ....... +........ .....+........................
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (360)
T PRK06489 203 LIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDY 282 (360)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhcc
Confidence 00000000 0000000 000000000 000111111111111122221222222334
Q ss_pred ccccccCCcccCEEEEecCCCCCcchhhH--HHHHHHcCCCceEEEecCC----CCcccccChhcHHHHHHHHhcC
Q 024681 195 DLRGILGLVRVPCVIIQTSKDVSVPVSVA--EYLQRHLGGRNTVELLKIE----GHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 195 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+..+.+.+|++|+|+|+|++|.++|++.. +.+.+.+++ .++++++++ ||.++ ++|+++++.|.+||++
T Consensus 283 d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 283 NPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred ChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHh
Confidence 55677889999999999999999998875 789999999 899999986 99997 8999999999999963
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=222.51 Aligned_cols=250 Identities=18% Similarity=0.196 Sum_probs=166.6
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCC-CcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFD-FRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|.+.|+ ++|+|||+||++.+...|+.+++.| ++|+|+++|+||||.|+.+... ...|+ ++++++++.+++++
T Consensus 115 ~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys-~~~~a~~l~~~i~~ 193 (383)
T PLN03084 115 FRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYT-LDEYVSSLESLIDE 193 (383)
T ss_pred eEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCC-HHHHHHHHHHHHHH
Confidence 3678888886 4689999999999999999999999 9999999999999999764221 12465 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-----h-hhhhhhhc
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-----N-YEAWAYGY 156 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~ 156 (264)
++.++++|+|||+||.+++.+|.++|++|+++|+++++...... . .. ..+..+...... . .......+
T Consensus 194 l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~-~----~p-~~l~~~~~~l~~~~~~~~~~~~~~~~~ 267 (383)
T PLN03084 194 LKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHA-K----LP-STLSEFSNFLLGEIFSQDPLRASDKAL 267 (383)
T ss_pred hCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccc-c----ch-HHHHHHHHHHhhhhhhcchHHHHhhhh
Confidence 99999999999999999999999999999999999986322110 0 00 011111000000 0 00000000
Q ss_pred ccccCCCCChHHHHHHHHhhcccCc--hhhhhhhhhhcC------Cccccc--cCCcccCEEEEecCCCCCcchhhHHHH
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRP--DISLFVSKTVFD------TDLRGI--LGLVRVPCVIIQTSKDVSVPVSVAEYL 226 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~--~~~i~~P~l~i~g~~D~~~~~~~~~~~ 226 (264)
..........+....+...+..... .........+.. .+.... ..++++|+++++|++|.+++.+..+.+
T Consensus 268 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~ 347 (383)
T PLN03084 268 TSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDF 347 (383)
T ss_pred cccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHH
Confidence 0000000011111111111111100 001111111100 001111 135799999999999999999988888
Q ss_pred HHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 227 QRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 227 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++.. + .++++++++||+++.|+|+++++.|.+||++
T Consensus 348 a~~~-~-a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 348 CKSS-Q-HKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHhc-C-CeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 8874 5 7999999999999999999999999999974
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=217.65 Aligned_cols=234 Identities=16% Similarity=0.134 Sum_probs=150.8
Q ss_pred CceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
+|+|||+||++++...|..+++.|++|+|+++|+||||.|+.+. .. +++++++|+.++++.++.++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~~~~vi~~D~~G~G~S~~~~----~~-~~~~~~~~l~~~l~~~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALPDYPRLYIDLPGHGGSAAIS----VD-GFADVSRLLSQTLQSYNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcCCCCEEEecCCCCCCCCCcc----cc-CHHHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 57899999999999999999998866999999999999997642 22 59999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCc-cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhhhhhhhc-ccccCCCCChHHHHHHH
Q 024681 97 AMIGLLASIRRPDL-FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYEAWAYGY-APLAVGADVPAAVREFS 173 (264)
Q Consensus 97 g~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 173 (264)
|.+|+.+|.++|+. |++++++++.+.......... ...........+.. ........+ ...............+.
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQA--RWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLV 154 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHH--HHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHH
Confidence 99999999999764 999999987543221100000 00000000000000 000111000 00001111111111111
Q ss_pred HhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccC
Q 024681 174 RTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSA 250 (264)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 250 (264)
.................. ...+..+.+.++++|+++++|++|..+. .+.+. .+ +++++++++||+++.|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~-~~~~~i~~~gH~~~~e~ 227 (242)
T PRK11126 155 AKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LA-LPLHVIPNAGHNAHREN 227 (242)
T ss_pred HhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hc-CeEEEeCCCCCchhhhC
Confidence 111111111111111111 1234456778899999999999998652 23333 25 79999999999999999
Q ss_pred hhcHHHHHHHHhcC
Q 024681 251 PAIVGPVIRRALSR 264 (264)
Q Consensus 251 ~~~~~~~i~~fl~~ 264 (264)
|+++++.|.+|++.
T Consensus 228 p~~~~~~i~~fl~~ 241 (242)
T PRK11126 228 PAAFAASLAQILRL 241 (242)
T ss_pred hHHHHHHHHHHHhh
Confidence 99999999999863
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=227.50 Aligned_cols=252 Identities=16% Similarity=0.228 Sum_probs=161.2
Q ss_pred eeeEEEEeCCC----CceEEEecCCCCChhhHHH-hhhhc-----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 6 EALHVRVVGTG----DRILVLAHGFGTDQSAWQR-ILPYL-----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 6 ~~~~~~~~g~~----~p~vv~~hG~~~~~~~~~~-~~~~l-----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
..++|...|+. +|+|||+||++++...|.. +++.| ++|+|+++|+||||.|+.+. ...|+ +++++++
T Consensus 186 ~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~--~~~yt-l~~~a~~ 262 (481)
T PLN03087 186 ESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA--DSLYT-LREHLEM 262 (481)
T ss_pred eEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC--CCcCC-HHHHHHH
Confidence 36888888862 4799999999999999975 33433 59999999999999997542 23454 9999999
Q ss_pred HH-HHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHH-H------HHHh
Q 024681 76 LL-NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVF-R------AMEA 147 (264)
Q Consensus 76 ~~-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~ 147 (264)
+. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++.......... ......... . ....
T Consensus 263 l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 339 (481)
T PLN03087 263 IERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQA---TQYVMRKVAPRRVWPPIAFGA 339 (481)
T ss_pred HHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhH---HHHHHHHhcccccCCccccch
Confidence 94 89999999999999999999999999999999999999999753321111000 000000000 0 0000
Q ss_pred hhhhhhhhcccccC--CCCChHHHHH-------------HHHhhcccCchhh-hh---hhhhh---cCCccccccCCccc
Q 024681 148 NYEAWAYGYAPLAV--GADVPAAVRE-------------FSRTLFNMRPDIS-LF---VSKTV---FDTDLRGILGLVRV 205 (264)
Q Consensus 148 ~~~~~~~~~~~~~~--~~~~~~~~~~-------------~~~~~~~~~~~~~-~~---~~~~~---~~~~~~~~~~~i~~ 205 (264)
....|......... .......... ............. .. ..... ..........++++
T Consensus 340 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~v 419 (481)
T PLN03087 340 SVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKC 419 (481)
T ss_pred hHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCC
Confidence 00001000000000 0000000000 0000000000000 00 00000 00111222346899
Q ss_pred CEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc-cChhcHHHHHHHHhcC
Q 024681 206 PCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL-SAPAIVGPVIRRALSR 264 (264)
Q Consensus 206 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 264 (264)
|+|+|+|++|.++|++..+.+++.+|+ +++++++++||+++. ++|+++++.|.+|+++
T Consensus 420 PtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 420 DVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred CEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 999999999999999999999999999 899999999999885 9999999999999863
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=225.36 Aligned_cols=246 Identities=15% Similarity=0.141 Sum_probs=159.1
Q ss_pred eeEEEEeCC----CCceEEEecCCCCChh-hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHH
Q 024681 7 ALHVRVVGT----GDRILVLAHGFGTDQS-AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 7 ~~~~~~~g~----~~p~vv~~hG~~~~~~-~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~ 79 (264)
+++|..+++ .+++|||+||++++.. .|..+++.| .||+|+++|+||||.|+... ....+++++++|+.++
T Consensus 73 ~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~---~~~~~~~~~~~dv~~~ 149 (349)
T PLN02385 73 EIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH---GYIPSFDDLVDDVIEH 149 (349)
T ss_pred EEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC---CCcCCHHHHHHHHHHH
Confidence 455656553 3578999999998865 468898888 69999999999999997531 1112589999999999
Q ss_pred HHHhCC------CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh
Q 024681 80 LDTLGV------NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA 153 (264)
Q Consensus 80 ~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
++.+.. .+++|+||||||.+++.++.++|++++++|+++|........ . ...........+......+.
T Consensus 150 l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~--~---~~~~~~~~~~~~~~~~p~~~ 224 (349)
T PLN02385 150 YSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDV--V---PPPLVLQILILLANLLPKAK 224 (349)
T ss_pred HHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccc--c---CchHHHHHHHHHHHHCCCce
Confidence 988753 279999999999999999999999999999999864432111 0 01111111111111100000
Q ss_pred ----hhcccccCCCCChHHHHHHHHhh-cc-cCchhhhhhhhhhc-CCccccccCCcccCEEEEecCCCCCcchhhHHHH
Q 024681 154 ----YGYAPLAVGADVPAAVREFSRTL-FN-MRPDISLFVSKTVF-DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYL 226 (264)
Q Consensus 154 ----~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 226 (264)
..+....+... ......... .. ............+. ..+....+.++++|+|+|+|++|.++|++.++.+
T Consensus 225 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l 301 (349)
T PLN02385 225 LVPQKDLAELAFRDL---KKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFL 301 (349)
T ss_pred ecCCCccccccccCH---HHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHH
Confidence 00000000000 000010000 00 00011111111111 1233456778999999999999999999999999
Q ss_pred HHHcCC-CceEEEecCCCCcccccChhc----HHHHHHHHhc
Q 024681 227 QRHLGG-RNTVELLKIEGHLPHLSAPAI----VGPVIRRALS 263 (264)
Q Consensus 227 ~~~~~~-~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~ 263 (264)
++.++. .+++++++++||+++.++|++ +.+.|.+||+
T Consensus 302 ~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~ 343 (349)
T PLN02385 302 YEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLD 343 (349)
T ss_pred HHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHH
Confidence 998843 279999999999999999976 7888899986
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=219.09 Aligned_cols=258 Identities=17% Similarity=0.194 Sum_probs=160.2
Q ss_pred eeeEEEEeCC----CCceEEEecCCCCChhhHHHhh---hhc--CCceEEEecCCCCCCCCCCCCCCcccc----hHHHH
Q 024681 6 EALHVRVVGT----GDRILVLAHGFGTDQSAWQRIL---PYL--NHHRVIMFDLVCAGSVNPDYFDFRRYT----TLDAY 72 (264)
Q Consensus 6 ~~~~~~~~g~----~~p~vv~~hG~~~~~~~~~~~~---~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~----~~~~~ 72 (264)
.+++|...|+ ++|+||++||++++...|..++ +.| .+|+|+++|+||||.|+.+......|+ ....+
T Consensus 26 ~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 105 (339)
T PRK07581 26 ARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTI 105 (339)
T ss_pred ceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeH
Confidence 3688998886 2356777777777776676554 466 689999999999999975421111221 01224
Q ss_pred HHHHHH----HHHHhCCCe-EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC---------------CCCCCC
Q 024681 73 VDDLLN----ILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND---------------EDYHGG 132 (264)
Q Consensus 73 ~~~~~~----~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~---------------~~~~~~ 132 (264)
++|+.+ +++++++++ ++|+||||||.+|+.+|.++|++|+++|++++.+..... ..+...
T Consensus 106 ~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 185 (339)
T PRK07581 106 YDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGG 185 (339)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCC
Confidence 555544 778899999 479999999999999999999999999999876532110 000000
Q ss_pred c----cHHHHHHHHHHHHh--hhhhhhhhcccccCCCCC-hHHHHHHHHh-hcccCchhhhhhhhhhc----------CC
Q 024681 133 F----EEAEIDKVFRAMEA--NYEAWAYGYAPLAVGADV-PAAVREFSRT-LFNMRPDISLFVSKTVF----------DT 194 (264)
Q Consensus 133 ~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~~ 194 (264)
. .............. ....+............. .......... ....++........... ..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 265 (339)
T PRK07581 186 WYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGG 265 (339)
T ss_pred CCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCC
Confidence 0 00111111010000 000111100000000000 1111122111 12222222222211111 12
Q ss_pred ccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecC-CCCcccccChhcHHHHHHHHhcC
Q 024681 195 DLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI-EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 195 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+....+.++++|+|+|+|++|..+|++..+.+.+.+++ ++++++++ +||+++.++++++...|.+||++
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDAALKE 335 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHHHHHH
Confidence 45567888999999999999999999999999999999 89999998 89999999999999999999864
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=205.82 Aligned_cols=254 Identities=16% Similarity=0.144 Sum_probs=165.7
Q ss_pred EEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCe
Q 024681 9 HVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNR 87 (264)
Q Consensus 9 ~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (264)
.......+++++|++||+|++...|-.-++.| +..+|+++|++|+|+|+.+.++.+.-.....+++-+++.....++++
T Consensus 82 ~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~K 161 (365)
T KOG4409|consen 82 TVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEK 161 (365)
T ss_pred eecccccCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcc
Confidence 33333346679999999999999999999999 99999999999999998877666555556788999999999999999
Q ss_pred EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC-CCCCCCccHHHHHHHHHHHH-------------hhhhhhh
Q 024681 88 CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND-EDYHGGFEEAEIDKVFRAME-------------ANYEAWA 153 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 153 (264)
.+|+|||+||++|..+|.++|++|+.+||++|....... ...........+........ ..-....
T Consensus 162 milvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv 241 (365)
T KOG4409|consen 162 MILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLV 241 (365)
T ss_pred eeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHH
Confidence 999999999999999999999999999999996543322 11111111111111111111 0001111
Q ss_pred hhcccccCCCC----ChHHHHHHHHhhcccCchhhhhhhhhhcC-----CccccccCCc--ccCEEEEecCCCCCcchhh
Q 024681 154 YGYAPLAVGAD----VPAAVREFSRTLFNMRPDISLFVSKTVFD-----TDLRGILGLV--RVPCVIIQTSKDVSVPVSV 222 (264)
Q Consensus 154 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~ 222 (264)
..+.+..+..- .++.+-++.-.....++.....+...+.. ..+.+.+..+ ++|+++|+|++|-+- ...
T Consensus 242 ~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD-~~~ 320 (365)
T KOG4409|consen 242 SRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMD-KNA 320 (365)
T ss_pred hhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCccccc-chh
Confidence 11111111111 11122333333333333333332222211 1222333444 499999999998654 444
Q ss_pred HHHHHHHcCC-CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 223 AEYLQRHLGG-RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 223 ~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
..++.+.+.. .++.+++|++||.+..++|+.|++.+.++++
T Consensus 321 g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~ 362 (365)
T KOG4409|consen 321 GLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECD 362 (365)
T ss_pred HHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHh
Confidence 4444443332 2899999999999999999999999999886
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=222.05 Aligned_cols=244 Identities=20% Similarity=0.284 Sum_probs=158.3
Q ss_pred eeEEEEeCCCCceEEEecCCCCChh------------hHHHhhh---hc--CCceEEEecCCCCCCCCCCCCCCcccchH
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQS------------AWQRILP---YL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTL 69 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~------------~~~~~~~---~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~ 69 (264)
+++|+..|++++++||+||++++.. .|..+.. .| ++|+|+++|+||||.|.. ..++ +
T Consensus 47 ~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~-----~~~~-~ 120 (343)
T PRK08775 47 RLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD-----VPID-T 120 (343)
T ss_pred eEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC-----CCCC-H
Confidence 5889999964445777766665554 6888886 56 699999999999998843 2344 7
Q ss_pred HHHHHHHHHHHHHhCCCeE-EEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHH------
Q 024681 70 DAYVDDLLNILDTLGVNRC-AYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVF------ 142 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~------ 142 (264)
+++++|+.+++++++++++ +++||||||.+|+.+|.++|++|+++|++++.+...... . .........
T Consensus 121 ~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~---~--~~~~~~~~~~~~~~~ 195 (343)
T PRK08775 121 ADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYA---A--AWRALQRRAVALGQL 195 (343)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHH---H--HHHHHHHHHHHcCCC
Confidence 8899999999999999764 799999999999999999999999999999864321000 0 000000000
Q ss_pred -----------HHH----HhhhhhhhhhcccccC--CCCChHHHHHHH-----HhhcccCchhhhhhhhhhcCCcccccc
Q 024681 143 -----------RAM----EANYEAWAYGYAPLAV--GADVPAAVREFS-----RTLFNMRPDISLFVSKTVFDTDLRGIL 200 (264)
Q Consensus 143 -----------~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (264)
... ......+...+..... ..........+. .......+............ ....+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l 273 (343)
T PRK08775 196 QCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL--HRVDP 273 (343)
T ss_pred CCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh--cCCCh
Confidence 000 0000001011110000 000000011111 11111122212222111110 12236
Q ss_pred CCcccCEEEEecCCCCCcchhhHHHHHHHc-CCCceEEEecC-CCCcccccChhcHHHHHHHHhcC
Q 024681 201 GLVRVPCVIIQTSKDVSVPVSVAEYLQRHL-GGRNTVELLKI-EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 201 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.++++|+|+++|++|.++|++..+++.+.+ ++ ++++++++ +||++++|+|++|++.|.+||++
T Consensus 274 ~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~-a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 274 EAIRVPTVVVAVEGDRLVPLADLVELAEGLGPR-GSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred hcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCC-CeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 789999999999999999999999999988 56 89999985 99999999999999999999963
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=217.12 Aligned_cols=251 Identities=14% Similarity=0.091 Sum_probs=162.8
Q ss_pred eeEEEEeCC--CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCC--CcccchHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT--GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFD--FRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 7 ~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~--~~~~~~~~~~~~~~~~~~ 80 (264)
.++|..+++ ++++||++||++++...|..++..| .||+|+++|+||||.|+....+ .....+++++++|+.+++
T Consensus 42 ~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~ 121 (330)
T PRK10749 42 PIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFW 121 (330)
T ss_pred EEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHH
Confidence 588888764 4579999999999999999999877 8999999999999999753211 111225899999999999
Q ss_pred HHh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh---
Q 024681 81 DTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA--- 153 (264)
Q Consensus 81 ~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 153 (264)
+.+ +..+++++||||||.+++.+|.++|++++++|+++|........ . ......+...... .....
T Consensus 122 ~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~--~----~~~~~~~~~~~~~-~~~~~~~~ 194 (330)
T PRK10749 122 QQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL--P----SWMARRILNWAEG-HPRIRDGY 194 (330)
T ss_pred HHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC--C----cHHHHHHHHHHHH-hcCCCCcC
Confidence 886 56799999999999999999999999999999998854321111 0 0011111111100 00000
Q ss_pred ----hhcccccC-C---CCChHHHHHHHHhhcccCch----hhhhhhhhhc--CCccccccCCcccCEEEEecCCCCCcc
Q 024681 154 ----YGYAPLAV-G---ADVPAAVREFSRTLFNMRPD----ISLFVSKTVF--DTDLRGILGLVRVPCVIIQTSKDVSVP 219 (264)
Q Consensus 154 ----~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~ 219 (264)
........ . ...........+.....+.. ....+..... .......+.++++|+|+|+|++|.+++
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~ 274 (330)
T PRK10749 195 AIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVD 274 (330)
T ss_pred CCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeC
Confidence 00000000 0 01111112222222211100 0111111110 112234567889999999999999999
Q ss_pred hhhHHHHHHHcCC------CceEEEecCCCCcccccCh---hcHHHHHHHHhcC
Q 024681 220 VSVAEYLQRHLGG------RNTVELLKIEGHLPHLSAP---AIVGPVIRRALSR 264 (264)
Q Consensus 220 ~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 264 (264)
++.++.+++.+++ .+++++++++||.++.|.+ +++.+.|.+||++
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 275 NRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred HHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 9999988887632 1589999999999998876 6788889999864
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=218.70 Aligned_cols=256 Identities=18% Similarity=0.287 Sum_probs=165.4
Q ss_pred eeeEEEEeCC----CCceEEEecCCCCChh-----------hHHHhh----hhc-CCceEEEecCCC--CCCCCCCCCC-
Q 024681 6 EALHVRVVGT----GDRILVLAHGFGTDQS-----------AWQRIL----PYL-NHHRVIMFDLVC--AGSVNPDYFD- 62 (264)
Q Consensus 6 ~~~~~~~~g~----~~p~vv~~hG~~~~~~-----------~~~~~~----~~l-~g~~v~~~d~~g--~G~s~~~~~~- 62 (264)
.+++|..+|+ ++|+||++||++++.. .|..++ ..+ ++|+|+++|+|| +|.|.+....
T Consensus 16 ~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~ 95 (351)
T TIGR01392 16 VRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINP 95 (351)
T ss_pred ceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCC
Confidence 3688999984 3579999999999763 478776 334 899999999999 5665432111
Q ss_pred --------CcccchHHHHHHHHHHHHHHhCCCe-EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC-CC---
Q 024681 63 --------FRRYTTLDAYVDDLLNILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE-DY--- 129 (264)
Q Consensus 63 --------~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-~~--- 129 (264)
...|+ ++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++.+...... .+
T Consensus 96 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
T TIGR01392 96 GGRPYGSDFPLIT-IRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNEV 174 (351)
T ss_pred CCCcCCCCCCCCc-HHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHHH
Confidence 11354 9999999999999999998 9999999999999999999999999999999865432110 00
Q ss_pred -----------CCC-c-----cHHHHH--HHHHHH-HhhhhhhhhhcccccCCCC-C------hHHHHHHH-----Hhhc
Q 024681 130 -----------HGG-F-----EEAEID--KVFRAM-EANYEAWAYGYAPLAVGAD-V------PAAVREFS-----RTLF 177 (264)
Q Consensus 130 -----------~~~-~-----~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~-----~~~~ 177 (264)
... . ...... ...... ......+...+........ . ....+.+. ....
T Consensus 175 ~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
T TIGR01392 175 QRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVD 254 (351)
T ss_pred HHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHh
Confidence 000 0 000000 000000 0000111111111111000 0 00011111 1122
Q ss_pred ccCchhhhhhhhhhcC-------CccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEE-----EecCCCCc
Q 024681 178 NMRPDISLFVSKTVFD-------TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE-----LLKIEGHL 245 (264)
Q Consensus 178 ~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~~gH~ 245 (264)
..++.........+.. .+..+.+++|++|+|+|+|++|.++|++..+.+++.+++ .++. +++++||+
T Consensus 255 ~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~-~~~~v~~~~i~~~~GH~ 333 (351)
T TIGR01392 255 RFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA-AGLRVTYVEIESPYGHD 333 (351)
T ss_pred hcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh-cCCceEEEEeCCCCCcc
Confidence 2222222222222211 234577889999999999999999999999999999998 5554 55789999
Q ss_pred ccccChhcHHHHHHHHhc
Q 024681 246 PHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 246 ~~~~~~~~~~~~i~~fl~ 263 (264)
+++++|+++++.|.+||+
T Consensus 334 ~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 334 AFLVETDQVEELIRGFLR 351 (351)
T ss_pred hhhcCHHHHHHHHHHHhC
Confidence 999999999999999985
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=218.83 Aligned_cols=256 Identities=18% Similarity=0.299 Sum_probs=166.0
Q ss_pred eeEEEEeCC----CCceEEEecCCCCChhh-------------HHHhh----hhc-CCceEEEecCCCC-CCCC-CCCCC
Q 024681 7 ALHVRVVGT----GDRILVLAHGFGTDQSA-------------WQRIL----PYL-NHHRVIMFDLVCA-GSVN-PDYFD 62 (264)
Q Consensus 7 ~~~~~~~g~----~~p~vv~~hG~~~~~~~-------------~~~~~----~~l-~g~~v~~~d~~g~-G~s~-~~~~~ 62 (264)
+++|...|+ ++|+|||+||++++... |..++ ..+ ++|+|+++|++|+ |.|+ +....
T Consensus 34 ~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~ 113 (379)
T PRK00175 34 ELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSIN 113 (379)
T ss_pred eEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCC
Confidence 588999885 25899999999999874 67776 344 8999999999983 4443 22111
Q ss_pred C----------cccchHHHHHHHHHHHHHHhCCCe-EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC-C-
Q 024681 63 F----------RRYTTLDAYVDDLLNILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED-Y- 129 (264)
Q Consensus 63 ~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-~- 129 (264)
+ ..|+ ++++++++.++++++++++ ++++||||||.+++.+|.++|++|+++|++++.+....... +
T Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 192 (379)
T PRK00175 114 PDTGKPYGSDFPVIT-IRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFN 192 (379)
T ss_pred CCCCCcccCCCCcCC-HHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHH
Confidence 1 1465 9999999999999999999 59999999999999999999999999999998654221100 0
Q ss_pred -------------CCC-c----cHH--H--HHHHHHH-HHhhhhhhhhhcccccCCCCC------hHHHHHHH-----Hh
Q 024681 130 -------------HGG-F----EEA--E--IDKVFRA-MEANYEAWAYGYAPLAVGADV------PAAVREFS-----RT 175 (264)
Q Consensus 130 -------------~~~-~----~~~--~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~~ 175 (264)
... + ... . ....... ...........+......... ......+. ..
T Consensus 193 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 272 (379)
T PRK00175 193 EVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKF 272 (379)
T ss_pred HHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHH
Confidence 000 0 000 0 0000000 000000111111111111000 00111111 11
Q ss_pred hcccCchhhhhhhhhhcC--------CccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCc----eEEEec-CC
Q 024681 176 LFNMRPDISLFVSKTVFD--------TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN----TVELLK-IE 242 (264)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----~~~~~~-~~ 242 (264)
....++.........+.. .+..+.+.+|++|+|+|+|++|.++|++..+.+++.+++ . ++++++ ++
T Consensus 273 ~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~-a~~~~~l~~i~~~~ 351 (379)
T PRK00175 273 VERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLA-AGADVSYAEIDSPY 351 (379)
T ss_pred hhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHh-cCCCeEEEEeCCCC
Confidence 222233222222222111 235677889999999999999999999999999999987 4 677775 89
Q ss_pred CCcccccChhcHHHHHHHHhcC
Q 024681 243 GHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 243 gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
||++++|+|+++++.|.+||++
T Consensus 352 GH~~~le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 352 GHDAFLLDDPRYGRLVRAFLER 373 (379)
T ss_pred CchhHhcCHHHHHHHHHHHHHh
Confidence 9999999999999999999964
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=209.96 Aligned_cols=246 Identities=18% Similarity=0.217 Sum_probs=154.4
Q ss_pred eeEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
+++|+.+-+ .++.|+++||+++++..|..+++.| .||+|+++|+||||.|+... ....++.++++|+...++
T Consensus 12 ~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~---~~~~~~~~~~~d~~~~l~ 88 (276)
T PHA02857 12 YIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK---MMIDDFGVYVRDVVQHVV 88 (276)
T ss_pred EEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc---CCcCCHHHHHHHHHHHHH
Confidence 344544322 3456777799999999999999999 69999999999999997532 112246677777777776
Q ss_pred Hh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 82 TL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 82 ~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
.+ ...+++++||||||.+|+.+|.++|++++++|+++|..... .. . ....+......... .......+.
T Consensus 89 ~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~---~~--~-~~~~~~~~~~~~~~-~~~~~~~~~ 161 (276)
T PHA02857 89 TIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAE---AV--P-RLNLLAAKLMGIFY-PNKIVGKLC 161 (276)
T ss_pred HHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccc---cc--c-HHHHHHHHHHHHhC-CCCccCCCC
Confidence 54 34689999999999999999999999999999999853310 00 0 00111101000000 000000000
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhhhh--cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCce
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTV--FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT 235 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 235 (264)
........ .....+..............+.... ...+....+.++++|+|+++|++|.++|++.++++.+.+...++
T Consensus 162 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~ 240 (276)
T PHA02857 162 PESVSRDM-DEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNRE 240 (276)
T ss_pred HhhccCCH-HHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCce
Confidence 00011110 0111111000000000000010100 11223456788999999999999999999999999988743379
Q ss_pred EEEecCCCCcccccCh---hcHHHHHHHHhc
Q 024681 236 VELLKIEGHLPHLSAP---AIVGPVIRRALS 263 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~---~~~~~~i~~fl~ 263 (264)
+.+++++||.++.|.+ +++.+.+.+||+
T Consensus 241 ~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~ 271 (276)
T PHA02857 241 IKIYEGAKHHLHKETDEVKKSVMKEIETWIF 271 (276)
T ss_pred EEEeCCCcccccCCchhHHHHHHHHHHHHHH
Confidence 9999999999998876 578899999986
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=209.72 Aligned_cols=225 Identities=26% Similarity=0.433 Sum_probs=154.1
Q ss_pred EEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHH
Q 024681 20 LVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAM 98 (264)
Q Consensus 20 vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 98 (264)
|||+||++++...|..+++.| +||+|+++|+||+|.|..... ...+ ++++.++|+.++++.++.++++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~-~~~~-~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPD-YSPY-SIEDYAEDLAELLDALGIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSS-GSGG-SHHHHHHHHHHHHHHTTTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccc-cCCc-chhhhhhhhhhcccccccccccccccccccc
Confidence 799999999999999999999 999999999999999976421 1234 4999999999999999999999999999999
Q ss_pred HHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhh-cccccCCCCChHHHHHHHHhhc
Q 024681 99 IGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG-YAPLAVGADVPAAVREFSRTLF 177 (264)
Q Consensus 99 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 177 (264)
+++.++.++|++|+++|++++......... .......+.............+... +.... ...........
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-- 150 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPS--RSFGPSFIRRLLAWRSRSLRRLASRFFYRWF----DGDEPEDLIRS-- 150 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----THHHHHHHHHH--
T ss_pred cccccccccccccccceeeccccccccccc--ccccchhhhhhhhcccccccccccccccccc----ccccccccccc--
Confidence 999999999999999999998653211000 0000011111111111111111100 00000 00111111111
Q ss_pred ccCchhhhhhhhh-hcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHH
Q 024681 178 NMRPDISLFVSKT-VFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGP 256 (264)
Q Consensus 178 ~~~~~~~~~~~~~-~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 256 (264)
........... ....+....++++++|+++++|++|.+++.+..+.+.+.+++ +++++++++||+++.++|+++++
T Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 151 --SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPN-AELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT-EEEEEETTSSSTHHHHSHHHHHH
T ss_pred --cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCccHHHCHHHHhc
Confidence 01111111111 122334456677899999999999999999999999999998 89999999999999999999886
Q ss_pred H
Q 024681 257 V 257 (264)
Q Consensus 257 ~ 257 (264)
+
T Consensus 228 a 228 (228)
T PF12697_consen 228 A 228 (228)
T ss_dssp H
T ss_pred C
Confidence 4
|
... |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=209.32 Aligned_cols=245 Identities=22% Similarity=0.287 Sum_probs=156.8
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|.+.+.++|+|||+||++.+...|..+...| +||+|+++|+||||.|... .....+++++++++.++++.++
T Consensus 8 ~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~---~~~~~~~~~~~~~l~~~i~~l~ 84 (273)
T PLN02211 8 EVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSD---ADSVTTFDEYNKPLIDFLSSLP 84 (273)
T ss_pred ccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCC---cccCCCHHHHHHHHHHHHHhcC
Confidence 3444445455689999999999999999999999 6999999999999988542 1222259999999999999985
Q ss_pred -CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccH-HHHHHHHHHHHhhhhhhhhhcccccC-
Q 024681 85 -VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEE-AEIDKVFRAMEANYEAWAYGYAPLAV- 161 (264)
Q Consensus 85 -~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 161 (264)
.++++|+||||||.++..++.++|++|+++|++++..... .+.. ................+.........
T Consensus 85 ~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
T PLN02211 85 ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKL-------GFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQ 157 (273)
T ss_pred CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCC-------CCCHHHHHhccccchhhhccceeeeeccCCCC
Confidence 5899999999999999999999999999999998743210 0000 00000000000000000000000000
Q ss_pred CCCChHHHHHHHH-hhcccCchhhhhhh---------hhhcCCccccccCCc-ccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 162 GADVPAAVREFSR-TLFNMRPDISLFVS---------KTVFDTDLRGILGLV-RVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
..........+.. .+....+....... ..+...+......++ ++|+++|.|++|..+|++.++.+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~ 237 (273)
T PLN02211 158 PPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRW 237 (273)
T ss_pred CCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhC
Confidence 0000000000000 01111111111100 011111222223345 789999999999999999999999999
Q ss_pred CCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 231 GGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 231 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+. .+++.++ +||.+++++|+++.+.|.++..
T Consensus 238 ~~-~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 238 PP-SQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred Cc-cEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 98 7899997 8999999999999999998754
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-34 Score=211.62 Aligned_cols=243 Identities=25% Similarity=0.349 Sum_probs=158.5
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CC--ceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEe
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NH--HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVG 92 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 92 (264)
.+|+||++|||+++...|+..+..| +. +.|+++|++|+|.++..+. ...|+ ..++++.+..++......+++++|
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~-~~~y~-~~~~v~~i~~~~~~~~~~~~~lvg 134 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPR-GPLYT-LRELVELIRRFVKEVFVEPVSLVG 134 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCC-CCcee-hhHHHHHHHHHHHhhcCcceEEEE
Confidence 4689999999999999999999999 54 9999999999996544322 23365 999999999999999989999999
Q ss_pred cChhHHHHHHHHHhCCCccceeEEec---CCCCCCCCCCCCCCccHHHHHHHHHHHHhhh--------hhhhhhcccc-c
Q 024681 93 HSVSAMIGLLASIRRPDLFTKLILIG---ASPRFLNDEDYHGGFEEAEIDKVFRAMEANY--------EAWAYGYAPL-A 160 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p~~v~~~vl~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~ 160 (264)
||+||.+|+.+|+.+|+.|+++++++ +........ .......+........... ..+....... .
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 211 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKG---IKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLK 211 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcc---hhHHHHhhhhhccHhhhcCccccccchhheeHhhhccee
Confidence 99999999999999999999999554 432211110 0000001110000000000 0000000000 0
Q ss_pred CCCCChH-HHHHHHHhhccc-----CchhhhhhhhhhcC--CccccccCCcc-cCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 161 VGADVPA-AVREFSRTLFNM-----RPDISLFVSKTVFD--TDLRGILGLVR-VPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 161 ~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
....... ............ .......+...... ......+.++. +|+++++|++|+++|.+.++.+.+.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p 291 (326)
T KOG1454|consen 212 VVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLP 291 (326)
T ss_pred eeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCC
Confidence 0000000 111111111000 00111111111111 23333456666 999999999999999999999999998
Q ss_pred CCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 232 GRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+ +++++++++||.+++|.|+++++.|..|+.+
T Consensus 292 n-~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 292 N-AELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred C-ceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 8 9999999999999999999999999999863
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-33 Score=203.15 Aligned_cols=241 Identities=22% Similarity=0.360 Sum_probs=159.0
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH-HHHHHHHhCCCeEEEEecC
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD-LLNILDTLGVNRCAYVGHS 94 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~S 94 (264)
+|+||++||++++...|..+.+.| ++|+|+++|+||+|.|+.+. ....+ ++++.+++ +..+++.++.++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPD-EIERY-DFEEAAQDILATLLDQLGIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCC-ccChh-hHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence 378999999999999999999999 99999999999999996531 11233 58899999 7888888888999999999
Q ss_pred hhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCC-ccHHHHHHHHHHHHhhhhhhhhhcccc-cCCC---CChHHH
Q 024681 95 VSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG-FEEAEIDKVFRAMEANYEAWAYGYAPL-AVGA---DVPAAV 169 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~ 169 (264)
+||.+++.+|.++|+.|++++++++.+........... .........+. ......+...+... .+.. ......
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFE--QEGLEAFLDDWYQQPLFASQKNLPPEQR 156 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHH--hcCccHHHHHHhcCceeeecccCChHHh
Confidence 99999999999999999999999986543221110000 00000000000 00011111111000 0000 111111
Q ss_pred HHHHHhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcc
Q 024681 170 REFSRTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLP 246 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 246 (264)
..+........+.......... ...+....+.++++|+++++|++|..++ +..+.+.+..++ ++++.++++||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~ 234 (251)
T TIGR03695 157 QALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN-LTLVIIANAGHNI 234 (251)
T ss_pred HHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCC-CcEEEEcCCCCCc
Confidence 1222221111222111111111 1223345567889999999999998764 566778888888 8999999999999
Q ss_pred cccChhcHHHHHHHHhc
Q 024681 247 HLSAPAIVGPVIRRALS 263 (264)
Q Consensus 247 ~~~~~~~~~~~i~~fl~ 263 (264)
++++|+++.+.|.+||+
T Consensus 235 ~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 235 HLENPEAFAKILLAFLE 251 (251)
T ss_pred CccChHHHHHHHHHHhC
Confidence 99999999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=208.52 Aligned_cols=249 Identities=18% Similarity=0.185 Sum_probs=153.1
Q ss_pred eeEEEEeCC-----CCceEEEecCCCCCh-hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 7 ALHVRVVGT-----GDRILVLAHGFGTDQ-SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 7 ~~~~~~~g~-----~~p~vv~~hG~~~~~-~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
+++|+.+++ .+++|||+||++.+. ..|..+...| +||+|+++|+||||.|+... ....+++.+++|+.+
T Consensus 44 ~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~---~~~~~~~~~~~D~~~ 120 (330)
T PLN02298 44 SLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR---AYVPNVDLVVEDCLS 120 (330)
T ss_pred EEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc---ccCCCHHHHHHHHHH
Confidence 456655432 345799999998664 3567777778 79999999999999996421 111258899999999
Q ss_pred HHHHhCC------CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhh
Q 024681 79 ILDTLGV------NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAW 152 (264)
Q Consensus 79 ~~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (264)
+++.+.. .+++|+||||||.+++.++.++|++|+++|++++........ ..... ...............
T Consensus 121 ~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~ 195 (330)
T PLN02298 121 FFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKI--RPPWP---IPQILTFVARFLPTL 195 (330)
T ss_pred HHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCccc--CCchH---HHHHHHHHHHHCCCC
Confidence 9998743 379999999999999999999999999999999864322110 00000 111111111000000
Q ss_pred hhhcccccCCCCCh-HHHHHHHHh-hcccCch-hhhhhhhhhc-CCccccccCCcccCEEEEecCCCCCcchhhHHHHHH
Q 024681 153 AYGYAPLAVGADVP-AAVREFSRT-LFNMRPD-ISLFVSKTVF-DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR 228 (264)
Q Consensus 153 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 228 (264)
.............. ......... ....... .......... .......+.++++|+|+++|++|.++|++.++.+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~ 275 (330)
T PLN02298 196 AIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYE 275 (330)
T ss_pred ccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHH
Confidence 00000000000000 000111000 0000000 0000000000 011235577889999999999999999999999988
Q ss_pred HcCCC-ceEEEecCCCCcccccChh----cHHHHHHHHhc
Q 024681 229 HLGGR-NTVELLKIEGHLPHLSAPA----IVGPVIRRALS 263 (264)
Q Consensus 229 ~~~~~-~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~ 263 (264)
.++.. ++++++++++|.++.++|+ ++.+.|.+||.
T Consensus 276 ~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~ 315 (330)
T PLN02298 276 EAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLN 315 (330)
T ss_pred HhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHH
Confidence 87522 7999999999999998885 46677778875
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=207.51 Aligned_cols=247 Identities=16% Similarity=0.195 Sum_probs=152.9
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcc-cchHHHHHHHHHHHHHHhCCCeEEEEec
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRR-YTTLDAYVDDLLNILDTLGVNRCAYVGH 93 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 93 (264)
++|+||++||++++...|...+..| ++|+|+++|+||||.|+.+...... ....+.+++++.++++.++.++++++||
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGh 183 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGH 183 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 4589999999999999998888999 8899999999999999754221111 1112245677888888889899999999
Q ss_pred ChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCC---CccHHHHHHHHHHH--------------Hh----hhhhh
Q 024681 94 SVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG---GFEEAEIDKVFRAM--------------EA----NYEAW 152 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------------~~----~~~~~ 152 (264)
||||.+++.+|.++|++|+++|++++............ .........+.... .. ....+
T Consensus 184 S~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~ 263 (402)
T PLN02894 184 SFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRY 263 (402)
T ss_pred CHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHH
Confidence 99999999999999999999999998644322211100 00000000000000 00 00000
Q ss_pred h-hhccccc----CCCCChHHHHHHHHhhcccCchh--hhhhhh---hhcCCccccccCCcccCEEEEecCCCCCcchhh
Q 024681 153 A-YGYAPLA----VGADVPAAVREFSRTLFNMRPDI--SLFVSK---TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV 222 (264)
Q Consensus 153 ~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 222 (264)
. ..+.... ...........+........+.. ...... .....+....+.++++|+++|+|++|.+.+ ..
T Consensus 264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~ 342 (402)
T PLN02894 264 TTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EG 342 (402)
T ss_pred HHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HH
Confidence 0 0000000 11111111111111111111111 011111 112344556678899999999999998765 45
Q ss_pred HHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 223 AEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
...+.+..+..+++++++++||+++.|+|++|++.|.+|++
T Consensus 343 ~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~ 383 (402)
T PLN02894 343 AVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACR 383 (402)
T ss_pred HHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHH
Confidence 55555555433789999999999999999999999998875
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=200.35 Aligned_cols=250 Identities=17% Similarity=0.244 Sum_probs=155.6
Q ss_pred eeEEEEeCC-C-CceEEEecCCCCCh-hhHHHhhhhc-C-CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT-G-DRILVLAHGFGTDQ-SAWQRILPYL-N-HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g~-~-~p~vv~~hG~~~~~-~~~~~~~~~l-~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+.|...+. + +|+|||+||++++. ..|..+...+ + ||+|+++|+||+|.|..+......+ +++++++++.++++
T Consensus 13 ~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~-~~~~~~~~~~~~~~ 91 (288)
T TIGR01250 13 YHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELW-TIDYFVDELEEVRE 91 (288)
T ss_pred eEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccc-cHHHHHHHHHHHHH
Confidence 456666653 3 57999999976555 4556666666 4 8999999999999997542111124 49999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC----CCCCccHHHHHHHHHHHHh-------hhh
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED----YHGGFEEAEIDKVFRAMEA-------NYE 150 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-------~~~ 150 (264)
.++.++++++||||||.+++.+|.++|++++++|++++......... ........ .......... ...
T Consensus 92 ~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (288)
T TIGR01250 92 KLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPE-VRAAIKRCEASGDYDNPEYQ 170 (288)
T ss_pred HcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChh-HHHHHHHHHhccCcchHHHH
Confidence 99999999999999999999999999999999999987532110000 00000000 0000000000 000
Q ss_pred hhhhhcc--cccCCCCChHHHHHHHHhhcccCchhhh--------hhhhhhcCCccccccCCcccCEEEEecCCCCCcch
Q 024681 151 AWAYGYA--PLAVGADVPAAVREFSRTLFNMRPDISL--------FVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV 220 (264)
Q Consensus 151 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 220 (264)
.....+. ................. ........ .........+....+.++++|+++++|++|.+ ++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~ 246 (288)
T TIGR01250 171 EAVEVFYHHLLCRTRKWPEALKHLKS---GMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TP 246 (288)
T ss_pred HHHHHHHHHhhcccccchHHHHHHhh---ccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CH
Confidence 0000000 00000000000000000 00000000 00001112233455678999999999999985 56
Q ss_pred hhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 221 SVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+..+.+.+.+++ .++++++++||+++.++|+++.+.|.+||+
T Consensus 247 ~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 247 EAAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 788889998988 899999999999999999999999999985
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=207.21 Aligned_cols=242 Identities=25% Similarity=0.324 Sum_probs=160.1
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
.++|...|+ .+|+|||+||++++...|..+...| ++|+|+++|+||||.|... ...+ +++++++++.++++.++
T Consensus 120 ~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~---~~~~-~~~~~~~~~~~~~~~~~ 195 (371)
T PRK14875 120 TVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKA---VGAG-SLDELAAAVLAFLDALG 195 (371)
T ss_pred EEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCC---CCCC-CHHHHHHHHHHHHHhcC
Confidence 467777775 4579999999999999999999999 8899999999999999643 1223 59999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC-CCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE-DYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
.++++++|||+||.+++.+|.++|++++++|++++........ .+...+.... ....+..+........ ..
T Consensus 196 ~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~ 267 (371)
T PRK14875 196 IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAE-------SRRELKPVLELLFADP-AL 267 (371)
T ss_pred CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhccc-------chhHHHHHHHHHhcCh-hh
Confidence 8999999999999999999999999999999998753221110 0000000000 0000001111000000 00
Q ss_pred CChHHHHHHHHhhcccC-chhhhhhhhh-----hcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEE
Q 024681 164 DVPAAVREFSRTLFNMR-PDISLFVSKT-----VFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 237 (264)
................. .......... ....+....+.++++|+++++|++|.++|.+..+.+. ++ .++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~---~~-~~~~ 343 (371)
T PRK14875 268 VTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP---DG-VAVH 343 (371)
T ss_pred CCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc---CC-CeEE
Confidence 00011111111100000 0000011111 0112334456788999999999999999987665432 34 7899
Q ss_pred EecCCCCcccccChhcHHHHHHHHhcC
Q 024681 238 LLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 238 ~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++||++++++|+++.+.|.+||++
T Consensus 344 ~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 344 VLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred EeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 999999999999999999999999974
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-31 Score=234.16 Aligned_cols=254 Identities=19% Similarity=0.255 Sum_probs=166.7
Q ss_pred eeEEEEeCC--CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCC-----CCcccchHHHHHHHHHH
Q 024681 7 ALHVRVVGT--GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYF-----DFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 7 ~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~-----~~~~~~~~~~~~~~~~~ 78 (264)
.++|++.|+ ++|+|||+||++++...|..++..| ++|+|+++|+||||.|..... ....+ +++++++++.+
T Consensus 1359 ~i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~-si~~~a~~l~~ 1437 (1655)
T PLN02980 1359 LIKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTL-SVELVADLLYK 1437 (1655)
T ss_pred EEEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccC-CHHHHHHHHHH
Confidence 466777775 3579999999999999999999999 899999999999999964321 11234 49999999999
Q ss_pred HHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCC-ccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG-FEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 79 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
+++.++.++++++||||||.+++.+|.++|++|+++|++++.+........... ............ .....+...+.
T Consensus 1438 ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~--~g~~~~~~~~~ 1515 (1655)
T PLN02980 1438 LIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLID--HGLEIFLENWY 1515 (1655)
T ss_pred HHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHh--hhHHHHHHHhc
Confidence 999999999999999999999999999999999999999876433211100000 000000000000 00001111100
Q ss_pred -cccCC--CCChHHHHHHHHhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 158 -PLAVG--ADVPAAVREFSRTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 158 -~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
..... ...+......................... ...+..+.+.++++|+|+|+|++|..++ +.++++.+.++
T Consensus 1516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~ 1594 (1655)
T PLN02980 1516 SGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIG 1594 (1655)
T ss_pred cHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcc
Confidence 00000 00011111111111111111111111111 1234456788999999999999999875 56677777776
Q ss_pred CC-----------ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 232 GR-----------NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 232 ~~-----------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+. +++++++++||++++|+|+++++.|.+||++
T Consensus 1595 ~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1595 KSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred ccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 51 4799999999999999999999999999963
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-31 Score=202.22 Aligned_cols=235 Identities=18% Similarity=0.182 Sum_probs=150.0
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC----CeEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV----NRCA 89 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 89 (264)
.+++||++||++++...|..++..| .||+|+++|+||||.|+... ....+++.+++|+.++++.+.. .+++
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~---~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~ 211 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH---GYVPSLDYVVEDTEAFLEKIRSENPGVPCF 211 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCCcCHHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 4469999999999999999999999 79999999999999997531 1112478889999999888742 3799
Q ss_pred EEecChhHHHHHHHHHhCC---CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhhhhhh-hcccccCC-C
Q 024681 90 YVGHSVSAMIGLLASIRRP---DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYEAWAY-GYAPLAVG-A 163 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~-~ 163 (264)
++||||||.+++.++. +| ++++++|+.+|....... .. .......+.. ....+.. ........ .
T Consensus 212 lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~--------~~-~~~~~~~l~~~~~p~~~~~~~~~~~~~~s 281 (395)
T PLN02652 212 LFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA--------HP-IVGAVAPIFSLVAPRFQFKGANKRGIPVS 281 (395)
T ss_pred EEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc--------hH-HHHHHHHHHHHhCCCCcccCcccccCCcC
Confidence 9999999999998765 55 479999999875322110 00 0001111100 0000000 00000000 0
Q ss_pred CChHHHHHHH-HhhcccCchhhhhhhhhh-cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEec
Q 024681 164 DVPAAVREFS-RTLFNMRPDISLFVSKTV-FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLK 240 (264)
Q Consensus 164 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~ 240 (264)
.......... .................. ........+.++++|+|+++|++|.++|++.++.+++.+++. +++++++
T Consensus 282 ~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ 361 (395)
T PLN02652 282 RDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYD 361 (395)
T ss_pred CCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEEC
Confidence 0111111111 000000000000000000 011234557788999999999999999999999998887643 7899999
Q ss_pred CCCCccccc-ChhcHHHHHHHHhc
Q 024681 241 IEGHLPHLS-APAIVGPVIRRALS 263 (264)
Q Consensus 241 ~~gH~~~~~-~~~~~~~~i~~fl~ 263 (264)
+++|.++.| .++++.+.+.+||+
T Consensus 362 ga~H~l~~e~~~e~v~~~I~~FL~ 385 (395)
T PLN02652 362 GFLHDLLFEPEREEVGRDIIDWME 385 (395)
T ss_pred CCeEEeccCCCHHHHHHHHHHHHH
Confidence 999998776 78999999999986
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-30 Score=196.10 Aligned_cols=252 Identities=17% Similarity=0.233 Sum_probs=152.7
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|...|+ +.++|||+||++++...+ .+...+ .+|+|+++|+||||.|+... ....+ +.+++++|+..++++
T Consensus 15 ~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~-~~~~~-~~~~~~~dl~~l~~~ 91 (306)
T TIGR01249 15 HQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHA-CLEEN-TTWDLVADIEKLREK 91 (306)
T ss_pred cEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCC-CcccC-CHHHHHHHHHHHHHH
Confidence 4688988886 356899999988776543 334444 68999999999999997542 11234 378999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCC--CC---ccHHHHHHHHHHHHhhh--hhhhhh
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH--GG---FEEAEIDKVFRAMEANY--EAWAYG 155 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~--~~~~~~ 155 (264)
++.++++++||||||.+++.++.++|++++++|++++.........+. .. .....+..+........ ..+...
T Consensus 92 l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (306)
T TIGR01249 92 LGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNA 171 (306)
T ss_pred cCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHH
Confidence 999999999999999999999999999999999998753321100000 00 00011111110100000 111111
Q ss_pred cccccCCCCChHH-------HHHHHH-hhcccCc---------hhhhhhhh---------hhc--CCccccccCCc-ccC
Q 024681 156 YAPLAVGADVPAA-------VREFSR-TLFNMRP---------DISLFVSK---------TVF--DTDLRGILGLV-RVP 206 (264)
Q Consensus 156 ~~~~~~~~~~~~~-------~~~~~~-~~~~~~~---------~~~~~~~~---------~~~--~~~~~~~~~~i-~~P 206 (264)
+........ ... ...+.. ......+ .....+.. ... ..+....+.++ ++|
T Consensus 172 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P 250 (306)
T TIGR01249 172 YHDRLQSGD-EETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILDNISKIRNIP 250 (306)
T ss_pred HHHHccCCC-HHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHHhhhhccCCC
Confidence 111111111 110 000110 1111100 00000000 000 11123455666 589
Q ss_pred EEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccC-hhcHHHHHHHHh
Q 024681 207 CVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSA-PAIVGPVIRRAL 262 (264)
Q Consensus 207 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl 262 (264)
+++++|++|.++|.+.++.+++.+++ .++++++++||.++.+. .+.+.+.+.+||
T Consensus 251 ~lii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 251 TYIVHGRYDLCCPLQSAWALHKAFPE-AELKVTNNAGHSAFDPNNLAALVHALETYL 306 (306)
T ss_pred eEEEecCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCCCCChHHHHHHHHHHHHhC
Confidence 99999999999999999999999998 89999999999986432 244555555543
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=190.12 Aligned_cols=248 Identities=17% Similarity=0.166 Sum_probs=162.5
Q ss_pred eeeEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 6 ~~~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
..++|..+-. ...+||++||++.+..-|..++..| +||.|+++|+||||.|.. .......++.++.+|+.+++
T Consensus 20 ~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r--~~rg~~~~f~~~~~dl~~~~ 97 (298)
T COG2267 20 TRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPR--GQRGHVDSFADYVDDLDAFV 97 (298)
T ss_pred ceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCC--CCcCCchhHHHHHHHHHHHH
Confidence 3456665543 2258999999999999999999999 999999999999999972 11234446899999999999
Q ss_pred HHhC----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 81 DTLG----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 81 ~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
+... ..+++++||||||.+++.++.+++.+++++|+.+|...... ........... ......+...+
T Consensus 98 ~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~------~~~~~~~~~~~---~~~~~~~~p~~ 168 (298)
T COG2267 98 ETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG------AILRLILARLA---LKLLGRIRPKL 168 (298)
T ss_pred HHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh------hHHHHHHHHHh---ccccccccccc
Confidence 8875 25999999999999999999999999999999999643221 00000000000 00111111100
Q ss_pred --cc----c---cCCCCChHHHHHHHHhhc-ccCchhhhhhhhhhcC--CccccccCCcccCEEEEecCCCCCcc-hhhH
Q 024681 157 --AP----L---AVGADVPAAVREFSRTLF-NMRPDISLFVSKTVFD--TDLRGILGLVRVPCVIIQTSKDVSVP-VSVA 223 (264)
Q Consensus 157 --~~----~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~-~~~~ 223 (264)
.. . ......+...+.+..... .........+...... ........++++|+|+++|++|.+++ .+..
T Consensus 169 ~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~ 248 (298)
T COG2267 169 PVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGL 248 (298)
T ss_pred ccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHH
Confidence 00 0 001111222333332221 1111111111111111 12334466789999999999999999 6888
Q ss_pred HHHHHHcCCC-ceEEEecCCCCcccccCh---hcHHHHHHHHhcC
Q 024681 224 EYLQRHLGGR-NTVELLKIEGHLPHLSAP---AIVGPVIRRALSR 264 (264)
Q Consensus 224 ~~~~~~~~~~-~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 264 (264)
.++.+..... +++.+++|+.|.++.|.. +++.+.+.+|+.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 249 ARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred HHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 8887777553 689999999998777753 7888888888853
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-30 Score=180.20 Aligned_cols=239 Identities=17% Similarity=0.203 Sum_probs=163.0
Q ss_pred ceEEEecCCCCCh-hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC------CCeE
Q 024681 18 RILVLAHGFGTDQ-SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG------VNRC 88 (264)
Q Consensus 18 p~vv~~hG~~~~~-~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 88 (264)
..|+++||++... ..|..++..| .||.|+++|++|||.|+... .-..+++..++|+....+... ..+.
T Consensus 55 ~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~---~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~ 131 (313)
T KOG1455|consen 55 GLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLH---AYVPSFDLVVDDVISFFDSIKEREENKGLPR 131 (313)
T ss_pred eEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCc---ccCCcHHHHHHHHHHHHHHHhhccccCCCCe
Confidence 4899999999876 7888899999 99999999999999998631 112368899999998888642 2389
Q ss_pred EEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC--CCh
Q 024681 89 AYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA--DVP 166 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 166 (264)
.|+||||||.+++.++.+.|+..+++|+++|-........ ..+....++..+......|...-....... ..+
T Consensus 132 FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~k-----p~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp 206 (313)
T KOG1455|consen 132 FLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTK-----PHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDP 206 (313)
T ss_pred eeeecCcchHHHHHHHhhCCcccccceeeecccccCCccC-----CCcHHHHHHHHHHHhCCceeecCCccccccccCCH
Confidence 9999999999999999999999999999998644322211 122233333333333344431111101111 111
Q ss_pred HHHHHHHHhhcccCch-hhhhhhhhh-cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCC
Q 024681 167 AAVREFSRTLFNMRPD-ISLFVSKTV-FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEG 243 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~g 243 (264)
................ ......+.+ ...+....+.++++|.+++||+.|.+++++.++.+++..+.. +++.++||.=
T Consensus 207 ~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~ 286 (313)
T KOG1455|consen 207 EKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMW 286 (313)
T ss_pred HHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHH
Confidence 1222222222211111 222222222 134556778899999999999999999999999999998765 8999999999
Q ss_pred Ccccc----cChhcHHHHHHHHhcC
Q 024681 244 HLPHL----SAPAIVGPVIRRALSR 264 (264)
Q Consensus 244 H~~~~----~~~~~~~~~i~~fl~~ 264 (264)
|.++. |+-+.|...|.+||++
T Consensus 287 H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 287 HSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HHhhcCCCchhHHHHHHHHHHHHHh
Confidence 98775 2336778888888863
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=188.80 Aligned_cols=262 Identities=18% Similarity=0.252 Sum_probs=172.8
Q ss_pred CCcc--eeeEEEEeCC----CCceEEEecCCCCChh-------------hHHHhhh---hc--CCceEEEecCCCCCCCC
Q 024681 2 GDLL--EALHVRVVGT----GDRILVLAHGFGTDQS-------------AWQRILP---YL--NHHRVIMFDLVCAGSVN 57 (264)
Q Consensus 2 g~~~--~~~~~~~~g~----~~p~vv~~hG~~~~~~-------------~~~~~~~---~l--~g~~v~~~d~~g~G~s~ 57 (264)
|+.+ -++.|+.+|. +.++||++|++.+++. .|..++- .| ..|.||++|..|-|.|+
T Consensus 35 G~~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~ 114 (389)
T PRK06765 35 GRTIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVK 114 (389)
T ss_pred CCCcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCC
Confidence 5554 5789999996 2479999999988642 2666553 45 79999999999976532
Q ss_pred CC--------CC----------CCcccchHHHHHHHHHHHHHHhCCCeEE-EEecChhHHHHHHHHHhCCCccceeEEec
Q 024681 58 PD--------YF----------DFRRYTTLDAYVDDLLNILDTLGVNRCA-YVGHSVSAMIGLLASIRRPDLFTKLILIG 118 (264)
Q Consensus 58 ~~--------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~ 118 (264)
.+ .. +...+ +++++++++..++++++++++. ++||||||.+++.+|.++|++|+++|+++
T Consensus 115 ~p~~g~tgp~s~~p~tg~~~~~~fP~~-t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia 193 (389)
T PRK06765 115 DPNVITTGPASINPKTGKPYGMDFPVV-TILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVI 193 (389)
T ss_pred CCCCCCCCCCCCCcCCCCccCCCCCcC-cHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEe
Confidence 11 00 12235 4999999999999999999986 99999999999999999999999999998
Q ss_pred CCCCCCCCC----------------CCCCCc------cHHHHHHHHH--HHHhhhhhh-hhhccccc-CCC------CCh
Q 024681 119 ASPRFLNDE----------------DYHGGF------EEAEIDKVFR--AMEANYEAW-AYGYAPLA-VGA------DVP 166 (264)
Q Consensus 119 ~~~~~~~~~----------------~~~~~~------~~~~~~~~~~--~~~~~~~~~-~~~~~~~~-~~~------~~~ 166 (264)
+.+...... .+..+. ....+..... ........+ ...+.... ... ...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~ 273 (389)
T PRK06765 194 GNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTL 273 (389)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccch
Confidence 864421110 000000 0011110000 000001111 11111110 000 000
Q ss_pred HHHHHHH-----HhhcccCchhhhhhhhhhcCC-------ccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC--
Q 024681 167 AAVREFS-----RTLFNMRPDISLFVSKTVFDT-------DLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG-- 232 (264)
Q Consensus 167 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-- 232 (264)
...+.+. +.....++..+......+... +..+.+.++++|+|+|+|++|.++|++..+++.+.+++
T Consensus 274 ~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~ 353 (389)
T PRK06765 274 TSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQG 353 (389)
T ss_pred hhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC
Confidence 0122222 223344555555444444333 45667889999999999999999999999999999862
Q ss_pred -CceEEEecC-CCCcccccChhcHHHHHHHHhcC
Q 024681 233 -RNTVELLKI-EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 233 -~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.++++++++ +||+.++++|+++.+.|.+||++
T Consensus 354 ~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 354 KYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 278999985 99999999999999999999974
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=172.40 Aligned_cols=240 Identities=15% Similarity=0.148 Sum_probs=169.4
Q ss_pred eeeEEEEeCCCCceEEEecCCC-CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFG-TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~-~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+++|...|.+...|++++|.- +....|.+....| ..++|+++|-||+|.|.++..+..--. +..-+++...+++
T Consensus 31 ~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~f-f~~Da~~avdLM~ 109 (277)
T KOG2984|consen 31 TQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQF-FMKDAEYAVDLME 109 (277)
T ss_pred ceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHH-HHHhHHHHHHHHH
Confidence 4688999999888999999954 5557888887777 459999999999999988754443332 5666777788999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
.+..+++.++|||-||..|+..|+++++.|.++|+.++......... ..+..+ .....|......-..
T Consensus 110 aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~-----------ma~kgi-Rdv~kWs~r~R~P~e 177 (277)
T KOG2984|consen 110 ALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA-----------MAFKGI-RDVNKWSARGRQPYE 177 (277)
T ss_pred HhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH-----------HHHhch-HHHhhhhhhhcchHH
Confidence 99999999999999999999999999999999999998654322110 011111 122333322221111
Q ss_pred CCCChH-HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec
Q 024681 162 GADVPA-AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240 (264)
Q Consensus 162 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (264)
.....+ ..+.+.+.. ....++.......-.+..+++++||+++++|+.|++++......+....+. +++.+.|
T Consensus 178 ~~Yg~e~f~~~wa~wv-----D~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~-a~~~~~p 251 (277)
T KOG2984|consen 178 DHYGPETFRTQWAAWV-----DVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSL-AKVEIHP 251 (277)
T ss_pred HhcCHHHHHHHHHHHH-----HHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhccc-ceEEEcc
Confidence 111111 111111110 001111111111113456889999999999999999999888888888888 8999999
Q ss_pred CCCCcccccChhcHHHHHHHHhcC
Q 024681 241 IEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.++|.+++..+++|+..+.+||++
T Consensus 252 eGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 252 EGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred CCCcceeeechHHHHHHHHHHHhc
Confidence 999999999999999999999974
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=206.09 Aligned_cols=253 Identities=17% Similarity=0.228 Sum_probs=153.9
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|...|+ +.|+|||+||++++...|..+.+.| ++|+|+++|+||||.|+... ....|+ ++++++|+..+++.++
T Consensus 14 ~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~-~~~~~~-~~~~a~dl~~~i~~l~ 91 (582)
T PRK05855 14 RLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPK-RTAAYT-LARLADDFAAVIDAVS 91 (582)
T ss_pred EEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCC-cccccC-HHHHHHHHHHHHHHhC
Confidence 577888886 4589999999999999999999999 99999999999999997532 123454 9999999999999998
Q ss_pred CCe-EEEEecChhHHHHHHHHHh--CCCccceeEEecCCCCCCCCCCCCCCc---cHHHHHHHHHHHHhhhhhhh---hh
Q 024681 85 VNR-CAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASPRFLNDEDYHGGF---EEAEIDKVFRAMEANYEAWA---YG 155 (264)
Q Consensus 85 ~~~-~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~ 155 (264)
.++ ++|+||||||.+++.++.+ .++++..++.++++............. .................... ..
T Consensus 92 ~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (582)
T PRK05855 92 PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPV 171 (582)
T ss_pred CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCC
Confidence 765 9999999999999888776 234455554444321100000000000 00001111111000000000 00
Q ss_pred cccccCCCCChHHHHHHHHhhcccCc-------------hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRP-------------DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV 222 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 222 (264)
..................+....... .....................+++|+++|+|++|.++|++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~ 251 (582)
T PRK05855 172 LPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPAL 251 (582)
T ss_pred CcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHH
Confidence 00000000000000000000000000 00000000011111122345589999999999999999999
Q ss_pred HHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 223 AEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+.+.+.+++ .++++++ +||+++.|+|+++.+.|.+|+.
T Consensus 252 ~~~~~~~~~~-~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 290 (582)
T PRK05855 252 YDDLSRWVPR-LWRREIK-AGHWLPMSHPQVLAAAVAEFVD 290 (582)
T ss_pred hccccccCCc-ceEEEcc-CCCcchhhChhHHHHHHHHHHH
Confidence 9999888887 7888877 7999999999999999999986
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-29 Score=191.28 Aligned_cols=241 Identities=18% Similarity=0.212 Sum_probs=144.8
Q ss_pred CCCceEEEecCCCCChhh-H-HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC----C
Q 024681 15 TGDRILVLAHGFGTDQSA-W-QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV----N 86 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~-~-~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 86 (264)
+++|+||++||+++++.. | ..++..+ +||+|+++|+||||.|.... +..| .....+|+.++++++.. .
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~--~~~~--~~~~~~Dl~~~i~~l~~~~~~~ 173 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT--PQFY--SASFTGDLRQVVDHVAGRYPSA 173 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC--cCEE--cCCchHHHHHHHHHHHHHCCCC
Confidence 356899999999776542 4 5566555 99999999999999996531 2222 24567778777777754 5
Q ss_pred eEEEEecChhHHHHHHHHHhCCCc--cceeEEecCCCCCC-CCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccc--cC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDL--FTKLILIGASPRFL-NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPL--AV 161 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 161 (264)
+++++||||||.+++.++.++|++ |.++++++++.... ....+...+.......+...+..........+... .+
T Consensus 174 ~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~ 253 (388)
T PLN02511 174 NLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEY 253 (388)
T ss_pred CEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 899999999999999999999987 88888887643220 00001111100000001111111000000000000 00
Q ss_pred CCC---ChHHHHHHHHhhccc--CchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH-HHHHHHcCCCce
Q 024681 162 GAD---VPAAVREFSRTLFNM--RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA-EYLQRHLGGRNT 235 (264)
Q Consensus 162 ~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~ 235 (264)
... ......++...+... .......+ +...+....+.+|++|+|+|+|++|+++|.+.. ....+.+++ ++
T Consensus 254 ~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~y---y~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~-~~ 329 (388)
T PLN02511 254 NIPLVANAKTVRDFDDGLTRVSFGFKSVDAY---YSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPN-CL 329 (388)
T ss_pred CHHHHHhCCCHHHHHHhhhhhcCCCCCHHHH---HHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC-EE
Confidence 000 000111111111110 00001111 112344567889999999999999999997754 456677888 89
Q ss_pred EEEecCCCCcccccChhc------HHHHHHHHhc
Q 024681 236 VELLKIEGHLPHLSAPAI------VGPVIRRALS 263 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~~~------~~~~i~~fl~ 263 (264)
+++++++||+.++|+|+. +.+.+.+||+
T Consensus 330 l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 330 LIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred EEECCCcceeccccCCCCCCCCccHHHHHHHHHH
Confidence 999999999999999876 4888888885
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=165.36 Aligned_cols=221 Identities=19% Similarity=0.242 Sum_probs=156.0
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEEEEe
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCAYVG 92 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G 92 (264)
..|+|+||+.++....+.+.+.| +||.|+++.+||||..... .-.. +.++|.+++.+..+.+ +.+.|.++|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~---fl~t-~~~DW~~~v~d~Y~~L~~~gy~eI~v~G 91 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED---FLKT-TPRDWWEDVEDGYRDLKEAGYDEIAVVG 91 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH---HhcC-CHHHHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 59999999999999999999999 9999999999999988532 1122 3666666666555544 678999999
Q ss_pred cChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHH
Q 024681 93 HSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREF 172 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
-||||.+++.+|.++| ++++|.++++....... ..+..+..... .... +.....+..+..
T Consensus 92 lSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~--------~iie~~l~y~~-~~kk---------~e~k~~e~~~~e 151 (243)
T COG1647 92 LSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR--------IIIEGLLEYFR-NAKK---------YEGKDQEQIDKE 151 (243)
T ss_pred ecchhHHHHHHHhhCC--ccceeeecCCcccccch--------hhhHHHHHHHH-Hhhh---------ccCCCHHHHHHH
Confidence 9999999999999998 89999999864322211 11111221111 1111 112223334444
Q ss_pred HHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCCCccccc-C
Q 024681 173 SRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGHLPHLS-A 250 (264)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~-~ 250 (264)
++.+..........+... ..+....+..|..|++++.|.+|+.+|.+.+..+.+..... .++.+++++||.+..+ .
T Consensus 152 ~~~~~~~~~~~~~~~~~~--i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~E 229 (243)
T COG1647 152 MKSYKDTPMTTTAQLKKL--IKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKE 229 (243)
T ss_pred HHHhhcchHHHHHHHHHH--HHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchh
Confidence 444433223332222221 12344567889999999999999999999999999887543 8999999999976665 4
Q ss_pred hhcHHHHHHHHhcC
Q 024681 251 PAIVGPVIRRALSR 264 (264)
Q Consensus 251 ~~~~~~~i~~fl~~ 264 (264)
.+++.+.+..||+.
T Consensus 230 rd~v~e~V~~FL~~ 243 (243)
T COG1647 230 RDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHHHHhhC
Confidence 58999999999973
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-29 Score=177.53 Aligned_cols=232 Identities=19% Similarity=0.243 Sum_probs=160.5
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC----CCeE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG----VNRC 88 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 88 (264)
..|+++++||+.++...|+.+...| -+-.|+++|.|.||.|... ..+ +.+.+++|+..+++..+ ..++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~----~~h-~~~~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI----TVH-NYEAMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccc----ccc-CHHHHHHHHHHHHHHcccccccCCc
Confidence 4589999999999999999999999 5779999999999999764 223 37889999999999884 5799
Q ss_pred EEEecChhH-HHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh---------hhhhhhhhccc
Q 024681 89 AYVGHSVSA-MIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA---------NYEAWAYGYAP 158 (264)
Q Consensus 89 ~l~G~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 158 (264)
+++|||||| .+++..+...|+.+..+|+++.+|...... .......+..+.. ........+..
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~-------~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~ 198 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRS-------YGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE 198 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcc-------cchHHHHHHHHHhccccccccccHHHHHHHHHH
Confidence 999999999 778888889999999999999876421111 0011111111110 00000001111
Q ss_pred ccCCCCChHHHHHHHHhhc-----------ccCchhhhhhhhhhcCCcccccc--CCcccCEEEEecCCCCCcchhhHHH
Q 024681 159 LAVGADVPAAVREFSRTLF-----------NMRPDISLFVSKTVFDTDLRGIL--GLVRVPCVIIQTSKDVSVPVSVAEY 225 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~ 225 (264)
.. .+..+..+...-. ..+.......+.......++..+ .....||+++.|.++.+++.+...+
T Consensus 199 ~~----~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~ 274 (315)
T KOG2382|consen 199 VG----FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPR 274 (315)
T ss_pred Hh----cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHH
Confidence 00 0011111111111 11222223333332122222333 5568899999999999999999999
Q ss_pred HHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 226 LQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 226 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+.+.+|+ +++..++++||+++.|+|+++.+.|.+|+.+
T Consensus 275 ~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 275 MEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred HHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 9999999 9999999999999999999999999999864
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-28 Score=183.34 Aligned_cols=251 Identities=14% Similarity=0.081 Sum_probs=150.6
Q ss_pred eEEEEeCC--CCceEEEecCCCCChh-hH-------------------------HHhhhhc--CCceEEEecCCCCCCCC
Q 024681 8 LHVRVVGT--GDRILVLAHGFGTDQS-AW-------------------------QRILPYL--NHHRVIMFDLVCAGSVN 57 (264)
Q Consensus 8 ~~~~~~g~--~~p~vv~~hG~~~~~~-~~-------------------------~~~~~~l--~g~~v~~~d~~g~G~s~ 57 (264)
|+++.+.. .+.+|+++||++++.. .| ..+++.| +||+|+++|+||||.|.
T Consensus 10 l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~ 89 (332)
T TIGR01607 10 LKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESD 89 (332)
T ss_pred EEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCc
Confidence 55555432 3459999999999885 21 3578888 89999999999999997
Q ss_pred CCCCCCcccchHHHHHHHHHHHHHHhC------------------------CCeEEEEecChhHHHHHHHHHhCCC----
Q 024681 58 PDYFDFRRYTTLDAYVDDLLNILDTLG------------------------VNRCAYVGHSVSAMIGLLASIRRPD---- 109 (264)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~l~G~S~Gg~~a~~~a~~~p~---- 109 (264)
..........+++++++|+..+++.+. ..|++|+||||||.+++.++.++++
T Consensus 90 ~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~ 169 (332)
T TIGR01607 90 GLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNEN 169 (332)
T ss_pred cccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcccccc
Confidence 532212222369999999999887642 2479999999999999999876542
Q ss_pred ----ccceeEEecCCCCCCCCCCCCCCcc-HHHHHHHHHHHHhhhhhhhhhcc--cccCCCCChHHHHHHHHhhcccCch
Q 024681 110 ----LFTKLILIGASPRFLNDEDYHGGFE-EAEIDKVFRAMEANYEAWAYGYA--PLAVGADVPAAVREFSRTLFNMRPD 182 (264)
Q Consensus 110 ----~v~~~vl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (264)
.++++|+++|......... ..... ......+...+. .+...+. ........+...+.+..........
T Consensus 170 ~~~~~i~g~i~~s~~~~i~~~~~-~~~~~~~~~~~~l~~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~ 244 (332)
T TIGR01607 170 NDKLNIKGCISLSGMISIKSVGS-DDSFKFKYFYLPVMNFMS----RVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDGG 244 (332)
T ss_pred ccccccceEEEeccceEEecccC-CCcchhhhhHHHHHHHHH----HHCCcccccCccccccChhhhhHHhcCccccCCc
Confidence 5889998887532211000 00000 000111111111 1111110 0000001111222222211111111
Q ss_pred hhhhhhhhhcC--CccccccCCc--ccCEEEEecCCCCCcchhhHHHHHHHcCC-CceEEEecCCCCcccccC-hhcHHH
Q 024681 183 ISLFVSKTVFD--TDLRGILGLV--RVPCVIIQTSKDVSVPVSVAEYLQRHLGG-RNTVELLKIEGHLPHLSA-PAIVGP 256 (264)
Q Consensus 183 ~~~~~~~~~~~--~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~-~~~~~~ 256 (264)
....+...+.. ......+.++ ++|+|+++|++|.+++++.++.+.+.+.. .+++.++++++|.++.|. ++++.+
T Consensus 245 ~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~ 324 (332)
T TIGR01607 245 ITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLK 324 (332)
T ss_pred ccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHH
Confidence 11111111111 0112233444 78999999999999999999998877642 278999999999998875 688999
Q ss_pred HHHHHhc
Q 024681 257 VIRRALS 263 (264)
Q Consensus 257 ~i~~fl~ 263 (264)
.|.+||+
T Consensus 325 ~i~~wL~ 331 (332)
T TIGR01607 325 KIIEWIS 331 (332)
T ss_pred HHHHHhh
Confidence 9999986
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-27 Score=176.52 Aligned_cols=242 Identities=15% Similarity=0.062 Sum_probs=137.6
Q ss_pred CCceEEEecCCCCChh--hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 16 GDRILVLAHGFGTDQS--AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~--~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
.+|+||++||++++.. .+..++..| +||+|+++|+||||.+.............++....+..+.+..+..+++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~v 136 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAV 136 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEE
Confidence 3579999999987643 346688888 899999999999998753211111111233433333334444566789999
Q ss_pred ecChhHHHHHHHHHhCCCc--cceeEEecCCCCCCCCCC-CCCCccHHHHHHH-HHHHHhhhhhhhhhcccccCCCCChH
Q 024681 92 GHSVSAMIGLLASIRRPDL--FTKLILIGASPRFLNDED-YHGGFEEAEIDKV-FRAMEANYEAWAYGYAPLAVGADVPA 167 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
||||||.+++.++.++++. +.++|+++++........ ...... ...... ...+..........+.... . ...+
T Consensus 137 G~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~-~-~~~~ 213 (324)
T PRK10985 137 GYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFS-RVYQRYLLNLLKANAARKLAAYPGTL-P-INLA 213 (324)
T ss_pred EecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHhccccc-c-CCHH
Confidence 9999999988888876544 889999987543211000 000000 000100 1111111111111111100 0 0111
Q ss_pred ------HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecC
Q 024681 168 ------AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241 (264)
Q Consensus 168 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (264)
...++.+... .+..............+....++++++|+++|+|++|++++++....+.+..++ .+++++++
T Consensus 214 ~~~~~~~~~~fd~~~~-~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~ 291 (324)
T PRK10985 214 QLKSVRRLREFDDLIT-ARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPN-VEYQLTEH 291 (324)
T ss_pred HHhcCCcHHHHhhhhe-eccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCC-eEEEECCC
Confidence 1111111111 111111111222222334566789999999999999999998888888777777 89999999
Q ss_pred CCCcccccCh-----hcHHHHHHHHh
Q 024681 242 EGHLPHLSAP-----AIVGPVIRRAL 262 (264)
Q Consensus 242 ~gH~~~~~~~-----~~~~~~i~~fl 262 (264)
+||+.+.+.. .-.-+.+.+|+
T Consensus 292 ~GH~~~~~g~~~~~~~w~~~~~~~~~ 317 (324)
T PRK10985 292 GGHVGFVGGTLLKPQMWLEQRIPDWL 317 (324)
T ss_pred CCceeeCCCCCCCCCccHHHHHHHHH
Confidence 9999888742 24455566665
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=168.11 Aligned_cols=200 Identities=18% Similarity=0.191 Sum_probs=127.7
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCC-CCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCA-GSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCA 89 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 89 (264)
..++||++||++.+...+..+++.| +||+|+.+|.||+ |.|+... ... +......|+.++++++ +.+++.
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~---~~~-t~s~g~~Dl~aaid~lk~~~~~~I~ 111 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI---DEF-TMSIGKNSLLTVVDWLNTRGINNLG 111 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc---ccC-cccccHHHHHHHHHHHHhcCCCceE
Confidence 3479999999999988899999999 9999999999987 9996532 122 2333467776666665 456899
Q ss_pred EEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC----
Q 024681 90 YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV---- 165 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 165 (264)
|+||||||.+|+..|... .++++|+.+|..... ..+.. .+...+. .+.........
T Consensus 112 LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~-----------d~l~~---~~~~~~~----~~p~~~lp~~~d~~g 171 (307)
T PRK13604 112 LIAASLSARIAYEVINEI--DLSFLITAVGVVNLR-----------DTLER---ALGYDYL----SLPIDELPEDLDFEG 171 (307)
T ss_pred EEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH-----------HHHHH---hhhcccc----cCccccccccccccc
Confidence 999999999997777643 389999998864310 00110 0000000 00000000000
Q ss_pred hHH-HHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC-CCceEEEecCCC
Q 024681 166 PAA-VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG-GRNTVELLKIEG 243 (264)
Q Consensus 166 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 243 (264)
... ...+.......+... .....+.++++++|+|+|||++|.++|.+.++.+.+.++ ..+++++++|++
T Consensus 172 ~~l~~~~f~~~~~~~~~~~---------~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~ 242 (307)
T PRK13604 172 HNLGSEVFVTDCFKHGWDT---------LDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSS 242 (307)
T ss_pred ccccHHHHHHHHHhcCccc---------cccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCc
Confidence 000 011111111110000 011124456678999999999999999999999999886 238999999999
Q ss_pred Ccccc
Q 024681 244 HLPHL 248 (264)
Q Consensus 244 H~~~~ 248 (264)
|.+..
T Consensus 243 H~l~~ 247 (307)
T PRK13604 243 HDLGE 247 (307)
T ss_pred cccCc
Confidence 98763
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-26 Score=169.19 Aligned_cols=229 Identities=14% Similarity=0.108 Sum_probs=137.3
Q ss_pred CCceEEEecCCCC----ChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-----C
Q 024681 16 GDRILVLAHGFGT----DQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-----G 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~----~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 84 (264)
.+++||++||++. +...|..+++.| +||+|+++|+||||.|.... + +++++.+|+.++++.+ +
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~-----~-~~~~~~~d~~~~~~~l~~~~~g 98 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN-----L-GFEGIDADIAAAIDAFREAAPH 98 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-----C-CHHHHHHHHHHHHHHHHhhCCC
Confidence 4467888887553 344567788888 79999999999999986431 2 3667778888777776 4
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
.++++++|||+||.+++.+|.. +++|+++|+++|...... ....................|.... .+..
T Consensus 99 ~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~ 167 (274)
T TIGR03100 99 LRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEA------AQAASRIRHYYLGQLLSADFWRKLL----SGEV 167 (274)
T ss_pred CCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcc------cchHHHHHHHHHHHHhChHHHHHhc----CCCc
Confidence 5789999999999999999865 468999999997522111 0001111111111111111111111 1111
Q ss_pred C-hHHHHHHHHhhccc-CchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-----HHHHHHHc--CCCce
Q 024681 165 V-PAAVREFSRTLFNM-RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-----AEYLQRHL--GGRNT 235 (264)
Q Consensus 165 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-----~~~~~~~~--~~~~~ 235 (264)
. ....+.+....... .+....... ....+....+..+++|+++++|+.|...+.-. ...+.+.+ ++ ++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~-v~ 244 (274)
T TIGR03100 168 NLGSSLRGLGDALLKARQKGDEVAHG--GLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPG-IE 244 (274)
T ss_pred cHHHHHHHHHHHHHhhhhcCCCcccc--hHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCC-eE
Confidence 1 11122222211101 000000000 01223344566779999999999998864221 14555555 56 89
Q ss_pred EEEecCCCCcccccC-hhcHHHHHHHHhcC
Q 024681 236 VELLKIEGHLPHLSA-PAIVGPVIRRALSR 264 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~ 264 (264)
++.+++++|++..+. ++++.+.|.+||++
T Consensus 245 ~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 245 RVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred EEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 999999999985554 59999999999975
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-26 Score=176.77 Aligned_cols=210 Identities=13% Similarity=0.100 Sum_probs=135.2
Q ss_pred CCceEEEecCCCCCh-hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEE
Q 024681 16 GDRILVLAHGFGTDQ-SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCA 89 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~-~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 89 (264)
..|+||+.||+++.. ..|..+.+.| +||+|+++|+||+|.|...... . +......++.+.+... +.+++.
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~---~-d~~~~~~avld~l~~~~~vd~~ri~ 268 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT---Q-DSSLLHQAVLNALPNVPWVDHTRVA 268 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc---c-cHHHHHHHHHHHHHhCcccCcccEE
Confidence 346777766766653 5688888888 8999999999999999643111 1 2344445555555544 557999
Q ss_pred EEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC-CCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHH
Q 024681 90 YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND-EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAA 168 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
++|||+||.+++.+|..+|++++++|+++++...... ...... ...+. ... +...+. ........
T Consensus 269 l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~-----~p~~~---~~~---la~~lg---~~~~~~~~ 334 (414)
T PRK05077 269 AFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ-----VPEMY---LDV---LASRLG---MHDASDEA 334 (414)
T ss_pred EEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh-----chHHH---HHH---HHHHhC---CCCCChHH
Confidence 9999999999999999999999999999886431100 000000 00000 000 000000 00111111
Q ss_pred HHHHHHhhcccCchhhhhhhhhhcCCccccc-cCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccc
Q 024681 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGI-LGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPH 247 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 247 (264)
.. ..+ ..+.. ..... ..++++|+|+|+|++|.++|.+.++.+.+..++ .+++++|++ ++
T Consensus 335 l~---~~l------------~~~sl-~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~-~~l~~i~~~---~~ 394 (414)
T PRK05077 335 LR---VEL------------NRYSL-KVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSAD-GKLLEIPFK---PV 394 (414)
T ss_pred HH---HHh------------hhccc-hhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCC-CeEEEccCC---Cc
Confidence 11 110 00000 00011 156899999999999999999999999999988 899999976 45
Q ss_pred ccChhcHHHHHHHHhc
Q 024681 248 LSAPAIVGPVIRRALS 263 (264)
Q Consensus 248 ~~~~~~~~~~i~~fl~ 263 (264)
.+.++++.+.+.+||+
T Consensus 395 ~e~~~~~~~~i~~wL~ 410 (414)
T PRK05077 395 YRNFDKALQEISDWLE 410 (414)
T ss_pred cCCHHHHHHHHHHHHH
Confidence 6799999999999986
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=175.44 Aligned_cols=246 Identities=16% Similarity=0.199 Sum_probs=155.2
Q ss_pred cceeeEEEEeCC--CCceEEEecCCCCChhhHH-----Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHH
Q 024681 4 LLEALHVRVVGT--GDRILVLAHGFGTDQSAWQ-----RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 4 ~~~~~~~~~~g~--~~p~vv~~hG~~~~~~~~~-----~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
.++-++|....+ .++|||++||+......|+ .+++.| +||+|+++|++|+|.|.... ....|. .+.+.+
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~-~~ddY~-~~~i~~ 250 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK-TFDDYI-RDGVIA 250 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC-ChhhhH-HHHHHH
Confidence 456677766543 4579999999988877774 688888 89999999999999885431 234454 566777
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHH----HHHHhC-CCccceeEEecCCCCCCCCCCCCCCccHHHH---HHHHH---
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGL----LASIRR-PDLFTKLILIGASPRFLNDEDYHGGFEEAEI---DKVFR--- 143 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 143 (264)
.+..+++.++.++++++||||||.++. .+++.. +++|++++++++...+..............+ .....
T Consensus 251 al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G 330 (532)
T TIGR01838 251 ALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGG 330 (532)
T ss_pred HHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcC
Confidence 788888888999999999999999852 245555 7889999999998766543222111111111 11111
Q ss_pred ------------HHHhhhhhhhhhcccccCCCCChH-HHHHHHHhhcccCchhhhhhhhhhcC-----------Cccccc
Q 024681 144 ------------AMEANYEAWAYGYAPLAVGADVPA-AVREFSRTLFNMRPDISLFVSKTVFD-----------TDLRGI 199 (264)
Q Consensus 144 ------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 199 (264)
.+...-..|............... .+..+..............+++.+.. .+....
T Consensus 331 ~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~d 410 (532)
T TIGR01838 331 YLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLD 410 (532)
T ss_pred CCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecc
Confidence 111100001111111111111100 11111111222222223333322221 233456
Q ss_pred cCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChh
Q 024681 200 LGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPA 252 (264)
Q Consensus 200 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 252 (264)
+.+|++|+++++|++|.++|.+.++.+.+.+++ .+..+++++||..++++|.
T Consensus 411 L~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~-~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 411 LSKVKVPVYIIATREDHIAPWQSAYRGAALLGG-PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred hhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCC-CEEEEECCCCCchHhhCCC
Confidence 788999999999999999999999999999998 7888999999999988874
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-27 Score=170.05 Aligned_cols=215 Identities=24% Similarity=0.303 Sum_probs=134.6
Q ss_pred ceEEEecCCCCCCCCC-CCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 43 HRVIMFDLVCAGSVNP-DYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 43 ~~v~~~d~~g~G~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
|+|+++|+||+|.|++ .......|+ .+++++++..+++.++.++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYT-TDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHC-HHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCccccc-HHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7899999999999985 012456665 99999999999999999999999999999999999999999999999999852
Q ss_pred C---CCCCCCCCCCccHHHHH-HHHHHHHhhhhhhhhhccc--ccCCCC-ChHH-HHHHHHhhccc-Cchhhh----hhh
Q 024681 122 R---FLNDEDYHGGFEEAEID-KVFRAMEANYEAWAYGYAP--LAVGAD-VPAA-VREFSRTLFNM-RPDISL----FVS 188 (264)
Q Consensus 122 ~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~-~~~~~~~~~~~-~~~~~~----~~~ 188 (264)
. ......+.......... ................... ...... .... ........... ...... ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNAL 159 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccc
Confidence 0 00000000000000000 0000000000000000000 000000 0000 00000000000 000000 011
Q ss_pred hhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHH
Q 024681 189 KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 189 ~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
......+....+.++++|+++++|++|.++|++....+.+.+++ .++++++++||+.+.++|+++.+.|.
T Consensus 160 ~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 160 GYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 12223344456778999999999999999999999999999999 89999999999999999999998875
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=158.01 Aligned_cols=212 Identities=20% Similarity=0.178 Sum_probs=128.3
Q ss_pred eEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCC--Ccc-cchHHHHHHHHHHH
Q 024681 8 LHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFD--FRR-YTTLDAYVDDLLNI 79 (264)
Q Consensus 8 ~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~--~~~-~~~~~~~~~~~~~~ 79 (264)
++|...+. ..|+||++||++++...|..++..| +||+|+++|+||+|.+...... ... +.......+|+.++
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 44445432 2479999999999998999999999 7999999999999986322100 000 11112223444444
Q ss_pred HHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh
Q 024681 80 LDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA 153 (264)
Q Consensus 80 ~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
++.+ +.++++++|||+||.+++.++.++|+....++++++. .+ .......
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~-------- 150 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSG-YF---------------TSLARTL-------- 150 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcH-HH---------------HHHHHHh--------
Confidence 4432 3468999999999999999999888643344444331 00 0000000
Q ss_pred hhcccccCC-CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCc-ccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 154 YGYAPLAVG-ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLV-RVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 154 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
+...... ........... ......+....+.++ ++|+|+++|++|.++|++.++.+.+.++
T Consensus 151 --~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~ 213 (249)
T PRK10566 151 --FPPLIPETAAQQAEFNNIV---------------APLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALR 213 (249)
T ss_pred --cccccccccccHHHHHHHH---------------HHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 0000000 00000111111 111111222334555 6899999999999999999999998775
Q ss_pred CC-----ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 232 GR-----NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 232 ~~-----~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.. +++..++++||.+. + +..+.+.+||++
T Consensus 214 ~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 214 ERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred hcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 42 46778899999864 3 356777888763
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=149.87 Aligned_cols=182 Identities=12% Similarity=-0.007 Sum_probs=123.8
Q ss_pred ceEEEecCCCCChhhHHH--hhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 18 RILVLAHGFGTDQSAWQR--ILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~--~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
|+||++||++++...|.. +...+ .+|+|+++|+||++ ++.++++.++++.++.++++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 689999999999998874 34444 38999999999873 3477788899999988999999
Q ss_pred ecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 92 GHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
||||||.+++.+|.++|. .+|+++|+... ...+. ...... ... ...........
T Consensus 67 G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~-----------~~~~~---~~~~~~--------~~~-~~~~~~~~~~~ 120 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML---PAVVVNPAVRP-----------FELLT---DYLGEN--------ENP-YTGQQYVLESR 120 (190)
T ss_pred EECHHHHHHHHHHHHcCC---CEEEECCCCCH-----------HHHHH---HhcCCc--------ccc-cCCCcEEEcHH
Confidence 999999999999999983 46888875320 00000 000000 000 00000000011
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccCh
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAP 251 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 251 (264)
+.. .....+... +. ..+|+++++|++|.++|.+.+.++++. ++..+++|++|.+ +..
T Consensus 121 ~~~---------------d~~~~~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~ 177 (190)
T PRK11071 121 HIY---------------DLKVMQIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAF--VGF 177 (190)
T ss_pred HHH---------------HHHhcCCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECCCCcch--hhH
Confidence 111 111112112 22 577899999999999999999999984 4566889999987 444
Q ss_pred hcHHHHHHHHhc
Q 024681 252 AIVGPVIRRALS 263 (264)
Q Consensus 252 ~~~~~~i~~fl~ 263 (264)
+++.+.+.+|++
T Consensus 178 ~~~~~~i~~fl~ 189 (190)
T PRK11071 178 ERYFNQIVDFLG 189 (190)
T ss_pred HHhHHHHHHHhc
Confidence 889999999975
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=166.96 Aligned_cols=240 Identities=16% Similarity=0.177 Sum_probs=141.8
Q ss_pred CceEEEecCCCCChhhH-----HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHH-----HHHHHHHHhC
Q 024681 17 DRILVLAHGFGTDQSAW-----QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD-----DLLNILDTLG 84 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~-----~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 84 (264)
+++||++||+..+...+ +.+++.| +||+|+++|++|+|.|... + ++++++. .+..+.+..+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~------~-~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY------L-TLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc------C-CHHHHHHHHHHHHHHHHHHHhC
Confidence 45799999986655444 5788888 8999999999999987532 1 2444443 3444555567
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCcc-HHHHHHHHHHHHhhhhh------------
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFE-EAEIDKVFRAMEANYEA------------ 151 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------ 151 (264)
.++++++||||||.+++.++..+|++++++|+++++..+........... .................
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~ 214 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPF 214 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcc
Confidence 78999999999999999999999999999999998765433221110000 00000000000000000
Q ss_pred --hhhhcccccCCCCChHHHHHHH---Hhhcc---cCchhhhhhhhhhcC-----------CccccccCCcccCEEEEec
Q 024681 152 --WAYGYAPLAVGADVPAAVREFS---RTLFN---MRPDISLFVSKTVFD-----------TDLRGILGLVRVPCVIIQT 212 (264)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~P~l~i~g 212 (264)
....+.........++....+. ..... ........+...+.. ......++++++|+++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G 294 (350)
T TIGR01836 215 SLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYA 294 (350)
T ss_pred hhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEec
Confidence 0000000000001111111111 11111 111111111111110 0112346678999999999
Q ss_pred CCCCCcchhhHHHHHHHcCCC-ceEEEecCCCCcccccC---hhcHHHHHHHHhcC
Q 024681 213 SKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGHLPHLSA---PAIVGPVIRRALSR 264 (264)
Q Consensus 213 ~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 264 (264)
++|.++|++..+.+.+.+++. .++++++ +||...+.. ++++.+.|.+||.+
T Consensus 295 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 295 ERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 999999999999999998753 5667777 899766554 47899999999864
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-23 Score=151.89 Aligned_cols=251 Identities=28% Similarity=0.416 Sum_probs=151.9
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+.|...+...|+++++||++++...|......+ ..|+++.+|+||||.|. . . .+ +....++++..+++.
T Consensus 11 ~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~---~-~~-~~~~~~~~~~~~~~~ 84 (282)
T COG0596 11 RLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-P---A-GY-SLSAYADDLAALLDA 84 (282)
T ss_pred EEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-c---c-cc-cHHHHHHHHHHHHHH
Confidence 4556666655669999999999999888843333 12999999999999997 1 1 22 255559999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCC----CCccHHHHHHHHHHH-Hhhhhhhhhhc-
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH----GGFEEAEIDKVFRAM-EANYEAWAYGY- 156 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~- 156 (264)
++..+++++|||+||.+++.++.++|++++++|++++........... ............... ...........
T Consensus 85 ~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T COG0596 85 LGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALG 164 (282)
T ss_pred hCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccc
Confidence 998889999999999999999999999999999999865411100000 000001110000000 00000000000
Q ss_pred -ccccC-------CCCC-hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHH
Q 024681 157 -APLAV-------GADV-PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ 227 (264)
Q Consensus 157 -~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 227 (264)
..... .... ....................................++++|+++++|++|.+.|......+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~ 244 (282)
T COG0596 165 LLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLA 244 (282)
T ss_pred ccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHH
Confidence 00000 0000 00000000000000000000000011111233456677899999999999777766666677
Q ss_pred HHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 228 RHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 228 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+.++...++.+++++||+.+.++|+.+.+.+.+|++
T Consensus 245 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 245 AALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred hhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 777632689999999999999999999999888553
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-23 Score=158.72 Aligned_cols=245 Identities=14% Similarity=0.076 Sum_probs=142.0
Q ss_pred CceEEEecCCCCChhhHH------Hhhhhc--CCceEEEecCCCCCCCCC----C--CCCCcccchHHHHH-HHHHHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQ------RILPYL--NHHRVIMFDLVCAGSVNP----D--YFDFRRYTTLDAYV-DDLLNILD 81 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~------~~~~~l--~g~~v~~~d~~g~G~s~~----~--~~~~~~~~~~~~~~-~~~~~~~~ 81 (264)
+|+|+++||++.++..|. .++..| +||+|+++|+||++.|.. . .....+++ +++++ .|+.++++
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s-~~e~a~~Dl~a~id 152 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWS-WQELALYDLAEMIH 152 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCc-HHHHHHHHHHHHHH
Confidence 579999999998888873 344456 799999999999886632 1 11112454 88888 79999999
Q ss_pred Hh---CCCeEEEEecChhHHHHHHHHHhCCC---ccceeEEecCCCCCCCCCCCCC-CccHHHHHHHHHHHHh-------
Q 024681 82 TL---GVNRCAYVGHSVSAMIGLLASIRRPD---LFTKLILIGASPRFLNDEDYHG-GFEEAEIDKVFRAMEA------- 147 (264)
Q Consensus 82 ~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------- 147 (264)
++ ..++++++|||+||.+++.++ .+|+ +|+.+++++|............ .........+...+..
T Consensus 153 ~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (395)
T PLN02872 153 YVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRS 231 (395)
T ss_pred HHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCc
Confidence 86 347999999999999998555 5776 6888899888653321111000 0000000000000000
Q ss_pred -hhhhhhhhccc----------ccCCC---CChHHHHHHHHhh-cccCchhhhhhhhhh-----cC--------------
Q 024681 148 -NYEAWAYGYAP----------LAVGA---DVPAAVREFSRTL-FNMRPDISLFVSKTV-----FD-------------- 193 (264)
Q Consensus 148 -~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~-------------- 193 (264)
........+.. ...+. ........+.... ...+......+.+.. ..
T Consensus 232 ~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~ 311 (395)
T PLN02872 232 DVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQ 311 (395)
T ss_pred HHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCC
Confidence 00000000000 00000 0000111111000 000000000000000 00
Q ss_pred -CccccccCCc--ccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCc---ccccChhcHHHHHHHHhc
Q 024681 194 -TDLRGILGLV--RVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHL---PHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 194 -~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~---~~~~~~~~~~~~i~~fl~ 263 (264)
....-.++++ ++|+++++|++|.+++++..+++.+.+++..+++.+++++|. ...+.|+++.+.|.+||+
T Consensus 312 ~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~ 387 (395)
T PLN02872 312 VNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFR 387 (395)
T ss_pred CCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHH
Confidence 0111135566 589999999999999999999999999874588889999995 455889999999999986
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=144.09 Aligned_cols=198 Identities=18% Similarity=0.184 Sum_probs=139.4
Q ss_pred CCcceeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 2 GDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
|+.+..++++......+++++.||...+......+...| -+++++++|++|+|.|...+... ...+|+.+
T Consensus 45 gn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-------n~y~Di~a 117 (258)
T KOG1552|consen 45 GNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-------NLYADIKA 117 (258)
T ss_pred CCEEEEEEEcCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc-------cchhhHHH
Confidence 556667777666665689999999977766555555566 38999999999999997653222 23344444
Q ss_pred HHHHh----C-CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh
Q 024681 79 ILDTL----G-VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA 153 (264)
Q Consensus 79 ~~~~~----~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
+.+.+ | .++++|+|+|+|+..++.+|.+.| +.++||.+|.... +..+......
T Consensus 118 vye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~------------------~rv~~~~~~~-- 175 (258)
T KOG1552|consen 118 VYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSG------------------MRVAFPDTKT-- 175 (258)
T ss_pred HHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhh------------------hhhhccCcce--
Confidence 43333 2 579999999999999999999998 9999999984221 0000000000
Q ss_pred hhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC
Q 024681 154 YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233 (264)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 233 (264)
. .+ +..+...+..+.+++|+|++||++|.+++.....++.+..+++
T Consensus 176 ------------------------------~-~~---~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~ 221 (258)
T KOG1552|consen 176 ------------------------------T-YC---FDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEK 221 (258)
T ss_pred ------------------------------E-Ee---eccccccCcceeccCCEEEEecccCceecccccHHHHHhcccc
Confidence 0 00 0001113456778999999999999999999999999999986
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+-.++.|+||.-..-.| ++.+.+.+|+.
T Consensus 222 ~epl~v~g~gH~~~~~~~-~yi~~l~~f~~ 250 (258)
T KOG1552|consen 222 VEPLWVKGAGHNDIELYP-EYIEHLRRFIS 250 (258)
T ss_pred CCCcEEecCCCcccccCH-HHHHHHHHHHH
Confidence 688899999998765444 46677777764
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-23 Score=139.10 Aligned_cols=143 Identities=22% Similarity=0.379 Sum_probs=114.1
Q ss_pred eEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
+||++||++++...|..+++.| .||.|+.+|+|++|.+... ...+++.+++. .+..+.++++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-------DAVERVLADIR--AGYPDPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-------HHHHHHHHHHH--HHHCTCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-------HHHHHHHHHHH--hhcCCCCcEEEEEEccC
Confidence 6899999999999999999999 9999999999999988321 02444444443 12236689999999999
Q ss_pred HHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhh
Q 024681 97 AMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTL 176 (264)
Q Consensus 97 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (264)
|.+++.++.+. .+++++|++++.+.
T Consensus 72 g~~a~~~~~~~-~~v~~~v~~~~~~~------------------------------------------------------ 96 (145)
T PF12695_consen 72 GAIAANLAARN-PRVKAVVLLSPYPD------------------------------------------------------ 96 (145)
T ss_dssp HHHHHHHHHHS-TTESEEEEESESSG------------------------------------------------------
T ss_pred cHHHHHHhhhc-cceeEEEEecCccc------------------------------------------------------
Confidence 99999999988 68999999997200
Q ss_pred cccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCc
Q 024681 177 FNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHL 245 (264)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 245 (264)
...+...+.|+++++|++|..++.+..+.+.+.++...+++++++++|+
T Consensus 97 --------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 --------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp --------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred --------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0112344669999999999999999999999999855899999999995
|
... |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-21 Score=134.57 Aligned_cols=224 Identities=16% Similarity=0.100 Sum_probs=152.9
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH-HhCCCeEEEEec
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD-TLGVNRCAYVGH 93 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~G~ 93 (264)
.++.++++|-.|+++..|+.+...| ..+.++++++||+|..-.. ...++++++++.+...+. ....+++.++||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~e----p~~~di~~Lad~la~el~~~~~d~P~alfGH 81 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGE----PLLTDIESLADELANELLPPLLDAPFALFGH 81 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCC----cccccHHHHHHHHHHHhccccCCCCeeeccc
Confidence 3468999999999999999999999 8899999999999987432 222369999999988887 454579999999
Q ss_pred ChhHHHHHHHHHhCC---CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHH
Q 024681 94 SVSAMIGLLASIRRP---DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVR 170 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
||||++|..+|.+.. -.+.++.+.+..+................+...+..+......... +++.+.
T Consensus 82 SmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~le----------d~El~~ 151 (244)
T COG3208 82 SMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLE----------DPELMA 151 (244)
T ss_pred chhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhc----------CHHHHH
Confidence 999999999998642 2366677766654422222222333333333333333222111110 011111
Q ss_pred HHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccC
Q 024681 171 EFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSA 250 (264)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 250 (264)
.+.. ...+-+.....+..... ..+++|+.++.|++|..++.+....+.+..++..++.+++ +||+...++
T Consensus 152 l~LP--------ilRAD~~~~e~Y~~~~~-~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~ 221 (244)
T COG3208 152 LFLP--------ILRADFRALESYRYPPP-APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQ 221 (244)
T ss_pred HHHH--------HHHHHHHHhcccccCCC-CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-Ccceehhhh
Confidence 1111 11111111112222222 5679999999999999999999999999988668999999 899999999
Q ss_pred hhcHHHHHHHHhc
Q 024681 251 PAIVGPVIRRALS 263 (264)
Q Consensus 251 ~~~~~~~i~~fl~ 263 (264)
.+++.+.|.+.+.
T Consensus 222 ~~~v~~~i~~~l~ 234 (244)
T COG3208 222 REEVLARLEQHLA 234 (244)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988874
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-21 Score=167.53 Aligned_cols=253 Identities=14% Similarity=0.076 Sum_probs=148.7
Q ss_pred cceeeEEEEeCC------CCceEEEecCCCCChhhHHHh-----hhhc--CCceEEEecCCCCCCCCCCCCCCcccchHH
Q 024681 4 LLEALHVRVVGT------GDRILVLAHGFGTDQSAWQRI-----LPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLD 70 (264)
Q Consensus 4 ~~~~~~~~~~g~------~~p~vv~~hG~~~~~~~~~~~-----~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 70 (264)
.+.-++|....+ .+|+||++||++.+...|+.. .+.| +||+|+++|+ |.++..... ..+ ++.
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~-~~~-~l~ 122 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGG-MER-NLA 122 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcC-ccC-CHH
Confidence 345566754432 447999999999999999865 6777 7999999994 665542111 112 466
Q ss_pred HHHHHHHHHHHH---hCCCeEEEEecChhHHHHHHHHHhC-CCccceeEEecCCCCCCCCCCC--CC-------CccH--
Q 024681 71 AYVDDLLNILDT---LGVNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFLNDEDY--HG-------GFEE-- 135 (264)
Q Consensus 71 ~~~~~~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~--~~-------~~~~-- 135 (264)
+++..+.+.++. +..++++++||||||.+++.+++.+ +++|+++|+++++..+...... .. .+..
T Consensus 123 ~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 202 (994)
T PRK07868 123 DHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADH 202 (994)
T ss_pred HHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhh
Confidence 776666666654 3447899999999999999988755 5689999998887544221100 00 0000
Q ss_pred --------HHHH-HHHHHHH-----hhhhhhhhhcccccCCCCChHHHHHHHHhh--cccCchhhhhhhhhhcC------
Q 024681 136 --------AEID-KVFRAME-----ANYEAWAYGYAPLAVGADVPAAVREFSRTL--FNMRPDISLFVSKTVFD------ 193 (264)
Q Consensus 136 --------~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------ 193 (264)
.... ..+..+. .....+...+...... ...+..+.+.... ..........+...+..
T Consensus 203 ~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~-~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~ 281 (994)
T PRK07868 203 VFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREAL-LPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMT 281 (994)
T ss_pred hhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhh-ccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccC
Confidence 0000 0000000 0000011111100000 0001111211111 01111122222222211
Q ss_pred -----CccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE-EEecCCCCcccc---cChhcHHHHHHHHhc
Q 024681 194 -----TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV-ELLKIEGHLPHL---SAPAIVGPVIRRALS 263 (264)
Q Consensus 194 -----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~ 263 (264)
......++++++|+|+|+|++|.++|++..+.+.+.+++ .++ .+++++||+.++ ..++++...|.+||+
T Consensus 282 g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~-a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~ 359 (994)
T PRK07868 282 GGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPN-AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVK 359 (994)
T ss_pred ceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHH
Confidence 011135789999999999999999999999999999998 776 678899997655 346888899999986
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.8e-21 Score=140.14 Aligned_cols=258 Identities=21% Similarity=0.338 Sum_probs=173.3
Q ss_pred eeEEEEeCC----CCceEEEecCCCCChh-----------hHHHhhh---hc--CCceEEEecCCCCC-CC-CCCCCCCc
Q 024681 7 ALHVRVVGT----GDRILVLAHGFGTDQS-----------AWQRILP---YL--NHHRVIMFDLVCAG-SV-NPDYFDFR 64 (264)
Q Consensus 7 ~~~~~~~g~----~~p~vv~~hG~~~~~~-----------~~~~~~~---~l--~g~~v~~~d~~g~G-~s-~~~~~~~~ 64 (264)
.+.|+.+|. ....|+++|++.++.. .|..++. .+ ..|-||+.|..|.+ .| .+....+.
T Consensus 37 ~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~ 116 (368)
T COG2021 37 RVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG 116 (368)
T ss_pred EEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC
Confidence 578888886 2358999999988543 3454442 34 78999999999875 33 33322222
Q ss_pred --------ccchHHHHHHHHHHHHHHhCCCeEE-EEecChhHHHHHHHHHhCCCccceeEEecCCCCCC-----------
Q 024681 65 --------RYTTLDAYVDDLLNILDTLGVNRCA-YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL----------- 124 (264)
Q Consensus 65 --------~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~----------- 124 (264)
.-.++.|++..-..+++++|++++. +||.||||+.|+.++..+|++|.++|.+++++...
T Consensus 117 g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r 196 (368)
T COG2021 117 GKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQR 196 (368)
T ss_pred CCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHH
Confidence 2125889999889999999999987 89999999999999999999999999999865421
Q ss_pred ----CCCCCCCC-----ccHH-HH--HHHHHHHH-hhhhhhhhhcccccCCC-----CChHHHHHHH-----HhhcccCc
Q 024681 125 ----NDEDYHGG-----FEEA-EI--DKVFRAME-ANYEAWAYGYAPLAVGA-----DVPAAVREFS-----RTLFNMRP 181 (264)
Q Consensus 125 ----~~~~~~~~-----~~~~-~~--~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-----~~~~~~~~ 181 (264)
.++.+..+ .... .+ .+++..+. .....+...+....... .....++.+. +.....++
T Consensus 197 ~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDa 276 (368)
T COG2021 197 QAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDA 276 (368)
T ss_pred HHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCc
Confidence 12222111 1111 11 11111111 22233444443322111 1111333333 33445667
Q ss_pred hhhhhhhhhhcCCccc-------cccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec-CCCCcccccChhc
Q 024681 182 DISLFVSKTVFDTDLR-------GILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK-IEGHLPHLSAPAI 253 (264)
Q Consensus 182 ~~~~~~~~~~~~~~~~-------~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~ 253 (264)
..+....+.+...|.. ..++++++|++++.-+.|...|++..+.+.+.++....+++++ ..||..++...+.
T Consensus 277 NsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~ 356 (368)
T COG2021 277 NSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEA 356 (368)
T ss_pred chHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhh
Confidence 7766666666554443 4488999999999999999999999999999999843265554 5899988888888
Q ss_pred HHHHHHHHhcC
Q 024681 254 VGPVIRRALSR 264 (264)
Q Consensus 254 ~~~~i~~fl~~ 264 (264)
+...|.+||+.
T Consensus 357 ~~~~i~~fL~~ 367 (368)
T COG2021 357 VGPLIRKFLAL 367 (368)
T ss_pred hhHHHHHHhhc
Confidence 99999999863
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7e-22 Score=138.02 Aligned_cols=101 Identities=22% Similarity=0.324 Sum_probs=84.8
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCA 89 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 89 (264)
..|.+++.||.|.+.-.|..++..| -..+|+++|+||||++...+ ..+. +.+.+++|+.++++++ ...+++
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~--e~dl-S~eT~~KD~~~~i~~~fge~~~~ii 149 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVEN--EDDL-SLETMSKDFGAVIKELFGELPPQII 149 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCC--hhhc-CHHHHHHHHHHHHHHHhccCCCceE
Confidence 4589999999999999999999999 57788999999999996542 2334 5999999999999988 245899
Q ss_pred EEecChhHHHHHHHHHh--CCCccceeEEecCC
Q 024681 90 YVGHSVSAMIGLLASIR--RPDLFTKLILIGAS 120 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~ 120 (264)
||||||||.+|.+.|.. -|. +.+++.++..
T Consensus 150 lVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 150 LVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred EEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 99999999999887764 454 8899999864
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.3e-22 Score=140.95 Aligned_cols=253 Identities=15% Similarity=0.180 Sum_probs=150.4
Q ss_pred eeeEEEEeCC-C--CceEEEecCCCCChhh-HHHhh-----hhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 6 EALHVRVVGT-G--DRILVLAHGFGTDQSA-WQRIL-----PYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 6 ~~~~~~~~g~-~--~p~vv~~hG~~~~~~~-~~~~~-----~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
+.+++...|+ . +|++|-.|..|.+... |..+. +.+ +.|.++=+|.||+..-.+.-.....|-++++++++
T Consensus 9 G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~ 88 (283)
T PF03096_consen 9 GSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEM 88 (283)
T ss_dssp EEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCT
T ss_pred eEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHH
Confidence 5677888886 3 7999999999988765 76654 355 99999999999998765543333457789999999
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHH--HHhhhh-hh
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRA--MEANYE-AW 152 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~ 152 (264)
+.+++++++++.++-+|-..||.+..++|..+|++|.++||+++.+.... |............+.. +..... ..
T Consensus 89 l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g---w~Ew~~~K~~~~~L~~~gmt~~~~d~L 165 (283)
T PF03096_consen 89 LPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG---WMEWFYQKLSSWLLYSYGMTSSVKDYL 165 (283)
T ss_dssp HHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S------HHHHHHHHHH-------CTTS-HHHHH
T ss_pred HHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc---HHHHHHHHHhcccccccccccchHHhh
Confidence 99999999999999999999999999999999999999999998654211 1000000000000000 000000 00
Q ss_pred hhhcccccCCCCChHHHHHHHHhhcc-cCchhhhhhhhhhc-CCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 153 AYGYAPLAVGADVPAAVREFSRTLFN-MRPDISLFVSKTVF-DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
..............+.++.+.+.+.. .++.....++..+. +.|.....+...+|+|++.|+..+.. +.+..+..++
T Consensus 166 l~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~L 243 (283)
T PF03096_consen 166 LWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKL 243 (283)
T ss_dssp HHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS
T ss_pred hhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhc
Confidence 11111111111133466666666654 45566666665553 55666666777899999999998876 4556676666
Q ss_pred CC-CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 231 GG-RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 231 ~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.. ..++..++++|=.+..|+|+.+++.+.-||+
T Consensus 244 dp~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 244 DPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp -CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred CcccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 43 3789999999999999999999999999985
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7e-21 Score=137.12 Aligned_cols=176 Identities=18% Similarity=0.228 Sum_probs=118.2
Q ss_pred CCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCC----CCC------CcccchHHHHHHHHHHHHH-
Q 024681 15 TGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPD----YFD------FRRYTTLDAYVDDLLNILD- 81 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~----~~~------~~~~~~~~~~~~~~~~~~~- 81 (264)
+..|+||++||++++...|..+.+.| .++.+..++.+|...+... .++ .....++.+..+.+.+.++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999 4555555555554322110 000 0001112233333333333
Q ss_pred ---HhCC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 82 ---TLGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 82 ---~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
..+. ++++++|+|+||.+++.++.++|+.+.+++.+++.... .
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~----------------------------~---- 141 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS----------------------------L---- 141 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc----------------------------c----
Confidence 3333 58999999999999999999999888878777642100 0
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR--- 233 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--- 233 (264)
. .......|+++++|++|.++|.+.++.+.+.+...
T Consensus 142 ---------~--------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~ 180 (232)
T PRK11460 142 ---------P--------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGD 180 (232)
T ss_pred ---------c--------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCC
Confidence 0 00012679999999999999999998888877532
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++..++++||.+..+..+.+.+.+.++|.
T Consensus 181 ~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 181 VTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred eEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 678889999999876666666677666653
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-19 Score=128.35 Aligned_cols=231 Identities=15% Similarity=0.172 Sum_probs=145.9
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC-eEEEEecC
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN-RCAYVGHS 94 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 94 (264)
.+||-+||.+++..+|+.+.+.| .|++++.+++||+|.+... +...|+ -.+...-+.++++.++++ +++.+|||
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~--~~~~~~-n~er~~~~~~ll~~l~i~~~~i~~gHS 112 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGY--PDQQYT-NEERQNFVNALLDELGIKGKLIFLGHS 112 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCC--cccccC-hHHHHHHHHHHHHHcCCCCceEEEEec
Confidence 38999999999999999999999 9999999999999999764 234565 788899999999999885 78899999
Q ss_pred hhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC--ChHHHHHH
Q 024681 95 VSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD--VPAAVREF 172 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 172 (264)
.|+-.|+.+|..+| ..++++++|+..-... ..........+..+...+........-.......+-. ..+.....
T Consensus 113 rGcenal~la~~~~--~~g~~lin~~G~r~Hk-gIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na 189 (297)
T PF06342_consen 113 RGCENALQLAVTHP--LHGLVLINPPGLRPHK-GIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAINA 189 (297)
T ss_pred cchHHHHHHHhcCc--cceEEEecCCcccccc-CcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHHH
Confidence 99999999999996 6799999986432221 1111111112222222111111000000000000000 00111111
Q ss_pred HHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC--------------------
Q 024681 173 SRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG-------------------- 232 (264)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-------------------- 232 (264)
.+.+..++.... ....+.+.+-++|+++++|.+|..+..+...+++..+.+
T Consensus 190 ~r~m~~~df~~q---------~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~ 260 (297)
T PF06342_consen 190 MRSMQNCDFEEQ---------KEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILK 260 (297)
T ss_pred HHHHHhcCHHHH---------HHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHH
Confidence 111111111111 112233445568999999999999876665555443321
Q ss_pred ------CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 233 ------RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 233 ------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
....+.+.+.||+.+-.+++-+++.+...|+
T Consensus 261 ~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 261 SFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred HHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 1234567779999999999999998887663
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-19 Score=127.68 Aligned_cols=253 Identities=17% Similarity=0.180 Sum_probs=170.2
Q ss_pred eeeEEEEeCC---CCceEEEecCCCCChhh-HHHhhh-----hc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 6 EALHVRVVGT---GDRILVLAHGFGTDQSA-WQRILP-----YL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 6 ~~~~~~~~g~---~~p~vv~~hG~~~~~~~-~~~~~~-----~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
+.+++...|+ ++|++|-.|..+.+... |..+.. .+ ..|.|+-+|.||+-.-.+.-.....|-++++++++
T Consensus 32 G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~ 111 (326)
T KOG2931|consen 32 GVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADM 111 (326)
T ss_pred ccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHHH
Confidence 3466777775 36899999999988765 766543 45 67999999999997665433233356689999999
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHH--HHhhh-hhh
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRA--MEANY-EAW 152 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~ 152 (264)
+..++++++.+.++-+|--.|+.+..++|..+|++|.++||+++.+.... |..+........++.. +.... .-.
T Consensus 112 l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g---wiew~~~K~~s~~l~~~Gmt~~~~d~l 188 (326)
T KOG2931|consen 112 LPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG---WIEWAYNKVSSNLLYYYGMTQGVKDYL 188 (326)
T ss_pred HHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch---HHHHHHHHHHHHHHHhhchhhhHHHHH
Confidence 99999999999999999999999999999999999999999998654221 1111111111111111 11111 111
Q ss_pred hhhcccccCCCCChHHHHHHHHhhccc-Cchhhhhhhhhhc-CCccccccC----CcccCEEEEecCCCCCcchhhHHHH
Q 024681 153 AYGYAPLAVGADVPAAVREFSRTLFNM-RPDISLFVSKTVF-DTDLRGILG----LVRVPCVIIQTSKDVSVPVSVAEYL 226 (264)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~----~i~~P~l~i~g~~D~~~~~~~~~~~ 226 (264)
+.............+.++++.+.+... ++.....++..+. +.|...... .++||+|++.|++.+.+ +....+
T Consensus 189 l~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~ 266 (326)
T KOG2931|consen 189 LAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVEC 266 (326)
T ss_pred HHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchh--hhhhhh
Confidence 122222222222455666766666543 3455555555443 233332222 45699999999998876 344555
Q ss_pred HHHcCC-CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 227 QRHLGG-RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 227 ~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
..++.. ...+..+.++|-.+..++|..+++.+.-|++
T Consensus 267 n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 267 NSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred hcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 555543 2778888999999999999999999999885
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=136.76 Aligned_cols=100 Identities=15% Similarity=0.183 Sum_probs=82.2
Q ss_pred CceEEEecCCCCC----hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hCCCe
Q 024681 17 DRILVLAHGFGTD----QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LGVNR 87 (264)
Q Consensus 17 ~p~vv~~hG~~~~----~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 87 (264)
+|+||++||++.. ...|..+++.| .||+|+++|+||||.|.... ..+ +++.+.+|+..+++. .+.++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~---~~~-~~~~~~~Dv~~ai~~L~~~~~~~ 100 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF---AAA-RWDVWKEDVAAAYRWLIEQGHPP 100 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc---ccC-CHHHHHHHHHHHHHHHHhcCCCC
Confidence 4789999999864 34567778888 89999999999999996532 223 377788887765544 46689
Q ss_pred EEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
++++||||||.+++.+|.++|++++++|+++|.
T Consensus 101 v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 101 VTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred EEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 999999999999999999999999999999985
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.9e-20 Score=122.50 Aligned_cols=200 Identities=19% Similarity=0.248 Sum_probs=128.6
Q ss_pred ceEEEecCCCCChh--hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-Ce--EEE
Q 024681 18 RILVLAHGFGTDQS--AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NR--CAY 90 (264)
Q Consensus 18 p~vv~~hG~~~~~~--~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~l 90 (264)
..+|++||+-++.. ....++.+| .|+.++.+|++|.|+|... ..+..| ...++|+..+++++.. .+ -++
T Consensus 34 e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gs-f~~Gn~---~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 34 EIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGS-FYYGNY---NTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred eEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCc-cccCcc---cchHHHHHHHHHHhccCceEEEEE
Confidence 48999999998763 456678888 8999999999999999764 233444 4456999999999843 33 368
Q ss_pred EecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHH-HHHHhhhhhhhhhcccccCCCCChHHH
Q 024681 91 VGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVF-RAMEANYEAWAYGYAPLAVGADVPAAV 169 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
+|||-||-+++.+|.++++ +.-+|-+++-... . ... ..+......|...-.-....+....
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl--~-------------~~I~eRlg~~~l~~ike~Gfid~~~rkG~-- 171 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL--K-------------NGINERLGEDYLERIKEQGFIDVGPRKGK-- 171 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccch--h-------------cchhhhhcccHHHHHHhCCceecCcccCC--
Confidence 9999999999999999987 7777766653211 0 001 1111222222111000000000000
Q ss_pred HHHHHhhcccCchhhhhhhhhhcCCccccccCCc--ccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccc
Q 024681 170 REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLV--RVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPH 247 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 247 (264)
................+..+...+| +||||-+||..|.++|.+.+.++++.+++ .++.++||+.|...
T Consensus 172 ---------y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iIEgADHnyt 241 (269)
T KOG4667|consen 172 ---------YGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEIIEGADHNYT 241 (269)
T ss_pred ---------cCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC-CceEEecCCCcCcc
Confidence 0000000001111122333333334 69999999999999999999999999999 89999999999765
Q ss_pred cc
Q 024681 248 LS 249 (264)
Q Consensus 248 ~~ 249 (264)
..
T Consensus 242 ~~ 243 (269)
T KOG4667|consen 242 GH 243 (269)
T ss_pred ch
Confidence 43
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.8e-21 Score=127.72 Aligned_cols=196 Identities=14% Similarity=0.074 Sum_probs=134.4
Q ss_pred CCCceEEEecCCCCChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh------CC
Q 024681 15 TGDRILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL------GV 85 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 85 (264)
+..|+++++|+..++....-..+..+ -+.+|+.+++||+|.|...+.. +.+.-|-.++++++ +.
T Consensus 76 ~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE-------~GL~lDs~avldyl~t~~~~dk 148 (300)
T KOG4391|consen 76 SSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE-------EGLKLDSEAVLDYLMTRPDLDK 148 (300)
T ss_pred CCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc-------cceeccHHHHHHHHhcCccCCc
Confidence 36689999999999988877777766 6889999999999999765322 22333444455544 34
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
.++++.|.|.||.+|+.+|+++.+++.++|+-+.....+.... .-+..........+
T Consensus 149 tkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i----------~~v~p~~~k~i~~l------------- 205 (300)
T KOG4391|consen 149 TKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAI----------PLVFPFPMKYIPLL------------- 205 (300)
T ss_pred ceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhh----------heeccchhhHHHHH-------------
Confidence 6899999999999999999999999999999987533211000 00000000000000
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCCC
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGH 244 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH 244 (264)
..+.. ......+...+.|.|++.|..|.++|+...+.+++..+.. +++..+|++.|
T Consensus 206 ------c~kn~-----------------~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtH 262 (300)
T KOG4391|consen 206 ------CYKNK-----------------WLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTH 262 (300)
T ss_pred ------HHHhh-----------------hcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCcc
Confidence 00000 0001223455889999999999999999999999999875 78999999999
Q ss_pred cccccChhcHHHHHHHHhcC
Q 024681 245 LPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 245 ~~~~~~~~~~~~~i~~fl~~ 264 (264)
.-.+- -+-..+.|.+||.+
T Consensus 263 NDT~i-~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 263 NDTWI-CDGYFQAIEDFLAE 281 (300)
T ss_pred CceEE-eccHHHHHHHHHHH
Confidence 54332 24567888888753
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.2e-20 Score=150.19 Aligned_cols=220 Identities=17% Similarity=0.161 Sum_probs=136.1
Q ss_pred CCcceeeEEEEeCCCC----ceEEEecCCCCChhh--HHHhhhhc--CCceEEEecCCCCCCC-----CCCCCCCcccch
Q 024681 2 GDLLEALHVRVVGTGD----RILVLAHGFGTDQSA--WQRILPYL--NHHRVIMFDLVCAGSV-----NPDYFDFRRYTT 68 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~----p~vv~~hG~~~~~~~--~~~~~~~l--~g~~v~~~d~~g~G~s-----~~~~~~~~~~~~ 68 (264)
|..+..+.+...+.++ |+||++||.+..... |....+.| +||.|+.+|.||.+.- .....+... ..
T Consensus 375 G~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~-~~ 453 (620)
T COG1506 375 GETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGG-VD 453 (620)
T ss_pred CCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCC-cc
Confidence 4555666666655432 899999998765544 55666666 9999999999976442 111111111 23
Q ss_pred HHHHHHHHHHHHHHhC---CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHH
Q 024681 69 LDAYVDDLLNILDTLG---VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAM 145 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (264)
.+++.+.+. ++...+ .+++.++|||+||.+++..+.+.| .+++.+...+........
T Consensus 454 ~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~------------------ 513 (620)
T COG1506 454 LEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYF------------------ 513 (620)
T ss_pred HHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhc------------------
Confidence 666666666 444443 248999999999999999999888 677777776643211000
Q ss_pred HhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHH
Q 024681 146 EANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEY 225 (264)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 225 (264)
......+.... ... ...... -...+...+......++++|+|+|||++|..+|.+.+.+
T Consensus 514 ~~~~~~~~~~~----------------~~~-~~~~~~----~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~ 572 (620)
T COG1506 514 GESTEGLRFDP----------------EEN-GGGPPE----DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQ 572 (620)
T ss_pred cccchhhcCCH----------------HHh-CCCccc----ChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHH
Confidence 00000000000 000 000000 000011112223467889999999999999999999999
Q ss_pred HHHHcCCC---ceEEEecCCCCcccc-cChhcHHHHHHHHhc
Q 024681 226 LQRHLGGR---NTVELLKIEGHLPHL-SAPAIVGPVIRRALS 263 (264)
Q Consensus 226 ~~~~~~~~---~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 263 (264)
+.+.+... ++++++|+.+|.+.. ++...+.+.+.+|++
T Consensus 573 ~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~ 614 (620)
T COG1506 573 LVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFK 614 (620)
T ss_pred HHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHH
Confidence 98887542 899999999997665 445566677777764
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.6e-19 Score=137.22 Aligned_cols=236 Identities=16% Similarity=0.179 Sum_probs=143.5
Q ss_pred CcceeeEEEEeCC--CCceEEEecCCCCChhhH-----HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHH
Q 024681 3 DLLEALHVRVVGT--GDRILVLAHGFGTDQSAW-----QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYV 73 (264)
Q Consensus 3 ~~~~~~~~~~~g~--~~p~vv~~hG~~~~~~~~-----~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 73 (264)
+.++-++|....+ -++|||+++.+-.....+ +.+++.| +||+|+.+|+++-+.+.. .. ++++++
T Consensus 199 ~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r------~~-~ldDYv 271 (560)
T TIGR01839 199 EVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR------EW-GLSTYV 271 (560)
T ss_pred CceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc------CC-CHHHHH
Confidence 3456777765443 346999999988666655 4678888 999999999998665532 12 477777
Q ss_pred HHHHHHHHHh----CCCeEEEEecChhHHHHHH----HHHhCCC-ccceeEEecCCCCCCCCCCCCCCccHHHHH-----
Q 024681 74 DDLLNILDTL----GVNRCAYVGHSVSAMIGLL----ASIRRPD-LFTKLILIGASPRFLNDEDYHGGFEEAEID----- 139 (264)
Q Consensus 74 ~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~----~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~----- 139 (264)
+.+.+.++.+ +.+++.++|+|+||.++.. +++++++ +|++++++.+...+..............+.
T Consensus 272 ~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~ 351 (560)
T TIGR01839 272 DALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRR 351 (560)
T ss_pred HHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHH
Confidence 7666666655 6789999999999999986 7888886 799999999877664332222111111111
Q ss_pred -------------HHHHHHHhhhhhhhhhcccccCCCCChH-HHHHHHHhhcccCchhhhhhhhhhcCCc----------
Q 024681 140 -------------KVFRAMEANYEAWAYGYAPLAVGADVPA-AVREFSRTLFNMRPDISLFVSKTVFDTD---------- 195 (264)
Q Consensus 140 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 195 (264)
..+..+...-.-|............... .+..+..............+...+....
T Consensus 352 ~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~ 431 (560)
T TIGR01839 352 SYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVC 431 (560)
T ss_pred HHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEEC
Confidence 1111111110011111111111111110 1222222223333333333332111111
Q ss_pred -cccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcc
Q 024681 196 -LRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLP 246 (264)
Q Consensus 196 -~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 246 (264)
..-.+++|++|++++.|+.|.++|++.+..+.+.+...++++..+ +||..
T Consensus 432 G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHIg 482 (560)
T TIGR01839 432 GTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHIQ 482 (560)
T ss_pred CEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCccc
Confidence 123578899999999999999999999999999998756666665 89953
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-18 Score=128.01 Aligned_cols=187 Identities=16% Similarity=0.170 Sum_probs=112.5
Q ss_pred CCceEEEecCCCCChhhHHHh---hhhc--CCceEEEecCCCCCCC-----CC------C-----CC-------CCcccc
Q 024681 16 GDRILVLAHGFGTDQSAWQRI---LPYL--NHHRVIMFDLVCAGSV-----NP------D-----YF-------DFRRYT 67 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~---~~~l--~g~~v~~~d~~g~G~s-----~~------~-----~~-------~~~~~~ 67 (264)
+.|+|+++||++++...|... ...+ .|+.|+++|..++|.. .. . .. ....|.
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 458999999999988777543 3445 6999999998776621 00 0 00 000111
Q ss_pred hHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh
Q 024681 68 TLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA 147 (264)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
.+++...+....+.++.++++++||||||..|+.++.++|+++++++.+++........ .....+
T Consensus 126 -~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~--------- 190 (283)
T PLN02442 126 -VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCP-----WGQKAF--------- 190 (283)
T ss_pred -HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCc-----hhhHHH---------
Confidence 33344444455555677899999999999999999999999999999998853311000 000000
Q ss_pred hhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh-hHHHH
Q 024681 148 NYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYL 226 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~ 226 (264)
..+ +... ... +.+ .........+...++|+++++|++|.+++.. .++.+
T Consensus 191 --~~~--------~g~~-~~~---~~~----------------~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~ 240 (283)
T PLN02442 191 --TNY--------LGSD-KAD---WEE----------------YDATELVSKFNDVSATILIDQGEADKFLKEQLLPENF 240 (283)
T ss_pred --HHH--------cCCC-hhh---HHH----------------cChhhhhhhccccCCCEEEEECCCCccccccccHHHH
Confidence 000 0000 000 000 0011111223456789999999999998853 23444
Q ss_pred HHHc---CCCceEEEecCCCCccc
Q 024681 227 QRHL---GGRNTVELLKIEGHLPH 247 (264)
Q Consensus 227 ~~~~---~~~~~~~~~~~~gH~~~ 247 (264)
.+.+ ...+++.++++.+|..+
T Consensus 241 ~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 241 EEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHHHHHcCCCeEEEEeCCCCccHH
Confidence 4333 22278999999999655
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.1e-20 Score=131.82 Aligned_cols=191 Identities=19% Similarity=0.156 Sum_probs=110.5
Q ss_pred HHHhhhhc--CCceEEEecCCCCCCCCCC----CCCCcccchHHHHHHHHHHHHHHh--CCCeEEEEecChhHHHHHHHH
Q 024681 33 WQRILPYL--NHHRVIMFDLVCAGSVNPD----YFDFRRYTTLDAYVDDLLNILDTL--GVNRCAYVGHSVSAMIGLLAS 104 (264)
Q Consensus 33 ~~~~~~~l--~g~~v~~~d~~g~G~s~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a 104 (264)
|......| +||.|+.+|+||.+..... .........++|..+.+..+++.- +.+++.++|+|+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44455666 8999999999998754211 000011112334444444443332 346899999999999999999
Q ss_pred HhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhh
Q 024681 105 IRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDIS 184 (264)
Q Consensus 105 ~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (264)
.++|++++++|..++............. +... .... ... ............
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~-----~~~~---------~~~~-~~~---~~~~~~~~~~~s----------- 133 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI-----YTKA---------EYLE-YGD---PWDNPEFYRELS----------- 133 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC-----HHHG---------HHHH-HSS---TTTSHHHHHHHH-----------
T ss_pred cccceeeeeeeccceecchhcccccccc-----cccc---------cccc-cCc---cchhhhhhhhhc-----------
Confidence 9999999999999986443221110000 0000 0000 000 000000000000
Q ss_pred hhhhhhhcCCccccccCC--cccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecCCCCccc-ccChhcHHHHH
Q 024681 185 LFVSKTVFDTDLRGILGL--VRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKIEGHLPH-LSAPAIVGPVI 258 (264)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~--i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~-~~~~~~~~~~i 258 (264)
....+.+ +++|+|+++|++|..+|.+.+..+.+.+... +++.++|++||.+. .+...+..+.+
T Consensus 134 -----------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~ 202 (213)
T PF00326_consen 134 -----------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERI 202 (213)
T ss_dssp -----------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHH
T ss_pred -----------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHH
Confidence 0011222 6899999999999999999988888776432 89999999999544 34445777777
Q ss_pred HHHhc
Q 024681 259 RRALS 263 (264)
Q Consensus 259 ~~fl~ 263 (264)
.+||+
T Consensus 203 ~~f~~ 207 (213)
T PF00326_consen 203 LDFFD 207 (213)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 78775
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-18 Score=126.73 Aligned_cols=106 Identities=16% Similarity=0.182 Sum_probs=76.9
Q ss_pred CCceEEEecCCCCChhhHHHh--hhhc---CCceEEEecC--CCCCCCCCC----------------C-CCCcccchHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRI--LPYL---NHHRVIMFDL--VCAGSVNPD----------------Y-FDFRRYTTLDA 71 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~--~~~l---~g~~v~~~d~--~g~G~s~~~----------------~-~~~~~~~~~~~ 71 (264)
..|+|+++||++++...|... ...+ .|+.|+++|. +|+|.+... . .....+.....
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 358999999999988877543 2344 5899999998 555533210 0 00012332334
Q ss_pred HHHHHHHHHHH---hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 72 YVDDLLNILDT---LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 72 ~~~~~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+++++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++..
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 46788887776 355789999999999999999999999999999998864
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.2e-19 Score=127.54 Aligned_cols=237 Identities=18% Similarity=0.172 Sum_probs=130.6
Q ss_pred CCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCe
Q 024681 16 GDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNR 87 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 87 (264)
..|.||++||+.++. ..-+.+++.+ +||.|++++.|||+.+... .+.-|++- ..+|+..+++.+ ...+
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~--~p~~yh~G--~t~D~~~~l~~l~~~~~~r~ 149 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANT--SPRLYHSG--ETEDIRFFLDWLKARFPPRP 149 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCccc--Ccceeccc--chhHHHHHHHHHHHhCCCCc
Confidence 458999999976654 3345677788 9999999999999988542 23344322 225666555554 4579
Q ss_pred EEEEecChhH-HHHHHHHHhCCC-ccceeEEecCCCCCC-----CCCCCC-CCccHHHHHHHHHHHHhhhhhhhhhcccc
Q 024681 88 CAYVGHSVSA-MIGLLASIRRPD-LFTKLILIGASPRFL-----NDEDYH-GGFEEAEIDKVFRAMEANYEAWAYGYAPL 159 (264)
Q Consensus 88 ~~l~G~S~Gg-~~a~~~a~~~p~-~v~~~vl~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
+..+|.|+|| +++..++.+-.+ .+.+.+.++.+.... ....+. ..+.......+...+....... ..
T Consensus 150 ~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l-----~~ 224 (345)
T COG0429 150 LYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKEL-----EP 224 (345)
T ss_pred eEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhc-----Cc
Confidence 9999999999 555555544222 344554444432210 011111 1111111111111222211111 00
Q ss_pred cCCCCChHHHHHHHHhhcccCc------hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHH-HcCC
Q 024681 160 AVGADVPAAVREFSRTLFNMRP------DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR-HLGG 232 (264)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~-~~~~ 232 (264)
.......+..+ -.+.+...+. .............+....+++|.+|+|+|++.+|++++++....... ..|+
T Consensus 225 ~~p~~~~~~ik-~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~ 303 (345)
T COG0429 225 SLPGTVLAAIK-RCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPN 303 (345)
T ss_pred ccCcHHHHHHH-hhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCc
Confidence 00000001111 0111111111 11222223333455567889999999999999999999887777666 5555
Q ss_pred CceEEEecCCCCccccc----Chh-cHHHHHHHHhc
Q 024681 233 RNTVELLKIEGHLPHLS----APA-IVGPVIRRALS 263 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~ 263 (264)
+.+..-+.+||..++. +|. -..+.+.+||+
T Consensus 304 -v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~ 338 (345)
T COG0429 304 -VLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLD 338 (345)
T ss_pred -eEEEeecCCceEEeccCccccchhhHHHHHHHHHH
Confidence 8888899999987776 332 33455555553
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=129.50 Aligned_cols=172 Identities=16% Similarity=0.155 Sum_probs=112.5
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-------hCCC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT-------LGVN 86 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 86 (264)
..|+||++||++.+...|..+++.| .||.|+++|++|++.+.. .....+..+..+.+.+.++. .+.+
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~----~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~ 126 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG----TDEIKDAAAVINWLSSGLAAVLPEGVRPDLS 126 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc----hhhHHHHHHHHHHHHhhhhhhcccccccChh
Confidence 4489999999999999999999999 799999999998754321 11111223333333332222 2346
Q ss_pred eEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
+++++|||+||.+++.+|.++++ +++++|+++|.........
T Consensus 127 ~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~--------------------------------- 173 (313)
T PLN00021 127 KLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ--------------------------------- 173 (313)
T ss_pred heEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC---------------------------------
Confidence 89999999999999999998874 5789999988532110000
Q ss_pred CCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCC---------Ccchhh-HHHHHHHcC
Q 024681 162 GADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDV---------SVPVSV-AEYLQRHLG 231 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~---------~~~~~~-~~~~~~~~~ 231 (264)
..+... .......++.+|++++.+..|. ..|... ...+.+..+
T Consensus 174 -----------------~~p~il----------~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~ 226 (313)
T PLN00021 174 -----------------TPPPVL----------TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECK 226 (313)
T ss_pred -----------------CCCccc----------ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcC
Confidence 000000 0001122368999999998763 233333 367777776
Q ss_pred CCceEEEecCCCCcccccCh
Q 024681 232 GRNTVELLKIEGHLPHLSAP 251 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~ 251 (264)
..+.+.+++++||+-++|..
T Consensus 227 ~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 227 APAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred CCeeeeeecCCCcceeecCC
Confidence 55888899999998776544
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.9e-18 Score=119.95 Aligned_cols=179 Identities=20% Similarity=0.227 Sum_probs=107.5
Q ss_pred eCCCCceEEEecCCCCChhhHHHhhh-hc--CCceEEEecCCC------CCC---CCC--CCCCC---cccchHHHHHHH
Q 024681 13 VGTGDRILVLAHGFGTDQSAWQRILP-YL--NHHRVIMFDLVC------AGS---VNP--DYFDF---RRYTTLDAYVDD 75 (264)
Q Consensus 13 ~g~~~p~vv~~hG~~~~~~~~~~~~~-~l--~g~~v~~~d~~g------~G~---s~~--~~~~~---~~~~~~~~~~~~ 75 (264)
.++..|+||++||+|.+...+..+.. .+ .+..++.++-|. .|. +-- ...+. .....+...++.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 44567899999999999988877666 23 677777776542 232 110 00011 112234555555
Q ss_pred HHHHHHHh-----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhh
Q 024681 76 LLNILDTL-----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYE 150 (264)
Q Consensus 76 ~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
+.++++.. ..++++++|+|+||.+|+.++.++|+.+.++|.+++.......
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~------------------------ 145 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE------------------------ 145 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC------------------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc------------------------
Confidence 55665543 3358999999999999999999999999999999974221000
Q ss_pred hhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 151 AWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
+ .+...... ++|++++||.+|+++|.+..+...+.+
T Consensus 146 -~-----------------------------------------~~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L 181 (216)
T PF02230_consen 146 -L-----------------------------------------EDRPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFL 181 (216)
T ss_dssp -C-----------------------------------------HCCHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHH
T ss_pred -c-----------------------------------------cccccccC--CCcEEEEecCCCCcccHHHHHHHHHHH
Confidence 0 00000111 679999999999999998888877776
Q ss_pred CCC---ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 231 GGR---NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 231 ~~~---~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+. +++..+++.||.+..+ ..+.+.+||+
T Consensus 182 ~~~~~~v~~~~~~g~gH~i~~~----~~~~~~~~l~ 213 (216)
T PF02230_consen 182 KAAGANVEFHEYPGGGHEISPE----ELRDLREFLE 213 (216)
T ss_dssp HCTT-GEEEEEETT-SSS--HH----HHHHHHHHHH
T ss_pred HhcCCCEEEEEcCCCCCCCCHH----HHHHHHHHHh
Confidence 443 7899999999987633 3444555554
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.2e-18 Score=128.26 Aligned_cols=194 Identities=12% Similarity=0.144 Sum_probs=105.1
Q ss_pred CceEEEecCCCCChhhHH-Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hCCCeEEE
Q 024681 17 DRILVLAHGFGTDQSAWQ-RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LGVNRCAY 90 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~-~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 90 (264)
.|+||++.|+-+-...+. .+.+.| +|+.++++|.||.|.|.....+.+ + +..-..+...+.. ++.++|.+
T Consensus 190 ~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D-~---~~l~~aVLd~L~~~p~VD~~RV~~ 265 (411)
T PF06500_consen 190 YPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQD-S---SRLHQAVLDYLASRPWVDHTRVGA 265 (411)
T ss_dssp EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S--C---CHHHHHHHHHHHHSTTEEEEEEEE
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcC-H---HHHHHHHHHHHhcCCccChhheEE
Confidence 477888888888776654 455667 999999999999999864333322 2 2233333333333 34569999
Q ss_pred EecChhHHHHHHHHHhCCCccceeEEecCCCCCCC-CCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHH
Q 024681 91 VGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN-DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAV 169 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
+|.|+||.+|.++|..++++++++|..+++....- ........+.. ..
T Consensus 266 ~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~m-------------------------------y~ 314 (411)
T PF06500_consen 266 WGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDM-------------------------------YL 314 (411)
T ss_dssp EEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HH-------------------------------HH
T ss_pred EEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHH-------------------------------HH
Confidence 99999999999999999899999999998643211 10000000000 11
Q ss_pred HHHHHhhcccCchhhhhhhhhhcCCccc--ccc--CCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCC-C
Q 024681 170 REFSRTLFNMRPDISLFVSKTVFDTDLR--GIL--GLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG-H 244 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H 244 (264)
+.+...+. ........+...+...+.. ..+ .+.++|+|.+.|++|+++|.+..+-++..-.+ .+...++... |
T Consensus 315 d~LA~rlG-~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~-gk~~~~~~~~~~ 392 (411)
T PF06500_consen 315 DVLASRLG-MAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTD-GKALRIPSKPLH 392 (411)
T ss_dssp HHHHHHCT--SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE-SSSHH
T ss_pred HHHHHHhC-CccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCC-CceeecCCCccc
Confidence 11111111 0111111111111222221 233 56789999999999999999999999888776 6777777544 4
Q ss_pred ccc
Q 024681 245 LPH 247 (264)
Q Consensus 245 ~~~ 247 (264)
..+
T Consensus 393 ~gy 395 (411)
T PF06500_consen 393 MGY 395 (411)
T ss_dssp HHH
T ss_pred cch
Confidence 443
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.4e-17 Score=121.45 Aligned_cols=226 Identities=16% Similarity=0.144 Sum_probs=126.2
Q ss_pred CCceEEEecCCCCCh-hhH-HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCe
Q 024681 16 GDRILVLAHGFGTDQ-SAW-QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNR 87 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~-~~~-~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 87 (264)
..|+||++||+.+++ +.| +.++..+ +||+|++++.||+|.|.-.. +.-|+ ....+|+.++++++ -..+
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT--pr~f~--ag~t~Dl~~~v~~i~~~~P~a~ 199 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT--PRLFT--AGWTEDLREVVNHIKKRYPQAP 199 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC--Cceee--cCCHHHHHHHHHHHHHhCCCCc
Confidence 458999999976654 333 4555555 99999999999999996542 23332 23445555555554 4468
Q ss_pred EEEEecChhHHHHHHHHHhCCC---ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPD---LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
...+|.||||.+.+.+..+..+ .+.++++++|.-.......+...........+ +...............+...
T Consensus 200 l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~---l~~~l~~~~~~~r~~~~~~~ 276 (409)
T KOG1838|consen 200 LFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRA---LTLNLKRIVLRHRHTLFEDP 276 (409)
T ss_pred eEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHH---HHHhHHHHHhhhhhhhhhcc
Confidence 9999999999999999887543 34555555553211111111111111111111 11112211111111111100
Q ss_pred C-------hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH-HHHHHHcCCCceE
Q 024681 165 V-------PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA-EYLQRHLGGRNTV 236 (264)
Q Consensus 165 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~ 236 (264)
. ...++++-+.+... ..........+...+....+.+|++|+|+|++.+|+++|.+.. .......|+ +-+
T Consensus 277 vd~d~~~~~~SvreFD~~~t~~-~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~-v~l 354 (409)
T KOG1838|consen 277 VDFDVILKSRSVREFDEALTRP-MFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPN-VLL 354 (409)
T ss_pred chhhhhhhcCcHHHHHhhhhhh-hcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCc-EEE
Confidence 0 01222222222110 0111112222334556677899999999999999999998543 344555566 667
Q ss_pred EEecCCCCcccccC
Q 024681 237 ELLKIEGHLPHLSA 250 (264)
Q Consensus 237 ~~~~~~gH~~~~~~ 250 (264)
.+-..+||..++|.
T Consensus 355 ~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 355 VITSHGGHLGFLEG 368 (409)
T ss_pred EEeCCCceeeeecc
Confidence 77778999888776
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-17 Score=125.26 Aligned_cols=255 Identities=18% Similarity=0.187 Sum_probs=155.6
Q ss_pred ceeeEEEEeCCC----CceEEEecCCCCChhhH-HHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 5 LEALHVRVVGTG----DRILVLAHGFGTDQSAW-QRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 5 ~~~~~~~~~g~~----~p~vv~~hG~~~~~~~~-~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
..-++|....+. +|+||++..+.++.... +.+.+.| .|+.|+..|+..-+..+.. ...+ +++++++.+.+
T Consensus 86 ~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~---~~~f-~ldDYi~~l~~ 161 (406)
T TIGR01849 86 CRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLS---AGKF-DLEDYIDYLIE 161 (406)
T ss_pred eEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchh---cCCC-CHHHHHHHHHH
Confidence 455677555332 37999999988766544 5677888 9999999999877654321 1333 49999999999
Q ss_pred HHHHhCCCeEEEEecChhHHHHHHHHHhC-----CCccceeEEecCCCCCCCCCCCCCCccH-HHHHHHHHHH-------
Q 024681 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRR-----PDLFTKLILIGASPRFLNDEDYHGGFEE-AEIDKVFRAM------- 145 (264)
Q Consensus 79 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------- 145 (264)
+++.+|.+ ++++|+|+||..++.+++.. |++++++++++++..+...+.....+.. ..+..+....
T Consensus 162 ~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~ 240 (406)
T TIGR01849 162 FIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFP 240 (406)
T ss_pred HHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCcc
Confidence 99999877 99999999999977666554 6679999999997665432111111100 0000011000
Q ss_pred -------------------Hhh----hhhhhhhcccccCCCCCh-HHHHHHH---HhhcccCchhhhhhhhhhcCCcc--
Q 024681 146 -------------------EAN----YEAWAYGYAPLAVGADVP-AAVREFS---RTLFNMRPDISLFVSKTVFDTDL-- 196 (264)
Q Consensus 146 -------------------~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-- 196 (264)
..+ ...+...+.....+.... .....+. ...............+.++..+.
T Consensus 241 ~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~ 320 (406)
T TIGR01849 241 YPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLP 320 (406)
T ss_pred ccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCcc
Confidence 000 011111111111111111 1111111 22223333444444433332221
Q ss_pred ---------ccccCCcc-cCEEEEecCCCCCcchhhHHHHHHHc---CCC-ceEEEecCCCCccccc---ChhcHHHHHH
Q 024681 197 ---------RGILGLVR-VPCVIIQTSKDVSVPVSVAEYLQRHL---GGR-NTVELLKIEGHLPHLS---APAIVGPVIR 259 (264)
Q Consensus 197 ---------~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~-~~~~~~~~~gH~~~~~---~~~~~~~~i~ 259 (264)
.-.+++|+ +|++.+.|++|.++|+..++.+.+.+ +.. ++....+++||..... ..+++...|.
T Consensus 321 ~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~ 400 (406)
T TIGR01849 321 QGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVR 400 (406)
T ss_pred CCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHH
Confidence 23467888 99999999999999999999988874 532 4567777899975553 3478899999
Q ss_pred HHhcC
Q 024681 260 RALSR 264 (264)
Q Consensus 260 ~fl~~ 264 (264)
+||.+
T Consensus 401 ~wl~~ 405 (406)
T TIGR01849 401 EFIRR 405 (406)
T ss_pred HHHHh
Confidence 99864
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-17 Score=122.95 Aligned_cols=225 Identities=16% Similarity=0.084 Sum_probs=128.1
Q ss_pred cceeeEEEEe-CCC-CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCC----------------CCC-C
Q 024681 4 LLEALHVRVV-GTG-DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPD----------------YFD-F 63 (264)
Q Consensus 4 ~~~~~~~~~~-g~~-~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~----------------~~~-~ 63 (264)
.+....+... +++ -|.||.+||.++....+......- .||.|+.+|.||+|..... ..+ +
T Consensus 68 ~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~ 147 (320)
T PF05448_consen 68 RVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNP 147 (320)
T ss_dssp EEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-T
T ss_pred EEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCch
Confidence 3444445555 333 379999999999987787766666 9999999999999932210 001 2
Q ss_pred cccchHHHHHHHHHHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHH
Q 024681 64 RRYTTLDAYVDDLLNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAE 137 (264)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 137 (264)
+.+. +..+..|....++.+ +.+++.+.|.|+||.+++.+|+..| +|++++...|....
T Consensus 148 e~~y-yr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d-------------- 211 (320)
T PF05448_consen 148 EDYY-YRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD-------------- 211 (320)
T ss_dssp TT-H-HHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS--------------
T ss_pred HHHH-HHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc--------------
Confidence 2232 444556666555554 2358999999999999999999886 69999998874321
Q ss_pred HHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCC
Q 024681 138 IDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVS 217 (264)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 217 (264)
+...+.... ....-.....+.+... ..+.........+...|.....++|++|+++-.|-.|.+
T Consensus 212 ~~~~~~~~~---------------~~~~y~~~~~~~~~~d-~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~ 275 (320)
T PF05448_consen 212 FRRALELRA---------------DEGPYPEIRRYFRWRD-PHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPV 275 (320)
T ss_dssp HHHHHHHT-----------------STTTHHHHHHHHHHS-CTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SS
T ss_pred hhhhhhcCC---------------ccccHHHHHHHHhccC-CCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCC
Confidence 000000000 0000001111211111 112233334444455677777888999999999999999
Q ss_pred cchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 218 VPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+|++.....++.++..+++.++|..||-...+. -.+...+||.
T Consensus 276 cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~~---~~~~~~~~l~ 318 (320)
T PF05448_consen 276 CPPSTQFAAYNAIPGPKELVVYPEYGHEYGPEF---QEDKQLNFLK 318 (320)
T ss_dssp S-HHHHHHHHCC--SSEEEEEETT--SSTTHHH---HHHHHHHHHH
T ss_pred CCchhHHHHHhccCCCeeEEeccCcCCCchhhH---HHHHHHHHHh
Confidence 999999999999987789999999999554332 1455555553
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-17 Score=117.98 Aligned_cols=219 Identities=14% Similarity=0.129 Sum_probs=132.8
Q ss_pred ceEEEecCCCCChhhHHHhhhhc-CC-ceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC-eEEEEecC
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL-NH-HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN-RCAYVGHS 94 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l-~g-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 94 (264)
++|+|+|+.+++...|..+++.| .. +.|+.++.+|.+...+ ...+++++++...+.+.....+ ++.|+|||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~------~~~si~~la~~y~~~I~~~~~~gp~~L~G~S 74 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP------PPDSIEELASRYAEAIRARQPEGPYVLAGWS 74 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH------EESSHHHHHHHHHHHHHHHTSSSSEEEEEET
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC------CCCCHHHHHHHHHHHhhhhCCCCCeeehccC
Confidence 47999999999999999999999 75 9999999999983322 2236999999999888887665 99999999
Q ss_pred hhHHHHHHHHHhC---CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 95 VSAMIGLLASIRR---PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 95 ~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
+||.+|+.+|.+. ...+..++++++.+......... ...........+...... .... .........
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~ 144 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRS---REPSDEQFIEELRRIGGT-PDAS------LEDEELLAR 144 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHH---HHCHHHHHHHHHHHHCHH-HHHH------CHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhh---hhhhHHHHHHHHHHhcCC-chhh------hcCHHHHHH
Confidence 9999999999763 34689999999754321100000 000000011111100000 0000 000001111
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh---hHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS---VAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
....+. .......... ......-.+|.++.....|...... ....+.+...+..+++.++ ++|+.++
T Consensus 145 ~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l 214 (229)
T PF00975_consen 145 LLRALR--------DDFQALENYS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSML 214 (229)
T ss_dssp HHHHHH--------HHHHHHHTCS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGHH
T ss_pred HHHHHH--------HHHHHHhhcc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEec
Confidence 111110 0000000110 0001111567888888888887655 3444777777657788888 7998887
Q ss_pred c-ChhcHHHHHHHHh
Q 024681 249 S-APAIVGPVIRRAL 262 (264)
Q Consensus 249 ~-~~~~~~~~i~~fl 262 (264)
+ +..++++.|.++|
T Consensus 215 ~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 215 KPHVAEIAEKIAEWL 229 (229)
T ss_dssp STTHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhccC
Confidence 6 6688999988876
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-17 Score=118.09 Aligned_cols=178 Identities=16% Similarity=0.080 Sum_probs=112.9
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCc--ccc-----hHHHHHHHHHHHHHHhC--
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFR--RYT-----TLDAYVDDLLNILDTLG-- 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~-- 84 (264)
..|.||++|++.+-....+.++..| +||.|+++|+-+-....+...... .+. ..+...+++.+.++.+.
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 4589999999888778888899999 999999999865443111110000 010 02345667766666652
Q ss_pred ----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccccc
Q 024681 85 ----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA 160 (264)
Q Consensus 85 ----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
.+++.++|+|+||.+++.+|.+. +.+++.|..-|....
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------------------- 134 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------------------- 134 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------------------
Confidence 25899999999999999999887 578998887761000
Q ss_pred CCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc---CCCceEE
Q 024681 161 VGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL---GGRNTVE 237 (264)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~ 237 (264)
........++++|+++++|++|+.++.+..+.+.+.+ ....+++
T Consensus 135 ---------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (218)
T PF01738_consen 135 ---------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVH 181 (218)
T ss_dssp ---------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEE
T ss_pred ---------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEE
Confidence 0001123456899999999999999999888877776 2228999
Q ss_pred EecCCCCcccccCh--------hcHHHHHHHHhcC
Q 024681 238 LLKIEGHLPHLSAP--------AIVGPVIRRALSR 264 (264)
Q Consensus 238 ~~~~~gH~~~~~~~--------~~~~~~i~~fl~~ 264 (264)
+++|++|.+..... ++-.+.+.+||++
T Consensus 182 ~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 182 VYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp EETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred ECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999996655432 3456667777764
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-16 Score=113.71 Aligned_cols=106 Identities=15% Similarity=0.125 Sum_probs=72.6
Q ss_pred CCceEEEecCCCCChhhHH---Hhhhhc--CCceEEEecCCCCCCCCCCC--CCCc----ccchHHHHHHHHHHHHHHhC
Q 024681 16 GDRILVLAHGFGTDQSAWQ---RILPYL--NHHRVIMFDLVCAGSVNPDY--FDFR----RYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~---~~~~~l--~g~~v~~~d~~g~G~s~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~ 84 (264)
..|+||++||.+++...+. .+...+ .||.|+++|.+|++.+.... .... ......++.+-+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4689999999999887775 344445 69999999999987543210 0000 00012222222223333333
Q ss_pred --CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.++++|+|||+||.+++.++.++|+.+.+++.+++.+
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3589999999999999999999999999999888754
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-17 Score=113.61 Aligned_cols=195 Identities=17% Similarity=0.153 Sum_probs=131.6
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCC----CCC--------------CcccchHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPD----YFD--------------FRRYTTLDAYVDDL 76 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~----~~~--------------~~~~~~~~~~~~~~ 76 (264)
..|.||-.||.+++...|..+...- .||.|+.+|.||.|.|+.. ... .+.|. ......|+
T Consensus 82 ~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yy-yr~v~~D~ 160 (321)
T COG3458 82 KLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYY-YRGVFLDA 160 (321)
T ss_pred ccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceE-EeeehHHH
Confidence 3489999999999999888888777 9999999999999988321 000 12222 22333444
Q ss_pred HHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhh
Q 024681 77 LNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYE 150 (264)
Q Consensus 77 ~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
..+++.+ ..+++.+.|.|.||.+++.+++..| +++++++.-|..... .
T Consensus 161 ~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df-------------------------~ 214 (321)
T COG3458 161 VRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDF-------------------------P 214 (321)
T ss_pred HHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccc-------------------------h
Confidence 4444433 4468999999999999999998776 799999888742210 0
Q ss_pred hhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 151 AWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
++... ........+..+.+ ...+. ....+..+...|......++++|+|+..|--|+++|+...-..++++
T Consensus 215 r~i~~-----~~~~~ydei~~y~k---~h~~~-e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l 285 (321)
T COG3458 215 RAIEL-----ATEGPYDEIQTYFK---RHDPK-EAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNAL 285 (321)
T ss_pred hheee-----cccCcHHHHHHHHH---hcCch-HHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcc
Confidence 00000 00000111222222 22222 33444445556677778889999999999999999999999999999
Q ss_pred CCCceEEEecCCCCcc
Q 024681 231 GGRNTVELLKIEGHLP 246 (264)
Q Consensus 231 ~~~~~~~~~~~~gH~~ 246 (264)
+..+++.+++--+|.-
T Consensus 286 ~~~K~i~iy~~~aHe~ 301 (321)
T COG3458 286 TTSKTIEIYPYFAHEG 301 (321)
T ss_pred cCCceEEEeecccccc
Confidence 8877888888777743
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.4e-17 Score=130.03 Aligned_cols=117 Identities=15% Similarity=0.192 Sum_probs=84.7
Q ss_pred CCcceeeEEEEeCC-CCceEEEecCCCCChh---hH-HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHH
Q 024681 2 GDLLEALHVRVVGT-GDRILVLAHGFGTDQS---AW-QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 2 g~~~~~~~~~~~g~-~~p~vv~~hG~~~~~~---~~-~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
|..+....|...+. ..|+||++||++.+.. .+ ......| +||.|+++|+||+|.|.... ..+ + ...++
T Consensus 6 G~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~---~~~-~-~~~~~ 80 (550)
T TIGR00976 6 GTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEF---DLL-G-SDEAA 80 (550)
T ss_pred CCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCce---Eec-C-cccch
Confidence 33333333444443 4589999999987653 12 2233445 89999999999999997531 111 1 45677
Q ss_pred HHHHHHHHhC-----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 75 DLLNILDTLG-----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 75 ~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
|+.++++++. ..++.++|||+||.+++.+|..+|++++++|..++....
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 7777777763 258999999999999999999999999999998886543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.7e-17 Score=125.10 Aligned_cols=104 Identities=12% Similarity=0.189 Sum_probs=80.9
Q ss_pred CCCceEEEecCCCCCh--hhHHH-hhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----
Q 024681 15 TGDRILVLAHGFGTDQ--SAWQR-ILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---- 83 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~--~~~~~-~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 83 (264)
...|++|++||++.+. ..|.. +.+.| .+|+|+++|++|+|.|.... ... .....++++.++++.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~---a~~-~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT---SAA-YTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc---ccc-cHHHHHHHHHHHHHHHHHhh
Confidence 3568999999998753 45665 55554 36999999999999885431 111 2456677777777755
Q ss_pred --CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 84 --GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 84 --~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+.++++|+||||||.+|..++.+.|++|.++++++|+..
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 367999999999999999999999999999999999754
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.4e-16 Score=111.77 Aligned_cols=173 Identities=18% Similarity=0.140 Sum_probs=127.3
Q ss_pred ceeeEEEEeCCCC-ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCC-CCCCCCCCCCccc-------chHHHHH
Q 024681 5 LEALHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCA-GSVNPDYFDFRRY-------TTLDAYV 73 (264)
Q Consensus 5 ~~~~~~~~~g~~~-p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~-G~s~~~~~~~~~~-------~~~~~~~ 73 (264)
+.....+..+.+. |.||++|++.+-....+.+++.| .||.|+++|+-+. |.+.......... .+..+..
T Consensus 14 ~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (236)
T COG0412 14 LPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVL 93 (236)
T ss_pred EeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHH
Confidence 3444455555544 89999999999888999999999 9999999999764 3332211011000 1236777
Q ss_pred HHHHHHHHHhC------CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh
Q 024681 74 DDLLNILDTLG------VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA 147 (264)
Q Consensus 74 ~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
.|+.+.++.+. .++|.++|+||||.+++.++.+.| .+++.+..-+.....
T Consensus 94 ~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~----------------------- 149 (236)
T COG0412 94 ADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD----------------------- 149 (236)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC-----------------------
Confidence 88888888773 357999999999999999999887 689988887742210
Q ss_pred hhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHH
Q 024681 148 NYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ 227 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 227 (264)
......++++|+++..|+.|..+|....+.+.
T Consensus 150 ------------------------------------------------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~ 181 (236)
T COG0412 150 ------------------------------------------------DTADAPKIKVPVLLHLAGEDPYIPAADVDALA 181 (236)
T ss_pred ------------------------------------------------cccccccccCcEEEEecccCCCCChhHHHHHH
Confidence 00113467999999999999999998888887
Q ss_pred HHcCCC---ceEEEecCCCCccccc
Q 024681 228 RHLGGR---NTVELLKIEGHLPHLS 249 (264)
Q Consensus 228 ~~~~~~---~~~~~~~~~gH~~~~~ 249 (264)
+.+... +++.+++++.|.+..+
T Consensus 182 ~~~~~~~~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 182 AALEDAGVKVDLEIYPGAGHGFAND 206 (236)
T ss_pred HHHHhcCCCeeEEEeCCCccccccC
Confidence 776543 6789999998977644
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-16 Score=109.55 Aligned_cols=173 Identities=20% Similarity=0.259 Sum_probs=117.4
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCC--CCC-CCCCCCCcccc------hHHHHHHHHHHHHHHhCC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCA--GSV-NPDYFDFRRYT------TLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~--G~s-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 85 (264)
..|+||++||+|++...+.++...+ .+++++.+.-+-- |.- -....+...++ ..+.+++-+..+.++.++
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 4568999999999999998877766 7777776543211 100 00001111221 233444455555556666
Q ss_pred --CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 86 --NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 86 --~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
++++++|+|.||.+++.+..++|+.++++|++.+.......
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~------------------------------------- 139 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE------------------------------------- 139 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc-------------------------------------
Confidence 69999999999999999999999999999999985331110
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEec
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLK 240 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~ 240 (264)
..-..-..|+++++|+.|+++|...+.++.+.+... ++...++
T Consensus 140 ----------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~ 185 (207)
T COG0400 140 ----------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE 185 (207)
T ss_pred ----------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 000112679999999999999998888887766432 7788888
Q ss_pred CCCCcccccChhcHHHHHHH
Q 024681 241 IEGHLPHLSAPAIVGPVIRR 260 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~ 260 (264)
.||.+..+.-+...+++.+
T Consensus 186 -~GH~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 186 -GGHEIPPEELEAARSWLAN 204 (207)
T ss_pred -CCCcCCHHHHHHHHHHHHh
Confidence 9998876555555444443
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=109.23 Aligned_cols=250 Identities=16% Similarity=0.181 Sum_probs=146.1
Q ss_pred CCcceeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHH-HHHHH
Q 024681 2 GDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYV-DDLLN 78 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~-~~~~~ 78 (264)
|..+..-.|...++.+..++.-.+++.....|++++..+ +||.|+++|+||.|.|++.......+. +.|++ .|+.+
T Consensus 15 G~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~-~~DwA~~D~~a 93 (281)
T COG4757 15 GYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWR-YLDWARLDFPA 93 (281)
T ss_pred CccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccc-hhhhhhcchHH
Confidence 333444455555554446677777888888999999999 999999999999999987654444443 44444 35555
Q ss_pred HHHHh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhh
Q 024681 79 ILDTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAY 154 (264)
Q Consensus 79 ~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (264)
.++.+ .-.+.+.+|||+||.+.-.+. +++ +..+....+..+.+............ ..+..........|..
T Consensus 94 al~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~---~~l~~lv~p~lt~w~g 168 (281)
T COG4757 94 ALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGA---VLLWNLVGPPLTFWKG 168 (281)
T ss_pred HHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccc---eeeccccccchhhccc
Confidence 55544 345899999999998755444 344 56666666654443221111000000 0001111111222222
Q ss_pred hcccccCCCC--ChH-HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 155 GYAPLAVGAD--VPA-AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 155 ~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
.+...+.+.. .+. ..+++.+.....+....... .....+..+.+++|+..+...+|+.+|+...+.+.+..+
T Consensus 169 ~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~-----~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~ 243 (281)
T COG4757 169 YMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPA-----MRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYR 243 (281)
T ss_pred cCcHhhcCCCccCcchHHHHHHHHhcCccccccChh-----HhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhh
Confidence 2222222222 111 33444433322111100000 112345567789999999999999999999999999888
Q ss_pred CC-ceEEEecC----CCCcccccCh-hcHHHHHHHHh
Q 024681 232 GR-NTVELLKI----EGHLPHLSAP-AIVGPVIRRAL 262 (264)
Q Consensus 232 ~~-~~~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 262 (264)
+. .+...++. -||+-...++ |.+.+.+.+|+
T Consensus 244 nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 244 NAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 74 34444443 5998887777 77777777765
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.9e-16 Score=106.18 Aligned_cols=158 Identities=23% Similarity=0.312 Sum_probs=103.4
Q ss_pred EEEecCCCCCh-hhHHHhh-hhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 20 LVLAHGFGTDQ-SAWQRIL-PYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 20 vv~~hG~~~~~-~~~~~~~-~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
|+++||++++. ..|.... +.| ..++|-..++ +.+ +.+++.+.+.+.+.... +++++||||+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~~P--------~~~~W~~~l~~~i~~~~-~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------DNP--------DLDEWVQALDQAIDAID-EPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------TS----------HHHHHHHHHHCCHC-T-TTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------CCC--------CHHHHHHHHHHHHhhcC-CCeEEEEeCHH
Confidence 68999988875 5666554 455 4577776665 111 47888888888877664 57999999999
Q ss_pred HHHHHHHH-HhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHh
Q 024681 97 AMIGLLAS-IRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRT 175 (264)
Q Consensus 97 g~~a~~~a-~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (264)
+..+++++ .....+|++++|++|+... . ... ..+.
T Consensus 66 c~~~l~~l~~~~~~~v~g~lLVAp~~~~-~-----------------------~~~----~~~~---------------- 101 (171)
T PF06821_consen 66 CLTALRWLAEQSQKKVAGALLVAPFDPD-D-----------------------PEP----FPPE---------------- 101 (171)
T ss_dssp HHHHHHHHHHTCCSSEEEEEEES--SCG-C-----------------------HHC----CTCG----------------
T ss_pred HHHHHHHHhhcccccccEEEEEcCCCcc-c-----------------------ccc----hhhh----------------
Confidence 99999999 7778899999999985220 0 000 0000
Q ss_pred hcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcH
Q 024681 176 LFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIV 254 (264)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 254 (264)
.. ... ......+.+|.++|.+++|+++|.+.++++++.+. ++++.++++||+...+.-.++
T Consensus 102 ~~---------------~f~-~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GHf~~~~G~~~~ 162 (171)
T PF06821_consen 102 LD---------------GFT-PLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGHFNAASGFGPW 162 (171)
T ss_dssp GC---------------CCT-TSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSGGGTHSS-
T ss_pred cc---------------ccc-cCcccccCCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCCcccccCCCch
Confidence 00 000 00112346678999999999999999999999997 689999999998876654443
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-15 Score=113.88 Aligned_cols=105 Identities=18% Similarity=0.202 Sum_probs=73.2
Q ss_pred CCCCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC--
Q 024681 14 GTGDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-- 85 (264)
Q Consensus 14 g~~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 85 (264)
+.+.|+||++||.+ ++...|..+++.| .|+.|+++|+|...+...+ ....+..+..+.+.+..+.+++
T Consensus 78 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p----~~~~D~~~a~~~l~~~~~~~~~d~ 153 (318)
T PRK10162 78 PDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFP----QAIEEIVAVCCYFHQHAEDYGINM 153 (318)
T ss_pred CCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCC----CcHHHHHHHHHHHHHhHHHhCCCh
Confidence 44558999999966 5566788888888 4999999999976543211 1111233333444444455554
Q ss_pred CeEEEEecChhHHHHHHHHHhC------CCccceeEEecCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRR------PDLFTKLILIGASPR 122 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~ 122 (264)
++++++|+|+||.+|+.++.+. +.++++++++.|...
T Consensus 154 ~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 154 SRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred hHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 5899999999999999988653 357899999987543
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.2e-16 Score=103.50 Aligned_cols=166 Identities=22% Similarity=0.251 Sum_probs=116.1
Q ss_pred CCceEEEecC---CCCC--hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC---
Q 024681 16 GDRILVLAHG---FGTD--QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--- 85 (264)
Q Consensus 16 ~~p~vv~~hG---~~~~--~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 85 (264)
..|..|++|. ++++ ...-..++..| .||.++.+|+||.|.|.... +. -.-..+|..++++++..
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f-D~-----GiGE~~Da~aaldW~~~~hp 100 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF-DN-----GIGELEDAAAALDWLQARHP 100 (210)
T ss_pred CCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc-cC-----CcchHHHHHHHHHHHHhhCC
Confidence 4578888886 2222 23445666777 89999999999999997641 11 12234555556655532
Q ss_pred --CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 86 --NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 86 --~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
....+.|+|+|+++++.+|.+.|+ ....+.+.+.... +
T Consensus 101 ~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~----------------------------~----------- 140 (210)
T COG2945 101 DSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA----------------------------Y----------- 140 (210)
T ss_pred CchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCc----------------------------h-----------
Confidence 234689999999999999999986 4444444442110 0
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCC
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG 243 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 243 (264)
+ ...+....+|.++|+|+.|.+++....-.+++..+ .+++.+++++
T Consensus 141 -------------------------------d-fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~--~~~i~i~~a~ 186 (210)
T COG2945 141 -------------------------------D-FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIK--ITVITIPGAD 186 (210)
T ss_pred -------------------------------h-hhhccCCCCCceeEecChhhhhcHHHHHHhhcCCC--CceEEecCCC
Confidence 0 01133447799999999999999888888887744 6889999999
Q ss_pred CcccccChhcHHHHHHHHh
Q 024681 244 HLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 244 H~~~~~~~~~~~~~i~~fl 262 (264)
|+++- +-..+.+.+.+||
T Consensus 187 HFF~g-Kl~~l~~~i~~~l 204 (210)
T COG2945 187 HFFHG-KLIELRDTIADFL 204 (210)
T ss_pred ceecc-cHHHHHHHHHHHh
Confidence 99885 4567888888887
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.1e-17 Score=118.40 Aligned_cols=110 Identities=15% Similarity=0.197 Sum_probs=80.4
Q ss_pred EEEeCCCCceEEEecCCCCCh-hhHHH-hhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-
Q 024681 10 VRVVGTGDRILVLAHGFGTDQ-SAWQR-ILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL- 83 (264)
Q Consensus 10 ~~~~g~~~p~vv~~hG~~~~~-~~~~~-~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (264)
+....+.+|++|++||++++. ..|.. +...+ .+|+|+++|+++++.+... .... +...+.+++..+++.+
T Consensus 29 ~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~---~a~~-~~~~v~~~la~~l~~L~ 104 (275)
T cd00707 29 NSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP---QAVN-NTRVVGAELAKFLDFLV 104 (275)
T ss_pred hcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH---HHHH-hHHHHHHHHHHHHHHHH
Confidence 333455678999999999887 56654 44444 5799999999988433211 1111 3555566666666554
Q ss_pred -----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 84 -----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 84 -----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
+.++++++||||||.+|..++.++|++++++++++|+...
T Consensus 105 ~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 105 DNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 3468999999999999999999999999999999987543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=124.55 Aligned_cols=90 Identities=19% Similarity=0.236 Sum_probs=74.3
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCC---------CCCCccc----------chHHHHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPD---------YFDFRRY----------TTLDAYVDD 75 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~---------~~~~~~~----------~~~~~~~~~ 75 (264)
.|+||++||++++...|..+++.| +||+|+++|+||||.|... ......| .++.+.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 368999999999999999999999 7999999999999999432 1111123 258999999
Q ss_pred HHHHHHHhC----------------CCeEEEEecChhHHHHHHHHHh
Q 024681 76 LLNILDTLG----------------VNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 76 ~~~~~~~~~----------------~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+..+...++ ..+++++||||||.++..++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 998888776 2489999999999999999875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.9e-15 Score=110.32 Aligned_cols=99 Identities=20% Similarity=0.230 Sum_probs=85.7
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--C---------CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--N---------HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~---------g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (264)
.|++++|||+++-..|..+++.| . -|.|+++.+||+|.|+.+ ....+. ..+.+.-+..++-++|.+
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~--sk~GFn-~~a~ArvmrkLMlRLg~n 229 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAP--SKTGFN-AAATARVMRKLMLRLGYN 229 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCC--ccCCcc-HHHHHHHHHHHHHHhCcc
Confidence 48999999999999999999988 2 278999999999999865 234554 778888899999999999
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
++.+-|..||+.++..+|..+|++|.++-+-.+
T Consensus 230 kffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 230 KFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred eeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 999999999999999999999999987655433
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.1e-15 Score=107.28 Aligned_cols=239 Identities=16% Similarity=0.161 Sum_probs=90.9
Q ss_pred eEEEEeCC-CCceEEEecCCCCCh---hhHHHhhhhc--CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHH
Q 024681 8 LHVRVVGT-GDRILVLAHGFGTDQ---SAWQRILPYL--NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLL 77 (264)
Q Consensus 8 ~~~~~~g~-~~p~vv~~hG~~~~~---~~~~~~~~~l--~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~ 77 (264)
+.|...+. .+..||||.|++... .+...+++.| .+|.++-+.++ |+|-+ ++++-++||.
T Consensus 23 fe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~-----------SL~~D~~eI~ 91 (303)
T PF08538_consen 23 FEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS-----------SLDRDVEEIA 91 (303)
T ss_dssp EEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-------------HHHHHHHHH
T ss_pred EEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc-----------hhhhHHHHHH
Confidence 33443333 334899999987644 4567788888 69999999875 44433 5777788877
Q ss_pred HHHHHh--------CCCeEEEEecChhHHHHHHHHHhCC-----CccceeEEecCCCCCCCCCCCCCCccH-HHHHHHHH
Q 024681 78 NILDTL--------GVNRCAYVGHSVSAMIGLLASIRRP-----DLFTKLILIGASPRFLNDEDYHGGFEE-AEIDKVFR 143 (264)
Q Consensus 78 ~~~~~~--------~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 143 (264)
++++++ +.++|+|+|||.|+.-+++++.... ..|+++|+-+|... .+........ ........
T Consensus 92 ~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD---REa~~~~~~~~~~~~~~v~ 168 (303)
T PF08538_consen 92 QLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD---REAILNFLGEREAYEELVA 168 (303)
T ss_dssp HHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE------TTSTTTSHHH---HHHHHH
T ss_pred HHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC---hhHhhhcccchHHHHHHHH
Confidence 777655 2468999999999999999988642 57999999998543 2222222221 12222222
Q ss_pred HHHhhhh-----hhh-hhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCC
Q 024681 144 AMEANYE-----AWA-YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVS 217 (264)
Q Consensus 144 ~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 217 (264)
....... ..+ ..+...... ..+-....+...... ...-.-+...+....+...+.+++.|+|++.+++|..
T Consensus 169 ~A~~~i~~g~~~~~lp~~~~~~~~~-~~PiTA~Rf~SL~s~--~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEy 245 (303)
T PF08538_consen 169 LAKELIAEGKGDEILPREFTPLVFY-DTPITAYRFLSLASP--GGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEY 245 (303)
T ss_dssp HHHHHHHCT-TT-GG----GGTTT--SS---HHHHHT-S-S--SHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-
T ss_pred HHHHHHHcCCCCceeeccccccccC-CCcccHHHHHhccCC--CCcccccCCCCCHHHHHHHhccCCCceEEEecCCCce
Confidence 2111100 000 001111110 111111111111111 1111112223334455567788899999999999999
Q ss_pred cchhhH-HHHHHHcCCC-------ceEEEecCCCCcccccCh----hcHHHHHHHHhc
Q 024681 218 VPVSVA-EYLQRHLGGR-------NTVELLKIEGHLPHLSAP----AIVGPVIRRALS 263 (264)
Q Consensus 218 ~~~~~~-~~~~~~~~~~-------~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 263 (264)
+|...- +.+.+++... ....++||++|.+-.+.. +.+.+.+..||+
T Consensus 246 vP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 246 VPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ----------------------------------------------------------
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 986442 3333333221 234589999998765433 357888888874
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.6e-14 Score=96.64 Aligned_cols=177 Identities=14% Similarity=0.096 Sum_probs=107.6
Q ss_pred EEEecCCCCChhhHHH--hhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEec
Q 024681 20 LVLAHGFGTDQSAWQR--ILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGH 93 (264)
Q Consensus 20 vv~~hG~~~~~~~~~~--~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 93 (264)
|+++||+.++...... +.+.+ ....+.++|++. ......+.+.++++....+.+.|+|.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 7999999998876643 33444 345667777641 36667788888898887777999999
Q ss_pred ChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChH--HHHH
Q 024681 94 SVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPA--AVRE 171 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 171 (264)
|+||..|..+|.+++ +++ |+++|+... ...+ ...+. .......... ....
T Consensus 67 SlGG~~A~~La~~~~--~~a-vLiNPav~p-----------~~~l---~~~iG-----------~~~~~~~~e~~~~~~~ 118 (187)
T PF05728_consen 67 SLGGFYATYLAERYG--LPA-VLINPAVRP-----------YELL---QDYIG-----------EQTNPYTGESYELTEE 118 (187)
T ss_pred ChHHHHHHHHHHHhC--CCE-EEEcCCCCH-----------HHHH---HHhhC-----------ccccCCCCccceechH
Confidence 999999999999885 444 899986431 0000 01110 0000000000 0000
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccCh
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAP 251 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 251 (264)
...... .+......-..+++++.++.|.+++...+ .+.+.+ +..++.+|++|.+. +-
T Consensus 119 ~~~~l~-----------------~l~~~~~~~~~~~lvll~~~DEvLd~~~a---~~~~~~-~~~~i~~ggdH~f~--~f 175 (187)
T PF05728_consen 119 HIEELK-----------------ALEVPYPTNPERYLVLLQTGDEVLDYREA---VAKYRG-CAQIIEEGGDHSFQ--DF 175 (187)
T ss_pred hhhhcc-----------------eEeccccCCCccEEEEEecCCcccCHHHH---HHHhcC-ceEEEEeCCCCCCc--cH
Confidence 000000 00000122256899999999999988433 444455 45567788999764 45
Q ss_pred hcHHHHHHHHh
Q 024681 252 AIVGPVIRRAL 262 (264)
Q Consensus 252 ~~~~~~i~~fl 262 (264)
++....|.+|+
T Consensus 176 ~~~l~~i~~f~ 186 (187)
T PF05728_consen 176 EEYLPQIIAFL 186 (187)
T ss_pred HHHHHHHHHhh
Confidence 66777888876
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.5e-14 Score=103.52 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=86.1
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-----CCceEEEecCCCCCCCCCCC---CCCcccchHHHHHHHHHHHHHHhC----
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-----NHHRVIMFDLVCAGSVNPDY---FDFRRYTTLDAYVDDLLNILDTLG---- 84 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-----~g~~v~~~d~~g~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---- 84 (264)
++.+++++|.++-...|..++..| .++.|+++.+.||-.++... .+...|+ +++.++.-.+++++.-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~s-L~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFS-LQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccC-HHHHHHHHHHHHHHHhhhhc
Confidence 358999999999999999988776 48999999999997775431 1234554 8888887777776652
Q ss_pred --CCeEEEEecChhHHHHHHHHHhCC---CccceeEEecCCCCC
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIRRP---DLFTKLILIGASPRF 123 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~ 123 (264)
..+++|+|||.|+++++++..+.+ .+|.+++++-|....
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 357999999999999999999999 789999999886544
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.6e-15 Score=108.84 Aligned_cols=127 Identities=17% Similarity=0.206 Sum_probs=82.7
Q ss_pred CCCcceeeEEEE--eCC-CCceEEEecCCCCCh-h--hHHHhhh-------hc--CCceEEEecCCCCCCCCCCCCCCcc
Q 024681 1 MGDLLEALHVRV--VGT-GDRILVLAHGFGTDQ-S--AWQRILP-------YL--NHHRVIMFDLVCAGSVNPDYFDFRR 65 (264)
Q Consensus 1 ~g~~~~~~~~~~--~g~-~~p~vv~~hG~~~~~-~--~~~~~~~-------~l--~g~~v~~~d~~g~G~s~~~~~~~~~ 65 (264)
+|..+..--|+. .+. .-|+||..|+++.+. . ....... .+ +||.|+..|.||.|.|.......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 455566666666 333 348999999988653 1 1111111 15 99999999999999997642111
Q ss_pred cchHHHHHHHHHHHHHHhC-----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCC
Q 024681 66 YTTLDAYVDDLLNILDTLG-----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG 132 (264)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 132 (264)
.....+|..++|+.+. ..+|.++|.|++|..++.+|...|..+++++...+.........+..+
T Consensus 79 ---~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG 147 (272)
T PF02129_consen 79 ---SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGG 147 (272)
T ss_dssp ---SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETT
T ss_pred ---ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCC
Confidence 4556777777777762 148999999999999999999888899999998876555443333333
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.1e-15 Score=122.01 Aligned_cols=206 Identities=16% Similarity=0.130 Sum_probs=125.1
Q ss_pred CCccee-eEEEEe---CCCCceEEEecCCCCChh--hHHHhhhhc--CCceEEEecCCCCCCCCCCCCC----CcccchH
Q 024681 2 GDLLEA-LHVRVV---GTGDRILVLAHGFGTDQS--AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFD----FRRYTTL 69 (264)
Q Consensus 2 g~~~~~-~~~~~~---g~~~p~vv~~hG~~~~~~--~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~----~~~~~~~ 69 (264)
|..+.. +.|+.. +...|+||++||..+... .|......| +||.|+.++.||-|.-...... .....++
T Consensus 426 G~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~ 505 (686)
T PRK10115 426 GVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTF 505 (686)
T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcH
Confidence 444443 445442 223589999999776653 355544555 9999999999997654321100 1111246
Q ss_pred HHHHHHHHHHHHHh--CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC---CCCCCCccHHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTL--GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND---EDYHGGFEEAEIDKVFRA 144 (264)
Q Consensus 70 ~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 144 (264)
+|+++.+..+++.- ..+++.+.|.|.||.++..++.++|++++++|...|....... .....
T Consensus 506 ~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~------------- 572 (686)
T PRK10115 506 NDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPL------------- 572 (686)
T ss_pred HHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCC-------------
Confidence 66666666666542 3468999999999999999999999999999999886432110 00000
Q ss_pred HHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccC-EEEEecCCCCCcchhhH
Q 024681 145 MEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVP-CVIIQTSKDVSVPVSVA 223 (264)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~ 223 (264)
...+...+ +.........++. ..+....+.+++.| +|+++|.+|.-||+..+
T Consensus 573 ----~~~~~~e~-----G~p~~~~~~~~l~------------------~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~ 625 (686)
T PRK10115 573 ----TTGEFEEW-----GNPQDPQYYEYMK------------------SYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEP 625 (686)
T ss_pred ----ChhHHHHh-----CCCCCHHHHHHHH------------------HcCchhccCccCCCceeEEecCCCCCcCchHH
Confidence 00000000 0000001111111 11222335567889 56779999999999998
Q ss_pred HHHHHHcCCC---ceEEEe---cCCCCccc
Q 024681 224 EYLQRHLGGR---NTVELL---KIEGHLPH 247 (264)
Q Consensus 224 ~~~~~~~~~~---~~~~~~---~~~gH~~~ 247 (264)
.++..++... .+.+++ +++||...
T Consensus 626 ~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 626 AKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred HHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 8888877432 566777 89999843
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.3e-15 Score=110.29 Aligned_cols=237 Identities=15% Similarity=0.150 Sum_probs=139.4
Q ss_pred eEEEEeCC--CCceEEEecCCCCChhhH-----HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 8 LHVRVVGT--GDRILVLAHGFGTDQSAW-----QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 8 ~~~~~~g~--~~p~vv~~hG~~~~~~~~-----~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
+.|+...+ .++|++++|.+-.....+ ..+...| +|..|+.+++++-..+... ...++|. .+.+.+.+..
T Consensus 96 iqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~-~~~edYi-~e~l~~aid~ 173 (445)
T COG3243 96 IQYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA-KNLEDYI-LEGLSEAIDT 173 (445)
T ss_pred hccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh-ccHHHHH-HHHHHHHHHH
Confidence 44444433 346899999977665554 3466666 9999999999877666431 1223333 3445555666
Q ss_pred HHHHhCCCeEEEEecChhHHHHHHHHHhCCCc-cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHH------------
Q 024681 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRRPDL-FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAM------------ 145 (264)
Q Consensus 79 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 145 (264)
+.+..+.++|.++|+|.||.++..+++.++.+ |++++++.+...+..............+..+...+
T Consensus 174 v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma 253 (445)
T COG3243 174 VKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMA 253 (445)
T ss_pred HHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHH
Confidence 66777889999999999999999998888877 99999998876664433322222221122111111
Q ss_pred ------HhhhhhhhhhcccccCCCCChHHH--HHHHHhhcccCchhhhhhhhhhcCC-----------ccccccCCcccC
Q 024681 146 ------EANYEAWAYGYAPLAVGADVPAAV--REFSRTLFNMRPDISLFVSKTVFDT-----------DLRGILGLVRVP 206 (264)
Q Consensus 146 ------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~i~~P 206 (264)
+..---|. .+.+.......+-.. ..+...-.+.+......+.+.+... ...-.+.+|+||
T Consensus 254 ~~F~mLrpndliw~-~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~p 332 (445)
T COG3243 254 IVFFLLRPNDLIWN-YFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCP 332 (445)
T ss_pred HHHHhcCccccchH-HHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccc
Confidence 11100111 111111111111111 1111111122222222333222211 223457889999
Q ss_pred EEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 207 CVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 207 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
++.+.|++|.++|.+......+.+++.++++.. ++||....
T Consensus 333 vy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~-~sGHIa~v 373 (445)
T COG3243 333 VYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLS-RSGHIAGV 373 (445)
T ss_pred eEEEeecccccCCHHHHHHHHHhcCCceEEEEe-cCceEEEE
Confidence 999999999999999999999999985555555 49996444
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.4e-14 Score=106.62 Aligned_cols=106 Identities=19% Similarity=0.260 Sum_probs=80.5
Q ss_pred CCCceEEEecCCCCChhhHHHh------hhhc--CCceEEEecCCCCCCCCC----C---CCCCcccchHHHHHH-HHHH
Q 024681 15 TGDRILVLAHGFGTDQSAWQRI------LPYL--NHHRVIMFDLVCAGSVNP----D---YFDFRRYTTLDAYVD-DLLN 78 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~------~~~l--~g~~v~~~d~~g~G~s~~----~---~~~~~~~~~~~~~~~-~~~~ 78 (264)
..+|+|++.||+.+++..|-.. +-.| +||.|..-+.||...|.. . .....+++ +++++. |+-+
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS-~~Em~~yDLPA 149 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFS-WHEMGTYDLPA 149 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecc-hhhhhhcCHHH
Confidence 5678999999999999988533 2244 999999999999877743 1 11133444 666543 5555
Q ss_pred HHHH----hCCCeEEEEecChhHHHHHHHHHhCCC---ccceeEEecCCC
Q 024681 79 ILDT----LGVNRCAYVGHSVSAMIGLLASIRRPD---LFTKLILIGASP 121 (264)
Q Consensus 79 ~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~ 121 (264)
.++. .+.++++.+|||.|+.....++...|+ +|+..++++|+.
T Consensus 150 ~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 150 MIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 5554 467899999999999999999888875 799999999976
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-13 Score=113.09 Aligned_cols=213 Identities=10% Similarity=0.013 Sum_probs=117.1
Q ss_pred hhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC--------------------CCeEEEEecCh
Q 024681 38 PYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG--------------------VNRCAYVGHSV 95 (264)
Q Consensus 38 ~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~l~G~S~ 95 (264)
+.| +||.|+.+|.||+|.|+.... .+ ..+..+|..++++++. ..+|.++|.|+
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~---~~--~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPT---TG--DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCc---cC--CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 455 899999999999999976421 11 1445667777777764 35999999999
Q ss_pred hHHHHHHHHHhCCCccceeEEecCCCCCCCCC------CCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHH
Q 024681 96 SAMIGLLASIRRPDLFTKLILIGASPRFLNDE------DYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAV 169 (264)
Q Consensus 96 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
||.+++.+|...|+.++++|..++...+...- .....+.......+..... ... ....... ......
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~---~r~---~~~~~~~-~~~~~~ 420 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTY---SRN---LLAGDYL-RHNEAC 420 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhh---hcc---cCcchhh-cchHHH
Confidence 99999999999998999999988754321100 0000000000000000000 000 0000000 000111
Q ss_pred HHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---CceEEEecCCCCcc
Q 024681 170 REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTVELLKIEGHLP 246 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~ 246 (264)
+.....+..............+...+....+.++++|+|+++|..|..+++..+.++.+.+.. ..++.+.+ ++|..
T Consensus 421 ~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~ 499 (767)
T PRK05371 421 EKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVY 499 (767)
T ss_pred HHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccC
Confidence 111110000000000000011122344556788999999999999999998877777776642 25665554 78954
Q ss_pred cc-cChhcHHHHHHHHhc
Q 024681 247 HL-SAPAIVGPVIRRALS 263 (264)
Q Consensus 247 ~~-~~~~~~~~~i~~fl~ 263 (264)
.. ..+.++.+.+.+|+.
T Consensus 500 ~~~~~~~d~~e~~~~Wfd 517 (767)
T PRK05371 500 PNNWQSIDFRDTMNAWFT 517 (767)
T ss_pred CCchhHHHHHHHHHHHHH
Confidence 33 334566677777764
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.1e-13 Score=92.91 Aligned_cols=202 Identities=18% Similarity=0.184 Sum_probs=104.7
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCC-CCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEEE
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCA-GSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCAY 90 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 90 (264)
.++||+.+|++...+.|..++.+| .||+|+.+|...| |.|+.. ...++ +....+++..+++++ +..++.|
T Consensus 30 ~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~---I~eft-ms~g~~sL~~V~dwl~~~g~~~~GL 105 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD---INEFT-MSIGKASLLTVIDWLATRGIRRIGL 105 (294)
T ss_dssp S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-----------------HHHHHHHHHHHHHHHHHTT---EEE
T ss_pred CCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC---hhhcc-hHHhHHHHHHHHHHHHhcCCCcchh
Confidence 379999999999999999999999 9999999999877 888764 45564 888888888888877 6778999
Q ss_pred EecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhh-hhhhhhcccccCCCCChHHH
Q 024681 91 VGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANY-EAWAYGYAPLAVGADVPAAV 169 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (264)
+.-|+.|.+|+..|.+- .+.-+|...+... .+..+.+.+. .++ ..+........--....-..
T Consensus 106 IAaSLSaRIAy~Va~~i--~lsfLitaVGVVn-----------lr~TLe~al~---~Dyl~~~i~~lp~dldfeGh~l~~ 169 (294)
T PF02273_consen 106 IAASLSARIAYEVAADI--NLSFLITAVGVVN-----------LRDTLEKALG---YDYLQLPIEQLPEDLDFEGHNLGA 169 (294)
T ss_dssp EEETTHHHHHHHHTTTS----SEEEEES--S------------HHHHHHHHHS---S-GGGS-GGG--SEEEETTEEEEH
T ss_pred hhhhhhHHHHHHHhhcc--CcceEEEEeeeee-----------HHHHHHHHhc---cchhhcchhhCCCcccccccccch
Confidence 99999999999999854 3677776665322 1111111110 000 00100000000000000011
Q ss_pred HHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCCCccc
Q 024681 170 REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGHLPH 247 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~ 247 (264)
+.+........-... .+....++.+++|++.+++++|.++......++...+... ++++.++|++|.+.
T Consensus 170 ~vFv~dc~e~~w~~l---------~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 170 EVFVTDCFEHGWDDL---------DSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHHHHHHHTT-SSH---------HHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred HHHHHHHHHcCCccc---------hhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 112111111111111 1223456778999999999999999998888888866543 88999999999775
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-13 Score=122.26 Aligned_cols=99 Identities=15% Similarity=0.081 Sum_probs=85.8
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecC
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHS 94 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S 94 (264)
.|+++++||++++...|..+.+.| .++.|++++.+|++.+.. ..+ +++++++++.+.++.+.. .+++++|||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~-----~~~-~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQ-----TAT-SLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCC-----CCC-CHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 468999999999999999999999 999999999999986632 223 599999999999988754 489999999
Q ss_pred hhHHHHHHHHHh---CCCccceeEEecCCC
Q 024681 95 VSAMIGLLASIR---RPDLFTKLILIGASP 121 (264)
Q Consensus 95 ~Gg~~a~~~a~~---~p~~v~~~vl~~~~~ 121 (264)
+||.+|..+|.+ .++++..++++++.+
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999999985 578899999998743
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-13 Score=100.04 Aligned_cols=239 Identities=15% Similarity=0.110 Sum_probs=132.1
Q ss_pred CCceEEEecCCCCChhhHHH-h-hhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHH-------HHHHHH---HH
Q 024681 16 GDRILVLAHGFGTDQSAWQR-I-LPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYV-------DDLLNI---LD 81 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~-~-~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~-------~~~~~~---~~ 81 (264)
.+|.+|.++|.|.+....+. + +..| +|+..+.+..|-||...|.......+.+..++. .+...+ ++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 46888999999987655543 3 4555 999999999999998876433222222222222 222233 33
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC--CCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccc
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF--LNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPL 159 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
.-|..++.+.|.||||.+|...|...|..+..+-++++.... ....-.........+..-+. ...+..........
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~--~~~~~~~~~~~~~~ 248 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFE--DTVYEEEISDIPAQ 248 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhc--ccchhhhhcccccC
Confidence 337789999999999999999999999887777666654221 11111111112222211100 00000000000000
Q ss_pred cCCCCChHHHHHHHHhhcccCchhhhhhhhhhc-CCccccccCC-cccCEEEEecCCCCCcchhhHHHHHHHcCCCceEE
Q 024681 160 AVGADVPAAVREFSRTLFNMRPDISLFVSKTVF-DTDLRGILGL-VRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237 (264)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 237 (264)
.... .. ....-...+.+........+. ..+....... -.-.+.++.+++|.++|......+.+..|+ +++.
T Consensus 249 ~~~~----~~--~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPG-sEvR 321 (348)
T PF09752_consen 249 NKSL----PL--DSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPG-SEVR 321 (348)
T ss_pred cccc----cc--hhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCC-CeEE
Confidence 0000 00 000000000010000000000 0111111111 123478899999999999999999999999 8999
Q ss_pred EecCCCCc-ccccChhcHHHHHHHHhcC
Q 024681 238 LLKIEGHL-PHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 238 ~~~~~gH~-~~~~~~~~~~~~i~~fl~~ 264 (264)
.++ +||. .++-+.+.+.++|.+-+++
T Consensus 322 ~l~-gGHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 322 YLP-GGHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred Eec-CCcEEEeeechHHHHHHHHHHhhC
Confidence 998 5994 6666788899999887764
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-14 Score=83.92 Aligned_cols=72 Identities=24% Similarity=0.429 Sum_probs=59.8
Q ss_pred eeEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
+|+++.+.+ .+.+|+++||++.++..|..+++.| +||.|+++|+||||.|+.. .....+++++++|+..+++
T Consensus 3 ~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~---rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 3 KLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGK---RGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCc---ccccCCHHHHHHHHHHHhC
Confidence 466666654 2459999999999999999999999 9999999999999999753 2333469999999998864
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-12 Score=93.40 Aligned_cols=172 Identities=17% Similarity=0.184 Sum_probs=109.1
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH-Hh------CCC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD-TL------GVN 86 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~ 86 (264)
.=|+|||+||+......|..+.+++ .||.|+++|+...+..... ....+..+.++.+.+-++ .+ +..
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~----~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s 91 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDT----DEVASAAEVIDWLAKGLESKLPLGVKPDFS 91 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcc----hhHHHHHHHHHHHHhcchhhcccccccccc
Confidence 3489999999998888899999999 8999999996654332111 111112222222222111 11 345
Q ss_pred eEEEEecChhHHHHHHHHHhC-----CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC
Q 024681 87 RCAYVGHSVSAMIGLLASIRR-----PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
++.|.|||.||-+|..++..+ +.+++++++++|.........
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~--------------------------------- 138 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQ--------------------------------- 138 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccC---------------------------------
Confidence 899999999999999999887 568999999999632110000
Q ss_pred CCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCC---------Ccch-hhHHHHHHHcC
Q 024681 162 GADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDV---------SVPV-SVAEYLQRHLG 231 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~---------~~~~-~~~~~~~~~~~ 231 (264)
..+... .....--+.+.|+++|..+.+. ..|. ...+++.+..+
T Consensus 139 -----------------~~P~v~----------~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~ 191 (259)
T PF12740_consen 139 -----------------TEPPVL----------TYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECK 191 (259)
T ss_pred -----------------CCCccc----------cCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcC
Confidence 000000 0001112246899999776663 3332 34677888777
Q ss_pred CCceEEEecCCCCcccccCh
Q 024681 232 GRNTVELLKIEGHLPHLSAP 251 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~ 251 (264)
..+-..+..+.||+-+++..
T Consensus 192 ~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 192 PPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCEEEEEeCCCCchHhhcCC
Confidence 65667778889998777665
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2e-12 Score=83.53 Aligned_cols=183 Identities=14% Similarity=0.088 Sum_probs=120.9
Q ss_pred EEeCCCCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCCCCCCC-----CCCCCCCcccchHHHHHHHHHHHHH
Q 024681 11 RVVGTGDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLVCAGSV-----NPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 11 ~~~g~~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s-----~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
...|+..-+||+.||.+.+. .....++..| +|+.|..++++..-.. .++ +..-+-...+...+.++..
T Consensus 8 ~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp---~~~~t~~~~~~~~~aql~~ 84 (213)
T COG3571 8 DPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPP---PGSGTLNPEYIVAIAQLRA 84 (213)
T ss_pred CCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCc---CccccCCHHHHHHHHHHHh
Confidence 33455445899999988765 4567788888 9999999998754222 221 1111224566677777777
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
.+.-.+.++-|+||||.++.+++......|+++++++-+......+
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP---------------------------------- 130 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP---------------------------------- 130 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc----------------------------------
Confidence 7766799999999999999998887666699999998532111000
Q ss_pred CCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecC
Q 024681 162 GADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (264)
+ .-..+.+..+++|++|.+|+.|.+-..+..... .+....+++.+++
T Consensus 131 -----e--------------------------~~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~wl~~ 177 (213)
T COG3571 131 -----E--------------------------QLRTEHLTGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVWLED 177 (213)
T ss_pred -----c--------------------------cchhhhccCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEEecc
Confidence 0 000123566799999999999998876655222 2333389999999
Q ss_pred CCCcccccC----------hhcHHHHHHHHhc
Q 024681 242 EGHLPHLSA----------PAIVGPVIRRALS 263 (264)
Q Consensus 242 ~gH~~~~~~----------~~~~~~~i~~fl~ 263 (264)
+.|.+--.+ -...++.|..|++
T Consensus 178 adHDLkp~k~vsgls~~~hL~~~A~~va~~~~ 209 (213)
T COG3571 178 ADHDLKPRKLVSGLSTADHLKTLAEQVAGWAR 209 (213)
T ss_pred CccccccccccccccHHHHHHHHHHHHHHHHh
Confidence 999643222 2344556666654
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.4e-12 Score=84.87 Aligned_cols=170 Identities=16% Similarity=0.159 Sum_probs=112.5
Q ss_pred ceEEEecCCCCCh-hhHHHhhh-hcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecCh
Q 024681 18 RILVLAHGFGTDQ-SAWQRILP-YLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSV 95 (264)
Q Consensus 18 p~vv~~hG~~~~~-~~~~~~~~-~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 95 (264)
+.+|++||+.++. ..|+...+ .|.. +-.+++. + ...- ..+++++.+.+.++.. .++++||+||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~--a~rveq~-----~-----w~~P-~~~dWi~~l~~~v~a~-~~~~vlVAHSL 68 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN--ARRVEQD-----D-----WEAP-VLDDWIARLEKEVNAA-EGPVVLVAHSL 68 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc--chhcccC-----C-----CCCC-CHHHHHHHHHHHHhcc-CCCeEEEEecc
Confidence 4789999988765 45654433 3322 2222221 1 1111 4889999998888887 46799999999
Q ss_pred hHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHh
Q 024681 96 SAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRT 175 (264)
Q Consensus 96 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (264)
|+.++++++.+...+|.++.+++|+-...... ....
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~~~~~--------------------------------------------~~~~ 104 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVSRPEI--------------------------------------------RPKH 104 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCcccccc--------------------------------------------chhh
Confidence 99999999998877999999999852210000 0000
Q ss_pred hcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccccc---Chh
Q 024681 176 LFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS---APA 252 (264)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~ 252 (264)
.... +. ....+..-|.+++...+|++++.+.++.+++.+.+ .++.+..+||+--.+ .-.
T Consensus 105 ~~tf---------------~~-~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN~~sG~g~wp 166 (181)
T COG3545 105 LMTF---------------DP-IPREPLPFPSVVVASRNDPYVSYEHAEDLANAWGS--ALVDVGEGGHINAESGFGPWP 166 (181)
T ss_pred cccc---------------CC-CccccCCCceeEEEecCCCCCCHHHHHHHHHhccH--hheecccccccchhhcCCCcH
Confidence 0000 00 01123456999999999999999999999999985 788888899964332 234
Q ss_pred cHHHHHHHHhc
Q 024681 253 IVGPVIRRALS 263 (264)
Q Consensus 253 ~~~~~i~~fl~ 263 (264)
+....+.+|+.
T Consensus 167 eg~~~l~~~~s 177 (181)
T COG3545 167 EGYALLAQLLS 177 (181)
T ss_pred HHHHHHHHHhh
Confidence 45566666553
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5e-12 Score=90.84 Aligned_cols=99 Identities=15% Similarity=0.165 Sum_probs=84.5
Q ss_pred ceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecCh
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHSV 95 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~ 95 (264)
|+|+++|+.++....|..++..| ....|+..+.||++.-... ..+++++++...+.|..... .+++|+|||+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~------~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQP------FASLDDMAAAYVAAIRRVQPEGPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccc------cCCHHHHHHHHHHHHHHhCCCCCEEEEeecc
Confidence 58999999999999999999999 8899999999999853221 11699999998888888754 5999999999
Q ss_pred hHHHHHHHHHh---CCCccceeEEecCCCC
Q 024681 96 SAMIGLLASIR---RPDLFTKLILIGASPR 122 (264)
Q Consensus 96 Gg~~a~~~a~~---~p~~v~~~vl~~~~~~ 122 (264)
||.+|..+|.+ ..+.|..++++++.+.
T Consensus 75 GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999876 3457999999998765
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.6e-13 Score=94.84 Aligned_cols=166 Identities=18% Similarity=0.197 Sum_probs=88.4
Q ss_pred CCceEEEecCCCCChhhHHHhhhh----c-C-CceEEEecCCCCC-----CCC-------------C--CCCC----Ccc
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPY----L-N-HHRVIMFDLVCAG-----SVN-------------P--DYFD----FRR 65 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~----l-~-g~~v~~~d~~g~G-----~s~-------------~--~~~~----~~~ 65 (264)
.++.|||+||++.++..++..... | + ++..+.+|-|--- -.. + .... ...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 457899999999999999765554 4 5 8888888865221 110 0 0000 112
Q ss_pred cchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhC--------CCccceeEEecCCCCCCCCCCCCCCccHHH
Q 024681 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRR--------PDLFTKLILIGASPRFLNDEDYHGGFEEAE 137 (264)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 137 (264)
+..+++..+.+.+.++..+. =..|+|+|.||.+|..++... ...++.+|++++.......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~----------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD----------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE------------
T ss_pred ccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-----------
Confidence 44567777777777777652 356999999999998877532 1247888888874321000
Q ss_pred HHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCC
Q 024681 138 IDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVS 217 (264)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 217 (264)
. ...+ .-.+|++|+|.|+|++|.+
T Consensus 151 --------------------------------------------------~----~~~~--~~~~i~iPtlHv~G~~D~~ 174 (212)
T PF03959_consen 151 --------------------------------------------------Y----QELY--DEPKISIPTLHVIGENDPV 174 (212)
T ss_dssp --------------------------------------------------G----TTTT----TT---EEEEEEETT-SS
T ss_pred --------------------------------------------------h----hhhh--ccccCCCCeEEEEeCCCCC
Confidence 0 0000 2345799999999999999
Q ss_pred cchhhHHHHHHHcCCCceEEEecCCCCcccccC
Q 024681 218 VPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSA 250 (264)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 250 (264)
++++.++.+.+.+.+..+++..+ +||.++...
T Consensus 175 ~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~ 206 (212)
T PF03959_consen 175 VPPERSEALAEMFDPDARVIEHD-GGHHVPRKK 206 (212)
T ss_dssp S-HHHHHHHHHHHHHHEEEEEES-SSSS----H
T ss_pred cchHHHHHHHHhccCCcEEEEEC-CCCcCcCCh
Confidence 99999999999887633444555 899887654
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.3e-11 Score=87.80 Aligned_cols=203 Identities=14% Similarity=0.122 Sum_probs=115.6
Q ss_pred CceEEEecCCCCChhhHHHhhhhc---CCc----eEEEecCCCC----CCCCCCCCC-------Cccc-chHHHHHHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL---NHH----RVIMFDLVCA----GSVNPDYFD-------FRRY-TTLDAYVDDLL 77 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l---~g~----~v~~~d~~g~----G~s~~~~~~-------~~~~-~~~~~~~~~~~ 77 (264)
..|.||+||++++...+..++..+ .+. -++.++--|. |.=...... ..+. .+....++.+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 358999999999999998888777 222 2334443332 221110000 0122 25777888888
Q ss_pred HHHHHh----CCCeEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh
Q 024681 78 NILDTL----GVNRCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN 148 (264)
Q Consensus 78 ~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
.++..| +.+++.+|||||||..++.++..+.. ++.++|.++++.............
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~--------------- 155 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQ--------------- 155 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTT---------------
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchh---------------
Confidence 888777 67899999999999999999887532 589999999864322111100000
Q ss_pred hhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecC------CCCCcchhh
Q 024681 149 YEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTS------KDVSVPVSV 222 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~------~D~~~~~~~ 222 (264)
..+...- ........+.+.... +..++ -++.+|-|.|. .|..||...
T Consensus 156 -----~~~~~~g-p~~~~~~y~~l~~~~--------------------~~~~p-~~i~VLnI~G~~~~g~~sDG~V~~~S 208 (255)
T PF06028_consen 156 -----NDLNKNG-PKSMTPMYQDLLKNR--------------------RKNFP-KNIQVLNIYGDLEDGSNSDGIVPNAS 208 (255)
T ss_dssp -----T-CSTT--BSS--HHHHHHHHTH--------------------GGGST-TT-EEEEEEEESBTTCSBTSSSBHHH
T ss_pred -----hhhcccC-CcccCHHHHHHHHHH--------------------HhhCC-CCeEEEEEecccCCCCCCCeEEeHHH
Confidence 0000000 000011111111110 00011 15689999998 789999998
Q ss_pred HHHHHHHcCCC---ceEEEecC--CCCcccccChhcHHHHHHHHh
Q 024681 223 AEYLQRHLGGR---NTVELLKI--EGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 223 ~~~~~~~~~~~---~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl 262 (264)
+..+...+.+. .+-.++.| +.|.-..|++ +|.+.|.+||
T Consensus 209 s~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FL 252 (255)
T PF06028_consen 209 SLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFL 252 (255)
T ss_dssp HCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHH
T ss_pred HHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHh
Confidence 88888887653 44555654 6898877776 5779999997
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.2e-12 Score=92.39 Aligned_cols=95 Identities=20% Similarity=0.216 Sum_probs=60.2
Q ss_pred EEEecCCCC---ChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-----hCCCeE
Q 024681 20 LVLAHGFGT---DQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT-----LGVNRC 88 (264)
Q Consensus 20 vv~~hG~~~---~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 88 (264)
||++||.+. +......++..+ .|+.|+.+|+|-..+..-+ ..+++..+.+..+++. .+.+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p-------~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFP-------AALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTT-------HHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccccc-------ccccccccceeeeccccccccccccce
Confidence 799999664 334445556555 6999999999954332111 1244444444455554 344699
Q ss_pred EEEecChhHHHHHHHHHhCCC----ccceeEEecCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRPD----LFTKLILIGASP 121 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~ 121 (264)
+++|+|.||.+|+.++.+..+ .+++++++.|..
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 999999999999998875432 489999999853
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.6e-11 Score=84.05 Aligned_cols=176 Identities=18% Similarity=0.185 Sum_probs=112.4
Q ss_pred CCceEEEecCCCCChhhHHH----hhhhc-CCceEEEecCCC------C---CCC----CCC-------------CCCCc
Q 024681 16 GDRILVLAHGFGTDQSAWQR----ILPYL-NHHRVIMFDLVC------A---GSV----NPD-------------YFDFR 64 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~----~~~~l-~g~~v~~~d~~g------~---G~s----~~~-------------~~~~~ 64 (264)
.++-|+|+||+-.+...|.. +.+.+ +-+..+.+|-|- . ..+ .+. .....
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 35789999999999988864 33444 456777777662 1 110 000 00122
Q ss_pred ccchHHHHHHHHHHHHHHhCCCeE-EEEecChhHHHHHHHHHhCC------C--ccceeEEecCCCCCCCCCCCCCCccH
Q 024681 65 RYTTLDAYVDDLLNILDTLGVNRC-AYVGHSVSAMIGLLASIRRP------D--LFTKLILIGASPRFLNDEDYHGGFEE 135 (264)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p------~--~v~~~vl~~~~~~~~~~~~~~~~~~~ 135 (264)
.|..++...+.+...+++.| |+ .|+|.|.|+.++..++.... + .++-+|++++......
T Consensus 84 ~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~---------- 151 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSK---------- 151 (230)
T ss_pred cccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcc----------
Confidence 33345666667777777665 44 59999999999988887211 1 2567777776321000
Q ss_pred HHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCC
Q 024681 136 AEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKD 215 (264)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 215 (264)
.. +.....+.+++|.|.|.|+.|
T Consensus 152 --------------------------------~~-------------------------~~~~~~~~i~~PSLHi~G~~D 174 (230)
T KOG2551|consen 152 --------------------------------KL-------------------------DESAYKRPLSTPSLHIFGETD 174 (230)
T ss_pred --------------------------------hh-------------------------hhhhhccCCCCCeeEEecccc
Confidence 00 000113457999999999999
Q ss_pred CCcchhhHHHHHHHcCCCceEEEecCCCCcccccCh--hcHHHHHHHHh
Q 024681 216 VSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAP--AIVGPVIRRAL 262 (264)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl 262 (264)
.++|...++.+++.+++ ..+..-| +||+++..++ +.+.+.|..++
T Consensus 175 ~iv~~~~s~~L~~~~~~-a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 175 TIVPSERSEQLAESFKD-ATVLEHP-GGHIVPNKAKYKEKIADFIQSFL 221 (230)
T ss_pred eeecchHHHHHHHhcCC-CeEEecC-CCccCCCchHHHHHHHHHHHHHH
Confidence 99999999999999999 5555555 9999886654 44444444444
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-11 Score=83.09 Aligned_cols=199 Identities=15% Similarity=0.119 Sum_probs=117.6
Q ss_pred EEEeCC--CCceEEEecCCC----CChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 10 VRVVGT--GDRILVLAHGFG----TDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 10 ~~~~g~--~~p~vv~~hG~~----~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
+..+|+ ..|..||+||.- ....+...+-..+ .||+|..+++ +.+... ..--.++.+...-+.-+++.
T Consensus 58 VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~---htL~qt~~~~~~gv~filk~ 131 (270)
T KOG4627|consen 58 VDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQV---HTLEQTMTQFTHGVNFILKY 131 (270)
T ss_pred EEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCccc---ccHHHHHHHHHHHHHHHHHh
Confidence 345664 457999999932 2233444555566 9999999864 444321 00001244444444455555
Q ss_pred hC-CCeEEEEecChhHHHHHHHHHh-CCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccccc
Q 024681 83 LG-VNRCAYVGHSVSAMIGLLASIR-RPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA 160 (264)
Q Consensus 83 ~~-~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
.. .+.+.+-|||.|+.+|+.+..+ +..+|.+++++++.... .. +.. .. .....-
T Consensus 132 ~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l---------------~E----L~~-te----~g~dlg 187 (270)
T KOG4627|consen 132 TENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDL---------------RE----LSN-TE----SGNDLG 187 (270)
T ss_pred cccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhH---------------HH----HhC-Cc----cccccC
Confidence 43 3567777999999999876655 44589999988874220 00 000 00 000000
Q ss_pred CCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec
Q 024681 161 VGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240 (264)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (264)
+..+. . .. .......+..+++|++++.|++|.---.+..+.+...+.+ +++..++
T Consensus 188 Lt~~~---a-------e~--------------~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~-a~~~~f~ 242 (270)
T KOG4627|consen 188 LTERN---A-------ES--------------VSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK-ASFTLFK 242 (270)
T ss_pred cccch---h-------hh--------------cCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh-cceeecC
Confidence 00000 0 00 0001123456789999999999976667888889998888 8999999
Q ss_pred CCCCcccccCh----hcHHHHHHHHhc
Q 024681 241 IEGHLPHLSAP----AIVGPVIRRALS 263 (264)
Q Consensus 241 ~~gH~~~~~~~----~~~~~~i~~fl~ 263 (264)
+.+|+-..+.. ..+..++.+|+.
T Consensus 243 n~~hy~I~~~~~~~~s~~~~~~~~~~~ 269 (270)
T KOG4627|consen 243 NYDHYDIIEETAIDDSDVSRFLRNIEI 269 (270)
T ss_pred CcchhhHHHHhccccchHHHHHHHHhc
Confidence 99998655542 456666666653
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.9e-11 Score=95.50 Aligned_cols=104 Identities=18% Similarity=0.099 Sum_probs=73.7
Q ss_pred CCceEEEecCCCCChhhHHHhhh------------------hc-CCceEEEecCC-CCCCCCCCCCCCcccchHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP------------------YL-NHHRVIMFDLV-CAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~------------------~l-~g~~v~~~d~~-g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
..|+||+++|.++++..+-.+.+ .+ +..+++.+|.| |+|.|.....+ ...+.++.++|
T Consensus 76 ~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~--~~~~~~~~a~d 153 (462)
T PTZ00472 76 EAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKAD--YDHNESEVSED 153 (462)
T ss_pred CCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCC--CCCChHHHHHH
Confidence 45899999999998876533221 12 45789999985 88888543211 11246788888
Q ss_pred HHHHHHHh-------CCCeEEEEecChhHHHHHHHHHhC----------CCccceeEEecCCC
Q 024681 76 LLNILDTL-------GVNRCAYVGHSVSAMIGLLASIRR----------PDLFTKLILIGASP 121 (264)
Q Consensus 76 ~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~----------p~~v~~~vl~~~~~ 121 (264)
+.++++.. +..+++|+|||+||.++..+|.+. +-.++++++.++..
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 88888743 447999999999999987777652 12468888888753
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-10 Score=81.19 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=68.9
Q ss_pred CceEEEecCCCCChhhHHHhh--hhc---CCceEEEecCCCCCCCC--CCCC---CCcccchHHHHHHHHHHHHHHhCC-
Q 024681 17 DRILVLAHGFGTDQSAWQRIL--PYL---NHHRVIMFDLVCAGSVN--PDYF---DFRRYTTLDAYVDDLLNILDTLGV- 85 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~--~~l---~g~~v~~~d~~g~G~s~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~- 85 (264)
.|.||++||.+.+...+.... ..| .||.|+.++........ .... ......+...+++-+..+....++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 489999999999998776532 234 78999999864221110 0000 001111122233333334444444
Q ss_pred -CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 86 -NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 86 -~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
++|++.|+|.||.++..++..+|+.+.++..+++.+
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 589999999999999999999999999998888754
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2e-10 Score=79.93 Aligned_cols=243 Identities=9% Similarity=0.006 Sum_probs=135.0
Q ss_pred eCCCCceEEEecCCCCChhhHHHhhhhc-----CCceEEEecCCCCCCCC---C---CCCCCcccchHHHHHHHHHHHHH
Q 024681 13 VGTGDRILVLAHGFGTDQSAWQRILPYL-----NHHRVIMFDLVCAGSVN---P---DYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 13 ~g~~~p~vv~~hG~~~~~~~~~~~~~~l-----~g~~v~~~d~~g~G~s~---~---~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+..++.+++++|.++....|.++++.| +.+.++++-..||-.-. . .....+.+ ++++.++.=.++++
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eif-sL~~QV~HKlaFik 103 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIF-SLQDQVDHKLAFIK 103 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccccccccccc-chhhHHHHHHHHHH
Confidence 4456789999999999999999999877 34668998888885443 1 11112334 48888888888887
Q ss_pred HhC--CCeEEEEecChhHHHHHHHHHhCC--CccceeEEecCCCCCCCCCC--CCCCccH---HHHHHH-----HHHHHh
Q 024681 82 TLG--VNRCAYVGHSVSAMIGLLASIRRP--DLFTKLILIGASPRFLNDED--YHGGFEE---AEIDKV-----FRAMEA 147 (264)
Q Consensus 82 ~~~--~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~~~~~--~~~~~~~---~~~~~~-----~~~~~~ 147 (264)
..- ..+++++|||.|+++.+.+..... -.|.+++++=|...-...+. +...... .....+ ......
T Consensus 104 ~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~ 183 (301)
T KOG3975|consen 104 EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPG 183 (301)
T ss_pred HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChH
Confidence 763 358999999999999998876432 25777777766421110000 0000000 000000 000000
Q ss_pred hhhhhhhhcccccCCCCChHHHH--------HHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcc
Q 024681 148 NYEAWAYGYAPLAVGADVPAAVR--------EFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVP 219 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 219 (264)
..+.++-.+.- .......+... ...+.......+....... ...+.+++-.+-+.+.+|..|.++|
T Consensus 184 ~ir~~Li~~~l-~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~-----~d~e~~een~d~l~Fyygt~DgW~p 257 (301)
T KOG3975|consen 184 FIRFILIKFML-CGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTT-----RDIEYCEENLDSLWFYYGTNDGWVP 257 (301)
T ss_pred HHHHHHHHHhc-ccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHH-----hHHHHHHhcCcEEEEEccCCCCCcc
Confidence 00000000000 00000001110 0011111011110000000 0112223334567899999999999
Q ss_pred hhhHHHHHHHcCCC-ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 220 VSVAEYLQRHLGGR-NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 220 ~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+....+.+.+|.. .++-+ ++..|.+...+.+..+..+.+.++
T Consensus 258 ~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 258 SHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred hHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhhC
Confidence 99999999999973 33333 679999988888888888877653
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.7e-12 Score=85.89 Aligned_cols=172 Identities=15% Similarity=0.094 Sum_probs=114.4
Q ss_pred ceEEEecCCCC-ChhhHHHhhhhc--CCceEEEecCC-CCCCCCCCC-CCCcc---cchHHHHHHHHHHHHHHh---C-C
Q 024681 18 RILVLAHGFGT-DQSAWQRILPYL--NHHRVIMFDLV-CAGSVNPDY-FDFRR---YTTLDAYVDDLLNILDTL---G-V 85 (264)
Q Consensus 18 p~vv~~hG~~~-~~~~~~~~~~~l--~g~~v~~~d~~-g~G~s~~~~-~~~~~---~~~~~~~~~~~~~~~~~~---~-~ 85 (264)
..||++--+.+ ....-+..+..+ .||.|+.+|+. |--.|.... ..... -.+....-.++..+++.+ + .
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 36777776444 444467778877 99999999984 311121100 00000 012334445666666555 4 4
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
+++.++|.||||.++..+....| .+.+.+.+-|+..
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~------------------------------------------- 155 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV------------------------------------------- 155 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC-------------------------------------------
Confidence 68999999999999998888877 6888887776421
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC----ceEEEecC
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR----NTVELLKI 241 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~ 241 (264)
+ .....++++|++++.|+.|.++|++....+.+.+.+. .++.++++
T Consensus 156 -----------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g 205 (242)
T KOG3043|consen 156 -----------------------------D-SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSG 205 (242)
T ss_pred -----------------------------C-hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCC
Confidence 0 1234567899999999999999999999888888654 36899999
Q ss_pred CCCcccc-----cCh------hcHHHHHHHHhc
Q 024681 242 EGHLPHL-----SAP------AIVGPVIRRALS 263 (264)
Q Consensus 242 ~gH~~~~-----~~~------~~~~~~i~~fl~ 263 (264)
.+|-+.. +.| ++..+.+.+|+.
T Consensus 206 ~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 206 VGHGFVARRANISSPEDKKAAEEAYQRFISWFK 238 (242)
T ss_pred ccchhhhhccCCCChhHHHHHHHHHHHHHHHHH
Confidence 9995552 233 445555556654
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.7e-12 Score=89.16 Aligned_cols=137 Identities=17% Similarity=0.192 Sum_probs=63.9
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
++|.|+|.|.||-+|+.+|..+| .|+++|.++|+.............. ...................
T Consensus 22 ~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~------------~~lp~~~~~~~~~~~~~~~ 88 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS------------KPLPYLPFDISKFSWNEPG 88 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--------------EE----B-GGG-EE-TTS
T ss_pred CCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC------------ccCCcCCcChhhceecCCc
Confidence 68999999999999999999999 7999999998754322211111110 0000000000000000000
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHHHHcCC-----CceEEEe
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQRHLGG-----RNTVELL 239 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~-----~~~~~~~ 239 (264)
.. ..................-.+.++++|+|+|.|++|.+.|... ++.+.+++.. ..++..+
T Consensus 89 ----------~~--~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y 156 (213)
T PF08840_consen 89 ----------LL--RSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSY 156 (213)
T ss_dssp -----------E--E-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEE
T ss_pred ----------ce--ehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEc
Confidence 00 0000000000000111122367789999999999999998544 4445544432 1678889
Q ss_pred cCCCCccc
Q 024681 240 KIEGHLPH 247 (264)
Q Consensus 240 ~~~gH~~~ 247 (264)
+++||++.
T Consensus 157 ~~aGH~i~ 164 (213)
T PF08840_consen 157 PGAGHLIE 164 (213)
T ss_dssp TTB-S---
T ss_pred CCCCceec
Confidence 99999753
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.35 E-value=2e-11 Score=93.89 Aligned_cols=103 Identities=20% Similarity=0.350 Sum_probs=58.5
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCC------CC-----C-----CCC-----C------cccc
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSV------NP-----D-----YFD-----F------RRYT 67 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s------~~-----~-----~~~-----~------~~~~ 67 (264)
-|+|||-||++++...|..++..| +||-|+++|+|..-.+ +. . ..+ . ..+.
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 389999999999999999999999 9999999999953111 00 0 000 0 0000
Q ss_pred ----hHHHHHHHHHHHHHHh--------------------------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEe
Q 024681 68 ----TLDAYVDDLLNILDTL--------------------------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI 117 (264)
Q Consensus 68 ----~~~~~~~~~~~~~~~~--------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 117 (264)
.++.-++++..+++.+ +.+++.++|||+||..++..+.+. .++++.|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 1112223333333222 134799999999999999888776 579999999
Q ss_pred cCC
Q 024681 118 GAS 120 (264)
Q Consensus 118 ~~~ 120 (264)
++.
T Consensus 259 D~W 261 (379)
T PF03403_consen 259 DPW 261 (379)
T ss_dssp S--
T ss_pred CCc
Confidence 983
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.5e-11 Score=82.87 Aligned_cols=101 Identities=19% Similarity=0.263 Sum_probs=70.7
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-------CCCeE
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-------GVNRC 88 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 88 (264)
|+|+|+||+......|..+...+ .||-|+++++-.. ..+. ..+...+....++.+..-++.+ +..++
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~~p~--~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kl 122 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL--FPPD--GQDEIKSAASVINWLPEGLQHVLPENVEANLSKL 122 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc--cCCC--chHHHHHHHHHHHHHHhhhhhhCCCCcccccceE
Confidence 79999999999999999999999 9999999998642 1111 0111111222333333333222 34689
Q ss_pred EEEecChhHHHHHHHHHhCC--CccceeEEecCCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRP--DLFTKLILIGASPR 122 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~ 122 (264)
.++|||.||-.|.++|..+. -.++++|.++|...
T Consensus 123 al~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 123 ALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred EEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 99999999999999998763 25788999998643
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.1e-11 Score=87.17 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=67.0
Q ss_pred CceEEEecCCCCChhhHHHhhhhc----------CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL----------NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL--- 83 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l----------~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 83 (264)
+.+|||+||.+++...++.+...+ ..++++++|+......-.. ..-....+...+.+..+++..
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g---~~l~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG---RTLQRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccc---ccHHHHHHHHHHHHHHHHHhhhhc
Confidence 468999999999988887765433 3688999998764322110 000001222233333444444
Q ss_pred --CCCeEEEEecChhHHHHHHHHHhCC---CccceeEEecCCC
Q 024681 84 --GVNRCAYVGHSVSAMIGLLASIRRP---DLFTKLILIGASP 121 (264)
Q Consensus 84 --~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~ 121 (264)
+.+++++|||||||.+|..++...+ +.|+.+|.++++.
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 4579999999999999988776543 5799999999864
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.7e-11 Score=99.95 Aligned_cols=199 Identities=15% Similarity=0.116 Sum_probs=124.9
Q ss_pred ceEEEecCCCCChhhH----HHhhhhc---CCceEEEecCCCCCCCCCCC-----CCCcccchHHHHHHHHHHHHHHh--
Q 024681 18 RILVLAHGFGTDQSAW----QRILPYL---NHHRVIMFDLVCAGSVNPDY-----FDFRRYTTLDAYVDDLLNILDTL-- 83 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~----~~~~~~l---~g~~v~~~d~~g~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-- 83 (264)
|.+|.+||.+++.... ..+...+ .|+.|+.+|.||.|.....- .+.+.. ...+....+..+++..
T Consensus 527 Pllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~~i 605 (755)
T KOG2100|consen 527 PLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDV-EVKDQIEAVKKVLKLPFI 605 (755)
T ss_pred CEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCc-chHHHHHHHHHHHhcccc
Confidence 7889999988743321 1222223 89999999999988764320 111222 2566666666666554
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCC-ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPD-LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
+.+++.++|+|+||.+++.++...|+ .+++.+.++|...+.-..... ....++
T Consensus 606 D~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~--------------------------terymg 659 (755)
T KOG2100|consen 606 DRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTY--------------------------TERYMG 659 (755)
T ss_pred cHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccc--------------------------cHhhcC
Confidence 34589999999999999999999984 456669999865432110000 000000
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCE-EEEecCCCCCcchhhHHHHHHHcCCC---ceEEE
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPC-VIIQTSKDVSVPVSVAEYLQRHLGGR---NTVEL 238 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~ 238 (264)
.. ...... .........+..++.|. |++||+.|..++.+.+..+.+.+... .++.+
T Consensus 660 ~p----------------~~~~~~----y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~v 719 (755)
T KOG2100|consen 660 LP----------------SENDKG----YEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLV 719 (755)
T ss_pred CC----------------ccccch----hhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEE
Confidence 00 000000 00112223344555565 99999999999999888888877543 78899
Q ss_pred ecCCCCcccccCh-hcHHHHHHHHhc
Q 024681 239 LKIEGHLPHLSAP-AIVGPVIRRALS 263 (264)
Q Consensus 239 ~~~~gH~~~~~~~-~~~~~~i~~fl~ 263 (264)
+|+.+|.+..-.. ..+...+..|+.
T Consensus 720 ypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 720 YPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred eCCCCcccccccchHHHHHHHHHHHH
Confidence 9999998775443 667777777764
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.1e-11 Score=81.52 Aligned_cols=94 Identities=21% Similarity=0.184 Sum_probs=73.8
Q ss_pred eEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCeEEEEe
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNRCAYVG 92 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G 92 (264)
.+|++-|=++-...=..++..| +|+.|+.+|-+-|=.+.+ +.++.+.|+..+++.. +.++++|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r---------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiG 74 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER---------TPEQTAADLARIIRHYRARWGRKRVVLIG 74 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC---------CHHHHHHHHHHHHHHHHHHhCCceEEEEe
Confidence 5788888666555556788888 999999999876655543 4677788877777654 678999999
Q ss_pred cChhHHHHHHHHHhCC----CccceeEEecCCC
Q 024681 93 HSVSAMIGLLASIRRP----DLFTKLILIGASP 121 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~ 121 (264)
+|+|+-+.-....+.| ++|+.++++++..
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 9999988888877777 4789999999863
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.3e-10 Score=85.38 Aligned_cols=100 Identities=19% Similarity=0.188 Sum_probs=67.2
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hC--
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LG-- 84 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 84 (264)
..|+||++||.+ ++......+...+ .|+.|+++|+|-..+-.-+ . .+++..+.+..+.+. ++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p----~---~~~d~~~a~~~l~~~~~~~g~d 150 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFP----A---ALEDAYAAYRWLRANAAELGID 150 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCC----c---hHHHHHHHHHHHHhhhHhhCCC
Confidence 358999999965 3445554555544 8999999999865443211 1 244444444344433 33
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCC----ccceeEEecCCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPD----LFTKLILIGASPR 122 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~ 122 (264)
.+++.++|+|.||.+++.++..-.+ ...+.+++.|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 4689999999999999988876443 4688888888644
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-09 Score=74.02 Aligned_cols=168 Identities=12% Similarity=0.120 Sum_probs=93.7
Q ss_pred EEEecCCCCChhh--HHH-hhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---C-CCeEEEE
Q 024681 20 LVLAHGFGTDQSA--WQR-ILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---G-VNRCAYV 91 (264)
Q Consensus 20 vv~~hG~~~~~~~--~~~-~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~l~ 91 (264)
|+++|||.++... ... ..+.+ .+++++ +++ .. ......+.+.+.+..+ + .+++.||
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~-----~~---------~P~~a~~~l~~~i~~~~~~~~~~~~~li 65 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS-----TL---------HPKHDMQHLLKEVDKMLQLSDDERPLIC 65 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC-----CC---------CHHHHHHHHHHHHHHhhhccCCCCcEEE
Confidence 7999999998877 422 22233 455554 332 00 1233333444444321 1 2579999
Q ss_pred ecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 92 GHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
|.|+||..|..+|.++. -..|+++|+... ...+. ..+.. +.... .....
T Consensus 66 GSSLGGyyA~~La~~~g---~~aVLiNPAv~P-----------~~~L~---~~ig~----------~~~y~----~~~~~ 114 (180)
T PRK04940 66 GVGLGGYWAERIGFLCG---IRQVIFNPNLFP-----------EENME---GKIDR----------PEEYA----DIATK 114 (180)
T ss_pred EeChHHHHHHHHHHHHC---CCEEEECCCCCh-----------HHHHH---HHhCC----------Ccchh----hhhHH
Confidence 99999999999999985 367889986431 00000 00000 00000 01111
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCc-eEEEecCCCCcccccC
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN-TVELLKIEGHLPHLSA 250 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~ 250 (264)
....+. .+-.-..+++..+.|.+.+...+.. .+.+ + +..+.+|+.|.+. +
T Consensus 115 h~~eL~-----------------------~~~p~r~~vllq~gDEvLDyr~a~~---~y~~-~y~~~v~~GGdH~f~--~ 165 (180)
T PRK04940 115 CVTNFR-----------------------EKNRDRCLVILSRNDEVLDSQRTAE---ELHP-YYEIVWDEEQTHKFK--N 165 (180)
T ss_pred HHHHhh-----------------------hcCcccEEEEEeCCCcccCHHHHHH---Hhcc-CceEEEECCCCCCCC--C
Confidence 111110 0112345899999999997655544 4444 4 6788998888653 4
Q ss_pred hhcHHHHHHHHhc
Q 024681 251 PAIVGPVIRRALS 263 (264)
Q Consensus 251 ~~~~~~~i~~fl~ 263 (264)
-++....|.+|+.
T Consensus 166 fe~~l~~I~~F~~ 178 (180)
T PRK04940 166 ISPHLQRIKAFKT 178 (180)
T ss_pred HHHHHHHHHHHHh
Confidence 4567777888764
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.1e-10 Score=80.12 Aligned_cols=94 Identities=19% Similarity=0.218 Sum_probs=71.1
Q ss_pred EecCCC--CChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-hCCCeEEEEecChhH
Q 024681 22 LAHGFG--TDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT-LGVNRCAYVGHSVSA 97 (264)
Q Consensus 22 ~~hG~~--~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~G~S~Gg 97 (264)
++|..+ ++...|..+...| ..+.++++|.+|++.+.... .+.+.+++.+...+.. ....+++++|||+||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg 75 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLP------ASADALVEAQAEAVLRAAGGRPFVLVGHSSGG 75 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCC------CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHH
Confidence 455544 6778899999999 88999999999998765431 1366666655544433 345789999999999
Q ss_pred HHHHHHHHh---CCCccceeEEecCCC
Q 024681 98 MIGLLASIR---RPDLFTKLILIGASP 121 (264)
Q Consensus 98 ~~a~~~a~~---~p~~v~~~vl~~~~~ 121 (264)
.++..++.+ .++.+.+++++++..
T Consensus 76 ~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 76 LLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 999888876 456789999888754
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.5e-09 Score=81.42 Aligned_cols=100 Identities=21% Similarity=0.117 Sum_probs=71.1
Q ss_pred CCceEEEecCCCC-----ChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-----
Q 024681 16 GDRILVLAHGFGT-----DQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT----- 82 (264)
Q Consensus 16 ~~p~vv~~hG~~~-----~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----- 82 (264)
..|.||++||.|. ....|..+...+ .+..|+++|+|=--+..- +.. .+|..+.+..+.+.
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~----Pa~---y~D~~~Al~w~~~~~~~~~ 161 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPF----PAA---YDDGWAALKWVLKNSWLKL 161 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCC----Ccc---chHHHHHHHHHHHhHHHHh
Confidence 3489999999663 356778888877 688999999985544432 233 44444444444442
Q ss_pred -hCCCeEEEEecChhHHHHHHHHHhC------CCccceeEEecCCCC
Q 024681 83 -LGVNRCAYVGHSVSAMIGLLASIRR------PDLFTKLILIGASPR 122 (264)
Q Consensus 83 -~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~ 122 (264)
.+.+++.|+|-|.||.+|..+|.+. +.++++.|++-|...
T Consensus 162 ~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 162 GADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred CCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 2557899999999999998887652 357999999998643
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.9e-11 Score=90.62 Aligned_cols=212 Identities=19% Similarity=0.166 Sum_probs=114.2
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCC--CCCCCCCCCCcccc--hHHHHHHHHHHHHHHh-------
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCA--GSVNPDYFDFRRYT--TLDAYVDDLLNILDTL------- 83 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~--G~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~------- 83 (264)
-|.|++-||.+.....|..+++.+ .||.|.++|.+|. |........+..|. -+.+...|+..+++.+
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 389999999999999999999999 8999999999984 43332111111111 1333444444444332
Q ss_pred ------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 84 ------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 84 ------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
+..+|.++|||+||+.++.++....+......-+........... ... .. .+......+..
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~---~~~---~~----~l~q~~av~~~--- 217 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPP---GLN---GR----LLNQCAAVWLP--- 217 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCC---CcC---hh----hhccccccccc---
Confidence 345899999999999999988765432111111110000000000 000 00 00000000000
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh-hHHHHHHHcCCC-ce
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYLQRHLGGR-NT 235 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~-~~ 235 (264)
.. ... ..+...+......+.... .+. ..-+.++++|++++.|..|.+.|.. .+......+++. ..
T Consensus 218 ~~--~~~---~rDpriravvA~~p~~~~-----~Fg---~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~ 284 (365)
T COG4188 218 RQ--AYD---LRDPRIRAVVAINPALGM-----IFG---TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKY 284 (365)
T ss_pred hh--hhc---cccccceeeeeccCCccc-----ccc---cccceeeecceeeecccccccCCcccccccccccCCcchhh
Confidence 00 000 000001111111111100 001 3446788999999999999987753 455566677773 36
Q ss_pred EEEecCCCCcccccChhcH
Q 024681 236 VELLKIEGHLPHLSAPAIV 254 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~~~~ 254 (264)
+..++++.|+-+.+-..+.
T Consensus 285 ~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 285 LRLVPGATHFSFLELCKEG 303 (365)
T ss_pred eeecCCCccccccccCccc
Confidence 7889999999888876653
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.3e-10 Score=77.19 Aligned_cols=175 Identities=19% Similarity=0.259 Sum_probs=111.6
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCC------CCCCC--------CcccchHHHHHHHHHHHHH
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVN------PDYFD--------FRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~------~~~~~--------~~~~~~~~~~~~~~~~~~~ 81 (264)
.+||++||.+.+...|..+++.| ++..-+++..|-.-.+. ...++ ..+..++...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 48999999999999998888878 77777777554321110 00000 0112235555666666666
Q ss_pred Hh---C--CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 82 TL---G--VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 82 ~~---~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
+. + .+++.+-|.|+||.+++..+..+|..+.+++...+..... ....+.|
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~---------------------~~~~~~~---- 138 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRA---------------------SIGLPGW---- 138 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccc---------------------hhhccCC----
Confidence 54 3 3578999999999999999999987777776665521100 0000000
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---C
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---R 233 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~ 233 (264)
....+ ..|++..||+.|+++|....+...+.+.. .
T Consensus 139 ----------------------------------------~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~ 176 (206)
T KOG2112|consen 139 ----------------------------------------LPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVR 176 (206)
T ss_pred ----------------------------------------ccccC--cchhheecccCCceeehHHHHHHHHHHHHcCCc
Confidence 00001 66999999999999997765555444432 2
Q ss_pred ceEEEecCCCCcccccChhcHHHHHH
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
+++..+++-+|...-+.-+++..+|.
T Consensus 177 ~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 177 VTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred eeeeecCCccccccHHHHHHHHHHHH
Confidence 78889999999876554454444443
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.3e-09 Score=79.54 Aligned_cols=80 Identities=18% Similarity=0.261 Sum_probs=59.4
Q ss_pred Hhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-----CCCeEEEEecChhHHHHHHHHHhCC
Q 024681 35 RILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-----GVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 35 ~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
.+...| .|+.||.+.+.- . +....++++.......+++.+ +..+.+|+|.|.||+.++.+|+.+|
T Consensus 92 evG~AL~~GHPvYFV~F~p----~-----P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 92 EVGVALRAGHPVYFVGFFP----E-----PEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred HHHHHHHcCCCeEEEEecC----C-----CCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCc
Confidence 455577 899998887641 1 122225888777777776665 2348999999999999999999999
Q ss_pred CccceeEEecCCCCC
Q 024681 109 DLFTKLILIGASPRF 123 (264)
Q Consensus 109 ~~v~~~vl~~~~~~~ 123 (264)
+.+.-+|+-+++..+
T Consensus 163 d~~gplvlaGaPlsy 177 (581)
T PF11339_consen 163 DLVGPLVLAGAPLSY 177 (581)
T ss_pred CccCceeecCCCccc
Confidence 998888888776443
|
Their function is unknown. |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.2e-09 Score=81.90 Aligned_cols=101 Identities=19% Similarity=0.140 Sum_probs=57.9
Q ss_pred ceEEEecCCCCChhhH------------------HHhhhhc--CCceEEEecCCCCCCCCCCCCCCc--cc--chHHH--
Q 024681 18 RILVLAHGFGTDQSAW------------------QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFR--RY--TTLDA-- 71 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~------------------~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~--~~--~~~~~-- 71 (264)
|.||++||-+++.+.. ..+...| +||.|+++|.+|+|+......... .+ ..+..
T Consensus 116 PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~ 195 (390)
T PF12715_consen 116 PAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNL 195 (390)
T ss_dssp EEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHH
T ss_pred CEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHH
Confidence 7999999977665331 1234456 899999999999999854321111 11 11111
Q ss_pred ----------HHHHHHHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 72 ----------YVDDLLNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 72 ----------~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
.+-|....++.+ +.++|.++|+||||..++.+|+.. ++|++.|..+-
T Consensus 196 l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 196 LMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 111223344554 335899999999999999999876 47988887764
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.8e-10 Score=87.74 Aligned_cols=219 Identities=13% Similarity=0.054 Sum_probs=131.6
Q ss_pred CCcceeeEEEEe----CCCCceEEEecCCCCChhh---HH--Hh--hhhc--CCceEEEecCCCCCCCCCC----CCCCc
Q 024681 2 GDLLEALHVRVV----GTGDRILVLAHGFGTDQSA---WQ--RI--LPYL--NHHRVIMFDLVCAGSVNPD----YFDFR 64 (264)
Q Consensus 2 g~~~~~~~~~~~----g~~~p~vv~~hG~~~~~~~---~~--~~--~~~l--~g~~v~~~d~~g~G~s~~~----~~~~~ 64 (264)
|.++-.+-|+.. |+.-|+++++-|.++-.-. |. .. ...| .||.|+.+|-||.-..... -....
T Consensus 623 g~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~km 702 (867)
T KOG2281|consen 623 GLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKM 702 (867)
T ss_pred CcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhcc
Confidence 334445555554 3344899999998864322 22 11 1234 8999999999997544321 00112
Q ss_pred ccchHHHHHHHHHHHHHHhC---CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHH
Q 024681 65 RYTTLDAYVDDLLNILDTLG---VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKV 141 (264)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (264)
.+..++|.++-+.-+.++.| .++|.+-|||+||++++....++|+.++..|.-+|...+..-
T Consensus 703 GqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~Y--------------- 767 (867)
T KOG2281|consen 703 GQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLY--------------- 767 (867)
T ss_pred CeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeee---------------
Confidence 33348888888888888774 479999999999999999999999988887776664332110
Q ss_pred HHHHHhhhhhhhhhcccccCCCC-ChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcch
Q 024681 142 FRAMEANYEAWAYGYAPLAVGAD-VPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV 220 (264)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 220 (264)
...+..+.++-. ..+. .......... .+.++.-....|++||--|.-+..
T Consensus 768 -----------DTgYTERYMg~P~~nE~---------gY~agSV~~~---------VeklpdepnRLlLvHGliDENVHF 818 (867)
T KOG2281|consen 768 -----------DTGYTERYMGYPDNNEH---------GYGAGSVAGH---------VEKLPDEPNRLLLVHGLIDENVHF 818 (867)
T ss_pred -----------cccchhhhcCCCccchh---------cccchhHHHH---------HhhCCCCCceEEEEecccccchhh
Confidence 000111111100 0000 0000000000 011222244589999999998887
Q ss_pred hhHHHHHHHcCC---CceEEEecCCCCccccc-ChhcHHHHHHHHhcC
Q 024681 221 SVAEYLQRHLGG---RNTVELLKIEGHLPHLS-APAIVGPVIRRALSR 264 (264)
Q Consensus 221 ~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 264 (264)
.....+...+-. .-++.++|+.-|.+-.. ...-.-..+..||++
T Consensus 819 ~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 819 AHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred hhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 666666555422 17899999999986543 345566778888764
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.8e-08 Score=73.20 Aligned_cols=85 Identities=19% Similarity=0.226 Sum_probs=63.0
Q ss_pred CCceEEEecCCCCChhhH-------HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---
Q 024681 16 GDRILVLAHGFGTDQSAW-------QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL--- 83 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~-------~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 83 (264)
....||+.-|.++.-+.. ..+.+.. .+-+|+.+++||.|.|.... +.++++.|-.+.++++
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-------s~~dLv~~~~a~v~yL~d~ 208 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-------SRKDLVKDYQACVRYLRDE 208 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-------CHHHHHHHHHHHHHHHHhc
Confidence 445999999988766551 1222222 68899999999999996542 3677788777777766
Q ss_pred --C--CCeEEEEecChhHHHHHHHHHhC
Q 024681 84 --G--VNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 84 --~--~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
| .+++++.|||+||.++..++.++
T Consensus 209 ~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 209 EQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ccCCChheEEEeeccccHHHHHHHHHhc
Confidence 2 26899999999999988866654
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.4e-11 Score=83.80 Aligned_cols=89 Identities=21% Similarity=0.245 Sum_probs=53.3
Q ss_pred ceEEEecCCCC-ChhhHHHhhhhc--CCce---EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 18 RILVLAHGFGT-DQSAWQRILPYL--NHHR---VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 18 p~vv~~hG~~~-~~~~~~~~~~~l--~g~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
.||||+||.++ ....|..+.+.| +||. ++++++-....+...........+..++.+-+.+++++.+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 37999999998 668999999999 9999 79999843332211000000111234555566666677788 99999
Q ss_pred ecChhHHHHHHHHHhC
Q 024681 92 GHSVSAMIGLLASIRR 107 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~ 107 (264)
||||||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999998887643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.09 E-value=5e-10 Score=87.34 Aligned_cols=90 Identities=14% Similarity=0.104 Sum_probs=67.6
Q ss_pred CChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 28 TDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 28 ~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.....|..+++.| .||.+ ..|++|+|.+.... ..... .++++.+.+.++.+..+.++++|+||||||.+++.++.
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~-~~~~~-~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS-NRLPE-TMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccc-ccHHH-HHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHH
Confidence 4567899999999 67655 89999999986531 11111 24555555566666667789999999999999999998
Q ss_pred hCCCc----cceeEEecCC
Q 024681 106 RRPDL----FTKLILIGAS 120 (264)
Q Consensus 106 ~~p~~----v~~~vl~~~~ 120 (264)
.+|+. |+++|.++++
T Consensus 182 ~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HCCHhHHhHhccEEEECCC
Confidence 88863 7889999875
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=99.08 E-value=4e-10 Score=85.01 Aligned_cols=101 Identities=18% Similarity=0.287 Sum_probs=63.9
Q ss_pred CCCceEEEecCCCCCh--hhH-HHhhhhc--C---CceEEEecCCCCCCCCCCCCCCcccc----hHHHHHHHHHHHHHH
Q 024681 15 TGDRILVLAHGFGTDQ--SAW-QRILPYL--N---HHRVIMFDLVCAGSVNPDYFDFRRYT----TLDAYVDDLLNILDT 82 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~--~~~-~~~~~~l--~---g~~v~~~d~~g~G~s~~~~~~~~~~~----~~~~~~~~~~~~~~~ 82 (264)
..+|++|++|||..+. ..| ..+.+.+ . +++|+++|+...-. ..|. ......+.+..+++.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~--------~~Y~~a~~n~~~vg~~la~~l~~ 140 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS--------NNYPQAVANTRLVGRQLAKFLSF 140 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS--------S-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc--------ccccchhhhHHHHHHHHHHHHHH
Confidence 3568999999999877 334 4455544 4 79999999953211 1121 233444444444444
Q ss_pred h------CCCeEEEEecChhHHHHHHHHHhCCC--ccceeEEecCCCCC
Q 024681 83 L------GVNRCAYVGHSVSAMIGLLASIRRPD--LFTKLILIGASPRF 123 (264)
Q Consensus 83 ~------~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~ 123 (264)
+ ..++++|||||+||.+|-.++..... ++.++..++|+...
T Consensus 141 L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 141 LINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp HHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred HHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 3 34699999999999999999998877 89999999997554
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.1e-09 Score=76.16 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=61.1
Q ss_pred ceEEEecCCCCChhhHH-Hhhh------hc---CCceEEEecCC-CCCCCCCCCCCCcccchHHHHHHHHH-HHHHHhCC
Q 024681 18 RILVLAHGFGTDQSAWQ-RILP------YL---NHHRVIMFDLV-CAGSVNPDYFDFRRYTTLDAYVDDLL-NILDTLGV 85 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~-~~~~------~l---~g~~v~~~d~~-g~G~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 85 (264)
|.+||+||.+..+..-. .+.. .. .++-|+++.+- =+-.++.. ...+ .....+-+. .+.++.++
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~---t~~~--l~~~idli~~vlas~ynI 266 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEK---TLLY--LIEKIDLILEVLASTYNI 266 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccc---cchh--HHHHHHHHHHHHhhccCc
Confidence 89999999887665433 2222 11 23345555421 11122211 1111 333444444 23344455
Q ss_pred --CeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 86 --NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 86 --~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.+++++|.|+||.-++.++.++|+.+.+.+++++.
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 48999999999999999999999999999999974
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.3e-08 Score=75.84 Aligned_cols=105 Identities=12% Similarity=0.022 Sum_probs=68.4
Q ss_pred CCceEEEecCCCCChhhHHHhhh-------------------hc-CCceEEEecCC-CCCCCCCCCCCCcccchHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP-------------------YL-NHHRVIMFDLV-CAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~-------------------~l-~g~~v~~~d~~-g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
..|+||++.|.++++..+..+.+ .+ +..+++.+|.| |.|.|....... ...+.++.++
T Consensus 39 ~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~-~~~~~~~~a~ 117 (415)
T PF00450_consen 39 DDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSD-YVWNDDQAAE 117 (415)
T ss_dssp SS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGG-GS-SHHHHHH
T ss_pred CccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeecccccc-ccchhhHHHH
Confidence 56899999999999887754432 11 35689999966 999995432111 2234788888
Q ss_pred HHHHHHHHh-------CCCeEEEEecChhHHHHHHHHHh----C------CCccceeEEecCCC
Q 024681 75 DLLNILDTL-------GVNRCAYVGHSVSAMIGLLASIR----R------PDLFTKLILIGASP 121 (264)
Q Consensus 75 ~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~v~~~vl~~~~~ 121 (264)
++..+++.. ...+++|.|-|+||..+-.+|.. . +-.++++++.++..
T Consensus 118 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 118 DLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred HHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 888777654 44699999999999877655543 3 33578999998854
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.9e-09 Score=77.72 Aligned_cols=60 Identities=18% Similarity=0.128 Sum_probs=42.1
Q ss_pred cccCEEEEecCCCCCcchhhHHHHHHHcC----CCceEEEecCCCCcccc-cChhcHHHHHHHHh
Q 024681 203 VRVPCVIIQTSKDVSVPVSVAEYLQRHLG----GRNTVELLKIEGHLPHL-SAPAIVGPVIRRAL 262 (264)
Q Consensus 203 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 262 (264)
.++|+++.+|..|.++|....+.+.+.+. ..+++..+++.+|.... .......++|.+-|
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRF 282 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHH
Confidence 47899999999999999988877766542 12778888999996432 23344445555433
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.4e-10 Score=81.28 Aligned_cols=114 Identities=14% Similarity=0.124 Sum_probs=76.1
Q ss_pred CCcceeeEEEEe----CCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHH
Q 024681 2 GDLLEALHVRVV----GTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDL 76 (264)
Q Consensus 2 g~~~~~~~~~~~----g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~ 76 (264)
|+.+..++.... |+++..|||+-|..+--+. --+..-+ .||.|+.+++||++.|...++... +....-.-+
T Consensus 224 gneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n---~~nA~DaVv 299 (517)
T KOG1553|consen 224 GNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVN---TLNAADAVV 299 (517)
T ss_pred CcchhheeecCCCCCCCCCceEEEEecCCccceEe-eeecChHHhCceeeccCCCCccccCCCCCccc---chHHHHHHH
Confidence 445555665544 3355688888875542110 1122334 799999999999999976533321 222222223
Q ss_pred HHHHHHhCC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 77 LNILDTLGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 77 ~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.-.++.++. +.++|.|||.||.-+..+|..+|+ |+++|+-++.
T Consensus 300 QfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 300 QFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 345566654 689999999999999999999997 9999988764
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.8e-08 Score=76.54 Aligned_cols=121 Identities=17% Similarity=0.151 Sum_probs=78.0
Q ss_pred CCcceeeEEEEeCC-CCceEEEecCCCCChh-----hHHHhhh---hc--CCceEEEecCCCCCCCCCCCCCCcccchHH
Q 024681 2 GDLLEALHVRVVGT-GDRILVLAHGFGTDQS-----AWQRILP---YL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLD 70 (264)
Q Consensus 2 g~~~~~~~~~~~g~-~~p~vv~~hG~~~~~~-----~~~~~~~---~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 70 (264)
|..+..-.|+..+. ..|+++..+-++-... .-....+ .+ +||.|+..|.||.|.|+.. ...+.+
T Consensus 29 GvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~---~~~~~~-- 103 (563)
T COG2936 29 GVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGV---FDPESS-- 103 (563)
T ss_pred CeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcc---cceecc--
Confidence 44444445555544 3477777772222211 1122233 45 9999999999999999764 222222
Q ss_pred HHHHHHHHHHHHh-----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC
Q 024681 71 AYVDDLLNILDTL-----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE 127 (264)
Q Consensus 71 ~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~ 127 (264)
+.++|-.++|+.+ ...+|..+|.|++|...+.+|+..|..+++++...+........
T Consensus 104 ~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d~ 165 (563)
T COG2936 104 REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRDD 165 (563)
T ss_pred ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccccccc
Confidence 2444444444444 23589999999999999999999998899998888765533333
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.2e-08 Score=72.15 Aligned_cols=120 Identities=16% Similarity=0.096 Sum_probs=82.7
Q ss_pred CCcceeeEEEEeCC--CCceEEEecCCCCChhhHHHhh--hhc---CCceEEEecCC-------CCCCCCCCCCCCcccc
Q 024681 2 GDLLEALHVRVVGT--GDRILVLAHGFGTDQSAWQRIL--PYL---NHHRVIMFDLV-------CAGSVNPDYFDFRRYT 67 (264)
Q Consensus 2 g~~~~~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~--~~l---~g~~v~~~d~~-------g~G~s~~~~~~~~~~~ 67 (264)
|.-.....|...+. +.|.||.+||-.++...+.... ..| .||-|+.+|-- +.+.+..+........
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~d 123 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVD 123 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCcc
Confidence 34444555555554 4579999999999988777665 455 79999999532 1222211111122223
Q ss_pred hHHHHHHHHHHHHHHhCCC--eEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 68 TLDAYVDDLLNILDTLGVN--RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+...+.+-+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 124 dVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 124 DVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 3555555566666666775 89999999999999999999999999999888754
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.7e-07 Score=65.92 Aligned_cols=102 Identities=18% Similarity=0.171 Sum_probs=70.5
Q ss_pred eEEEecCCCCChhhHHHhhhhc-CCc------eEEEecCCCC----CCCCCCCCCC-------cccchHHHHHHHHHHHH
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL-NHH------RVIMFDLVCA----GSVNPDYFDF-------RRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l-~g~------~v~~~d~~g~----G~s~~~~~~~-------~~~~~~~~~~~~~~~~~ 80 (264)
|.||+||.+++......++..| ..+ -++.+|--|. |.=+.....+ .+-.+..++...+..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 7899999999999999999888 444 3556666552 1111110000 01124556677777766
Q ss_pred HHh----CCCeEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCC
Q 024681 81 DTL----GVNRCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGAS 120 (264)
Q Consensus 81 ~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~ 120 (264)
..| +++++.++||||||.-...++..+.. .++.+|.++++
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 666 67899999999999999888876532 58899999875
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.9e-08 Score=70.96 Aligned_cols=84 Identities=13% Similarity=0.245 Sum_probs=49.6
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-C---CceEEEecCCCCCCCCCCCCCCcccchHHHH----HHHHHHHHHHhCC--C
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-N---HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAY----VDDLLNILDTLGV--N 86 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-~---g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~ 86 (264)
.-.||++||+.++...|..+...+ . .+.-..+...++...... .+.+++.. ++.+.+.++.... .
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~-----T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK-----TFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc-----cchhhHHHHHHHHHHHHHhccccccccc
Confidence 348999999999999998777766 3 332222222222111111 11124444 4444444444443 4
Q ss_pred eEEEEecChhHHHHHHHHH
Q 024681 87 RCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~ 105 (264)
++++|||||||.++-.+..
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 8999999999999865544
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.9e-08 Score=72.82 Aligned_cols=173 Identities=14% Similarity=0.128 Sum_probs=106.0
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCC-----C--CCC-Cccc-------------c----h
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNP-----D--YFD-FRRY-------------T----T 68 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~-----~--~~~-~~~~-------------~----~ 68 (264)
+=|+|||-||++++...|..+.-.| .||-|.+++.|-+-.+.. . ... ...+ . .
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 3389999999999999999999999 999999999987643310 0 000 0000 0 0
Q ss_pred HHHHHHHHH---HHHHHh------------------------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 69 LDAYVDDLL---NILDTL------------------------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 69 ~~~~~~~~~---~~~~~~------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
...-++.+. .+++.+ +-.++.++|||+||..++...+.+. .+++.|++++.-
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM 275 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeee
Confidence 111111111 222222 1126789999999999988777654 588888888620
Q ss_pred CCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccC
Q 024681 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILG 201 (264)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (264)
. .+. ....+
T Consensus 276 ~--------------------------------Pl~---------------------------------------~~~~~ 284 (399)
T KOG3847|consen 276 F--------------------------------PLD---------------------------------------QLQYS 284 (399)
T ss_pred c--------------------------------ccc---------------------------------------hhhhh
Confidence 0 000 01123
Q ss_pred CcccCEEEEecCCCCCcchhhHHHHHHHcCCC--ceEEEecCCCCcccccChhcHHHHHHHHh
Q 024681 202 LVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR--NTVELLKIEGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 202 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 262 (264)
+.+.|+++|.-+ .+--.+....+.+..++. ..+..+.|+=|..+-+-|=.+-..|.+++
T Consensus 285 ~arqP~~finv~--~fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f 345 (399)
T KOG3847|consen 285 QARQPTLFINVE--DFQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVF 345 (399)
T ss_pred hccCCeEEEEcc--cccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHh
Confidence 457799999833 233345555555555433 56778888889777666655555555554
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.1e-08 Score=72.21 Aligned_cols=102 Identities=24% Similarity=0.302 Sum_probs=65.8
Q ss_pred CCceEEEecCCCCChhhHHH----hhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCC
Q 024681 16 GDRILVLAHGFGTDQSAWQR----ILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVN 86 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~----~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 86 (264)
.+..+||+||+..+...-.. +...+ ....++.+.||..|.-.. +..... +...-..++..+++.+ +.+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~--Y~~d~~-~a~~s~~~l~~~L~~L~~~~~~~ 93 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLG--YFYDRE-SARFSGPALARFLRDLARAPGIK 93 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhh--hhhhhh-hHHHHHHHHHHHHHHHHhccCCc
Confidence 45699999999988654322 33333 233899999998876321 111111 2334444555555544 567
Q ss_pred eEEEEecChhHHHHHHHHHh----CC-----CccceeEEecCC
Q 024681 87 RCAYVGHSVSAMIGLLASIR----RP-----DLFTKLILIGAS 120 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~----~p-----~~v~~~vl~~~~ 120 (264)
+|++++||||+.+.+.+... .+ .++..+++++|-
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 99999999999998876543 21 267888999874
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.1e-08 Score=77.17 Aligned_cols=158 Identities=13% Similarity=0.086 Sum_probs=104.7
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc----CCceEEEecCCCC-CCCCCCCCCCcccchHHHHHHHHHHHHHH-----
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL----NHHRVIMFDLVCA-GSVNPDYFDFRRYTTLDAYVDDLLNILDT----- 82 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l----~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----- 82 (264)
..|.++++||.+ ..++.+..+...| +-..+-++|++.- |. . ++...++.+..+.+.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG----------~-nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG----------A-NIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC----------c-chHHHHHHHHHHhhhhhhhh
Confidence 347899999977 1222222333333 5566777887632 21 1 355556655555542
Q ss_pred ---hCCCeEEEEecChhHHHHHHHHHhCC-CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc
Q 024681 83 ---LGVNRCAYVGHSVSAMIGLLASIRRP-DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP 158 (264)
Q Consensus 83 ---~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
+...+++|+|.|||+.++.+.+.... ..|+++|+++-+........
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr------------------------------ 293 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR------------------------------ 293 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc------------------------------
Confidence 23458999999999999888776543 34888888875322110000
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEE
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 238 (264)
....+.+-.++.|+|++.|..|..++++..+.+++++....++++
T Consensus 294 -----------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhV 338 (784)
T KOG3253|consen 294 -----------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHV 338 (784)
T ss_pred -----------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEE
Confidence 011122344688999999999999999999999999987689999
Q ss_pred ecCCCCccccc
Q 024681 239 LKIEGHLPHLS 249 (264)
Q Consensus 239 ~~~~gH~~~~~ 249 (264)
+.+++|.+-..
T Consensus 339 I~~adhsmaip 349 (784)
T KOG3253|consen 339 IGGADHSMAIP 349 (784)
T ss_pred ecCCCccccCC
Confidence 99999965543
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.4e-07 Score=71.00 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=62.1
Q ss_pred CCceEEEecCCCCChh-hHHHhhhhc--CC----ceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-----
Q 024681 16 GDRILVLAHGFGTDQS-AWQRILPYL--NH----HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----- 83 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~-~~~~~~~~l--~g----~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 83 (264)
.-|+|+++||-..... .....+..| .| ..++.+|..+.. .......... .-...+++++.-.++..
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~-~R~~el~~~~-~f~~~l~~eLlP~I~~~y~~~~ 285 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT-HRSQELPCNA-DFWLAVQQELLPQVRAIAPFSD 285 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc-cccccCCchH-HHHHHHHHHHHHHHHHhCCCCC
Confidence 3489999999432111 111223333 33 456777753211 1111011111 11344556666666653
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
+.++.+|+|+||||..|+.++.++|+.+.+++.+++.
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 3357899999999999999999999999999999985
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.3e-07 Score=64.90 Aligned_cols=81 Identities=21% Similarity=0.307 Sum_probs=55.4
Q ss_pred CceEEEecCCCCChhhHHHhhhhcCCceE-EEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecCh
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYLNHHRV-IMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSV 95 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l~g~~v-~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 95 (264)
+..|||+.|+|.+...+..+... .++.+ +++|+|..- ++. | -.+.+++.|||+||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~~-~~~D~l~~yDYr~l~--------------~d~---~------~~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLILP-ENYDVLICYDYRDLD--------------FDF---D------LSGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhccCC-CCccEEEEecCcccc--------------ccc---c------cccCceEEEEEEeH
Confidence 45999999999999888766421 34444 567776221 110 1 12357999999999
Q ss_pred hHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 96 SAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 96 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
|-++|..+....| ++..|.+++.+..
T Consensus 67 GVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 67 GVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred HHHHHHHHhccCC--cceeEEEECCCCC
Confidence 9999988766543 6777888876543
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.9e-07 Score=65.21 Aligned_cols=228 Identities=16% Similarity=0.185 Sum_probs=117.6
Q ss_pred ceEEEecCCCCChhhHH-Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHH----HHHH---------
Q 024681 18 RILVLAHGFGTDQSAWQ-RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL----NILD--------- 81 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~-~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~----~~~~--------- 81 (264)
+.-+.+-|.|.+...-+ .+...+ ++...+.+.-|-||...+. ..+...-+.+.|+. +.|+
T Consensus 114 ~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~----~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws 189 (371)
T KOG1551|consen 114 DLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPE----EQIIHMLEYVTDLFKMGRATIQEFVKLFTWS 189 (371)
T ss_pred CeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCH----HHHHHHHHHHHHHHHhhHHHHHHHHHhcccc
Confidence 34444445555443222 233333 8899999999999988653 22211222223321 1222
Q ss_pred -HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccccc
Q 024681 82 -TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA 160 (264)
Q Consensus 82 -~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
..|..++.++|-||||.+|......++..|+-+=++++..... .+..+ ++.......+++........
T Consensus 190 ~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asv---s~teg--------~l~~~~s~~~~~~~~t~~~~ 258 (371)
T KOG1551|consen 190 SADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASV---SATEG--------LLLQDTSKMKRFNQTTNKSG 258 (371)
T ss_pred cccCcccceeeeeecccHHHHhhcccCCCCccccccccccccch---hhhhh--------hhhhhhHHHHhhccCcchhh
Confidence 1256799999999999999999998877666555555432111 01000 00000000000000000000
Q ss_pred CCCCCh-HHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccC-----EEEEecCCCCCcchhhHHHHHHHcCCCc
Q 024681 161 VGADVP-AAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVP-----CVIIQTSKDVSVPVSVAEYLQRHLGGRN 234 (264)
Q Consensus 161 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 234 (264)
.....+ +......+............+++.... +. ..+.+..+| +.++.+++|..+|......+.+..|+ +
T Consensus 259 ~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd-~~-T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg-~ 335 (371)
T KOG1551|consen 259 YTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMD-EC-THVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPG-C 335 (371)
T ss_pred hhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHH-hh-chhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCC-C
Confidence 000000 000000111111111222222222211 00 112222222 56778999999999999999999999 8
Q ss_pred eEEEecCCCCc-ccccChhcHHHHHHHHhcC
Q 024681 235 TVELLKIEGHL-PHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 235 ~~~~~~~~gH~-~~~~~~~~~~~~i~~fl~~ 264 (264)
++..++ +||. ..+-+.+.+.+.|.+-|++
T Consensus 336 eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 336 EVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 999999 8994 5566778898988887753
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.7e-07 Score=61.61 Aligned_cols=86 Identities=15% Similarity=0.271 Sum_probs=61.2
Q ss_pred EEEecCCCCChhhHHHhh--hhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 20 LVLAHGFGTDQSAWQRIL--PYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 20 vv~~hG~~~~~~~~~~~~--~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
||++|||.++........ +++ ....-+. .|.+.. . . +....++.+..++...+.+...|+|-|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~-------y~~p~l---~-h-~p~~a~~ele~~i~~~~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIE-------YSTPHL---P-H-DPQQALKELEKAVQELGDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcccccee-------eecCCC---C-C-CHHHHHHHHHHHHHHcCCCCceEEeecch
Confidence 799999999888776533 233 3322222 222210 0 1 48889999999999998788999999999
Q ss_pred HHHHHHHHHhCCCccceeEEecCC
Q 024681 97 AMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 97 g~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
|+.|..++.++. ++ .|+++|+
T Consensus 70 GY~At~l~~~~G--ir-av~~NPa 90 (191)
T COG3150 70 GYYATWLGFLCG--IR-AVVFNPA 90 (191)
T ss_pred HHHHHHHHHHhC--Ch-hhhcCCC
Confidence 999999999875 33 4556764
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.4e-07 Score=65.03 Aligned_cols=97 Identities=13% Similarity=0.161 Sum_probs=62.2
Q ss_pred CceEEEecCCC--CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hCCCeE
Q 024681 17 DRILVLAHGFG--TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LGVNRC 88 (264)
Q Consensus 17 ~p~vv~~hG~~--~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 88 (264)
..|||+.||++ ++...+..+.+.+ .++.+..+. .|-+..+ .-+..+.+.++.+.+-+.. +. +-+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~------s~~~~~~~Qv~~vce~l~~~~~L~-~G~ 97 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD------SLFMPLRQQASIACEKIKQMKELS-EGY 97 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc------ccccCHHHHHHHHHHHHhcchhhc-Cce
Confidence 45899999999 5555666666655 255444443 2222210 1111244444444433333 22 469
Q ss_pred EEEecChhHHHHHHHHHhCCC--ccceeEEecCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRPD--LFTKLILIGASP 121 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~ 121 (264)
+++|+|.||.++-.++.+.|+ .|+.+|.++++.
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 999999999999999999987 599999999863
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.8e-08 Score=74.44 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=78.8
Q ss_pred eEEEecCCCCChhhHHHhhhhc--CCce---EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEec
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--NHHR---VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGH 93 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~g~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 93 (264)
++|++||++.+...|..+...+ .|+. ++.++.++..... ......+++...+.+++...+.+++.|+||
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~~~ql~~~V~~~l~~~ga~~v~LigH 134 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTY------SLAVRGEQLFAYVDEVLAKTGAKKVNLIGH 134 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCc------cccccHHHHHHHHHHHHhhcCCCceEEEee
Confidence 8999999988888888888777 6776 8888887651111 111247778888888888888899999999
Q ss_pred ChhHHHHHHHHHhCC--CccceeEEecCCC
Q 024681 94 SVSAMIGLLASIRRP--DLFTKLILIGASP 121 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~ 121 (264)
||||.++..++...+ .+|+.++.++++-
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 999999999999888 7899999999864
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.6e-06 Score=63.38 Aligned_cols=60 Identities=17% Similarity=0.176 Sum_probs=49.2
Q ss_pred cccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecCCCCcccc-cChhcHHHHHHHHh
Q 024681 203 VRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKIEGHLPHL-SAPAIVGPVIRRAL 262 (264)
Q Consensus 203 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 262 (264)
..+|-++++++.|.+++.+..++..+..... ++...++++.|..+. ++|++..+.+.+|+
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4689999999999999998888776655332 677788999997665 57999999999885
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.1e-06 Score=60.77 Aligned_cols=93 Identities=20% Similarity=0.244 Sum_probs=70.0
Q ss_pred ceEEEecCCCCChh---hHHHhhhhc--CCceEEEecCCC----CCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC---
Q 024681 18 RILVLAHGFGTDQS---AWQRILPYL--NHHRVIMFDLVC----AGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--- 85 (264)
Q Consensus 18 p~vv~~hG~~~~~~---~~~~~~~~l--~g~~v~~~d~~g----~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 85 (264)
..|||+-|++..-. .-..+...| .+|.++-+.++. +|.+ ++.+-++|+..++++++.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~-----------slk~D~edl~~l~~Hi~~~~f 105 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF-----------SLKDDVEDLKCLLEHIQLCGF 105 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc-----------cccccHHHHHHHHHHhhccCc
Confidence 47899999887543 345677777 899999888763 3322 477888999999998743
Q ss_pred -CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 86 -NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 86 -~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
+.|+|+|||.|..=.+.+... .|..+.+.|+.+|..
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 489999999999888877732 456688888888754
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.5e-07 Score=72.20 Aligned_cols=106 Identities=19% Similarity=0.213 Sum_probs=68.4
Q ss_pred CCceEEEecCCCCChhhH--HHhhhhc---CCceEEEecCCCCCCCCCCC---CCCcccchHHHHHHHHHHHHHHhC---
Q 024681 16 GDRILVLAHGFGTDQSAW--QRILPYL---NHHRVIMFDLVCAGSVNPDY---FDFRRYTTLDAYVDDLLNILDTLG--- 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~--~~~~~~l---~g~~v~~~d~~g~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--- 84 (264)
+.|++|++-|-+.-...+ ..+...| -|-.++++++|-+|.|.|.. .+.-.|.+.++..+|+..+++.+.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 456666665543322222 2234444 47789999999999997631 122356679999999999988763
Q ss_pred ----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 85 ----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 85 ----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
..|++++|-|+||.+|..+-.++|+.|.+.+..+++.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 2389999999999999999999999999988887754
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.63 E-value=6.5e-06 Score=62.60 Aligned_cols=105 Identities=18% Similarity=0.148 Sum_probs=68.7
Q ss_pred CCceEEEecCCCCCh----hhHHH---hhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeE
Q 024681 16 GDRILVLAHGFGTDQ----SAWQR---ILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRC 88 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~----~~~~~---~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (264)
..|+||++||.|-.- ..... +...|....+++.|+.-...-... ..-+. .+.+.++-...+++..+.+++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~--~~yPt-QL~qlv~~Y~~Lv~~~G~~nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHG--HKYPT-QLRQLVATYDYLVESEGNKNI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCC--CcCch-HHHHHHHHHHHHHhccCCCeE
Confidence 358999999976432 22222 222335668999998654300000 01112 377777777888877788999
Q ss_pred EEEecChhHHHHHHHHHhCC-----CccceeEEecCCCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRP-----DLFTKLILIGASPRF 123 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~ 123 (264)
+|+|-|.||.+++.+..... ...+++|+++|....
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 99999999999987765321 236899999996443
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-05 Score=60.60 Aligned_cols=104 Identities=12% Similarity=0.106 Sum_probs=66.8
Q ss_pred CceEEEecCCCCChh---hHHHhhhhc--CCceEEEecCCCC--CCCCC----------CC---CCCc------------
Q 024681 17 DRILVLAHGFGTDQS---AWQRILPYL--NHHRVIMFDLVCA--GSVNP----------DY---FDFR------------ 64 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~---~~~~~~~~l--~g~~v~~~d~~g~--G~s~~----------~~---~~~~------------ 64 (264)
...||++||.+.+.. ....+...| .|++++++.+|.- ..... .. ....
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 359999999998864 345666778 8999999999871 10000 00 0000
Q ss_pred -cc-chHHHHHHHHHHHHH---HhCCCeEEEEecChhHHHHHHHHHhCCC-ccceeEEecCC
Q 024681 65 -RY-TTLDAYVDDLLNILD---TLGVNRCAYVGHSVSAMIGLLASIRRPD-LFTKLILIGAS 120 (264)
Q Consensus 65 -~~-~~~~~~~~~~~~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~ 120 (264)
.+ ..-+.+..-+.+.+. ..+..+++|+||+.|+..++.+....+. .++++|++++.
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 00 001222223333333 3355679999999999999999888764 58999999984
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.7e-06 Score=65.97 Aligned_cols=148 Identities=12% Similarity=0.142 Sum_probs=90.7
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
.++++++.|.|==|+.++..|+ ..+||++++-+.-... .....+......... .|...+.+.
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~L----------N~~~~l~h~y~~yG~---~ws~a~~dY---- 231 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVL----------NMKANLEHQYRSYGG---NWSFAFQDY---- 231 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccC----------CcHHHHHHHHHHhCC---CCccchhhh----
Confidence 5689999999999999999998 5568888876654211 011122222222110 121111110
Q ss_pred CChHHHHHHHHh-hcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCC
Q 024681 164 DVPAAVREFSRT-LFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242 (264)
Q Consensus 164 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (264)
+... ....+......+........+ ..++++|-++|.|..|.+..++....+.+.+++.+.+..+||+
T Consensus 232 --------~~~gi~~~l~tp~f~~L~~ivDP~~Y---~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~ 300 (367)
T PF10142_consen 232 --------YNEGITQQLDTPEFDKLMQIVDPYSY---RDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNA 300 (367)
T ss_pred --------hHhCchhhcCCHHHHHHHHhcCHHHH---HHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCC
Confidence 0000 111122222222222222222 3456899999999999999999999999999987889999999
Q ss_pred CCcccccChhcHHHHHHHHhc
Q 024681 243 GHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 243 gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+|.... ..+.+.+..|+.
T Consensus 301 ~H~~~~---~~~~~~l~~f~~ 318 (367)
T PF10142_consen 301 GHSLIG---SDVVQSLRAFYN 318 (367)
T ss_pred Ccccch---HHHHHHHHHHHH
Confidence 998765 555666666653
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.1e-06 Score=63.91 Aligned_cols=69 Identities=17% Similarity=0.185 Sum_probs=53.1
Q ss_pred cccccCCcc-cCEEEEecCCCCCcchhhHHHHHHHcCC-CceEEEecCCCCcccccChh---cHHHHHHHHhcC
Q 024681 196 LRGILGLVR-VPCVIIQTSKDVSVPVSVAEYLQRHLGG-RNTVELLKIEGHLPHLSAPA---IVGPVIRRALSR 264 (264)
Q Consensus 196 ~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~ 264 (264)
....+.++. .|+++++|..|..+|......+.+.... ..+...+++++|........ +..+.+.+|+.+
T Consensus 223 ~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 223 PFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred chhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 334444555 7999999999999999999998888776 46788889999987754433 677788888753
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.47 E-value=7.5e-07 Score=65.62 Aligned_cols=50 Identities=26% Similarity=0.477 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHh-CC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 71 AYVDDLLNILDTL-GV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 71 ~~~~~~~~~~~~~-~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
-+.++|...++.. .. ++..++|+||||..|+.++.++|+.+.+++++++.
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 3455666666554 22 23799999999999999999999999999999975
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.47 E-value=8.9e-07 Score=55.14 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=52.1
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
..|+|++.++.|+.+|.+.++.+++.+++ ++++.+++.||........-+.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 58999999999999999999999999999 899999999998876444556788888875
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.5e-06 Score=58.73 Aligned_cols=95 Identities=16% Similarity=0.166 Sum_probs=66.6
Q ss_pred ceEEEecCCCCChhh--HHHhhhhc---CCceEEEecCCCCC--CCCCCCCCCcccchHHHHHHHHHHHHHHhC--CCeE
Q 024681 18 RILVLAHGFGTDQSA--WQRILPYL---NHHRVIMFDLVCAG--SVNPDYFDFRRYTTLDAYVDDLLNILDTLG--VNRC 88 (264)
Q Consensus 18 p~vv~~hG~~~~~~~--~~~~~~~l---~g~~v~~~d~~g~G--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 88 (264)
.|+|++||++.+... ...+.+.+ .|..|++.|. |-| .|.- ..+.+.++.+.+.+.... .+-+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l--------~pl~~Qv~~~ce~v~~m~~lsqGy 94 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSL--------MPLWEQVDVACEKVKQMPELSQGY 94 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhh--------ccHHHHHHHHHHHHhcchhccCce
Confidence 489999999987765 66677766 7889999986 444 2211 124444444444444221 2569
Q ss_pred EEEecChhHHHHHHHHHhCCC-ccceeEEecCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRPD-LFTKLILIGASP 121 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 121 (264)
.++|.|.||.++-.++...++ .|+..|.++++.
T Consensus 95 nivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999999999999988764 588899888753
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.4e-06 Score=63.74 Aligned_cols=103 Identities=21% Similarity=0.254 Sum_probs=65.7
Q ss_pred CCCceEEEecCCCCChhh-HH---Hhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CC
Q 024681 15 TGDRILVLAHGFGTDQSA-WQ---RILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GV 85 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~-~~---~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 85 (264)
.++..+||+||+..+-+. -. .+.... .....+.+.||..|.--.-..|. - +...-..+++.+++.+ ..
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~Dr--e-S~~~Sr~aLe~~lr~La~~~~~ 190 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDR--E-STNYSRPALERLLRYLATDKPV 190 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccch--h-hhhhhHHHHHHHHHHHHhCCCC
Confidence 345699999998766432 22 233344 56677888998776542111111 1 2344455566666555 46
Q ss_pred CeEEEEecChhHHHHHHHHHh--------CCCccceeEEecCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIR--------RPDLFTKLILIGAS 120 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~--------~p~~v~~~vl~~~~ 120 (264)
++|+|++||||.++++....+ .+.+++-+|+-+|-
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 789999999999999887654 23467778888763
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.6e-06 Score=58.46 Aligned_cols=105 Identities=16% Similarity=0.235 Sum_probs=67.8
Q ss_pred CceEEEecCCCCChhhHHH---hhhhc--CCceEEEecCCCCCCCC---CCCCCC------------c----ccchHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQR---ILPYL--NHHRVIMFDLVCAGSVN---PDYFDF------------R----RYTTLDAY 72 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~---~~~~l--~g~~v~~~d~~g~G~s~---~~~~~~------------~----~~~~~~~~ 72 (264)
-|++.++-|+.++.+.+.. +.+.- .|+.|+.+|---.|..- ....+. + .|.-.+-+
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 4899999999998877642 22233 79999999974333220 001111 1 12211223
Q ss_pred HHHHHHHHHHh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 73 VDDLLNILDTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 73 ~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.+.+.++++.. +..++.+.||||||.=|+..+.+.|.+.+++-..+|..
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 34444555422 23479999999999999999999999999888888753
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.2e-05 Score=57.85 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=62.5
Q ss_pred ceEEEecCCCCChh--hHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hCCCeEE
Q 024681 18 RILVLAHGFGTDQS--AWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LGVNRCA 89 (264)
Q Consensus 18 p~vv~~hG~~~~~~--~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 89 (264)
.|+|+.||+|.+.. ....+.+.+ .|..+.++.. |.+... .-+..+.+.++.+.+-+.. +. +-++
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~----s~~~~~~~Qve~vce~l~~~~~l~-~G~n 97 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGD----SWLMPLTQQAEIACEKVKQMKELS-QGYN 97 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccc----cceeCHHHHHHHHHHHHhhchhhh-CcEE
Confidence 48999999987643 334444444 5666666654 332211 1111244444444444333 32 4699
Q ss_pred EEecChhHHHHHHHHHhCCC--ccceeEEecCCC
Q 024681 90 YVGHSVSAMIGLLASIRRPD--LFTKLILIGASP 121 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~ 121 (264)
++|+|.||.++-.++.+.|+ .|+.+|.++++.
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 99999999999999999987 599999999863
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.5e-06 Score=62.37 Aligned_cols=107 Identities=15% Similarity=0.150 Sum_probs=78.6
Q ss_pred CCCCceEEEecCCCCChhhHHH---hhhhc---CCceEEEecCCCCCCCCCCCC------CCcccchHHHHHHHHHHHHH
Q 024681 14 GTGDRILVLAHGFGTDQSAWQR---ILPYL---NHHRVIMFDLVCAGSVNPDYF------DFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~~~~~~---~~~~l---~g~~v~~~d~~g~G~s~~~~~------~~~~~~~~~~~~~~~~~~~~ 81 (264)
..++.||+|.-|.-++-+.|.. ++-.+ .+--++..++|-+|+|-|-.. ..-.|.+.++..+|..+++.
T Consensus 77 ~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 77 KKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred cCCCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 3443589999998888876643 33333 466788999999999965211 11245567777888888887
Q ss_pred HhC------CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 82 TLG------VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 82 ~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.+. ..+|+.+|.|+||++|..+-.++|..+.+...-+++
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 773 248999999999999999999999988876655554
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.8e-06 Score=60.67 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=54.1
Q ss_pred CceEEEecCCCCCh---hhHH---Hhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC--CCe
Q 024681 17 DRILVLAHGFGTDQ---SAWQ---RILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG--VNR 87 (264)
Q Consensus 17 ~p~vv~~hG~~~~~---~~~~---~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 87 (264)
..|||+.||+|.+. ..+. .+++.. .|.-|..++. |-+.++.. ...-+.++.+.++.+.+.+.... .+-
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~--~~s~f~~v~~Qv~~vc~~l~~~p~L~~G 81 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDV--ENSFFGNVNDQVEQVCEQLANDPELANG 81 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHH--HHHHHSHHHHHHHHHHHHHHH-GGGTT-
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhh--hhhHHHHHHHHHHHHHHHHhhChhhhcc
Confidence 35899999999643 2344 344444 7888888886 22211100 00111234555555555554421 157
Q ss_pred EEEEecChhHHHHHHHHHhCCC-ccceeEEecCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPD-LFTKLILIGASP 121 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 121 (264)
++++|+|.||.++-.++.++|+ .|+.+|.++++.
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 9999999999999999999875 699999999863
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.7e-05 Score=64.91 Aligned_cols=96 Identities=10% Similarity=0.088 Sum_probs=59.6
Q ss_pred ceEEEecCCCCChhhHHHhhhh-----------------c-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHH
Q 024681 18 RILVLAHGFGTDQSAWQRILPY-----------------L-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~-----------------l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~ 79 (264)
-||+|++|..++...-+.++.. . ..|+..++|+-+- .| ...+. ++.+.++.+.+.
T Consensus 90 IPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-~t-----Am~G~-~l~dQtEYV~dA 162 (973)
T KOG3724|consen 90 IPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-FT-----AMHGH-ILLDQTEYVNDA 162 (973)
T ss_pred ceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-hh-----hhccH-hHHHHHHHHHHH
Confidence 3899999999987766554431 1 3566677775320 00 01111 466667666666
Q ss_pred HHHh-----C--------CCeEEEEecChhHHHHHHHHHh---CCCccceeEEecCC
Q 024681 80 LDTL-----G--------VNRCAYVGHSVSAMIGLLASIR---RPDLFTKLILIGAS 120 (264)
Q Consensus 80 ~~~~-----~--------~~~~~l~G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~ 120 (264)
++.. + ...|+|+||||||.+|...+.. .++.|+-++..+++
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 6543 2 2359999999999999877653 23456666666654
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00044 Score=54.80 Aligned_cols=59 Identities=22% Similarity=0.284 Sum_probs=47.3
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcC------------C------------CceEEEecCCCCcccccChhcHHHHHH
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLG------------G------------RNTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------~------------~~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
.++||+..|+.|.+++.-..+.+.+.+. + ..+++.+-++||+++ .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999999999877777766552 1 034566778999996 58999999999
Q ss_pred HHhc
Q 024681 260 RALS 263 (264)
Q Consensus 260 ~fl~ 263 (264)
+|+.
T Consensus 426 ~Fi~ 429 (433)
T PLN03016 426 RWIS 429 (433)
T ss_pred HHHc
Confidence 9985
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.4e-06 Score=66.26 Aligned_cols=102 Identities=18% Similarity=0.073 Sum_probs=61.3
Q ss_pred CCceEEEecCCCC---ChhhHHHhhhhc---CC-ceEEEecCC----CCCCCCCCCCCCcccchHHHHHH---HHHHHHH
Q 024681 16 GDRILVLAHGFGT---DQSAWQRILPYL---NH-HRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVD---DLLNILD 81 (264)
Q Consensus 16 ~~p~vv~~hG~~~---~~~~~~~~~~~l---~g-~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~---~~~~~~~ 81 (264)
..|+||++||.+. +...+ ....| .+ +.|+++++| |+..+... ....++. +.|... .+.+-++
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~~~~n~g-~~D~~~al~wv~~~i~ 169 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-ELPGNYG-LKDQRLALKWVQDNIA 169 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC-CCCcchh-HHHHHHHHHHHHHHHH
Confidence 4589999999542 22222 12223 33 899999999 33332211 1112222 334333 3344444
Q ss_pred HhC--CCeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 82 TLG--VNRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 82 ~~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
..+ .++|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 170 ~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 170 AFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 444 3589999999999998877765 235688888888754
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.0001 Score=56.50 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=30.1
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
|++++|+|.||++|..+|.-.|..+++++=-++.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 8999999999999999999999988888766553
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00069 Score=53.78 Aligned_cols=59 Identities=19% Similarity=0.260 Sum_probs=47.3
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcCC------------------------CceEEEecCCCCcccccChhcHHHHHH
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLGG------------------------RNTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
.++||+..|+.|.+++.-..+.+.+.++- ..+++.+-+|||++. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 47999999999999998777777765530 034556778999996 69999999999
Q ss_pred HHhc
Q 024681 260 RALS 263 (264)
Q Consensus 260 ~fl~ 263 (264)
+|+.
T Consensus 430 ~fi~ 433 (437)
T PLN02209 430 RWIS 433 (437)
T ss_pred HHHc
Confidence 9985
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.0017 Score=51.44 Aligned_cols=59 Identities=19% Similarity=0.212 Sum_probs=47.3
Q ss_pred cCEEEEecCCCCCcchhhHHHHHHHcCC--------------C----------ceEEEecCCCCcccccChhcHHHHHHH
Q 024681 205 VPCVIIQTSKDVSVPVSVAEYLQRHLGG--------------R----------NTVELLKIEGHLPHLSAPAIVGPVIRR 260 (264)
Q Consensus 205 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~--------------~----------~~~~~~~~~gH~~~~~~~~~~~~~i~~ 260 (264)
.++++..|+.|.++|.-..+.+.+.+.- . ..+..+.|+||++..++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999998777766544310 0 234677899999999999999999999
Q ss_pred Hhc
Q 024681 261 ALS 263 (264)
Q Consensus 261 fl~ 263 (264)
||.
T Consensus 444 fl~ 446 (454)
T KOG1282|consen 444 FLN 446 (454)
T ss_pred HHc
Confidence 985
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.6e-05 Score=60.67 Aligned_cols=105 Identities=13% Similarity=0.135 Sum_probs=69.5
Q ss_pred CCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCc----ccchHHHHHHHHHHHHHHh--CC
Q 024681 16 GDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFR----RYTTLDAYVDDLLNILDTL--GV 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~ 85 (264)
.+|.+|..+|.-+-. ..|+.-...| .|+.....|.||=|+-.......+ ..++++++....+.+++.- ..
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~ 548 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQP 548 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCc
Confidence 347677666633322 2343333333 899999999999776533221111 2224666666555555432 34
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.+..+.|.|.||.++-++..++|+.+.++|+-.|.
T Consensus 549 ~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 549 SKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPF 583 (712)
T ss_pred cceeEecccCccchhHHHhccCchHhhhhhhcCcc
Confidence 68999999999999999999999999998887774
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00021 Score=57.83 Aligned_cols=107 Identities=14% Similarity=0.207 Sum_probs=72.6
Q ss_pred CCceEEEecCCCCCh--hhHH-Hhhhhc-CCceEEEecCCCCCCCCCCCCC----CcccchHHHHHHHHHHHHHHh--CC
Q 024681 16 GDRILVLAHGFGTDQ--SAWQ-RILPYL-NHHRVIMFDLVCAGSVNPDYFD----FRRYTTLDAYVDDLLNILDTL--GV 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~-~~~~~l-~g~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~ 85 (264)
..|.++..-|.-+.+ ..|. .....| +|+--...--||=|+-....+. ...-+++.++++....+++.- ..
T Consensus 447 ~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~ 526 (682)
T COG1770 447 SAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSP 526 (682)
T ss_pred CCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCc
Confidence 346777776643332 2233 233344 8988777778887665332111 122236788887777777653 33
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+.++++|-|.||++.-..+...|+.++++|+--|...
T Consensus 527 ~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 527 DRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred cceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 5899999999999999999999999999999888644
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00069 Score=51.73 Aligned_cols=59 Identities=22% Similarity=0.284 Sum_probs=47.0
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcC------------C------------CceEEEecCCCCcccccChhcHHHHHH
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLG------------G------------RNTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------~------------~~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
.++||+..|+.|.+++.-..+.+.+.+. + ..+++.+-++||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999999999877777766653 1 034555668999996 59999999999
Q ss_pred HHhc
Q 024681 260 RALS 263 (264)
Q Consensus 260 ~fl~ 263 (264)
+|+.
T Consensus 312 ~fi~ 315 (319)
T PLN02213 312 RWIS 315 (319)
T ss_pred HHHc
Confidence 9985
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0022 Score=50.67 Aligned_cols=102 Identities=9% Similarity=0.033 Sum_probs=65.5
Q ss_pred CCceEEEecCCCCChhhHHHhhh----hc----------------CCceEEEecC-CCCCCCCCCCCCCcccchHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP----YL----------------NHHRVIMFDL-VCAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~----~l----------------~g~~v~~~d~-~g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
.+|.++++.|.++++..+-.+.+ .+ ..-.++.+|+ -|.|.|.... .+.-.++....+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~--~e~~~d~~~~~~ 177 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALG--DEKKKDFEGAGK 177 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccc--cccccchhccch
Confidence 36899999999999988866533 11 2347899995 4888886311 111123555555
Q ss_pred HHHHHHHHh-------C--CCeEEEEecChhHHHHHHHHHhCCC---ccceeEEecC
Q 024681 75 DLLNILDTL-------G--VNRCAYVGHSVSAMIGLLASIRRPD---LFTKLILIGA 119 (264)
Q Consensus 75 ~~~~~~~~~-------~--~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~ 119 (264)
|+..+.+.. . ..+.+|+|-|+||.-+-.+|...-+ ..++++++.+
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlss 234 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSS 234 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeee
Confidence 555444322 2 2489999999999888777765333 3566666655
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.96 E-value=6.6e-05 Score=59.88 Aligned_cols=194 Identities=17% Similarity=0.180 Sum_probs=104.5
Q ss_pred CceEEEecCCCCCh--hhHHHhhh-hc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CC---C
Q 024681 17 DRILVLAHGFGTDQ--SAWQRILP-YL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GV---N 86 (264)
Q Consensus 17 ~p~vv~~hG~~~~~--~~~~~~~~-~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~ 86 (264)
.|++|+--|...-+ ..|..... .| +|...+.-+.||=|+=.+..+....-.+-+...+|..++.+.+ ++ +
T Consensus 421 ~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe 500 (648)
T COG1505 421 NPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPE 500 (648)
T ss_pred CceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHH
Confidence 56776666533222 34444443 44 8999999999998876542111110001223334444444444 33 4
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP 166 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
++.+.|-|-||.+.-.+..++|+.+.++|+--|......-..+ ..-..|...+. .++.+
T Consensus 501 ~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l-----------------~aG~sW~~EYG----~Pd~P 559 (648)
T COG1505 501 KLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLL-----------------TAGSSWIAEYG----NPDDP 559 (648)
T ss_pred HhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhccc-----------------ccchhhHhhcC----CCCCH
Confidence 7899999999999988889999988888776663221110000 01112221111 11112
Q ss_pred HHHHHHHHhhcccCchhhhhhhhhhcCCccccccCC-c-ccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecC
Q 024681 167 AAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGL-V-RVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKI 241 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~ 241 (264)
+... +...+. | ...++. . =-|+||-.+.+|.-|.|..++.++.++... +-+.+=.+
T Consensus 560 ~d~~-~l~~YS---P---------------y~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~ 620 (648)
T COG1505 560 EDRA-FLLAYS---P---------------YHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETK 620 (648)
T ss_pred HHHH-HHHhcC---c---------------hhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecC
Confidence 2111 111111 1 111111 1 237899999999888888888888777542 33333345
Q ss_pred CCCcccccC
Q 024681 242 EGHLPHLSA 250 (264)
Q Consensus 242 ~gH~~~~~~ 250 (264)
+||..--+.
T Consensus 621 gGH~g~~~~ 629 (648)
T COG1505 621 GGHGGAAPT 629 (648)
T ss_pred CcccCCCCh
Confidence 999765443
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00065 Score=49.95 Aligned_cols=115 Identities=13% Similarity=0.128 Sum_probs=63.7
Q ss_pred eeeEEEEeCC----CCceEEEecCC--CCChhhHHHhhhhc-----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHH
Q 024681 6 EALHVRVVGT----GDRILVLAHGF--GTDQSAWQRILPYL-----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 6 ~~~~~~~~g~----~~p~vv~~hG~--~~~~~~~~~~~~~l-----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
..+.|...|- .-|++++.||- ..+...++.+-..+ ..-.++.+|.-.--........... .+..++.
T Consensus 83 ~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~--~~~~L~~ 160 (299)
T COG2382 83 RRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEA--YWRFLAQ 160 (299)
T ss_pred eEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHH--HHHHHHH
Confidence 3444555443 33799999982 22222222222222 4556777765321000000000011 1334444
Q ss_pred HHHHHHHHh-----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 75 DLLNILDTL-----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 75 ~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
++.=.++.. ..+.-+|+|.|+||.+++..+..+|+.+-.++..++...
T Consensus 161 eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 161 ELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 444444332 123578999999999999999999999999998888643
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.89 E-value=5.4e-05 Score=51.18 Aligned_cols=53 Identities=15% Similarity=0.228 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHh----CCCeEEEEecChhHHHHHHHHHhCCC----ccceeEEecCCC
Q 024681 69 LDAYVDDLLNILDTL----GVNRCAYVGHSVSAMIGLLASIRRPD----LFTKLILIGASP 121 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~ 121 (264)
...+.+.+...++.. ...+++++|||+||.+|..++..... ....++.++++.
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 444455555555443 45799999999999999998887654 566777777753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.1e-05 Score=62.47 Aligned_cols=104 Identities=18% Similarity=0.105 Sum_probs=57.2
Q ss_pred CceEEEecCCCC---Ch--hhHHHhhhhc-CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHH---HHh
Q 024681 17 DRILVLAHGFGT---DQ--SAWQRILPYL-NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNIL---DTL 83 (264)
Q Consensus 17 ~p~vv~~hG~~~---~~--~~~~~~~~~l-~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 83 (264)
-|++|+|||.+. +. ..+....-.. +++-|+++++| |+-.+........++. +.|....+.-+- ...
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~G-l~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYG-LLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHH-HHHHHHHHHHHHHHGGGG
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhh-hhhhHHHHHHHHhhhhhc
Confidence 389999999442 22 2222222223 89999999998 3322221110014444 555555554443 444
Q ss_pred CC--CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 84 GV--NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 84 ~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
|- ++|.|+|||.||..+...... ....+.++|+.+++.
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred ccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 43 589999999999887665544 235799999999854
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.86 E-value=5.9e-05 Score=59.06 Aligned_cols=78 Identities=14% Similarity=0.266 Sum_probs=53.2
Q ss_pred hHHHhhhhc--CCce------EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEEEEecChhHHHH
Q 024681 32 AWQRILPYL--NHHR------VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCAYVGHSVSAMIG 100 (264)
Q Consensus 32 ~~~~~~~~l--~g~~------v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a 100 (264)
.|..+++.| .||. ..-+|+|---. ..+++...+...++.. +.++|+|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~------------~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA------------ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh------------hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHH
Confidence 588888888 5553 22378772211 1334444454444433 35799999999999999
Q ss_pred HHHHHhCCC------ccceeEEecCCC
Q 024681 101 LLASIRRPD------LFTKLILIGASP 121 (264)
Q Consensus 101 ~~~a~~~p~------~v~~~vl~~~~~ 121 (264)
..+....+. .|+++|.++++.
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 998887743 599999999863
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00014 Score=54.84 Aligned_cols=106 Identities=15% Similarity=0.192 Sum_probs=64.4
Q ss_pred CCceEEEecCCCCChhhHH---Hhhhhc--CCceEEEecC--------------CCCCCC---CCCC--CCCcccchHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQ---RILPYL--NHHRVIMFDL--------------VCAGSV---NPDY--FDFRRYTTLDA 71 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~---~~~~~l--~g~~v~~~d~--------------~g~G~s---~~~~--~~~~~~~~~~~ 71 (264)
.-|+++++||..++...+. .+-+.. .++.++++|- .|-+.| +... .....|. +++
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q-~~t 131 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQ-WET 131 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccc-hhH
Confidence 3478899999888753332 222222 5666666533 233333 1100 0001133 443
Q ss_pred H-HHHHHHHHHHhCC-----CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 72 Y-VDDLLNILDTLGV-----NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 72 ~-~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+ .+++-..+++... ++..++||||||.=|+.+|.++|++++.+..+++...
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~ 188 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILS 188 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccc
Confidence 3 3455544443322 2789999999999999999999999999999888644
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0082 Score=43.20 Aligned_cols=92 Identities=22% Similarity=0.166 Sum_probs=55.2
Q ss_pred eEEEecCCC--CC-hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CC----
Q 024681 19 ILVLAHGFG--TD-QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GV---- 85 (264)
Q Consensus 19 ~vv~~hG~~--~~-~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---- 85 (264)
+|-|+-|.. .. .-.|+.+.+.| +||.|++.-+.- | .+...-..+..+.....++.+ +.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t--------fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~ 89 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T--------FDHQAIAREVWERFERCLRALQKRGGLDPAY 89 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C--------CcHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 566666622 22 34788999999 999999987631 1 111111111112222222222 22
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
-|++-+|||+|+-+-+.+...++..-++-|+++-
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 2788999999999988888777655566677764
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00047 Score=47.79 Aligned_cols=100 Identities=22% Similarity=0.245 Sum_probs=61.6
Q ss_pred ceEEEecCCCCC-hhhHHH---------------hhh-hc-CCceEEEecCCC---CCCCCCCCCCCcccc-h-HHHHHH
Q 024681 18 RILVLAHGFGTD-QSAWQR---------------ILP-YL-NHHRVIMFDLVC---AGSVNPDYFDFRRYT-T-LDAYVD 74 (264)
Q Consensus 18 p~vv~~hG~~~~-~~~~~~---------------~~~-~l-~g~~v~~~d~~g---~G~s~~~~~~~~~~~-~-~~~~~~ 74 (264)
..+|+|||.|-- +..|.+ +++ .. .||.|++.+--- +-++... +..|. + .+...-
T Consensus 102 kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~n---p~kyirt~veh~~y 178 (297)
T KOG3967|consen 102 KLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRN---PQKYIRTPVEHAKY 178 (297)
T ss_pred ceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccC---cchhccchHHHHHH
Confidence 489999997753 334532 222 23 799999887421 1111111 12221 1 222222
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCC--ccceeEEecCC
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPD--LFTKLILIGAS 120 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~ 120 (264)
-...++.....+.+.++.||+||...+.+..++|+ +|.++.+-+++
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 23344445566899999999999999999999884 67777777775
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.002 Score=44.20 Aligned_cols=53 Identities=25% Similarity=0.234 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhC-----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 69 LDAYVDDLLNILDTLG-----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.+.-+.+|..+++.+. ..++.++|||+|+.++-..+...+..+..+|+++++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 4556667777776653 2378999999999999888887677899999998764
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00028 Score=55.24 Aligned_cols=106 Identities=16% Similarity=0.201 Sum_probs=79.6
Q ss_pred CCCceEEEecCCCCChhhH--------HHhhhhcCCceEEEecCCCCCCCCCCCC---CCcccchHHHHHHHHHHHHHHh
Q 024681 15 TGDRILVLAHGFGTDQSAW--------QRILPYLNHHRVIMFDLVCAGSVNPDYF---DFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~--------~~~~~~l~g~~v~~~d~~g~G~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
++.|..++|-|=+.....| ..+++. -|-.|+..++|-+|.|.+... ..-.|.+..+...|+.++|+.+
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akk-fgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKK-FGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHH-hCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 4668888888865554444 222222 477899999999999865221 1234557889999999999988
Q ss_pred CC-------CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 84 GV-------NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 84 ~~-------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+. .|.+.+|.|+-|.++..+-.++|+.+.+.|..+++.
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 42 289999999999999999999999998888776653
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00037 Score=54.69 Aligned_cols=106 Identities=17% Similarity=0.118 Sum_probs=60.9
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc--CC-ceEEEecCCC--CCCCCCCCCC-----CcccchHHHHH---HHHHHH
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL--NH-HRVIMFDLVC--AGSVNPDYFD-----FRRYTTLDAYV---DDLLNI 79 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l--~g-~~v~~~d~~g--~G~s~~~~~~-----~~~~~~~~~~~---~~~~~~ 79 (264)
+.|++|+|||.+ ++......--..| +| +-|+++++|- .|.-+-+..+ ..+.. +.|++ +.+.+-
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G-l~DqilALkWV~~N 171 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG-LLDQILALKWVRDN 171 (491)
T ss_pred CCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc-HHHHHHHHHHHHHH
Confidence 459999999943 2222211222344 55 8999999982 1221111000 11111 44444 344455
Q ss_pred HHHhCC--CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCCC
Q 024681 80 LDTLGV--NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASPR 122 (264)
Q Consensus 80 ~~~~~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 122 (264)
|++.|- ++|.|+|+|.||+.++.+.+. ....+.++|+.++...
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 566654 589999999999988776653 2235777888887543
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00011 Score=56.15 Aligned_cols=119 Identities=14% Similarity=0.129 Sum_probs=90.9
Q ss_pred CCcceeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 2 GDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
|..-+++.....+...|+|+..-|.+.+....+.-...|-+-+-+.+++|-+|.|.+.+.+ ..+.++++.++|...+++
T Consensus 48 gtF~QRvtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Lld~NQl~vEhRfF~~SrP~p~D-W~~Lti~QAA~D~Hri~~ 126 (448)
T PF05576_consen 48 GTFQQRVTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLLDGNQLSVEHRFFGPSRPEPAD-WSYLTIWQAASDQHRIVQ 126 (448)
T ss_pred CceEEEEEEEEcCCCCCeEEEecCcccccCccccchhHhhccceEEEEEeeccCCCCCCCC-cccccHhHhhHHHHHHHH
Confidence 5666778887888888999999998876543332122223446688999999999876543 455579999999999988
Q ss_pred HhC---CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 82 TLG---VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 82 ~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.+. ..+-+--|-|=||+.++.+=.-+|+-|.+.|.-.++.
T Consensus 127 A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 127 AFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred HHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 874 2577888999999999998888999999887765543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0079 Score=44.15 Aligned_cols=101 Identities=19% Similarity=0.307 Sum_probs=71.0
Q ss_pred CceEEEecCCCCCh-hhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecC
Q 024681 17 DRILVLAHGFGTDQ-SAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHS 94 (264)
Q Consensus 17 ~p~vv~~hG~~~~~-~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 94 (264)
.|.|+++-.+.++. ...+...+.| ....|+..|+-.-..-.- ....+ +++++++.+.+.++.+|.+ +++++.|
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~---~~G~F-dldDYIdyvie~~~~~Gp~-~hv~aVC 177 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPL---EAGHF-DLDDYIDYVIEMINFLGPD-AHVMAVC 177 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeec---ccCCc-cHHHHHHHHHHHHHHhCCC-CcEEEEe
Confidence 35777777766654 4456677777 888899999864332221 12444 4999999999999999965 7888877
Q ss_pred hhH-----HHHHHHHHhCCCccceeEEecCCCC
Q 024681 95 VSA-----MIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 95 ~Gg-----~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
.=+ .++++.+...|...+++++++++..
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 765 4445555557777889999988643
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00022 Score=47.34 Aligned_cols=36 Identities=19% Similarity=0.299 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 71 AYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
...+.+..+++.....++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 455566666655565789999999999999887765
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00069 Score=51.70 Aligned_cols=82 Identities=21% Similarity=0.150 Sum_probs=60.6
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCeEEEE
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNRCAYV 91 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~ 91 (264)
..-||+.|=|+-...=+.+...| +|+.|+.+|-.=|=.|.. +.++.++|+..+++.. +..++.|+
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r---------tPe~~a~Dl~r~i~~y~~~w~~~~~~li 331 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER---------TPEQIAADLSRLIRFYARRWGAKRVLLI 331 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC---------CHHHHHHHHHHHHHHHHHhhCcceEEEE
Confidence 35566766666444446677888 999999999765555543 4788888888888754 66799999
Q ss_pred ecChhHHHHHHHHHhCC
Q 024681 92 GHSVSAMIGLLASIRRP 108 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p 108 (264)
|+|+|+-+.-..-.+.|
T Consensus 332 GySfGADvlP~~~n~L~ 348 (456)
T COG3946 332 GYSFGADVLPFAYNRLP 348 (456)
T ss_pred eecccchhhHHHHHhCC
Confidence 99999987765555554
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0042 Score=54.25 Aligned_cols=98 Identities=13% Similarity=0.185 Sum_probs=71.0
Q ss_pred CCCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEec
Q 024681 15 TGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGH 93 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~ 93 (264)
+..|+++|+|..-+....+..++..| ..|-||.-... .-..+++++.++....-++.+.. .|..++|+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rl--------e~PaYglQ~T~---~vP~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRL--------EIPAYGLQCTE---AVPLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhc--------CCcchhhhccc---cCCcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 45689999999999888888888877 12333332211 11223688888888888887765 59999999
Q ss_pred ChhHHHHHHHHHhCC--CccceeEEecCCCCC
Q 024681 94 SVSAMIGLLASIRRP--DLFTKLILIGASPRF 123 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~ 123 (264)
|+|+.++..+|.... +....+|++++++.+
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 999999999887542 345669999987654
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00052 Score=49.67 Aligned_cols=51 Identities=27% Similarity=0.437 Sum_probs=40.1
Q ss_pred HHHHHHHHHHH---hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 72 YVDDLLNILDT---LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 72 ~~~~~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+.+++.-++++ .+.++..++|||+||.+++.....+|+.+...++++|+..
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 33444444544 2445799999999999999999999999999999998644
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00093 Score=47.97 Aligned_cols=47 Identities=17% Similarity=0.153 Sum_probs=34.9
Q ss_pred HHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC----CccceeEEecCCC
Q 024681 74 DDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP----DLFTKLILIGASP 121 (264)
Q Consensus 74 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~ 121 (264)
+-+..+++..+ +++.+.|||.||.+|..+|...+ ++|.++...+++.
T Consensus 73 ~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 73 AYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 33444444444 46999999999999999888743 5788999888853
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0014 Score=47.57 Aligned_cols=23 Identities=17% Similarity=0.265 Sum_probs=19.5
Q ss_pred CCCeEEEEecChhHHHHHHHHHh
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
...++++.|||+||.+|..++..
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHH
Confidence 34689999999999999887765
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.011 Score=39.21 Aligned_cols=77 Identities=14% Similarity=0.209 Sum_probs=51.5
Q ss_pred ceEEEecCCCCChhhHHHhhhhcCCce-EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 18 RILVLAHGFGTDQSAWQRILPYLNHHR-VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l~g~~-v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
..||++-|++..++....+.-. +++. ++++|++..... + ++. ..+.+.||++|||
T Consensus 12 ~LIvyFaGwgtpps~v~HLilp-eN~dl~lcYDY~dl~ld---------f-Dfs-------------Ay~hirlvAwSMG 67 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLILP-ENHDLLLCYDYQDLNLD---------F-DFS-------------AYRHIRLVAWSMG 67 (214)
T ss_pred EEEEEEecCCCCHHHHhhccCC-CCCcEEEEeehhhcCcc---------c-chh-------------hhhhhhhhhhhHH
Confidence 3899999999998766554311 4544 567887643111 1 011 1246789999999
Q ss_pred HHHHHHHHHhCCCccceeEEecCC
Q 024681 97 AMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 97 g~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
-++|-++....+ .++.+.+++.
T Consensus 68 VwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred HHHHHHHHhhcc--ccceeeecCC
Confidence 999999887764 6777777764
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0014 Score=51.25 Aligned_cols=84 Identities=13% Similarity=0.146 Sum_probs=53.2
Q ss_pred hhHHHhhhhc--CCce------EEEecCCC-CCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHH
Q 024681 31 SAWQRILPYL--NHHR------VIMFDLVC-AGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL 101 (264)
Q Consensus 31 ~~~~~~~~~l--~g~~------v~~~d~~g-~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 101 (264)
..|..+++.| -||. -..+|+|- +-.+.. .+. .+..+..-++...+.-+.+|++|++||||+.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~----rd~--yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEE----RDQ--YLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhH----HHH--HHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 4677888877 4554 35677763 111111 111 2444444444444444668999999999999999
Q ss_pred HHHHhCCC--------ccceeEEecCC
Q 024681 102 LASIRRPD--------LFTKLILIGAS 120 (264)
Q Consensus 102 ~~a~~~p~--------~v~~~vl~~~~ 120 (264)
.+...+++ .|++.+-++++
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCch
Confidence 99988776 36666666653
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0021 Score=48.52 Aligned_cols=48 Identities=17% Similarity=0.121 Sum_probs=42.5
Q ss_pred CCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 201 GLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 201 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
.++..|-.++.+..|.+.+++.+...++.+|+.+-+.++|+..|...-
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n 373 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN 373 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH
Confidence 456889999999999999999999999999997788999999997653
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0031 Score=49.59 Aligned_cols=37 Identities=16% Similarity=0.099 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 69 LDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
..++.+.+...+......++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3345555666666555568999999999999988754
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0019 Score=52.30 Aligned_cols=80 Identities=15% Similarity=0.189 Sum_probs=48.9
Q ss_pred hHHHhhhhc--CCce-----EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCeEEEEecChhHHHH
Q 024681 32 AWQRILPYL--NHHR-----VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNRCAYVGHSVSAMIG 100 (264)
Q Consensus 32 ~~~~~~~~l--~g~~-----v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a 100 (264)
.|..+++.| .||. ...+|+|-.. .. .. .-+++...+...++.+ +.++|+|+||||||.++
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls~---~~---le---~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ 227 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLSF---QN---TE---VRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYF 227 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccCc---cc---hh---hhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHH
Confidence 567888888 6774 3344554111 00 00 1233434444444432 35799999999999999
Q ss_pred HHHHHhCC---------------CccceeEEecCC
Q 024681 101 LLASIRRP---------------DLFTKLILIGAS 120 (264)
Q Consensus 101 ~~~a~~~p---------------~~v~~~vl~~~~ 120 (264)
+.+..... ..|++.|.++++
T Consensus 228 lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 228 LHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 98765321 247888998875
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0049 Score=51.10 Aligned_cols=103 Identities=21% Similarity=0.184 Sum_probs=60.2
Q ss_pred CceEEEecCCCC---ChhhHHHhh--hhc--CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHHHH---
Q 024681 17 DRILVLAHGFGT---DQSAWQRIL--PYL--NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNILDT--- 82 (264)
Q Consensus 17 ~p~vv~~hG~~~---~~~~~~~~~--~~l--~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--- 82 (264)
-|++|++||.+. +...+.... ..+ ++.-|+++.+| |+...... ..+.++. +.|+...+.-+-+.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~-~~~gN~g-l~Dq~~AL~wv~~~I~~ 189 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDS-AAPGNLG-LFDQLLALRWVKDNIPS 189 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCC-CCCCccc-HHHHHHHHHHHHHHHHh
Confidence 589999999653 222232221 122 57888888887 33222211 1135554 55555555444443
Q ss_pred hC--CCeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 83 LG--VNRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 83 ~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
.| .++|.|+|||.||..+..+... ....+.++|..++..
T Consensus 190 FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 190 FGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred cCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 33 4689999999999988665542 124566677776643
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.00096 Score=51.07 Aligned_cols=86 Identities=16% Similarity=0.272 Sum_probs=51.2
Q ss_pred ceEEEecCCCC-ChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecCh
Q 024681 18 RILVLAHGFGT-DQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSV 95 (264)
Q Consensus 18 p~vv~~hG~~~-~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 95 (264)
-.+|++||+-+ +...|...+... ..+.=..+..+|+-.......+...+- -+..++++.+.+....++++..+|||+
T Consensus 81 HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~l-G~Rla~~~~e~~~~~si~kISfvghSL 159 (405)
T KOG4372|consen 81 HLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVL-GERLAEEVKETLYDYSIEKISFVGHSL 159 (405)
T ss_pred eEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceee-ecccHHHHhhhhhccccceeeeeeeec
Confidence 48999999777 667777666555 222211333344333222222222222 344566666666666688999999999
Q ss_pred hHHHHHHHH
Q 024681 96 SAMIGLLAS 104 (264)
Q Consensus 96 Gg~~a~~~a 104 (264)
||.++..+.
T Consensus 160 GGLvar~AI 168 (405)
T KOG4372|consen 160 GGLVARYAI 168 (405)
T ss_pred CCeeeeEEE
Confidence 999876543
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0043 Score=48.99 Aligned_cols=36 Identities=19% Similarity=0.318 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.++.+.+..+++.....++++.|||+||.+|..+|.
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 345667777777766678999999999999988774
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0034 Score=48.89 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhCCC--eEEEEecChhHHHHHHHHHh
Q 024681 70 DAYVDDLLNILDTLGVN--RCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+++.+++..+++....+ ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45666666776665433 68999999999999988764
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0045 Score=42.93 Aligned_cols=74 Identities=19% Similarity=0.170 Sum_probs=42.3
Q ss_pred CCceEEEecCCCCCCCCCCCCCCccc-chHHHHHHHHHHHH----HHhCCCeEEEEecChhHHHHHHHHHh--C----CC
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRY-TTLDAYVDDLLNIL----DTLGVNRCAYVGHSVSAMIGLLASIR--R----PD 109 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~l~G~S~Gg~~a~~~a~~--~----p~ 109 (264)
....+..+++|-..... .| .+...=+.++...+ ..-...+++|+|+|.|+.++..++.. . .+
T Consensus 38 ~~~~~~~V~YpA~~~~~-------~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~ 110 (179)
T PF01083_consen 38 TSVAVQGVEYPASLGPN-------SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVAD 110 (179)
T ss_dssp CEEEEEE--S---SCGG-------SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHH
T ss_pred CeeEEEecCCCCCCCcc-------cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhh
Confidence 34566667776332110 11 12333334444444 33344699999999999999988877 2 25
Q ss_pred ccceeEEecCCC
Q 024681 110 LFTKLILIGASP 121 (264)
Q Consensus 110 ~v~~~vl~~~~~ 121 (264)
+|.++++++-+.
T Consensus 111 ~I~avvlfGdP~ 122 (179)
T PF01083_consen 111 RIAAVVLFGDPR 122 (179)
T ss_dssp HEEEEEEES-TT
T ss_pred hEEEEEEecCCc
Confidence 788999998653
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0048 Score=43.39 Aligned_cols=68 Identities=13% Similarity=-0.066 Sum_probs=41.1
Q ss_pred hc-CCceEEEecCCCCCCCC------CCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecChhHHHHHHHHHhC
Q 024681 39 YL-NHHRVIMFDLVCAGSVN------PDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 39 ~l-~g~~v~~~d~~g~G~s~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
.+ .-.+|+++=+|=..... ......... -..|..+....++++.+. ++++|+|||.|+.+..++..++
T Consensus 41 ~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~-ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 41 AFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDL-AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhcCCccccChhhcchhhhhhccCcchhHHHHHh-hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 44 66788888777332111 100000111 134455555566666654 5999999999999999998764
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.004 Score=48.47 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=22.8
Q ss_pred HHHHHHHHHhCCC--eEEEEecChhHHHHHHHHHh
Q 024681 74 DDLLNILDTLGVN--RCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 74 ~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 106 (264)
..+..+++..... ++++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344444433333 49999999999999988854
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.006 Score=46.84 Aligned_cols=35 Identities=20% Similarity=0.397 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCCC--eEEEEecChhHHHHHHHHHh
Q 024681 72 YVDDLLNILDTLGVN--RCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 106 (264)
..+.+..+++....+ ++++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 445555566555433 59999999999999887764
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.014 Score=45.43 Aligned_cols=37 Identities=14% Similarity=0.294 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhC----CCeEEEEecChhHHHHHHHHHh
Q 024681 70 DAYVDDLLNILDTLG----VNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+++.+.+..+++... ..++.+.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 445556666665542 1379999999999999887753
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0095 Score=47.53 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.+....+..+++.....++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345666677777666679999999999999988874
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.012 Score=45.96 Aligned_cols=36 Identities=19% Similarity=0.367 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCC--CeEEEEecChhHHHHHHHHHh
Q 024681 71 AYVDDLLNILDTLGV--NRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
++.+.+..+++.... .+|.+.|||+||.+|+..|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 344455566665443 269999999999999888753
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.019 Score=43.93 Aligned_cols=38 Identities=26% Similarity=0.445 Sum_probs=29.8
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGASP 121 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~ 121 (264)
+.+|+.|+|||+|+.+...+.....+ .|+.+++++++.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 55789999999999998876654433 488999998753
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.14 Score=39.45 Aligned_cols=60 Identities=15% Similarity=0.076 Sum_probs=45.2
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecCCCCcccc-cChhcHHHHHHHHhc
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKIEGHLPHL-SAPAIVGPVIRRALS 263 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 263 (264)
..+.+.+.+..|.++|....+++.+..... ++.+-+.++-|..+. ..|....+...+|++
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~ 288 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLR 288 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHH
Confidence 457788999999999999988886554332 455566678886655 468888888888875
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.15 Score=41.95 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=18.1
Q ss_pred CeEEEEecChhHHHHHHHHHh
Q 024681 86 NRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999877664
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.019 Score=38.70 Aligned_cols=111 Identities=13% Similarity=0.118 Sum_probs=62.2
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHH------Hhhhhc-C-CceEEEecCCCCCCCCC-CCCCCcccchHHHHHHHHH
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQ------RILPYL-N-HHRVIMFDLVCAGSVNP-DYFDFRRYTTLDAYVDDLL 77 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~------~~~~~l-~-g~~v~~~d~~g~G~s~~-~~~~~~~~~~~~~~~~~~~ 77 (264)
.+.+...|.+..+||+++--++.-..|. .++..+ . ....++++- -...+- .... ......+....--.
T Consensus 16 dMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~g--ldsESf~a~h~-~~adr~~rH~Ayer 92 (227)
T COG4947 16 DMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSG--LDSESFLATHK-NAADRAERHRAYER 92 (227)
T ss_pred hhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEecc--cchHhHhhhcC-CHHHHHHHHHHHHH
Confidence 3455667775445666665555544443 234444 3 334455442 211110 0000 00011222223333
Q ss_pred HHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 78 NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 78 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
-++++.-.....+-|.||||..|..+.-++|+...++|.+++.
T Consensus 93 Yv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 93 YVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred HHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 3444444456778899999999999999999999999999875
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.017 Score=46.10 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhCC--CeEEEEecChhHHHHHHHHHh
Q 024681 71 AYVDDLLNILDTLGV--NRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
++.+++..+++.... .++++.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344455555554432 268999999999999887764
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.017 Score=39.86 Aligned_cols=61 Identities=15% Similarity=0.142 Sum_probs=45.5
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHH---HcCCC-ceEEEecCCCCcccccCh---hcHHHHHHHHhcC
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQR---HLGGR-NTVELLKIEGHLPHLSAP---AIVGPVIRRALSR 264 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~---~~~~~-~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 264 (264)
++++|-|-|+.|.++.........+ .+|.. ...++.+++||+-...-+ +++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 4677889999999998766555444 44443 567788999998666544 7889999999863
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.018 Score=46.26 Aligned_cols=36 Identities=14% Similarity=0.362 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHhCC-----CeEEEEecChhHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTLGV-----NRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~ 105 (264)
+++.+.+..+++.... .++.+.|||+||.+|+.+|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3444555566655432 48999999999999998875
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.02 Score=45.90 Aligned_cols=36 Identities=14% Similarity=0.315 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhC----CCeEEEEecChhHHHHHHHHHh
Q 024681 71 AYVDDLLNILDTLG----VNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 71 ~~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+..+++..+++... ..++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 45566666666553 1369999999999999887753
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.026 Score=45.16 Aligned_cols=36 Identities=14% Similarity=0.337 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhCC-----CeEEEEecChhHHHHHHHHHh
Q 024681 71 AYVDDLLNILDTLGV-----NRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
++.+.+..+++.... .++.+.|||+||.+|..+|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344445555554421 379999999999999887753
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.015 Score=32.31 Aligned_cols=19 Identities=21% Similarity=0.476 Sum_probs=11.1
Q ss_pred CCceEEEecCCCCChhhHH
Q 024681 16 GDRILVLAHGFGTDQSAWQ 34 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~ 34 (264)
.+|+|++.||+.+++..|-
T Consensus 42 ~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp T--EEEEE--TT--GGGGC
T ss_pred CCCcEEEECCcccChHHHH
Confidence 4689999999999998873
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.026 Score=45.31 Aligned_cols=35 Identities=17% Similarity=0.353 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhC-----C-CeEEEEecChhHHHHHHHHH
Q 024681 71 AYVDDLLNILDTLG-----V-NRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 71 ~~~~~~~~~~~~~~-----~-~~~~l~G~S~Gg~~a~~~a~ 105 (264)
++.+.+..+++... . .++.+.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 44455555555442 1 36999999999999988774
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.05 Score=41.97 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 70 DAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4666777777777776689999999999999887764
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=94.29 E-value=2.4 Score=34.31 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=65.4
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHH--HhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQ--RILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~--~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.++|-..|+ .+|..|++-|+-. ++-|. .+++.|.-=-.+.-|.|--|.+=-. ....| -+.+.+-+...++.|
T Consensus 278 i~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~PfLL~~DpRleGGaFYl--Gs~ey--E~~I~~~I~~~L~~L 352 (511)
T TIGR03712 278 FIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLGAPFLLIGDPRLEGGAFYL--GSDEY--EQGIINVIQEKLDYL 352 (511)
T ss_pred eEEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcCCCeEEeeccccccceeee--CcHHH--HHHHHHHHHHHHHHh
Confidence 455656677 5567799998765 44443 3445552223345577766655211 01112 234555566777888
Q ss_pred CCC--eEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 84 GVN--RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 84 ~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
+-+ .++|-|-|||..=|+.++++.. ..++|+--|
T Consensus 353 gF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKP 388 (511)
T TIGR03712 353 GFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKP 388 (511)
T ss_pred CCCHHHeeeccccccchhhhhhcccCC--CceEEEcCc
Confidence 764 7999999999999999998753 355555554
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.34 Score=35.04 Aligned_cols=63 Identities=13% Similarity=0.005 Sum_probs=37.0
Q ss_pred CceEEEecCCCC-CC-CCCCCCCCcccchHHHHHHHHHHHHHHh--CCCeEEEEecChhHHHHHHHHHh
Q 024681 42 HHRVIMFDLVCA-GS-VNPDYFDFRRYTTLDAYVDDLLNILDTL--GVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 42 g~~v~~~d~~g~-G~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
|+.+..+++|.. +- +..... ..+ .+..+=++.+.+.++.. ..++++++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~-t~~-~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSP-TYD-ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCC-ccc-hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 566777777751 11 000000 001 13555556666666552 23689999999999999876654
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.5 Score=35.68 Aligned_cols=102 Identities=17% Similarity=0.151 Sum_probs=67.9
Q ss_pred CCceEEEecCCCCChh----hHHHhhh-----------hcCCceEEEecCC-CCCCCCCCCCCCccc-chHHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQS----AWQRILP-----------YLNHHRVIMFDLV-CAGSVNPDYFDFRRY-TTLDAYVDDLLN 78 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~----~~~~~~~-----------~l~g~~v~~~d~~-g~G~s~~~~~~~~~~-~~~~~~~~~~~~ 78 (264)
.+|..+.+.|.++.+. .|+.+-+ .|+.-.++.+|-| |.|.|-... ...| .+..+.+.|+.+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg--~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDG--SSAYTTNNKQIALDLVE 107 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecC--cccccccHHHHHHHHHH
Confidence 4578889988766543 3444333 1145578888887 788873321 1233 257889999999
Q ss_pred HHHHh-------CCCeEEEEecChhHHHHHHHHHhCCC---------ccceeEEecC
Q 024681 79 ILDTL-------GVNRCAYVGHSVSAMIGLLASIRRPD---------LFTKLILIGA 119 (264)
Q Consensus 79 ~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p~---------~v~~~vl~~~ 119 (264)
+++.+ +..|++|+.-|+||-+|..++...-+ .+.+++|-++
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 99865 33589999999999999887754322 3456666665
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.18 Score=40.99 Aligned_cols=85 Identities=15% Similarity=0.154 Sum_probs=56.5
Q ss_pred hhhhc-CCceEEEecCCCCCCCCC---CCCCCc-------ccchHHHHHHHHHHHHHHh---CCCeEEEEecChhHHHHH
Q 024681 36 ILPYL-NHHRVIMFDLVCAGSVNP---DYFDFR-------RYTTLDAYVDDLLNILDTL---GVNRCAYVGHSVSAMIGL 101 (264)
Q Consensus 36 ~~~~l-~g~~v~~~d~~g~G~s~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~ 101 (264)
+...+ +||.++.-|- ||..+.. ...... .|..+...+.--+++++.. ..+.-+..|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 45567 9999999995 6655532 111100 0112222223333444433 345788999999999999
Q ss_pred HHHHhCCCccceeEEecCCC
Q 024681 102 LASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 102 ~~a~~~p~~v~~~vl~~~~~ 121 (264)
..|+++|+..++++.-+|+.
T Consensus 131 ~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHhChhhcCeEEeCCchH
Confidence 99999999999999999854
|
It also includes several bacterial homologues of unknown function. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.31 Score=39.95 Aligned_cols=53 Identities=23% Similarity=0.423 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhC---CCeEEEEecChhHHHHHHHHHh-----CCC------ccceeEEecCCC
Q 024681 69 LDAYVDDLLNILDTLG---VNRCAYVGHSVSAMIGLLASIR-----RPD------LFTKLILIGASP 121 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~---~~~~~l~G~S~Gg~~a~~~a~~-----~p~------~v~~~vl~~~~~ 121 (264)
+..-...+.+.+...+ .++++.+||||||.++=.+... .|+ .-.+++.++.+.
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 4444444555454443 3589999999999888554332 232 346677777653
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.56 Score=34.77 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=24.9
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
...++.+-|||+||.+|..+..++. +..+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3358999999999999999888774 334444444
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.56 Score=34.77 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=24.9
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
...++.+-|||+||.+|..+..++. +..+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3358999999999999999888774 334444444
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.4 Score=39.09 Aligned_cols=62 Identities=11% Similarity=0.004 Sum_probs=46.0
Q ss_pred cccCEEEEecCCCCCcchhhHHHHHHHc----CC-------CceEEEecCCCCccccc--ChhcHHHHHHHHhcC
Q 024681 203 VRVPCVIIQTSKDVSVPVSVAEYLQRHL----GG-------RNTVELLKIEGHLPHLS--APAIVGPVIRRALSR 264 (264)
Q Consensus 203 i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~ 264 (264)
-.-.+++.||..|.++|+..+..+++++ .. -.++..+||.+|+.--. .+-.....|.+|+++
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 3578999999999999987766555443 21 16899999999975544 345678888888764
|
It also includes several bacterial homologues of unknown function. |
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=89.36 E-value=3.9 Score=43.07 Aligned_cols=97 Identities=12% Similarity=-0.025 Sum_probs=69.7
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeEEEEecC
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRCAYVGHS 94 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S 94 (264)
.+.+++.|........+..+...+ .+..++.+..++.-.... ...+++.++....+.+.+.. ..+..+.|+|
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~~------~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s 3765 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDGW------QDTSLQAMAVQYADYILWQQAKGPYGLLGWS 3765 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccccC------CccchHHHHHHHHHHHHHhccCCCeeeeeee
Confidence 356999999888888888888888 888899888766532221 11147777777777776654 3589999999
Q ss_pred hhHHHHHHHHHh---CCCccceeEEecC
Q 024681 95 VSAMIGLLASIR---RPDLFTKLILIGA 119 (264)
Q Consensus 95 ~Gg~~a~~~a~~---~p~~v~~~vl~~~ 119 (264)
+||.++..++.. ..+.+.-+.+++.
T Consensus 3766 ~g~~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3766 LGGTLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred cchHHHHHHHHHHHHcCCceeEEEEEec
Confidence 999999887664 4455666666654
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.15 E-value=1.4 Score=36.35 Aligned_cols=95 Identities=19% Similarity=0.190 Sum_probs=52.1
Q ss_pred eEEEecCCCCCh---hh----HHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH---HhCC--C
Q 024681 19 ILVLAHGFGTDQ---SA----WQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD---TLGV--N 86 (264)
Q Consensus 19 ~vv~~hG~~~~~---~~----~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~ 86 (264)
.|+-+||.|.-+ .. .+.++..| +..|+.+|+---.+..-+ . -.++..-...-+++ .+|. +
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL-~cPiiSVdYSLAPEaPFP----R---aleEv~fAYcW~inn~allG~TgE 469 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQAL-GCPIISVDYSLAPEAPFP----R---ALEEVFFAYCWAINNCALLGSTGE 469 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHh-CCCeEEeeeccCCCCCCC----c---HHHHHHHHHHHHhcCHHHhCcccc
Confidence 778889977422 22 23344444 788999997433222111 1 13333322222332 2332 6
Q ss_pred eEEEEecChhHHHHHHHHHh----CCCccceeEEecCCC
Q 024681 87 RCAYVGHSVSAMIGLLASIR----RPDLFTKLILIGASP 121 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~ 121 (264)
+|+++|-|.||.+.+..|.+ .-...+++++.-++.
T Consensus 470 riv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 470 RIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred eEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 99999999999765544433 222346788777643
|
|
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=88.55 E-value=4.2 Score=25.19 Aligned_cols=82 Identities=16% Similarity=0.111 Sum_probs=53.1
Q ss_pred hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhH--HHHHHHHHhC
Q 024681 32 AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSA--MIGLLASIRR 107 (264)
Q Consensus 32 ~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg--~~a~~~a~~~ 107 (264)
.|..+.+.+ .+|..=.+.++..|.+-....... ..+.=...+..+++.....+++|+|-|--. -+-..+|.++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~---~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSG---AEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCC---chhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 344455555 567766677777766532211111 112445567778888887899999988766 3445678899
Q ss_pred CCccceeEE
Q 024681 108 PDLFTKLIL 116 (264)
Q Consensus 108 p~~v~~~vl 116 (264)
|++|.++.+
T Consensus 89 P~~i~ai~I 97 (100)
T PF09949_consen 89 PGRILAIYI 97 (100)
T ss_pred CCCEEEEEE
Confidence 999998865
|
|
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=87.92 E-value=2.2 Score=34.67 Aligned_cols=40 Identities=23% Similarity=0.317 Sum_probs=30.7
Q ss_pred hCCCeEEEEecChhHHHHHHHHHh-----CCCccceeEEecCCCC
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIR-----RPDLFTKLILIGASPR 122 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~v~~~vl~~~~~~ 122 (264)
.|.+||.|+|+|+|+.+...+... .-..|..+++++++..
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 367899999999999998765542 2246888999998644
|
|
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=87.81 E-value=4 Score=32.13 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=24.6
Q ss_pred CCeEEEEecChhHHHHHHH----HHhCCCccceeEEecCC
Q 024681 85 VNRCAYVGHSVSAMIGLLA----SIRRPDLFTKLILIGAS 120 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~----a~~~p~~v~~~vl~~~~ 120 (264)
.++++|.|.|.||.-++.. +...|..++-..+.+++
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 4689999999999888764 34566545445555543
|
|
| >PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 | Back alignment and domain information |
|---|
Probab=83.75 E-value=0.97 Score=34.79 Aligned_cols=30 Identities=30% Similarity=0.473 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
+.++++..|+++-.++|||+|=+.|+.++.
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 345567778899999999999988887654
|
3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A .... |
| >smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=83.34 E-value=1.8 Score=32.96 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=24.1
Q ss_pred HHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 77 LNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
.++++..|+++-.++|||+|-..|+.++..
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 345567788999999999999988876643
|
|
| >TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit | Back alignment and domain information |
|---|
Probab=82.78 E-value=2 Score=32.68 Aligned_cols=30 Identities=20% Similarity=0.039 Sum_probs=23.9
Q ss_pred HHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 77 LNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
.++++..++++..++|||+|=..|+.++..
T Consensus 67 ~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 67 WRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 455566788999999999999888877643
|
Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group. |
| >cd07198 Patatin Patatin-like phospholipase | Back alignment and domain information |
|---|
Probab=80.51 E-value=3.2 Score=28.64 Aligned_cols=33 Identities=21% Similarity=0.186 Sum_probs=25.6
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+...+++.++..-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344455557778889999999999999988654
|
Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family. |
| >PRK10279 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=80.49 E-value=2.7 Score=32.08 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=26.7
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+...+++.++..-.+.|.|+|+.++..+|....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 445556678888899999999999999997654
|
|
| >cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7 | Back alignment and domain information |
|---|
Probab=80.47 E-value=2.9 Score=32.01 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=26.5
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHHHHHHhC
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
-+...+++.++..-.++|.|+|+.++..+|...
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 345556666888888999999999999998764
|
Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 264 | ||||
| 4ih4_A | 267 | Crystal Structure Of Arabidopsis Dwarf14 Orthologue | 1e-122 | ||
| 4dnp_A | 269 | Crystal Structure Of Dad2 Length = 269 | 1e-120 | ||
| 4dnq_A | 269 | Crystal Structure Of Dad2 S96a Mutant Length = 269 | 1e-119 | ||
| 4iha_A | 268 | Crystal Structure Of Rice Dwarf14 (d14) In Complex | 1e-117 | ||
| 3w04_A | 266 | Crystal Structure Of Oryza Sativa Dwarf14 (d14) Len | 1e-117 | ||
| 4hrx_A | 288 | Crystal Structure Of Kai2 Length = 288 | 2e-84 | ||
| 4ih1_A | 270 | Crystal Structure Of Karrikin Insensitive 2 (kai2) | 2e-84 | ||
| 3w06_A | 272 | Crystal Structure Of Arabidopsis Thaliana Dwarf14 L | 3e-84 | ||
| 1wom_A | 271 | Crystal Structure Of Rsbq Length = 271 | 1e-46 | ||
| 3qvm_A | 282 | The Structure Of Olei00960, A Hydrolase From Oleisp | 9e-35 | ||
| 3om8_A | 266 | The Crystal Structure Of A Hydrolase From Pseudomon | 3e-08 | ||
| 2xua_A | 266 | Crystal Structure Of The Enol-Lactonase From Burkho | 3e-06 | ||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 5e-06 | ||
| 2ock_A | 254 | Crystal Structure Of Valacyclovir Hydrolase D123n M | 7e-06 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 8e-06 | ||
| 2ocg_A | 254 | Crystal Structure Of Human Valacyclovir Hydrolase L | 8e-06 | ||
| 1ehy_A | 294 | X-Ray Structure Of The Epoxide Hydrolase From Agrob | 1e-05 | ||
| 2ocl_A | 254 | Crystal Structure Of Valacyclovir Hydrolase S122a M | 2e-05 | ||
| 3b12_A | 304 | Crystal Structure Of The Fluoroacetate Dehalogenase | 6e-05 | ||
| 1y37_A | 304 | Structure Of Fluoroacetate Dehalogenase From Burkho | 1e-04 | ||
| 4b9a_A | 301 | Structure Of A Putative Epoxide Hydrolase From Pseu | 3e-04 | ||
| 3ans_A | 336 | Human Soluble Epoxide Hydrolase In Complex With A S | 7e-04 | ||
| 3pdc_A | 344 | Crystal Structure Of Hydrolase Domain Of Human Solu | 8e-04 |
| >pdb|4IH4|A Chain A, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14 Length = 267 | Back alignment and structure |
|
| >pdb|4DNP|A Chain A, Crystal Structure Of Dad2 Length = 269 | Back alignment and structure |
|
| >pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|4IHA|A Chain A, Crystal Structure Of Rice Dwarf14 (d14) In Complex With A Gr24 Hydrolysis Intermediate Length = 268 | Back alignment and structure |
|
| >pdb|3W04|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14) Length = 266 | Back alignment and structure |
|
| >pdb|4HRX|A Chain A, Crystal Structure Of Kai2 Length = 288 | Back alignment and structure |
|
| >pdb|4IH1|A Chain A, Crystal Structure Of Karrikin Insensitive 2 (kai2) From Arabidopsis Thaliana Length = 270 | Back alignment and structure |
|
| >pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like (atd14l) Length = 272 | Back alignment and structure |
|
| >pdb|1WOM|A Chain A, Crystal Structure Of Rsbq Length = 271 | Back alignment and structure |
|
| >pdb|3QVM|A Chain A, The Structure Of Olei00960, A Hydrolase From Oleispira Antarctica Length = 282 | Back alignment and structure |
|
| >pdb|3OM8|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Aeruginosa Pa01 Length = 266 | Back alignment and structure |
|
| >pdb|2XUA|A Chain A, Crystal Structure Of The Enol-Lactonase From Burkholderia Xenovorans Lb400 Length = 266 | Back alignment and structure |
|
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant Length = 254 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase Length = 254 | Back alignment and structure |
|
| >pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From Agrobacterium Radiobacter Ad1 Length = 294 | Back alignment and structure |
|
| >pdb|2OCL|A Chain A, Crystal Structure Of Valacyclovir Hydrolase S122a Mutant Length = 254 | Back alignment and structure |
|
| >pdb|3B12|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase D104 Mutant From Burkholderia Sp. Fa1 In Complex With Fluoroacetate Length = 304 | Back alignment and structure |
|
| >pdb|1Y37|A Chain A, Structure Of Fluoroacetate Dehalogenase From Burkholderia Sp. Fa1 Length = 304 | Back alignment and structure |
|
| >pdb|4B9A|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas Aeruginosa. Length = 301 | Back alignment and structure |
|
| >pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A Synthetic Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor Length = 344 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 264 bits (677), Expect = 4e-89
Identities = 99/265 (37%), Positives = 150/265 (56%), Gaps = 4/265 (1%)
Query: 1 MGDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPD 59
M +L HV+V G+G ++ A GFG DQS W + P HRVI+FD V +G +
Sbjct: 4 MTSILSRNHVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLR 63
Query: 60 YFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119
+D RY TLD Y D+L++ + L + +VGHSV A+IG+LASIRRP+LF+ L+++G
Sbjct: 64 AYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGP 123
Query: 120 SPRFLND-EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV-PAAVREFSRTLF 177
SP +LND +Y+GGFEE ++ + ME NY WA +A + P E
Sbjct: 124 SPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFC 183
Query: 178 NMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237
+ P I+ +K F +D R L V VP +I+Q + D+ P +V +Y+ +HL ++++
Sbjct: 184 STDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPY-SSLK 242
Query: 238 LLKIEGHLPHLSAPAIVGPVIRRAL 262
++ GH PH+S P +I L
Sbjct: 243 QMEARGHCPHMSHPDETIQLIGDYL 267
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 261 bits (669), Expect = 8e-88
Identities = 82/263 (31%), Positives = 146/263 (55%), Gaps = 4/263 (1%)
Query: 1 MGDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPD 59
D+++ ++ + G G++ ++LAHGFG DQ+ W+ +LP L VI+FD V +G + +
Sbjct: 12 KEDVVKRNNINITGGGEKTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLE 71
Query: 60 YFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119
F +RY++L+ Y D+ IL L + + +GHSVS++I +AS D + + +I
Sbjct: 72 SFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICP 131
Query: 120 SPRFLN-DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV-PAAVREFSRTLF 177
SP F+N DY GGFE +++++ M+ NY WA APL +GA + E S +
Sbjct: 132 SPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFC 191
Query: 178 NMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237
P ++ +K F +D R +L + P +I Q++KD V +Y+ ++ + +E
Sbjct: 192 TTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPN-SQLE 250
Query: 238 LLKIEGHLPHLSAPAIVGPVIRR 260
L++ EGH H++ ++ P++
Sbjct: 251 LIQAEGHCLHMTDAGLITPLLIH 273
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 3e-44
Identities = 46/264 (17%), Positives = 95/264 (35%), Gaps = 19/264 (7%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFRR 65
+ + G G+ LVL HG+G + W+ I L +H + + DL G S
Sbjct: 4 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSL-- 61
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
D+ + ++ ++G S+ ++ ++ P+ L+ + +SP F
Sbjct: 62 --------ADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSA 113
Query: 126 DEDYHGGFEEAEIDKVFRAMEANYEAWAYGY-APLAVGADVPAAVREFSRTLFNMRPDIS 184
+++ G + + + + + + + A +G + + P
Sbjct: 114 RDEWPGIKPDV-LAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPE 172
Query: 185 LFVS----KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240
+ V + + DLR L V +P + + D VP V L + + +
Sbjct: 173 VDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIFA 231
Query: 241 IEGHLPHLSAPAIVGPVIRRALSR 264
H P +S PA ++ R
Sbjct: 232 KAAHAPFISHPAEFCHLLVALKQR 255
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-37
Identities = 46/265 (17%), Positives = 89/265 (33%), Gaps = 38/265 (14%)
Query: 8 LHVRVVGTGD--RILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAG-SVNPDYFDFR 64
LH VG L+ HG G + + + YL + I+ DL G S
Sbjct: 5 LHYVHVGNKKSPNTLLFVHGSGCNLKIFGELEKYLEDYNCILLDLKGHGESKGQCPS--- 61
Query: 65 RYTTLDAYVDDLLNILDTLGV----NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120
T+ Y+D++ N + V +G+S+ I L ++++ K++ +
Sbjct: 62 ---TVYGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVALKKLPNVRKVVSLSGG 118
Query: 121 PRFLN-DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNM 179
RF D+D+ ++D + + S F
Sbjct: 119 ARFDKLDKDFMEKIYHNQLDNNYLLE------------------CIGGIDNPLSEKYFET 160
Query: 180 ---RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN-T 235
PDI + DL L + +P I ++ V +E +++ + N
Sbjct: 161 LEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV--ENSE 218
Query: 236 VELLKIEGHLPHLSAPAIVGPVIRR 260
+++ + H + V I+
Sbjct: 219 LKIFETGKHFLLVVNAKGVAEEIKN 243
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-36
Identities = 46/269 (17%), Positives = 93/269 (34%), Gaps = 25/269 (9%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLV-CAGSVNPDYFDFRR 65
+ G G + V H + +H+ V + +L C S + +
Sbjct: 15 FEYFLKGEGPPLCVT-HLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAK--NDSE 71
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIG--ASPRF 123
Y+ + DL I + L +N+ + GHS M+ L+ + + TK+I+ G AS +
Sbjct: 72 YSM-TETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEY 130
Query: 124 LNDEDYHGGFEEAEIDKVFRAMEANYE-----------AWAYGYAPLAVGADVPAAVREF 172
+ +D + + +++ M A + + + + A++
Sbjct: 131 ASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLP 190
Query: 173 SRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232
+ + ++ F D D+R L V++P I DV P + + +
Sbjct: 191 NSGKT-VGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPN 249
Query: 233 RNTVELLKIE--GHLPHLSAPAIVGPVIR 259
L K E H P + +
Sbjct: 250 ---ATLTKFEESNHNPFVEEIDKFNQFVN 275
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 7e-35
Identities = 61/259 (23%), Positives = 97/259 (37%), Gaps = 19/259 (7%)
Query: 8 LHVRVVGTGDR-ILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFR 64
L R+ G ++ +L L++ GT W LP L H RV+ +D G S P
Sbjct: 17 LAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPP----G 72
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
YT L +D+L +LD L V R ++G S+ ++G ++ P +L+L S
Sbjct: 73 PYT-LARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLG 131
Query: 125 NDEDYHGGFEEAEIDKVFRA--MEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
+ I V +A M + + P A+ V F L
Sbjct: 132 PAAQWD-----ERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRH 186
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
V DTDLR L + P ++I + D S E + + G L+ +
Sbjct: 187 GLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAG---ARLVTLP 243
Query: 243 -GHLPHLSAPAIVGPVIRR 260
HL ++ P +
Sbjct: 244 AVHLSNVEFPQAFEGAVLS 262
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 2e-33
Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 18/263 (6%)
Query: 8 LHVRVVGTGDR---ILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFD 62
LH R+ G +VL++ GTD S W + L H RV+ +D G S P
Sbjct: 14 LHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPK--- 70
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
YT ++ D+L ++DTL + R + G S+ + G+ + R D ++ L + R
Sbjct: 71 -GPYT-IEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAAR 128
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
+ E + +A + + +A W + + + P + + +
Sbjct: 129 IGSPEVWVPRAVKARTEGMHALADAVLPRW---FTADYMERE-PVVLAMIRDVFVHTDKE 184
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
+ + DLR ++VP ++I + D++ + L + + G ++++
Sbjct: 185 GYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAGA---RYVELD 241
Query: 243 -GHLPHLSAPAIVGPVIRRALSR 264
H+ ++ + L+
Sbjct: 242 ASHISNIERADAFTKTVVDFLTE 264
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-33
Identities = 49/268 (18%), Positives = 92/268 (34%), Gaps = 14/268 (5%)
Query: 2 GDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLV-CAGSVNPD 59
G + +L ++VL G G S W L L ++V+ +D + +
Sbjct: 1 GHMKLSLSPPPYADAP-VVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTL 59
Query: 60 YFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119
D+ ++ +L L G+ A VGH++ A++G+ ++ P T LI +
Sbjct: 60 AEDY----SIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNG 115
Query: 120 SPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNM 179
R + F+ E +A EA P A +
Sbjct: 116 WLRI--NAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAH 173
Query: 180 RPDISLFVS--KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL-GGRNTV 236
+ + + D +R P II S D+ VP + + L L +
Sbjct: 174 FQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQ--K 231
Query: 237 ELLKIEGHLPHLSAPAIVGPVIRRALSR 264
++ GH +++ P ++ L+
Sbjct: 232 MVMPYGGHACNVTDPETFNALLLNGLAS 259
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 3e-32
Identities = 50/265 (18%), Positives = 88/265 (33%), Gaps = 17/265 (6%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAW--QRILPYL-NHHRVIMFDLVCAG-SVNPDYFDF 63
L GTGD +V G G W ++ +L +R I FD G + N + F
Sbjct: 35 LAYDDNGTGDP-VVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGF-- 91
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123
T V D +++TL + VG S+ A I + P+L + +L+ R
Sbjct: 92 ----TTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRL 147
Query: 124 LNDEDYHGGFEEAEIDKVFRAMEANY--EAWAYGYAPLAVGADVPAAVREFSRTLFNMRP 181
+ E D + ++ + DV +++ ++
Sbjct: 148 DRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKS 207
Query: 182 DISLFVSKTVF-DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL-GGRNTVELL 239
L T+ + P ++I + DV P + + L GR +
Sbjct: 208 TPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGR--YLQI 265
Query: 240 KIEGHLPHLSAPAIVGPVIRRALSR 264
GHL P V + + +
Sbjct: 266 PDAGHLGFFERPEAVNTAMLKFFAS 290
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 8e-32
Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 24/272 (8%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYFDFR 64
L+ GTG + +VL HGF +W+R L +RVI +D G S P
Sbjct: 15 LYYEDHGTG-QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT----T 69
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSV-SAMIGLLASIRRPDLFTKLILIGASPRF 123
Y D + DL +L+TL + VG S + + S K+ + + F
Sbjct: 70 GYD-YDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPF 128
Query: 124 LN--DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPL------AVGADVPAAVREFSRT 175
L D++ G + D + A++A+ A+ G+ +G + S
Sbjct: 129 LLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWN 188
Query: 176 LFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV-SVAEYLQRHLGGRN 234
+ + T + TD R + + VP +I+ + D ++P+ + A + L
Sbjct: 189 TAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPS-- 246
Query: 235 TVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
E +++E H + V + L++
Sbjct: 247 -AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 8e-32
Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 31/261 (11%)
Query: 8 LHVRVVGTGDR-ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYFDF 63
LH + G GD +L+L G+ ++ + L L V+ +D G S PD
Sbjct: 14 LHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD---- 69
Query: 64 RRYT--TLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
R + + D ++++ L + + +G S + L+A+ + P K+++ GA+
Sbjct: 70 RDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANA 129
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP 181
+ E++ I + R + E L ++ + +
Sbjct: 130 --------YVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFK- 180
Query: 182 DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241
R +L V+ P +I+ KD VP A+++ +H+ G L +
Sbjct: 181 -------HLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKG---SRLHLM 230
Query: 242 E--GHLPHLSAPAIVGPVIRR 260
H HL +
Sbjct: 231 PEGKHNLHLRFADEFNKLAED 251
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 9e-32
Identities = 57/272 (20%), Positives = 104/272 (38%), Gaps = 24/272 (8%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYFDFR 64
L+ GTG +VL HGF +W+R L +RVI +D G S P
Sbjct: 16 LYYEDHGTG-VPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT----T 70
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSV-SAMIGLLASIRRPDLFTKLILIGASPRF 123
Y D + DL +L+TL + VG S+ + + S + + + F
Sbjct: 71 GYD-YDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPF 129
Query: 124 LN--DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPL------AVGADVPAAVREFSRT 175
L D++ G + D + A++A+ A+ G+ +G + S
Sbjct: 130 LLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWN 189
Query: 176 LFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV-SVAEYLQRHLGGRN 234
+ + T + TD R + + VP +I+ + D ++P+ + A + L
Sbjct: 190 TAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPS-- 247
Query: 235 TVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
E +++E H + V + L++
Sbjct: 248 -AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 278
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 3e-31
Identities = 53/268 (19%), Positives = 88/268 (32%), Gaps = 18/268 (6%)
Query: 8 LHVRVVGTGDRI-LVLAHGF-GTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFR 64
L+V VG + L + HG G + + L RV+ FD +G D R
Sbjct: 15 LYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPR 74
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIG--ASPR 122
+T DA V+D L + + LGV R + H A++ L R P ++L P
Sbjct: 75 LFTV-DALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPW 133
Query: 123 FLNDEDYHGGFEEA-EIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSR---TLFN 178
G + ++ + E A + L E+ +
Sbjct: 134 LAARLAEAAGLAPLPDPEENLKEALKREEPKAL-FDRLMFPTPRGRMAYEWLAEGAGILG 192
Query: 179 MRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238
F+ ++ D L R P ++ +D + E R L +
Sbjct: 193 SDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTSYPYAEEVASR-LRAP----I 247
Query: 239 LKIE--GHLPHLSAPAIVGPVIRRALSR 264
+ GH + AP + AL+
Sbjct: 248 RVLPEAGHYLWIDAPEAFEEAFKEALAA 275
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 9e-31
Identities = 48/266 (18%), Positives = 84/266 (31%), Gaps = 19/266 (7%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFRR 65
+ V T +LV HGF +D + + +++ VI DL G + +
Sbjct: 8 FYEANVETNQ-VLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETW-- 64
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
D L ILD G+S+ + L +I + LIL SP
Sbjct: 65 --NFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKE 122
Query: 126 DED-YHGGFEEAEIDKVFRA--MEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
+ + + KV +E W + + + + P
Sbjct: 123 EANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPH 182
Query: 183 ---ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELL 239
+L T +L L ++VP +I+ D V +A+ + + +
Sbjct: 183 KMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYD-EKFVQIAKKMANLIPN---SKCK 238
Query: 240 KIE--GHLPHLSAPAIVGPVIRRALS 263
I GH H+ +I L
Sbjct: 239 LISATGHTIHVEDSDEFDTMILGFLK 264
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 3e-30
Identities = 54/265 (20%), Positives = 94/265 (35%), Gaps = 18/265 (6%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYFDFR 64
++ GTG + +VL HG+ +W+ +P L +RVI +D G S P
Sbjct: 19 IYYEDHGTG-KPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPW----- 72
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL-LASIRRPDLFTKLILIGASPRF 123
D + DL +L+ L + VG S+ S D K++ GA P +
Sbjct: 73 EGYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPY 132
Query: 124 LN--DEDYHGGFEEAEIDKVFRAMEANYEAWAYG-----YAPLAVGADVPAAVREFSRTL 176
L ++ G ++A I+ + + A+ +A V + R ++ +
Sbjct: 133 LYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDI 192
Query: 177 FNMRPDISLF-VSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT 235
TD R L +P +II D +VP + L +
Sbjct: 193 AAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSK 252
Query: 236 VELLKIEGHLPHLSAPAIVGPVIRR 260
V L+K H + + +
Sbjct: 253 VALIKGGPHGLNATHAKEFNEALLL 277
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 3e-30
Identities = 45/257 (17%), Positives = 82/257 (31%), Gaps = 15/257 (5%)
Query: 8 LHVRVVGTGDRI-LVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLV-CAGSVNPDYFDFR 64
HV G D LVL HG + W + + +R D++ P+
Sbjct: 57 THVIASGPEDAPPLVLLHGALFSSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPE----N 112
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
T Y + LL++ D LG+ + +G S+ + + +R P+ ++ + F
Sbjct: 113 VSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETF- 171
Query: 125 NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDIS 184
+H F + + + W + + R
Sbjct: 172 --LPFHHDFYKYALGLTASNGVETFLNWMM-NDQNVLHPIFVKQFKAGVMWQDGSRNPNP 228
Query: 185 LFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSV-PVSVAEYLQRHLGGRNTVELLKIEG 243
TD L RVP +++ +V P S + E++K G
Sbjct: 229 NADGFPYVFTDEE--LRSARVPILLLLGEHEVIYDPHSALHRASSFVPD-IEAEVIKNAG 285
Query: 244 HLPHLSAPAIVGPVIRR 260
H+ + P V + R
Sbjct: 286 HVLSMEQPTYVNERVMR 302
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 4e-29
Identities = 51/274 (18%), Positives = 103/274 (37%), Gaps = 26/274 (9%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYFDFR 64
L+ G+G + +VL HG+ D +W+R L +RVI +D G S +
Sbjct: 15 LYYEDQGSG-QPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVN----- 68
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLL-ASIRRPDLFTKLILIGA-SPR 122
D + DL +L+TL + VG S+ + + KL + + P
Sbjct: 69 TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPF 128
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPL------AVGADVPAAVREFSRTL 176
+ +D G + D + A + + AW + +G+ + S +
Sbjct: 129 LVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNV 188
Query: 177 FNMRPDISLFVSKTVFDTDLRGILGLVRV---PCVIIQTSKDVSVPV-SVAEYLQRHLGG 232
++ + + D R + VR P +I+ +KD +P+ + A + +
Sbjct: 189 AIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPE 248
Query: 233 RNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
+ +++E H + V ++ L++
Sbjct: 249 ---ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 6e-29
Identities = 47/260 (18%), Positives = 95/260 (36%), Gaps = 16/260 (6%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFRR 65
L+VR G+G ++ HG ++ + ++ ++ L + I D G S P+
Sbjct: 60 LNVREKGSGPL-MLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKPE----TG 114
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF-- 123
Y + Y DD+ ++ TL VGHS+ A + A+ + PDL ++ I +P
Sbjct: 115 YE-ANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIET 173
Query: 124 -LNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
D +++ + +A+EA A+ + + L +
Sbjct: 174 EALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASS 233
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
++ + +DL V P +I++ V + R + ++ +
Sbjct: 234 AAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPD---LPVVVVP 290
Query: 243 --GHLPHLSAPAIVGPVIRR 260
H + +P I I
Sbjct: 291 GADHYVNEVSPEITLKAITN 310
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 1e-28
Identities = 49/267 (18%), Positives = 93/267 (34%), Gaps = 16/267 (5%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYFDFR 64
++ + G+G + ++ +HG+ D W+ + YL +R I FD G S P
Sbjct: 11 IYFKDWGSG-KPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPW----T 65
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLL-ASIRRPDLFTKLILIGAS-PR 122
D + DD+ +++ L + VG S+ + L+L+GA P
Sbjct: 66 GND-YDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPL 124
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAV-REFSRTLFNMRP 181
F DY G + + + + + G + V + +
Sbjct: 125 FGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIAL 184
Query: 182 DISLFVS----KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237
SL + +TD R + + VP ++I D VP + L ++
Sbjct: 185 LASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELK 244
Query: 238 LLKIEGHLPHLSAPAIVGPVIRRALSR 264
+ K H ++ + + L R
Sbjct: 245 VYKDAPHGFAVTHAQQLNEDLLAFLKR 271
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 4e-28
Identities = 48/267 (17%), Positives = 87/267 (32%), Gaps = 20/267 (7%)
Query: 8 LHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYFDF 63
+ + G D ++ HG+ W L + + +RV+ D G S
Sbjct: 12 IFYKDWGPRDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVW---- 67
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL-LASIRRPDLFTKLILIGASPR 122
+ +D Y DD+ ++ LG+ +VGHS + + D K +LI A P
Sbjct: 68 DGHD-MDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPP 126
Query: 123 F-LNDEDYHGGFEEAEIDKVFRAMEANYEAWA--------YGYAPLAVGADVPAAVREFS 173
+ GG ++ D + +N + YGY V A + +
Sbjct: 127 LMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEAS-EGIIGNWW 185
Query: 174 RTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233
R TD L ++ P +++ D VP + L L
Sbjct: 186 RQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPN 245
Query: 234 NTVELLKIEGHLPHLSAPAIVGPVIRR 260
++ K H + ++ +
Sbjct: 246 GALKTYKGYPHGMPTTHADVINADLLA 272
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 5e-28
Identities = 49/265 (18%), Positives = 91/265 (34%), Gaps = 18/265 (6%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYFDFR 64
++ + G+G + +V +HG+ + +W+ + +L +RVI D G S P
Sbjct: 11 IYYKDWGSG-QPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPW----- 64
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL-LASIRRPDLFTKLILIGASPR- 122
+D Y DDL +++ L + G S K LI A P
Sbjct: 65 SGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPL 124
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG------YAPLAVGADVPAAVREFSRTL 176
L E GG D + +A A+ + GA A + ++
Sbjct: 125 MLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQ 184
Query: 177 FNMRPDISLFVS-KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT 235
+ + K +TD L + VP +++ D VP+ + L +T
Sbjct: 185 GMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGST 244
Query: 236 VELLKIEGHLPHLSAPAIVGPVIRR 260
+++ H + + +
Sbjct: 245 LKIYSGAPHGLTDTHKDQLNADLLA 269
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 6e-28
Identities = 50/283 (17%), Positives = 84/283 (29%), Gaps = 31/283 (10%)
Query: 8 LHVRVVGTGDRI-LVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLV-CAGSVNPDYFD 62
+ + L++ HG + + L VI +D V C S +
Sbjct: 44 VTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAP 103
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
+T +VD+ + LG+ R +G S M+G ++R+P L + +
Sbjct: 104 ADFWTP-QLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPAS 162
Query: 123 FLNDEDYHGGF-------EEAEIDKVFR-----------AMEANYEAWAYGYAPL-AVGA 163
+ G A +D+ A Y P A
Sbjct: 163 MRLWSEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFA 222
Query: 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA 223
D A + M V T+ D + L V P ++I D + P
Sbjct: 223 DSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEATPK-TW 281
Query: 224 EYLQRHLGGRNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
+ H+ V H HL P V+ + L +
Sbjct: 282 QPFVDHIPD---VRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQ 321
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 6e-28
Identities = 49/274 (17%), Positives = 98/274 (35%), Gaps = 29/274 (10%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAW---QRILPYL--NHHRVIMFDLVCAG-SVNPDYF 61
+H G GD +VL HG G + W R + L +RVI+ D G S +
Sbjct: 27 IHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNS 86
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
+ D L +++D L + + +G+S+ + +++ P+ KL+L+G
Sbjct: 87 G----SRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGT 142
Query: 122 RFLNDEDYHGGFEEAEIDKVFR-----AMEANYEAWAYGYAPLAVGADVPAAVREFSRTL 176
++ +++++R ++ + + + + L A +
Sbjct: 143 GGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLT-----DALFEARLNNM 197
Query: 177 FNMRPDISLFV----SKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232
+ R + FV + D L ++ +I+ D VP+ L + G
Sbjct: 198 LSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAG 257
Query: 233 RNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
EL GH ++ L+R
Sbjct: 258 ---SELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 4e-27
Identities = 48/266 (18%), Positives = 89/266 (33%), Gaps = 18/266 (6%)
Query: 8 LHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYFDF 63
+ + G D +V HG+ W + + + +RVI D G S P
Sbjct: 11 IFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPS---- 66
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHS-VSAMIGLLASIRRPDLFTKLILIGAS-P 121
+ +D Y D+ + + L + ++GHS + + P K +L+ A P
Sbjct: 67 TGHD-MDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPP 125
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG------YAPLAVGADV-PAAVREFSR 174
+ + G D+ A+ AN + Y GA V + +
Sbjct: 126 VMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWL 185
Query: 175 TLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN 234
+ +TD L + VP ++ + D VP + A L
Sbjct: 186 QGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANA 245
Query: 235 TVELLKIEGHLPHLSAPAIVGPVIRR 260
T++ + H + P ++ P +
Sbjct: 246 TLKSYEGLPHGMLSTHPEVLNPDLLA 271
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 5e-27
Identities = 44/273 (16%), Positives = 82/273 (30%), Gaps = 25/273 (9%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYFDFR 64
+ + G G R +V HG+ + AWQ L + +R I D G S
Sbjct: 11 IFYKDWGQG-RPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVW----D 65
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL-LASIRRPDLFTKLILIGAS-PR 122
Y D + DDL ++L L + V HS+ +L+ A P
Sbjct: 66 GYD-FDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPV 124
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG-----YAPLAVGADVPAAVREFSRTLF 177
+ + G + D + + + ++ G V ++ +
Sbjct: 125 MIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMA 184
Query: 178 NMRPDISLF-VSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV-SVAEYLQRHLGGRNT 235
+ TD L +P +++ D VP+ + + +
Sbjct: 185 MAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPN--- 241
Query: 236 VELLKIE--GHLPHLSA--PAIVGPVIRRALSR 264
EL E H + + L++
Sbjct: 242 AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 7e-27
Identities = 32/258 (12%), Positives = 76/258 (29%), Gaps = 22/258 (8%)
Query: 14 GTGDRILVLAHGFGTDQSA--WQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFRRYTTL 69
G+ V G G +A + I+ L + ++ D +G S + + L
Sbjct: 38 REGNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANV----GL 93
Query: 70 DAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDY 129
+V+ +L I + HS+ L + I + + + +
Sbjct: 94 RDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGF 153
Query: 130 HGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTL------FNMRPDI 183
++ + ++ + Y L+ ++ R N +
Sbjct: 154 SSDLYP-QLALRRQKLKTAADRLNY-LKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSL 211
Query: 184 SLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE- 242
F + + ++P ++ + +EYL +H +L+
Sbjct: 212 PDFKIRLALGEEDFKTGISEKIPSIVF-SESFREKEYLESEYLNKH----TQTKLILCGQ 266
Query: 243 GHLPHLSAPAIVGPVIRR 260
H H S + + +
Sbjct: 267 HHYLHWSETNSILEKVEQ 284
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 2e-26
Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 21/268 (7%)
Query: 8 LHVRVVGTGDR-ILVLAHGFGTDQSA---WQRILPYL-NHHRVIMFDLVCAG-SVNPDYF 61
H V G +VL HG G A W+ I+P L + V+ DL+ G S P+ +
Sbjct: 19 SHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETY 78
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA-- 119
+ + V+ +L +++ G+ + VG+S+ + L + P+ F K+ L+G+
Sbjct: 79 PGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVG 138
Query: 120 ---SPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA-VGADVPAAVREFSRT 175
+ R + + + + + V + A R
Sbjct: 139 APMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRR 198
Query: 176 LF-NMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN 234
+ M + + LG + ++ +D VP+ + YL +HL
Sbjct: 199 IQEVMFESMKAGMES---LVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKH-- 253
Query: 235 TVELLKIE--GHLPHLSAPAIVGPVIRR 260
EL+ ++ GH L +GP++
Sbjct: 254 -AELVVLDRCGHWAQLERWDAMGPMLME 280
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 4e-26
Identities = 36/263 (13%), Positives = 70/263 (26%), Gaps = 14/263 (5%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAG-SVNPDYFDF 63
+ +G+G ++ HG D+ + L ++ I DL G S
Sbjct: 13 ISYFSIGSGT-PIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP--- 68
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123
T+ + + I + +G R GHS + + D + L
Sbjct: 69 --STSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITA 126
Query: 124 LNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDI 183
+ G +++ +E + + + +
Sbjct: 127 -DHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKT 185
Query: 184 SLFVSKTVFDTDLRGILGLV--RVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241
+ + + L + + P I+ D V L H + LL
Sbjct: 186 FIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHN-ENGEIVLLNR 244
Query: 242 EGHLPHLSAPAIVGPVIRRALSR 264
GH + VG L
Sbjct: 245 TGHNLMIDQREAVGFHFDLFLDE 267
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-26
Identities = 45/270 (16%), Positives = 84/270 (31%), Gaps = 23/270 (8%)
Query: 8 LHVRVVGTGDR---ILVLAHGFGTDQSAWQRILPYL-------NHHRVIMFDLVCAGSVN 57
+ V GT + H G + + + L + + D
Sbjct: 23 VTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGA 82
Query: 58 PDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI 117
P + +Y +LD D + IL L + VG A I ++ PD L+LI
Sbjct: 83 PVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLI 142
Query: 118 GASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLF 177
P D+ + + + + L+ +++ R +
Sbjct: 143 NIDPNAKGWMDWAAHKLTGLTSSIPDMILGHL----FSQEELSGNSELIQKYRGIIQHAP 198
Query: 178 NMRPDISLFVSKTVFDTDL---RGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN 234
N+ +I L+ + DL RG ++ P +++ + L
Sbjct: 199 NLE-NIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQA--PHEDAVVECNSKLDPTQ 255
Query: 235 TVELLKIE--GHLPHLSAPAIVGPVIRRAL 262
T LK+ G P L+ P + + L
Sbjct: 256 T-SFLKMADSGGQPQLTQPGKLTEAFKYFL 284
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-25
Identities = 50/274 (18%), Positives = 100/274 (36%), Gaps = 35/274 (12%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSA---WQRILPYL-NHHRVIMFDLVCAG-SVNPDYFD 62
+ VG G ++L HG G SA W+ +P L +RVI D+V G + P+ ++
Sbjct: 17 TNYHDVGEGQ-PVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYN 75
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
+ + D++VD ++ I+D L + + VG++ + + ++R + +++L+GA+
Sbjct: 76 Y----SKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAG- 130
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV----------PAAVREF 172
+ G M + +AY V ++ P F
Sbjct: 131 -TRFDVTEGLNAVWGYTPSIENMRNLLDIFAYD--RSLVTDELARLRYEASIQPGFQESF 187
Query: 173 SRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232
S R + + + +II +D VP+S + L +
Sbjct: 188 SSMFPEPRQRWIDAL------ASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDR 241
Query: 233 RNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
+L GH + ++ +
Sbjct: 242 ---AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 272
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 98.7 bits (246), Expect = 9e-25
Identities = 36/262 (13%), Positives = 73/262 (27%), Gaps = 14/262 (5%)
Query: 9 HVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFRR 65
++ D ++L G+ D ++ ++ L RVI+ + G S +
Sbjct: 18 YIDNQRDTDGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEV----PD 73
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL-LASIRRPDLFTKLILIGASPRFL 124
+ V D L ILD LGV V HS + + L P+ + I++
Sbjct: 74 FG-YQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAP 132
Query: 125 NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDIS 184
+ + ++ ++ W G+ V + + ++ + +
Sbjct: 133 KPDFAKSLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVI 192
Query: 185 LFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE-- 242
P I + + K+
Sbjct: 193 EDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPW---FSYAKLGGP 249
Query: 243 GHLPHLSAPAIVGPVIRRALSR 264
H P + P IR +
Sbjct: 250 THFPAIDVPDRAAVHIREFATA 271
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 2e-24
Identities = 41/260 (15%), Positives = 77/260 (29%), Gaps = 26/260 (10%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAW----QRILPYL-NHHRVIMFDLVCAG-SVNPDYF 61
+H G G+ +++L HG G W + + P++ +RVI+ D S
Sbjct: 25 IHYNEAGNGETVIML-HGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVV-- 81
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
+ ++D L ++R VG+++ L ++ PD KLIL+G
Sbjct: 82 --MDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGG 139
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEA-------NYEAWAYGYAPLAVGADVPAAVREFSR 174
I +F+ L + R
Sbjct: 140 LG---PSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQR 196
Query: 175 TLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN 234
+++ + + D+ LG ++ I D VP+ L ++
Sbjct: 197 QPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDD-- 254
Query: 235 TVELLKIE--GHLPHLSAPA 252
L G
Sbjct: 255 -ARLHVFSKCGAWAQWEHAD 273
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 96.8 bits (241), Expect = 7e-24
Identities = 46/288 (15%), Positives = 73/288 (25%), Gaps = 35/288 (12%)
Query: 8 LHVRVVGTGDRI-LVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDF 63
L G L+L G W VI +D G F
Sbjct: 13 LWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAA 72
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123
Y D + +LD GV+R VG S+ A I + ++ D + L ++
Sbjct: 73 HPYG-FGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLD 131
Query: 124 LNDEDYHGGFEEAEIDKVFRAM---EANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMR 180
++ + E A+V V ++
Sbjct: 132 IDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGV 191
Query: 181 PDISLFVSKTVF----------------------DTDLRGILGLVRVPCVIIQTSKDVSV 218
P ++ L V VP ++IQ D
Sbjct: 192 PFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIA 251
Query: 219 PVSVAEYLQRHLGGRNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
P ++L + L +I GH S + VI
Sbjct: 252 PAPHGKHLAGLIPT---ARLAEIPGMGHALPSSVHGPLAEVILAHTRS 296
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 7e-24
Identities = 46/269 (17%), Positives = 84/269 (31%), Gaps = 25/269 (9%)
Query: 8 LHVRVVGTGDRI-LVLAHGFGTDQSAW---QRILPYL-NHHRVIMFDLVCAG-SVNPDYF 61
LH G G+ +VL HG G ++W R + L H V+ D G S
Sbjct: 26 LHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEH 85
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS- 120
L + D LG+ R VG+++ + ++ P +L+L+G
Sbjct: 86 ----GQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGG 141
Query: 121 -PRFLNDEDYHGGFE---EAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSR-- 174
L D G + + + +EA Y + ++ +
Sbjct: 142 LSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYD--KNLITPELVDQRFALASTP 199
Query: 175 -TLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233
+L R F + + +R P ++I +D P+ A + +
Sbjct: 200 ESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPR- 258
Query: 234 NTVELLKIE--GHLPHLSAPAIVGPVIRR 260
+L GH + +
Sbjct: 259 --AQLHVFGQCGHWVQVEKFDEFNKLTIE 285
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 1e-23
Identities = 38/262 (14%), Positives = 85/262 (32%), Gaps = 19/262 (7%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG--SVNPDYFDFR 64
+ G+G +VL G + ++ + L H VI +D G P Y
Sbjct: 15 IAFERSGSGPP-VVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDSGDTPPY---- 69
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
++ ++DL I+D G G S A + LLA+ + +
Sbjct: 70 ---AVEREIEDLAAIIDAAGG-AAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYAVDD 125
Query: 125 NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE--FSRTLFNMRPD 182
+ ++ + + + + + V D+ A +++ + +
Sbjct: 126 SRPPVPPDYQTRLDALLAEGRRGDAVTY-FMTEGVGVPPDLVAQMQQAPMWPGMEAVAHT 184
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
+ + +T + +P +++ + A+ L + + +E
Sbjct: 185 LPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIPN---ARYVTLE 241
Query: 243 GHLPHLSAPAIVGPVIRRALSR 264
H AP + PV+ +R
Sbjct: 242 N-QTHTVAPDAIAPVLVEFFTR 262
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 94.1 bits (234), Expect = 9e-23
Identities = 50/286 (17%), Positives = 92/286 (32%), Gaps = 35/286 (12%)
Query: 8 LHVRVVGTGD---RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDYF 61
+ V R ++L HG W+R + L +RVI D V S P ++
Sbjct: 34 MAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHY 93
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
+ + + +L+ LGV R + +GHS+ M+ ++ P +L+L+
Sbjct: 94 QY----SFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIG 149
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP 181
L D G + D R ++ + E + + + M
Sbjct: 150 --LEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYR 207
Query: 182 D--------ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233
S +F + L +++P +++ KD + A +
Sbjct: 208 GKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLG 267
Query: 234 NTVELLK-------------IE--GHLPHLSAPAIVGPVIRRALSR 264
N +L K GH P + AP + L
Sbjct: 268 NYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGLQT 313
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 2e-22
Identities = 51/277 (18%), Positives = 97/277 (35%), Gaps = 43/277 (15%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSA---WQRILPYL-NHHRVIMFDLVCAG-SVNPDYFD 62
G G ++L HG G + W+ ++P L H+RVI D++ G + PD
Sbjct: 28 TRYLEAGKGQ-PVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPD--- 83
Query: 63 FRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS- 120
T D + L + + + + + VG+S+ GL S+ +L L+L+G++
Sbjct: 84 --IEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAG 141
Query: 121 -PRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV----------PAAV 169
++++ + + + ++A + + A
Sbjct: 142 LVVEIHEDLRPIINYDFTREGMVHLVKALT------NDGFKIDDAMINSRYTYATDEATR 195
Query: 170 REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRH 229
+ + T+ +R LF + V+VP +++Q D VPV A
Sbjct: 196 KAYVATMQWIREQGGLFYD--------PEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDL 247
Query: 230 LGGRNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
+ I GH + P LS
Sbjct: 248 IDD---SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 281
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 90.0 bits (223), Expect = 2e-21
Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 23/260 (8%)
Query: 20 LVLAHGFGTDQSAWQRILPYLNH--HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL 77
VL HG +W ++ P L H+V DL +G D TL Y L+
Sbjct: 7 FVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASG---TDLRKIEELRTLYDYTLPLM 63
Query: 78 NILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEA 136
++++L + VGHS+ M LA + P + + A F+ D ++ F
Sbjct: 64 ELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAA---FMPDSVHNSSFVLE 120
Query: 137 EIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD------------IS 184
+ ++ A + +P + + + L+ + S
Sbjct: 121 QYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSS 180
Query: 185 LFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGH 244
LF+ V V I ++D +P + ++G +E+ H
Sbjct: 181 LFMEDLSKAKYFTD-ERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGA-DH 238
Query: 245 LPHLSAPAIVGPVIRRALSR 264
+ L P + + +
Sbjct: 239 MAMLCEPQKLCASLLEIAHK 258
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 89.5 bits (222), Expect = 2e-21
Identities = 41/256 (16%), Positives = 75/256 (29%), Gaps = 9/256 (3%)
Query: 8 LHVRVVGTGDR-ILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRR 65
+ G L L G+ D ++ + P L VI D + D DF
Sbjct: 11 MTYSESGDPHAPTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTDSGDF-- 68
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL-LASIRRPDLFTKLILIGASPRFL 124
DLL +D G+ V S + + + K I+I +
Sbjct: 69 --DSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPH 126
Query: 125 NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDIS 184
+ E + ++ ++ WA V + + F ++ R
Sbjct: 127 PGF-WQQLAEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMW-QRACRE 184
Query: 185 LFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGH 244
+ + + + L + L + P + S+ +S + + H
Sbjct: 185 IEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTH 244
Query: 245 LPHLSAPAIVGPVIRR 260
P L P V IR
Sbjct: 245 FPSLENPVAVAQAIRE 260
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 6e-21
Identities = 44/271 (16%), Positives = 82/271 (30%), Gaps = 27/271 (9%)
Query: 8 LHVRVVG--TGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDF 63
LH R ++ G + ++ + L RV+ ++ G S D
Sbjct: 18 LHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAK--DP 75
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123
Y Y+ DL +L G+ R +G S+ ++ +L + P +L P
Sbjct: 76 MTYQ-PMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPE- 133
Query: 124 LNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTL------- 176
++ E + F A + D+ +R R +
Sbjct: 134 VSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGR 193
Query: 177 --FNMRPDISLFVSKTVFDTD----LRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230
F+ I+ V T L P ++++ + A +
Sbjct: 194 IAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMASRP 253
Query: 231 GGRNTVELLKIE--GHLPHLSAPAIVGPVIR 259
G L+ + GH P L P + + R
Sbjct: 254 GVE----LVTLPRIGHAPTLDEPESIAAIGR 280
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 85.0 bits (210), Expect = 8e-20
Identities = 50/257 (19%), Positives = 86/257 (33%), Gaps = 23/257 (8%)
Query: 20 LVLAHGFGTDQSAWQRILPYLNH--HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL 77
VL HG W ++ P L H+V DL AG + T Y + L+
Sbjct: 13 FVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAG---INPRRLDEIHTFRDYSEPLM 69
Query: 78 NILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGA-------SPRFLNDEDY 129
++ ++ + +GHS M LA P+ + + + A S + ++
Sbjct: 70 EVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYN 129
Query: 130 HGGFEEAEIDKVFRAM---EANYEAWAYGYAPLA--VGADVPAAVREFSRTLFNMRPDIS 184
+ +D F E + G +A + + E ++ L RP S
Sbjct: 130 EKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKML--TRP-GS 186
Query: 185 LFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGH 244
LF V I ++D S PV ++ +G E+ + H
Sbjct: 187 LFFQDLAKAKKFST-ERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEA-DH 244
Query: 245 LPHLSAPAIVGPVIRRA 261
+ LS P V +
Sbjct: 245 MGMLSQPREVCKCLLDI 261
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 9e-19
Identities = 40/283 (14%), Positives = 93/283 (32%), Gaps = 34/283 (12%)
Query: 8 LHVRVVGTGDRI--LVLAHGFGTDQSAWQRILPYLN--HHRVIMFDLV-CAGSVNPDYFD 62
++ ++ + L+ HG + L + V+ +D C S + D
Sbjct: 17 IYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRS---EEPD 73
Query: 63 FRRYTTLDAYVDDLLNILDTL-GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
++T D V++ + L G + +G S + L +++ D LI+ G
Sbjct: 74 QSKFTI-DYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLS 132
Query: 122 -RFLNDEDYHGGFEE--AEIDKVFRAMEAN-------YEAWAYGYAPLAVGADVPAAVRE 171
L ++ + +E A+ + ++ Y+ + +
Sbjct: 133 SVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEV 192
Query: 172 FSRTLFNMRPDI--------SLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA 223
+ R ++ ++ T+ D D+ + +++P +I D P +VA
Sbjct: 193 LKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVA 251
Query: 224 EYLQRHLGGRNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
+ + G EL HL ++ + +
Sbjct: 252 RVIHEKIAG---SELHVFRDCSHLTMWEDREGYNKLLSDFILK 291
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 2e-18
Identities = 52/268 (19%), Positives = 88/268 (32%), Gaps = 23/268 (8%)
Query: 8 LHVRVVGTGD--RILVLAHGFGTDQSAWQRILPYLN--HHRVIMFDLV-CAGSVNPDYFD 62
+H G D + HG + ++++LP RV+ DL S P D
Sbjct: 35 MHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPT--D 92
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI----- 117
YT + LL LD L + R V ++GL + RP L +LI++
Sbjct: 93 DAVYT-FGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALA 151
Query: 118 -GASPRFLNDEDYHGGFEEAEIDK---VFRAMEANYEAWAYGY-APLAVGADVPAAVREF 172
G SP + ++D + RA+ +A Y AP A VR F
Sbjct: 152 VGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFK-AGVRRF 210
Query: 173 SRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232
+ + + P + ++D + V L++ + G
Sbjct: 211 PAIVPITPDMEGAEIGRQAMSFWST----QWSGPTFMAVGAQDPVLGPEVMGMLRQAIRG 266
Query: 233 RNTVELLKIEGHLPHLSAPAIVGPVIRR 260
+++ GH I +
Sbjct: 267 CPEPMIVEAGGHFVQEHGEPIARAALAA 294
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 81.2 bits (200), Expect = 2e-18
Identities = 35/258 (13%), Positives = 81/258 (31%), Gaps = 20/258 (7%)
Query: 20 LVLAHGFGTDQSAWQRILPYLNH--HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL 77
VL H W +I+ + H V DL +G + + Y+ L+
Sbjct: 15 FVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASG---INPKQALQIPNFSDYLSPLM 71
Query: 78 NILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGA-------SPRFLNDEDY 129
+ +L N VGH++ + A P+ + + + + +
Sbjct: 72 EFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAG 131
Query: 130 HGGFEEAEIDKVFR-AMEANYEAWAYGYAPLA--VGADVPAAVREFSRTLFNMRPDISLF 186
+ + + G LA V P + L +RP + L+
Sbjct: 132 SAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALATAL--VRP-LYLY 188
Query: 187 VSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLP 246
+++ + + V V I +++ ++ + + E ++ H+
Sbjct: 189 LAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVKE-IEGSDHVT 247
Query: 247 HLSAPAIVGPVIRRALSR 264
+S P + + ++
Sbjct: 248 MMSKPQQLFTTLLSIANK 265
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 79.0 bits (194), Expect = 1e-17
Identities = 34/258 (13%), Positives = 68/258 (26%), Gaps = 29/258 (11%)
Query: 21 VLAHGFGTDQSAWQRILPYLNH--HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78
VL H W ++ P L H+V DL +G D + D Y + LL
Sbjct: 7 VLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASG---VDPRQIEEIGSFDEYSEPLLT 63
Query: 79 ILDTLGVN-RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAE 137
L+ L + VG S + +A+ + + + +
Sbjct: 64 FLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPD------TEHCPSYV 117
Query: 138 IDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFN--------------MRPDI 183
+DK+ + + Y R R
Sbjct: 118 VDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGS 177
Query: 184 SLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG 243
LF + G + + + T +D + + + ++
Sbjct: 178 -LFQNILAKRPFFTKE-GYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYK-VEGGD 234
Query: 244 HLPHLSAPAIVGPVIRRA 261
H L+ + +++
Sbjct: 235 HKLQLTKTKEIAEILQEV 252
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 5e-17
Identities = 53/270 (19%), Positives = 90/270 (33%), Gaps = 31/270 (11%)
Query: 8 LHVRVVGTGDRI----LVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYF 61
L++R ++ +VL HG + L N H +I D+ G S
Sbjct: 3 LNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVM 62
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
++ A DL++ LD L +++ ++GHS+ + + PD KL+ I +P
Sbjct: 63 NY------PAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAP 116
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP 181
DYH + + E++ + A + + V +F +
Sbjct: 117 V-----DYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLN-EEGVIQFLLK--SFVD 168
Query: 182 DISLFVSKTVFDTDLRGILGL-----VRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236
F ++D I+G P + I V + L
Sbjct: 169 GEWRFNVPVLWDQ-YPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQ---A 224
Query: 237 ELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
I GH H P V IRR L+
Sbjct: 225 RAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} Length = 258 | Back alignment and structure |
|---|
Score = 77.0 bits (189), Expect = 7e-17
Identities = 49/254 (19%), Positives = 80/254 (31%), Gaps = 21/254 (8%)
Query: 21 VLAHGFGTDQSAWQRILPYLNH--HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78
VL H W ++ P L HRV +L +G D + T+D Y L+
Sbjct: 8 VLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASG---IDPRPIQAVETVDEYSKPLIE 64
Query: 79 ILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAE 137
L +L N VG S + LA+ P L+ + A H + E
Sbjct: 65 TLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYME 124
Query: 138 IDKVFRAMEANYEAWAYGYAPL----------AVGADVPAAVREFSRTLFNMRPDISLFV 187
+ E + G L + + P E ++ L R S F
Sbjct: 125 MPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNCPIEDYELAKML--HRQ-GSFFT 181
Query: 188 SKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPH 247
G V V + +S+D ++P ++ + E + H+
Sbjct: 182 EDLSKKEKFSE-EGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVSKVYE-IDGGDHMVM 239
Query: 248 LSAPAIVGPVIRRA 261
LS P + +
Sbjct: 240 LSKPQKLFDSLSAI 253
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 2e-16
Identities = 39/273 (14%), Positives = 79/273 (28%), Gaps = 31/273 (11%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAG------SVNPDYF 61
+ G ++ HG G + W ++ L + DL G + +Y
Sbjct: 72 ISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGL-GEPALAVDLP--GHGHSAWREDGNY- 127
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
+ + L +L L VG S+ + + + PDL +L+L+ +P
Sbjct: 128 ------SPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTP 181
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP----AAVREFSRTLF 177
+ + E E + ++ A P ++R
Sbjct: 182 S--ALQRHAELTAEQRGTVALMHGEREFPSFQ--AMLDLTIAAAPHRDVKSLRRGVFHNS 237
Query: 178 NMRPD------ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231
+ + F L + + P +++ V L R
Sbjct: 238 RRLDNGNWVWRYDAIRTFGDFA-GLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRAT 296
Query: 232 GRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264
V +++ GH P + ++R L
Sbjct: 297 HFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 7e-16
Identities = 54/279 (19%), Positives = 93/279 (33%), Gaps = 30/279 (10%)
Query: 8 LHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLV-CAGSVNPDYFDFR 64
+H VG D ++ HG T W+ I+P++ HR I DL+ S PD
Sbjct: 22 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDL---- 77
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI--GASPR 122
Y D +V L ++ LG+ V H + +G + R P+ + +
Sbjct: 78 DYF-FDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFP 136
Query: 123 FLND--EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLF--- 177
++ E F+ V R + + A+ G P V + + R F
Sbjct: 137 TWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKP 196
Query: 178 -------NMRPDISLFV---SKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ 227
++ + + L VP ++ + V +P + A L
Sbjct: 197 VDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLA 256
Query: 228 RHLGGRNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
L + + I H P ++G I R L
Sbjct: 257 ESLPN---CKTVDIGPGLHYLQEDNPDLIGSEIARWLPA 292
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 9e-16
Identities = 44/282 (15%), Positives = 88/282 (31%), Gaps = 45/282 (15%)
Query: 8 LHVRVVGTGDRILVLA-HGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-------SVN 57
+ + G+ + +VL HG AWQ + L +RV+ DL G +
Sbjct: 16 ICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDL--FGHGRSSHLEMV 73
Query: 58 PDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI 117
Y + ++ + ++ L VGHS+ AM+ + RP +LIL+
Sbjct: 74 TSY-------SSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILV 126
Query: 118 ------------GASPRFLNDEDYHGGFEE----AEIDKVFRAMEANY----EAWAYGYA 157
A + DY + ++ + E ++Y A
Sbjct: 127 ELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILA 186
Query: 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVS 217
+ + + I + + +L ++VP ++
Sbjct: 187 QRITQPNQGGVRWSWDAII--RTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKL 244
Query: 218 VPVSVAEYLQRHLGGRNTVELLKIE-GHLPHLSAPAIVGPVI 258
+ + + V + GH H+ A A + +I
Sbjct: 245 NRPEDLQQQKMTMTQAKRVF---LSGGHNLHIDAAAALASLI 283
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 74.8 bits (183), Expect = 1e-15
Identities = 52/292 (17%), Positives = 87/292 (29%), Gaps = 50/292 (17%)
Query: 20 LVLAHGFGTDQSAWQRILPYL---------NHHRVIMFDLVCAG-SVNPDYFDFRRYTTL 69
LV HG G + W+ LP L +V++ D V G S +
Sbjct: 55 LVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNW 114
Query: 70 DAYVDDLLNILDTLGVNRCAY------VGHSVSAMIGLLASIRRPDLFTKLILI------ 117
D+L I + ++ +GHS+ L + +P+LF LILI
Sbjct: 115 IDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVIT 174
Query: 118 ------GASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAY--------GYAPLAVGA 163
G + + K E Y +
Sbjct: 175 RKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQN 234
Query: 164 DVPAAVREFS---------RTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSK 214
+ + S RT ++ +++ F L + VR + I ++
Sbjct: 235 IIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGAR 294
Query: 215 DVSVPVSVAEYLQRHLGGRNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
P +LQ+ L L I HL ++ AP +V I +
Sbjct: 295 SNWCPPQNQLFLQKTLQN---YHLDVIPGGSHLVNVEAPDLVIERINHHIHE 343
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 72.7 bits (178), Expect = 1e-15
Identities = 23/121 (19%), Positives = 34/121 (28%), Gaps = 12/121 (9%)
Query: 8 LHVRVVGTGDRI----LVLAHGFGTDQSAWQR--ILPYL--NHHRVIMFDLVCAG-SVNP 58
L R G ++L HG WQ L L +R + DL G S
Sbjct: 19 LFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEA 78
Query: 59 DYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIG 118
A L ++D L + + S+S M L + +
Sbjct: 79 AA---PAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVA 135
Query: 119 A 119
Sbjct: 136 P 136
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 1e-15
Identities = 39/281 (13%), Positives = 77/281 (27%), Gaps = 39/281 (13%)
Query: 8 LHVRVVGTGD--RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG--SVNPDYF 61
H G D + + HG T +++++P + RVI D G D
Sbjct: 36 AHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEE 95
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
D+ T + + + LL +++ L + V +GL + P F +LI
Sbjct: 96 DY----TFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLI------ 145
Query: 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY---APLAVGADVPAAVREFS----- 173
+N + + AW Y + L + + +
Sbjct: 146 -IMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEAS 204
Query: 174 -----------RTLFNMRPDISLFVSKTVFDTDLRGI---LGLVRVPCVIIQTSKDVSVP 219
+ P + + D I + KD +
Sbjct: 205 AYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG 264
Query: 220 VSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRR 260
V ++ + G + GH + ++
Sbjct: 265 PDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKH 305
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 4e-15
Identities = 44/278 (15%), Positives = 81/278 (29%), Gaps = 27/278 (9%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLV-CAGSVNPDYFDFRR 65
+ GTGD ++ HG T W+ I+P+ R+I DL+ S D R
Sbjct: 21 MAYIDEGTGD-PILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPER 79
Query: 66 YTTLDAYVDDLLNILDTLGV-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
Y + D L + + L + +R V H + +G + R + + + A +
Sbjct: 80 YA-YAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPI 138
Query: 125 NDEDYHGGFEE---AEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAV------------ 169
D+ + A + + + P + + A
Sbjct: 139 EWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAG 198
Query: 170 --REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ 227
R + + P D G L +P + I +
Sbjct: 199 EARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGA-LTTGRMRDFC 257
Query: 228 RHLGGRNTVELLKIE-GHLPHLSAPAIVGPVIRRALSR 264
R + + H +P +G I + R
Sbjct: 258 RTWPN---QTEITVAGAHFIQEDSPDEIGAAIAAFVRR 292
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-14
Identities = 41/276 (14%), Positives = 82/276 (29%), Gaps = 32/276 (11%)
Query: 4 LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAG-SVNPDY 60
L LH ++VL HG + WQ +L +L + DL G +
Sbjct: 3 LSNQLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHC 62
Query: 61 FDFRRYTTLDAYVDDLLNILDTLGVNR--CAYVGHS----VSAMIGLLASIRRPDLFTKL 114
+F V+ + + + VG+S + M GL
Sbjct: 63 DNF------AEAVEMIEQTVQAHVTSEVPVILVGYSLGGRL-IMHGLAQGAFSRLNLRGA 115
Query: 115 ILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSR 174
I+ G L + + + + R + E + AV + + R+
Sbjct: 116 IIEGGHFG-LQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLI 174
Query: 175 T--LFNMRPDI--SLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230
N+ + L + L L +++P + +D + L
Sbjct: 175 AQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF---------QQL 225
Query: 231 GGRNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
+ + ++ GH H P +++ +
Sbjct: 226 AESSGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHS 261
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 3e-14
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFRR 65
+H G G L+L HG+ W +++ L H+ VI+ DL G S PD D +
Sbjct: 21 IHYVREGAGP-TLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSK 79
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119
Y+ D DD +LD LG+ + VGH +A++ + D K +
Sbjct: 80 YSL-DKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDP 132
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 3e-14
Identities = 38/283 (13%), Positives = 81/283 (28%), Gaps = 37/283 (13%)
Query: 8 LHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLV-CAGSVNPDYFDFR 64
++ ++ HG T W+ ++P++ R I+ DL+ S +
Sbjct: 33 INYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSY- 91
Query: 65 RYTTLDAYVDDLLNILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123
L + L + L + + +VGH A + + D ++ + +
Sbjct: 92 ---RLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDV 148
Query: 124 LNDED------------YHGGFEEAEIDKVFRAMEANY---------EAWAYGYAPLAVG 162
+ D E+ ++ F E +A P
Sbjct: 149 IESWDEWPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEK 208
Query: 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV 222
+V + R + ++ V +P + I D +
Sbjct: 209 GEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLR--ASDDLPKLFI--ESDPGFFSNA 264
Query: 223 AEYLQRHLGGRNTVELLKIE-GHLPHLSAPAIVGPVIRRALSR 264
+ E +K++ H AP +G I+ + R
Sbjct: 265 IVEGAKKF---PNTEFVKVKGLHFLQEDAPDEMGKYIKSFVER 304
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 5e-14
Identities = 51/284 (17%), Positives = 88/284 (30%), Gaps = 36/284 (12%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLV-CAGSVNPDYFDFR 64
+ G+G ++ HG T W+ I+PY+ +R + DL+ S PD
Sbjct: 21 IAYVDEGSGQ-PVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDI---- 75
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA----- 119
Y L +V + +D LG++ V H ++IG+ + PD + + A
Sbjct: 76 EYR-LQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPA 134
Query: 120 ---SPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP-LAVGADVPAAVREFSRT 175
F + V M + + P + V + A R
Sbjct: 135 LPMPSYEAMGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRA 194
Query: 176 LFNMR-------------PDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV 222
F R P L +P ++ P V
Sbjct: 195 PFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPV 254
Query: 223 AEYLQRHLGGRNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
+YL ++ +E+ + H P ++G I L R
Sbjct: 255 VDYLSENVPN---LEVRFVGAGTHFLQEDHPHLIGQGIADWLRR 295
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 5e-14
Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 8 LHVRVVGTGD--RILVLAHGFGTDQSAW--QRILPYL--NHHRVIMFDLVCAG-SVNPDY 60
+ R + T R + L HG+ W + + V D G S + +
Sbjct: 16 VFQRKMVTDSNRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEK 75
Query: 61 FDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120
+ R L + + + L GV R +G S+ + ++ +++ PD+ +I + +
Sbjct: 76 YGIDRGD-LKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPA 134
Query: 121 PRFLNDEDYH 130
D
Sbjct: 135 WVESLKGDMK 144
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 5e-14
Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 10/167 (5%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLV-CAGSVNPDYFDFRR 65
+ G GD +V HG T W+ I+P+L R++ DL+ S R
Sbjct: 20 MAYIDEGKGD-AIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDR 78
Query: 66 YTTLDAYVDDLLNILDTLGV-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
Y+ D L + D L + + V H + +G + + D + + A +
Sbjct: 79 YS-YGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPM 137
Query: 125 NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171
D+ + VF+ + + V +P A+
Sbjct: 138 TWADWP-----PAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILR 179
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 8e-14
Identities = 45/281 (16%), Positives = 86/281 (30%), Gaps = 34/281 (12%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAG-SVNPDYFDF 63
V G+ +L+L HG G +W + R++ DL G + + D
Sbjct: 29 FRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDL 88
Query: 64 RRYTTLDAYVDDLLNILDTLGVN---RCAYVGHSVSAMIGL-LASIRRPDLFTKLILIGA 119
+ + D+ N+++ + + +GHS+ I + AS L +I
Sbjct: 89 ----SAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDV 144
Query: 120 SPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA---YGYAPLAVGADVPAAVREFSRTL 176
D K F+++E E + + V++
Sbjct: 145 VEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGIT 204
Query: 177 FNMRPD--------ISLFVSKTVFDTDLRGI---LGLVRVPCVIIQTSKDVSVPVSVAEY 225
I L ++ +D RG+ +P +++ D
Sbjct: 205 SPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQ 264
Query: 226 LQRHLGGRNTVELLKIE--GHLPHLSAPAIVGPVIRRALSR 264
+Q ++ + GH H AP V + L R
Sbjct: 265 MQGK------FQMQVLPQCGHAVHEDAPDKVAEAVATFLIR 299
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 9e-14
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFRR 65
+ RV G G L+L HGF W R+ P L +VI+ DL G S P+ +
Sbjct: 25 IFARVGGDGP-PLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHT 83
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
T A L+ ++ LG A GH+ A + ++ P +KL ++ P
Sbjct: 84 PYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILP 139
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-13
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFRR 65
++ V G+G L+L HGF + W R+ P L N + V+ DL G S P
Sbjct: 17 INCVVGGSGP-ALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHA 75
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
+ A D ++ TLG R VGH+ G ++ PD L ++ P
Sbjct: 76 NYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIP 131
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 2e-13
Identities = 38/241 (15%), Positives = 74/241 (30%), Gaps = 39/241 (16%)
Query: 16 GDRILVLAHGFGTDQSAWQRILPYLNHH--RVIMFDLVCAGSVNPDYFDFRRYTTLDAYV 73
D +VL H + + + L V + G+V P D D +
Sbjct: 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEP--LDILTKGNPDIWW 78
Query: 74 DDLLNILDTL--GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG 131
+ + + + G S+ + + A P + + SP
Sbjct: 79 AESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFS--SPILPGKHHLVP 136
Query: 132 GFEE--AEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSK 189
GF + ++++ + + + AY LA A+ +F+
Sbjct: 137 GFLKYAEYMNRLAGKSDESTQILAYLPGQLA-------AIDQFAT--------------- 174
Query: 190 TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE--GHLPH 247
+ L LV+ P I Q +D V +A L+ L V+ + H+
Sbjct: 175 -----TVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVIT 229
Query: 248 L 248
+
Sbjct: 230 V 230
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 3e-13
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDFRR 65
+++ G G L+L HG+ W +I P L N+ V+ DL G S P
Sbjct: 17 INLVKAGHGA-PLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHI 75
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
+ D + ++ LG + VGH A + ++ P KL L+ +P
Sbjct: 76 NYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAP 131
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 4e-13
Identities = 36/178 (20%), Positives = 53/178 (29%), Gaps = 12/178 (6%)
Query: 8 LHVRVVGTGDR-ILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLV-CAGSVNPDYFDFR 64
+ R G D +++ HG T W+ ILP + I DL+ S PD
Sbjct: 19 MAYRETGAQDAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDI---- 74
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
Y +V L ++ GV V + + RRPD L +
Sbjct: 75 AYR-FFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRP-- 131
Query: 125 NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
F E+ + EA + P A + A R L
Sbjct: 132 --MPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVR 187
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 8e-13
Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 45/250 (18%)
Query: 2 GDLLEALHVRVVGTGDRILVLAHGFGT--DQSAWQRILPYL--NHHRVIMFDLVCAGSVN 57
G L G + ++ HGF + S + I L + + FD G +
Sbjct: 31 GLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD 90
Query: 58 PDYFDFRRYTTLDAYVDDLLNILDTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTK 113
+ + T+ ++D IL+ + V VGH+ ++ + + PDL K
Sbjct: 91 GKFEN----MTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKK 146
Query: 114 LILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFS 173
++L+ + G E V ++ + L +G +
Sbjct: 147 VVLLAPAA------TLKGDALEGNTQGVTY--NPDHIPDRLPFKDLTLG-------GFYL 191
Query: 174 RTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233
R + + + P +I + D V + ++ +
Sbjct: 192 RIAQQL---------------PIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQN- 235
Query: 234 NTVELLKIEG 243
L IEG
Sbjct: 236 --STLHLIEG 243
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 2e-12
Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 28/237 (11%)
Query: 16 GDRILVLAHGFGTDQSAWQRILPYLNHH--RVIMFDLVCAGSVNPDYFDFRRYTTLDAYV 73
G+R ++L HGF + + + + +L G + V
Sbjct: 15 GERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQD-V 73
Query: 74 DDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGF 133
+ L G + A G S+ + L P ++ + A ++E + G
Sbjct: 74 MNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGV 131
Query: 134 EEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP-AAVREFSRTLFNMRPDISLFVSKTVF 192
++ + ++ + P ++ + ++R
Sbjct: 132 ----LEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDH---------- 177
Query: 193 DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN-TVELLKIEGHLPHL 248
L L+ P ++Q D + A + + ++ + GH+ L
Sbjct: 178 -------LDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITL 227
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-11
Identities = 34/231 (14%), Positives = 71/231 (30%), Gaps = 44/231 (19%)
Query: 21 VLAHGFG--TDQSAWQRILPYLNHH--RVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDL 76
++ HGF +++ + LN + D+ G + + D TL ++ ++
Sbjct: 31 IIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFED----HTLFKWLTNI 86
Query: 77 LNILDTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG 132
L ++D V GHS + +LA+ D+ LI + + + G
Sbjct: 87 LAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMI-PEIARTGE 145
Query: 133 FEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVF 192
+ D N + + + R +R
Sbjct: 146 LLGLKFD------PENIPDELDAWDGRKLK-------GNYVRVAQTIRV----------- 181
Query: 193 DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG 243
+ P +I+ +D +VP + + +L+ I G
Sbjct: 182 ---EDFVDKY-TKPVLIVHGDQDEAVPYEASVAFSKQYKN---CKLVTIPG 225
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-11
Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 13/117 (11%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQS--AWQRILPYL-NHHRVIMFDLVCAG-SVNPDYFDF 63
LH G G +++L HGFG Q+ W +++P L VI DL G S P
Sbjct: 22 LHYVKGGQGP-LVMLVHGFG--QTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPK---- 74
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAY-VGHSVSAMIGLLASIRRPDLFTKLILIGA 119
Y+ + L + +R V H + ++ +L+ + A
Sbjct: 75 TGYSG-EQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEA 130
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 3e-11
Identities = 46/291 (15%), Positives = 106/291 (36%), Gaps = 52/291 (17%)
Query: 9 HVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLV-CAGSVNPDYFDFRR 65
H +G+G + L HGF +W+ +P L +RV+ D+ S P +
Sbjct: 251 HFVELGSGP-AVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPP--EIEE 307
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA--SPRF 123
Y ++ +++ LD LG+++ ++GH M+ ++ P+ + + P
Sbjct: 308 YC-MEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPAN 366
Query: 124 LNDE-----------DYHGGFE-----EAEIDK-VFRAMEANYEAWAYGYAPLAVGADVP 166
N DY F+ EAE+++ + R ++ + A + +
Sbjct: 367 PNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAG 426
Query: 167 AA----------------------VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGL-V 203
V++F ++ R ++ + + LG +
Sbjct: 427 GLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS--GFRGPLNWYRNMERNWKWACKSLGRKI 484
Query: 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIV 254
+P +++ KD + ++++++ + ++ GH + P V
Sbjct: 485 LIPALMVTAEKDFVLVPQMSQHMEDWIPHL-KRGHIEDCGHWTQMDKPTEV 534
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 58.9 bits (142), Expect = 3e-10
Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 16/181 (8%)
Query: 8 LHVRVVGTGDR---ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLV-CAGSVNPDYF 61
+H D+ ++VL HGF +W+ +P L +RV+ D S
Sbjct: 15 IHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYR-- 72
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA-- 119
+ Y + V D++ +LD+ G + VGH A + + PD ++ I
Sbjct: 73 VQKAYR-IKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131
Query: 120 ---SPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTL 176
L + ++ Y Y + ++ +R + L
Sbjct: 132 AGRGVIGLPGSPFGERRPSDYHLELAGPGRVWY--QDYFAVQDGIITEIEEDLRGWLLGL 189
Query: 177 F 177
Sbjct: 190 T 190
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 7e-10
Identities = 53/316 (16%), Positives = 99/316 (31%), Gaps = 70/316 (22%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHH--RVIMFDLV-CAGSVNPDYFDFR 64
+H+ +G G ++ HGF +W+ + YL R + DL + D
Sbjct: 23 MHLAELGEG-PTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPS 81
Query: 65 RYTTLDAYVDDLLNILDTLGVN--RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA--S 120
+++ + V D++ +L+ + N + V H A+I + RPD L+ + S
Sbjct: 82 KFS-ILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFS 140
Query: 121 PRFLND-----------EDYH------GGFEEAEIDK-VFRAMEANYEAWAYGYAP---- 158
R ED++ G EAE +++ +
Sbjct: 141 KRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPK 200
Query: 159 ---LAVGADVPAA-------------VREFSRTLF--------NMRPDISLFVSKTVFDT 194
L D P A +F +T F + + ++
Sbjct: 201 GKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPIN---------WEL 251
Query: 195 DLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE------GHLPHL 248
V+VP I D+ + A+ + G + V LL+ H
Sbjct: 252 TAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQ 311
Query: 249 SAPAIVGPVIRRALSR 264
P + I + +
Sbjct: 312 ERPHEISKHIYDFIQK 327
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 3e-08
Identities = 31/231 (13%), Positives = 64/231 (27%), Gaps = 35/231 (15%)
Query: 19 ILVLAHGFGTDQSAWQRILPYLNHH--RVIMFDLVC-AGSVNPDYFDFRRYTTLDAYVDD 75
+++A GF + + YL+ + V +D + G + +F T+ +
Sbjct: 37 TILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEF----TMTTGKNS 92
Query: 76 LLNILDTL---GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG 132
L + L G + S+SA + F LI A +
Sbjct: 93 LCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSF----LITAVGVVNLRDTLEKA 148
Query: 133 FEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVF 192
+ + + + + L V TL + ++
Sbjct: 149 LGFDYLSLPIDELPNDLDFEGH---KLGSEVFVRDCFEHHWDTLDSTLDKVA-------- 197
Query: 193 DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG 243
VP + + D V + H+ + +L + G
Sbjct: 198 ---------NTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGH-CKLYSLLG 238
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 9e-08
Identities = 37/241 (15%), Positives = 71/241 (29%), Gaps = 37/241 (15%)
Query: 16 GDRILVLAHGFGTDQSAWQRILPYLNHH--RVIMFDLVCAGSVNPDYFDFRRYTTLDAYV 73
G ++L HGF + + + V + L G+ D TT +V
Sbjct: 39 GPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYED----MERTTFHDWV 94
Query: 74 DDLLNILDTL--GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA---SPRFLNDED 128
+ L G S+ + L + PD+ ++ I A P
Sbjct: 95 ASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDI-CGIVPINAAVDIPAIAAGMT 153
Query: 129 YHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVS 188
G + + AY P A ++ + +R + +
Sbjct: 154 GGGELPRYLDSIGSDLKNPDVKELAYEKTPTA-------SLLQLARLMAQTKAK------ 200
Query: 189 KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN-TVELLKIEGHLPH 247
L + P +I + +D VP A+ + + + + L+ H+
Sbjct: 201 -----------LDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVAT 249
Query: 248 L 248
L
Sbjct: 250 L 250
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 1e-07
Identities = 32/270 (11%), Positives = 79/270 (29%), Gaps = 38/270 (14%)
Query: 2 GDLLEALHVRVVGTGDR-ILVLAHGFGTDQSA-WQRILPYLNHHR--VIMFDLVCAGSVN 57
+ A +++++ G + Q+ W+ +L H ++ D+ G +
Sbjct: 177 KGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSS 236
Query: 58 PDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI 117
A +++L + + + +R +G + S + +++
Sbjct: 237 KYPLTEDYSRLHQAVLNELFS-IPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVIL 295
Query: 118 GASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLF 177
GA H F + + M + A G + D+ + + + +
Sbjct: 296 GAP--------IHDIFASPQKLQQMPKMYLDVLASRLGKSV----VDIYSLSGQMAA--W 341
Query: 178 NMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237
+++ L K +VP + + D P S + + +
Sbjct: 342 SLKVQGFLSSRK-------------TKVPILAMSLEGDPVSPYSDNQMVAFFSTY---GK 385
Query: 238 LLKIEGHLPHLSAPAIVGPV---IRRALSR 264
KI + + L R
Sbjct: 386 AKKISSKTITQGYEQSLDLAIKWLEDELLR 415
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Length = 313 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 6e-07
Identities = 55/292 (18%), Positives = 89/292 (30%), Gaps = 48/292 (16%)
Query: 8 LHVRVVGTGDRILVLAH----GFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDF 63
L+ G V+ G G + + P +R+++FD GS
Sbjct: 24 LYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDP--AKYRIVLFDQ--RGSGRSTPHAD 79
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLIL------- 116
T V D+ + LGV+R G S + + L + P T+L+L
Sbjct: 80 LVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLR 139
Query: 117 --------------------------IGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYE 150
I R +H + A +A +
Sbjct: 140 RFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKA-WS 198
Query: 151 AWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVF---DTDLRGILGLVRVPC 207
W + L V D + L R + FV+ F D LR + +P
Sbjct: 199 VWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPG 258
Query: 208 VIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIR 259
VI+ DV P+ A L + +++ GH P V ++R
Sbjct: 259 VIVHGRYDVVCPLQSAWDLHKAWPK-AQLQISPASGHSA--FEPENVDALVR 307
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 48.5 bits (115), Expect = 7e-07
Identities = 40/201 (19%), Positives = 63/201 (31%), Gaps = 20/201 (9%)
Query: 20 LVLAHGF-GTDQSA-----WQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDA 71
++L HG GTD+ A W I L V + +L S + R L A
Sbjct: 11 IILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPN---GRGEQLLA 67
Query: 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG 131
YV +L G + VGHS + + PDL + IG R D+
Sbjct: 68 YVKT---VLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGSEFADFVQ 124
Query: 132 GFEEAEIDKVFRAMEANYEA--WAYGYAPLAVGADVPAAVREFSR---TLFNMR-PDISL 185
G + + + A + + D AA++ + +N P L
Sbjct: 125 GVLAYDPTGLSSTVIAAFVNVFGILTSSSNNTNQDALAALKTLTTAQAATYNQNYPSAGL 184
Query: 186 FVSKTVFDTDLRGILGLVRVP 206
+ +G
Sbjct: 185 GAPGSCQTGAPTETVGGNTHL 205
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 3e-06
Identities = 48/294 (16%), Positives = 89/294 (30%), Gaps = 53/294 (18%)
Query: 8 LHVRVVGTGDRILVLA-H---GFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDF 63
++ + G + + H G G Q P ++V++FD G
Sbjct: 27 IYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDP--ERYKVLLFDQ--RGCGRSRPHAS 82
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLIL------- 116
T V D+ + + GV + G S + + L + P+ ++++L
Sbjct: 83 LDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLR 142
Query: 117 --------------------------IGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYE 150
+ R Y A+ A + +
Sbjct: 143 KQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKL-WS 201
Query: 151 AWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTD---LRGILGLVRVPC 207
W L + A+ E L R + F ++D LR + + +P
Sbjct: 202 VWEGETVTLLPSRE-SASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPA 260
Query: 208 VIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE--GHLPHLSAPAIVGPVIR 259
VI+ D++ V A L + EL +E GH P I+ ++
Sbjct: 261 VIVHGRYDMACQVQNAWDLAKAWPE---AELHIVEGAGHSY--DEPGILHQLMI 309
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 6e-06
Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 14/95 (14%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAG-SVNPDYFDFRRY 66
L VG G +L++A S W LP + + DL G + P
Sbjct: 14 LVFDRVGKGPPVLLVAEEA----SRWPEALP--EGYAFYLLDLPGYGRTEGPRM------ 61
Query: 67 TTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL 101
+ + + + + + +G
Sbjct: 62 -APEELAHFVAGFAVMMNLGAPWVLLRGLGLALGP 95
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 3e-05
Identities = 37/232 (15%), Positives = 58/232 (25%), Gaps = 55/232 (23%)
Query: 20 LVLAHGFGTDQSAWQRILPYLNHH--RVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL 77
++ HG+G Q + FDL Y R+ T +DD+
Sbjct: 31 VLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHE----GYASMRQSVTRAQNLDDIK 86
Query: 78 NILDTLG------VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG 131
D L + A VG S + L + RP + L SP D +
Sbjct: 87 AAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERPVEW----LALRSPALYKDAHWDQ 142
Query: 132 GFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTV 191
D A L AA ++
Sbjct: 143 PKVSLNADPDLMDYRRRALAPG-DNLAL-------AACAQY------------------- 175
Query: 192 FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG 243
+ ++++ DV VP V ++ I G
Sbjct: 176 ------------KGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAG 215
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 4e-05
Identities = 33/265 (12%), Positives = 65/265 (24%), Gaps = 29/265 (10%)
Query: 5 LEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHHR---VIMFDLVCAGSVNPDYF 61
L + L++ G T + +L Y V+M DL G
Sbjct: 147 LPGYAIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGL 206
Query: 62 DFRRYTTLDAYVDDLLNILDTLGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119
F + ILD + A G S A + I
Sbjct: 207 HFEVD-----ARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDKR-IKAWIASTP 260
Query: 120 SPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNM 179
E+ ++ + + V + A ++ +
Sbjct: 261 IYDVA------------EVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQF 308
Query: 180 RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT-VEL 238
+ V + + VP + + + + S + ++ L + R V L
Sbjct: 309 GQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTL 368
Query: 239 L---KIEGHLPHLS--APAIVGPVI 258
G H ++ +
Sbjct: 369 RKFSSESGADAHCQVNNFRLMHYQV 393
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 7e-05
Identities = 38/257 (14%), Positives = 64/257 (24%), Gaps = 31/257 (12%)
Query: 2 GDLLEALHVRVVGTGDRILVLAHGFGTD--QSAWQRILPYL--NHHRVIMFDLVCAGSVN 57
+ AL + G+ +D + + I FD G+
Sbjct: 22 ARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASG 81
Query: 58 PDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI 117
+ D + ++++ L +LD + VG S+ I L +
Sbjct: 82 GAFRDGT----ISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQV 137
Query: 118 GASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLF 177
D+ E E GY
Sbjct: 138 SGMVLIAPAPDFTSDLIEP-----LLGDRERAELAENGYFEEVSE-------------YS 179
Query: 178 NMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237
+ + + + + P I+Q D VP A L HL + V
Sbjct: 180 PEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPADD-VV 238
Query: 238 LLKIEG--HLPHLSAPA 252
L + H LS P
Sbjct: 239 LTLVRDGDHR--LSRPQ 253
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 1e-04
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 15/108 (13%)
Query: 20 LVLAHGFGTDQSAWQRILPYLNHH-----RVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD 74
+V+ HG G + I YL ++ D N + L +V
Sbjct: 6 VVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGP-----VLSRFVQ 60
Query: 75 DLLNILDTLGVNRCAYVGHSVSAMIG--LLASIRRPDLFTKLILIGAS 120
+LD G + V HS+ + ++ + ++ +G +
Sbjct: 61 K---VLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGA 105
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 1e-04
Identities = 34/260 (13%), Positives = 68/260 (26%), Gaps = 42/260 (16%)
Query: 2 GDLLEALHVRVVGTGDR-ILVLAHGFGTDQSAWQRILPYLNH--HRVIMFDLVCAGSVNP 58
G + G G +++ G + + ++ + FD G +
Sbjct: 136 GIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFE 195
Query: 59 DYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIG 118
Y + V DLL L+ + + +G S+ L ++ P I G
Sbjct: 196 YKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPR-LAACISWG 254
Query: 119 ASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFN 178
D E+W Y D R
Sbjct: 255 GFSDL---------------DYWDLETPLTKESWKY-----VSKVDTLEEARLHVHAAL- 293
Query: 179 MRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238
+ R +L + P I+ D VP+S + + + + +
Sbjct: 294 ----------------ETRDVLSQIACPTYILHGVHD-EVPLSFVDTVLELVPAEHLNLV 336
Query: 239 LKIEGHLPHLSAPAIVGPVI 258
++ +G + +
Sbjct: 337 VEKDGDHCCHNLGIRPRLEM 356
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 39.2 bits (90), Expect = 3e-04
Identities = 9/33 (27%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 134 EEAEIDKVFRAMEANYEAWAYGYAP-LAVGADV 165
E+ + K ++A+ + +A AP LA+ A +
Sbjct: 18 EKQALKK----LQASLKLYADDSAPALAIKATM 46
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 4e-04
Identities = 24/170 (14%), Positives = 45/170 (26%), Gaps = 60/170 (35%)
Query: 3 DLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHH-------------RVIMFD 49
+ ALH +V + Q ++ HH R++ D
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD 499
Query: 50 L--------------VCAGSVNPDYFDFRRY--------TTLDAYVDDLLNILDTLGVNR 87
+GS+ + Y + V+ +L+ L + N
Sbjct: 500 FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEEN- 558
Query: 88 CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAE 137
I +T L+ I + +++ FEEA
Sbjct: 559 ----------------LICSK--YTDLLRIA----LMAEDEAI--FEEAH 584
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 5e-04
Identities = 36/301 (11%), Positives = 76/301 (25%), Gaps = 107/301 (35%)
Query: 47 MFDLVCA-----------GSVNPDYFDF-------------RRYTTLDAYVDDLLN---I 79
+F + + + +Y F D L N +
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINY-KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 80 LDTLGVNRCAYVGHSVSAMIGLLASIRR-PDL-------FTKLILIGASPRFLNDEDYHG 131
V+R + L +R ++ K +
Sbjct: 126 FAKYNVSR----LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV---CLSYKVQC 178
Query: 132 GFEEAEIDKVF---------------------RAMEANYEAWAYGYAPLAVGADVPAAVR 170
+ K+F ++ N+ + + + + + +++
Sbjct: 179 KMD----FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH---SIQ 231
Query: 171 EFSRTLFNMRP-DISLFV-----SKTVFDT-DLRGILGLVRVPCVIIQTSKDVSVPVSVA 223
R L +P + L V + ++ +L C I+ T++ V ++
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS---------CKILLTTRFKQVTDFLS 282
Query: 224 EYLQRH---------LGGRNTVELL-KIEGH----LPH---LSAP---AIVGPVIRRALS 263
H L LL K LP + P +I+ IR L+
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342
Query: 264 R 264
Sbjct: 343 T 343
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 264 | |||
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 100.0 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 100.0 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 100.0 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 100.0 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 100.0 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 100.0 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 100.0 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 100.0 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 100.0 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 100.0 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 100.0 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 100.0 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 100.0 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 100.0 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 100.0 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 100.0 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 100.0 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 100.0 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 100.0 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 100.0 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 100.0 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.97 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.97 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.97 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.97 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.97 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.97 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.97 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.97 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.97 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.97 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.97 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.97 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.97 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.97 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.97 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.97 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.97 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.97 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.96 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.96 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.96 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.96 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.96 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.96 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.96 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.96 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.96 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.96 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.96 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.96 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.96 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.96 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.96 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.95 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.95 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.95 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.95 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.95 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.95 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.95 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.95 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.95 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.94 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.94 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.94 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.94 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.94 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.94 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.93 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.93 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.93 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.93 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.93 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.93 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.93 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.93 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.93 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.93 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.92 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.92 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.92 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.92 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.92 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.92 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.92 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.92 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.92 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.91 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.91 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.91 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.91 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.9 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.9 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.9 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.9 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.9 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.9 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.9 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.89 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.89 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.89 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.89 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.89 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.89 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.88 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.88 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.88 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.87 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.87 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.87 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.87 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.87 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.87 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.86 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.86 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.86 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.86 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.86 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.85 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.85 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.85 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.84 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.83 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.83 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.82 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.81 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.81 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.81 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.81 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.79 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.79 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.79 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.79 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.79 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.77 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.77 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.75 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.74 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.74 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.74 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.74 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.74 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.74 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.73 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.73 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.68 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.66 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.65 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.62 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.62 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.58 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.52 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.41 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.26 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 99.13 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.12 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 99.11 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.1 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.08 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.07 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.06 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.96 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.96 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.91 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.81 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.68 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.68 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.64 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.6 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.59 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.58 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.53 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.52 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.38 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.33 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 98.21 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.19 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.16 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.13 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.13 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.09 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.92 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.89 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.77 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.76 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 97.63 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 97.59 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.4 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.31 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 97.28 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 97.2 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 97.2 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 97.15 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 97.13 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 97.11 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 97.09 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 97.08 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 96.96 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.87 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.87 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 96.03 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 94.96 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 93.24 | |
| 3pa8_A | 254 | Toxin B; CLAN CD cysteine protease, protease, toxi | 91.96 | |
| 4amm_A | 401 | DYNE8; transferase; 1.40A {Micromonospora chersina | 91.01 | |
| 3ho6_A | 267 | Toxin A; inositol phosphate, enterotoxin; HET: IHP | 89.35 | |
| 3im8_A | 307 | Malonyl acyl carrier protein transacylase; fatty a | 84.42 | |
| 2qc3_A | 303 | MCT, malonyl COA-acyl carrier protein transacylase | 84.37 | |
| 3ptw_A | 336 | Malonyl COA-acyl carrier protein transacylase; str | 83.63 | |
| 2qub_A | 615 | Extracellular lipase; beta roll, alpha/beta hydrol | 83.5 | |
| 2cuy_A | 305 | Malonyl COA-[acyl carrier protein] transacylase; t | 83.17 | |
| 3k89_A | 314 | Malonyl COA-ACP transacylase; bacterial blight, XO | 83.01 | |
| 2h1y_A | 321 | Malonyl coenzyme A-acyl carrier protein transacyl; | 82.17 | |
| 1mla_A | 309 | Malonyl-coenzyme A acyl carrier protein transacyla | 82.16 | |
| 3g87_A | 394 | Malonyl COA-acyl carrier protein transacylase; ssg | 80.82 |
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=273.39 Aligned_cols=258 Identities=38% Similarity=0.710 Sum_probs=189.0
Q ss_pred ceeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 5 LEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 5 ~~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+..++|...|+++|+|||+||++++...|..+++.| ++|+|+++|+||||.|+....+...+.+++++++|+.++++.+
T Consensus 8 ~~~~~~~~~G~g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l 87 (271)
T 1wom_A 8 LSRNHVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEAL 87 (271)
T ss_dssp HHHTTCEEEECCSSEEEEECCTTCCGGGGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHT
T ss_pred hhhceeEeecCCCCcEEEEcCCCCchhhHHHHHHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHc
Confidence 456778888988789999999999999999999999 8999999999999999764323334445999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC-CCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE-DYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
+.++++|+||||||.+|+.+|.++|++|+++|++++.+...... .+...+.......+...+......+...+.+....
T Consensus 88 ~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (271)
T 1wom_A 88 DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLN 167 (271)
T ss_dssp TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999865432211 12222233223222222222222222211111111
Q ss_pred C-CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecC
Q 024681 163 A-DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241 (264)
Q Consensus 163 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (264)
. ..+...+.+...+....+.............+....+.++++|+++|+|++|.++|.+..+.+.+.+++ ++++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~ 246 (271)
T 1wom_A 168 QPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPY-SSLKQMEA 246 (271)
T ss_dssp CTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSSS-EEEEEEEE
T ss_pred CCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCCC-CEEEEeCC
Confidence 1 122233333333333333333333333334456667889999999999999999999999999999998 89999999
Q ss_pred CCCcccccChhcHHHHHHHHhc
Q 024681 242 EGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 242 ~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+||+++.|+|+++.+.|.+||+
T Consensus 247 ~gH~~~~e~p~~~~~~i~~fl~ 268 (271)
T 1wom_A 247 RGHCPHMSHPDETIQLIGDYLK 268 (271)
T ss_dssp ESSCHHHHCHHHHHHHHHHHHH
T ss_pred CCcCccccCHHHHHHHHHHHHH
Confidence 9999999999999999999986
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=268.44 Aligned_cols=261 Identities=77% Similarity=1.309 Sum_probs=219.5
Q ss_pred cceeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 4 LLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 4 ~~~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
....++|...|+++|+|||+||++++...|..+++.| +||+|+++|+||||.|++...+...+.+++++++|+.++++.
T Consensus 7 ~~~~l~~~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
T 4dnp_A 7 LLDALNVRVVGSGERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDA 86 (269)
T ss_dssp HHHHTTCEEECSCSSEEEEECCTTCCGGGGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHH
T ss_pred HHHHhhhhhcCCCCCEEEEEeCCCCcHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHh
Confidence 3456889999998899999999999999999999999 999999999999999976333344554599999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
++.++++|+|||+||.+|+.+|.++|++|+++|++++.+.......+...+..................+...+......
T Consensus 87 ~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (269)
T 4dnp_A 87 LGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVG 166 (269)
T ss_dssp TTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHC
T ss_pred cCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhcc
Confidence 99999999999999999999999999999999999998777666666666777777666666666666666655555555
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCC
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (264)
.......+.+........+.............+....+.++++|+++++|++|.++|.+..+.+.+.+++.+++++++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (269)
T 4dnp_A 167 ADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIE 246 (269)
T ss_dssp SSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred CCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCCCceEEEeCCC
Confidence 55555666666666666666666666666677777888899999999999999999999999999999875689999999
Q ss_pred CCcccccChhcHHHHHHHHhcC
Q 024681 243 GHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 243 gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
||+++.++|+++.+.|.+||++
T Consensus 247 gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 247 GHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp SSCHHHHCHHHHHHHHHHHHC-
T ss_pred CCCccccCHHHHHHHHHHHHhh
Confidence 9999999999999999999974
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=265.73 Aligned_cols=248 Identities=24% Similarity=0.366 Sum_probs=181.6
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|...|+ ++|+|||+||++++...|..+++.| ++|+|+++|+||||.|+.+ ...|+ ++++++|+.++++++
T Consensus 15 ~~l~y~~~G~~~~p~lvl~hG~~~~~~~w~~~~~~L~~~~~vi~~D~rG~G~S~~~---~~~~~-~~~~a~dl~~~l~~l 90 (266)
T 3om8_A 15 ASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVP---PGPYT-LARLGEDVLELLDAL 90 (266)
T ss_dssp CEEEEEEESCTTSCEEEEECCTTCCGGGGGGGHHHHHTTCEEEEECCTTSTTSCCC---CSCCC-HHHHHHHHHHHHHHT
T ss_pred cEEEEEecCCCCCCEEEEeCCCccCHHHHHHHHHHhhcCcEEEEEcCCCCCCCCCC---CCCCC-HHHHHHHHHHHHHHh
Confidence 3688999997 4689999999999999999999999 9999999999999999764 23465 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHH--HHHhhhhhhhhhcccccC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFR--AMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 161 (264)
++++++|+||||||.+|+.+|.++|++|+++|++++.+.......+ ......... ............+.....
T Consensus 91 ~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (266)
T 3om8_A 91 EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQW-----DERIAAVLQAEDMSETAAGFLGNWFPPAL 165 (266)
T ss_dssp TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHH-----HHHHHHHHHCSSSHHHHHHHHHHHSCHHH
T ss_pred CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHH-----HHHHHHHHccccHHHHHHHHHHHhcChhh
Confidence 9999999999999999999999999999999999986542211100 000000000 000000000000000000
Q ss_pred CCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecC
Q 024681 162 GADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (264)
........+.+..................+...+....+.++++|+|+|+|++|.++|++..+.+++.+|+ +++++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~-a~~~~i~- 243 (266)
T 3om8_A 166 LERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAG-ARLVTLP- 243 (266)
T ss_dssp HHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT-CEEEEES-
T ss_pred hhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEeC-
Confidence 00111222333333333333333333444445667777889999999999999999999999999999999 8999998
Q ss_pred CCCcccccChhcHHHHHHHHhcC
Q 024681 242 EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 242 ~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+||+++.|+|++|++.|.+||+.
T Consensus 244 ~gH~~~~e~p~~~~~~i~~Fl~~ 266 (266)
T 3om8_A 244 AVHLSNVEFPQAFEGAVLSFLGA 266 (266)
T ss_dssp CCSCHHHHCHHHHHHHHHHHHTC
T ss_pred CCCCccccCHHHHHHHHHHHhcC
Confidence 89999999999999999999963
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=258.50 Aligned_cols=251 Identities=22% Similarity=0.237 Sum_probs=178.3
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|...|++ ++|||+||++++...|..+++.| +||+|+++|+||||.|+.+ ...|+ ++++++|+.+++++++
T Consensus 14 ~l~y~~~g~g-~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~---~~~~~-~~~~a~dl~~~l~~l~ 88 (277)
T 1brt_A 14 DLYYEDHGTG-QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQP---TTGYD-YDTFAADLNTVLETLD 88 (277)
T ss_dssp EEEEEEECSS-SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC---SSCCS-HHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCC-CeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCC---CCCcc-HHHHHHHHHHHHHHhC
Confidence 5789988876 47999999999999999999999 6899999999999999764 23454 9999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCC-ccceeEEecCCCCCCCCC-CCCCC-ccHHHHHHHHHHHHhh----hhhhhhhcc
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPD-LFTKLILIGASPRFLNDE-DYHGG-FEEAEIDKVFRAMEAN----YEAWAYGYA 157 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~ 157 (264)
.++++|+||||||.+++.+|.++|+ +|+++|++++........ ..... ........+....... ...+...+.
T Consensus 89 ~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (277)
T 1brt_A 89 LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFY 168 (277)
T ss_dssp CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHT
T ss_pred CCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHHHh
Confidence 9999999999999999999999999 999999999854321111 11111 1112222211111111 111111111
Q ss_pred cc---cCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH-HHHHHHcCCC
Q 024681 158 PL---AVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA-EYLQRHLGGR 233 (264)
Q Consensus 158 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~ 233 (264)
.. .......+....+..................+ ..+....+.++++|+|+|+|++|.++|.+.. +.+.+.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~- 246 (277)
T 1brt_A 169 NLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPS- 246 (277)
T ss_dssp THHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGT-TCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTT-
T ss_pred hccccccccCCHHHHHHHHHHHhccchHHHHHHHHHH-hccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCCC-
Confidence 10 00011122233332222222222222222223 4455567788999999999999999999888 999999998
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++++.|.+||++
T Consensus 247 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 247 AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999974
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-43 Score=257.47 Aligned_cols=248 Identities=20% Similarity=0.306 Sum_probs=176.5
Q ss_pred eeeEEEEeCC-C--CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-G--DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~g~-~--~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+++|...|+ + +|+|||+||++++...|..+++.| ++|+|+++|+||||.|+.+. ..|+ ++++++|+.++++
T Consensus 12 ~~l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~---~~~~-~~~~~~dl~~~l~ 87 (266)
T 2xua_A 12 TELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPK---GPYT-IEQLTGDVLGLMD 87 (266)
T ss_dssp SEEEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHHHTTSEEEEECCTTSTTSCCCS---SCCC-HHHHHHHHHHHHH
T ss_pred EEEEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHHhcCeEEEEecCCCCCCCCCCC---CCCC-HHHHHHHHHHHHH
Confidence 3688999886 4 689999999999999999999999 88999999999999997642 3454 9999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHH-HHhhhhhhhhhccccc
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRA-MEANYEAWAYGYAPLA 160 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 160 (264)
+++.++++|+||||||.+|+.+|.++|++|+++|++++.+....... + .......... ...........+....
T Consensus 88 ~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (266)
T 2xua_A 88 TLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEV----W-VPRAVKARTEGMHALADAVLPRWFTAD 162 (266)
T ss_dssp HTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHH----H-HHHHHHHHHHCHHHHHHHHHHHHSCHH
T ss_pred hcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHH----H-HHHHHHHHhcChHHHHHHHHHHHcCcc
Confidence 99999999999999999999999999999999999998643211000 0 0000000000 0000000000000000
Q ss_pred CCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec
Q 024681 161 VGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240 (264)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (264)
.....+...+.+...+..................+....+.++++|+++|+|++|.++|++..+.+.+.+++ +++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~ 241 (266)
T 2xua_A 163 YMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAG-ARYVELD 241 (266)
T ss_dssp HHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT-CEEEEES
T ss_pred cccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhCCC-CEEEEec
Confidence 000011122222222222222222222222223355667788999999999999999999999999999999 8999999
Q ss_pred CCCCcccccChhcHHHHHHHHhcC
Q 024681 241 IEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+||+++.|+|+++++.|.+||++
T Consensus 242 -~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 242 -ASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp -CCSSHHHHTHHHHHHHHHHHHTC
T ss_pred -CCCCchhcCHHHHHHHHHHHHHh
Confidence 99999999999999999999964
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=256.31 Aligned_cols=253 Identities=21% Similarity=0.286 Sum_probs=177.0
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|...|++ ++|||+||++++...|..+++.| +||+|+++|+||||.|+.+ ...|+ ++++++|+.++++.+
T Consensus 17 ~~l~y~~~G~g-~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~~-~~~~a~dl~~ll~~l 91 (281)
T 3fob_A 17 IEIYYEDHGTG-KPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQP---WEGYE-YDTFTSDLHQLLEQL 91 (281)
T ss_dssp EEEEEEEESSS-EEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCC---SSCCS-HHHHHHHHHHHHHHT
T ss_pred eEEEEEECCCC-CeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCC---ccccC-HHHHHHHHHHHHHHc
Confidence 36899999976 58999999999999999999998 7899999999999999764 23454 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHh-CCCccceeEEecCCCCCCC-CCCCCCC-ccHHHHHHHHHHHHhh----hhhhhhhc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIR-RPDLFTKLILIGASPRFLN-DEDYHGG-FEEAEIDKVFRAMEAN----YEAWAYGY 156 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~ 156 (264)
+.++++|+||||||.+++.++.. .|++++++|++++.+.... ....... ........+....... ...+...+
T Consensus 92 ~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (281)
T 3fob_A 92 ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGF 171 (281)
T ss_dssp TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHHHh
Confidence 99999999999999988776665 5899999999997643321 1111111 1111122111111111 11111111
Q ss_pred cccc-CCCCChH-HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH-HHHHHHcCCC
Q 024681 157 APLA-VGADVPA-AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA-EYLQRHLGGR 233 (264)
Q Consensus 157 ~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~ 233 (264)
.... ......+ .............+.........+...+....+.++++|+|+|+|++|.++|.+.. +.+.+.+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~- 250 (281)
T 3fob_A 172 FAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPN- 250 (281)
T ss_dssp TCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTT-
T ss_pred cccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhCCC-
Confidence 1110 0111111 11111122222222223333333344566677899999999999999999998865 777888999
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++++.|.+||++
T Consensus 251 ~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 281 (281)
T 3fob_A 251 SKVALIKGGPHGLNATHAKEFNEALLLFLKD 281 (281)
T ss_dssp CEEEEETTCCTTHHHHTHHHHHHHHHHHHCC
T ss_pred ceEEEeCCCCCchhhhhHHHHHHHHHHHhhC
Confidence 8999999999999999999999999999974
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=261.22 Aligned_cols=246 Identities=20% Similarity=0.299 Sum_probs=173.2
Q ss_pred eeEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 7 ~~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.|+|+..|+ ++|+|||+||++++...|..+.+.| ++|+|+++|+||||.|+... ...|+ ++++++|+.++++.
T Consensus 2 ~i~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~--~~~~~-~~~~a~dl~~~l~~ 78 (268)
T 3v48_A 2 HMKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTL--AEDYS-IAQMAAELHQALVA 78 (268)
T ss_dssp CSCCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHHTTSEEEECCCTTBTTBCCCC--CTTCC-HHHHHHHHHHHHHH
T ss_pred ceEEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHhhcCeEEEECCCCCCCCCCCc--cccCC-HHHHHHHHHHHHHH
Confidence 467888775 4589999999999999999999999 99999999999999997541 23454 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH-hhhhhhhhh-----c
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME-ANYEAWAYG-----Y 156 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~ 156 (264)
++.++++|+||||||.+|+.+|.++|++|+++|++++...... .............. .....+... +
T Consensus 79 l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (268)
T 3v48_A 79 AGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINA-------HTRRCFQVRERLLYSGGAQAWVEAQPLFLY 151 (268)
T ss_dssp TTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccch-------hhhHHHHHHHHHHhccchhhhhhhhhhhcC
Confidence 9999999999999999999999999999999999997533210 00000000000000 000000000 0
Q ss_pred ccccCCCCChHHHHHHHHhhccc-CchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCce
Q 024681 157 APLAVGADVPAAVREFSRTLFNM-RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT 235 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 235 (264)
....................... ...............+....+.++++|+|+|+|++|.++|.+..+.+.+.+++ ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~-~~ 230 (268)
T 3v48_A 152 PADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPD-SQ 230 (268)
T ss_dssp CHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSS-EE
T ss_pred chhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCc-Ce
Confidence 00000000000111111111111 11111222222333455667888999999999999999999999999999999 89
Q ss_pred EEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 236 VELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++++||+++.|+|+++++.|.+||+
T Consensus 231 ~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 258 (268)
T 3v48_A 231 KMVMPYGGHACNVTDPETFNALLLNGLA 258 (268)
T ss_dssp EEEESSCCTTHHHHCHHHHHHHHHHHHH
T ss_pred EEEeCCCCcchhhcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999986
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=251.20 Aligned_cols=253 Identities=17% Similarity=0.218 Sum_probs=174.4
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+++|...|+ ..|+|||+||++++...|..+++.| +||+|+++|+||||.|+.+ ...|+ ++++++|+.++++++
T Consensus 11 ~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~---~~~~~-~~~~~~d~~~~l~~l 86 (276)
T 1zoi_A 11 QIFYKDWGPRDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQV---WDGHD-MDHYADDVAAVVAHL 86 (276)
T ss_dssp EEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC---SSCCS-HHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCC---CCCCC-HHHHHHHHHHHHHHh
Confidence 678988885 4478999999999999999999999 6899999999999999754 23454 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhC-CCccceeEEecCCCCCCC-CCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc-cc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFLN-DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP-LA 160 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 160 (264)
+.++++|+||||||.+|+.+|.++ |++|+++|++++.+.... ...............+..........+...+.. ..
T Consensus 87 ~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (276)
T 1zoi_A 87 GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPF 166 (276)
T ss_dssp TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTT
T ss_pred CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHhHHHHHHHhhhccc
Confidence 999999999999999999988887 999999999998643221 111111112222222111111111111111100 00
Q ss_pred C-----CC-CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh-hHHHHHHHcCCC
Q 024681 161 V-----GA-DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYLQRHLGGR 233 (264)
Q Consensus 161 ~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~ 233 (264)
+ .. ........+......................+....+.++++|+|+|+|++|.++|.+ ..+.+.+.+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~- 245 (276)
T 1zoi_A 167 YGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPN- 245 (276)
T ss_dssp TTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTT-
T ss_pred cccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCcccChHHHHHHHHhhCCC-
Confidence 0 00 1122222222211111111111222223344555667789999999999999999987 55677788888
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++++.|.+||++
T Consensus 246 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 276 (276)
T 1zoi_A 246 GALKTYKGYPHGMPTTHADVINADLLAFIRS 276 (276)
T ss_dssp EEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred ceEEEcCCCCCchhhhCHHHHHHHHHHHhcC
Confidence 8999999999999999999999999999974
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=250.08 Aligned_cols=252 Identities=17% Similarity=0.262 Sum_probs=173.1
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|...|++ ++|||+||++++...|..+++.| +||+|+++|+||||.|+.+ ...+ +++++++|+.++++.++
T Consensus 10 ~l~y~~~G~g-~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~-~~~~~a~d~~~~l~~l~ 84 (271)
T 3ia2_A 10 QIYFKDWGSG-KPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQP---WTGN-DYDTFADDIAQLIEHLD 84 (271)
T ss_dssp EEEEEEESSS-SEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCC---SSCC-SHHHHHHHHHHHHHHHT
T ss_pred EEEEEccCCC-CeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCC---CCCC-CHHHHHHHHHHHHHHhC
Confidence 6899999976 58999999999999999999998 6899999999999999754 2334 48999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHh-CCCccceeEEecCCCCCCC-CCCCCCCccHHHHHHHHHHHHhhhhhhhh----hccc
Q 024681 85 VNRCAYVGHSVSAMIGLLASIR-RPDLFTKLILIGASPRFLN-DEDYHGGFEEAEIDKVFRAMEANYEAWAY----GYAP 158 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 158 (264)
.++++|+||||||.+++.++.+ .|++|+++|++++.+.... ...............+..........+.. .+..
T Consensus 85 ~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (271)
T 3ia2_A 85 LKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYG 164 (271)
T ss_dssp CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhhHHHHHHHhhHhhhc
Confidence 9999999999999876665555 5899999999997644321 11122222222222222221111111111 1110
Q ss_pred ccCCC-CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHHHHcCCCceE
Q 024681 159 LAVGA-DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQRHLGGRNTV 236 (264)
Q Consensus 159 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~ 236 (264)
..... ...........................+...+....+.++++|+|+|+|++|.++|++. .+.+.+.+++ +++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~-~~~ 243 (271)
T 3ia2_A 165 INKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKG-AEL 243 (271)
T ss_dssp GGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTT-CEE
T ss_pred cccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCCcCChHHHHHHHHHhCCC-ceE
Confidence 00011 11111111111111111222222222233445666788999999999999999999887 4556677788 899
Q ss_pred EEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 237 ELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++++++||+++.|+|+++++.|.+||++
T Consensus 244 ~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 244 KVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp EEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred EEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999975
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=247.49 Aligned_cols=252 Identities=17% Similarity=0.236 Sum_probs=172.9
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|...|++ |+|||+||++++...|..+++.| .||+|+++|+||||.|+.+ ...|+ ++++++|+.+++++++
T Consensus 10 ~l~y~~~g~g-~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~~-~~~~~~dl~~~l~~l~ 84 (274)
T 1a8q_A 10 EIFYKDWGQG-RPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPV---WDGYD-FDTFADDLNDLLTDLD 84 (274)
T ss_dssp EEEEEEECSS-SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC---SSCCS-HHHHHHHHHHHHHHTT
T ss_pred EEEEEecCCC-ceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCC---CCCCc-HHHHHHHHHHHHHHcC
Confidence 6789888865 68999999999999999999999 6899999999999999754 23454 9999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhC-CCccceeEEecCCCCCCC-CCCCCCCccHHHHHHHHHHHHhh----hhhhhhhccc
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFLN-DEDYHGGFEEAEIDKVFRAMEAN----YEAWAYGYAP 158 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 158 (264)
.++++|+||||||.+++.+|.++ |++|+++|++++.+.... ...............+....... ...+...+..
T Consensus 85 ~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (274)
T 1a8q_A 85 LRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFS 164 (274)
T ss_dssp CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhccHHHHHHHhcccccc
Confidence 99999999999999999988776 999999999998543211 11111112222222111111111 1111111111
Q ss_pred cc-CC-CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh-hHHHHHHHcCCCce
Q 024681 159 LA-VG-ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYLQRHLGGRNT 235 (264)
Q Consensus 159 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~ 235 (264)
.. .. .......+.+..................+...+....+.++++|+|+|+|++|.++|.+ ..+.+.+.+++ ++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~-~~ 243 (274)
T 1a8q_A 165 ANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPN-AE 243 (274)
T ss_dssp TTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTT-CE
T ss_pred cccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCCCCcHHHHHHHHhhCCC-ce
Confidence 00 00 01122222222221111111111122222234455667889999999999999999988 45667778888 89
Q ss_pred EEEecCCCCccccc--ChhcHHHHHHHHhcC
Q 024681 236 VELLKIEGHLPHLS--APAIVGPVIRRALSR 264 (264)
Q Consensus 236 ~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~ 264 (264)
+++++++||+++.| +|+++++.|.+||++
T Consensus 244 ~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~~ 274 (274)
T 1a8q_A 244 LKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp EEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred EEEECCCCCceecccCCHHHHHHHHHHHhcC
Confidence 99999999999999 999999999999974
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=257.17 Aligned_cols=257 Identities=32% Similarity=0.609 Sum_probs=205.0
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
.+++|...|+++|+|||+||++++...|..+++.| +||+|+++|+||||.|.....+...+.+++++++|+.++++.++
T Consensus 17 ~~~~~~~~g~~~~~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (282)
T 3qvm_A 17 KRNNINITGGGEKTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALD 96 (282)
T ss_dssp HHTTCEEEECSSCEEEEECCTTCCGGGGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTT
T ss_pred hhcceeecCCCCCeEEEECCCCCCcchHHHHHHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcC
Confidence 45678888988789999999999999999999999 99999999999999997654334466569999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC-CCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE-DYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
.++++++|||+||.+++.+|.++|++++++|++++.+...... .+...+..................+...+.......
T Consensus 97 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (282)
T 3qvm_A 97 LVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGA 176 (282)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCT
T ss_pred CCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCC
Confidence 9999999999999999999999999999999999876543322 344445555555555555444444443333333222
Q ss_pred C-ChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCC
Q 024681 164 D-VPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242 (264)
Q Consensus 164 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (264)
. .......+...+....+.............+....+.++++|+++++|++|.++|.+..+.+.+.+++ +++++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~ 255 (282)
T 3qvm_A 177 SHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPN-SQLELIQAE 255 (282)
T ss_dssp TSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSSS-EEEEEEEEE
T ss_pred ccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCCC-CcEEEecCC
Confidence 2 23344555555555555555666666666677778889999999999999999999999999999998 899999999
Q ss_pred CCcccccChhcHHHHHHHHhc
Q 024681 243 GHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 243 gH~~~~~~~~~~~~~i~~fl~ 263 (264)
||+++.++|+++.+.|.+||+
T Consensus 256 gH~~~~~~~~~~~~~i~~fl~ 276 (282)
T 3qvm_A 256 GHCLHMTDAGLITPLLIHFIQ 276 (282)
T ss_dssp SSCHHHHCHHHHHHHHHHHHH
T ss_pred CCcccccCHHHHHHHHHHHHH
Confidence 999999999999999999986
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=247.14 Aligned_cols=252 Identities=19% Similarity=0.223 Sum_probs=172.2
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|...|++ |+|||+||++++...|..+++.| +||+|+++|+||||.|+.+ ...++ ++++++|+.+++++++
T Consensus 10 ~l~y~~~g~~-~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~---~~~~~-~~~~~~dl~~~l~~l~ 84 (273)
T 1a8s_A 10 QIYYKDWGSG-QPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQP---WSGND-MDTYADDLAQLIEHLD 84 (273)
T ss_dssp EEEEEEESCS-SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC---SSCCS-HHHHHHHHHHHHHHTT
T ss_pred EEEEEEcCCC-CEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCC---CCCCC-HHHHHHHHHHHHHHhC
Confidence 6789888865 68999999999999999999999 6899999999999999754 23454 9999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhC-CCccceeEEecCCCCCCC-CCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc-ccC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFLN-DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP-LAV 161 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 161 (264)
.++++|+||||||.+++.++.++ |++|+++|++++.+.... ...............+..........+...+.. ...
T Consensus 85 ~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (273)
T 1a8s_A 85 LRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFF 164 (273)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhhHHHHHHHhhccccc
Confidence 99999999999999999977776 999999999998543221 111111122222221111111111111111100 000
Q ss_pred -----C-CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh-hHHHHHHHcCCCc
Q 024681 162 -----G-ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYLQRHLGGRN 234 (264)
Q Consensus 162 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~ 234 (264)
. .........+......................+....+.++++|+|+++|++|.++|.+ ..+.+.+.+++ +
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~-~ 243 (273)
T 1a8s_A 165 GFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKG-S 243 (273)
T ss_dssp STTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTT-C
T ss_pred CcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCccCChHHHHHHHHHhCCC-c
Confidence 0 01122222222111111111111112222233445567789999999999999999987 55667778888 8
Q ss_pred eEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 235 TVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 235 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++++++++||+++.++|+++.+.|.+||++
T Consensus 244 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 244 TLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp EEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred EEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999974
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=246.51 Aligned_cols=253 Identities=17% Similarity=0.216 Sum_probs=172.3
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+++|...|+ +.|+|||+||++++...|..+++.| +||+|+++|+||||.|+.+ ...++ ++++++|+.++++++
T Consensus 10 ~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~~-~~~~~~dl~~~l~~l 85 (275)
T 1a88_A 10 NIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQP---STGHD-MDTYAADVAALTEAL 85 (275)
T ss_dssp EEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC---SSCCS-HHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCC---CCCCC-HHHHHHHHHHHHHHc
Confidence 678998884 4478999999999999999999999 6899999999999999754 23454 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhC-CCccceeEEecCCCCCCCC-CCCCCCccHHHHHHHHHHHHhhhhhhhhhccc-cc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFLND-EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP-LA 160 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 160 (264)
+.++++|+||||||.+++.++.++ |++|+++|++++.+..... ..............+..........+...+.. ..
T Consensus 86 ~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (275)
T 1a88_A 86 DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPF 165 (275)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTT
T ss_pred CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhhHHHHHHhhhcccc
Confidence 999999999999999999988776 9999999999985432211 11111122222222211111111111111100 00
Q ss_pred C-----C-CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh-hHHHHHHHcCCC
Q 024681 161 V-----G-ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYLQRHLGGR 233 (264)
Q Consensus 161 ~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~ 233 (264)
+ . .........+......................+....+.++++|+++++|++|.++|.+ ..+.+.+.+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~- 244 (275)
T 1a88_A 166 YGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLAN- 244 (275)
T ss_dssp TTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTT-
T ss_pred ccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCCccCCcHHHHHHHHhhCCC-
Confidence 0 0 01122222222211111111111111122223445567788999999999999999987 45667778888
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++++.|.+||++
T Consensus 245 ~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 245 ATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp EEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred cEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 8999999999999999999999999999974
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=250.20 Aligned_cols=252 Identities=20% Similarity=0.233 Sum_probs=176.9
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
..++|...|++ ++|||+||++++...|..+++.| +||+|+++|+||||.|+... ..|+ ++++++|+.++++.+
T Consensus 13 ~~l~y~~~g~~-~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~---~~~~-~~~~~~dl~~~l~~l 87 (279)
T 1hkh_A 13 IELYYEDQGSG-QPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVN---TGYD-YDTFAADLHTVLETL 87 (279)
T ss_dssp EEEEEEEESSS-EEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCS---SCCS-HHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCC-CcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCC---CCCC-HHHHHHHHHHHHHhc
Confidence 35788888865 57999999999999999999999 68999999999999997642 3454 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCC-ccceeEEecCCCCCCCCC-CCCCCccHHHHHHHHHHHHhhh----hhhhhhcc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPD-LFTKLILIGASPRFLNDE-DYHGGFEEAEIDKVFRAMEANY----EAWAYGYA 157 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 157 (264)
+.++++|+||||||.+++.+|.++|+ +|+++|++++........ .............+........ ..+...+.
T Consensus 88 ~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (279)
T 1hkh_A 88 DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFY 167 (279)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhh
Confidence 99999999999999999999999998 999999999854322111 1111111122211111111100 11111000
Q ss_pred cc---cCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCc---ccCEEEEecCCCCCcchhhH-HHHHHHc
Q 024681 158 PL---AVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLV---RVPCVIIQTSKDVSVPVSVA-EYLQRHL 230 (264)
Q Consensus 158 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~P~l~i~g~~D~~~~~~~~-~~~~~~~ 230 (264)
.. ............+..................+ ..+....+.++ ++|+|+++|++|.++|.+.. +.+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~ 246 (279)
T 1hkh_A 168 NLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAW-IEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV 246 (279)
T ss_dssp THHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHH-TCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHC
T ss_pred hcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHH-hhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhC
Confidence 00 00011122223222222222222222222223 34455566777 99999999999999998887 8899999
Q ss_pred CCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 231 GGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 231 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++ +++++++++||+++.|+|+++++.|.+||++
T Consensus 247 ~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 247 PE-ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp TT-SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CC-eeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 98 8999999999999999999999999999974
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=248.80 Aligned_cols=248 Identities=19% Similarity=0.304 Sum_probs=170.4
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
.+++|...|+++++|||+||++++...|..+++.| ++|+|+++|+||||.|+.. ..++ ++++++++.+ .++
T Consensus 2 ~~l~~~~~G~g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~----~~~~-~~~~~~~l~~---~l~ 73 (258)
T 1m33_A 2 NNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGF----GALS-LADMAEAVLQ---QAP 73 (258)
T ss_dssp -CCCEEEECCCSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSC----CCCC-HHHHHHHHHT---TSC
T ss_pred cceEEEEecCCCCeEEEECCCCCChHHHHHHHHHhhcCcEEEEeeCCCCCCCCCC----CCcC-HHHHHHHHHH---HhC
Confidence 46889999987438999999999999999999999 9999999999999999764 2454 8887776654 445
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc-ccCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP-LAVGA 163 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 163 (264)
++++|+||||||.+|+.+|.++|++|+++|++++.+.+.....+. .........+...+..........+.. .....
T Consensus 74 -~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (258)
T 1m33_A 74 -DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWP-GIKPDVLAGFQQQLSDDQQRTVERFLALQTMGT 151 (258)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBC-SBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTS
T ss_pred -CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCcccccccc-CCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCC
Confidence 799999999999999999999999999999999875443322222 222222222222221111111111111 11111
Q ss_pred CCh-HHHHHHHHhhcccC---chhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEe
Q 024681 164 DVP-AAVREFSRTLFNMR---PDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELL 239 (264)
Q Consensus 164 ~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 239 (264)
... .....+........ ..............+....+.++++|+++|+|++|.++|.+..+.+.+.+++ ++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i 230 (258)
T 1m33_A 152 ETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIF 230 (258)
T ss_dssp TTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTT-CEEEEE
T ss_pred ccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCcc-ceEEEe
Confidence 111 12222222211111 1111222222223345566778899999999999999999988889888888 899999
Q ss_pred cCCCCcccccChhcHHHHHHHHhcC
Q 024681 240 KIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 240 ~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++||+++.|+|+++++.|.+||++
T Consensus 231 ~~~gH~~~~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 231 AKAAHAPFISHPAEFCHLLVALKQR 255 (258)
T ss_dssp TTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred CCCCCCccccCHHHHHHHHHHHHHh
Confidence 9999999999999999999999964
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=248.96 Aligned_cols=248 Identities=16% Similarity=0.182 Sum_probs=173.2
Q ss_pred eeeEEEEeCCCCceEEEecCCC---CChhhHHHhh-hhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFG---TDQSAWQRIL-PYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~---~~~~~~~~~~-~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
.+++|...|++ |+|||+||++ ++...|..++ +.| ++|+|+++|+||||.|+.+. ...| +++++++|+.+++
T Consensus 23 ~~l~y~~~G~g-~~vvllHG~~~~~~~~~~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~--~~~~-~~~~~a~dl~~~l 98 (286)
T 2puj_A 23 FNIHYNEAGNG-ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVV--MDEQ-RGLVNARAVKGLM 98 (286)
T ss_dssp EEEEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCC--CSSC-HHHHHHHHHHHHH
T ss_pred EEEEEEecCCC-CcEEEECCCCCCCCcHHHHHHHHHHHHhccCEEEEECCCCCCCCCCCC--CcCc-CHHHHHHHHHHHH
Confidence 46889999875 6899999998 7788999999 999 88999999999999997642 1245 4999999999999
Q ss_pred HHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh----hhhhhhhhc
Q 024681 81 DTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA----NYEAWAYGY 156 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 156 (264)
+++++++++|+||||||.+|+.+|.++|++|+++|++++...... .+.. ............... ....+....
T Consensus 99 ~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (286)
T 2puj_A 99 DALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPS--MFAP-MPMEGIKLLFKLYAEPSYETLKQMLQVF 175 (286)
T ss_dssp HHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCC--SSSC-SSCHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred HHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCC--cccc-cchhhHHHHHHHhhCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998643211 0100 011111111111110 011111111
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhh-----cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTV-----FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
.... .....+......... ...+.......... ...+....+.++++|+|+|+|++|.++|.+..+.+++.++
T Consensus 176 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~ 253 (286)
T 2puj_A 176 LYDQ-SLITEELLQGRWEAI-QRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID 253 (286)
T ss_dssp CSCG-GGCCHHHHHHHHHHH-HHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSS
T ss_pred hcCC-ccCCHHHHHHHHHHh-hcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCC
Confidence 0000 000111121111101 11122111111111 1123445678899999999999999999999999999999
Q ss_pred CCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 232 GRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+ +++++++++||+++.|+|+++++.|.+||+
T Consensus 254 ~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 284 (286)
T 2puj_A 254 D-ARLHVFSKCGAWAQWEHADEFNRLVIDFLR 284 (286)
T ss_dssp S-EEEEEESSCCSCHHHHTHHHHHHHHHHHHH
T ss_pred C-CeEEEeCCCCCCccccCHHHHHHHHHHHHh
Confidence 8 899999999999999999999999999986
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=246.84 Aligned_cols=249 Identities=17% Similarity=0.171 Sum_probs=173.1
Q ss_pred eeeEEEEeCCCC-ceEEEecCCC---CChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGD-RILVLAHGFG---TDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 6 ~~~~~~~~g~~~-p~vv~~hG~~---~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
.+++|...|+++ |+|||+||++ ++...|..+++.| ++|+|+++|+||||.|+.+. ...| +++++++|+.+++
T Consensus 24 ~~l~y~~~G~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~--~~~~-~~~~~a~dl~~~l 100 (291)
T 2wue_A 24 LKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRA--EHGQ-FNRYAAMALKGLF 100 (291)
T ss_dssp EEEEEEEECTTCSSEEEEECCCCTTCCHHHHTTTTHHHHTTTSEEEEECCTTSTTSCCCS--CCSS-HHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCcEEEECCCCCccchHHHHHHHHHHHHhcCEEEEECCCCCCCCCCCC--CCCc-CHHHHHHHHHHHH
Confidence 468899888753 4999999998 7788999999999 88999999999999997642 1245 4999999999999
Q ss_pred HHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh----hhhhhhhhc
Q 024681 81 DTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA----NYEAWAYGY 156 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 156 (264)
++++.++++|+||||||.+|+.+|.++|++|+++|++++...... .+.... ............. ....+...+
T Consensus 101 ~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (291)
T 2wue_A 101 DQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSIN--LFAPDP-TEGVKRLSKFSVAPTRENLEAFLRVM 177 (291)
T ss_dssp HHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCC--SSSCSS-CHHHHHHHHHHHSCCHHHHHHHHHTS
T ss_pred HHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCcc--cccccc-chhhHHHHHHhccCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998643211 011000 1111111111110 111111111
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhh---hcC-----CccccccCCcccCEEEEecCCCCCcchhhHHHHHH
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKT---VFD-----TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR 228 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 228 (264)
.... ....++......... ..+......... ... ......+.++++|+|+|+|++|.++|.+..+.+++
T Consensus 178 ~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~ 254 (291)
T 2wue_A 178 VYDK-NLITPELVDQRFALA--STPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALK 254 (291)
T ss_dssp CSSG-GGSCHHHHHHHHHHH--TSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHHHHH
T ss_pred ccCc-ccCCHHHHHHHHHHh--cCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHHHHHHHHH
Confidence 0000 000112222222211 112211111111 111 11225678899999999999999999999999999
Q ss_pred HcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 229 HLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 229 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+++ +++++++++||+++.|+|+++++.|.+||++
T Consensus 255 ~~p~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 255 TIPR-AQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp HSTT-EEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred HCCC-CeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9998 8999999999999999999999999999964
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-41 Score=248.99 Aligned_cols=248 Identities=21% Similarity=0.206 Sum_probs=170.1
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChh-hHHHhhhhc-CCceEEEecCCCCCCCCC-CCCCCcccchHHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQS-AWQRILPYL-NHHRVIMFDLVCAGSVNP-DYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~-~~~~~~~~l-~g~~v~~~d~~g~G~s~~-~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
+++|...|+ ++|+|||+||++++.. .|..+++.| ++|+|+++|+||||.|+. +. ....|+ ++++++|+.++++.
T Consensus 14 ~l~~~~~G~~~~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~-~~~~~~-~~~~a~dl~~ll~~ 91 (286)
T 2yys_A 14 ELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQ-DPRLFT-VDALVEDTLLLAEA 91 (286)
T ss_dssp EEEEEEESCTTSCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTTSCCCCS-CGGGCC-HHHHHHHHHHHHHH
T ss_pred EEEEEeecCCCCCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCCCCCCcc-CcccCc-HHHHHHHHHHHHHH
Confidence 688998885 4579999999999999 899999999 999999999999999975 31 111454 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC-CCC-----CCccHHHHHHHHHHHH-hhhhhhhhh
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE-DYH-----GGFEEAEIDKVFRAME-ANYEAWAYG 155 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~ 155 (264)
++.++++|+||||||.+|+.+|.++|+ |+++|++++.+...... ... ..... ....+..... .....+...
T Consensus 92 l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (286)
T 2yys_A 92 LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPD-PEENLKEALKREEPKALFDR 169 (286)
T ss_dssp TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSC-HHHHHHHHHHHSCHHHHHHH
T ss_pred hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchh-HHHHHHHHhccCChHHHHHh
Confidence 999999999999999999999999999 99999999864110000 000 00000 0000000000 001111111
Q ss_pred cccccCCCCChHHHHHHHHh-hccc-Cchhhhh-hhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC
Q 024681 156 YAPLAVGADVPAAVREFSRT-LFNM-RPDISLF-VSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~-~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 232 (264)
+. ..... .......... .... .+..... ........+....+.++++|+|+|+|++|.+++.+ .+.+.+ +++
T Consensus 170 ~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~-~~~ 244 (286)
T 2yys_A 170 LM--FPTPR-GRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTSYPY-AEEVAS-RLR 244 (286)
T ss_dssp HH--CSSHH-HHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEEEEEETTCTTTTTT-HHHHHH-HHT
T ss_pred hh--ccCCc-cccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEEEEEeCCCCcCCHh-HHHHHh-CCC
Confidence 11 00000 0011111111 1111 1111111 12222233456678899999999999999999999 999999 998
Q ss_pred CceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 233 RNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++++.|.+||++
T Consensus 245 -~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (286)
T 2yys_A 245 -APIRVLPEAGHYLWIDAPEAFEEAFKEALAA 275 (286)
T ss_dssp -CCEEEETTCCSSHHHHCHHHHHHHHHHHHHT
T ss_pred -CCEEEeCCCCCCcChhhHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999863
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=243.24 Aligned_cols=239 Identities=18% Similarity=0.244 Sum_probs=168.3
Q ss_pred eeEEEEeCC----CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT----GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g~----~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
+++|...|+ ++|+|||+||++++...|..+++.| +.|+|+++|+||||.|+.. ..+ +++++++|+.++++
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~----~~~-~~~~~a~dl~~~l~ 76 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPRE----PVM-NYPAMAQDLVDTLD 76 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHHTTTSCEEEECCTTSTTSCCC----SCC-CHHHHHHHHHHHHH
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHHHhhCcEEEecCCCCCCCCCC----CCc-CHHHHHHHHHHHHH
Confidence 578999985 4579999999999999999999999 8899999999999999764 234 48999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hh---hhhhhhcc
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NY---EAWAYGYA 157 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~ 157 (264)
.++.++++|+||||||.+|+.+|.++|++|+++|++++.+....... .......+ ..... .. ......+.
T Consensus 77 ~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 150 (255)
T 3bf7_A 77 ALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRR-----HDEIFAAI-NAVSESDAQTRQQAAAIMR 150 (255)
T ss_dssp HHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCC-----CHHHHHHH-HHHHHSCCCSHHHHHHHHT
T ss_pred HcCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCccc-----HHHHHHHH-HhccccccccHHHHHHHHh
Confidence 99999999999999999999999999999999999986543221110 01111111 11100 00 00000000
Q ss_pred cccCCCCChHHHHHHH-Hhhcc----cCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC
Q 024681 158 PLAVGADVPAAVREFS-RTLFN----MRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 232 (264)
... .......+. ..... ............... ...+.++++|+++|+|++|.+++++..+.+.+.+++
T Consensus 151 -~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 223 (255)
T 3bf7_A 151 -QHL---NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVG---WEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQ 223 (255)
T ss_dssp -TTC---CCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHC---CCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCTT
T ss_pred -hhc---chhHHHHHHHHhccCCceeecHHHHHhhhhhccc---cccccccCCCeEEEECCCCCCCCHHHHHHHHHHCCC
Confidence 000 011111111 11100 000111111111111 123568899999999999999999999999999998
Q ss_pred CceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 233 RNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++.+.|.+||++
T Consensus 224 -~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 224 -ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp -EEECCBTTCCSCHHHHCHHHHHHHHHHHHHT
T ss_pred -CeEEEeCCCCCccccCCHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999964
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=248.41 Aligned_cols=250 Identities=18% Similarity=0.195 Sum_probs=172.9
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
.+++|.+.|+++ +|||+||++++...|..+++.| ++|+|+++|+||||.|+.... ..|+ ++++++|+.+++++++
T Consensus 6 ~~~~y~~~G~g~-~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~--~~~~-~~~~~~dl~~~l~~l~ 81 (269)
T 2xmz_A 6 YKFYEANVETNQ-VLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSSMD--ETWN-FDYITTLLDRILDKYK 81 (269)
T ss_dssp EEEECCSSCCSE-EEEEECCTTCCGGGGTTTHHHHHTTSEEEEECCTTSTTCCCCTT--SCCC-HHHHHHHHHHHHGGGT
T ss_pred ceEEEEEcCCCC-eEEEEcCCCCcHHHHHHHHHHHhhcCeEEEecCCCCCCCCCCCC--CccC-HHHHHHHHHHHHHHcC
Confidence 467888888774 7999999999999999999999 889999999999999976421 1454 9999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH-hhhhhhhhhcccc-cCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME-ANYEAWAYGYAPL-AVG 162 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~ 162 (264)
.++++|+||||||.+|+.+|.++|++|+++|++++.+........ .............+. .....+...+... .+.
T Consensus 82 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (269)
T 2xmz_A 82 DKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQ--LERRLVDDARAKVLDIAGIELFVNDWEKLPLFQ 159 (269)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHH--HHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGG
T ss_pred CCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhH--HHHhhhhhHHHHhhccccHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999985432110000 000000000111110 1111111111110 011
Q ss_pred C---CChHHHHHHHHhhcccCchhhhhhhhh---hcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE
Q 024681 163 A---DVPAAVREFSRTLFNMRPDISLFVSKT---VFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236 (264)
Q Consensus 163 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 236 (264)
. ........+........+......... ....+....+.++++|+++|+|++|.+++.+..+ +.+.+++ +++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~~-~~~ 237 (269)
T 2xmz_A 160 SQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLIPN-SKC 237 (269)
T ss_dssp GGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHSTT-EEE
T ss_pred ccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhCCC-cEE
Confidence 0 012222222222222222222222211 1223445677889999999999999999887765 8888998 899
Q ss_pred EEecCCCCcccccChhcHHHHHHHHhc
Q 024681 237 ELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
++++++||+++.|+|+++.+.|.+||+
T Consensus 238 ~~i~~~gH~~~~e~p~~~~~~i~~fl~ 264 (269)
T 2xmz_A 238 KLISATGHTIHVEDSDEFDTMILGFLK 264 (269)
T ss_dssp EEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred EEeCCCCCChhhcCHHHHHHHHHHHHH
Confidence 999999999999999999999999986
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=243.76 Aligned_cols=254 Identities=19% Similarity=0.221 Sum_probs=168.7
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCC-CCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYF-DFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|...|++ |+|||+||++++...|..+++.| +.|+|+++|+||||.|+.+.. +...|+ ++++++|+.+++++++
T Consensus 20 ~l~y~~~G~g-~~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~-~~~~a~dl~~ll~~l~ 97 (294)
T 1ehy_A 20 KIHYVREGAG-PTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYS-LDKAADDQAALLDALG 97 (294)
T ss_dssp EEEEEEEECS-SEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGC-HHHHHHHHHHHHHHTT
T ss_pred EEEEEEcCCC-CEEEEECCCCcchhhHHHHHHHHhhcCEEEecCCCCCCCCCCCccccccCcC-HHHHHHHHHHHHHHcC
Confidence 6889888855 68999999999999999999999 889999999999999986410 012565 9999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCc---cHH-HHH--HHHHHHHhh-h---hhhhh
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGF---EEA-EID--KVFRAMEAN-Y---EAWAY 154 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~---~~~-~~~--~~~~~~~~~-~---~~~~~ 154 (264)
+++++|+||||||.+|+.+|.++|++|+++|+++++............. ... ... ......... . ..+..
T Consensus 98 ~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (294)
T 1ehy_A 98 IEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFK 177 (294)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHHHHHHTSCHHHHHHHHH
T ss_pred CCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcchhHHHhccchhHHHHHHH
Confidence 9999999999999999999999999999999999742211111000000 000 000 000000000 0 01111
Q ss_pred hcccccC---CCCChHHHHHHHHhhcccCch-hhhhhhhhhcCCcc----ccccCCcccCEEEEecCCCCCcc-hhhHHH
Q 024681 155 GYAPLAV---GADVPAAVREFSRTLFNMRPD-ISLFVSKTVFDTDL----RGILGLVRVPCVIIQTSKDVSVP-VSVAEY 225 (264)
Q Consensus 155 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~i~~P~l~i~g~~D~~~~-~~~~~~ 225 (264)
.+..... .....+....+.......... ....+......... ...+.++++|+|+|+|++|.++| ....+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~ 257 (294)
T 1ehy_A 178 HFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEF 257 (294)
T ss_dssp HHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHH
T ss_pred HHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEEEEEeCCCCCcchHHHHHH
Confidence 1111000 011122233333332211110 00111111111111 12345899999999999999998 467788
Q ss_pred HHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 226 LQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 226 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+.+.+++ +++++++++||+++.|+|+++++.|.+||+
T Consensus 258 ~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 294 (294)
T 1ehy_A 258 VPKYYSN-YTMETIEDCGHFLMVEKPEIAIDRIKTAFR 294 (294)
T ss_dssp HHHHBSS-EEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred HHHHcCC-CceEEeCCCCCChhhhCHHHHHHHHHHHhC
Confidence 8888998 899999999999999999999999999984
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-41 Score=252.83 Aligned_cols=253 Identities=17% Similarity=0.198 Sum_probs=171.8
Q ss_pred eeeEEEEeCCCC-ceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~~~-p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|...|++. |+|||+||++++...|..+++.| ++|+|+++|+||||.|+.+ ...|+ ++++++|+.++++.+
T Consensus 17 ~~l~y~~~G~g~~~pvvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~---~~~~~-~~~~a~dl~~ll~~l 92 (316)
T 3afi_E 17 SSMAYRETGAQDAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKP---DIAYR-FFDHVRYLDAFIEQR 92 (316)
T ss_dssp EEEEEEEESCTTSCEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCC---SSCCC-HHHHHHHHHHHHHHT
T ss_pred EEEEEEEeCCCCCCeEEEECCCCCchHHHHHHHHHHhhCCEEEEECCCCCCCCCCC---CCCCC-HHHHHHHHHHHHHHc
Confidence 368899998752 38999999999999999999999 8899999999999999764 23565 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCC-C-c-cH---HHHHHHHHHHHhhh--------
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG-G-F-EE---AEIDKVFRAMEANY-------- 149 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~-~-~-~~---~~~~~~~~~~~~~~-------- 149 (264)
++++++|+||||||.+|+.+|.++|++|+++|++++............ . . .. .........+....
T Consensus 93 ~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (316)
T 3afi_E 93 GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILE 172 (316)
T ss_dssp TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTSTTHHHHHHTT
T ss_pred CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhcCCchhhHHHhc
Confidence 999999999999999999999999999999999997432100000000 0 0 00 01111111111000
Q ss_pred -hhhhhhcccc-cCCCCChHHHHHHHHhhccc-CchhhhhhhhhhcC-----------CccccccCCcccCEEEEecCCC
Q 024681 150 -EAWAYGYAPL-AVGADVPAAVREFSRTLFNM-RPDISLFVSKTVFD-----------TDLRGILGLVRVPCVIIQTSKD 215 (264)
Q Consensus 150 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~~i~~P~l~i~g~~D 215 (264)
..+....... .......+....+...+... .......+...... .+....+.++++|+|+|+|++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D 252 (316)
T 3afi_E 173 ANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPG 252 (316)
T ss_dssp SCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEEC
T ss_pred cchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhccCCCeEEEecCCC
Confidence 0011111111 11111122222222211100 00001111111100 0112345578999999999999
Q ss_pred CCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 216 VSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.++|.+..+.+.+.+++ +++++++++||+++.|+|+++++.|.+||+
T Consensus 253 ~~~~~~~~~~~~~~~p~-~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 299 (316)
T 3afi_E 253 ALVSPEFAERFAASLTR-CALIRLGAGLHYLQEDHADAIGRSVAGWIA 299 (316)
T ss_dssp SSSCHHHHHHHHHHSSS-EEEEEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHhCCC-CeEEEcCCCCCCchhhCHHHHHHHHHHHHh
Confidence 99999999999999999 899999999999999999999999999986
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=242.42 Aligned_cols=248 Identities=19% Similarity=0.246 Sum_probs=173.4
Q ss_pred eeeEEEEeCCCCceEEEecCCC---CChhhHHHhh-hhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFG---TDQSAWQRIL-PYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~---~~~~~~~~~~-~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
.+++|...|+++++|||+||++ ++...|..++ +.| ++|+|+++|+||||.|+.... ..+ +++++++|+.+++
T Consensus 25 ~~l~y~~~g~g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~--~~~-~~~~~~~~l~~~l 101 (289)
T 1u2e_A 25 LRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVN--SGS-RSDLNARILKSVV 101 (289)
T ss_dssp EEEEEEEECCCSSEEEEECCCSTTCCHHHHTTTTHHHHHHTTCEEEEECCTTSTTSCCCCC--SSC-HHHHHHHHHHHHH
T ss_pred EEEEEeccCCCCceEEEECCCCcccchhHHHHHhhhHHHhcCCeEEEEcCCCCCCCCCCCc--ccc-CHHHHHHHHHHHH
Confidence 5788999998655999999998 6777888888 888 889999999999999976421 245 4999999999999
Q ss_pred HHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh----hhhhhhhhc
Q 024681 81 DTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA----NYEAWAYGY 156 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 156 (264)
+.++.++++|+||||||.+|+.+|.++|++|+++|++++....... ... ............... ....+...
T Consensus 102 ~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~- 177 (289)
T 1u2e_A 102 DQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSL--FTP-MPTEGIKRLNQLYRQPTIENLKLMMDI- 177 (289)
T ss_dssp HHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCS--SSC-SSCHHHHHHHHHHHSCCHHHHHHHHHT-
T ss_pred HHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCcccccc--ccc-cchhhHHHHHHHHhcchHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999986432111 100 011111111111110 01111111
Q ss_pred ccccCCC--CChHHHHHHHHhhcccCchhhhhhhhhh-----cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHH
Q 024681 157 APLAVGA--DVPAAVREFSRTLFNMRPDISLFVSKTV-----FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRH 229 (264)
Q Consensus 157 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 229 (264)
..... ...+......... ...+.......... ...+....+.++++|+|+|+|++|.++|.+..+.+.+.
T Consensus 178 --~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 254 (289)
T 1u2e_A 178 --FVFDTSDLTDALFEARLNNM-LSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSG 254 (289)
T ss_dssp --TSSCTTSCCHHHHHHHHHHH-HHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHH
T ss_pred --hhcCcccCCHHHHHHHHHHh-hcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhh
Confidence 11111 1112221111111 11121121111111 12234456778999999999999999999999999999
Q ss_pred cCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 230 LGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 230 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++ +++++++++||+++.|+|+++.+.|.+||++
T Consensus 255 ~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 255 IAG-SELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp STT-CEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred CCC-cEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 998 8999999999999999999999999999974
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-40 Score=243.88 Aligned_cols=243 Identities=18% Similarity=0.260 Sum_probs=166.9
Q ss_pred eeeEEEEeCCCCceEEEecCCCCCh---hhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQ---SAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~---~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+++|...|++ |+|||+||++.+. ..|..+++.| ++|+|+++|+||||.|+.+. ...|+ ++++++|+.++++
T Consensus 15 ~~l~y~~~G~g-~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~--~~~~~-~~~~a~dl~~~l~ 90 (282)
T 1iup_A 15 VLTNYHDVGEG-QPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPE--NYNYS-KDSWVDHIIGIMD 90 (282)
T ss_dssp EEEEEEEECCS-SEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCT--TCCCC-HHHHHHHHHHHHH
T ss_pred EEEEEEecCCC-CeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCC--CCCCC-HHHHHHHHHHHHH
Confidence 36889998875 5899999987544 3788888889 99999999999999997642 12454 9999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHH--HHhhhhhhhhhcccc
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRA--MEANYEAWAYGYAPL 159 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 159 (264)
+++.++++|+||||||.+|+.+|.++|++|+++|++++....... .......... .......+...+...
T Consensus 91 ~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T 1iup_A 91 ALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDV--------TEGLNAVWGYTPSIENMRNLLDIFAYD 162 (282)
T ss_dssp HTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCC--------CHHHHHHHTCCSCHHHHHHHHHHHCSS
T ss_pred HhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCC--------CHHHHHHhcCCCcHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999986432110 0000000000 000000111100000
Q ss_pred cCCCCChHHHHHHHHhhcccCchhhhhhhhhhc---------CCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 160 AVGADVPAAVREFSRTLFNMRPDISLFVSKTVF---------DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
. .....+.......... .+.....+..... .......+.++++|+|+|+|++|.++|.+..+.+.+.+
T Consensus 163 ~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~ 239 (282)
T 1iup_A 163 R-SLVTDELARLRYEASI--QPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI 239 (282)
T ss_dssp G-GGCCHHHHHHHHHHHT--STTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred c-ccCCHHHHHHHHhhcc--ChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhC
Confidence 0 0001111111111110 1111110000000 00012567889999999999999999999999999999
Q ss_pred CCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 231 GGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 231 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++ +++++++++||+++.|+|+++.+.|.+||++
T Consensus 240 ~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 240 DR-AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp TT-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred CC-CeEEEECCCCCCccccCHHHHHHHHHHHHhc
Confidence 99 8999999999999999999999999999964
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=246.79 Aligned_cols=243 Identities=16% Similarity=0.134 Sum_probs=165.1
Q ss_pred eeeEEEEeCC-C-CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-G-DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~g~-~-~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+++|...|+ + +|+|||+||++++...|..+++.| .||+|+++|+||||.|+.+. ....|+ ++++++|+.++++
T Consensus 33 ~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~-~~~~~~-~~~~a~dl~~ll~ 110 (297)
T 2xt0_A 33 LRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPT-DDAVYT-FGFHRRSLLAFLD 110 (297)
T ss_dssp CCEEEEEESCTTCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEES-CGGGCC-HHHHHHHHHHHHH
T ss_pred eEEEEEEccCCCCCCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCC-CcccCC-HHHHHHHHHHHHH
Confidence 4688999884 3 579999999999999999999999 57999999999999997531 113565 9999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh--h--hhhhhhcc
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN--Y--EAWAYGYA 157 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~ 157 (264)
.+++++++|+||||||.+|+.+|.++|++|+++|++++... .... . . ............. . ........
T Consensus 111 ~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~---~~~~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (297)
T 2xt0_A 111 ALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALA---VGLS-P--G-KGFESWRDFVANSPDLDVGKLMQRAI 183 (297)
T ss_dssp HHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCC---SSSC-S--C-HHHHHHHHHHHTCTTCCHHHHHHHHS
T ss_pred HhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCC---cccC-C--c-hhHHHHHHHhhcccccchhHHHhccC
Confidence 99999999999999999999999999999999999998531 1000 0 0 0111111100000 0 00000000
Q ss_pred cccCCCCChHHHHHHHHhhcccCch-hhhhhhhhhc----------CCccccccC-CcccCEEEEecCCCCCcchhhHHH
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPD-ISLFVSKTVF----------DTDLRGILG-LVRVPCVIIQTSKDVSVPVSVAEY 225 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~-~i~~P~l~i~g~~D~~~~~~~~~~ 225 (264)
..........+...+...... ....+..... ..+..+.+. ++++|+|+|+|++|.++| +..+.
T Consensus 184 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~ 258 (297)
T 2xt0_A 184 ----PGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEVMG 258 (297)
T ss_dssp ----TTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHHHH
T ss_pred ----ccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHHHH
Confidence 011111122221111100000 0000100000 012234566 899999999999999999 88899
Q ss_pred HHHHcCCCceEEE--ecCCCCcccccChhcHHHHHHHHhcC
Q 024681 226 LQRHLGGRNTVEL--LKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 226 ~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+.+.+++ +++.+ ++++||+++. +|+++++.|.+||++
T Consensus 259 ~~~~~p~-~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~~ 297 (297)
T 2xt0_A 259 MLRQAIR-GCPEPMIVEAGGHFVQE-HGEPIARAALAAFGQ 297 (297)
T ss_dssp HHHHHST-TCCCCEEETTCCSSGGG-GCHHHHHHHHHHTTC
T ss_pred HHHhCCC-CeeEEeccCCCCcCccc-CHHHHHHHHHHHHhC
Confidence 9999998 55543 7899999999 999999999999974
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=251.21 Aligned_cols=248 Identities=15% Similarity=0.126 Sum_probs=166.4
Q ss_pred eeeEEEEeCC-C-CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-G-DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~g~-~-~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+++|...|+ + +|+|||+||++++...|..+++.| .||+|+++|+||||.|+.+. ....|+ ++++++|+.++++
T Consensus 34 ~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~-~~~~y~-~~~~a~dl~~ll~ 111 (310)
T 1b6g_A 34 LRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV-DEEDYT-FEFHRNFLLALIE 111 (310)
T ss_dssp CEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEES-CGGGCC-HHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC-CcCCcC-HHHHHHHHHHHHH
Confidence 4689999884 3 579999999999999999999999 56999999999999997531 123565 9999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC-------CCCCCccHHHHHHHHHHHHhhhh--hh
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE-------DYHGGFEEAEIDKVFRAMEANYE--AW 152 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~--~~ 152 (264)
++++++++|+||||||.+|+.+|.++|++|+++|++++........ ................. ..... ..
T Consensus 112 ~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 190 (310)
T 1b6g_A 112 RLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVT-PSDLRLDQF 190 (310)
T ss_dssp HHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHS-CSSCCHHHH
T ss_pred HcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHHhcc-CchhhhhhH
Confidence 9999999999999999999999999999999999999853210100 00000000011100000 00000 00
Q ss_pred hhhcccccCCCCChHHHHHHHHhhcccC-chhhhhhhhhhc---------CCccccccC-CcccCEEEEecCCCCCcchh
Q 024681 153 AYGYAPLAVGADVPAAVREFSRTLFNMR-PDISLFVSKTVF---------DTDLRGILG-LVRVPCVIIQTSKDVSVPVS 221 (264)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~-~i~~P~l~i~g~~D~~~~~~ 221 (264)
.... ...........+...+.... ......+..... ..+....+. ++++|+|+|+|++|.++| +
T Consensus 191 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~ 265 (310)
T 1b6g_A 191 MKRW----APTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG-P 265 (310)
T ss_dssp HHHH----STTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS-H
T ss_pred Hhhc----CCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEeccCcchhh-h
Confidence 0000 00011111111111110000 000000000000 012234566 899999999999999999 8
Q ss_pred hHHHHHHHcCCCceEEEe--cCCCCcccccChhcHHHHHHHHhc
Q 024681 222 VAEYLQRHLGGRNTVELL--KIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
..+.+.+.+++ ++++++ +++||+++. +|++|++.|.+||+
T Consensus 266 ~~~~~~~~ip~-~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~ 307 (310)
T 1b6g_A 266 DVMYPMKALIN-GCPEPLEIADAGHFVQE-FGEQVAREALKHFA 307 (310)
T ss_dssp HHHHHHHHHST-TCCCCEEETTCCSCGGG-GHHHHHHHHHHHHH
T ss_pred HHHHHHHhccc-ccceeeecCCcccchhh-ChHHHHHHHHHHHh
Confidence 88999999998 787777 999999999 99999999999986
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=241.93 Aligned_cols=242 Identities=21% Similarity=0.350 Sum_probs=169.7
Q ss_pred eeEEEEeC-CCCceEEEecCCC---CChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHH----HHHHH
Q 024681 7 ALHVRVVG-TGDRILVLAHGFG---TDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAY----VDDLL 77 (264)
Q Consensus 7 ~~~~~~~g-~~~p~vv~~hG~~---~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~----~~~~~ 77 (264)
.++|...| +++|+|||+||++ ++...|..+++.| ++|+|+++|+||||.|+.+. ...++ ++++ ++|+.
T Consensus 18 ~l~y~~~g~~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~--~~~~~-~~~~~~~~~~dl~ 94 (285)
T 1c4x_A 18 ASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPE--TYPGH-IMSWVGMRVEQIL 94 (285)
T ss_dssp CEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCS--SCCSS-HHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCEEEEEeCCCCCCcchhhHHHHHHHHhhCcEEEEecCCCCCCCCCCC--Ccccc-hhhhhhhHHHHHH
Confidence 57898899 5655599999998 7778999999999 88999999999999997542 12454 8999 99999
Q ss_pred HHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH----hhhhhhh
Q 024681 78 NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME----ANYEAWA 153 (264)
Q Consensus 78 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 153 (264)
++++.++.++++|+||||||.+|+.+|.++|++|+++|++++....... . . ........... .......
T Consensus 95 ~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~----~-~~~~~~~~~~~~~~~~~~~~~~ 167 (285)
T 1c4x_A 95 GLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNA--R----P-PELARLLAFYADPRLTPYRELI 167 (285)
T ss_dssp HHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSS--C----C-HHHHHHHTGGGSCCHHHHHHHH
T ss_pred HHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCc--c----c-hhHHHHHHHhccccHHHHHHHH
Confidence 9999999999999999999999999999999999999999986432111 0 0 01111110000 0000111
Q ss_pred hhcccccCCCC----ChHHHHHHHHhhcccCchhhhhhhhhh------c--CCccccccCCcccCEEEEecCCCCCcchh
Q 024681 154 YGYAPLAVGAD----VPAAVREFSRTLFNMRPDISLFVSKTV------F--DTDLRGILGLVRVPCVIIQTSKDVSVPVS 221 (264)
Q Consensus 154 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 221 (264)
.. ...... ............ ..+.......... . ..+....+.++++|+++|+|++|.++|.+
T Consensus 168 ~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~ 242 (285)
T 1c4x_A 168 HS---FVYDPENFPGMEEIVKSRFEVA--NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLD 242 (285)
T ss_dssp HT---TSSCSTTCTTHHHHHHHHHHHH--HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTH
T ss_pred HH---hhcCcccccCcHHHHHHHHHhc--cCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCeeeCHH
Confidence 10 001110 111111111111 1111111111110 0 11133457889999999999999999999
Q ss_pred hHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 222 VAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
..+.+.+.+++ +++++++++||+++.|+|+++.+.|.+||++
T Consensus 243 ~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 243 TSLYLTKHLKH-AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp HHHHHHHHCSS-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCC-ceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 99999999998 8999999999999999999999999999964
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=240.82 Aligned_cols=251 Identities=19% Similarity=0.185 Sum_probs=168.5
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHH-hhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQR-ILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~-~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+++|...|+ +.|+|||+||++++...|.. +++.| .||+|+++|+||||.|+........|+ ++++++|+.++++
T Consensus 11 ~~l~y~~~G~~~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~-~~~~a~dl~~~l~ 89 (298)
T 1q0r_A 11 VELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYG-FGELAADAVAVLD 89 (298)
T ss_dssp EEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCC-HHHHHHHHHHHHH
T ss_pred eEEEEEeccCCCCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcC-HHHHHHHHHHHHH
Confidence 3688999885 45799999999999999987 55888 579999999999999975211123464 9999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCC-CC---------CC---CCCCccHHHHHHHHHHHH--
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL-ND---------ED---YHGGFEEAEIDKVFRAME-- 146 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~-~~---------~~---~~~~~~~~~~~~~~~~~~-- 146 (264)
.++.++++|+||||||.+|+.+|.++|++|+++|++++.+... .. .. .........+..+.....
T Consensus 90 ~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (298)
T 1q0r_A 90 GWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPA 169 (298)
T ss_dssp HTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCC
T ss_pred HhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccccHHHHHHHhccCccc
Confidence 9999999999999999999999999999999999999865110 00 00 000111111111111000
Q ss_pred hhhhhhhh-------hcccccCCCCChHHHHHHHHh-hccc-Cchhh-hhhhhhhcCCccccc-cCCcccCEEEEecCCC
Q 024681 147 ANYEAWAY-------GYAPLAVGADVPAAVREFSRT-LFNM-RPDIS-LFVSKTVFDTDLRGI-LGLVRVPCVIIQTSKD 215 (264)
Q Consensus 147 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~-~~~~~~~~~~~~~~~-~~~i~~P~l~i~g~~D 215 (264)
........ ....... .........+... +... ..... ..........+.... ++++++|+|+|+|++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D 248 (298)
T 1q0r_A 170 EGRAAEVAKRVSKWRILSGTGV-PFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHD 248 (298)
T ss_dssp CSHHHHHHHHHHHHHHHHCSSS-CCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGGCCSCEEEEEETTC
T ss_pred ccHHHHHHHHHHhhhhccCCCC-CCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCcccccccccccCCCEEEEEeCCC
Confidence 00000000 0000001 1112222222111 1111 11111 111111123345566 8889999999999999
Q ss_pred CCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 216 VSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.++|++..+.+++.+++ +++++++++|| +.|+++.+.|.+||+
T Consensus 249 ~~~~~~~~~~~~~~~p~-~~~~~i~~~gH----e~p~~~~~~i~~fl~ 291 (298)
T 1q0r_A 249 PIAPAPHGKHLAGLIPT-ARLAEIPGMGH----ALPSSVHGPLAEVIL 291 (298)
T ss_dssp SSSCTTHHHHHHHTSTT-EEEEEETTCCS----SCCGGGHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCC-CEEEEcCCCCC----CCcHHHHHHHHHHHH
Confidence 99999999999999999 89999999999 789999999999985
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=236.46 Aligned_cols=235 Identities=19% Similarity=0.326 Sum_probs=163.9
Q ss_pred eeEEEEeCCCCceEEEecCCCCC-hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTD-QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~-~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.++|...|+++|+||++||++++ ...|..+++.| .||+|+++|+||||.|+...... ....+.+.++|+.++++.+
T Consensus 13 ~l~~~~~g~~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~~~l~~l 91 (254)
T 2ocg_A 13 QLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDF-PADFFERDAKDAVDLMKAL 91 (254)
T ss_dssp EEEEEEEECCSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCC-CTTHHHHHHHHHHHHHHHT
T ss_pred EEEEEEecCCCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHh
Confidence 58898889877799999999988 67899999999 56999999999999997542111 1112678899999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc---cc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP---LA 160 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 160 (264)
+.++++++||||||.+|+.+|.++|++|+++|++++..... .... ...... .....+...... ..
T Consensus 92 ~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----------~~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 159 (254)
T 2ocg_A 92 KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVT----------DEDS-MIYEGI-RDVSKWSERTRKPLEAL 159 (254)
T ss_dssp TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCC----------HHHH-HHHHTT-SCGGGSCHHHHHHHHHH
T ss_pred CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccC----------hhhH-HHHHHH-HHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999853211 0000 000000 000000000000 00
Q ss_pred CCCC-ChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEe
Q 024681 161 VGAD-VPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELL 239 (264)
Q Consensus 161 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 239 (264)
.... .......+.... ...............+.++++|+|+++|++|.++|.+..+.+.+.+++ ++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~ 230 (254)
T 2ocg_A 160 YGYDYFARTCEKWVDGI--------RQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKG-SRLHLM 230 (254)
T ss_dssp HCHHHHHHHHHHHHHHH--------HGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT-CEEEEE
T ss_pred hcchhhHHHHHHHHHHH--------HHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCC-CEEEEc
Confidence 0000 000000000000 000000011123456778999999999999999999999999999998 899999
Q ss_pred cCCCCcccccChhcHHHHHHHHhc
Q 024681 240 KIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 240 ~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++||+++.++|+++.+.|.+||+
T Consensus 231 ~~~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 231 PEGKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp TTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred CCCCCchhhhCHHHHHHHHHHHhC
Confidence 999999999999999999999984
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=245.37 Aligned_cols=240 Identities=14% Similarity=0.102 Sum_probs=161.7
Q ss_pred eeeEEEEe--CCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVV--GTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~--g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|... |+++|+|||+||++++...|..+++.| ++|+|+++|+||||.|+.+ ...|+ ++++++|+.+++++
T Consensus 14 ~~l~y~~~~~G~~~p~vvllHG~~~~~~~w~~~~~~L~~~~rvia~DlrGhG~S~~~---~~~~~-~~~~a~dl~~ll~~ 89 (276)
T 2wj6_A 14 NKLSYIDNQRDTDGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSE---VPDFG-YQEQVKDALEILDQ 89 (276)
T ss_dssp EEEEEEECCCCCSSCEEEEECCTTCCGGGGHHHHHHHTTTSCEEEECCTTCSSSCCC---CCCCC-HHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCeEEEECCCCCcHHHHHHHHHHHhcCCEEEEeCCCCCCCCCCC---CCCCC-HHHHHHHHHHHHHH
Confidence 36889998 877689999999999999999999999 9999999999999999764 24565 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhC-CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh------hhhhhhhh
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA------NYEAWAYG 155 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 155 (264)
+++++++|+||||||.+|+.+|.++ |++|+++|++++...... ...... ...... ........
T Consensus 90 l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~ 159 (276)
T 2wj6_A 90 LGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPK---------PDFAKS-LTLLKDPERWREGTHGLFDV 159 (276)
T ss_dssp HTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCC---------HHHHHH-HHHHHCTTTHHHHHHHHHHH
T ss_pred hCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCC---------chHHHH-hhhccCcchHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999997431110 000000 000000 00000000
Q ss_pred cccccCCCCChHHHHHHHHhhcccCchhhhhhhhhh----c-CCccccccCCcccCEEEEecCCCCCcc--hhhHHHHHH
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTV----F-DTDLRGILGLVRVPCVIIQTSKDVSVP--VSVAEYLQR 228 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~ 228 (264)
+... .......+.+................... . ..+....+.++++|+++++|..|...+ ....+.+.+
T Consensus 160 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~ 236 (276)
T 2wj6_A 160 WLDG---HDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAE 236 (276)
T ss_dssp HHTT---BCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHH
T ss_pred hhcc---cchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHh
Confidence 0000 01111111111111111100000000000 0 011123466788999988864433222 345577888
Q ss_pred HcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 229 HLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 229 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+|+ +++++++++||+++.|+|++|++.|.+||+
T Consensus 237 ~~p~-a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~ 270 (276)
T 2wj6_A 237 QHPW-FSYAKLGGPTHFPAIDVPDRAAVHIREFAT 270 (276)
T ss_dssp HCTT-EEEEECCCSSSCHHHHSHHHHHHHHHHHHH
T ss_pred hCCC-eEEEEeCCCCCcccccCHHHHHHHHHHHHh
Confidence 8998 899999999999999999999999999986
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=244.43 Aligned_cols=243 Identities=17% Similarity=0.195 Sum_probs=165.1
Q ss_pred eeEEEEeCC--C---CceEEEecCCCCChhhHHHhhhhc-C--CceEEEecCCCCCCCCCCCCCC-cccchHHHHHHHHH
Q 024681 7 ALHVRVVGT--G---DRILVLAHGFGTDQSAWQRILPYL-N--HHRVIMFDLVCAGSVNPDYFDF-RRYTTLDAYVDDLL 77 (264)
Q Consensus 7 ~~~~~~~g~--~---~p~vv~~hG~~~~~~~~~~~~~~l-~--g~~v~~~d~~g~G~s~~~~~~~-~~~~~~~~~~~~~~ 77 (264)
+++|+..|+ + .++|||+||++++...|...+..| . +|+|+++|+||||.|+...... ..| +++.+++|+.
T Consensus 39 ~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~~-~~~~~a~dl~ 117 (330)
T 3nwo_A 39 ETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFW-TPQLFVDEFH 117 (330)
T ss_dssp EEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGGC-CHHHHHHHHH
T ss_pred EEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCccccc-cHHHHHHHHH
Confidence 678999887 2 238999999999999998888888 3 8999999999999997532222 334 4999999999
Q ss_pred HHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh----hh---
Q 024681 78 NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN----YE--- 150 (264)
Q Consensus 78 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--- 150 (264)
++++.+++++++|+||||||.+|+.+|.++|++|.++|+++++..... ............... ..
T Consensus 118 ~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 189 (330)
T 3nwo_A 118 AVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRL--------WSEAAGDLRAQLPAETRAALDRHE 189 (330)
T ss_dssp HHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHH--------HHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHH--------HHHHHHHHHHhcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998543100 000000000000000 00
Q ss_pred ---------------hhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhh--------hhhhcCCccccccCCcccCE
Q 024681 151 ---------------AWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFV--------SKTVFDTDLRGILGLVRVPC 207 (264)
Q Consensus 151 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~P~ 207 (264)
.+....... ...........+.. ... .+...... .......+..+.+.+|++|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 266 (330)
T 3nwo_A 190 AAGTITHPDYLQAAAEFYRRHVCR-VVPTPQDFADSVAQ-MEA-EPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPV 266 (330)
T ss_dssp HHTCTTSHHHHHHHHHHHHHHTCC-SSSCCHHHHHHHHH-HHH-SCHHHHHHTCSCSSSCCSGGGGCBCGGGGGGCCSCE
T ss_pred hccCCCCHHHHHHHHHHHHHhhcc-ccCCCHHHHHHHHh-hcc-chhhhhcccCchhhhhhccccCCchhhhcccCCCCe
Confidence 000000000 00000111111000 000 00000000 01112234456678899999
Q ss_pred EEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 208 VIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 208 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
|+|+|++|.++|. ..+.+.+.+++ +++++++++||+++.|+|++|++.|.+||+
T Consensus 267 Lvi~G~~D~~~p~-~~~~~~~~ip~-~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~ 320 (330)
T 3nwo_A 267 LVIAGEHDEATPK-TWQPFVDHIPD-VRSHVFPGTSHCTHLEKPEEFRAVVAQFLH 320 (330)
T ss_dssp EEEEETTCSSCHH-HHHHHHHHCSS-EEEEEETTCCTTHHHHSHHHHHHHHHHHHH
T ss_pred EEEeeCCCccChH-HHHHHHHhCCC-CcEEEeCCCCCchhhcCHHHHHHHHHHHHH
Confidence 9999999998864 67889999999 899999999999999999999999999996
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-38 Score=233.48 Aligned_cols=243 Identities=15% Similarity=0.233 Sum_probs=164.4
Q ss_pred eeEEEEeCCC--CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGTG--DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~~--~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+++|...|+. +|+|||+||++++...|..+++.| ++|+|+++|+||||.|+... +...|+ ++++++|+.++++.+
T Consensus 17 ~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~-~~~~a~dl~~~l~~l 94 (285)
T 3bwx_A 17 RLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAK-DPMTYQ-PMQYLQDLEALLAQE 94 (285)
T ss_dssp EEEEEEECBCTTSCCEEEECCTTCCGGGGHHHHHHHBBTBCEEEECCTTBTTSCCCS-SGGGCS-HHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCCCCcEEEECCCCcchhhHHHHHHHhhcCCEEEeecCCCCCCCCCCC-CccccC-HHHHHHHHHHHHHhc
Confidence 6889888873 579999999999999999999999 99999999999999997542 124565 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-----hh---hhhhhh
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-----NY---EAWAYG 155 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~ 155 (264)
+.++++|+||||||.+|+.+|.++|++|+++|++++.+... ............. .. ......
T Consensus 95 ~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (285)
T 3bwx_A 95 GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVS----------PEGLERIRGYVGQGRNFETWMHAARALQE 164 (285)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCC----------HHHHHHHHHHTTCCCEESSHHHHHHHHHH
T ss_pred CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccC----------cchhHHHHHHhcCCcccccHHHHHHHHHH
Confidence 99999999999999999999999999999999998643211 0001000000000 00 000000
Q ss_pred cccccCCCCChHHHHHHHHhhcccCchh------hhhhhhhh-------cCCccccccCCc-ccCEEEEecCCCCCcchh
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRPDI------SLFVSKTV-------FDTDLRGILGLV-RVPCVIIQTSKDVSVPVS 221 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-------~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~ 221 (264)
.....+...................+.. .......+ ...+....+.++ ++|+|+|+|++|.+++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~ 244 (285)
T 3bwx_A 165 SSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILSAQ 244 (285)
T ss_dssp HHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEEETTCSSSCHH
T ss_pred hhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEEeCCCCccCHH
Confidence 0000011111111111111111100000 00000000 011222223344 799999999999999999
Q ss_pred hHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 222 VAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
..+.+++. ++ +++++++++||+++.|+|+.+ +.|.+||++
T Consensus 245 ~~~~~~~~-~~-~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 245 TAAKMASR-PG-VELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp HHHHHHTS-TT-EEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred HHHHHHhC-CC-cEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 99999998 88 899999999999999999987 579999864
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-39 Score=235.55 Aligned_cols=242 Identities=14% Similarity=0.101 Sum_probs=172.0
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|...|+ ++|+|||+||++++...|..+++.| ++|+|+++|+||||.|+.. ...++ ++++++|+.++++.++
T Consensus 10 ~l~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~---~~~~~-~~~~~~~~~~~l~~l~ 85 (264)
T 3ibt_A 10 LMTYSESGDPHAPTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTD---SGDFD-SQTLAQDLLAFIDAKG 85 (264)
T ss_dssp ECCEEEESCSSSCEEEEECCTTCCGGGGTTHHHHHTTTSEEEEECCTTCSTTCCC---CSCCC-HHHHHHHHHHHHHHTT
T ss_pred EEEEEEeCCCCCCeEEEEcCCCCcHhHHHHHHHHHHhcCcEEEEccccCCCCCCC---ccccC-HHHHHHHHHHHHHhcC
Confidence 678888888 5689999999999999999999999 8899999999999999864 34454 9999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhC-CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh--hhhhhhhhccccc-
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA--NYEAWAYGYAPLA- 160 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~- 160 (264)
.++++++||||||.+++.+|.++ |++|+++|++++.. . .. ............ .............
T Consensus 86 ~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (264)
T 3ibt_A 86 IRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-Q-PH---------PGFWQQLAEGQHPTEYVAGRQSFFDEWA 154 (264)
T ss_dssp CCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-S-CC---------HHHHHHHHHTTCTTTHHHHHHHHHHHHH
T ss_pred CCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-C-cC---------hhhcchhhcccChhhHHHHHHHHHHHhc
Confidence 99999999999999999999999 99999999999865 1 10 011111110000 0000000000000
Q ss_pred CCCCChHHHHHHHHhhcccCchhhhhhhhhhcC-----CccccccCCcccCEEEEec--CCCCCcchhhHHHHHHHcCCC
Q 024681 161 VGADVPAAVREFSRTLFNMRPDISLFVSKTVFD-----TDLRGILGLVRVPCVIIQT--SKDVSVPVSVAEYLQRHLGGR 233 (264)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~P~l~i~g--~~D~~~~~~~~~~~~~~~~~~ 233 (264)
.........+.+...+................. .+....+.++++|+++++| +.|...+.+..+.+.+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~~~- 233 (264)
T 3ibt_A 155 ETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSW- 233 (264)
T ss_dssp TTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHCTT-
T ss_pred ccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHHHHHHHhCCC-
Confidence 111222333344443333332222222221111 1233567889999999965 44445556778889999998
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++.+.|.+||++
T Consensus 234 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (264)
T 3ibt_A 234 FHPRHIPGRTHFPSLENPVAVAQAIREFLQA 264 (264)
T ss_dssp EEEEECCCSSSCHHHHCHHHHHHHHHHHTC-
T ss_pred ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999974
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=237.88 Aligned_cols=240 Identities=19% Similarity=0.236 Sum_probs=167.5
Q ss_pred eeeEEEEeCCCCceEEEecCCC---CChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFG---TDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~---~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+++|...|++ |+|||+||++ ++...|..+++.| ++|+|+++|+||||.|+ +. ...|+ ++++++|+.++++
T Consensus 26 ~~l~y~~~g~g-~~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~-~~--~~~~~-~~~~~~dl~~~l~ 100 (296)
T 1j1i_A 26 VETRYLEAGKG-QPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTA-KP--DIEYT-QDRRIRHLHDFIK 100 (296)
T ss_dssp EEEEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSC-CC--SSCCC-HHHHHHHHHHHHH
T ss_pred EEEEEEecCCC-CeEEEECCCCCCcchHHHHHHHHHHHhhcCEEEEECCCCCCCCC-CC--CCCCC-HHHHHHHHHHHHH
Confidence 36788888875 6899999998 7778899999999 88999999999999998 32 23454 9999999999999
Q ss_pred HhCC-CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCC-----CccHHHHHHHHHHHHhhhhhhhhh
Q 024681 82 TLGV-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG-----GFEEAEIDKVFRAMEANYEAWAYG 155 (264)
Q Consensus 82 ~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
.++. ++++|+||||||.+|+.+|.++|++|+++|++++............ ......... ....
T Consensus 101 ~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 169 (296)
T 1j1i_A 101 AMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVH-----------LVKA 169 (296)
T ss_dssp HSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHH-----------HHHH
T ss_pred hcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHHH-----------HHHH
Confidence 9998 8999999999999999999999999999999998643211100000 000000000 0000
Q ss_pred cccccCCCCChHHHHHHHHhhcc-cCchhhhhhhhhh----cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 156 YAPLAVGADVPAAVREFSRTLFN-MRPDISLFVSKTV----FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
+.... ................. ............. ...+....+.++++|+|+|+|++|.++|.+..+.+.+.+
T Consensus 170 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~ 248 (296)
T 1j1i_A 170 LTNDG-FKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI 248 (296)
T ss_dssp HSCTT-CCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred hccCc-ccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHC
Confidence 00000 00011111111111100 0000111111100 011233457889999999999999999999999999999
Q ss_pred CCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 231 GGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 231 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
++ +++++++++||+++.|+|+++.+.|.+||+
T Consensus 249 ~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 280 (296)
T 1j1i_A 249 DD-SWGYIIPHCGHWAMIEHPEDFANATLSFLS 280 (296)
T ss_dssp TT-EEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred CC-CEEEEECCCCCCchhcCHHHHHHHHHHHHh
Confidence 98 899999999999999999999999999985
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=233.77 Aligned_cols=250 Identities=18% Similarity=0.241 Sum_probs=174.1
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
+++|...|++ |+||++||++++...|..+++.| ++|+|+++|+||||.|+... ....++ ++++++|+.++++.++.
T Consensus 14 ~~~y~~~g~~-~~vv~~HG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~s~~~~-~~~~~~-~~~~~~~~~~~~~~l~~ 90 (278)
T 3oos_A 14 KFEYFLKGEG-PPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAK-NDSEYS-MTETIKDLEAIREALYI 90 (278)
T ss_dssp EEEEEEECSS-SEEEECCSSEECCTTCCTTTGGGGGTSEEEEECCTTSTTSCCCS-SGGGGS-HHHHHHHHHHHHHHTTC
T ss_pred eEEEEecCCC-CeEEEEcCCCcchHHHHHHHHHhhcCceEEEEcCCCCCCCCCCC-CcccCc-HHHHHHHHHHHHHHhCC
Confidence 6789888865 69999999999999999999999 99999999999999997642 123454 99999999999999999
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC--CCCCCCC---CCccHHHHHHHHHHHHhhh------hhhhh
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF--LNDEDYH---GGFEEAEIDKVFRAMEANY------EAWAY 154 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~~ 154 (264)
++++++|||+||.+++.+|.++|++|+++|++++.... ....... ..............+.... .....
T Consensus 91 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (278)
T 3oos_A 91 NKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSR 170 (278)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHH
T ss_pred CeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccccCchHHHHHHH
Confidence 99999999999999999999999999999999997551 1111111 1111112222221111000 00000
Q ss_pred hcccccCCCCChHHHHHHHHhhccc-Cc-hhhhhhh-hhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 155 GYAPLAVGADVPAAVREFSRTLFNM-RP-DISLFVS-KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
..... .....+....+....... .. .....+. ......+....+.++++|+++++|++|.++|.+..+.+.+.++
T Consensus 171 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 248 (278)
T 3oos_A 171 EWALM--SFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIP 248 (278)
T ss_dssp HHHHH--HCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHST
T ss_pred HHhhc--ccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCC
Confidence 00000 000011111111100000 00 1111111 1223445566778899999999999999999999999999999
Q ss_pred CCceEEEecCCCCcccccChhcHHHHHHHHh
Q 024681 232 GRNTVELLKIEGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 262 (264)
+ +++++++++||+++.++|+++.+.|.+||
T Consensus 249 ~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 249 N-ATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp T-EEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred C-cEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 8 89999999999999999999999999986
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=235.31 Aligned_cols=248 Identities=13% Similarity=0.167 Sum_probs=165.4
Q ss_pred eeEEEEeCCCC-ceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~-p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
.++|...|++. |+|||+||++++...|..+++.| +.|+|+++|+||||.|+.. ....|+ ++++++|+.++++.++
T Consensus 32 ~l~y~~~G~g~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~GhG~S~~~--~~~~~~-~~~~a~dl~~ll~~l~ 108 (318)
T 2psd_A 32 FINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKS--GNGSYR-LLDHYKYLTAWFELLN 108 (318)
T ss_dssp EEEEEECCSCTTSEEEEECCTTCCGGGGTTTGGGTTTTSEEEEECCTTSTTCCCC--TTSCCS-HHHHHHHHHHHHTTSC
T ss_pred EEEEEEcCCCCCCeEEEECCCCCcHHHHHHHHHHhhhcCeEEEEeCCCCCCCCCC--CCCccC-HHHHHHHHHHHHHhcC
Confidence 57888888753 59999999999999999999999 8899999999999999764 223465 9999999999999999
Q ss_pred C-CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCC-CCCCCCCCccHHHHHHHHHH----HHhhhhhhhhhccc
Q 024681 85 V-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL-NDEDYHGGFEEAEIDKVFRA----MEANYEAWAYGYAP 158 (264)
Q Consensus 85 ~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 158 (264)
. ++++|+||||||.+|+.+|.++|++|+++|++++..... ....+.... ..+..+... .......+...+.+
T Consensus 109 ~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (318)
T 2psd_A 109 LPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIE--EDIALIKSEEGEKMVLENNFFVETVLP 186 (318)
T ss_dssp CCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCH--HHHHHHHSTHHHHHHTTTCHHHHTHHH
T ss_pred CCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHH--HHHHHHhcccchhhhhcchHHHHhhcc
Confidence 9 899999999999999999999999999999998642211 111111110 111111000 00000000110000
Q ss_pred cc-CCCCChHHHHHHHHhhcccCc--hhhhhhhhhhc------------CCccccccCCc-ccCEEEEecCCCCCcchhh
Q 024681 159 LA-VGADVPAAVREFSRTLFNMRP--DISLFVSKTVF------------DTDLRGILGLV-RVPCVIIQTSKDVSVPVSV 222 (264)
Q Consensus 159 ~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~ 222 (264)
.. ......+....+...+..... .....+..... ..+....+.++ ++|+|+|+|++| ++++ .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~~-~ 264 (318)
T 2psd_A 187 SKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPG-FFSN-A 264 (318)
T ss_dssp HTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEEEC-SSHH-H
T ss_pred ccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeEEEEeccc-cCcH-H
Confidence 00 111112222222222211100 00000000000 01122345667 999999999999 8888 8
Q ss_pred HHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 223 AEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+.+.+.+++ .+++++ ++||+++.|+|+++++.|.+||+
T Consensus 265 ~~~~~~~~~~-~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~ 303 (318)
T 2psd_A 265 IVEGAKKFPN-TEFVKV-KGLHFLQEDAPDEMGKYIKSFVE 303 (318)
T ss_dssp HHHHHTTSSS-EEEEEE-EESSSGGGTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-cEEEEe-cCCCCCHhhCHHHHHHHHHHHHH
Confidence 8889999998 788888 68999999999999999999985
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=236.46 Aligned_cols=251 Identities=15% Similarity=0.146 Sum_probs=168.9
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
..++|...|++ |+|||+||++++...|..+++.| +.|+|+++|+||||.|... ...++ ++++++|+.++++.++
T Consensus 20 ~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~---~~~~~-~~~~~~~l~~~l~~l~ 94 (301)
T 3kda_A 20 VKLHYVKGGQG-PLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPP---KTGYS-GEQVAVYLHKLARQFS 94 (301)
T ss_dssp EEEEEEEEESS-SEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTCCCC---SSCSS-HHHHHHHHHHHHHHHC
T ss_pred eEEEEEEcCCC-CEEEEECCCCcchhHHHHHHHHHHhcCeEEEEcCCCCCCCCCC---CCCcc-HHHHHHHHHHHHHHcC
Confidence 36788888854 79999999999999999999999 6699999999999999765 34454 9999999999999999
Q ss_pred CCe-EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCC--------CCCccHHHH---HHHHHHHHh-hhhh
Q 024681 85 VNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDY--------HGGFEEAEI---DKVFRAMEA-NYEA 151 (264)
Q Consensus 85 ~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~-~~~~ 151 (264)
.++ ++++||||||.+++.+|.++|++|+++|+++++......... ......... ......+.. ....
T Consensus 95 ~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (301)
T 3kda_A 95 PDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERF 174 (301)
T ss_dssp SSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTTHHHHHHTTCHHH
T ss_pred CCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCcchHHHHhccchHH
Confidence 888 999999999999999999999999999999986432111100 000000000 000011100 0000
Q ss_pred hhhhcccccCC---CCChHHHHHHHHhhcccC-chhhhhhhhhh-----cCCccccccCCcccCEEEEecCCCCCcchhh
Q 024681 152 WAYGYAPLAVG---ADVPAAVREFSRTLFNMR-PDISLFVSKTV-----FDTDLRGILGLVRVPCVIIQTSKDVSVPVSV 222 (264)
Q Consensus 152 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 222 (264)
+...+...... .........+........ .......+... ........+.++++|+++++|++| ++...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~~ 252 (301)
T 3kda_A 175 FLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGAGG--MGTFQ 252 (301)
T ss_dssp HHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCEEEEEECSTTS--CTTHH
T ss_pred HHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccccCcceEEEecCCC--CChhH
Confidence 11111111100 111222233322222111 00111111111 011122334488999999999999 67788
Q ss_pred HHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 223 AEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+.+.+.+++ +++++++++||+++.|+|+++++.|.+|+++
T Consensus 253 ~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 293 (301)
T 3kda_A 253 LEQMKAYAED-VEGHVLPGCGHWLPEECAAPMNRLVIDFLSR 293 (301)
T ss_dssp HHHHHTTBSS-EEEEEETTCCSCHHHHTHHHHHHHHHHHHTT
T ss_pred HHHHHhhccc-CeEEEcCCCCcCchhhCHHHHHHHHHHHHhh
Confidence 8889999998 8999999999999999999999999999974
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=229.59 Aligned_cols=233 Identities=19% Similarity=0.181 Sum_probs=154.7
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeEEEEe
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRCAYVG 92 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G 92 (264)
++|+|||+||++++...|..+++.| +||+|+++|+||||.|+... ...| +++++++|+.+++++++ .++++|+|
T Consensus 9 ~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~--~~~~-~~~~~a~dl~~~l~~l~~~~~~~lvG 85 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRL--DEIH-TFRDYSEPLMEVMASIPPDEKVVLLG 85 (264)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG--GGCC-SHHHHHHHHHHHHHHSCTTCCEEEEE
T ss_pred CCCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCCc--cccc-CHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 4579999999999999999999999 68999999999999996531 1234 49999999999999996 58999999
Q ss_pred cChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC--------CCC
Q 024681 93 HSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV--------GAD 164 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 164 (264)
|||||.+++.+|.++|++|+++|++++........ .......+...... ..+......... ...
T Consensus 86 hSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 2wfl_A 86 HSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHS------LTYPFEKYNEKCPA--DMMLDSQFSTYGNPENPGMSMIL 157 (264)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSC------TTHHHHHHHHHSCT--TTTTTCEEEEESCTTSCEEEEEC
T ss_pred eChHHHHHHHHHHhChhhhceeEEEeeccCCCCcc------hhhHHHHhhhcCcc--hhhhhhhhhhccCCCCCcchhhh
Confidence 99999999999999999999999999742111100 00111111110000 000000000000 000
Q ss_pred ChHHHH------------HHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC
Q 024681 165 VPAAVR------------EFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232 (264)
Q Consensus 165 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 232 (264)
...... ................ ... ..... .....++|+++|+|++|.++|.+..+.+.+.+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~-~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~ 233 (264)
T 2wfl_A 158 GPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQD-LAK--AKKFS-TERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGA 233 (264)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHH-HTT--SCCCC-TTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHCC
T ss_pred hHHHHHHHHhcCCCHHHHHHHHhccCCCcccccc-ccc--ccccC-hHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCCC
Confidence 000000 0000000000000000 000 00110 0011368999999999999999999999999998
Q ss_pred CceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 233 RNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++++.|.+|+++
T Consensus 234 -~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~ 264 (264)
T 2wfl_A 234 -DKVKEIKEADHMGMLSQPREVCKCLLDISDS 264 (264)
T ss_dssp -SEEEEETTCCSCHHHHSHHHHHHHHHHHHC-
T ss_pred -ceEEEeCCCCCchhhcCHHHHHHHHHHHhhC
Confidence 8999999999999999999999999999864
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=231.63 Aligned_cols=252 Identities=14% Similarity=0.173 Sum_probs=160.8
Q ss_pred eeEEEEeCCC--CceEEEecCCCCChhh-HHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGTG--DRILVLAHGFGTDQSA-WQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 7 ~~~~~~~g~~--~p~vv~~hG~~~~~~~-~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
+++|...|++ +|+|||+||++++... |..+...+ .||+|+++|+||||.|+... ...|+ ++++++|+.++++.
T Consensus 16 ~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~-~~~~~~dl~~~~~~ 92 (293)
T 1mtz_A 16 YIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPD--QSKFT-IDYGVEEAEALRSK 92 (293)
T ss_dssp EEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCC--GGGCS-HHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCC--CCccc-HHHHHHHHHHHHHH
Confidence 5788888875 2799999997665544 45554445 78999999999999997642 22354 99999999999999
Q ss_pred h-CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCC----CCCccHHHHHHHHHHHHh------hhhh
Q 024681 83 L-GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDY----HGGFEEAEIDKVFRAMEA------NYEA 151 (264)
Q Consensus 83 ~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~------~~~~ 151 (264)
+ +.++++|+||||||.+|+.+|.++|++|+++|++++.+........ ...........+...... ....
T Consensus 93 l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (293)
T 1mtz_A 93 LFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQE 172 (293)
T ss_dssp HHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred hcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHHHhhccCCcChHHHHH
Confidence 9 9999999999999999999999999999999999986431000000 000000000000000000 0000
Q ss_pred hhhhcccccC--CCCChHHHHHHHHhhcc-------cCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh
Q 024681 152 WAYGYAPLAV--GADVPAAVREFSRTLFN-------MRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV 222 (264)
Q Consensus 152 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 222 (264)
....+..... ....+............ ..+... .........+....+.++++|+|+|+|++| .+++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~i~~P~lii~G~~D-~~~~~~ 250 (293)
T 1mtz_A 173 AVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEF-TITGTIKDWDITDKISAIKIPTLITVGEYD-EVTPNV 250 (293)
T ss_dssp HHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTT-BCCSTTTTCBCTTTGGGCCSCEEEEEETTC-SSCHHH
T ss_pred HHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCccee-cccccccCCChhhhhccCCCCEEEEeeCCC-CCCHHH
Confidence 0000000000 00111111111000000 000000 000111123445567788999999999999 667788
Q ss_pred HHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 223 AEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+.+.+.+++ +++++++++||+++.|+|+++.+.|.+||++
T Consensus 251 ~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 291 (293)
T 1mtz_A 251 ARVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKLLSDFILK 291 (293)
T ss_dssp HHHHHHHSTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCC-ceEEEeCCCCCCccccCHHHHHHHHHHHHHh
Confidence 8999999998 8999999999999999999999999999964
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=223.02 Aligned_cols=243 Identities=16% Similarity=0.158 Sum_probs=169.7
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
..++|...|++ |+||++||++++...|..+++.| +||+|+++|+||||.|+.. ..++ ++++++|+.++++.++
T Consensus 13 ~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~----~~~~-~~~~~~~~~~~~~~l~ 86 (262)
T 3r0v_A 13 TPIAFERSGSG-PPVVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDSGDT----PPYA-VEREIEDLAAIIDAAG 86 (262)
T ss_dssp CEEEEEEEECS-SEEEEECCTTCCGGGGHHHHHHHTTTSEEEEECCTTSTTCCCC----SSCC-HHHHHHHHHHHHHHTT
T ss_pred cEEEEEEcCCC-CcEEEECCCCcChHHHHHHHHHHhcCcEEEEEecCCCcCCCCC----CCCC-HHHHHHHHHHHHHhcC
Confidence 36788888875 68999999999999999999999 9999999999999999865 2454 9999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhhhhhhhcccccCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYEAWAYGYAPLAVGA 163 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 163 (264)
++++++|||+||.+++.+|.++| +|+++|++++.............. ....+...... ........+.... ..
T Consensus 87 -~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 160 (262)
T 3r0v_A 87 -GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPD---YQTRLDALLAEGRRGDAVTYFMTEG-VG 160 (262)
T ss_dssp -SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTT---HHHHHHHHHHTTCHHHHHHHHHHHT-SC
T ss_pred -CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhH---HHHHHHHHhhccchhhHHHHHhhcc-cC
Confidence 99999999999999999999999 999999999865443222111111 11111111111 1111111111111 11
Q ss_pred CChHHHHHHHHhhc-----ccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEE
Q 024681 164 DVPAAVREFSRTLF-----NMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238 (264)
Q Consensus 164 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 238 (264)
......+.+..... .................+....+.++++|+++++|++|.++|.+..+.+.+.+++ +++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~ 239 (262)
T 3r0v_A 161 VPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIPN-ARYVT 239 (262)
T ss_dssp CCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHHHSTT-EEEEE
T ss_pred CCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHHhCCC-CeEEE
Confidence 11222222221110 0000000000001112233466788999999999999999999999999999998 89999
Q ss_pred ecCCCCcccccChhcHHHHHHHHhcC
Q 024681 239 LKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 239 ~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++++|| +++|+++.+.|.+||++
T Consensus 240 ~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 240 LENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp CCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred ecCCCc---ccCHHHHHHHHHHHHhC
Confidence 999999 47899999999999975
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=234.09 Aligned_cols=251 Identities=18% Similarity=0.243 Sum_probs=174.0
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhh-c-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPY-L-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~-l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|...|++ |+|||+||++++...|..+++. + +||+|+++|+||||.|+... ..++ ++++++|+.++++.+
T Consensus 19 ~~l~~~~~g~~-~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~---~~~~-~~~~~~~~~~~~~~~ 93 (309)
T 3u1t_A 19 ATIAYVDEGSG-QPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPD---IEYR-LQDHVAYMDGFIDAL 93 (309)
T ss_dssp EEEEEEEEECS-SEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCS---SCCC-HHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCC-CEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCC---cccC-HHHHHHHHHHHHHHc
Confidence 35788888875 6999999999999999999999 5 99999999999999998642 3454 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh---------hhhhhh
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN---------YEAWAY 154 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 154 (264)
+.++++|+|||+||.+++.+|.++|++|+++|++++.............. ..........+... ...+..
T Consensus 94 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (309)
T 3u1t_A 94 GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAM-GPQLGPLFRDLRTADVGEKMVLDGNFFVE 172 (309)
T ss_dssp TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGG-HHHHHHHHHHHTSTTHHHHHHTTTCHHHH
T ss_pred CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCcccccccccc-chhhhHHHHHHhccchhhhhccccceehh
Confidence 99999999999999999999999999999999999865432111111111 11112222111110 000111
Q ss_pred hcccc--cCCCCChHHHHHHHHhhcccCc-hhhhhhhhhhc-----------CCccccccCCcccCEEEEecCCCCCcch
Q 024681 155 GYAPL--AVGADVPAAVREFSRTLFNMRP-DISLFVSKTVF-----------DTDLRGILGLVRVPCVIIQTSKDVSVPV 220 (264)
Q Consensus 155 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 220 (264)
.+... ............+......... ........... ..+....+.++++|+++|+|++|.++|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~ 252 (309)
T 3u1t_A 173 TILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPK 252 (309)
T ss_dssp THHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCH
T ss_pred hhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhcccCCCCEEEEecCCCCCCCH
Confidence 11111 1111112222222222111110 00011111000 0123344677899999999999999999
Q ss_pred hhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 221 SVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+..+.+.+.+++ .++++++++||+++.++|+++.+.|.+||+
T Consensus 253 ~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 294 (309)
T 3u1t_A 253 PVVDYLSENVPN-LEVRFVGAGTHFLQEDHPHLIGQGIADWLR 294 (309)
T ss_dssp HHHHHHHHHSTT-EEEEEEEEESSCHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCC-CEEEEecCCcccchhhCHHHHHHHHHHHHH
Confidence 999999999998 788888999999999999999999999996
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=230.14 Aligned_cols=248 Identities=15% Similarity=0.164 Sum_probs=165.9
Q ss_pred eeeEEEEeCC---CCceEEEecCCCCChhh-HHH-----hhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 6 EALHVRVVGT---GDRILVLAHGFGTDQSA-WQR-----ILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 6 ~~~~~~~~g~---~~p~vv~~hG~~~~~~~-~~~-----~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
.+++|...|+ ++|+|||+||++++... |.. +++.| ++|+|+++|+||||.|.........+.+++++++|
T Consensus 21 ~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 100 (286)
T 2qmq_A 21 GSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADM 100 (286)
T ss_dssp EEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCCCCCHHHHHHT
T ss_pred eEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCCccCHHHHHHH
Confidence 4788999997 46899999999999874 665 77888 88999999999999886432111122249999999
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhhhhhh
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYEAWAY 154 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 154 (264)
+.++++.++.++++++||||||.+++.+|.++|++|+++|++++.+... .... ........... .......
T Consensus 101 l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~ 172 (286)
T 2qmq_A 101 IPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAK-------GWMD-WAAHKLTGLTSSIPDMILG 172 (286)
T ss_dssp HHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCC-------CHHH-HHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCccc-------chhh-hhhhhhccccccchHHHHH
Confidence 9999999999999999999999999999999999999999999864321 0110 01100000000 0000000
Q ss_pred h-cccccCCCCChHHHHHHHHhhccc-Cchhhhhhhhhh---cCCc-cccccCCcccCEEEEecCCCCCcchhhHHHHHH
Q 024681 155 G-YAPLAVGADVPAAVREFSRTLFNM-RPDISLFVSKTV---FDTD-LRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR 228 (264)
Q Consensus 155 ~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~-~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 228 (264)
. +..... .......+.+....... .......+...+ ...+ ....+.++++|+++|+|++|.++| ...+.+.+
T Consensus 173 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~~~ 250 (286)
T 2qmq_A 173 HLFSQEEL-SGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-AVVECNSK 250 (286)
T ss_dssp HHSCHHHH-HTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-HHHHHHHH
T ss_pred HHhcCCCC-CcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-HHHHHHHH
Confidence 0 000000 00111222222222211 111111111111 1111 134567889999999999999998 45666666
Q ss_pred HcC-CCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 229 HLG-GRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 229 ~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
..+ + +++++++++||+++.++|+++.+.|.+||++
T Consensus 251 ~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 286 (286)
T 2qmq_A 251 LDPTQ-TSFLKMADSGGQPQLTQPGKLTEAFKYFLQG 286 (286)
T ss_dssp SCGGG-EEEEEETTCTTCHHHHCHHHHHHHHHHHHCC
T ss_pred hcCCC-ceEEEeCCCCCcccccChHHHHHHHHHHhcC
Confidence 666 6 8999999999999999999999999999974
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=235.08 Aligned_cols=242 Identities=18% Similarity=0.222 Sum_probs=173.7
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHH-Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQ-RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~-~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|...|++ |+||++||++++...|. .+...| +||+|+++|+||+|.|... ..+ +++++++|+.++++.
T Consensus 33 ~~l~y~~~g~~-~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~----~~~-~~~~~~~~~~~~l~~ 106 (293)
T 3hss_A 33 INLAYDDNGTG-DPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENA----EGF-TTQTMVADTAALIET 106 (293)
T ss_dssp EEEEEEEECSS-EEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTC----CSC-CHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCC-CEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCc----ccC-CHHHHHHHHHHHHHh
Confidence 36889988855 78999999999999998 677776 9999999999999999754 345 499999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh----------hhhhh
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA----------NYEAW 152 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 152 (264)
++.++++++|||+||.+++.+|.++|++++++|++++...... .............. .....
T Consensus 107 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (293)
T 3hss_A 107 LDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDR--------ARQFFNKAEAELYDSGVQLPPTYDARARL 178 (293)
T ss_dssp HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCH--------HHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred cCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCCh--------hhhHHHHHHHHHHhhcccchhhHHHHHHH
Confidence 9999999999999999999999999999999999998643211 00001100000000 00000
Q ss_pred hhhcccccCCCCChHHHHHHHHhhc---ccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHH
Q 024681 153 AYGYAPLAVGADVPAAVREFSRTLF---NMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRH 229 (264)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 229 (264)
...+....... ......+..... .................+....+.++++|+++++|++|.++|.+..+.+.+.
T Consensus 179 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~ 256 (293)
T 3hss_A 179 LENFSRKTLND--DVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADA 256 (293)
T ss_dssp HHHSCHHHHTC--HHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred hhhcccccccc--cccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHH
Confidence 00010000000 111111111111 1111222222233334555667888999999999999999999999999999
Q ss_pred cCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 230 LGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 230 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++ +++++++++||+++.++|+++.+.|.+||++
T Consensus 257 ~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 290 (293)
T 3hss_A 257 LPN-GRYLQIPDAGHLGFFERPEAVNTAMLKFFAS 290 (293)
T ss_dssp STT-EEEEEETTCCTTHHHHSHHHHHHHHHHHHHT
T ss_pred CCC-ceEEEeCCCcchHhhhCHHHHHHHHHHHHHh
Confidence 998 8999999999999999999999999999974
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=232.22 Aligned_cols=252 Identities=19% Similarity=0.231 Sum_probs=174.6
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|...|+ ++|+|||+||++++...|..+++.| ++|+|+++|+||||.|+... ..+ +++++++|+.++++.+
T Consensus 20 ~~l~~~~~g~~~~~~vl~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~---~~~-~~~~~~~~~~~~~~~~ 95 (299)
T 3g9x_A 20 ERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPD---LDY-FFDDHVRYLDAFIEAL 95 (299)
T ss_dssp EEEEEEEESCSSSCCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCC---CCC-CHHHHHHHHHHHHHHT
T ss_pred eEEEEEecCCCCCCEEEEECCCCccHHHHHHHHHHHccCCEEEeeCCCCCCCCCCCC---Ccc-cHHHHHHHHHHHHHHh
Confidence 3678888887 3579999999999999999999999 99999999999999997652 245 4999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHH-----HHHHhhhhhhhhhccc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVF-----RAMEANYEAWAYGYAP 158 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 158 (264)
+.++++++|||+||.+++.+|.++|++|+++|++++.........+.... ......+. .........+...+..
T Consensus 96 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
T 3g9x_A 96 GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFA-RETFQAFRTADVGRELIIDQNAFIEGALP 174 (299)
T ss_dssp TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGG-HHHHHHHTSSSHHHHHHTTSCHHHHTHHH
T ss_pred CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHH-HHHHHHHcCCCcchhhhccchhhHHHhhh
Confidence 99999999999999999999999999999999999654432221111111 11111000 0000000011111111
Q ss_pred cc-CCCCChHHHHHHHHhhcccCc-hhhhhhhhhhc-----------CCccccccCCcccCEEEEecCCCCCcchhhHHH
Q 024681 159 LA-VGADVPAAVREFSRTLFNMRP-DISLFVSKTVF-----------DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEY 225 (264)
Q Consensus 159 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 225 (264)
.. ...........+......... ........... ..+....+.++++|+++++|++|.++|.+..+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~ 254 (299)
T 3g9x_A 175 KCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAAR 254 (299)
T ss_dssp HTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHH
T ss_pred hhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEEEecCCCCCCCHHHHHH
Confidence 11 111122223333222221111 01111111110 012334467789999999999999999999999
Q ss_pred HHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 226 LQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 226 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+.+.+++ +++++++++||+++.++|+++++.|.+++.
T Consensus 255 ~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~ 291 (299)
T 3g9x_A 255 LAESLPN-CKTVDIGPGLHYLQEDNPDLIGSEIARWLP 291 (299)
T ss_dssp HHHHSTT-EEEEEEEEESSCHHHHCHHHHHHHHHHHSG
T ss_pred HHhhCCC-CeEEEeCCCCCcchhcCHHHHHHHHHHHHh
Confidence 9999999 899999999999999999999999999875
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=234.10 Aligned_cols=251 Identities=15% Similarity=0.167 Sum_probs=164.2
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCC-CCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDY-FDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
..++|...|++ |+|||+||++++...|..+++.| .||+|+++|+||||.|+.+. .....|+ ++++++|+.++++.
T Consensus 21 ~~l~y~~~G~g-~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~-~~~~a~dl~~~l~~ 98 (328)
T 2cjp_A 21 LNMHLAELGEG-PTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFS-ILHLVGDVVALLEA 98 (328)
T ss_dssp EEEEEEEECSS-SEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGS-HHHHHHHHHHHHHH
T ss_pred cEEEEEEcCCC-CEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCccccc-HHHHHHHHHHHHHH
Confidence 36888888865 79999999999999999999999 58999999999999997541 1234565 99999999999999
Q ss_pred hC--CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC-CCCCCCccHHHHHHH------H---------H-
Q 024681 83 LG--VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND-EDYHGGFEEAEIDKV------F---------R- 143 (264)
Q Consensus 83 ~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~------~---------~- 143 (264)
++ .++++|+||||||.+|+.+|.++|++|+++|+++++...... .. ........ . .
T Consensus 99 l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (328)
T 2cjp_A 99 IAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMN-----VVEGLKAIYGEDHYISRFQVPGEIEA 173 (328)
T ss_dssp HCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCC-----HHHHHHHHHCTTBHHHHTSSTTHHHH
T ss_pred hcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCC-----hHHHHHhhcccchHHHhhhCCCcHHH
Confidence 99 999999999999999999999999999999999875321100 00 00000000 0 0
Q ss_pred HHHh-hhhhhhhhccc-------------ccCCC---------C-ChHHHHHHHHhhcccCchhhhhhhhhhc-CCcc--
Q 024681 144 AMEA-NYEAWAYGYAP-------------LAVGA---------D-VPAAVREFSRTLFNMRPDISLFVSKTVF-DTDL-- 196 (264)
Q Consensus 144 ~~~~-~~~~~~~~~~~-------------~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 196 (264)
.+.. ....+...+.. ..... . .......+...+...........+.... ....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (328)
T 2cjp_A 174 EFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPINWELTA 253 (328)
T ss_dssp HHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTG
T ss_pred HhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHHHhcccchhhhh
Confidence 0000 00001100000 00000 0 0111111111111000000000000000 0000
Q ss_pred ccccCCcccCEEEEecCCCCCcchhh------HHHHHHHcCCCc-eEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 197 RGILGLVRVPCVIIQTSKDVSVPVSV------AEYLQRHLGGRN-TVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 197 ~~~~~~i~~P~l~i~g~~D~~~~~~~------~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
...+.++++|+++|+|++|.++|.+. .+.+.+.+++ + ++++++++||+++.|+|+++++.|.+||++
T Consensus 254 ~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 254 PWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPL-LEEVVVLEGAAHFVSQERPHEISKHIYDFIQK 327 (328)
T ss_dssp GGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTT-BCCCEEETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred hccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcC-CeeEEEcCCCCCCcchhCHHHHHHHHHHHHHh
Confidence 01357889999999999999998642 2567788888 7 899999999999999999999999999964
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=234.06 Aligned_cols=251 Identities=15% Similarity=0.165 Sum_probs=167.3
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (264)
.++|...|+++|+||++||++++...|..++..| ||+|+++|+||+|.|+... ...++ ++++++|+.++++.++.+
T Consensus 71 ~~~~~~~g~~~~~vv~~hG~~~~~~~~~~~~~~l-g~~Vi~~D~~G~G~S~~~~--~~~~~-~~~~a~dl~~~l~~l~~~ 146 (330)
T 3p2m_A 71 AISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGL-GEPALAVDLPGHGHSAWRE--DGNYS-PQLNSETLAPVLRELAPG 146 (330)
T ss_dssp TEEEEEESSSCCSEEEECCTTCCGGGGHHHHHHS-CCCEEEECCTTSTTSCCCS--SCBCC-HHHHHHHHHHHHHHSSTT
T ss_pred eEEEEEeCCCCCeEEEECCCCCccchHHHHHHHc-CCeEEEEcCCCCCCCCCCC--CCCCC-HHHHHHHHHHHHHHhCCC
Confidence 4788889988889999999999999999998888 9999999999999998532 24554 999999999999999999
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH--hhhhhhhhhcccccCCCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME--ANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 164 (264)
+++|+||||||.+|+.+|.++|++|+++|++++.+.............. .......... .............. ...
T Consensus 147 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 224 (330)
T 3p2m_A 147 AEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQR-GTVALMHGEREFPSFQAMLDLTIAAA-PHR 224 (330)
T ss_dssp CCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC------------CCBSCHHHHHHHHHHHC-TTS
T ss_pred CcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhh-hhhhhhcCCccccCHHHHHHHHHhcC-CCC
Confidence 9999999999999999999999999999999985321000000000000 0000000000 00000000000000 000
Q ss_pred ChH-HHHHHHHhhcccCchhhhhhhhhhcC----CccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCce-EEE
Q 024681 165 VPA-AVREFSRTLFNMRPDISLFVSKTVFD----TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT-VEL 238 (264)
Q Consensus 165 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~ 238 (264)
... ....+..................+.. .+....+.++++|+++++|++|.++|.+..+.+.+.+++ .+ +++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~~-~~~~~~ 303 (330)
T 3p2m_A 225 DVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATH-FRGVHI 303 (330)
T ss_dssp CHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCSS-EEEEEE
T ss_pred CHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeeEEE
Confidence 011 11111111111000000000000000 011234667899999999999999999999999999999 78 999
Q ss_pred ecCCCCcccccChhcHHHHHHHHhcC
Q 024681 239 LKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 239 ~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++++||+++.++|+++.+.|.+||++
T Consensus 304 i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 304 VEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp ETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred eCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 99999999999999999999999974
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=227.02 Aligned_cols=233 Identities=17% Similarity=0.147 Sum_probs=167.7
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-C--CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-N--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT- 82 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~- 82 (264)
+++|...|++ |+||++||++++...|..++..| + ||+|+++|+||||.|+.... + +++++++|+.++++.
T Consensus 12 ~l~y~~~g~~-~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~----~-~~~~~~~~~~~~l~~~ 85 (272)
T 3fsg_A 12 NISYFSIGSG-TPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP----S-TSDNVLETLIEAIEEI 85 (272)
T ss_dssp CCEEEEECCS-SEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS----C-SHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCC-CeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCC----C-CHHHHHHHHHHHHHHH
Confidence 5788888865 68999999999999999999999 6 99999999999999986522 4 599999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC------------CCCCCCccHHHHHHHHHHHHhhhh
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND------------EDYHGGFEEAEIDKVFRAMEANYE 150 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
++.++++++|||+||.+|+.+|.++|++|+++|++++....... ..............+.....
T Consensus 86 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 161 (272)
T 3fsg_A 86 IGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNV---- 161 (272)
T ss_dssp HTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCS----
T ss_pred hCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhc----
Confidence 78899999999999999999999999999999999986432111 01111111111111100000
Q ss_pred hhhhhcccccCCCCChHHHHHHHH----hhcccCchhhhhhhhhhcCCcc--ccccCCcccCEEEEecCCCCCcchhhHH
Q 024681 151 AWAYGYAPLAVGADVPAAVREFSR----TLFNMRPDISLFVSKTVFDTDL--RGILGLVRVPCVIIQTSKDVSVPVSVAE 224 (264)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 224 (264)
. ........+.. .............. .....+. ...+.++++|+++++|++|.++|++..+
T Consensus 162 -----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 228 (272)
T 3fsg_A 162 -----------I-INNQAWHDYQNLIIPGLQKEDKTFIDQLQ-NNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQL 228 (272)
T ss_dssp -----------E-ESHHHHHHHHHHTHHHHHHCCHHHHHHHT-TSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHH
T ss_pred -----------c-CCCchhHHHHHHhhhhhhhccHHHHHHHh-hhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHH
Confidence 0 00011111111 11111111111111 1111121 2245788999999999999999999999
Q ss_pred HHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 225 YLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+.+.+++ +++++++++||+++.++|+++.+.|.+||+
T Consensus 229 ~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 266 (272)
T 3fsg_A 229 KLINHNEN-GEIVLLNRTGHNLMIDQREAVGFHFDLFLD 266 (272)
T ss_dssp HHHTTCTT-EEEEEESSCCSSHHHHTHHHHHHHHHHHHH
T ss_pred HHHHhcCC-CeEEEecCCCCCchhcCHHHHHHHHHHHHH
Confidence 99999998 899999999999999999999999999986
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=229.00 Aligned_cols=232 Identities=18% Similarity=0.179 Sum_probs=154.8
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeEEEEe
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRCAYVG 92 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G 92 (264)
++|+|||+||++++...|..+++.| .||+|+++|+||||.|+... ...| +++++++|+.++++.++ .++++|+|
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~--~~~~-~~~~~a~dl~~~l~~l~~~~~~~lvG 79 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKI--EELR-TLYDYTLPLMELMESLSADEKVILVG 79 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCG--GGCC-SHHHHHHHHHHHHHTSCSSSCEEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccCc--cccc-CHHHHHHHHHHHHHHhccCCCEEEEe
Confidence 3479999999999999999999999 68999999999999997531 1234 49999999999999997 58999999
Q ss_pred cChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC---C-----CC
Q 024681 93 HSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV---G-----AD 164 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~ 164 (264)
|||||.+++.+|.++|++|+++|++++........ .......+...... ..+......... . ..
T Consensus 80 hSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T 1xkl_A 80 HSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHN------SSFVLEQYNERTPA--ENWLDTQFLPYGSPEEPLTSMFF 151 (273)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSC------TTHHHHHHHHTSCT--TTTTTCEEEECSCTTSCCEEEEC
T ss_pred cCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCc------HHHHHHHhhccCCh--hhHHHHHHhhccCCCCCcccccc
Confidence 99999999999999999999999999742111100 00001111110000 001000000000 0 00
Q ss_pred ChHHHH------------HHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC
Q 024681 165 VPAAVR------------EFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232 (264)
Q Consensus 165 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 232 (264)
...... ................. .. ..... .....++|+++|+|++|.++|++..+.+.+.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~-~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~ 227 (273)
T 1xkl_A 152 GPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDL-SK--AKYFT-DERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV 227 (273)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHH-HH--CCCCC-TTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC
T ss_pred CHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhh-hc--ccccc-hhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCCC
Confidence 000000 00000000000000000 00 00110 0112478999999999999999999999999998
Q ss_pred CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 233 RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++++++||+++.|+|+++++.|.+|++
T Consensus 228 -~~~~~i~~aGH~~~~e~P~~~~~~i~~fl~ 257 (273)
T 1xkl_A 228 -TEAIEIKGADHMAMLCEPQKLCASLLEIAH 257 (273)
T ss_dssp -SEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred -CeEEEeCCCCCCchhcCHHHHHHHHHHHHH
Confidence 899999999999999999999999999985
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=235.66 Aligned_cols=222 Identities=16% Similarity=0.204 Sum_probs=153.9
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh--CCCeEEEEec
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL--GVNRCAYVGH 93 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~ 93 (264)
+.|||+||++++...|..+++.| +||+|+++|+||||.|... ...+ +++++++|+.++++.+ +.++++|+||
T Consensus 52 ~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~---~~~~-~~~~~~~d~~~~~~~l~~~~~~v~lvG~ 127 (281)
T 4fbl_A 52 IGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAE---MAAS-TASDWTADIVAAMRWLEERCDVLFMTGL 127 (281)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHH---HHTC-CHHHHHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCcc---ccCC-CHHHHHHHHHHHHHHHHhCCCeEEEEEE
Confidence 56999999999999999999999 8999999999999999532 2233 4889999999999987 5689999999
Q ss_pred ChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHH
Q 024681 94 SVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFS 173 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
||||.+++.+|.++|++|+++|++++...... ...... ........................
T Consensus 128 S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------ 189 (281)
T 4fbl_A 128 SMGGALTVWAAGQFPERFAGIMPINAALRMES----------PDLAAL--AFNPDAPAELPGIGSDIKAEGVKE------ 189 (281)
T ss_dssp THHHHHHHHHHHHSTTTCSEEEEESCCSCCCC----------HHHHHH--HTCTTCCSEEECCCCCCSSTTCCC------
T ss_pred CcchHHHHHHHHhCchhhhhhhcccchhcccc----------hhhHHH--HHhHhhHHhhhcchhhhhhHHHHH------
Confidence 99999999999999999999999998643211 000000 000000000000000000000000
Q ss_pred HhhcccCc-hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCCCcccccC-
Q 024681 174 RTLFNMRP-DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGHLPHLSA- 250 (264)
Q Consensus 174 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~- 250 (264)
......+ .....+... .......++++++|+|+|+|++|.++|++.++.+++.+++. +++++++++||.++.+.
T Consensus 190 -~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~ 266 (281)
T 4fbl_A 190 -LAYPVTPVPAIKHLITI--GAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDND 266 (281)
T ss_dssp -CCCSEEEGGGHHHHHHH--HHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTT
T ss_pred -hhhccCchHHHHHHHHh--hhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccC
Confidence 0000000 000000000 01123456788999999999999999999999999999753 68999999999988874
Q ss_pred hhcHHHHHHHHhcC
Q 024681 251 PAIVGPVIRRALSR 264 (264)
Q Consensus 251 ~~~~~~~i~~fl~~ 264 (264)
++++.+.|.+||++
T Consensus 267 ~e~v~~~i~~FL~~ 280 (281)
T 4fbl_A 267 KELILERSLAFIRK 280 (281)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999999975
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=226.80 Aligned_cols=228 Identities=14% Similarity=0.140 Sum_probs=154.4
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeEEEEec
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRCAYVGH 93 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~ 93 (264)
+++|||+||++.+...|..+++.| .||+|+++|+||||.|+... ...| +++++++|+.++++.++ .++++|+||
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~--~~~~-~~~~~a~dl~~~l~~l~~~~~~~lvGh 79 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQI--EEIG-SFDEYSEPLLTFLEALPPGEKVILVGE 79 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG--GGCC-SHHHHTHHHHHHHHTSCTTCCEEEEEE
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc--cccc-CHHHHHHHHHHHHHhccccCCeEEEEE
Confidence 468999999999999999999999 68999999999999997531 1235 49999999999999995 589999999
Q ss_pred ChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc---------------
Q 024681 94 SVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP--------------- 158 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 158 (264)
||||.+++.+|.++|++|+++|++++........ ............ ..+......
T Consensus 80 SmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T 3c6x_A 80 SCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHC------PSYVVDKLMEVF----PDWKDTTYFTYTKDGKEITGLKLG 149 (257)
T ss_dssp ETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSC------TTHHHHHHHHHS----CCCTTCEEEEEEETTEEEEEEECC
T ss_pred CcchHHHHHHHHhCchhhheEEEEecccCCCCCc------chhHHHHHhhcC----cchhhhhhhhccCCCCcccccccc
Confidence 9999999999999999999999999853211100 000111111100 001000000
Q ss_pred ------ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC
Q 024681 159 ------LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232 (264)
Q Consensus 159 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 232 (264)
........... ................ ... .... ......++|+++|+|++|.++|++.++.+++.+++
T Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~--~~~~-~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~~ 224 (257)
T 3c6x_A 150 FTLLRENLYTLCGPEEY-ELAKMLTRKGSLFQNI-LAK--RPFF-TKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP 224 (257)
T ss_dssp HHHHHHHTSTTSCHHHH-HHHHHHCCCBCCCHHH-HHH--SCCC-CTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC
T ss_pred HHHHHHHHhcCCCHHHH-HHHHHhcCCCccchhh-hcc--cccc-ChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCCC
Confidence 00000000000 0110110000000000 000 0011 00111368999999999999999999999999998
Q ss_pred CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 233 RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++++++||+++.|+|+++++.|.+|++
T Consensus 225 -~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~ 254 (257)
T 3c6x_A 225 -DKVYKVEGGDHKLQLTKTKEIAEILQEVAD 254 (257)
T ss_dssp -SEEEECCSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred -CeEEEeCCCCCCcccCCHHHHHHHHHHHHH
Confidence 899999999999999999999999999986
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=233.18 Aligned_cols=254 Identities=19% Similarity=0.246 Sum_probs=164.3
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCC--CcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFD--FRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+++|...|++ |+|||+||++++...|..+++.| +||+|+++|+||||.|+..... ...++ ++++++|+.++++.+
T Consensus 24 ~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~-~~~~~~~~~~~l~~l 101 (306)
T 3r40_A 24 RIFARVGGDG-PPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYT-KRAMAKQLIEAMEQL 101 (306)
T ss_dssp CEEEEEEECS-SEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTSCCCCCCTTCGGGS-HHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCC-CeEEEECCCCCCHHHHHHHHHHhccCCeEEEeCCCCCCCCCCCCCCcccCCCC-HHHHHHHHHHHHHHh
Confidence 5788888855 79999999999999999999999 9999999999999999765221 11454 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHH--------HHHH-HHhhhhhhhh
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDK--------VFRA-MEANYEAWAY 154 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~ 154 (264)
+.++++|+||||||.+|+.+|.++|++|+++|++++.+................... .... .......+..
T Consensus 102 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (306)
T 3r40_A 102 GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVK 181 (306)
T ss_dssp TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHH
T ss_pred CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHH
Confidence 999999999999999999999999999999999998543110000000000000000 0000 0000001111
Q ss_pred hccccc-----CCCCChHHHHHHHHhhccc-CchhhhhhhhhhcCCccc------cccCCcccCEEEEecCCCCCcc-hh
Q 024681 155 GYAPLA-----VGADVPAAVREFSRTLFNM-RPDISLFVSKTVFDTDLR------GILGLVRVPCVIIQTSKDVSVP-VS 221 (264)
Q Consensus 155 ~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~i~~P~l~i~g~~D~~~~-~~ 221 (264)
.+.... .........+.+...+... ........+......+.. ..+.++++|+++|+|++|.+++ ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~ 261 (306)
T 3r40_A 182 AKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAAT 261 (306)
T ss_dssp HHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC------
T ss_pred HHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCCCcceEEEEecCCcccCchh
Confidence 111100 1111222333333322210 001111111111111111 1468899999999999999998 66
Q ss_pred hHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 222 VAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
..+.+.+..++ ++++++ ++||+++.++|+++.+.|.+||++
T Consensus 262 ~~~~~~~~~~~-~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 302 (306)
T 3r40_A 262 PLDVWRKWASD-VQGAPI-ESGHFLPEEAPDQTAEALVRFFSA 302 (306)
T ss_dssp CHHHHHHHBSS-EEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC
T ss_pred HHHHHHhhcCC-CeEEEe-cCCcCchhhChHHHHHHHHHHHHh
Confidence 67777777887 888888 689999999999999999999974
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=236.17 Aligned_cols=251 Identities=22% Similarity=0.227 Sum_probs=180.7
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
..++|...|++ |+|||+||++++...|..+++.| .||+|+++|+||||.|+... ..+ +++++++|+.++++.+
T Consensus 14 ~~l~y~~~G~g-p~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~---~~~-s~~~~a~dl~~~l~~l 88 (456)
T 3vdx_A 14 IDLYYEDHGTG-VPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT---TGY-DYDTFAADLNTVLETL 88 (456)
T ss_dssp EEEEEEEESSS-EEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCS---SCC-SHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCC-CEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCC---CCC-CHHHHHHHHHHHHHHh
Confidence 36788888865 79999999999999999999999 89999999999999997642 345 4999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhC-CCccceeEEecCCCCCCCCCC-C-CCCccHHHHHHHHHHHHhhhhhhhhh----c
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFLNDED-Y-HGGFEEAEIDKVFRAMEANYEAWAYG----Y 156 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 156 (264)
+.++++++||||||.+++.+|.++ |++++++|++++......... . ...........+..........+... +
T Consensus 89 ~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (456)
T 3vdx_A 89 DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDF 168 (456)
T ss_dssp TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhhccchHHHHHHHHHH
Confidence 999999999999999999888877 899999999998754422211 1 11212233333332222221111111 1
Q ss_pred ccc---cCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh-hHHHHHHHcCC
Q 024681 157 APL---AVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYLQRHLGG 232 (264)
Q Consensus 157 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~ 232 (264)
... ................................ ..+....+.++++|+|+++|++|.++|.+ ..+.+.+.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~~~ 247 (456)
T 3vdx_A 169 YNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPS 247 (456)
T ss_dssp TTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGT-TCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHCTT
T ss_pred hcccccccccccHHHHHHHhhhccccchhhhhhhhhhh-hhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHCCC
Confidence 111 11111122333333333322222222222222 45566778899999999999999999988 78888888888
Q ss_pred CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 233 RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++++++||+++.++|+++.+.|.+||+
T Consensus 248 -~~~~~i~gagH~~~~e~p~~v~~~I~~FL~ 277 (456)
T 3vdx_A 248 -AEYVEVEGAPHGLLWTHAEEVNTALLAFLA 277 (456)
T ss_dssp -SEEEEETTCCSCTTTTTHHHHHHHHHHHHH
T ss_pred -ceEEEeCCCCCcchhhCHHHHHHHHHHHHH
Confidence 899999999999999999999999999986
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=227.19 Aligned_cols=254 Identities=16% Similarity=0.197 Sum_probs=171.2
Q ss_pred eeEEEEeC---CCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVG---TGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g---~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.++|...+ ..+|+||++||++++...|..+++.| +||+|+++|+||+|.|.... ...+ +++++++++.++++
T Consensus 33 ~~~~~~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~~~-~~~~~~~~~~~~~~ 109 (315)
T 4f0j_A 33 SMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPA--HYQY-SFQQLAANTHALLE 109 (315)
T ss_dssp EEEEEEECCSSCCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SCCC-CHHHHHHHHHHHHH
T ss_pred eEEEeecCCCCCCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCC--cccc-CHHHHHHHHHHHHH
Confidence 35555553 24589999999999999999999999 68999999999999997642 2244 49999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC-CCCCccHHHHHHHHHHHHhhhhhhhh-hcccc
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED-YHGGFEEAEIDKVFRAMEANYEAWAY-GYAPL 159 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 159 (264)
.++.++++++|||+||.+++.+|.++|++|+++|++++......... .......................... .+...
T Consensus 110 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (315)
T 4f0j_A 110 RLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAG 189 (315)
T ss_dssp HTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTT
T ss_pred HhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999998532211000 00000000000000000000111110 11111
Q ss_pred cCCCCChHHHHHHHHhhcccCchhhh----hhhhhhcCCccccccCCcccCEEEEecCCCCCcc----------------
Q 024681 160 AVGADVPAAVREFSRTLFNMRPDISL----FVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVP---------------- 219 (264)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~---------------- 219 (264)
.......................... .........+....+.++++|+++++|++|.++|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~ 269 (315)
T 4f0j_A 190 EWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNY 269 (315)
T ss_dssp CCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCH
T ss_pred ccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCccccccccccccccccc
Confidence 11111111111111111111111100 0111222344556778899999999999999999
Q ss_pred hhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 220 VSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+..+.+.+.+++ +++++++++||+++.++|+++.+.|.+||++
T Consensus 270 ~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 270 AQLGKDAARRIPQ-ATLVEFPDLGHTPQIQAPERFHQALLEGLQT 313 (315)
T ss_dssp HHHHHHHHHHSTT-EEEEEETTCCSCHHHHSHHHHHHHHHHHHCC
T ss_pred hhhhhHHHhhcCC-ceEEEeCCCCcchhhhCHHHHHHHHHHHhcc
Confidence 7888999999998 8999999999999999999999999999974
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-37 Score=228.92 Aligned_cols=252 Identities=16% Similarity=0.225 Sum_probs=173.1
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCC-CcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFD-FRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|...|++ |+||++||++++...|..+++.| ++|+|+++|+||||.|+..... ...++ ++++++|+.++++.+
T Consensus 18 ~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~-~~~~~~~~~~~l~~~ 95 (297)
T 2qvb_A 18 KRMAYIDEGKG-DAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYS-YGEQRDFLFALWDAL 95 (297)
T ss_dssp EEEEEEEESSS-SEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSC-HHHHHHHHHHHHHHT
T ss_pred EEEEEEecCCC-CeEEEECCCCchHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCCccccCcC-HHHHHHHHHHHHHHc
Confidence 36888888875 79999999999999999999999 8899999999999999764221 12254 999999999999999
Q ss_pred CC-CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHH----HHhhhhhhhhhccc
Q 024681 84 GV-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRA----MEANYEAWAYGYAP 158 (264)
Q Consensus 84 ~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 158 (264)
+. ++++++||||||.+++.+|.++|++|+++|++++............. ....+..+... .......+...+..
T Consensus 96 ~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (297)
T 2qvb_A 96 DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPA-VRGVFQGFRSPQGEPMALEHNIFVERVLP 174 (297)
T ss_dssp TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGG-GHHHHHHHTSTTHHHHHHTTCHHHHTHHH
T ss_pred CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChH-HHHHHHHHhcccchhhhccccHHHHHHHh
Confidence 99 99999999999999999999999999999999986542211111100 01111110000 00000011111111
Q ss_pred -ccCCCCChHHHHHHHHhhccc--Cchhhhhhhhhh-----------cCCccccccCCcccCEEEEecCCCCCcchhhHH
Q 024681 159 -LAVGADVPAAVREFSRTLFNM--RPDISLFVSKTV-----------FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAE 224 (264)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 224 (264)
........+....+....... .......+.... ...+....+.++++|+++++|++|.++|.+..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 254 (297)
T 2qvb_A 175 GAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIITGRIRD 254 (297)
T ss_dssp HTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHH
T ss_pred ccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEEEEecCCCCcCCHHHHH
Confidence 011112222333333332221 111111222211 111334456678999999999999999999999
Q ss_pred HHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 225 YLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+.+.+++ +++++ ++||+++.++|+++.+.|.+||+
T Consensus 255 ~~~~~~~~--~~~~~-~~gH~~~~~~p~~~~~~i~~fl~ 290 (297)
T 2qvb_A 255 YVRSWPNQ--TEITV-PGVHFVQEDSPEEIGAAIAQFVR 290 (297)
T ss_dssp HHHTSSSE--EEEEE-EESSCGGGTCHHHHHHHHHHHHH
T ss_pred HHHHHcCC--eEEEe-cCccchhhhCHHHHHHHHHHHHH
Confidence 99999887 88888 89999999999999999999986
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=220.47 Aligned_cols=221 Identities=14% Similarity=0.177 Sum_probs=150.4
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHH---HHHHHHhCCCeEEEE
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDL---LNILDTLGVNRCAYV 91 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ 91 (264)
+|+|||+||++++...|..+++.| +||+|+++|+||||.|... ...++ ++++++|+ .++++.++.++++|+
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~---~~~~~-~~~~~~d~~~~~~~l~~~~~~~~~lv 91 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEE---LVHTG-PDDWWQDVMNGYEFLKNKGYEKIAVA 91 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHH---HTTCC-HHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHH---hcCCC-HHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 478999999999999999999999 6899999999999976421 12233 66666665 456677788999999
Q ss_pred ecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 92 GHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
||||||.+|+.+|.++| |+++|+++++.... ............. ..+.... .........
T Consensus 92 G~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~---------~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~ 151 (247)
T 1tqh_A 92 GLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIK---------SEETMYEGVLEYA---REYKKRE------GKSEEQIEQ 151 (247)
T ss_dssp EETHHHHHHHHHHTTSC--CSCEEEESCCSSCC---------CHHHHHHHHHHHH---HHHHHHH------TCCHHHHHH
T ss_pred EeCHHHHHHHHHHHhCC--CCeEEEEcceeecC---------cchhhhHHHHHHH---HHhhccc------ccchHHHHh
Confidence 99999999999999998 99999887642210 0111100000000 0000000 011111111
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCCCcccccC
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGHLPHLSA 250 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~ 250 (264)
.................. . ..+..+.+.++++|+|+|+|++|.++|++.++.+++.+++. +++++++++||+++.|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 229 (247)
T 1tqh_A 152 EMEKFKQTPMKTLKALQE-L-IADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQ 229 (247)
T ss_dssp HHHHHTTSCCTTHHHHHH-H-HHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGST
T ss_pred hhhcccCCCHHHHHHHHH-H-HHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCc
Confidence 112111111111111111 1 12344567789999999999999999999999999999863 68999999999999875
Q ss_pred -hhcHHHHHHHHhc
Q 024681 251 -PAIVGPVIRRALS 263 (264)
Q Consensus 251 -~~~~~~~i~~fl~ 263 (264)
|+++.+.|.+||+
T Consensus 230 ~~~~~~~~i~~Fl~ 243 (247)
T 1tqh_A 230 EKDQLHEDIYAFLE 243 (247)
T ss_dssp THHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 7999999999986
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=228.28 Aligned_cols=241 Identities=19% Similarity=0.235 Sum_probs=171.1
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
.++|...|+ +|+||++||++++...|..+++.| ++|+|+++|+||+|.|... ...+ +++++++|+.++++.++.
T Consensus 59 ~~~~~~~g~-~p~vv~lhG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~---~~~~-~~~~~~~dl~~~l~~l~~ 133 (314)
T 3kxp_A 59 TLNVREKGS-GPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKP---ETGY-EANDYADDIAGLIRTLAR 133 (314)
T ss_dssp EEEEEEECC-SSEEEEECCTTCCGGGGHHHHHTTTTTSEEEEECCTTSTTSCCC---SSCC-SHHHHHHHHHHHHHHHTS
T ss_pred EEEEEecCC-CCEEEEECCCCCCHHHHHHHHHHHHcCCeEEEEeCCCcCCCCCC---CCCC-CHHHHHHHHHHHHHHhCC
Confidence 477888887 579999999999999999999999 8899999999999999743 2344 499999999999999999
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh------hhhhhhhcccc
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN------YEAWAYGYAPL 159 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 159 (264)
++++++|||+||.+++.+|.++|++++++|++++.+.... ............. .......+. .
T Consensus 134 ~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 202 (314)
T 3kxp_A 134 GHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIET----------EALDALEARVNAGSQLFEDIKAVEAYLA-G 202 (314)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCH----------HHHHHHHHHTTTTCSCBSSHHHHHHHHH-H
T ss_pred CCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCc----------chhhHHHHHhhhchhhhcCHHHHHHHHH-h
Confidence 9999999999999999999999999999999998643211 1111110000000 000000000 0
Q ss_pred cCCCCChHHHHHHHHhhccc--------CchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 160 AVGADVPAAVREFSRTLFNM--------RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
.................... ...............+....+.++++|+|+++|++|.++|.+..+.+.+.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~ 282 (314)
T 3kxp_A 203 RYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRP 282 (314)
T ss_dssp HSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHCT
T ss_pred hcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHHHHHHHHHhCC
Confidence 00111111111111111110 0000111111111224555667889999999999999999999999999999
Q ss_pred CCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 232 GRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+ +++++++++||+++.++|+++.+.|.+||++
T Consensus 283 ~-~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 283 D-LPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp T-SCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred C-ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 8 8999999999999999999999999999975
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=223.68 Aligned_cols=228 Identities=16% Similarity=0.110 Sum_probs=159.1
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecC
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHS 94 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S 94 (264)
|+|||+||++++...|..+++.| +||+|+++|+||||.|+.+. ...+ +++++++|+.++++.++. ++++|+|||
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~-~~~~~~~~l~~~l~~l~~~~~~~lvGhS 81 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPI--QAVE-TVDEYSKPLIETLKSLPENEEVILVGFS 81 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCG--GGCC-SHHHHHHHHHHHHHTSCTTCCEEEEEET
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCC--Cccc-cHHHhHHHHHHHHHHhcccCceEEEEeC
Confidence 79999999999999999999999 68999999999999997641 1234 499999999999999988 899999999
Q ss_pred hhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc----------------
Q 024681 95 VSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP---------------- 158 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 158 (264)
|||.+++.+|.++|++|+++|++++........ ... ...........+......
T Consensus 82 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (258)
T 3dqz_A 82 FGGINIALAADIFPAKIKVLVFLNAFLPDTTHV------PSH----VLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGP 151 (258)
T ss_dssp THHHHHHHHHTTCGGGEEEEEEESCCCCCSSSC------TTH----HHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCH
T ss_pred hhHHHHHHHHHhChHhhcEEEEecCCCCCCCCc------chH----HHHHhcccchhhhhcccchhhhhccChhhhhhhH
Confidence 999999999999999999999999854322111 000 111111111111111000
Q ss_pred -----ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC
Q 024681 159 -----LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233 (264)
Q Consensus 159 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 233 (264)
................... .... +.......+........++|+++|+|++|.++|++..+.+.+.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 225 (258)
T 3dqz_A 152 KFMKARLYQNCPIEDYELAKMLHR-QGSF----FTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNV- 225 (258)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCC-CEEC----CHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCC-
T ss_pred HHHHHHhhccCCHHHHHHHHHhcc-CCch----hhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCCc-
Confidence 0000111111111111111 0000 0000101111122223478999999999999999999999999999
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.++|+++.+.|.+|+++
T Consensus 226 ~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 256 (258)
T 3dqz_A 226 SKVYEIDGGDHMVMLSKPQKLFDSLSAIATD 256 (258)
T ss_dssp SCEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred ccEEEcCCCCCchhhcChHHHHHHHHHHHHH
Confidence 7999999999999999999999999999863
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=226.63 Aligned_cols=252 Identities=15% Similarity=0.199 Sum_probs=173.5
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCC-CcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFD-FRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|...|++ |+||++||++++...|..+++.| ++|+|+++|+||||.|+..... ...++ ++++++|+.++++.+
T Consensus 19 ~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~-~~~~~~~~~~~l~~l 96 (302)
T 1mj5_A 19 RRMAYIDEGTG-DPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYA-YAEHRDYLDALWEAL 96 (302)
T ss_dssp EEEEEEEESCS-SEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSC-HHHHHHHHHHHHHHT
T ss_pred EEEEEEEcCCC-CEEEEECCCCCchhhhHHHHHHhccCCeEEEEcCCCCCCCCCCCCCCccccc-HHHHHHHHHHHHHHh
Confidence 35788888874 79999999999999999999999 8899999999999999764221 12254 999999999999999
Q ss_pred CC-CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHH----HHhhhhhhhhhccc
Q 024681 84 GV-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRA----MEANYEAWAYGYAP 158 (264)
Q Consensus 84 ~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 158 (264)
+. ++++++|||+||.+++.+|.++|++|+++|++++............ .....+..+... .......+...+..
T Consensus 97 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (302)
T 1mj5_A 97 DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPE-QDRDLFQAFRSQAGEELVLQDNVFVEQVLP 175 (302)
T ss_dssp TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCG-GGHHHHHHHHSTTHHHHHTTTCHHHHTHHH
T ss_pred CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhH-HHHHHHHHHhccchhhhhcChHHHHHHHHH
Confidence 99 9999999999999999999999999999999998654221111111 011111111000 00000011111111
Q ss_pred c-cCCCCChHHHHHHHHhhccc--Cchhhhhhhhhh-----------cCCccccccCCcccCEEEEecCCCCCcchhhHH
Q 024681 159 L-AVGADVPAAVREFSRTLFNM--RPDISLFVSKTV-----------FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAE 224 (264)
Q Consensus 159 ~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 224 (264)
. .......+....+...+... ............ ...+....+.++++|+++|+|++|.++|++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~ 255 (302)
T 1mj5_A 176 GLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRD 255 (302)
T ss_dssp HTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSHHHHH
T ss_pred hcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCCeEEEEeCCCCCCChHHHH
Confidence 0 11112222333333322211 111111111111 111334567889999999999999999999999
Q ss_pred HHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 225 YLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+.+.+++ +++++ ++||+++.++|+++.+.|.+|++
T Consensus 256 ~~~~~~~~--~~~~~-~~gH~~~~e~p~~~~~~i~~fl~ 291 (302)
T 1mj5_A 256 FCRTWPNQ--TEITV-AGAHFIQEDSPDEIGAAIAAFVR 291 (302)
T ss_dssp HHTTCSSE--EEEEE-EESSCGGGTCHHHHHHHHHHHHH
T ss_pred HHHHhcCC--ceEEe-cCcCcccccCHHHHHHHHHHHHH
Confidence 99998886 88888 89999999999999999999986
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=222.04 Aligned_cols=237 Identities=12% Similarity=0.143 Sum_probs=159.1
Q ss_pred CCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-CCCeEEE
Q 024681 14 GTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-GVNRCAY 90 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 90 (264)
.+++|+|||+||++++...|..+++.| +||+|+++|+||||.|+... ...+ +++++++|+.++++.+ +.++++|
T Consensus 9 ~~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~--~~~~-~~~~~~~~~~~~l~~l~~~~~~~l 85 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQA--LQIP-NFSDYLSPLMEFMASLPANEKIIL 85 (267)
T ss_dssp -CCCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCG--GGCC-SHHHHHHHHHHHHHTSCTTSCEEE
T ss_pred CCCCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCcC--CccC-CHHHHHHHHHHHHHhcCCCCCEEE
Confidence 345689999999999999999999999 68999999999999997651 1224 4999999999999999 4899999
Q ss_pred EecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc---ccCCCC-Ch
Q 024681 91 VGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP---LAVGAD-VP 166 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~ 166 (264)
+||||||.+++.+|.++|++|+++|++++....... .. .............+...... ...... ..
T Consensus 86 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (267)
T 3sty_A 86 VGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNI-------DA---TTVCTKAGSAVLGQLDNCVTYENGPTNPPTTL 155 (267)
T ss_dssp EEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTB-------CH---HHHHHHHHHTTTTCTTCEEECTTCTTSCCCEE
T ss_pred EEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcc-------hH---HHHHHHhcccchhhhhhhhhhhhhhhcccchh
Confidence 999999999999999999999999999986432111 11 11111110011111110000 000000 00
Q ss_pred H-HHHHHHHhhcccCchhhhhhhhhhcC------------CccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC
Q 024681 167 A-AVREFSRTLFNMRPDISLFVSKTVFD------------TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233 (264)
Q Consensus 167 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 233 (264)
. ....+...+................. ..........++|+++|+|++|.++|++..+.+.+.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 234 (267)
T 3sty_A 156 IAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPP- 234 (267)
T ss_dssp ECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSCC-
T ss_pred hhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCCC-
Confidence 0 00011111111111110000000000 011111122369999999999999999999999999999
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.++|+++.+.|.+|+++
T Consensus 235 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 265 (267)
T 3sty_A 235 DEVKEIEGSDHVTMMSKPQQLFTTLLSIANK 265 (267)
T ss_dssp SEEEECTTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred ceEEEeCCCCccccccChHHHHHHHHHHHHh
Confidence 8999999999999999999999999999863
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=239.87 Aligned_cols=239 Identities=18% Similarity=0.261 Sum_probs=169.5
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhh-c-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPY-L-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~-l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|...++++|+|||+||++++...|..+++. + +||+|+++|+||+|.|+........+ +++++++++.++++.++
T Consensus 14 ~~~~~~~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 92 (279)
T 4g9e_A 14 RIAVRESEGEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSY-SMEGYADAMTEVMQQLG 92 (279)
T ss_dssp EEEEEECCCCEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHS-SHHHHHHHHHHHHHHHT
T ss_pred eEEEEecCCCCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCC-CHHHHHHHHHHHHHHhC
Confidence 678888887778999999999999999999998 5 99999999999999997642222344 49999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC------------CCCCccHHHHHHHHHHHHhhhhhh
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED------------YHGGFEEAEIDKVFRAMEANYEAW 152 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~ 152 (264)
.++++++|||+||.+|+.+|.++|+ +.++|++++++....... ............+.....
T Consensus 93 ~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 165 (279)
T 4g9e_A 93 IADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTC------ 165 (279)
T ss_dssp CCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHH------
T ss_pred CCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhc------
Confidence 9999999999999999999999998 899999988643321100 000111111111111100
Q ss_pred hhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHH-HHcC
Q 024681 153 AYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ-RHLG 231 (264)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-~~~~ 231 (264)
. ............. ...................+....+.++++|+++++|++|.++|.+..+.+. +.++
T Consensus 166 -----~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 236 (279)
T 4g9e_A 166 -----G---EPFEASLLDIVAR-TDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLW 236 (279)
T ss_dssp -----C---SSCCHHHHHHHHH-SCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBG
T ss_pred -----c---CcccHHHHHHHHh-hhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCC
Confidence 0 0000111111111 0000001111111122234445556778999999999999999999888887 6777
Q ss_pred CCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 232 GRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+ +++++++++||+++.++|+++.+.|.+||+
T Consensus 237 ~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 267 (279)
T 4g9e_A 237 E-GKTHVIDNAGHAPFREAPAEFDAYLARFIR 267 (279)
T ss_dssp G-GSCEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred C-CeEEEECCCCcchHHhCHHHHHHHHHHHHH
Confidence 7 899999999999999999999999999996
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=226.73 Aligned_cols=244 Identities=17% Similarity=0.168 Sum_probs=166.1
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCC-CCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCA-GSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.++|...|+ ++|+||++||++++...|..+++.| +||+|+++|+||+ |.|... ...+ +++++++|+.++++.+
T Consensus 56 ~~~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~---~~~~-~~~~~~~~l~~~l~~l 131 (306)
T 2r11_A 56 QTHVIASGPEDAPPLVLLHGALFSSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPE---NVSG-TRTDYANWLLDVFDNL 131 (306)
T ss_dssp EEEEEEESCTTSCEEEEECCTTTCGGGGTTTHHHHHHHSEEEEECCTTSSSSCEEC---SCCC-CHHHHHHHHHHHHHHT
T ss_pred eEEEEeeCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCCCCCCCCCC---CCCC-CHHHHHHHHHHHHHhc
Confidence 577888886 4689999999999999999999999 9999999999999 888653 1234 4999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh-hhhhhhhcccccCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN-YEAWAYGYAPLAVG 162 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 162 (264)
+.++++|+|||+||.+|+.+|.++|++|+++|++++....... ............... ...+........ .
T Consensus 132 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (306)
T 2r11_A 132 GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPF-------HHDFYKYALGLTASNGVETFLNWMMNDQ-N 203 (306)
T ss_dssp TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCC-------CHHHHHHHHTTTSTTHHHHHHHHHTTTC-C
T ss_pred CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcc-------cHHHHHHHhHHHHHHHHHHHHHHhhCCc-c
Confidence 9999999999999999999999999999999999987543211 111111000000000 000001111100 0
Q ss_pred CCChH--HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHH-HHcCCCceEEEe
Q 024681 163 ADVPA--AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ-RHLGGRNTVELL 239 (264)
Q Consensus 163 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~ 239 (264)
..... ........+.. ....................+.++++|+|+++|++|.++|.+..+++. +.+++ ++++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~ 281 (306)
T 2r11_A 204 VLHPIFVKQFKAGVMWQD-GSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPD-IEAEVI 281 (306)
T ss_dssp CSCHHHHHHHHHHHHCCS-SSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHSTT-CEEEEE
T ss_pred ccccccccccHHHHHHHH-hhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHCCC-CEEEEe
Confidence 00000 00011111110 000000000011111234456788999999999999999988887544 46787 899999
Q ss_pred cCCCCcccccChhcHHHHHHHHhcC
Q 024681 240 KIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 240 ~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++||+++.++|+++.+.|.+||++
T Consensus 282 ~~~gH~~~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 282 KNAGHVLSMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp TTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred CCCCCCCcccCHHHHHHHHHHHHhC
Confidence 9999999999999999999999974
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=220.45 Aligned_cols=232 Identities=19% Similarity=0.290 Sum_probs=170.6
Q ss_pred eeEEEEeCC--CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH---
Q 024681 7 ALHVRVVGT--GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL--- 80 (264)
Q Consensus 7 ~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~--- 80 (264)
+++|...|+ ++|+||++||++++...|. ++..| +||+|+++|+||+|.|+.. ..+ +++++++|+.+++
T Consensus 4 ~l~y~~~g~~~~~~~vv~~hG~~~~~~~~~-~~~~l~~g~~v~~~d~~g~g~s~~~----~~~-~~~~~~~~~~~~~~~~ 77 (245)
T 3e0x_A 4 MLHYVHVGNKKSPNTLLFVHGSGCNLKIFG-ELEKYLEDYNCILLDLKGHGESKGQ----CPS-TVYGYIDNVANFITNS 77 (245)
T ss_dssp CCCEEEEECTTCSCEEEEECCTTCCGGGGT-TGGGGCTTSEEEEECCTTSTTCCSC----CCS-SHHHHHHHHHHHHHHC
T ss_pred eeEEEecCCCCCCCEEEEEeCCcccHHHHH-HHHHHHhCCEEEEecCCCCCCCCCC----CCc-CHHHHHHHHHHHHHhh
Confidence 567888776 4689999999999999999 88889 9999999999999999742 334 4999999999999
Q ss_pred ---HHhCCCeEEEEecChhHHHHHHHHHh-CCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 81 ---DTLGVNRCAYVGHSVSAMIGLLASIR-RPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 81 ---~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
+.++ +++++|||+||.+++.+|.+ +|+ ++++|++++...... ........+... ....+ +
T Consensus 78 ~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~-------~~~~~~~~~~~~---~~~~~---~ 141 (245)
T 3e0x_A 78 EVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDK-------LDKDFMEKIYHN---QLDNN---Y 141 (245)
T ss_dssp TTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTT-------SCHHHHHHHHTT---CCCHH---H
T ss_pred hhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCcccc-------ccHHHHHHHHHH---HHHhh---c
Confidence 8887 99999999999999999999 999 999999998654311 111111111110 00000 0
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 236 (264)
...............+...... .+.............+....+.++++|+++++|++|.++|.+..+.+.+.+++ +++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~ 219 (245)
T 3e0x_A 142 LLECIGGIDNPLSEKYFETLEK-DPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVEN-SEL 219 (245)
T ss_dssp HHHHHTCSCSHHHHHHHTTSCS-SHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSSS-EEE
T ss_pred CcccccccchHHHHHHHHHHhc-CcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC-ceE
Confidence 0000011111122222222222 33333333333344556667788899999999999999999999999999998 899
Q ss_pred EEecCCCCcccccChhcHHHHHHHHh
Q 024681 237 ELLKIEGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~~~~~~i~~fl 262 (264)
++++++||+++.++|+++.+.|.+||
T Consensus 220 ~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 220 KIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp EEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred EEeCCCCcceEEecHHHHHHHHHhhC
Confidence 99999999999999999999999986
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-37 Score=225.86 Aligned_cols=234 Identities=13% Similarity=0.111 Sum_probs=148.9
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCe--EEEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNR--CAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ 91 (264)
++|+|||+||++++...|..+++.| ++|+|+++|+||||.|+.. ..+ +++++++|+.++++.++.++ ++|+
T Consensus 15 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~----~~~-~~~~~a~~l~~~l~~l~~~~~p~~lv 89 (264)
T 1r3d_A 15 RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPER----HCD-NFAEAVEMIEQTVQAHVTSEVPVILV 89 (264)
T ss_dssp TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC------------CHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCC----Ccc-CHHHHHHHHHHHHHHhCcCCCceEEE
Confidence 3489999999999999999999999 7999999999999999753 223 48899999999999998876 9999
Q ss_pred ecChhHHHHHH---HHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH-hhhhhhhhh-cccccCCCCCh
Q 024681 92 GHSVSAMIGLL---ASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME-ANYEAWAYG-YAPLAVGADVP 166 (264)
Q Consensus 92 G~S~Gg~~a~~---~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~ 166 (264)
||||||.+|+. +|.++|++|+++|++++.+........ ............... ......... +....+.....
T Consensus 90 GhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1r3d_A 90 GYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEK--AARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNH 167 (264)
T ss_dssp EETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHH--HHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTTCCH
T ss_pred EECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhh--hhhhcccHHHHHHhccccHHHHHHHHhhhhhhhccCH
Confidence 99999999999 888999999999999875322110000 000000000000000 001111111 11111111122
Q ss_pred HHHHHHHHhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCC
Q 024681 167 AAVREFSRTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG 243 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 243 (264)
.....+................... ...+....+.++++|+++|+|++|..++ .+.+.++ .++++++++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~~--~~~~~i~~~g 240 (264)
T 1r3d_A 168 EQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESSG--LSYSQVAQAG 240 (264)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHHC--SEEEEETTCC
T ss_pred HHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHhC--CcEEEcCCCC
Confidence 2222222222211221111111111 1234455677899999999999998542 2344444 5789999999
Q ss_pred CcccccChhcHHHHHHHHhc
Q 024681 244 HLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 244 H~~~~~~~~~~~~~i~~fl~ 263 (264)
|+++.|+|+++++.|.+|++
T Consensus 241 H~~~~e~p~~~~~~i~~fl~ 260 (264)
T 1r3d_A 241 HNVHHEQPQAFAKIVQAMIH 260 (264)
T ss_dssp SCHHHHCHHHHHHHHHHHHH
T ss_pred CchhhcCHHHHHHHHHHHHH
Confidence 99999999999999999986
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=221.34 Aligned_cols=211 Identities=14% Similarity=0.181 Sum_probs=153.4
Q ss_pred CceEEEecCCCCC--hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC----CCeE
Q 024681 17 DRILVLAHGFGTD--QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG----VNRC 88 (264)
Q Consensus 17 ~p~vv~~hG~~~~--~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 88 (264)
.|+||++||++++ ...|..+++.| .||+|+++|+||||.|+.. ...++ +.++++|+.++++.+. .+++
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~~-~~~~~~d~~~~~~~l~~~~~~~~~ 102 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGK---FEDHT-LFKWLTNILAVVDYAKKLDFVTDI 102 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSC---GGGCC-HHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCc---cccCC-HHHHHHHHHHHHHHHHcCcccceE
Confidence 4789999999999 88999999999 7999999999999999753 23444 8889999999998884 4689
Q ss_pred EEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhh-hcccccCCCCChH
Q 024681 89 AYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAY-GYAPLAVGADVPA 167 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 167 (264)
+|+||||||.+++.+|.++|++|+++|+++|.... .. ...... ... .+...........
T Consensus 103 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-----------~~-------~~~~~~--~~~~~~~~~~~~~~~~~ 162 (251)
T 2wtm_A 103 YMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMI-----------PE-------IARTGE--LLGLKFDPENIPDELDA 162 (251)
T ss_dssp EEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTH-----------HH-------HHHHTE--ETTEECBTTBCCSEEEE
T ss_pred EEEEECcchHHHHHHHHhCcccceEEEEECcHHHh-----------HH-------HHhhhh--hccccCCchhcchHHhh
Confidence 99999999999999999999999999999875221 00 000000 000 0000000000000
Q ss_pred HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccc
Q 024681 168 AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPH 247 (264)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 247 (264)
.. .......+.......+....+.++++|+|+++|++|.++|++.++.+.+.+++ +++++++++||++
T Consensus 163 --------~~--~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~gH~~- 230 (251)
T 2wtm_A 163 --------WD--GRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKN-CKLVTIPGDTHCY- 230 (251)
T ss_dssp --------TT--TEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSSS-EEEEEETTCCTTC-
T ss_pred --------hh--ccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCCC-cEEEEECCCCccc-
Confidence 00 00000011111122233445667899999999999999999999999999988 8999999999999
Q ss_pred ccChhcHHHHHHHHhc
Q 024681 248 LSAPAIVGPVIRRALS 263 (264)
Q Consensus 248 ~~~~~~~~~~i~~fl~ 263 (264)
.++|+++.+.|.+||+
T Consensus 231 ~~~~~~~~~~i~~fl~ 246 (251)
T 2wtm_A 231 DHHLELVTEAVKEFML 246 (251)
T ss_dssp TTTHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHH
Confidence 9999999999999986
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=227.47 Aligned_cols=252 Identities=19% Similarity=0.228 Sum_probs=163.2
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCC--cccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDF--RRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~--~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|...|++ |+|||+||++++...|..+.+.| ++|+|+++|+||||.|+.+.... ..|+ .+.+++|+.++++.
T Consensus 15 ~~~~~~~~g~g-~~~vllHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 92 (291)
T 3qyj_A 15 ARINLVKAGHG-APLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINYS-KRVMAQDQVEVMSK 92 (291)
T ss_dssp CEEEEEEECCS-SEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCGGGGGGS-HHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCC-CeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccccccC-HHHHHHHHHHHHHH
Confidence 46888888876 58999999999999999999999 99999999999999997642211 2355 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCc------------cHHHHHHHHHHHHhhhh
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGF------------EEAEIDKVFRAMEANYE 150 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 150 (264)
++.++++++||||||.+|+.+|.++|++|+++|++++.+............ .......+. .....
T Consensus 93 l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 169 (291)
T 3qyj_A 93 LGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDNLPETLI---GANPE 169 (291)
T ss_dssp TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTCSTTHHHHHH---HTCHH
T ss_pred cCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhccCCCchHHHH---cCCHH
Confidence 999999999999999999999999999999999998754210000000000 000000000 00000
Q ss_pred hhhhhcccc---cCCCCChHHHHHHHHhhcccCc-hhhhhhhhhhc----CCccccccCCcccCEEEEecCCCCCcch-h
Q 024681 151 AWAYGYAPL---AVGADVPAAVREFSRTLFNMRP-DISLFVSKTVF----DTDLRGILGLVRVPCVIIQTSKDVSVPV-S 221 (264)
Q Consensus 151 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~i~~P~l~i~g~~D~~~~~-~ 221 (264)
.+....... ......++....+...+..... ......+.... ..+....+.++++|+|+|+|++|.+.+. .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~ 249 (291)
T 3qyj_A 170 YYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYD 249 (291)
T ss_dssp HHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCEEEEEETTSSHHHHSC
T ss_pred HHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCCccccceEEEecccccccchhh
Confidence 011000000 0001112233333332221000 00001111111 1112234678999999999999976543 3
Q ss_pred hHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 222 VAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
....+.+..++ .+...++ +||+++.|+|+++++.|.+||++
T Consensus 250 ~~~~~~~~~~~-~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 250 VLATWRERAID-VSGQSLP-CGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp HHHHHHTTBSS-EEEEEES-SSSCHHHHSHHHHHHHHHHHHHC
T ss_pred HHHHHHhhcCC-cceeecc-CCCCchhhCHHHHHHHHHHHHhc
Confidence 44555566666 7788887 99999999999999999999964
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=234.14 Aligned_cols=256 Identities=15% Similarity=0.209 Sum_probs=167.1
Q ss_pred eeeEEEEeCC----CCceEEEecCCCCChhh-------------HHHhh---hhc--CCceEEEecCCCCCCCCC-----
Q 024681 6 EALHVRVVGT----GDRILVLAHGFGTDQSA-------------WQRIL---PYL--NHHRVIMFDLVCAGSVNP----- 58 (264)
Q Consensus 6 ~~~~~~~~g~----~~p~vv~~hG~~~~~~~-------------~~~~~---~~l--~g~~v~~~d~~g~G~s~~----- 58 (264)
.+|+|...|+ +.|+||++||++++... |..++ +.| ++|+|+++|+||||.|+.
T Consensus 27 ~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~ 106 (377)
T 3i1i_A 27 VQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVIT 106 (377)
T ss_dssp EEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCC
T ss_pred eeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCccc
Confidence 4688999885 24799999999999776 88888 566 899999999999977431
Q ss_pred ---CCCCC----------cccchHHHHHHHHHHHHHHhCCCeEE-EEecChhHHHHHHHHHhCCCccceeEE-ecCCCCC
Q 024681 59 ---DYFDF----------RRYTTLDAYVDDLLNILDTLGVNRCA-YVGHSVSAMIGLLASIRRPDLFTKLIL-IGASPRF 123 (264)
Q Consensus 59 ---~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl-~~~~~~~ 123 (264)
...++ ..|+ ++++++|+.++++.++.++++ |+||||||.+|+.+|.++|++|+++|+ +++++..
T Consensus 107 ~g~~~~~p~~~~~~~~~~~~~~-~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 185 (377)
T 3i1i_A 107 TGPKSINPKTGDEYAMDFPVFT-FLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNP 185 (377)
T ss_dssp CSTTSBCTTTSSBCGGGSCCCC-HHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBCC
T ss_pred CCCCCCCCCCCCcccCCCCCCC-HHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCcC
Confidence 11111 1344 999999999999999999986 999999999999999999999999999 7665431
Q ss_pred CCC---------------CCCC-----CCccHHHHHHHHHHHH----hhhhhhhhhcccccCCCC-----C-hHHHHHHH
Q 024681 124 LND---------------EDYH-----GGFEEAEIDKVFRAME----ANYEAWAYGYAPLAVGAD-----V-PAAVREFS 173 (264)
Q Consensus 124 ~~~---------------~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~ 173 (264)
... ..+. .......+.. ..... .....+...+........ . ......+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (377)
T 3i1i_A 186 IITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQL-ANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKEI 264 (377)
T ss_dssp HHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHH-HHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHHHHH
T ss_pred CchhhHHHHHHHHHHhcCCCccCCccccCCccchHHH-HHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHHHHH
Confidence 000 0000 0000000000 00000 000111111111110000 0 00112211
Q ss_pred Hh-----hcccCchhhhhhhhhhc-------CCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc----CCCceEE
Q 024681 174 RT-----LFNMRPDISLFVSKTVF-------DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL----GGRNTVE 237 (264)
Q Consensus 174 ~~-----~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~ 237 (264)
.. ...............+. ..+....+.++++|+|+|+|++|.++|++..+.+++.+ ++ ++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~-~~~~ 343 (377)
T 3i1i_A 265 NKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKY-AEVY 343 (377)
T ss_dssp HHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCC-EEEC
T ss_pred HHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCC-ceEE
Confidence 11 11122222222222221 12335567789999999999999999999999999999 88 8999
Q ss_pred EecC-CCCcccccChhcHHHHHHHHhcC
Q 024681 238 LLKI-EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 238 ~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++++ +||+++.|+|+++.+.|.+||++
T Consensus 344 ~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 371 (377)
T 3i1i_A 344 EIESINGHMAGVFDIHLFEKKVYEFLNR 371 (377)
T ss_dssp CBCCTTGGGHHHHCGGGTHHHHHHHHHS
T ss_pred EcCCCCCCcchhcCHHHHHHHHHHHHHh
Confidence 9998 99999999999999999999964
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=218.82 Aligned_cols=247 Identities=15% Similarity=0.148 Sum_probs=168.2
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
..++|...|+ ++|+||++||++++...|..+++.| .||+|+++|+||+|.|.... ....+ +++++++|+.++++.
T Consensus 14 ~~l~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~-~~~~~~~~~~~~~~~ 91 (286)
T 3qit_A 14 NQICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLE-MVTSY-SSLTFLAQIDRVIQE 91 (286)
T ss_dssp EEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS-SGGGC-SHHHHHHHHHHHHHH
T ss_pred ceEEEeecCCCCCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCC-CCCCc-CHHHHHHHHHHHHHh
Confidence 3578888886 4689999999999999999999999 78999999999999997642 12345 499999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhh--------hhhhh
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANY--------EAWAY 154 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 154 (264)
++.++++++|||+||.+++.+|.++|++|+++|++++......... ......+........... .....
T Consensus 92 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (286)
T 3qit_A 92 LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKK---ESAVNQLTTCLDYLSSTPQHPIFPDVATAAS 168 (286)
T ss_dssp SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC------CCHHHHHHHHHHHHTCCCCCCCBSSHHHHHH
T ss_pred cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccc---hhhhHHHHHHHHHHhccccccccccHHHHHH
Confidence 9999999999999999999999999999999999998654332210 001111111111110000 00000
Q ss_pred hcccccCCCCChHHHHHHHHhhcccCc---------hhhhhhhhhh-----cCCccccccCCcccCEEEEecCCCCCcch
Q 024681 155 GYAPLAVGADVPAAVREFSRTLFNMRP---------DISLFVSKTV-----FDTDLRGILGLVRVPCVIIQTSKDVSVPV 220 (264)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 220 (264)
.. ..............+......... .......... ...+....+.++++|+++++|++|.++|.
T Consensus 169 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 247 (286)
T 3qit_A 169 RL-RQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRP 247 (286)
T ss_dssp HH-HHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCSCEEEEEETTCCSSCH
T ss_pred Hh-hcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhccCCCeEEEEeCCCcccCH
Confidence 00 000111111122222221111100 0000000000 11233344567899999999999999999
Q ss_pred hhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHH
Q 024681 221 SVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRR 260 (264)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 260 (264)
+..+.+.+.+++ ++++++++ ||+++.++|+++++.|.+
T Consensus 248 ~~~~~~~~~~~~-~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 248 EDLQQQKMTMTQ-AKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp HHHHHHHHHSTT-SEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred HHHHHHHHHCCC-CeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 999999999998 89999998 999999999999998864
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=223.16 Aligned_cols=248 Identities=16% Similarity=0.206 Sum_probs=167.1
Q ss_pred eeEEEEeCC----CCceEEEecCCCCChh-------------hHHHhhh---hc--CCceEEEecCCC--CCCCCCCCCC
Q 024681 7 ALHVRVVGT----GDRILVLAHGFGTDQS-------------AWQRILP---YL--NHHRVIMFDLVC--AGSVNPDYFD 62 (264)
Q Consensus 7 ~~~~~~~g~----~~p~vv~~hG~~~~~~-------------~~~~~~~---~l--~g~~v~~~d~~g--~G~s~~~~~~ 62 (264)
.++|...|+ ++|+|||+||++++.. .|..++. .| ++|+|+++|+|| +|.|.+....
T Consensus 32 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~ 111 (366)
T 2pl5_A 32 VIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIH 111 (366)
T ss_dssp EEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBC
T ss_pred eeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCC
Confidence 688988887 3589999999999988 7888884 44 899999999999 8988653211
Q ss_pred Cc----------ccchHHHHHHHHHHHHHHhCCCeE-EEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCC
Q 024681 63 FR----------RYTTLDAYVDDLLNILDTLGVNRC-AYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG 131 (264)
Q Consensus 63 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~ 131 (264)
+. .|+ ++++++|+.++++.++.+++ +|+||||||.+|+.+|.++|++|+++|++++.......
T Consensus 112 ~~~~~~~~~~~~~~~-~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----- 185 (366)
T 2pl5_A 112 PETSTPYGSRFPFVS-IQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAM----- 185 (366)
T ss_dssp TTTSSBCGGGSCCCC-HHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHH-----
T ss_pred CCCCccccCCCCccc-HHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCc-----
Confidence 11 344 99999999999999999998 89999999999999999999999999999986542110
Q ss_pred CccHHHHHHH-HHHHHh------------------------------hhhhhhhhcccccCCC---CChHHHHHHHHh--
Q 024681 132 GFEEAEIDKV-FRAMEA------------------------------NYEAWAYGYAPLAVGA---DVPAAVREFSRT-- 175 (264)
Q Consensus 132 ~~~~~~~~~~-~~~~~~------------------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-- 175 (264)
....... ...+.. ....+...+....... ........+...
T Consensus 186 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (366)
T 2pl5_A 186 ---QIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQG 262 (366)
T ss_dssp ---HHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTT
T ss_pred ---cchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHH
Confidence 0000000 000000 0000001111110000 000000000000
Q ss_pred ---hcccCchhhhhhhhhhcCCc------cccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC----CCceEEEe-cC
Q 024681 176 ---LFNMRPDISLFVSKTVFDTD------LRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG----GRNTVELL-KI 241 (264)
Q Consensus 176 ---~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~-~~ 241 (264)
...............+...+ ....+.++++|+|+|+|++|.++|++..+.+.+.++ + ++++++ ++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 341 (366)
T 2pl5_A 263 ESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKR-VFYVELQSG 341 (366)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCC-EEEEEECCC
T ss_pred HhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccC-eEEEEeCCC
Confidence 00001111111111111111 234678899999999999999999999999999998 6 899999 89
Q ss_pred CCCcccccChhcHHHHHHHHhcC
Q 024681 242 EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 242 ~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+||+++.++|+++.+.|.+||++
T Consensus 342 ~gH~~~~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 342 EGHDSFLLKNPKQIEILKGFLEN 364 (366)
T ss_dssp BSSGGGGSCCHHHHHHHHHHHHC
T ss_pred CCcchhhcChhHHHHHHHHHHcc
Confidence 99999999999999999999974
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=232.13 Aligned_cols=256 Identities=18% Similarity=0.204 Sum_probs=172.7
Q ss_pred eeEEEEeCC----CCceEEEecCCCCChhh---HHHhhh---hc--CCceEEEecCCC--CCCCCCCCCCCc--------
Q 024681 7 ALHVRVVGT----GDRILVLAHGFGTDQSA---WQRILP---YL--NHHRVIMFDLVC--AGSVNPDYFDFR-------- 64 (264)
Q Consensus 7 ~~~~~~~g~----~~p~vv~~hG~~~~~~~---~~~~~~---~l--~g~~v~~~d~~g--~G~s~~~~~~~~-------- 64 (264)
.++|...|+ +.|+|||+||++++... |..++. .| ++|+|+++|+|| +|.|.+....+.
T Consensus 95 ~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~ 174 (444)
T 2vat_A 95 PVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYG 174 (444)
T ss_dssp EEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCG
T ss_pred eEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccccccc
Confidence 588999986 25799999999999988 998886 46 899999999999 688864211111
Q ss_pred ----ccchHHHHHHHHHHHHHHhCCCe-EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC------------
Q 024681 65 ----RYTTLDAYVDDLLNILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE------------ 127 (264)
Q Consensus 65 ----~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~------------ 127 (264)
.+ +++++++|+.++++.++.++ ++++||||||.+|+.+|.++|++|+++|++++........
T Consensus 175 ~~f~~~-t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 253 (444)
T 2vat_A 175 AKFPRT-TIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCIY 253 (444)
T ss_dssp GGCCCC-CHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHHH
T ss_pred cccccc-cHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHHHHh
Confidence 24 49999999999999999998 9999999999999999999999999999999865421100
Q ss_pred ---CCCCC------ccHHH--HHHHHHHHH-hhhhhhhhhcccccCC-C-------------------------CChHHH
Q 024681 128 ---DYHGG------FEEAE--IDKVFRAME-ANYEAWAYGYAPLAVG-A-------------------------DVPAAV 169 (264)
Q Consensus 128 ---~~~~~------~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~-~-------------------------~~~~~~ 169 (264)
.+... ..... ...+...+. .....+...+...... . ......
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (444)
T 2vat_A 254 DDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAV 333 (444)
T ss_dssp HSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGGH
T ss_pred cCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCchhhH
Confidence 00000 00000 000000000 0011111222111110 0 000011
Q ss_pred HHHH-----HhhcccCchhhhhhhhhhcCC--------ccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE
Q 024681 170 REFS-----RTLFNMRPDISLFVSKTVFDT--------DLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236 (264)
Q Consensus 170 ~~~~-----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 236 (264)
+.+. .................+... +....+.++++|+|+|+|++|.++|.+..+.+++.+++ +++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p~-~~~ 412 (444)
T 2vat_A 334 SSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPN-SRL 412 (444)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTT-EEE
T ss_pred HHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCCC-cEE
Confidence 1111 111122222222222222222 25566788999999999999999999999999999998 899
Q ss_pred EEec-CCCCcccccChhcHHHHHHHHhcC
Q 024681 237 ELLK-IEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 237 ~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++++ ++||+++.++|+++.+.|.+||++
T Consensus 413 ~~i~~~~GH~~~~e~p~~~~~~i~~fL~~ 441 (444)
T 2vat_A 413 CVVDTNEGHDFFVMEADKVNDAVRGFLDQ 441 (444)
T ss_dssp EECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred EEeCCCCCcchHHhCHHHHHHHHHHHHHH
Confidence 9999 899999999999999999999974
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-37 Score=229.12 Aligned_cols=247 Identities=11% Similarity=0.119 Sum_probs=159.2
Q ss_pred eeEEEEeCCCCceEEEecCC--CCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGTGDRILVLAHGF--GTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~--~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.++|.. ++++|+|||+||+ +++...|..+++.| ++|+|+++|+||||.|+.. ....++ ++++++|+.++++.+
T Consensus 32 ~~~~~~-~~~~p~vv~lHG~G~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~--~~~~~~-~~~~~~~l~~~l~~~ 107 (292)
T 3l80_A 32 PIYTCH-REGNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVS--NQANVG-LRDWVNAILMIFEHF 107 (292)
T ss_dssp CEEEEE-ECCSSEEEEECCSSSCCHHHHTHHHHTTSCTTSEEEEECCTTSTTSCCC--CCTTCC-HHHHHHHHHHHHHHS
T ss_pred eEEEec-CCCCCEEEEEcCCCCCcHHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCC--Cccccc-HHHHHHHHHHHHHHh
Confidence 344543 3456899999954 66688999999999 9999999999999999832 133454 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhhh-hhhhcccccC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYEA-WAYGYAPLAV 161 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~ 161 (264)
+.++++|+||||||.+|+.+|.++|++|+++|++++................. .......... .... .........+
T Consensus 108 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (292)
T 3l80_A 108 KFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQ-LALRRQKLKTAADRLNYLKDLSRSHF 186 (292)
T ss_dssp CCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHH-HHHHHHTCCSHHHHHHHHHHHHHHHS
T ss_pred CCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchh-HHHHHHHHhccCchhhhHhhcccccc
Confidence 99999999999999999999999999999999999653211100000000000 0000000000 0000 0000000000
Q ss_pred CCCCh----HHHHHHHHhhcccCc-hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE
Q 024681 162 GADVP----AAVREFSRTLFNMRP-DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236 (264)
Q Consensus 162 ~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 236 (264)
..... ............... .. ..........+..+.+.+ ++|+++|+|++|..++++ . .+.+.+++ .+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~~-~~- 260 (292)
T 3l80_A 187 SSQQFKQLWRGYDYCQRQLNDVQSLPD-FKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKHTQ-TK- 260 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTTSTT-CCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCTT-CE-
T ss_pred CHHHHHHhHHHHHHHHHHHHhhhhccc-cchhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccCCC-ce-
Confidence 00000 011111111111111 00 111111122233345666 999999999999999988 6 78888888 77
Q ss_pred EEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 237 ELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++++++||+++.|+|+++.+.|.+||++
T Consensus 261 ~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (292)
T 3l80_A 261 LILCGQHHYLHWSETNSILEKVEQLLSN 288 (292)
T ss_dssp EEECCSSSCHHHHCHHHHHHHHHHHHHT
T ss_pred eeeCCCCCcchhhCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999974
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=224.40 Aligned_cols=256 Identities=16% Similarity=0.144 Sum_probs=168.5
Q ss_pred eeeEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 6 ~~~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
.+++|...|+ .+|+||++||++++...|..+++.| .||+|+++|+||+|.|.... ....++ ++++++|+.+++
T Consensus 13 ~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~-~~~~~~-~~~~~~~~~~~~ 90 (356)
T 2e3j_A 13 TRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYR-VQKAYR-IKELVGDVVGVL 90 (356)
T ss_dssp EEEEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCC-SGGGGS-HHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC-cccccC-HHHHHHHHHHHH
Confidence 3688988885 5689999999999999999999999 68999999999999997542 122454 999999999999
Q ss_pred HHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC---------CCCC-CCC----CCC------ccHHHHH-
Q 024681 81 DTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR---------FLND-EDY----HGG------FEEAEID- 139 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~---------~~~~-~~~----~~~------~~~~~~~- 139 (264)
+.++.++++++||||||.+++.+|.++|++|+++|+++++.. .... ... ... .......
T Consensus 91 ~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (356)
T 2e3j_A 91 DSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWYQDYFAV 170 (356)
T ss_dssp HHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCGGGSSCCSSCSSCCSCHHHHHHSSSCSSEEEHHHHHHH
T ss_pred HHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcccccccccCCCCCcccccchHHHHHhhcCCcHHHHHHHhc
Confidence 999999999999999999999999999999999999997641 0000 000 000 0000000
Q ss_pred -----HHHH-HHHhhhhhhhhh-----------------------------------------ccccc-----CCCC-Ch
Q 024681 140 -----KVFR-AMEANYEAWAYG-----------------------------------------YAPLA-----VGAD-VP 166 (264)
Q Consensus 140 -----~~~~-~~~~~~~~~~~~-----------------------------------------~~~~~-----~~~~-~~ 166 (264)
.... ........+... +.... .... ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (356)
T 2e3j_A 171 QDGIITEIEEDLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARLKDAFVYPETMPAWFTE 250 (356)
T ss_dssp CSHHHHHHHTTHHHHHHHHHHHTSHHHHHHHHHCCC-------CCCGGGTSTTSTTEEETTSCGGGGCCCCSSCCTTSCH
T ss_pred ccchHHHHHHhHHHHHHHHhhccccchhhccchhhcccccccccccccccccccccccccchhhhhcccccccccccCCH
Confidence 0000 000000000000 00000 0000 11
Q ss_pred HHHHHHHHhhcccCchhhhhhhhhhc-CCcccc--ccCCcccCEEEEecCCCCCcch--hhHHHHHHHcCCCc-eEEEec
Q 024681 167 AAVREFSRTLFNMRPDISLFVSKTVF-DTDLRG--ILGLVRVPCVIIQTSKDVSVPV--SVAEYLQRHLGGRN-TVELLK 240 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~i~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~~-~~~~~~ 240 (264)
.....+...+..........++.... ..+... .+.++++|+|+|+|++|.++|. +..+.+.+.+++ + ++++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~p~~~~~~~~l~~~~p~-~~~~~~i~ 329 (356)
T 2e3j_A 251 ADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWGAQAIERAHEVMPN-YRGTHMIA 329 (356)
T ss_dssp HHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTSCCCSCEEEEEETTCHHHHHTHHHHHTHHHHCTT-EEEEEEES
T ss_pred HHHHHHHHHhcccCCchhHHHHHhcccChhhhHhhcCCccCCCEEEEecCCCccccccHHHHHHHHHhCcC-cceEEEec
Confidence 12222222221111111111111000 000111 3478899999999999999984 888999999998 7 999999
Q ss_pred CCCCcccccChhcHHHHHHHHhcC
Q 024681 241 IEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++||+++.|+|+++.+.|.+||++
T Consensus 330 ~aGH~~~~e~p~~~~~~i~~fl~~ 353 (356)
T 2e3j_A 330 DVGHWIQQEAPEETNRLLLDFLGG 353 (356)
T ss_dssp SCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred CcCcccchhCHHHHHHHHHHHHhh
Confidence 999999999999999999999964
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=217.69 Aligned_cols=253 Identities=16% Similarity=0.200 Sum_probs=156.6
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+++|...|+ +.++|||+||++++.. +..+...+ .+|+|+++|+||||.|++.. ....++ ++++++|+.++++.+
T Consensus 26 ~l~~~~~g~~~g~~vvllHG~~~~~~-~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~-~~~~~~-~~~~~~dl~~l~~~l 102 (317)
T 1wm1_A 26 RIYWELSGNPNGKPAVFIHGGPGGGI-SPHHRQLFDPERYKVLLFDQRGCGRSRPHA-SLDNNT-TWHLVADIERLREMA 102 (317)
T ss_dssp EEEEEEEECTTSEEEEEECCTTTCCC-CGGGGGGSCTTTEEEEEECCTTSTTCBSTT-CCTTCS-HHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCCCcEEEECCCCCccc-chhhhhhccccCCeEEEECCCCCCCCCCCc-cccccc-HHHHHHHHHHHHHHc
Confidence 578888886 4578999999876553 22334455 68999999999999997532 123454 899999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCC-----CCCccHHHHHHHHHHHHhhhh-hhhhhcc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDY-----HGGFEEAEIDKVFRAMEANYE-AWAYGYA 157 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 157 (264)
+.++++|+||||||.+|+.+|.++|++|+++|++++.........+ ...........+......... .....+.
T Consensus 103 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (317)
T 1wm1_A 103 GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYR 182 (317)
T ss_dssp TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHH
T ss_pred CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHHHhhccchhhcchHHHHH
Confidence 9999999999999999999999999999999999874321000000 000000000000000000000 0000000
Q ss_pred cccCCCCChHH----HHHH---HHhhcccC--ch-------hh-hh---h-----h-hhhcC-Cc-cccccCCcc-cCEE
Q 024681 158 PLAVGADVPAA----VREF---SRTLFNMR--PD-------IS-LF---V-----S-KTVFD-TD-LRGILGLVR-VPCV 208 (264)
Q Consensus 158 ~~~~~~~~~~~----~~~~---~~~~~~~~--~~-------~~-~~---~-----~-~~~~~-~~-~~~~~~~i~-~P~l 208 (264)
....... ... ...+ ........ +. .. .. . . ..+.. .. ....+.+++ +|+|
T Consensus 183 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~l 261 (317)
T 1wm1_A 183 QRLTSAD-PQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAV 261 (317)
T ss_dssp HHHTCSC-HHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEE
T ss_pred hhhcCCC-ccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccccchhhHhhcccccCCCEE
Confidence 0000000 000 0000 00000000 00 00 00 0 0 00111 11 234556775 9999
Q ss_pred EEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccccc-ChhcHHHHHHHHhcC
Q 024681 209 IIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS-APAIVGPVIRRALSR 264 (264)
Q Consensus 209 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 264 (264)
+|+|++|.++|++..+.+.+.+++ +++++++++||+++.+ .++++.+.|.+|+.+
T Consensus 262 ii~G~~D~~~~~~~~~~l~~~~p~-~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~~ 317 (317)
T 1wm1_A 262 IVHGRYDMACQVQNAWDLAKAWPE-AELHIVEGAGHSYDEPGILHQLMIATDRFAGK 317 (317)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCTT-SEEEEETTCCSSTTSHHHHHHHHHHHHHHTC-
T ss_pred EEEecCCCCCCHHHHHHHHhhCCC-ceEEEECCCCCCCCCcchHHHHHHHHHHHhcC
Confidence 999999999999999999999999 8999999999998765 589999999999864
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=237.21 Aligned_cols=253 Identities=14% Similarity=0.224 Sum_probs=175.2
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|...|++ |+||++||++++...|..+++.| +||+|+++|+||||.|.... ....++ ++++++|+.++++.++
T Consensus 249 ~l~~~~~g~~-p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~-~~~~~~-~~~~~~d~~~~~~~l~ 325 (555)
T 3i28_A 249 RLHFVELGSG-PAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPP-EIEEYC-MEVLCKEMVTFLDKLG 325 (555)
T ss_dssp EEEEEEECSS-SEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCS-CGGGGS-HHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCC-CEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-Cccccc-HHHHHHHHHHHHHHcC
Confidence 6788888855 79999999999999999999999 78999999999999997642 224554 9999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCC----CccHHHHHHH-------HHHHHhhhhhhh
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG----GFEEAEIDKV-------FRAMEANYEAWA 153 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~----~~~~~~~~~~-------~~~~~~~~~~~~ 153 (264)
.++++++||||||.+|+.+|.++|++++++|+++++........... .......... ..........+.
T Consensus 326 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (555)
T 3i28_A 326 LSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTF 405 (555)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHH
T ss_pred CCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHH
Confidence 99999999999999999999999999999999998643322111000 0000000000 000001111111
Q ss_pred hhcccc--------------------------cCCCCChHHHHHHHHhhcccCchhhhhhhhhh---cCCccccccCCcc
Q 024681 154 YGYAPL--------------------------AVGADVPAAVREFSRTLFNMRPDISLFVSKTV---FDTDLRGILGLVR 204 (264)
Q Consensus 154 ~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~ 204 (264)
...... ............+...+..........+.... ...+....+.+++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 485 (555)
T 3i28_A 406 KSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKIL 485 (555)
T ss_dssp HHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCC
T ss_pred HHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHHHhccccchhhccccccccc
Confidence 111000 00011122333333333332221111111111 1123445567899
Q ss_pred cCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 205 VPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 205 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+|+|+++|++|.++|.+..+.+.+.+++ +++++++++||+++.++|+++.+.|.+||+
T Consensus 486 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 543 (555)
T 3i28_A 486 IPALMVTAEKDFVLVPQMSQHMEDWIPH-LKRGHIEDCGHWTQMDKPTEVNQILIKWLD 543 (555)
T ss_dssp SCEEEEEETTCSSSCGGGGTTGGGTCTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCCcCHHHHHHHHhhCCC-ceEEEeCCCCCCcchhCHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 899999999999999999999999999986
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=220.69 Aligned_cols=256 Identities=13% Similarity=0.171 Sum_probs=171.3
Q ss_pred eeEEEEeCCC----CceEEEecCCCCChhh---------HHHhhh---hc--CCceEEEecCCC-CCCCCCCCC-CC---
Q 024681 7 ALHVRVVGTG----DRILVLAHGFGTDQSA---------WQRILP---YL--NHHRVIMFDLVC-AGSVNPDYF-DF--- 63 (264)
Q Consensus 7 ~~~~~~~g~~----~p~vv~~hG~~~~~~~---------~~~~~~---~l--~g~~v~~~d~~g-~G~s~~~~~-~~--- 63 (264)
+++|...|+. .|+|||+||++++... |..++. .| ++|+|+++|+|| +|.|+.+.. ++
T Consensus 45 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g 124 (377)
T 2b61_A 45 NVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTG 124 (377)
T ss_dssp EEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTS
T ss_pred eEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCcccc
Confidence 6888888872 5899999999999998 999986 47 899999999999 688754311 00
Q ss_pred -------cccchHHHHHHHHHHHHHHhCCCeEE-EEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC--------
Q 024681 64 -------RRYTTLDAYVDDLLNILDTLGVNRCA-YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE-------- 127 (264)
Q Consensus 64 -------~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-------- 127 (264)
..|+ ++++++|+.++++.++.++++ |+||||||.+|+.+|.++|++|+++|++++........
T Consensus 125 ~~~~~~~~~~~-~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 203 (377)
T 2b61_A 125 KPYGSQFPNIV-VQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMR 203 (377)
T ss_dssp SBCGGGCCCCC-HHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHH
T ss_pred ccccccCCccc-HHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhHHHHHH
Confidence 0344 999999999999999999998 99999999999999999999999999999864321000
Q ss_pred -------CCC------CCccHHHH--HHHHHHHH-hhhhhhhhhcccccCCC----CChHHHHHHHH-----hhcccCch
Q 024681 128 -------DYH------GGFEEAEI--DKVFRAME-ANYEAWAYGYAPLAVGA----DVPAAVREFSR-----TLFNMRPD 182 (264)
Q Consensus 128 -------~~~------~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~~ 182 (264)
.+. .......+ ........ .....+...+....... ........+.. ......+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
T 2b61_A 204 QAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDAN 283 (377)
T ss_dssp HHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhhccccChh
Confidence 000 00000000 00000000 00011111111111110 00011222221 11122222
Q ss_pred hhhhhhhhhcC-------CccccccCCcccCEEEEecCCCCCcch----hhHHHHHHHcCCCceEEEec-CCCCcccccC
Q 024681 183 ISLFVSKTVFD-------TDLRGILGLVRVPCVIIQTSKDVSVPV----SVAEYLQRHLGGRNTVELLK-IEGHLPHLSA 250 (264)
Q Consensus 183 ~~~~~~~~~~~-------~~~~~~~~~i~~P~l~i~g~~D~~~~~----~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~ 250 (264)
........+.. .+....+.++++|+|+|+|++|.++|+ +..+.+.+.+++ +++++++ ++||+++.++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~-~~~~~i~~~~gH~~~~e~ 362 (377)
T 2b61_A 284 SYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVD-LHFYEFPSDYGHDAFLVD 362 (377)
T ss_dssp HHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCE-EEEEEECCTTGGGHHHHC
T ss_pred HHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCC-ceEEEeCCCCCchhhhcC
Confidence 22222222211 223566788999999999999999999 888999999998 8999999 9999999999
Q ss_pred hhcHHHHHHHHhcC
Q 024681 251 PAIVGPVIRRALSR 264 (264)
Q Consensus 251 ~~~~~~~i~~fl~~ 264 (264)
|+++.+.|.+||++
T Consensus 363 p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 363 YDQFEKRIRDGLAG 376 (377)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999974
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=217.77 Aligned_cols=244 Identities=18% Similarity=0.201 Sum_probs=159.3
Q ss_pred eeEEEEeC---CCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVG---TGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g---~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
+++|...+ +++|+||++||++++...|..+++.| .||+|+++|+||+|.|.... ...+ +++++++|+.++++
T Consensus 29 ~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~~~-~~~~~~~d~~~~l~ 105 (303)
T 3pe6_A 29 YLFCRYWAPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGER--MVVS-DFHVFVRDVLQHVD 105 (303)
T ss_dssp EEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSST--TCCS-STHHHHHHHHHHHH
T ss_pred EEEEEEeccCCCCCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCC--CCCC-CHHHHHHHHHHHHH
Confidence 45665554 34679999999999999999999999 69999999999999997542 1223 47888899988888
Q ss_pred HhC----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 82 TLG----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 82 ~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
.+. .++++++|||+||.+++.+|.++|++++++|++++..... .......................
T Consensus 106 ~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 175 (303)
T 3pe6_A 106 SMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLAN----------PESATTFKVLAAKVLNSVLPNLS 175 (303)
T ss_dssp HHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBC----------HHHHHHHHHHHHHHHHTTCCSCC
T ss_pred HHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCc----------hhccHHHHHHHHHHHHHhccccc
Confidence 764 3499999999999999999999999999999999864321 11111111111111111110000
Q ss_pred ----cccCCCCChHHHHHHHHhhcccCchhhhhhhh--hhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 158 ----PLAVGADVPAAVREFSRTLFNMRPDISLFVSK--TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 158 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
..............+................. .....+....+.++++|+++++|++|.+++.+..+.+.+.++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 255 (303)
T 3pe6_A 176 SGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAK 255 (303)
T ss_dssp CCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHCC
T ss_pred CCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhcc
Confidence 00001111112222221111111100000000 001123335567889999999999999999999999999998
Q ss_pred CC-ceEEEecCCCCcccccChhcHHHH---HHHHhc
Q 024681 232 GR-NTVELLKIEGHLPHLSAPAIVGPV---IRRALS 263 (264)
Q Consensus 232 ~~-~~~~~~~~~gH~~~~~~~~~~~~~---i~~fl~ 263 (264)
+. +++++++++||+++.++|+++.+. +.+||+
T Consensus 256 ~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~ 291 (303)
T 3pe6_A 256 SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVS 291 (303)
T ss_dssp CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEeCCCccceeccchHHHHHHHHHHHHHHh
Confidence 32 899999999999999999766555 555543
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=219.66 Aligned_cols=247 Identities=19% Similarity=0.236 Sum_probs=160.1
Q ss_pred eeEEEEe---CCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVV---GTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~---g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.++|... ++++|+||++||++++...|..+++.| +||+|+++|+||+|.|.... ...+ +++++++|+.++++
T Consensus 47 ~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~-~~~~~~~d~~~~l~ 123 (342)
T 3hju_A 47 YLFCRYWKPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGER--MVVS-DFHVFVRDVLQHVD 123 (342)
T ss_dssp EEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSST--TCCS-CTHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCCCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcC--CCcC-cHHHHHHHHHHHHH
Confidence 4555554 345678999999999999999999999 59999999999999997542 1223 47888899988888
Q ss_pred HhCC----CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 82 TLGV----NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 82 ~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
.+.. ++++|+|||+||.+++.+|.++|++|+++|++++......... .............. .........
T Consensus 124 ~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~ 197 (342)
T 3hju_A 124 SMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESA---TTFKVLAAKVLNLV---LPNLSLGPI 197 (342)
T ss_dssp HHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTT---SHHHHHHHHHHHHH---CTTCBCCCC
T ss_pred HHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhh---hHHHHHHHHHHHHh---ccccccCcc
Confidence 7743 4999999999999999999999999999999998644322110 00111111111110 000000000
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhhhh--cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-c
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTV--FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-N 234 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~ 234 (264)
..............+..............+.... ...+....+.++++|+|+++|++|.+++.+..+.+.+.+++. +
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~ 277 (342)
T 3hju_A 198 DSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDK 277 (342)
T ss_dssp CGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSE
T ss_pred cccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcCCCCc
Confidence 0011111112222222111111111000000000 012333557788999999999999999999999999999832 8
Q ss_pred eEEEecCCCCcccccChhcHHHH---HHHHh
Q 024681 235 TVELLKIEGHLPHLSAPAIVGPV---IRRAL 262 (264)
Q Consensus 235 ~~~~~~~~gH~~~~~~~~~~~~~---i~~fl 262 (264)
++++++++||+++.++|+++.+. +.+||
T Consensus 278 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l 308 (342)
T 3hju_A 278 TLKIYEGAYHVLHKELPEVTNSVFHEINMWV 308 (342)
T ss_dssp EEEEETTCCSCGGGSCHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCchhhcCChHHHHHHHHHHHHHH
Confidence 99999999999999999766555 55554
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-34 Score=214.99 Aligned_cols=239 Identities=15% Similarity=0.180 Sum_probs=150.5
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-C--CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-N--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
..++|...|.++|+|||+||++++...|..+++.| + +|+|+++|+||||.|+... ...|+ ++++++|+.++++.
T Consensus 27 ~~~~~~~~g~~~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~--~~~~~-~~~~a~dl~~~l~~ 103 (316)
T 3c5v_A 27 DTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKN--PEDLS-AETMAKDVGNVVEA 103 (316)
T ss_dssp EEEEEEEECSSSCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCSC--TTCCC-HHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCCC--ccccC-HHHHHHHHHHHHHH
Confidence 35778888866689999999999999999999999 8 9999999999999997531 23454 99999999999999
Q ss_pred h--CC-CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh------hhh
Q 024681 83 L--GV-NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN------YEA 151 (264)
Q Consensus 83 ~--~~-~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 151 (264)
+ +. ++++|+||||||.+|+.+|.+ +|+ |+++|++++.... ............... ...
T Consensus 104 l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 172 (316)
T 3c5v_A 104 MYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGT----------AMDALNSMQNFLRGRPKTFKSLEN 172 (316)
T ss_dssp HHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHH----------HHHHHHHHHHHHHHSCSCBSSHHH
T ss_pred HhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccc----------hhhhHHHHHHHHhhCccccccHHH
Confidence 9 66 789999999999999999996 576 9999999874210 000000000000000 000
Q ss_pred hhhhcccccCCCCChHHHHHHHHhhccc-------------------CchhhhhhhhhhcCCccccccCCcccCEEEEec
Q 024681 152 WAYGYAPLAVGADVPAAVREFSRTLFNM-------------------RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQT 212 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 212 (264)
............................ ............ .......+.++++|+|+|+|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~Lli~g 251 (316)
T 3c5v_A 173 AIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGW-FRGLSNLFLSCPIPKLLLLA 251 (316)
T ss_dssp HHHHHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHH-HTTHHHHHHHSSSCEEEEES
T ss_pred HHHHhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhh-hhhhHHHhhcCCCCEEEEEe
Confidence 0000000000000000000000000000 000000000000 00111223468999999999
Q ss_pred CCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 213 SKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 213 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
++|.+.+... .....++ .++++++++||+++.|+|+++++.|.+||+
T Consensus 252 ~~D~~~~~~~---~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 298 (316)
T 3c5v_A 252 GVDRLDKDLT---IGQMQGK-FQMQVLPQCGHAVHEDAPDKVAEAVATFLI 298 (316)
T ss_dssp SCCCCCHHHH---HHHHTTC-SEEEECCCCSSCHHHHSHHHHHHHHHHHHH
T ss_pred cccccccHHH---HHhhCCc-eeEEEcCCCCCcccccCHHHHHHHHHHHHH
Confidence 9998754322 2233455 799999999999999999999999999985
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-34 Score=214.37 Aligned_cols=251 Identities=16% Similarity=0.172 Sum_probs=151.2
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
..++|...|+ +.|+|||+||++++.. +..+...+ ++|+|+++|+||||.|++.. ....++ ++++++|+.++++.
T Consensus 22 ~~l~y~~~G~~~g~pvvllHG~~~~~~-~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~-~~~~~~-~~~~~~dl~~l~~~ 98 (313)
T 1azw_A 22 HTLYFEQCGNPHGKPVVMLHGGPGGGC-NDKMRRFHDPAKYRIVLFDQRGSGRSTPHA-DLVDNT-TWDLVADIERLRTH 98 (313)
T ss_dssp CEEEEEEEECTTSEEEEEECSTTTTCC-CGGGGGGSCTTTEEEEEECCTTSTTSBSTT-CCTTCC-HHHHHHHHHHHHHH
T ss_pred CEEEEEecCCCCCCeEEEECCCCCccc-cHHHHHhcCcCcceEEEECCCCCcCCCCCc-cccccc-HHHHHHHHHHHHHH
Confidence 3678888886 4578999999876543 23344455 69999999999999997532 123454 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHH-HHHHHHHHHHhhhh-----hhhhhc
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEA-EIDKVFRAMEANYE-----AWAYGY 156 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~ 156 (264)
++.++++|+||||||.+|+.+|.++|++|+++|++++.........+....... .............. .....+
T Consensus 99 l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (313)
T 1azw_A 99 LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAF 178 (313)
T ss_dssp TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHHTSCGGGTTSHHHHH
T ss_pred hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCchhhhHHHHhhhhhhhchHHHHHHhhccCchhhhhhhhhh
Confidence 999999999999999999999999999999999998743210000000000000 00000000000000 000000
Q ss_pred ccccCCCCChHHH----HH---HHHhhcccCch----------hhh-h---h-----h-hhhc--CCccccccCCcc-cC
Q 024681 157 APLAVGADVPAAV----RE---FSRTLFNMRPD----------ISL-F---V-----S-KTVF--DTDLRGILGLVR-VP 206 (264)
Q Consensus 157 ~~~~~~~~~~~~~----~~---~~~~~~~~~~~----------~~~-~---~-----~-~~~~--~~~~~~~~~~i~-~P 206 (264)
........ .... .. +........+. ... . . . ..+. ..+....+.+++ +|
T Consensus 179 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P 257 (313)
T 1azw_A 179 HRRLTSDD-EATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIP 257 (313)
T ss_dssp HHHHTCSC-HHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTCC
T ss_pred hhhccccC-cchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhhcccccccccchhhhhcccccCCC
Confidence 00000100 1000 00 00000000000 000 0 0 0 0011 112234456675 99
Q ss_pred EEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccccc-ChhcHHHHHHHH
Q 024681 207 CVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS-APAIVGPVIRRA 261 (264)
Q Consensus 207 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~f 261 (264)
+|+|+|++|.++|++..+.+++.+++ +++++++++||+++.+ .++++.+.|.+|
T Consensus 258 ~Lii~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~gH~~~~~~~~~~~~~~i~~f 312 (313)
T 1azw_A 258 GVIVHGRYDVVCPLQSAWDLHKAWPK-AQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHCTT-SEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCcCCHHHHHHHHhhCCC-cEEEEeCCCCCCcCCCccHHHHHHHHhhc
Confidence 99999999999999999999999999 8999999999987542 346666666666
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=211.51 Aligned_cols=226 Identities=18% Similarity=0.165 Sum_probs=162.3
Q ss_pred CCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEec
Q 024681 15 TGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGH 93 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 93 (264)
+++|+|||+||++++...|..+++.| ++|+|+++|+||+|.|... ...+ +++++++++.++++.++.++++|+||
T Consensus 18 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~---~~~~-~~~~~~~~~~~~l~~~~~~~~~lvG~ 93 (267)
T 3fla_A 18 DARARLVCLPHAGGSASFFFPLAKALAPAVEVLAVQYPGRQDRRHE---PPVD-SIGGLTNRLLEVLRPFGDRPLALFGH 93 (267)
T ss_dssp TCSEEEEEECCTTCCGGGGHHHHHHHTTTEEEEEECCTTSGGGTTS---CCCC-SHHHHHHHHHHHTGGGTTSCEEEEEE
T ss_pred CCCceEEEeCCCCCCchhHHHHHHHhccCcEEEEecCCCCCCCCCC---CCCc-CHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 45689999999999999999999999 8899999999999999753 2334 59999999999999999899999999
Q ss_pred ChhHHHHHHHHHhCCCc----cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHH
Q 024681 94 SVSAMIGLLASIRRPDL----FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAV 169 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p~~----v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
|+||.+|+.+|.++|++ +++++++++..................+................ .....
T Consensus 94 S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 163 (267)
T 3fla_A 94 SMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLA----------DPELL 163 (267)
T ss_dssp THHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHH----------SHHHH
T ss_pred ChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhcc----------CHHHH
Confidence 99999999999999986 99999999865443333333333332222222211110000000 00011
Q ss_pred HHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccccc
Q 024681 170 REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS 249 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 249 (264)
......+. .............. ..+++|+++++|++|.++|.+..+.+.+.+++.++++++++ ||+++.+
T Consensus 164 ~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~ 233 (267)
T 3fla_A 164 AMVLPAIR--------SDYRAVETYRHEPG-RRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLPG-GHFFLVD 233 (267)
T ss_dssp HHHHHHHH--------HHHHHHHHCCCCTT-CCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEESS-STTHHHH
T ss_pred HHHHHHHH--------HHHHhhhccccccc-CcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEecC-Cceeecc
Confidence 11111100 00011111111111 67899999999999999999999999999987679999997 9999999
Q ss_pred ChhcHHHHHHHHhcC
Q 024681 250 APAIVGPVIRRALSR 264 (264)
Q Consensus 250 ~~~~~~~~i~~fl~~ 264 (264)
+|+++.+.|.+||++
T Consensus 234 ~~~~~~~~i~~fl~~ 248 (267)
T 3fla_A 234 QAAPMIATMTEKLAG 248 (267)
T ss_dssp THHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHhcc
Confidence 999999999999964
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=214.64 Aligned_cols=223 Identities=18% Similarity=0.213 Sum_probs=161.2
Q ss_pred eeEEEEeC---CCCceEEEecCCCCC--hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHH
Q 024681 7 ALHVRVVG---TGDRILVLAHGFGTD--QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 7 ~~~~~~~g---~~~p~vv~~hG~~~~--~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~ 79 (264)
+++|...+ ++.|+||++||++++ ...|..+++.| .||.|+++|+||+|.|... ...+ ++.++++|+.++
T Consensus 33 ~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~---~~~~-~~~~~~~d~~~~ 108 (270)
T 3pfb_A 33 QLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGK---FENM-TVLNEIEDANAI 108 (270)
T ss_dssp EEEEEEEECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSC---GGGC-CHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCC---CCcc-CHHHHHHhHHHH
Confidence 34555444 345799999999988 66789999999 8999999999999999763 2344 488999999999
Q ss_pred HHHh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhh
Q 024681 80 LDTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG 155 (264)
Q Consensus 80 ~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
++.+ +.++++++|||+||.+++.+|.++|++++++|++++...... ......... ..
T Consensus 109 i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-----------------~~~~~~~~~--~~ 169 (270)
T 3pfb_A 109 LNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKG-----------------DALEGNTQG--VT 169 (270)
T ss_dssp HHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHH-----------------HHHHTEETT--EE
T ss_pred HHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccch-----------------hhhhhhhhc--cc
Confidence 9988 667999999999999999999999999999999998632100 000000000 00
Q ss_pred cccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCce
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT 235 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 235 (264)
+........ ...................+....+.++++|+++++|++|.++|.+..+.+.+.+++ ++
T Consensus 170 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~ 237 (270)
T 3pfb_A 170 YNPDHIPDR-----------LPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQN-ST 237 (270)
T ss_dssp CCTTSCCSE-----------EEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSS-EE
T ss_pred cCccccccc-----------ccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCCC-Ce
Confidence 000000000 000000001111111222344456778899999999999999999999999999998 89
Q ss_pred EEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 236 VELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++||.++.++++++.+.|.+||++
T Consensus 238 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 266 (270)
T 3pfb_A 238 LHLIEGADHCFSDSYQKNAVNLTTDFLQN 266 (270)
T ss_dssp EEEETTCCTTCCTHHHHHHHHHHHHHHC-
T ss_pred EEEcCCCCcccCccchHHHHHHHHHHHhh
Confidence 99999999999999999999999999974
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=232.23 Aligned_cols=254 Identities=20% Similarity=0.245 Sum_probs=163.7
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCC--CcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFD--FRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+++|...|++ |+||++||++++...|..+++.| +||+|+++|+||||.|..+... ...++ ++++++|+.++++.+
T Consensus 16 ~~~~~~~g~~-p~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~-~~~~~~~l~~~l~~l 93 (304)
T 3b12_A 16 TINCVVGGSG-PALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANYS-FRAMASDQRELMRTL 93 (304)
Confidence 5677777754 78999999999999999999999 9999999999999999764211 23454 899999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHH--------HHHHHH-hhhhhhhh
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDK--------VFRAME-ANYEAWAY 154 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~ 154 (264)
+.++++|+||||||.+++.+|.++|++|+++|++++.+................... ....+. .....+..
T Consensus 94 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (304)
T 3b12_A 94 GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYE 173 (304)
Confidence 999999999999999999999999999999999998654322111100000000000 000000 00000111
Q ss_pred h-cccccCCC---CChHHHHHHHHhhcccC-chhhhhhhhhhcCCccc----cccCCcccCEEEEecCCCC-CcchhhHH
Q 024681 155 G-YAPLAVGA---DVPAAVREFSRTLFNMR-PDISLFVSKTVFDTDLR----GILGLVRVPCVIIQTSKDV-SVPVSVAE 224 (264)
Q Consensus 155 ~-~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~i~~P~l~i~g~~D~-~~~~~~~~ 224 (264)
. +....... ...+....+........ ..............+.. ..+.++++|+|+|+|++|. +.+....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~ 253 (304)
T 3b12_A 174 GCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQV 253 (304)
Confidence 1 00000000 00011111111111000 00111111111111111 2267889999999999995 44667777
Q ss_pred HHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 225 YLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+.+..++ ++++++ ++||+++.++|+++.+.|.+||++
T Consensus 254 ~~~~~~~~-~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~ 291 (304)
T 3b12_A 254 VWAPRLAN-MRFASL-PGGHFFVDRFPDDTARILREFLSD 291 (304)
Confidence 77888887 788888 899999999999999999999964
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=215.43 Aligned_cols=252 Identities=15% Similarity=0.139 Sum_probs=158.2
Q ss_pred eeEEEEeC---CCCceEEEecCCCCChhhHHHhhhhc-C----------CceEEEecCCCCCCCCCCCCCCcccchHHHH
Q 024681 7 ALHVRVVG---TGDRILVLAHGFGTDQSAWQRILPYL-N----------HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAY 72 (264)
Q Consensus 7 ~~~~~~~g---~~~p~vv~~hG~~~~~~~~~~~~~~l-~----------g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 72 (264)
.++|...+ ++.++|||+||++++...|..+++.| . +|+|+++|+||||.|+... ...++ ++++
T Consensus 79 ~i~~~~~~~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~--~~~~~-~~~~ 155 (388)
T 4i19_A 79 TIHFLHVRSPEPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLK--SAGWE-LGRI 155 (388)
T ss_dssp EEEEEEECCSSTTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCS--SCCCC-HHHH
T ss_pred EEEEEEccCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCC--CCCCC-HHHH
Confidence 46676553 34579999999999999999999999 6 9999999999999997652 12454 9999
Q ss_pred HHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHH---HHHHHHH---
Q 024681 73 VDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEID---KVFRAME--- 146 (264)
Q Consensus 73 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--- 146 (264)
++++.++++.++.++++++||||||.+++.+|.++|++|++++++++.............+...... .......
T Consensus 156 a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 235 (388)
T 4i19_A 156 AMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTNLSGEPGELETLSDADKARLAVSERFLDDLS 235 (388)
T ss_dssp HHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCCBCCCGGGGGGCCHHHHHHHHTHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCCCCCcccccccCCHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999754322211111111111110 0000000
Q ss_pred ------hh---------------hhhhh-hhcccccCC-------CCChHHHHHHHHhhcccCchhhhhhhhhhc--CCc
Q 024681 147 ------AN---------------YEAWA-YGYAPLAVG-------ADVPAAVREFSRTLFNMRPDISLFVSKTVF--DTD 195 (264)
Q Consensus 147 ------~~---------------~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 195 (264)
.. ...|. ..+...... -...+........+...........+.... ...
T Consensus 236 ~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~~~d~ll~~~~~y~~t~~~~~s~~~y~e~~~~~~~ 315 (388)
T 4i19_A 236 GPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAVDRDLMLTHISLFWFTATGGSAAQAHYELKPFLPI 315 (388)
T ss_dssp HHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTSCHHHHHHHHHHHHHHTCHHHHHHHHHHTGGGCTT
T ss_pred hHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCCCHHHHHHHHHHHHhcCCchhHHHHHHHhhccccc
Confidence 00 00000 000000000 000011111111111111111111111111 111
Q ss_pred --cccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 196 --LRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 196 --~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
....+..+++|+++++|.+|...++.... ....++.+++.+++++||++++|+|+.+++.|.+|++
T Consensus 316 ~~~~~~~~~i~vP~~v~~g~~D~~~~p~~~~--~~~~~~~~~~~~~~~gGHf~~~E~Pe~~~~~l~~fl~ 383 (388)
T 4i19_A 316 TSLIGRSPTLDVPMGVAVYPGALFQPVRSLA--ERDFKQIVHWAELDRGGHFSAMEEPDLFVDDLRTFNR 383 (388)
T ss_dssp TCCBCCCCCBCSCEEEEECTBCSSCCCHHHH--HHHBTTEEEEEECSSCBSSHHHHCHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCCEEEEeCCcccccccHHHH--HHhCCCeEEEEECCCCcCccchhcHHHHHHHHHHHHH
Confidence 12256778999999999999655543221 2223343678889999999999999999999999986
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-34 Score=220.90 Aligned_cols=255 Identities=18% Similarity=0.190 Sum_probs=167.2
Q ss_pred eeEEEEeCCC----------CceEEEecCCCCChhhHHHhhhhc-C-----Cc---eEEEecCCCCCCCCCCCCC--Ccc
Q 024681 7 ALHVRVVGTG----------DRILVLAHGFGTDQSAWQRILPYL-N-----HH---RVIMFDLVCAGSVNPDYFD--FRR 65 (264)
Q Consensus 7 ~~~~~~~g~~----------~p~vv~~hG~~~~~~~~~~~~~~l-~-----g~---~v~~~d~~g~G~s~~~~~~--~~~ 65 (264)
+++|...|+. +|+|||+||++++...|..+++.| + || +|+++|+||||.|+..... ...
T Consensus 32 ~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 111 (398)
T 2y6u_A 32 ELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTN 111 (398)
T ss_dssp EEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHTTTTBCSC
T ss_pred EEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCCccccCCC
Confidence 5677766541 269999999999999999999988 3 67 9999999999999642111 123
Q ss_pred cchHHHHHHHHHHHHHHhC----CCe--EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC--------CCCCC
Q 024681 66 YTTLDAYVDDLLNILDTLG----VNR--CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND--------EDYHG 131 (264)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~----~~~--~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~--------~~~~~ 131 (264)
+ ++.++++|+.++++.+. .++ ++|+||||||.+++.+|.++|++|+++|++++....... .....
T Consensus 112 ~-~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 190 (398)
T 2y6u_A 112 F-NWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSP 190 (398)
T ss_dssp C-CHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCCCTTCCTTCC
T ss_pred C-CcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccccccccccccccc
Confidence 4 49999999999999754 444 999999999999999999999999999999987543210 00111
Q ss_pred CccHHHHHHHHHHHHh---hhhhhhhhccc-ccCCCCChHHHHHHHHhhcccC---------------chhhhhhhhhh-
Q 024681 132 GFEEAEIDKVFRAMEA---NYEAWAYGYAP-LAVGADVPAAVREFSRTLFNMR---------------PDISLFVSKTV- 191 (264)
Q Consensus 132 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~- 191 (264)
.........+...... ........+.. .......+...+.+........ ...........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (398)
T 2y6u_A 191 QIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQ 270 (398)
T ss_dssp CCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSCHHHHHHTTSCGG
T ss_pred ccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCCchhhhhhhcccc
Confidence 1111111111111000 00000001110 1111122223333322111000 00000000000
Q ss_pred -cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 192 -FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 192 -~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
...+....+.++++|+|+|+|++|.++|++..+.+.+.+++ +++++++++||+++.++|+++.+.|.+||+
T Consensus 271 ~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 342 (398)
T 2y6u_A 271 TFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQN-YHLDVIPGGSHLVNVEAPDLVIERINHHIH 342 (398)
T ss_dssp GTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCSS-EEEEEETTCCTTHHHHSHHHHHHHHHHHHH
T ss_pred cchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCCC-ceEEEeCCCCccchhcCHHHHHHHHHHHHH
Confidence 01123355778899999999999999999999999999998 899999999999999999999999999985
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-33 Score=197.14 Aligned_cols=179 Identities=17% Similarity=0.252 Sum_probs=155.5
Q ss_pred EEEeCCCCceEEEecCCCCChhhHHH--hhhhc--CCceEEEecCCCCCCC---CCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 10 VRVVGTGDRILVLAHGFGTDQSAWQR--ILPYL--NHHRVIMFDLVCAGSV---NPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 10 ~~~~g~~~p~vv~~hG~~~~~~~~~~--~~~~l--~g~~v~~~d~~g~G~s---~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
|...| .+|+||++||++++...|.. +.+.| .||.|+++|+||+|.| ... ...+.+.++.++++..+++.
T Consensus 21 ~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~---~~~~~~~~~~~~~~~~~~~~ 96 (207)
T 3bdi_A 21 MVTDS-NRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKY---GIDRGDLKHAAEFIRDYLKA 96 (207)
T ss_dssp ECCTT-CCEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTT---CCTTCCHHHHHHHHHHHHHH
T ss_pred EeccC-CCCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcccCC---CCCcchHHHHHHHHHHHHHH
Confidence 66666 45799999999999999999 99999 7899999999999999 543 34452489999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
++.++++++|||+||.+++.++.++|+++++++++++..... +
T Consensus 97 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----~--------------------------------- 139 (207)
T 3bdi_A 97 NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES----L--------------------------------- 139 (207)
T ss_dssp TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG----G---------------------------------
T ss_pred cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc----h---------------------------------
Confidence 999999999999999999999999999999999999852210 0
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCC
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (264)
...+.++++|+++++|++|.+++.+..+.+.+.+++ +++.+++++
T Consensus 140 ----------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~ 184 (207)
T 3bdi_A 140 ----------------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIISG-SRLEIVEGS 184 (207)
T ss_dssp ----------------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHSTT-CEEEEETTC
T ss_pred ----------------------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcCC-ceEEEeCCC
Confidence 122455689999999999999999999999999988 899999999
Q ss_pred CCcccccChhcHHHHHHHHhcC
Q 024681 243 GHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 243 gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
||..+.++++++.+.|.+||++
T Consensus 185 ~H~~~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 185 GHPVYIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp CSCHHHHSHHHHHHHHHHHHHT
T ss_pred CCCccccCHHHHHHHHHHHHhh
Confidence 9999999999999999999974
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=211.41 Aligned_cols=223 Identities=16% Similarity=0.138 Sum_probs=141.9
Q ss_pred eeEEEEeCC------CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCC-CCCCCCCCCCcccchHHHHHHHHH
Q 024681 7 ALHVRVVGT------GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCA-GSVNPDYFDFRRYTTLDAYVDDLL 77 (264)
Q Consensus 7 ~~~~~~~g~------~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~~~ 77 (264)
.++|...++ .+|+||++||++++...|..+++.| .||+|+++|+||| |.|+.. ...|+ ++++++|+.
T Consensus 19 ~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~---~~~~~-~~~~~~D~~ 94 (305)
T 1tht_A 19 ELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGS---IDEFT-MTTGKNSLC 94 (305)
T ss_dssp EEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC-----------CCC-HHHHHHHHH
T ss_pred EEEEEEecCcccCCCCCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCc---cccee-hHHHHHHHH
Confidence 566666553 3579999999999999999999999 6899999999999 999753 23454 888999988
Q ss_pred HHHHHh---CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhh-hhh
Q 024681 78 NILDTL---GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYE-AWA 153 (264)
Q Consensus 78 ~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 153 (264)
++++.+ +.++++|+||||||.+|+.+|.+ | +++++|++++.... ...... ....... ...
T Consensus 95 ~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~-----------~~~~~~---~~~~~~~~~~~ 158 (305)
T 1tht_A 95 TVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNL-----------RDTLEK---ALGFDYLSLPI 158 (305)
T ss_dssp HHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCH-----------HHHHHH---HHSSCGGGSCG
T ss_pred HHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhH-----------HHHHHH---Hhhhhhhhcch
Confidence 888765 77899999999999999999998 7 89999998764210 000000 0000000 000
Q ss_pred hhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC-
Q 024681 154 YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG- 232 (264)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 232 (264)
..................+.......... ...+....+.++++|+|+++|++|.++|++.++.+++.++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~ 229 (305)
T 1tht_A 159 DELPNDLDFEGHKLGSEVFVRDCFEHHWD---------TLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTG 229 (305)
T ss_dssp GGCCSEEEETTEEEEHHHHHHHHHHTTCS---------SHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTC
T ss_pred hhCcccccccccccCHHHHHHHHHhcccc---------chhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCC
Confidence 00000000000000000111000000000 00012345778999999999999999999999999998852
Q ss_pred CceEEEecCCCCcccccChhcHHHHHH
Q 024681 233 RNTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
.+++++++++||.++ ++|+.+.+.+.
T Consensus 230 ~~~l~~i~~agH~~~-e~p~~~~~fl~ 255 (305)
T 1tht_A 230 HCKLYSLLGSSHDLG-ENLVVLRNFYQ 255 (305)
T ss_dssp CEEEEEETTCCSCTT-SSHHHHHHHHH
T ss_pred CcEEEEeCCCCCchh-hCchHHHHHHH
Confidence 179999999999986 88875544443
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=202.47 Aligned_cols=230 Identities=17% Similarity=0.163 Sum_probs=160.2
Q ss_pred eeEEEEeCCC---CceEEEecCCCCChhhH--HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHH
Q 024681 7 ALHVRVVGTG---DRILVLAHGFGTDQSAW--QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 7 ~~~~~~~g~~---~p~vv~~hG~~~~~~~~--~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~ 79 (264)
+++|...... +|+||++||++++...| ..+...| .||+|+++|+||+|.|... ...+ +++++++|+.++
T Consensus 24 ~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~---~~~~-~~~~~~~d~~~~ 99 (270)
T 3llc_A 24 SIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGA---FRDG-TISRWLEEALAV 99 (270)
T ss_dssp EEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSC---GGGC-CHHHHHHHHHHH
T ss_pred eEEEEeccCCCCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCc---cccc-cHHHHHHHHHHH
Confidence 4677744433 78999999999986554 4467777 7999999999999999754 2344 499999999999
Q ss_pred HHHhCCCeEEEEecChhHHHHHHHHHh---CC---CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh
Q 024681 80 LDTLGVNRCAYVGHSVSAMIGLLASIR---RP---DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA 153 (264)
Q Consensus 80 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~---~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
++.++.++++++|||+||.+|+.+|.+ +| ++++++|++++.........+ ..+.......+. ...
T Consensus 100 ~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~ 170 (270)
T 3llc_A 100 LDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIE-PLLGDRERAELA--------ENG 170 (270)
T ss_dssp HHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTG-GGCCHHHHHHHH--------HHS
T ss_pred HHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhh-hhhhhhhhhhhh--------ccC
Confidence 999999999999999999999999999 99 999999999986542111000 000000000000 000
Q ss_pred hhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC
Q 024681 154 YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233 (264)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 233 (264)
.......+... ...............+....+.++++|+++++|++|.++|.+..+.+.+.+++.
T Consensus 171 ~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~ 235 (270)
T 3llc_A 171 YFEEVSEYSPE---------------PNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPAD 235 (270)
T ss_dssp EEEECCTTCSS---------------CEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCSS
T ss_pred cccChhhcccc---------------hhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCC
Confidence 00000000000 001111111112222334567788999999999999999999999999998864
Q ss_pred -ceEEEecCCCCccc-ccChhcHHHHHHHHhcC
Q 024681 234 -NTVELLKIEGHLPH-LSAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 -~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||++. .+.++++.+.|.+||++
T Consensus 236 ~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 236 DVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp SEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred CeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 78999999999655 46789999999999974
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=212.88 Aligned_cols=244 Identities=16% Similarity=0.139 Sum_probs=154.3
Q ss_pred CCceEEEecCCCCChhhHHHhhh------hc--CCceEEEecCCCCCCCCCCC---CCCc---ccchHHHHHH-HHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP------YL--NHHRVIMFDLVCAGSVNPDY---FDFR---RYTTLDAYVD-DLLNIL 80 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~------~l--~g~~v~~~d~~g~G~s~~~~---~~~~---~~~~~~~~~~-~~~~~~ 80 (264)
++|+||++||++++...|..+.. .| .||+|+++|+||||.|.... .... .++ ++++++ |+.+++
T Consensus 57 ~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~i 135 (377)
T 1k8q_A 57 RRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFS-FDEMAKYDLPATI 135 (377)
T ss_dssp TCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCC-HHHHHHTHHHHHH
T ss_pred CCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCCCCCCCCCcccccCcc-HHHHHhhhHHHHH
Confidence 45799999999999999987766 77 78999999999999997521 0111 454 888888 877765
Q ss_pred H----HhCCCeEEEEecChhHHHHHHHHHhCCC---ccceeEEecCCCCCCCCCCCCCCcc------------------H
Q 024681 81 D----TLGVNRCAYVGHSVSAMIGLLASIRRPD---LFTKLILIGASPRFLNDEDYHGGFE------------------E 135 (264)
Q Consensus 81 ~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~~~~------------------~ 135 (264)
+ .++.++++++||||||.+++.+|.++|+ +|+++|++++............... .
T Consensus 136 ~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (377)
T 1k8q_A 136 DFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPH 215 (377)
T ss_dssp HHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCC
T ss_pred HHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcH
Confidence 5 5688899999999999999999999998 8999999998654322111110000 0
Q ss_pred -HHHHHHHHHH---------HhhhhhhhhhcccccCCCCChHHHHHHHHhhcccC-chhhhh------------------
Q 024681 136 -AEIDKVFRAM---------EANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMR-PDISLF------------------ 186 (264)
Q Consensus 136 -~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------ 186 (264)
.....+.... ................ .......+........ ......
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 1k8q_A 216 HFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNL---NMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSP 292 (377)
T ss_dssp CHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGS---CGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSH
T ss_pred HHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccC---CHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcc
Confidence 0000000000 0000000000000000 0011111111000000 000000
Q ss_pred ---hhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCce-EEEecCCCCcccc---cChhcHHHHHH
Q 024681 187 ---VSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT-VELLKIEGHLPHL---SAPAIVGPVIR 259 (264)
Q Consensus 187 ---~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~---~~~~~~~~~i~ 259 (264)
.............+.++++|+|+++|++|.++|++.++.+.+.+++ .+ +++++++||+.+. ++|+++.+.|.
T Consensus 293 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~ 371 (377)
T 1k8q_A 293 VQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPN-LIYHRKIPPYNHLDFIWAMDAPQAVYNEIV 371 (377)
T ss_dssp HHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTT-EEEEEEETTCCTTHHHHCTTHHHHTHHHHH
T ss_pred hhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCcC-cccEEecCCCCceEEEecCCcHHHHHHHHH
Confidence 0000000111234778899999999999999999999999999998 66 9999999999886 88999999999
Q ss_pred HHhcC
Q 024681 260 RALSR 264 (264)
Q Consensus 260 ~fl~~ 264 (264)
+||++
T Consensus 372 ~fl~~ 376 (377)
T 1k8q_A 372 SMMGT 376 (377)
T ss_dssp HHHHT
T ss_pred HHhcc
Confidence 99974
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=208.39 Aligned_cols=221 Identities=14% Similarity=0.058 Sum_probs=152.6
Q ss_pred ceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-CCCeEEEEecCh
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-GVNRCAYVGHSV 95 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~ 95 (264)
|+|||+||++++...|..+++.| .+|+|+++|+||||.|... ...+ +++++++++.++++.+ +.++++|+||||
T Consensus 52 ~~lvllHG~~~~~~~~~~l~~~L~~~~~v~~~D~~G~G~S~~~---~~~~-~~~~~a~~~~~~l~~~~~~~~~~lvG~S~ 127 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRE---RPYD-TMEPLAEAVADALEEHRLTHDYALFGHSM 127 (280)
T ss_dssp EEEEEECCTTCCGGGGTTHHHHHCTTEEEEECCCTTSGGGTTS---CCCC-SHHHHHHHHHHHHHHTTCSSSEEEEEETH
T ss_pred ceEEEECCCCCChHHHHHHHHhcCCCceEEEEeCCCCCCCCCC---CCCC-CHHHHHHHHHHHHHHhCCCCCEEEEEeCH
Confidence 78999999999999999999999 9999999999999999653 2334 5999999999999999 778999999999
Q ss_pred hHHHHHHHHHhCCCccc----eeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 96 SAMIGLLASIRRPDLFT----KLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 96 Gg~~a~~~a~~~p~~v~----~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
||.+|+.+|.++|+++. .++++++..................+............... ........ ...
T Consensus 128 Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~- 200 (280)
T 3qmv_A 128 GALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADT---LGAAYFDR---RLP- 200 (280)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC------------CCT---THH-
T ss_pred hHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhh---cCHHHHHH---HHH-
Confidence 99999999999998877 78877765433222211111222222211111110000000 00000000 000
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc--c
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL--S 249 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~ 249 (264)
............. ...+.++++|+++++|++|.+++.+..+.+.+.+++..++++++ +||+.+. +
T Consensus 201 -----------~~~~~~~~~~~~~-~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-ggH~~~~~~~ 267 (280)
T 3qmv_A 201 -----------VLRADLRACERYD-WHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLP-GNHFFLNGGP 267 (280)
T ss_dssp -----------HHHHHHHHHHTCC-CCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEE-EETTGGGSSH
T ss_pred -----------HHHHHHHHHHhcc-ccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEec-CCCeEEcCch
Confidence 0000111111111 12256789999999999999999999999999988745777777 6999999 8
Q ss_pred ChhcHHHHHHHHh
Q 024681 250 APAIVGPVIRRAL 262 (264)
Q Consensus 250 ~~~~~~~~i~~fl 262 (264)
+|+++.+.|.+||
T Consensus 268 ~~~~~~~~i~~~L 280 (280)
T 3qmv_A 268 SRDRLLAHLGTEL 280 (280)
T ss_dssp HHHHHHHHHHTTC
T ss_pred hHHHHHHHHHhhC
Confidence 8999999999886
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=208.10 Aligned_cols=222 Identities=15% Similarity=0.168 Sum_probs=155.3
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC--CCeEEEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG--VNRCAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~ 91 (264)
++|+||++||++++...|..+++.| .||+|+++|+||+|.|... ...+ +++++++|+.++++.+. .++++++
T Consensus 39 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~---~~~~-~~~~~~~d~~~~i~~l~~~~~~i~l~ 114 (270)
T 3rm3_A 39 GPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYED---MERT-TFHDWVASVEEGYGWLKQRCQTIFVT 114 (270)
T ss_dssp SSEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHH---HHTC-CHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCccc---cccC-CHHHHHHHHHHHHHHHHhhCCcEEEE
Confidence 4489999999999999999999999 7999999999999999642 1233 48999999999999997 7899999
Q ss_pred ecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 92 GHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
|||+||.+++.+|.++|+ ++++|+++++..... ........ .....+...+...........
T Consensus 115 G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---- 176 (270)
T 3rm3_A 115 GLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPA------------IAAGMTGG-GELPRYLDSIGSDLKNPDVKE---- 176 (270)
T ss_dssp EETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHH------------HHHHSCC----CCSEEECCCCCCSCTTCCC----
T ss_pred EEcHhHHHHHHHHHhCCC-ccEEEEEcceecccc------------cccchhcc-hhHHHHHHHhCccccccchHh----
Confidence 999999999999999999 999999998643210 00000000 000111111111100000000
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCCCcccccC
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGHLPHLSA 250 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~ 250 (264)
.................. .+....+.++++|+++++|++|.++|.+..+.+.+.+++. +++++++++||+++.+.
T Consensus 177 --~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 252 (270)
T 3rm3_A 177 --LAYEKTPTASLLQLARLM--AQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDY 252 (270)
T ss_dssp --CCCSEEEHHHHHHHHHHH--HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGST
T ss_pred --hcccccChhHHHHHHHHH--HHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCc
Confidence 000000000000000000 1233456678999999999999999999999999999872 48999999999999998
Q ss_pred h-hcHHHHHHHHhc
Q 024681 251 P-AIVGPVIRRALS 263 (264)
Q Consensus 251 ~-~~~~~~i~~fl~ 263 (264)
+ +++.+.|.+||+
T Consensus 253 ~~~~~~~~i~~fl~ 266 (270)
T 3rm3_A 253 DQPMIIERSLEFFA 266 (270)
T ss_dssp THHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 7 889999999986
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-32 Score=197.97 Aligned_cols=220 Identities=15% Similarity=0.081 Sum_probs=155.3
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC--eEEEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN--RCAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ 91 (264)
++|+||++||++++...|..+++.| +||+|+++|+||+|.|+... .....+++++.+|+.++++.+... +++++
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~d~~~~i~~l~~~~~~~~l~ 98 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLD--ILTKGNPDIWWAESSAAVAHMTAKYAKVFVF 98 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHH--HHHHCCHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhh--hcCcccHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 4579999999999999999999999 89999999999999996431 112213788899999888888654 99999
Q ss_pred ecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 92 GHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
|||+||.+++.+|.++|+++++++++++....... ...........+ ..... . .........
T Consensus 99 G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~-------~~~~~~~~~~~~----~~~~~---~----~~~~~~~~~ 160 (251)
T 3dkr_A 99 GLSLGGIFAMKALETLPGITAGGVFSSPILPGKHH-------LVPGFLKYAEYM----NRLAG---K----SDESTQILA 160 (251)
T ss_dssp ESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBC-------HHHHHHHHHHHH----HHHHT---C----CCCHHHHHH
T ss_pred EechHHHHHHHHHHhCccceeeEEEecchhhccch-------hhHHHHHHHHHH----Hhhcc---c----CcchhhHHh
Confidence 99999999999999999999999998876432110 111111111111 11000 0 001111111
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC--CceEEEecCCCCccccc
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG--RNTVELLKIEGHLPHLS 249 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~ 249 (264)
..... ....... ..+....+.++++|+++++|++|.++|.+..+.+.+.+++ .+++++++++||.++.+
T Consensus 161 ~~~~~-------~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 231 (251)
T 3dkr_A 161 YLPGQ-------LAAIDQF--ATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVN 231 (251)
T ss_dssp HHHHH-------HHHHHHH--HHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTS
T ss_pred hhHHH-------HHHHHHH--HHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCcccccc
Confidence 10000 0000000 0112344667799999999999999999999999999887 37899999999999888
Q ss_pred C-hhcHHHHHHHHhcC
Q 024681 250 A-PAIVGPVIRRALSR 264 (264)
Q Consensus 250 ~-~~~~~~~i~~fl~~ 264 (264)
. ++++.+.|.+||++
T Consensus 232 ~~~~~~~~~i~~fl~~ 247 (251)
T 3dkr_A 232 SAHHALEEDVIAFMQQ 247 (251)
T ss_dssp TTHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHHh
Confidence 5 99999999999974
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=210.62 Aligned_cols=226 Identities=12% Similarity=0.074 Sum_probs=151.8
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--C--CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--N--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
++|+|||+||++++...|..+++.| . ||+|+++|+||||.|..+ ..+ +++++++++.++++.+ .++++++
T Consensus 35 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~----~~~-~~~~~~~~l~~~~~~~-~~~~~lv 108 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRP----LWE-QVQGFREAVVPIMAKA-PQGVHLI 108 (302)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSC----HHH-HHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhh----HHH-HHHHHHHHHHHHhhcC-CCcEEEE
Confidence 3479999999999999999999999 4 799999999999998653 223 4899999999999988 6899999
Q ss_pred ecChhHHHHHHHHHhCCC-ccceeEEecCCCCCCCCCCCCCCccHHHHHHHH----HH-HHh-hhhhhhhhccc-ccCCC
Q 024681 92 GHSVSAMIGLLASIRRPD-LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVF----RA-MEA-NYEAWAYGYAP-LAVGA 163 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~-~~~~~~~~~~~-~~~~~ 163 (264)
||||||.+++.+|.++|+ +|+++|+++++....... . ....... .. ... .+......... ..+..
T Consensus 109 GhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (302)
T 1pja_A 109 CYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGD------T-DYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHD 181 (302)
T ss_dssp EETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSC------C-HHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGGBCC
T ss_pred EECHHHHHHHHHHHhcCccccCEEEEECCCccccccc------c-hhhhhHHHHHHHHHHhhccchHHHHHhhhhhcccC
Confidence 999999999999999999 799999999865322110 0 0000000 00 000 00000000000 00000
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhh----cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC-------
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTV----FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG------- 232 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------- 232 (264)
. .....+... .......... ...++...+.+++ |+++++|++|.++|++.++.+.+..++
T Consensus 182 ~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 1pja_A 182 P--HHDDLYLNA------SSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEME 252 (302)
T ss_dssp T--TCHHHHHHH------CSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGG
T ss_pred h--hhhhhhhcc------chHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchh
Confidence 0 001111110 0000000000 0112355678899 999999999999998887777554432
Q ss_pred -------------------CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 233 -------------------RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 233 -------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+++++++++||+++.|+|+++.+.|.+||+
T Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 302 (302)
T 1pja_A 253 EQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWLS 302 (302)
T ss_dssp GSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGCC
T ss_pred hhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhcC
Confidence 1789999999999999999999999999984
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=195.74 Aligned_cols=181 Identities=20% Similarity=0.203 Sum_probs=150.3
Q ss_pred eeEEEEe----CCCCceEEEecCCCCChhhHHH--hhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHH--HHH
Q 024681 7 ALHVRVV----GTGDRILVLAHGFGTDQSAWQR--ILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYV--DDL 76 (264)
Q Consensus 7 ~~~~~~~----g~~~p~vv~~hG~~~~~~~~~~--~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~--~~~ 76 (264)
+++|... ++.+|+||++||++++...|.. +.+.| +||.|+++|+||+|.|.... ..+ ++++.+ +++
T Consensus 18 ~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~---~~~-~~~~~~~~~~~ 93 (210)
T 1imj_A 18 ALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAA---APA-PIGELAPGSFL 93 (210)
T ss_dssp EECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSC---CSS-CTTSCCCTHHH
T ss_pred EEEEEEeCCCCCCCCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCC---Ccc-hhhhcchHHHH
Confidence 4566654 2356899999999999999998 57888 78999999999999997642 122 245555 889
Q ss_pred HHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 77 LNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
.++++.++.++++++|||+||.+++.+|.++|++++++|++++.....
T Consensus 94 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~-------------------------------- 141 (210)
T 1imj_A 94 AAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK-------------------------------- 141 (210)
T ss_dssp HHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG--------------------------------
T ss_pred HHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc--------------------------------
Confidence 999999999999999999999999999999999999999999853200
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 236 (264)
.....+.++++|+++++|++|. ++.+..+.+ +.+++ +++
T Consensus 142 --------------------------------------~~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~~-~~~ 180 (210)
T 1imj_A 142 --------------------------------------INAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQLPN-HRV 180 (210)
T ss_dssp --------------------------------------SCHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTSSS-EEE
T ss_pred --------------------------------------ccchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhCCC-CCE
Confidence 0011234568999999999999 999999999 88888 899
Q ss_pred EEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 237 ELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
..++++||+++.++|+++.+.|.+||++
T Consensus 181 ~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 181 LIMKGAGHPCYLDKPEEWHTGLLDFLQG 208 (210)
T ss_dssp EEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred EEecCCCcchhhcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999974
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-31 Score=189.92 Aligned_cols=203 Identities=14% Similarity=0.073 Sum_probs=153.2
Q ss_pred eEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCc-------ccchHHHHHHHHHH
Q 024681 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFR-------RYTTLDAYVDDLLN 78 (264)
Q Consensus 8 ~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~-------~~~~~~~~~~~~~~ 78 (264)
..|...+ .+|+||++||++++...|..+++.| .||.|+++|+||+|.|........ ...++++.++|+.+
T Consensus 16 ~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 94 (238)
T 1ufo_A 16 LARIPEA-PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARR 94 (238)
T ss_dssp EEEEESS-CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC-CccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhHHHHHHHHHHHHHH
Confidence 3455555 6689999999999999999999999 789999999999999965322111 01136677888887
Q ss_pred HHHHh---CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhh
Q 024681 79 ILDTL---GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG 155 (264)
Q Consensus 79 ~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
+++.+ +.++++++|||+||.+++.+|.++|+.+.+++++++...........
T Consensus 95 ~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 149 (238)
T 1ufo_A 95 VAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQV------------------------- 149 (238)
T ss_dssp HHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTCC-------------------------
T ss_pred HHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhhhc-------------------------
Confidence 77765 45899999999999999999999999999999888753321111100
Q ss_pred cccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCc-ccCEEEEecCCCCCcchhhHHHHHHHcC---
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLV-RVPCVIIQTSKDVSVPVSVAEYLQRHLG--- 231 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 231 (264)
.. +... ......+....+.++ ++|+++++|++|.++|.+..+.+.+.++
T Consensus 150 -------~~-~~~~-------------------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 202 (238)
T 1ufo_A 150 -------VE-DPGV-------------------LALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHY 202 (238)
T ss_dssp -------CC-CHHH-------------------HHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGC
T ss_pred -------cC-Cccc-------------------chhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcC
Confidence 00 0000 000111223345566 8999999999999999999999999988
Q ss_pred ---CCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 232 ---GRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 232 ---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+ +++++++++||.++.+.++++.+.+.+||++
T Consensus 203 ~~~~-~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 203 PEGR-LARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp TTCC-EEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred CCCc-eEEEEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 6 8999999999999999999999999998863
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=199.99 Aligned_cols=251 Identities=12% Similarity=0.070 Sum_probs=152.3
Q ss_pred eeEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc-C-------CceEEEecCCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 7 ALHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL-N-------HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 7 ~~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l-~-------g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
.|+|...++ +.++|||+||++++...|..+++.| . ||+|+++|+||||.|+.+.. ...++ +++++++
T Consensus 96 ~i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~-~~~~~-~~~~a~~ 173 (408)
T 3g02_A 96 TIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPL-DKDFG-LMDNARV 173 (408)
T ss_dssp EEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCS-SSCCC-HHHHHHH
T ss_pred EEEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCC-CCCCC-HHHHHHH
Confidence 577877764 4579999999999999999999988 4 68999999999999986421 23454 9999999
Q ss_pred HHHHHHHhCCC-eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHH---HHHHHHHh--hh
Q 024681 76 LLNILDTLGVN-RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEID---KVFRAMEA--NY 149 (264)
Q Consensus 76 ~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~ 149 (264)
+.++++.++.+ +++++||||||.+++.+|.++|+.+..++.+.+...... ......+...... ........ .+
T Consensus 174 ~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~-~~~~~~l~~~e~~~~~~~~~~~~~~~~y 252 (408)
T 3g02_A 174 VDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPE-GPSIESLSAAEKEGIARMEKFMTDGYAY 252 (408)
T ss_dssp HHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTT-CCCGGGSCHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCcc-cccccCCCHHHHHHHHHHHHHHHhCcch
Confidence 99999999997 999999999999999999999764444444333222111 1111111111111 11100000 00
Q ss_pred ----------------------hhhh-hhcccccC-CCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccc-------c
Q 024681 150 ----------------------EAWA-YGYAPLAV-GADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLR-------G 198 (264)
Q Consensus 150 ----------------------~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 198 (264)
..|. ..+....- ....++.+......+...........+......... .
T Consensus 253 ~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~ 332 (408)
T 3g02_A 253 AMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYREWVPTASAPNGATPYQ 332 (408)
T ss_dssp HHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTHHHHHGGGHHHHTTC-------CTTT
T ss_pred hhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHHHhhccchhHHHHHHhhcccccccccccccc
Confidence 0000 00000000 000011111111111111111111111111111111 1
Q ss_pred ccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 199 ILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 199 ~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+..+++|+++++|.+|...++.. +.+...+.+.+.+++++||++++|+|+.+++.|.+||+
T Consensus 333 ~l~~i~vPt~v~~~~~D~~~~p~~---~~~~~~~~~~~~~~~~gGHf~~lE~Pe~~~~~l~~fl~ 394 (408)
T 3g02_A 333 KELYIHKPFGFSFFPKDLVPVPRS---WIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVE 394 (408)
T ss_dssp TTTCEEEEEEEEECTBSSSCCCHH---HHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHH
T ss_pred cCCCcCCCEEEEeCCcccccCcHH---HHHhcCCeeEEEECCCCcCchhhhCHHHHHHHHHHHHH
Confidence 456789999999999997766542 33333332778899999999999999999999999985
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=181.89 Aligned_cols=167 Identities=19% Similarity=0.235 Sum_probs=137.8
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCc---eEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHH---RVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAY 90 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~---~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 90 (264)
++|+||++||++++...|..+.+.| .|| +|+++|+||+|.|.. + +.+++++++.++++.++.+++++
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~-------~-~~~~~~~~~~~~~~~~~~~~~~l 73 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY-------N-NGPVLSRFVQKVLDETGAKKVDI 73 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH-------H-HHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCchh-------h-hHHHHHHHHHHHHHHcCCCeEEE
Confidence 3578999999999999999999999 787 799999999998853 2 58899999999999999999999
Q ss_pred EecChhHHHHHHHHHhC--CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHH
Q 024681 91 VGHSVSAMIGLLASIRR--PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAA 168 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
+||||||.+++.++.++ |++++++|+++++...... . .+.
T Consensus 74 vG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~-------------------------------~-~~~------ 115 (181)
T 1isp_A 74 VAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG-------------------------------K-ALP------ 115 (181)
T ss_dssp EEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS-------------------------------B-CCC------
T ss_pred EEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc-------------------------------c-cCC------
Confidence 99999999999999998 8999999999986432110 0 000
Q ss_pred HHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
......++|+++++|++|.++|.+.. .+++ +++++++++||+.+.
T Consensus 116 -----------------------------~~~~~~~~p~l~i~G~~D~~v~~~~~-----~~~~-~~~~~~~~~gH~~~~ 160 (181)
T 1isp_A 116 -----------------------------GTDPNQKILYTSIYSSADMIVMNYLS-----RLDG-ARNVQIHGVGHIGLL 160 (181)
T ss_dssp -----------------------------CSCTTCCCEEEEEEETTCSSSCHHHH-----CCBT-SEEEEESSCCTGGGG
T ss_pred -----------------------------CCCCccCCcEEEEecCCCcccccccc-----cCCC-CcceeeccCchHhhc
Confidence 00011357999999999999998743 3677 899999999999999
Q ss_pred cChhcHHHHHHHHhcC
Q 024681 249 SAPAIVGPVIRRALSR 264 (264)
Q Consensus 249 ~~~~~~~~~i~~fl~~ 264 (264)
++| ++.+.|.+||++
T Consensus 161 ~~~-~~~~~i~~fl~~ 175 (181)
T 1isp_A 161 YSS-QVNSLIKEGLNG 175 (181)
T ss_dssp GCH-HHHHHHHHHHTT
T ss_pred cCH-HHHHHHHHHHhc
Confidence 887 799999999964
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=199.54 Aligned_cols=251 Identities=17% Similarity=0.137 Sum_probs=151.7
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHH----------------Hhhhhc--CCceEEEecCCCCCCCCCCCCC-C---
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQ----------------RILPYL--NHHRVIMFDLVCAGSVNPDYFD-F--- 63 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~----------------~~~~~l--~g~~v~~~d~~g~G~s~~~~~~-~--- 63 (264)
.+.|...+. ++|+||++||++++...|. .+++.| .||+|+++|+||+|.|...... .
T Consensus 39 ~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 118 (354)
T 2rau_A 39 SLHKVNLIGGGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFT 118 (354)
T ss_dssp EEEEEEETTCCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGG
T ss_pred EEEeecccCCCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccc
Confidence 344544433 4589999999999998666 788888 7899999999999999753210 0
Q ss_pred cccchHHHHHHHHHHHHHH----hCCCeEEEEecChhHHHHHHHHHhC-CCccceeEEecCCCCCCCCCCCCCCccHHHH
Q 024681 64 RRYTTLDAYVDDLLNILDT----LGVNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFLNDEDYHGGFEEAEI 138 (264)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 138 (264)
..+ +++++++|+.++++. ++.++++++|||+||.+++.+|.++ |++|+++|++++.+.................
T Consensus 119 ~~~-~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 197 (354)
T 2rau_A 119 ANW-GWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSI 197 (354)
T ss_dssp TTC-SHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSH
T ss_pred cCC-cHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhhhH
Confidence 034 388899999998887 4788999999999999999999999 9999999999876543111111000000001
Q ss_pred HHHHHHHH-------hhhhhh-hhhcccccCCC---CChHHHHHHHHhhc---ccCc-----hh---hhhhh--------
Q 024681 139 DKVFRAME-------ANYEAW-AYGYAPLAVGA---DVPAAVREFSRTLF---NMRP-----DI---SLFVS-------- 188 (264)
Q Consensus 139 ~~~~~~~~-------~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~-----~~---~~~~~-------- 188 (264)
..+..... ...... ........... .............. ...+ .. .....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (354)
T 2rau_A 198 EEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWP 277 (354)
T ss_dssp HHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEE
T ss_pred HHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccc
Confidence 11110000 000000 00000000000 00000000000000 0000 00 00110
Q ss_pred -hhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccCh---hcHHHHHHHHhc
Q 024681 189 -KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAP---AIVGPVIRRALS 263 (264)
Q Consensus 189 -~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~ 263 (264)
......+....+.++++|+|+++|++|.++|. ..+.+ .++ +++++++++||+++.+++ +++.+.|.+||+
T Consensus 278 ~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~-~~~~l---~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~ 351 (354)
T 2rau_A 278 YRLSLERDLKFDYEGILVPTIAFVSERFGIQIF-DSKIL---PSN-SEIILLKGYGHLDVYTGENSEKDVNSVVLKWLS 351 (354)
T ss_dssp HHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHB-CGGGS---CTT-CEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHH
T ss_pred cccccCcccccccccCCCCEEEEecCCCCCCcc-chhhh---ccC-ceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHH
Confidence 11223456677889999999999999997663 32222 355 899999999999988765 999999999986
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=179.02 Aligned_cols=170 Identities=16% Similarity=0.152 Sum_probs=139.1
Q ss_pred CCCCceEEEecCCCCChhhHH--Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeE
Q 024681 14 GTGDRILVLAHGFGTDQSAWQ--RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRC 88 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~~~~~--~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 88 (264)
|.++|+||++||++++...|. .+.+.| .||.|+++|+||+|.|... . ...++.+.++++.+.++... .+++
T Consensus 1 g~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (176)
T 2qjw_A 1 GMSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDL---G-QLGDVRGRLQRLLEIARAATEKGPV 76 (176)
T ss_dssp CCSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGG---C-TTCCHHHHHHHHHHHHHHHHTTSCE
T ss_pred CCCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC---C-CCCCHHHHHHHHHHHHHhcCCCCCE
Confidence 456689999999999887554 888888 7999999999999998642 1 12247777788777777664 5799
Q ss_pred EEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHH
Q 024681 89 AYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAA 168 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
+++|||+||.+++.++.++| ++++|++++........
T Consensus 77 ~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~----------------------------------------- 113 (176)
T 2qjw_A 77 VLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLP----------------------------------------- 113 (176)
T ss_dssp EEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBC-----------------------------------------
T ss_pred EEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccccC-----------------------------------------
Confidence 99999999999999999998 99999999864321000
Q ss_pred HHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
.+.++++|+++++|++|.++|.+..+.+.+.+ + ++++++ ++||.+.
T Consensus 114 ------------------------------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~-~~~~~~-~~~H~~~- 159 (176)
T 2qjw_A 114 ------------------------------ALDAAAVPISIVHAWHDELIPAADVIAWAQAR-S-ARLLLV-DDGHRLG- 159 (176)
T ss_dssp ------------------------------CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-T-CEEEEE-SSCTTCT-
T ss_pred ------------------------------cccccCCCEEEEEcCCCCccCHHHHHHHHHhC-C-ceEEEe-CCCcccc-
Confidence 04567899999999999999999999999888 4 788888 8999974
Q ss_pred cChhcHHHHHHHHhcC
Q 024681 249 SAPAIVGPVIRRALSR 264 (264)
Q Consensus 249 ~~~~~~~~~i~~fl~~ 264 (264)
+.++++.+.+.+||++
T Consensus 160 ~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 160 AHVQAASRAFAELLQS 175 (176)
T ss_dssp TCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHh
Confidence 8899999999999974
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-30 Score=195.05 Aligned_cols=231 Identities=14% Similarity=0.075 Sum_probs=137.3
Q ss_pred eeEEEEeC---CCCceEEEecCCCCChh---hHHHhhhhc-CCceEEEec----CCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 7 ALHVRVVG---TGDRILVLAHGFGTDQS---AWQRILPYL-NHHRVIMFD----LVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 7 ~~~~~~~g---~~~p~vv~~hG~~~~~~---~~~~~~~~l-~g~~v~~~d----~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
.++|...| +++|+|||+||++++.. .|..+++.| .+|+|+++| +||||.|+.. . ..+++.+.
T Consensus 25 ~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~~------~-~~~d~~~~ 97 (335)
T 2q0x_A 25 YCKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHA------H-DAEDVDDL 97 (335)
T ss_dssp TEEEEEEEECTTSSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCHH------H-HHHHHHHH
T ss_pred ceeEEEeccCCCCCcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCcccc------C-cHHHHHHH
Confidence 46777665 34579999999987554 367788899 999999995 5999998521 0 13333333
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHH--hCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhh-
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASI--RRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAW- 152 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~--~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 152 (264)
+..+.+.++.++++|+||||||.+|+.+|. .+|++|+++|++++..... . ......................
T Consensus 98 ~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~ 172 (335)
T 2q0x_A 98 IGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPE--N---PLFTPEGCAARKEHVEKLMAEGR 172 (335)
T ss_dssp HHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTT--S---TTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccch--h---cccCHHHHHHHHHHHHHHhhccC
Confidence 333444478899999999999999999999 5799999999999753221 0 1111111111111110000000
Q ss_pred hhhcc--cccCCCCChHHHHHHHHhhcccCchhhhhhhhh-h--cCCccccccCCcccCEEEEecCCCCCcchhh-----
Q 024681 153 AYGYA--PLAVGADVPAAVREFSRTLFNMRPDISLFVSKT-V--FDTDLRGILGLVRVPCVIIQTSKDVSVPVSV----- 222 (264)
Q Consensus 153 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~----- 222 (264)
..... ........ ....+.... .......+... . ...+..+.+.++++|+|+|+|++|.++|++.
T Consensus 173 ~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~ 247 (335)
T 2q0x_A 173 GEDSLAMLKHYDIPI--TPARLAGGG---FPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTV 247 (335)
T ss_dssp TTCGGGGTTTCSSCC--CHHHHHTCS---CSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHH
T ss_pred ccccccchhhccCcc--CHHHHhhcc---CCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHH
Confidence 00000 00000000 011111100 00000001100 0 1123445678899999999999999999753
Q ss_pred HHHHHHHcCCCce--------E-----EEecCCCCcccccChhcHHHHHHHHhc
Q 024681 223 AEYLQRHLGGRNT--------V-----ELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 223 ~~~~~~~~~~~~~--------~-----~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+.+.+.+++ .+ + ++++++|| ++.+.|.+||+
T Consensus 248 ~~~l~~~~~~-~~~~~~~~~~~~~~~~~~i~~agH--------e~~~~i~~FL~ 292 (335)
T 2q0x_A 248 LEGVRDHTGC-NRVTVSYFNDTCDELRRVLKAAES--------EHVAAILQFLA 292 (335)
T ss_dssp HHHHHHHSSS-SCEEEEECCCEECTTSCEEECCHH--------HHHHHHHHHHH
T ss_pred HHHHHHhcCc-cccccccccchhhhhhcccCCCCC--------HHHHHHHHHHH
Confidence 5677888887 66 6 78999999 34788888875
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=181.70 Aligned_cols=180 Identities=17% Similarity=0.197 Sum_probs=138.6
Q ss_pred CCCCceEEEecCCCCChh-hHHHhhh-hc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEE
Q 024681 14 GTGDRILVLAHGFGTDQS-AWQRILP-YL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCA 89 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~~-~~~~~~~-~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (264)
|+++|+||++||++++.. .|..... .| +||+|+++|+| .|..+ +++++++++.++++.+ .++++
T Consensus 1 G~g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~---~~~~~--------~~~~~~~~~~~~~~~~-~~~~~ 68 (192)
T 1uxo_A 1 GRGTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP---NPLQP--------RLEDWLDTLSLYQHTL-HENTY 68 (192)
T ss_dssp ---CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS---CTTSC--------CHHHHHHHHHTTGGGC-CTTEE
T ss_pred CCCCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC---CCCCC--------CHHHHHHHHHHHHHhc-cCCEE
Confidence 445677999999999998 7888775 57 89999999999 23221 4899999999999998 78999
Q ss_pred EEecChhHHHHHHHHHhCCC--ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChH
Q 024681 90 YVGHSVSAMIGLLASIRRPD--LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPA 167 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
++||||||.+++.+|.++|+ +++++|++++....... . ... ..+..
T Consensus 69 l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~------~----------------~~~-~~~~~--------- 116 (192)
T 1uxo_A 69 LVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT------L----------------QML-DEFTQ--------- 116 (192)
T ss_dssp EEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT------C----------------GGG-GGGTC---------
T ss_pred EEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc------c----------------hhh-hhhhh---------
Confidence 99999999999999999999 99999999986432110 0 000 00000
Q ss_pred HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccc
Q 024681 168 AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPH 247 (264)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 247 (264)
. ..+. ..+.++++|+++++|++|.++|.+..+.+.+.+ + +++++++++||+++
T Consensus 117 -----------~-------------~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~gH~~~ 169 (192)
T 1uxo_A 117 -----------G-------------SFDH-QKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-D-AALYEVQHGGHFLE 169 (192)
T ss_dssp -----------S-------------CCCH-HHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-T-CEEEEETTCTTSCG
T ss_pred -----------c-------------CCCH-HHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-C-ceEEEeCCCcCccc
Confidence 0 0011 234456789999999999999999999999998 6 89999999999999
Q ss_pred ccChhcH---HHHHHHHhcC
Q 024681 248 LSAPAIV---GPVIRRALSR 264 (264)
Q Consensus 248 ~~~~~~~---~~~i~~fl~~ 264 (264)
.++++++ .+.+.+|+++
T Consensus 170 ~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 170 DEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp GGTCSCCHHHHHHHHHHHHC
T ss_pred ccccccHHHHHHHHHHHHHH
Confidence 9988554 7778887753
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-29 Score=178.96 Aligned_cols=172 Identities=13% Similarity=0.114 Sum_probs=134.0
Q ss_pred CCceEEEecC-----CCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeE
Q 024681 16 GDRILVLAHG-----FGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRC 88 (264)
Q Consensus 16 ~~p~vv~~hG-----~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (264)
..|+||++|| ...+...|..+++.| .||.|+++|+||+|.|.... .......++..+.+..+.+..+.+++
T Consensus 30 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~--~~~~~~~~d~~~~~~~l~~~~~~~~i 107 (208)
T 3trd_A 30 KSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRY--DNGVGEVEDLKAVLRWVEHHWSQDDI 107 (208)
T ss_dssp CSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC--CTTTHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCc--cchHHHHHHHHHHHHHHHHhCCCCeE
Confidence 4589999999 444456788899988 79999999999999997542 11112244444444444444466899
Q ss_pred EEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHH
Q 024681 89 AYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAA 168 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
+++|||+||.+++.++ .+| +++++|++++...
T Consensus 108 ~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~---------------------------------------------- 139 (208)
T 3trd_A 108 WLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVF---------------------------------------------- 139 (208)
T ss_dssp EEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTT----------------------------------------------
T ss_pred EEEEeCHHHHHHHHHh-ccC-CccEEEEeccccc----------------------------------------------
Confidence 9999999999999999 677 8999999998530
Q ss_pred HHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
..+ ...+..+++|+++++|++|.++|.+..+.+.+.+++.+++++++++||.+..
T Consensus 140 ------------------------~~~-~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 194 (208)
T 3trd_A 140 ------------------------YEG-FASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHG 194 (208)
T ss_dssp ------------------------SGG-GTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTT
T ss_pred ------------------------cCC-chhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccc
Confidence 000 0223455899999999999999999999999998876899999999999887
Q ss_pred cChhcHHHHHHHHhc
Q 024681 249 SAPAIVGPVIRRALS 263 (264)
Q Consensus 249 ~~~~~~~~~i~~fl~ 263 (264)
+. +++.+.|.+||+
T Consensus 195 ~~-~~~~~~i~~fl~ 208 (208)
T 3trd_A 195 RL-IELRELLVRNLA 208 (208)
T ss_dssp CH-HHHHHHHHHHHC
T ss_pred cH-HHHHHHHHHHhC
Confidence 65 889999999984
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-30 Score=186.03 Aligned_cols=171 Identities=17% Similarity=0.184 Sum_probs=136.1
Q ss_pred CCCCceEEEecCCCC---Ch--hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC--
Q 024681 14 GTGDRILVLAHGFGT---DQ--SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-- 84 (264)
Q Consensus 14 g~~~p~vv~~hG~~~---~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 84 (264)
+++.|+||++||+++ +. ..|..+++.| .||.|+++|+||+|.|..... . +.... +|+.++++.+.
T Consensus 44 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~----~-~~~~~-~d~~~~i~~l~~~ 117 (249)
T 2i3d_A 44 EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD----H-GAGEL-SDAASALDWVQSL 117 (249)
T ss_dssp STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC----S-SHHHH-HHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC----C-ccchH-HHHHHHHHHHHHh
Confidence 445689999999743 22 3567888888 899999999999999975421 1 24444 77777666652
Q ss_pred ---CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC
Q 024681 85 ---VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 85 ---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
.++++++|||+||.+++.+|.++|+ ++++|++++......
T Consensus 118 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~------------------------------------ 160 (249)
T 2i3d_A 118 HPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD------------------------------------ 160 (249)
T ss_dssp CTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC------------------------------------
T ss_pred CCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh------------------------------------
Confidence 2479999999999999999999998 999999998543100
Q ss_pred CCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC----CceEE
Q 024681 162 GADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG----RNTVE 237 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~ 237 (264)
...+.++++|+++++|++|.++|.+..+.+.+.++. .++++
T Consensus 161 -----------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (249)
T 2i3d_A 161 -----------------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHR 205 (249)
T ss_dssp -----------------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEE
T ss_pred -----------------------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEE
Confidence 122456789999999999999999999999999983 28999
Q ss_pred EecCCCCcccccChhcHHHHHHHHhc
Q 024681 238 LLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 238 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
++++++|.+. +.++++.+.+.+||+
T Consensus 206 ~~~g~~H~~~-~~~~~~~~~i~~fl~ 230 (249)
T 2i3d_A 206 TLPGANHFFN-GKVDELMGECEDYLD 230 (249)
T ss_dssp EETTCCTTCT-TCHHHHHHHHHHHHH
T ss_pred EECCCCcccc-cCHHHHHHHHHHHHH
Confidence 9999999988 789999999999986
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=180.49 Aligned_cols=174 Identities=14% Similarity=0.104 Sum_probs=131.8
Q ss_pred CCceEEEecCCCCC---hhhHHH-hhhhc-C--CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-Ce
Q 024681 16 GDRILVLAHGFGTD---QSAWQR-ILPYL-N--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NR 87 (264)
Q Consensus 16 ~~p~vv~~hG~~~~---~~~~~~-~~~~l-~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 87 (264)
.+|+||++||++++ ...|.. +.+.| + ||+|+++|+||++. .+..+++..+++.++. ++
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~--------------~~~~~~~~~~~~~l~~~~~ 68 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT--------------ARESIWLPFMETELHCDEK 68 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT--------------CCHHHHHHHHHHTSCCCTT
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc--------------ccHHHHHHHHHHHhCcCCC
Confidence 35799999999998 456766 78888 5 99999999998631 1245667777888888 89
Q ss_pred EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChH
Q 024681 88 CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPA 167 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
++++||||||.+++.+|.++| ++++|++++....... .. . ....+ +...
T Consensus 69 ~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~--------~~------~----~~~~~--------~~~~--- 117 (194)
T 2qs9_A 69 TIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGD--------EN------E----RASGY--------FTRP--- 117 (194)
T ss_dssp EEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTC--------HH------H----HHTST--------TSSC---
T ss_pred EEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccch--------hh------h----HHHhh--------hccc---
Confidence 999999999999999999998 9999999986432110 00 0 00000 0000
Q ss_pred HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccc
Q 024681 168 AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPH 247 (264)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 247 (264)
.....+.++..|+++++|++|.++|.+..+.+.+.+ + +++.+++++||+++
T Consensus 118 ---------------------------~~~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~-~~~~~~~~~gH~~~ 168 (194)
T 2qs9_A 118 ---------------------------WQWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-E-TKLHKFTDCGHFQN 168 (194)
T ss_dssp ---------------------------CCHHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-T-CEEEEESSCTTSCS
T ss_pred ---------------------------ccHHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C-CeEEEeCCCCCccc
Confidence 000112234679999999999999999999999999 6 89999999999999
Q ss_pred ccChhcHHHHHHHHhcC
Q 024681 248 LSAPAIVGPVIRRALSR 264 (264)
Q Consensus 248 ~~~~~~~~~~i~~fl~~ 264 (264)
.++|+.+.+.+ +||++
T Consensus 169 ~~~p~~~~~~~-~fl~~ 184 (194)
T 2qs9_A 169 TEFHELITVVK-SLLKV 184 (194)
T ss_dssp SCCHHHHHHHH-HHHTC
T ss_pred hhCHHHHHHHH-HHHHh
Confidence 99999887776 89864
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=186.79 Aligned_cols=178 Identities=17% Similarity=0.159 Sum_probs=140.2
Q ss_pred eeeEEEEeC--CCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH---
Q 024681 6 EALHVRVVG--TGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN--- 78 (264)
Q Consensus 6 ~~~~~~~~g--~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~--- 78 (264)
..++|...+ ...|+||++||++++...|..+++.| .||.|+++|+||+|.+... ...++....+.+.+
T Consensus 41 ~~l~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~-----~~~d~~~~~~~l~~~~~ 115 (262)
T 1jfr_A 41 GTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPDS-----RGRQLLSALDYLTQRSS 115 (262)
T ss_dssp EEEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHHH-----HHHHHHHHHHHHHHTST
T ss_pred eeEEecCCCCCCCCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCCch-----hHHHHHHHHHHHHhccc
Confidence 356666553 23479999999999999999999999 7999999999999976421 00112222333322
Q ss_pred HHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc
Q 024681 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP 158 (264)
Q Consensus 79 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
++..++.++++++|||+||.+++.+|.++|+ ++++|++++...
T Consensus 116 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~------------------------------------ 158 (262)
T 1jfr_A 116 VRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT------------------------------------ 158 (262)
T ss_dssp TGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------------------------------
T ss_pred cccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc------------------------------------
Confidence 1234456799999999999999999999997 999999987310
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHHHHcCCC--ce
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQRHLGGR--NT 235 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~--~~ 235 (264)
...+.++++|+++++|++|.+++.+. .+.+.+.+++. ++
T Consensus 159 --------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~ 200 (262)
T 1jfr_A 159 --------------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKA 200 (262)
T ss_dssp --------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEE
T ss_pred --------------------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCce
Confidence 12345678999999999999999998 99999998751 58
Q ss_pred EEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 236 VELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++++||..+.+.++++.+.+.+||+
T Consensus 201 ~~~~~~~~H~~~~~~~~~~~~~i~~fl~ 228 (262)
T 1jfr_A 201 YLELRGASHFTPNTSDTTIAKYSISWLK 228 (262)
T ss_dssp EEEETTCCTTGGGSCCHHHHHHHHHHHH
T ss_pred EEEeCCCCcCCcccchHHHHHHHHHHHH
Confidence 9999999999999999999999999986
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=193.51 Aligned_cols=201 Identities=16% Similarity=0.142 Sum_probs=146.6
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC------CCe
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG------VNR 87 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 87 (264)
..|+||++||++++...|..+++.| .||.|+++|+||+|.|... ...+ ++.++++|+.++++.+. .++
T Consensus 27 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~---~~~~-~~~~~~~d~~~~i~~l~~~~~~~~~~ 102 (290)
T 3ksr_A 27 GMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASM---RQSV-TRAQNLDDIKAAYDQLASLPYVDAHS 102 (290)
T ss_dssp SEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGG---TTTC-BHHHHHHHHHHHHHHHHTSTTEEEEE
T ss_pred CCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCC---cccc-cHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 5689999999999999999999999 6999999999999999653 2334 38889999999999883 248
Q ss_pred EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChH
Q 024681 88 CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPA 167 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
++++|||+||.+++.++.++| ++++++++|...... .+. ........ ...
T Consensus 103 v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~--~~~--~~~~~~~~-----~~~------------------- 152 (290)
T 3ksr_A 103 IAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDA--HWD--QPKVSLNA-----DPD------------------- 152 (290)
T ss_dssp EEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSS--CTT--SBHHHHHH-----STT-------------------
T ss_pred eEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhh--hhh--cccccccC-----Chh-------------------
Confidence 999999999999999999988 889999987543221 110 00000000 000
Q ss_pred HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC--ceEEEecCCCCc
Q 024681 168 AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR--NTVELLKIEGHL 245 (264)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~ 245 (264)
...+...... ....+....+.++++|+++++|++|.+++.+..+.+.+.+++. +++.+++++||.
T Consensus 153 -~~~~~~~~~~------------~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 219 (290)
T 3ksr_A 153 -LMDYRRRALA------------PGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHA 219 (290)
T ss_dssp -HHHHTTSCCC------------GGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTT
T ss_pred -hhhhhhhhhh------------hccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCC
Confidence 0000000000 0011112234567889999999999999999999999998763 459999999998
Q ss_pred cccc-ChhcHHHHHHHHhc
Q 024681 246 PHLS-APAIVGPVIRRALS 263 (264)
Q Consensus 246 ~~~~-~~~~~~~~i~~fl~ 263 (264)
+..+ .++++.+.+.+||+
T Consensus 220 ~~~~~~~~~~~~~i~~fl~ 238 (290)
T 3ksr_A 220 LSVKEHQQEYTRALIDWLT 238 (290)
T ss_dssp CCSHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHH
Confidence 7654 78899999999985
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-29 Score=190.66 Aligned_cols=220 Identities=14% Similarity=0.181 Sum_probs=150.4
Q ss_pred EEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCC-----------------CCcccchH
Q 024681 9 HVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYF-----------------DFRRYTTL 69 (264)
Q Consensus 9 ~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~-----------------~~~~~~~~ 69 (264)
.|...+. ..|+||++||++++...|..+...+ .||.|+++|+||+|.|..... ++..+. +
T Consensus 99 ~~~P~~~~~~p~vv~~HG~g~~~~~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~ 177 (346)
T 3fcy_A 99 YIKPKTEGKHPALIRFHGYSSNSGDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNML-F 177 (346)
T ss_dssp EEEESCSSCEEEEEEECCTTCCSCCSGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCH-H
T ss_pred EEecCCCCCcCEEEEECCCCCCCCChhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHH-H
Confidence 3334343 4589999999999999999888777 999999999999999865422 233443 6
Q ss_pred HHHHHHHHHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFR 143 (264)
Q Consensus 70 ~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (264)
....+|+.++++.+ +.++++++|||+||.+|+.+|.++|+ |+++|+++|..... ....
T Consensus 178 ~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~--------------~~~~- 241 (346)
T 3fcy_A 178 RHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDY--------------KRVW- 241 (346)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCH--------------HHHH-
T ss_pred HHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCH--------------HHHh-
Confidence 67777877777665 23589999999999999999999998 99999998743210 0000
Q ss_pred HHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH
Q 024681 144 AMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA 223 (264)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 223 (264)
... ...........+...... ...............+....+.++++|+++++|+.|.++|++.+
T Consensus 242 --~~~------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~ 306 (346)
T 3fcy_A 242 --DLD------------LAKNAYQEITDYFRLFDP-RHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTV 306 (346)
T ss_dssp --HTT------------CCCGGGHHHHHHHHHHCT-TCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHH
T ss_pred --hcc------------ccccchHHHHHHHHhcCC-CcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHH
Confidence 000 000000011111111100 01111112222223344455677899999999999999999999
Q ss_pred HHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 224 EYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
..+.+.++..+++++++++||... +++.+.+.+||++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~gH~~~----~~~~~~i~~fl~~ 343 (346)
T 3fcy_A 307 FAAYNNIQSKKDIKVYPDYGHEPM----RGFGDLAMQFMLE 343 (346)
T ss_dssp HHHHTTCCSSEEEEEETTCCSSCC----TTHHHHHHHHHHT
T ss_pred HHHHHhcCCCcEEEEeCCCCCcCH----HHHHHHHHHHHHH
Confidence 999999885489999999999887 6677888888864
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=192.51 Aligned_cols=174 Identities=14% Similarity=0.179 Sum_probs=139.1
Q ss_pred CCceEEEecCCCCChhhHH-------Hhhhhc--CCceEEEecCCCCCCCCCCCCCCc----------------------
Q 024681 16 GDRILVLAHGFGTDQSAWQ-------RILPYL--NHHRVIMFDLVCAGSVNPDYFDFR---------------------- 64 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~-------~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~---------------------- 64 (264)
.+++|||+||++.+...|. .+++.| +||.|+++|+||||.|........
T Consensus 61 ~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (328)
T 1qlw_A 61 KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEA 140 (328)
T ss_dssp CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCHHH
T ss_pred CCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccceeccchhh
Confidence 5579999999999999998 488887 899999999999999975421000
Q ss_pred -------------ccch-------HHH------------------HHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 65 -------------RYTT-------LDA------------------YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 65 -------------~~~~-------~~~------------------~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
.+.. +++ .++++.++++.++ +++++|||+||.+++.+|.+
T Consensus 141 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~lvGhS~GG~~a~~~a~~ 218 (328)
T 1qlw_A 141 AWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GTVLLSHSQSGIYPFQTAAM 218 (328)
T ss_dssp HHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SEEEEEEGGGTTHHHHHHHH
T ss_pred hhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--CceEEEECcccHHHHHHHHh
Confidence 0000 333 7788888888875 99999999999999999999
Q ss_pred CCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhh
Q 024681 107 RPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLF 186 (264)
Q Consensus 107 ~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (264)
+|++|+++|+++|...
T Consensus 219 ~p~~v~~~v~~~p~~~---------------------------------------------------------------- 234 (328)
T 1qlw_A 219 NPKGITAIVSVEPGEC---------------------------------------------------------------- 234 (328)
T ss_dssp CCTTEEEEEEESCSCC----------------------------------------------------------------
T ss_pred ChhheeEEEEeCCCCC----------------------------------------------------------------
Confidence 9999999999997420
Q ss_pred hhhhhcCCccccccCCcccCEEEEecCCCCCcch-----hhHHHHHHHcC----CCceEEEecCCC-----CcccccC-h
Q 024681 187 VSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV-----SVAEYLQRHLG----GRNTVELLKIEG-----HLPHLSA-P 251 (264)
Q Consensus 187 ~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~-----~~~~~~~~~~~----~~~~~~~~~~~g-----H~~~~~~-~ 251 (264)
.+.......+++|+|+++|++|.++|. +.++.+.+.++ + +++++++++| |+++.+. +
T Consensus 235 -------~~~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~-~~~~~~~~~gi~G~~H~~~~~~~~ 306 (328)
T 1qlw_A 235 -------PKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGK-GQLMSLPALGVHGNSHMMMQDRNN 306 (328)
T ss_dssp -------CCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCC-EEEEEGGGGTCCCCCTTGGGSTTH
T ss_pred -------CCHHHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCC-ceEEEcCCCCcCCCcccchhccCH
Confidence 000011122468999999999999996 88888888886 5 8999999666 9999988 9
Q ss_pred hcHHHHHHHHhc
Q 024681 252 AIVGPVIRRALS 263 (264)
Q Consensus 252 ~~~~~~i~~fl~ 263 (264)
+++.+.|.+||+
T Consensus 307 ~~~~~~i~~fl~ 318 (328)
T 1qlw_A 307 LQVADLILDWIG 318 (328)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999986
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=198.01 Aligned_cols=233 Identities=12% Similarity=0.008 Sum_probs=147.0
Q ss_pred eCCCC-ceEEEecCCCCChhhHHHhh--hhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC--C
Q 024681 13 VGTGD-RILVLAHGFGTDQSAWQRIL--PYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--N 86 (264)
Q Consensus 13 ~g~~~-p~vv~~hG~~~~~~~~~~~~--~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 86 (264)
.++++ |+||++||++++...|.... ..+ +||+|+++|+||+|.|.... ..+ ..+..+|+.++++.+.. +
T Consensus 154 ~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~---~~~--~~~~~~d~~~~~~~l~~~~~ 228 (405)
T 3fnb_A 154 SEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQG---LHF--EVDARAAISAILDWYQAPTE 228 (405)
T ss_dssp CSSSCCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGT---CCC--CSCTHHHHHHHHHHCCCSSS
T ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCC---CCC--CccHHHHHHHHHHHHHhcCC
Confidence 44444 89999999999999987766 445 99999999999999995321 111 12457788888888876 7
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP 166 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
+++++|||+||.+++.+|.++| +++++|+++|..... ....................+ .........
T Consensus 229 ~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~-----------~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~ 295 (405)
T 3fnb_A 229 KIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVA-----------EVFRISFSTALKAPKTILKWG-SKLVTSVNK 295 (405)
T ss_dssp CEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHH-----------HHHHHHCC-------------------CCCH
T ss_pred CEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHH-----------HHHHHhhhhhhhCcHHHHHHH-HHHhhccch
Confidence 9999999999999999999999 899999999864320 000000000000000000000 000000111
Q ss_pred HHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---CceEEEe---c
Q 024681 167 AAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTVELL---K 240 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~---~ 240 (264)
.....+..................+........+.++++|+|+++|++|.++|++.++.+.+.+++ .++++++ +
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~ 375 (405)
T 3fnb_A 296 VAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSES 375 (405)
T ss_dssp HHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTT
T ss_pred hHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEEEEcCCc
Confidence 111111111111111111111111111122222677899999999999999999999999998853 2679999 6
Q ss_pred CCCCcccccChhcHHHHHHHHhc
Q 024681 241 IEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
++||.+..++++.+.+.|.+||+
T Consensus 376 h~gh~~~~~~~~~~~~~i~~fL~ 398 (405)
T 3fnb_A 376 GADAHCQVNNFRLMHYQVFEWLN 398 (405)
T ss_dssp TCCSGGGGGGHHHHHHHHHHHHH
T ss_pred cchhccccchHHHHHHHHHHHHH
Confidence 67788889999999999999986
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-29 Score=180.96 Aligned_cols=176 Identities=14% Similarity=0.101 Sum_probs=140.5
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCC-----------cccchHHHHHHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDF-----------RRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 82 (264)
..|+||++||++++...|..+++.| .||.|+++|+||+|.|....... ....+.+...+|+.++++.
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRY 106 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHH
Confidence 4579999999999999999999999 79999999999999886421111 0112477888999999998
Q ss_pred hC-----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 83 LG-----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 83 ~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
+. .++++++|||+||.+++.+|.++| +++++++.+....
T Consensus 107 l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~---------------------------------- 150 (236)
T 1zi8_A 107 ARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE---------------------------------- 150 (236)
T ss_dssp HTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG----------------------------------
T ss_pred HHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc----------------------------------
Confidence 85 468999999999999999999998 8999988763110
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC--Cce
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG--RNT 235 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~ 235 (264)
+....+.++++|+++++|++|.++|.+..+.+.+.+.. .++
T Consensus 151 -------------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 193 (236)
T 1zi8_A 151 -------------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQ 193 (236)
T ss_dssp -------------------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEE
T ss_pred -------------------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCce
Confidence 11233456789999999999999999999999988832 289
Q ss_pred EEEecCCCCcccccCh--------hcHHHHHHHHhcC
Q 024681 236 VELLKIEGHLPHLSAP--------AIVGPVIRRALSR 264 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~--------~~~~~~i~~fl~~ 264 (264)
++++++++|.+..+.+ +++.+.+.+||++
T Consensus 194 ~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 230 (236)
T 1zi8_A 194 VHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVP 230 (236)
T ss_dssp EEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGG
T ss_pred EEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHH
Confidence 9999999998776654 4677888888863
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-29 Score=188.64 Aligned_cols=178 Identities=17% Similarity=0.155 Sum_probs=140.8
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH-----
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN----- 78 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~----- 78 (264)
..+++...++..|+||++||++++...|..+++.| +||.|+++|+||+|.|... ...++....+.+.+
T Consensus 85 ~~~~~p~~~~~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~-----~~~d~~~~~~~l~~~~~~~ 159 (306)
T 3vis_A 85 GTIYYPRENNTYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDS-----RARQLNAALDYMLTDASSA 159 (306)
T ss_dssp EEEEEESSCSCEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCHHH-----HHHHHHHHHHHHHHTSCHH
T ss_pred eEEEeeCCCCCCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCcch-----HHHHHHHHHHHHHhhcchh
Confidence 45666555555689999999999999999999999 7899999999999988531 00112222222222
Q ss_pred HHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc
Q 024681 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP 158 (264)
Q Consensus 79 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
+...++.++++++|||+||.+++.+|.++|+ ++++|++++...
T Consensus 160 ~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------------------------------ 202 (306)
T 3vis_A 160 VRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------------------------------ 202 (306)
T ss_dssp HHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------------------------------
T ss_pred hhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC------------------------------------
Confidence 1222345699999999999999999999997 999999987421
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh-hHHHHHHHcCC--Cce
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYLQRHLGG--RNT 235 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~--~~~ 235 (264)
...+.++++|+++++|++|.++|.+ ..+.+.+.+++ .++
T Consensus 203 --------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~ 244 (306)
T 3vis_A 203 --------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKA 244 (306)
T ss_dssp --------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEE
T ss_pred --------------------------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCce
Confidence 1234567899999999999999998 69999999986 477
Q ss_pred EEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 236 VELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++++||.++.+.++++.+.+.+||+
T Consensus 245 ~~~~~g~gH~~~~~~~~~~~~~i~~fl~ 272 (306)
T 3vis_A 245 YLELDGASHFAPNITNKTIGMYSVAWLK 272 (306)
T ss_dssp EEEETTCCTTGGGSCCHHHHHHHHHHHH
T ss_pred EEEECCCCccchhhchhHHHHHHHHHHH
Confidence 9999999999999999999999999986
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-30 Score=185.90 Aligned_cols=215 Identities=14% Similarity=0.142 Sum_probs=131.7
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC---CeEEEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV---NRCAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~ 91 (264)
.+++|||+||++++...|..+++.| .+|+|+++|+||||.|... ..+++.+.+..+++.++. ++++|+
T Consensus 12 ~~~~lv~lhg~g~~~~~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~lv 83 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQTS--------AIEDLEELTDLYKQELNLRPDRPFVLF 83 (242)
T ss_dssp CCCEEESSCCCCHHHHHHHHHHHHHCCSCCCEEEECCSSCCSCCC--------TTTHHHHHHHHTTTTCCCCCCSSCEEE
T ss_pred CCceEEEECCCCCCHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCC--------CcCCHHHHHHHHHHHHHhhcCCCEEEE
Confidence 4578999999999999999999999 9999999999999999643 123344444455556665 689999
Q ss_pred ecChhHHHHHHHHHh------CCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 92 GHSVSAMIGLLASIR------RPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~------~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
||||||.+|+.+|.+ +|++ +++.+..+...... ........ ... ..+... ....
T Consensus 84 GhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~-~~~~~~~~---~~~-----------~~~~~~--~~~~ 143 (242)
T 2k2q_B 84 GHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQRK-KVSHLPDD---QFL-----------DHIIQL--GGMP 143 (242)
T ss_dssp CCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCSC-CCSSCTTH---HHH-----------HTTCCT--TCCC
T ss_pred eCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCcc-cccCCCHH---HHH-----------HHHHHh--CCCC
Confidence 999999999999987 4553 34433211111100 00000000 000 000000 0000
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCc
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHL 245 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 245 (264)
...... .....................+.. .+.++++|+++++|++|.+++ .....+.+..++ .++++++ +||+
T Consensus 144 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~~-~~~~~~~-~gH~ 217 (242)
T 2k2q_B 144 AELVEN--KEVMSFFLPSFRSDYRALEQFELY-DLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAKD-ITFHQFD-GGHM 217 (242)
T ss_dssp CTTTHH--HHTTTTCCSCHHHHHHHHTCCCCS-CCTTCCCSEEEEEECSSCCHH-HHHHHHHTTCCC-SEEEEEE-CCCS
T ss_pred hHHhcC--HHHHHHHHHHHHHHHHHHHhcccC-CCCccCCCEEEEeeCCCCcCH-HHHHHHHHHhcC-CeEEEEe-CCce
Confidence 000000 000000001111111111111221 267899999999999999865 445666666777 6788888 6999
Q ss_pred ccccChhcHHHHHHHHhcC
Q 024681 246 PHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 246 ~~~~~~~~~~~~i~~fl~~ 264 (264)
++.|+|+++++.|.+||++
T Consensus 218 ~~~e~p~~~~~~i~~fl~~ 236 (242)
T 2k2q_B 218 FLLSQTEEVAERIFAILNQ 236 (242)
T ss_dssp HHHHHCHHHHHHHHHHHHT
T ss_pred eEcCCHHHHHHHHHHHhhc
Confidence 9999999999999999863
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-28 Score=177.65 Aligned_cols=179 Identities=13% Similarity=0.171 Sum_probs=140.4
Q ss_pred eCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEe-------------------cCCCCCCCCCCCCCCcccchHHH
Q 024681 13 VGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMF-------------------DLVCAGSVNPDYFDFRRYTTLDA 71 (264)
Q Consensus 13 ~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~-------------------d~~g~G~s~~~~~~~~~~~~~~~ 71 (264)
.++..|+||++||++++...|..+++.| .||.|+++ |++|+ .+... ....++++
T Consensus 19 ~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~----~~~~~~~~ 93 (232)
T 1fj2_A 19 ARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQ----EDESGIKQ 93 (232)
T ss_dssp SSCCSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCC----BCHHHHHH
T ss_pred CCCCCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-Ccccc----cccHHHHH
Confidence 3446689999999999999999999999 59999998 66666 22221 22235889
Q ss_pred HHHHHHHHHHHh---CC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH
Q 024681 72 YVDDLLNILDTL---GV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME 146 (264)
Q Consensus 72 ~~~~~~~~~~~~---~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
.++++.++++.+ +. ++++++|||+||.+++.++.++|++++++|++++.......
T Consensus 94 ~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~-------------------- 153 (232)
T 1fj2_A 94 AAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS-------------------- 153 (232)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG--------------------
T ss_pred HHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc--------------------
Confidence 999999999987 55 79999999999999999999999999999999985321100
Q ss_pred hhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHH
Q 024681 147 ANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYL 226 (264)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 226 (264)
+ . .....+..+++|+++++|++|.+++.+..+.+
T Consensus 154 ---------~-----~--------------------------------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 187 (232)
T 1fj2_A 154 ---------F-----P--------------------------------QGPIGGANRDISILQCHGDCDPLVPLMFGSLT 187 (232)
T ss_dssp ---------S-----C--------------------------------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHH
T ss_pred ---------c-----c--------------------------------ccccccccCCCCEEEEecCCCccCCHHHHHHH
Confidence 0 0 00123456789999999999999999988888
Q ss_pred HHHc------CCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 227 QRHL------GGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 227 ~~~~------~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+.+ ++ +++++++++||.+..+..+++.+.+.++|+
T Consensus 188 ~~~l~~~~~~~~-~~~~~~~~~~H~~~~~~~~~i~~~l~~~l~ 229 (232)
T 1fj2_A 188 VEKLKTLVNPAN-VTFKTYEGMMHSSCQQEMMDVKQFIDKLLP 229 (232)
T ss_dssp HHHHHHHSCGGG-EEEEEETTCCSSCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhCCCCc-eEEEEeCCCCcccCHHHHHHHHHHHHHhcC
Confidence 7776 44 799999999999977777777777776664
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-29 Score=185.10 Aligned_cols=229 Identities=14% Similarity=0.097 Sum_probs=142.0
Q ss_pred CCceEEEecCCC---CChhhHH-Hhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEE
Q 024681 16 GDRILVLAHGFG---TDQSAWQ-RILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAY 90 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~-~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 90 (264)
..|+||++||++ ++...|. .+.+.| ++|+|+++|+||+|.+.. .. ..++..+.+..+.+.++.+++++
T Consensus 28 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~~~~~~~~------~~-~~~d~~~~~~~l~~~~~~~~i~l 100 (275)
T 3h04_A 28 TKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSL------DC-IIEDVYASFDAIQSQYSNCPIFT 100 (275)
T ss_dssp CSEEEEEECCSTTTSCCTTCSCHHHHHHHTTTEEEEEECCCCTTTSCH------HH-HHHHHHHHHHHHHHTTTTSCEEE
T ss_pred CCCEEEEEECCcccCCchhhhHHHHHHHHHhCceEEeeccccCCcccc------ch-hHHHHHHHHHHHHhhCCCCCEEE
Confidence 457999999988 6666554 777788 669999999999987642 11 35666666666667777789999
Q ss_pred EecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhhhhhhhcccc--cCCCCChH
Q 024681 91 VGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYEAWAYGYAPL--AVGADVPA 167 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~ 167 (264)
+||||||.+++.+|.+ ++++++|++++.......... .. . ........ ........+... ........
T Consensus 101 ~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~--~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (275)
T 3h04_A 101 FGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFK--TT-N----SYYAKIAQSINETMIAQLTSPTPVVQDQIAQ 171 (275)
T ss_dssp EEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHH--SC-C----HHHHHHHTTSCHHHHHTTSCSSCCSSCSSGG
T ss_pred EEecHHHHHHHHHhcc--CCccEEEeccccccccccccc--cc-c----chhhcccccchHHHHhcccCCCCcCCCcccc
Confidence 9999999999999998 789999999986543111000 00 0 00001100 011111111100 00111111
Q ss_pred HHHH--HHHhhcccCchhhhhhhhhhcC-CccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCC
Q 024681 168 AVRE--FSRTLFNMRPDISLFVSKTVFD-TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGH 244 (264)
Q Consensus 168 ~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 244 (264)
.... ........ ............. ......+.+++ |+|+++|++|.++|.+.++.+.+.+++ .++++++++||
T Consensus 172 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~H 248 (275)
T 3h04_A 172 RFLIYVYARGTGKW-INMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPVEESEHIMNHVPH-STFERVNKNEH 248 (275)
T ss_dssp GHHHHHHHHHHTCH-HHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCTHHHHHHHTTCSS-EEEEEECSSCS
T ss_pred chhhhhhhhhcCch-HHhhccccccccccccccchhccCC-CEEEEecCCCCCCChHHHHHHHHhcCC-ceEEEeCCCCC
Confidence 0000 00000000 0000000000000 01112345667 999999999999999999999999998 89999999999
Q ss_pred cccccCh---hcHHHHHHHHhc
Q 024681 245 LPHLSAP---AIVGPVIRRALS 263 (264)
Q Consensus 245 ~~~~~~~---~~~~~~i~~fl~ 263 (264)
.++.+.+ +++.+.+.+||+
T Consensus 249 ~~~~~~~~~~~~~~~~i~~fl~ 270 (275)
T 3h04_A 249 DFDRRPNDEAITIYRKVVDFLN 270 (275)
T ss_dssp CTTSSCCHHHHHHHHHHHHHHH
T ss_pred CcccCCchhHHHHHHHHHHHHH
Confidence 9999988 689999999986
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-30 Score=184.98 Aligned_cols=174 Identities=20% Similarity=0.285 Sum_probs=138.1
Q ss_pred CCceEEEecCCCCChhh--HHHhhhhc--CCceEEEecCCCCCCCCCCCCC-CcccchHHHHHHHHHHHHHHhCCC----
Q 024681 16 GDRILVLAHGFGTDQSA--WQRILPYL--NHHRVIMFDLVCAGSVNPDYFD-FRRYTTLDAYVDDLLNILDTLGVN---- 86 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~--~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---- 86 (264)
..|+||++||++++... +..+++.| .||.|+++|+||+|.|...... ...+ +++++++|+.++++.+..+
T Consensus 34 ~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~-~~~~~~~d~~~~i~~l~~~~~~~ 112 (223)
T 2o2g_A 34 ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRF-DIGLLASRLVGATDWLTHNPDTQ 112 (223)
T ss_dssp CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCSSTT-CHHHHHHHHHHHHHHHHHCTTTT
T ss_pred CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhcccC-cHHHHHHHHHHHHHHHHhCcCCC
Confidence 45899999999988874 45788888 7999999999999988532100 0113 4888999999999887433
Q ss_pred --eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 87 --RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 87 --~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
+++++|||+||.+++.++.++|++++++|++++.+..
T Consensus 113 ~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~----------------------------------------- 151 (223)
T 2o2g_A 113 HLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDL----------------------------------------- 151 (223)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGG-----------------------------------------
T ss_pred CCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCc-----------------------------------------
Confidence 9999999999999999999999999999999974210
Q ss_pred ChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCC
Q 024681 165 VPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGH 244 (264)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 244 (264)
....+.++++|+++++|++|.++|.+..+.+.+..++ .+++.++++||
T Consensus 152 -------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~H 199 (223)
T 2o2g_A 152 -------------------------------APSALPHVKAPTLLIVGGYDLPVIAMNEDALEQLQTS-KRLVIIPRASH 199 (223)
T ss_dssp -------------------------------CTTTGGGCCSCEEEEEETTCHHHHHHHHHHHHHCCSS-EEEEEETTCCT
T ss_pred -------------------------------CHHHHhcCCCCEEEEEccccCCCCHHHHHHHHhhCCC-eEEEEeCCCCc
Confidence 0022445689999999999999987766666666566 89999999999
Q ss_pred cccc-cChhcHHHHHHHHhc
Q 024681 245 LPHL-SAPAIVGPVIRRALS 263 (264)
Q Consensus 245 ~~~~-~~~~~~~~~i~~fl~ 263 (264)
.+.. +.++++.+.+.+||+
T Consensus 200 ~~~~~~~~~~~~~~i~~fl~ 219 (223)
T 2o2g_A 200 LFEEPGALTAVAQLASEWFM 219 (223)
T ss_dssp TCCSTTHHHHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHH
Confidence 8766 456889999999986
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=172.15 Aligned_cols=171 Identities=13% Similarity=0.107 Sum_probs=135.5
Q ss_pred EEEEeCCCCceEEEecCCCCCh-hhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC
Q 024681 9 HVRVVGTGDRILVLAHGFGTDQ-SAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 9 ~~~~~g~~~p~vv~~hG~~~~~-~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (264)
+|...|+ +|+||++||++++. ..|......+ . .++.+|.+|++. + +++++++++.++++.++ +
T Consensus 10 ~~~~~g~-~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~----------~-~~~~~~~~~~~~~~~~~-~ 74 (191)
T 3bdv_A 10 RLTEVSQ-QLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWYQ----------A-DLDRWVLAIRRELSVCT-Q 74 (191)
T ss_dssp HHHHHHT-TCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCSS----------C-CHHHHHHHHHHHHHTCS-S
T ss_pred ccCCCCC-CceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCCC----------c-CHHHHHHHHHHHHHhcC-C
Confidence 3434444 47999999999887 6787776655 4 346678888742 1 48999999999999988 8
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP 166 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
+++++||||||.+++.+|.++|++++++|++++....... + ..
T Consensus 75 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-----------------------------~-----~~--- 117 (191)
T 3bdv_A 75 PVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE-----------------------------I-----DD--- 117 (191)
T ss_dssp CEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT-----------------------------C-----TT---
T ss_pred CeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccccc-----------------------------C-----cc---
Confidence 9999999999999999999999999999999986431100 0 00
Q ss_pred HHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcc
Q 024681 167 AAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLP 246 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 246 (264)
. ..+.++++|+++++|++|.++|.+..+.+.+.+ + +++++++++||++
T Consensus 118 -~-----------------------------~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~gH~~ 165 (191)
T 3bdv_A 118 -R-----------------------------IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-D-SELVDVGEAGHIN 165 (191)
T ss_dssp -T-----------------------------SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-T-CEEEECCSCTTSS
T ss_pred -c-----------------------------cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-C-CcEEEeCCCCccc
Confidence 0 235677899999999999999999999999888 5 8999999999998
Q ss_pred cc----cChhcHHHHHHHHhcC
Q 024681 247 HL----SAPAIVGPVIRRALSR 264 (264)
Q Consensus 247 ~~----~~~~~~~~~i~~fl~~ 264 (264)
+. +.|+.+ +.|.+||++
T Consensus 166 ~~~~~~~~~~~~-~~i~~fl~~ 186 (191)
T 3bdv_A 166 AEAGFGPWEYGL-KRLAEFSEI 186 (191)
T ss_dssp GGGTCSSCHHHH-HHHHHHHHT
T ss_pred ccccchhHHHHH-HHHHHHHHH
Confidence 88 445554 999999864
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.8e-29 Score=181.05 Aligned_cols=183 Identities=20% Similarity=0.198 Sum_probs=140.3
Q ss_pred EEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEe--cCCCCCCCCCCCCC-Cc--ccchHHHHHHHHHHHHH
Q 024681 9 HVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMF--DLVCAGSVNPDYFD-FR--RYTTLDAYVDDLLNILD 81 (264)
Q Consensus 9 ~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~--d~~g~G~s~~~~~~-~~--~~~~~~~~~~~~~~~~~ 81 (264)
++...++ ..|+||++||++++...|..+++.| ++|.|+++ |++|+|.|...... .. ...++.+.++|+.++++
T Consensus 53 ~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 132 (251)
T 2r8b_A 53 HKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIK 132 (251)
T ss_dssp EEEECCCTTSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCcEEEEEeCCCCCHhHHHHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 3444443 5689999999999999999999999 88999999 89999987432111 11 11234444566666555
Q ss_pred Hh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 82 TL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 82 ~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
.+ +.++++++|||+||.+++.+|.++|++++++|++++......
T Consensus 133 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-------------------------------- 180 (251)
T 2r8b_A 133 ANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-------------------------------- 180 (251)
T ss_dssp HHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC--------------------------------
T ss_pred HHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc--------------------------------
Confidence 54 788999999999999999999999999999999998643210
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC--CCce
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG--GRNT 235 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~ 235 (264)
......+++|+++++|++|.+++.+..+.+.+.++ + .+
T Consensus 181 ---------------------------------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~-~~ 220 (251)
T 2r8b_A 181 ---------------------------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQG-GT 220 (251)
T ss_dssp ---------------------------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHS-SE
T ss_pred ---------------------------------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcC-Ce
Confidence 01123457899999999999999999999999887 4 45
Q ss_pred EE-EecCCCCcccccChhcHHHHHHHHhc
Q 024681 236 VE-LLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 236 ~~-~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+. .++++||.++.+.++++.+++.++|.
T Consensus 221 ~~~~~~~~gH~~~~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 221 VETVWHPGGHEIRSGEIDAVRGFLAAYGG 249 (251)
T ss_dssp EEEEEESSCSSCCHHHHHHHHHHHGGGC-
T ss_pred EEEEecCCCCccCHHHHHHHHHHHHHhcC
Confidence 54 78889999988888888877777664
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=180.80 Aligned_cols=218 Identities=13% Similarity=0.135 Sum_probs=146.7
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeEEEEec
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRCAYVGH 93 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~ 93 (264)
++++|||+||++++...|..+.+ | .+|+|+++|+||++.+.+. .+ +++++++++.++++.+. .++++|+||
T Consensus 20 ~~~~lv~lhg~~~~~~~~~~~~~-l~~~~~v~~~d~~G~~~~~~~-----~~-~~~~~~~~~~~~i~~~~~~~~~~l~Gh 92 (265)
T 3ils_A 20 ARKTLFMLPDGGGSAFSYASLPR-LKSDTAVVGLNCPYARDPENM-----NC-THGAMIESFCNEIRRRQPRGPYHLGGW 92 (265)
T ss_dssp SSEEEEEECCTTCCGGGGTTSCC-CSSSEEEEEEECTTTTCGGGC-----CC-CHHHHHHHHHHHHHHHCSSCCEEEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHh-cCCCCEEEEEECCCCCCCCCC-----CC-CHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 45799999999999999999999 9 9999999999999766532 23 59999999999999985 469999999
Q ss_pred ChhHHHHHHHHH---hCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccccc-CCCCChH-H
Q 024681 94 SVSAMIGLLASI---RRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA-VGADVPA-A 168 (264)
Q Consensus 94 S~Gg~~a~~~a~---~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~ 168 (264)
||||.+|+.+|. .+|++++++|++++........ .. .....+...+. .......... ......+ .
T Consensus 93 S~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~-----~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 162 (265)
T 3ils_A 93 SSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQ-----LP-RAFYEHCNSIG----LFATQPGASPDGSTEPPSYL 162 (265)
T ss_dssp THHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCC-----CC-HHHHHHHHHTT----TTTTSSSSCSSSCSCCCTTH
T ss_pred CHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccc-----cC-HHHHHHHHHHH----HhCCCccccccCCHHHHHHH
Confidence 999999999998 6788899999999764322111 11 11111111110 0000000000 0011111 1
Q ss_pred HHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEE-EEecCC---CCCc--------------chhhHHHHHHHc
Q 024681 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCV-IIQTSK---DVSV--------------PVSVAEYLQRHL 230 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l-~i~g~~---D~~~--------------~~~~~~~~~~~~ 230 (264)
...+... ......... ....++++|++ +++|++ |..+ +......+.+..
T Consensus 163 ~~~~~~~------------~~~~~~~~~-~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 229 (265)
T 3ils_A 163 IPHFTAV------------VDVMLDYKL-APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIM 229 (265)
T ss_dssp HHHHHHH------------HHHTTTCCC-CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHS
T ss_pred HHHHHHH------------HHHHHhcCC-CCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhC
Confidence 1111110 111111111 12347899988 999999 9887 444456666666
Q ss_pred C-CCceEEEecCCCCccc--ccChhcHHHHHHHHhc
Q 024681 231 G-GRNTVELLKIEGHLPH--LSAPAIVGPVIRRALS 263 (264)
Q Consensus 231 ~-~~~~~~~~~~~gH~~~--~~~~~~~~~~i~~fl~ 263 (264)
+ ..+++++++++||+.+ .++|+++.+.|.+||+
T Consensus 230 ~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 230 PGASFDIVRADGANHFTLMQKEHVSIISDLIDRVMA 265 (265)
T ss_dssp TTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHTC
T ss_pred CccceeEEEcCCCCcceeeChhhHHHHHHHHHHHhC
Confidence 6 2289999999999999 8999999999999984
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=177.93 Aligned_cols=182 Identities=15% Similarity=0.105 Sum_probs=136.2
Q ss_pred eeEEEEeCC--CCceEEEecCCCCChhhHHHhhhhc-CCceEEEe--cCCCCCCCCCCCC-CCcccchHHHHHH---HHH
Q 024681 7 ALHVRVVGT--GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMF--DLVCAGSVNPDYF-DFRRYTTLDAYVD---DLL 77 (264)
Q Consensus 7 ~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~--d~~g~G~s~~~~~-~~~~~~~~~~~~~---~~~ 77 (264)
.++|...|+ +.|+||++||++++...|..+.+.| .||.|+++ |++|+|.|..... ....+. ..++.+ ++.
T Consensus 26 ~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~~~d~~g~g~s~~~~~~~~~~~~-~~~~~~~~~~~~ 104 (226)
T 2h1i_A 26 MKHVFQKGKDTSKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFD-EEDLIFRTKELN 104 (226)
T ss_dssp SCEEEECCSCTTSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEEC-HHHHHHHHHHHH
T ss_pred eeEEecCCCCCCCcEEEEEecCCCChhHHHHHHHHhccCceEEEecCcccCCcchhhccccCccCcC-hhhHHHHHHHHH
Confidence 456777776 6689999999999999999999999 99999999 9999998743111 112222 444433 344
Q ss_pred HHH----HHh--CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhh
Q 024681 78 NIL----DTL--GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEA 151 (264)
Q Consensus 78 ~~~----~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
+++ +.. +.++++++|||+||.+++.+|.++|++++++|++++......
T Consensus 105 ~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------- 158 (226)
T 2h1i_A 105 EFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-------------------------- 158 (226)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS--------------------------
T ss_pred HHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc--------------------------
Confidence 444 333 447999999999999999999999999999999998633210
Q ss_pred hhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 152 WAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
......+++|+++++|++|.+++.+..+.+.+.++
T Consensus 159 ---------------------------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~ 193 (226)
T 2h1i_A 159 ---------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLE 193 (226)
T ss_dssp ---------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHH
Confidence 01122347899999999999999999999988886
Q ss_pred CC---ceEEEecCCCCcccccChhcHHHHHHHH
Q 024681 232 GR---NTVELLKIEGHLPHLSAPAIVGPVIRRA 261 (264)
Q Consensus 232 ~~---~~~~~~~~~gH~~~~~~~~~~~~~i~~f 261 (264)
+. .++ +++++||....+.++.+.+.+.++
T Consensus 194 ~~~~~~~~-~~~~~gH~~~~~~~~~~~~~l~~~ 225 (226)
T 2h1i_A 194 NANANVTM-HWENRGHQLTMGEVEKAKEWYDKA 225 (226)
T ss_dssp TTTCEEEE-EEESSTTSCCHHHHHHHHHHHHHH
T ss_pred hcCCeEEE-EeCCCCCCCCHHHHHHHHHHHHHh
Confidence 42 455 999999998766666666655554
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-28 Score=174.30 Aligned_cols=182 Identities=14% Similarity=0.179 Sum_probs=142.4
Q ss_pred eEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-C---CceEEEecCC-------------------CCCCCCCCCCCCc
Q 024681 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-N---HHRVIMFDLV-------------------CAGSVNPDYFDFR 64 (264)
Q Consensus 8 ~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~---g~~v~~~d~~-------------------g~G~s~~~~~~~~ 64 (264)
+.+...++..|+||++||++++...|..+++.| + ||.|+++|+| |+|.+.. ..
T Consensus 5 ~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~----~~ 80 (218)
T 1auo_A 5 LILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARS----IS 80 (218)
T ss_dssp EEECCSSCCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCE----EC
T ss_pred eecCCCCCCCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccc----cc
Confidence 344444456789999999999999999999888 4 9999998766 4443321 12
Q ss_pred ccchHHHHHHHHHHHHHHh---CC--CeEEEEecChhHHHHHHHHH-hCCCccceeEEecCCCCCCCCCCCCCCccHHHH
Q 024681 65 RYTTLDAYVDDLLNILDTL---GV--NRCAYVGHSVSAMIGLLASI-RRPDLFTKLILIGASPRFLNDEDYHGGFEEAEI 138 (264)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~---~~--~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 138 (264)
.+ ++++.++++..+++.+ +. ++++++|||+||.+++.+|. ++|++++++|++++.... ..+
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~---~~~--------- 147 (218)
T 1auo_A 81 LE-ELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT---FGD--------- 147 (218)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT---CCT---------
T ss_pred hH-HHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC---chh---------
Confidence 23 4888899999999887 54 48999999999999999999 999999999999985432 000
Q ss_pred HHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCc
Q 024681 139 DKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSV 218 (264)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~ 218 (264)
.... ....+++|+++++|++|.++
T Consensus 148 -----------------------~~~~---------------------------------~~~~~~~P~l~i~G~~D~~~ 171 (218)
T 1auo_A 148 -----------------------ELEL---------------------------------SASQQRIPALCLHGQYDDVV 171 (218)
T ss_dssp -----------------------TCCC---------------------------------CHHHHTCCEEEEEETTCSSS
T ss_pred -----------------------hhhh---------------------------------hhcccCCCEEEEEeCCCcee
Confidence 0000 00235789999999999999
Q ss_pred chhhHHHHHHHcCC---CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 219 PVSVAEYLQRHLGG---RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 219 ~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
|.+..+.+.+.+++ .+++++++ +||.++.+.++++.+.+.++|.
T Consensus 172 ~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 172 QNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARLG 218 (218)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHHHhC
Confidence 99999999988875 38999999 9999998888888888888773
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-27 Score=182.31 Aligned_cols=242 Identities=9% Similarity=0.080 Sum_probs=147.7
Q ss_pred CCceEEEecCCCCChhhHHH-hhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh------CCC
Q 024681 16 GDRILVLAHGFGTDQSAWQR-ILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL------GVN 86 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~-~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 86 (264)
..|+||++||++++...|.. ++..| +||.|+++|+||+|.|... ...+.+....++|+.++++.+ +.+
T Consensus 95 ~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~---~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~ 171 (367)
T 2hdw_A 95 RLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQ---PRNVASPDINTEDFSAAVDFISLLPEVNRE 171 (367)
T ss_dssp CEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCS---SSSCCCHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred CCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCc---CccccchhhHHHHHHHHHHHHHhCcCCCcC
Confidence 34789999999999888875 77888 8999999999999999753 223333666777777777766 245
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCC-CCCCCCCccHHHHHHHHHHHHh-hhhhhhhhcccc-----
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN-DEDYHGGFEEAEIDKVFRAMEA-NYEAWAYGYAPL----- 159 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----- 159 (264)
+++++|||+||.+++.+|.++| +++++|++++...... ...+.................. ....+.......
T Consensus 172 ~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 250 (367)
T 2hdw_A 172 RIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYN 250 (367)
T ss_dssp EEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTT
T ss_pred cEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchHHHHHHHHHHHHHHHHHhccCCceeecCCC
Confidence 8999999999999999999998 5999999986421000 0000111111111111111111 111111110000
Q ss_pred cCCCCChHHHHHHHHhhccc---Cch-------hhhhhhhhhcCCccccccCCcc-cCEEEEecCCCCCcchhhHHHHHH
Q 024681 160 AVGADVPAAVREFSRTLFNM---RPD-------ISLFVSKTVFDTDLRGILGLVR-VPCVIIQTSKDVSVPVSVAEYLQR 228 (264)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~ 228 (264)
.+..............+... .+. ........+...+....+.+++ +|+|+++|++|. +.+..+.+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~ 328 (367)
T 2hdw_A 251 ELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAH--SRYFSETAYA 328 (367)
T ss_dssp CCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHH
T ss_pred ccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHH
Confidence 00011111222222222110 110 0011111222334445667788 999999999999 7778888877
Q ss_pred HcCCCceEEEecCCCCcccccChhc-HHHHHHHHhc
Q 024681 229 HLGGRNTVELLKIEGHLPHLSAPAI-VGPVIRRALS 263 (264)
Q Consensus 229 ~~~~~~~~~~~~~~gH~~~~~~~~~-~~~~i~~fl~ 263 (264)
.....+++++++++||..+.+.++. +.+.+.+||+
T Consensus 329 ~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~ 364 (367)
T 2hdw_A 329 AAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFD 364 (367)
T ss_dssp HSCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHH
T ss_pred hCCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHH
Confidence 5433389999999999988777765 5899999986
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-28 Score=181.65 Aligned_cols=214 Identities=14% Similarity=0.072 Sum_probs=144.1
Q ss_pred CCCCceEEEecCC--CCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-CCCeEE
Q 024681 14 GTGDRILVLAHGF--GTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-GVNRCA 89 (264)
Q Consensus 14 g~~~p~vv~~hG~--~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 89 (264)
+.++|+|||+||+ +++...|..+++.| .+|+|+++|+||||.|... .. +++++++++.+.++.+ +.++++
T Consensus 78 ~~~~~~lv~lhG~~~~~~~~~~~~~~~~L~~~~~v~~~d~~G~G~~~~~-----~~-~~~~~~~~~~~~l~~~~~~~~~~ 151 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGPQVYSRLAEELDAGRRVSALVPPGFHGGQAL-----PA-TLTVLVRSLADVVQAEVADGEFA 151 (319)
T ss_dssp CCSSCEEEEECCSSTTCSGGGGHHHHHHHCTTSEEEEEECTTSSTTCCE-----ES-SHHHHHHHHHHHHHHHHTTSCEE
T ss_pred CCCCCeEEEECCCCcCCCHHHHHHHHHHhCCCceEEEeeCCCCCCCCCC-----CC-CHHHHHHHHHHHHHHhcCCCCEE
Confidence 3455899999995 67889999999999 9999999999999987542 12 5899999999888877 558999
Q ss_pred EEecChhHHHHHHHHHhC---CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh
Q 024681 90 YVGHSVSAMIGLLASIRR---PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP 166 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
|+||||||.+|+.+|.++ |++++++|++++.+..... . . ...+...+..........+.. . ....
T Consensus 152 lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~-----~-~---~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 219 (319)
T 3lcr_A 152 LAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG-----G-R---PEELFRSALNERFVEYLRLTG--G-GNLS 219 (319)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC-----C-H---HHHHHHHHHHHHHHHHHHHHC--C-CCHH
T ss_pred EEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc-----h-h---hHHHHHHHHHHHHhhhhcccC--C-Cchh
Confidence 999999999999999987 8889999999986432211 0 0 111111111000000000000 0 0001
Q ss_pred HHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcc
Q 024681 167 AAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLP 246 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 246 (264)
.....+.. ....... + ....+++|+++|+|++ ..+++.....+.+.+++..+++.++ ++|+.
T Consensus 220 ~~l~~~~~------------~~~~~~~--~--~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~-g~H~~ 281 (319)
T 3lcr_A 220 QRITAQVW------------CLELLRG--W--RPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAAMGQVVEAP-GDHFT 281 (319)
T ss_dssp HHHHHHHH------------HHHHTTT--C--CCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHHTCSEEEEES-SCTTG
T ss_pred HHHHHHHH------------HHHHHhc--C--CCCCcCCCEEEEEeCC-CCCCcccchhhhhcCCCCceEEEeC-CCcHH
Confidence 11111111 0111111 1 1257899999999988 4555666777777776657888888 68887
Q ss_pred ccc--ChhcHHHHHHHHhc
Q 024681 247 HLS--APAIVGPVIRRALS 263 (264)
Q Consensus 247 ~~~--~~~~~~~~i~~fl~ 263 (264)
+++ +|+++++.|.+||+
T Consensus 282 ~~~~~~~~~va~~i~~fL~ 300 (319)
T 3lcr_A 282 IIEGEHVASTAHIVGDWLR 300 (319)
T ss_dssp GGSTTTHHHHHHHHHHHHH
T ss_pred hhCcccHHHHHHHHHHHHH
Confidence 776 89999999999986
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=183.72 Aligned_cols=207 Identities=10% Similarity=0.042 Sum_probs=141.5
Q ss_pred CCceEEEecCCCCCh--hhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHH-HHHHHhCCCeEEEE
Q 024681 16 GDRILVLAHGFGTDQ--SAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL-NILDTLGVNRCAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 91 (264)
++|+|||+||++++. ..|..+...| .+|+|+++|+||||.|... .+ +++++++++. .+++.++.++++|+
T Consensus 66 ~~~~lvllhG~~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~-----~~-~~~~~a~~~~~~l~~~~~~~~~~Lv 139 (300)
T 1kez_A 66 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPL-----PS-SMAAVAAVQADAVIRTQGDKPFVVA 139 (300)
T ss_dssp CSSEEEECCCSSTTCSTTTTHHHHHHTSSSCCBCCCCCTTSSTTCCB-----CS-SHHHHHHHHHHHHHHHCSSCCEEEE
T ss_pred CCCeEEEECCCcccCcHHHHHHHHHhcCCCceEEEecCCCCCCCCCC-----CC-CHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 457999999999977 9999999999 8899999999999998643 23 4899999988 46677788899999
Q ss_pred ecChhHHHHHHHHHhCC---CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHH
Q 024681 92 GHSVSAMIGLLASIRRP---DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAA 168 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
||||||.+|+.+|.++| ++++++|++++...... .....+...+ ...+............
T Consensus 140 GhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~----------~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 202 (300)
T 1kez_A 140 GHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQ----------DAMNAWLEEL-------TATLFDRETVRMDDTR 202 (300)
T ss_dssp CCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTC----------HHHHHHHHHH-------HGGGCCCCSSCCCHHH
T ss_pred EECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcch----------hHHHHHHHHH-------HHHHHhCcCCccchHH
Confidence 99999999999999988 48999999998643211 0111111111 1111110000000111
Q ss_pred HHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
...+ ........ .+ ...++++|+++|+|+ |..+++.. ..+.+.+++..+++++++ ||+.++
T Consensus 203 ~~~~------------~~~~~~~~--~~--~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~~~~~~~~i~g-gH~~~~ 263 (300)
T 1kez_A 203 LTAL------------GAYDRLTG--QW--RPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWPFEHDTVAVPG-DHFTMV 263 (300)
T ss_dssp HHHH------------HHHHHHTT--TC--CCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCSSCCEEEEESS-CTTTSS
T ss_pred HHHH------------HHHHHHHh--cC--CCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcCCCCeEEEecC-CChhhc
Confidence 1100 00111110 11 246789999999995 55555444 345555554378999998 999986
Q ss_pred -cChhcHHHHHHHHhcC
Q 024681 249 -SAPAIVGPVIRRALSR 264 (264)
Q Consensus 249 -~~~~~~~~~i~~fl~~ 264 (264)
++|+++.+.|.+||++
T Consensus 264 ~e~~~~~~~~i~~fl~~ 280 (300)
T 1kez_A 264 QEHADAIARHIDAWLGG 280 (300)
T ss_dssp SSCSHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHHh
Confidence 8999999999999964
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=180.09 Aligned_cols=188 Identities=12% Similarity=0.077 Sum_probs=141.8
Q ss_pred CCCCceEEEecCC---CCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC---
Q 024681 14 GTGDRILVLAHGF---GTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--- 85 (264)
Q Consensus 14 g~~~p~vv~~hG~---~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 85 (264)
+++.|+||++||. +++...|..+++.| .||+|+++|+||+|.. ++.+.++|+.++++.+..
T Consensus 60 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~-----------~~~~~~~d~~~~~~~l~~~~~ 128 (262)
T 2pbl_A 60 GTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEV-----------RISEITQQISQAVTAAAKEID 128 (262)
T ss_dssp SSCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTS-----------CHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCC-----------ChHHHHHHHHHHHHHHHHhcc
Confidence 3456899999995 47888999999988 8999999999998642 377788888888887744
Q ss_pred CeEEEEecChhHHHHHHHHHhC------CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccc
Q 024681 86 NRCAYVGHSVSAMIGLLASIRR------PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPL 159 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
++++++||||||.+++.+|.++ |++++++|++++....... .... ....
T Consensus 129 ~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~---~~~~---------------~~~~------- 183 (262)
T 2pbl_A 129 GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPL---LRTS---------------MNEK------- 183 (262)
T ss_dssp SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGG---GGST---------------THHH-------
T ss_pred CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHH---Hhhh---------------hhhh-------
Confidence 6999999999999999999988 8899999999985332100 0000 0000
Q ss_pred cCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEe
Q 024681 160 AVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELL 239 (264)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 239 (264)
........ ...+....+.++++|+++++|++|.+++.+.++.+.+.++ ++++++
T Consensus 184 -----------------~~~~~~~~-------~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~ 237 (262)
T 2pbl_A 184 -----------------FKMDADAA-------IAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD--ADHVIA 237 (262)
T ss_dssp -----------------HCCCHHHH-------HHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT--CEEEEE
T ss_pred -----------------hCCCHHHH-------HhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC--CeEEEe
Confidence 00000000 0011122346778999999999999999999999999998 799999
Q ss_pred cCCCCcccccChhcHHHHHHHHhc
Q 024681 240 KIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 240 ~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++||+.+.+++++....+.+++-
T Consensus 238 ~~~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 238 FEKHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp TTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred CCCCcchHHhhcCCCCcHHHHHHh
Confidence 999999999999888888887764
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=185.68 Aligned_cols=216 Identities=12% Similarity=0.055 Sum_probs=147.4
Q ss_pred ceeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 5 LEALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 5 ~~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
+....|...+. ..|+||++||++++...|......| +||.|+++|+||+|.|... ....+ ++.+.+.++.+++.
T Consensus 139 i~~~l~~p~~~~~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~--~~~~~-~~~~~~~~~~~~l~ 215 (386)
T 2jbw_A 139 MPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEY--KRIAG-DYEKYTSAVVDLLT 215 (386)
T ss_dssp EEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTT--CCSCS-CHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCCCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCC--CCCCc-cHHHHHHHHHHHHH
Confidence 33333434443 3479999999999887666666666 9999999999999998321 12233 47778888888888
Q ss_pred H---hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc
Q 024681 82 T---LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP 158 (264)
Q Consensus 82 ~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
. ++.++++++|||+||.+++.+|.+ |++++++|++ +......... .+.. .... ...+
T Consensus 216 ~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~---~~~~-~~~~--------~~~~------ 275 (386)
T 2jbw_A 216 KLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD---LETP-LTKE--------SWKY------ 275 (386)
T ss_dssp HCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG---GSCH-HHHH--------HHHH------
T ss_pred hCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH---hccH-HHHH--------HHHH------
Confidence 7 455799999999999999999998 8899999999 7543321110 0000 0000 0000
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc-CCCceEE
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL-GGRNTVE 237 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~ 237 (264)
.+...... ... ...+...+....+.++++|+|+++|++|. ++.+.++.+.+.+ +..++++
T Consensus 276 -~~g~~~~~---------------~~~--~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~ 336 (386)
T 2jbw_A 276 -VSKVDTLE---------------EAR--LHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLV 336 (386)
T ss_dssp -HTTCSSHH---------------HHH--HHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEE
T ss_pred -HhCCCCHH---------------HHH--HHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEE
Confidence 00000000 000 01111123334466788999999999999 8999999999999 6238999
Q ss_pred EecCCCCcccccChhcHHHHHHHHhc
Q 024681 238 LLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 238 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++||.. .++++++.+.|.+||+
T Consensus 337 ~~~~~gH~~-~~~~~~~~~~i~~fl~ 361 (386)
T 2jbw_A 337 VEKDGDHCC-HNLGIRPRLEMADWLY 361 (386)
T ss_dssp EETTCCGGG-GGGTTHHHHHHHHHHH
T ss_pred EeCCCCcCC-ccchHHHHHHHHHHHH
Confidence 999999965 5788899999999986
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-27 Score=169.36 Aligned_cols=166 Identities=16% Similarity=0.095 Sum_probs=129.0
Q ss_pred CceEEEecCCC---C--ChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CC
Q 024681 17 DRILVLAHGFG---T--DQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GV 85 (264)
Q Consensus 17 ~p~vv~~hG~~---~--~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 85 (264)
+|+||++||++ + ....|..+++.| +||.|+++|+||+|.|..... ......+|+.++++.+ +.
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~------~~~~~~~d~~~~~~~l~~~~~~ 110 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD------HGDGEQDDLRAVAEWVRAQRPT 110 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCC------TTTHHHHHHHHHHHHHHHHCTT
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCcc------cCchhHHHHHHHHHHHHhcCCC
Confidence 68999999953 2 345578888888 699999999999999975421 1234455555555544 45
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
++++++|||+||.+++.++.++ +++++|++++......
T Consensus 111 ~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~---------------------------------------- 148 (220)
T 2fuk_A 111 DTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD---------------------------------------- 148 (220)
T ss_dssp SEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC----------------------------------------
T ss_pred CcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh----------------------------------------
Confidence 6999999999999999999887 7999999998643211
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc-CCCceEEEecCCCC
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL-GGRNTVELLKIEGH 244 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH 244 (264)
...+. ...|+++++|++|.++|.+..+.+.+.+ ++ +++++++++||
T Consensus 149 -------------------------------~~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H 195 (220)
T 2fuk_A 149 -------------------------------FSDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLEQQ-PTLVRMPDTSH 195 (220)
T ss_dssp -------------------------------CTTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCSSC-CEEEEETTCCT
T ss_pred -------------------------------hhhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhCcC-CcEEEeCCCCc
Confidence 00011 1579999999999999999999999998 55 89999999999
Q ss_pred cccccChhcHHHHHHHHhcC
Q 024681 245 LPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 245 ~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+.. .++++.+.+.+||++
T Consensus 196 ~~~~-~~~~~~~~i~~~l~~ 214 (220)
T 2fuk_A 196 FFHR-KLIDLRGALQHGVRR 214 (220)
T ss_dssp TCTT-CHHHHHHHHHHHHGG
T ss_pred eehh-hHHHHHHHHHHHHHH
Confidence 9887 477888888888763
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-27 Score=170.47 Aligned_cols=175 Identities=17% Similarity=0.249 Sum_probs=137.2
Q ss_pred eCCCCceEEEecCCCCChhhHHHhhhhc----CCceEEEecCC-------------------CCCCCCCCCCCCcccchH
Q 024681 13 VGTGDRILVLAHGFGTDQSAWQRILPYL----NHHRVIMFDLV-------------------CAGSVNPDYFDFRRYTTL 69 (264)
Q Consensus 13 ~g~~~p~vv~~hG~~~~~~~~~~~~~~l----~g~~v~~~d~~-------------------g~G~s~~~~~~~~~~~~~ 69 (264)
.++..|+||++||++++...|..+++.| .||.|+++|+| |+|.+.. ...+ ++
T Consensus 20 ~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~----~~~~-~~ 94 (226)
T 3cn9_A 20 APNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARA----IDED-QL 94 (226)
T ss_dssp CTTCCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTC----BCHH-HH
T ss_pred CCCCCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccccc----ccch-hH
Confidence 3445689999999999999999988887 49999997766 5554322 1223 58
Q ss_pred HHHHHHHHHHHHHh---CC--CeEEEEecChhHHHHHHHHH-hCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTL---GV--NRCAYVGHSVSAMIGLLASI-RRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFR 143 (264)
Q Consensus 70 ~~~~~~~~~~~~~~---~~--~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (264)
++.++++..+++.+ +. ++++++|||+||.+++.+|. ++|++++++|++++......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~------------------ 156 (226)
T 3cn9_A 95 NASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFD------------------ 156 (226)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGG------------------
T ss_pred HHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCch------------------
Confidence 88999999999887 65 59999999999999999999 99999999999998432100
Q ss_pred HHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH
Q 024681 144 AMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA 223 (264)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 223 (264)
. + . -....+++|+++++|++|.++|.+..
T Consensus 157 -------~----~---------------------~-------------------~~~~~~~~P~lii~G~~D~~~~~~~~ 185 (226)
T 3cn9_A 157 -------D----L---------------------A-------------------LDERHKRIPVLHLHGSQDDVVDPALG 185 (226)
T ss_dssp -------G----C---------------------C-------------------CCTGGGGCCEEEEEETTCSSSCHHHH
T ss_pred -------h----h---------------------h-------------------hcccccCCCEEEEecCCCCccCHHHH
Confidence 0 0 0 00134688999999999999999999
Q ss_pred HHHHHHcCC---CceEEEecCCCCcccccChhcHHHHHHHHh
Q 024681 224 EYLQRHLGG---RNTVELLKIEGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 224 ~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 262 (264)
+.+.+.+++ .+++++++ +||.++.+.++++.+++.++|
T Consensus 186 ~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 186 RAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKRL 226 (226)
T ss_dssp HHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCceeEEEec-CCCCcchhhHHHHHHHHHhhC
Confidence 999888873 27999999 999998877776666666543
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-27 Score=170.86 Aligned_cols=183 Identities=12% Similarity=0.046 Sum_probs=136.4
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcc-------cchHHHHHHHHHHHHHHhC---
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRR-------YTTLDAYVDDLLNILDTLG--- 84 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--- 84 (264)
.|+||++||++++...|..+++.| +||.|+++|++|+|.+.....+... -.+.....+|+.++++.+.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 111 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG 111 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc
Confidence 479999999999999999999999 8999999999999877542111110 0124567888888888763
Q ss_pred --CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
.++++++|||+||.+++.++.++|+ +.+++++.+........
T Consensus 112 ~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~~----------------------------------- 155 (241)
T 3f67_A 112 GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKSL----------------------------------- 155 (241)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCCS-----------------------------------
T ss_pred CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCcc-----------------------------------
Confidence 3589999999999999999999987 77777766532110000
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc----CCCceEEE
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL----GGRNTVEL 238 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~ 238 (264)
....+....+.++++|+++++|++|.++|.+..+.+.+.+ ++ +++.+
T Consensus 156 ----------------------------~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~-~~~~~ 206 (241)
T 3f67_A 156 ----------------------------NSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANAT-AEIVV 206 (241)
T ss_dssp ----------------------------SSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCS-EEEEE
T ss_pred ----------------------------CCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCC-cEEEE
Confidence 0001111234556899999999999999999998888887 44 89999
Q ss_pred ecCCCCccccc--------ChhcHHHHHHHHhcC
Q 024681 239 LKIEGHLPHLS--------APAIVGPVIRRALSR 264 (264)
Q Consensus 239 ~~~~gH~~~~~--------~~~~~~~~i~~fl~~ 264 (264)
+++++|.+..+ ..+++.+.+.+||++
T Consensus 207 ~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 207 YPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp ETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 99999987643 236678889999874
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.4e-27 Score=164.69 Aligned_cols=182 Identities=12% Similarity=-0.070 Sum_probs=123.1
Q ss_pred ceEEEecCCCCChhhHH--Hhhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 18 RILVLAHGFGTDQSAWQ--RILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~--~~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
|+||++||+.++...+. .+.+.+ .+|+|+++|+||+|. +..+++..+++....++++|+
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~---------------~~~~~l~~~~~~~~~~~i~l~ 67 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPA---------------EAAEMLESIVMDKAGQSIGIV 67 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHH---------------HHHHHHHHHHHHHTTSCEEEE
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHH---------------HHHHHHHHHHHhcCCCcEEEE
Confidence 79999999998876553 333444 579999999999863 346677778888888999999
Q ss_pred ecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 92 GHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
||||||.+|+.+|.++|..+..++...++.. . ........... ...........
T Consensus 68 G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~---------------------~----~~~~~~~~~~~-~~~~~~~~~~~ 121 (202)
T 4fle_A 68 GSSLGGYFATWLSQRFSIPAVVVNPAVRPFE---------------------L----LSDYLGENQNP-YTGQKYVLESR 121 (202)
T ss_dssp EETHHHHHHHHHHHHTTCCEEEESCCSSHHH---------------------H----GGGGCEEEECT-TTCCEEEECHH
T ss_pred EEChhhHHHHHHHHHhcccchheeeccchHH---------------------H----HHHhhhhhccc-cccccccchHH
Confidence 9999999999999999987766655443210 0 00000000000 00000000000
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccCh
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAP 251 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 251 (264)
.... .........++++|+|+|+|++|.++|.+.+.++. ++ +++.+++|+||.+ +.+
T Consensus 122 ~~~~-----------------~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~---~~-~~l~i~~g~~H~~--~~~ 178 (202)
T 4fle_A 122 HIYD-----------------LKAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY---TP-CRQTVESGGNHAF--VGF 178 (202)
T ss_dssp HHHH-----------------HHTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT---TT-SEEEEESSCCTTC--TTG
T ss_pred HHHH-----------------HHhhhhhhhccCceEEEEEeCCCCCCCHHHHHHHh---hC-CEEEEECCCCcCC--CCH
Confidence 0000 00112335677899999999999999998887664 56 8999999999964 567
Q ss_pred hcHHHHHHHHhc
Q 024681 252 AIVGPVIRRALS 263 (264)
Q Consensus 252 ~~~~~~i~~fl~ 263 (264)
+++.+.|.+||+
T Consensus 179 ~~~~~~I~~FL~ 190 (202)
T 4fle_A 179 DHYFSPIVTFLG 190 (202)
T ss_dssp GGGHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 888999999996
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-26 Score=172.35 Aligned_cols=220 Identities=13% Similarity=0.068 Sum_probs=139.7
Q ss_pred EEEEeCC-CCceEEEecCCCCC-hhhHHHhhhhc-CCceEEEecCCCCCCCCCCCC---------------CCcccchHH
Q 024681 9 HVRVVGT-GDRILVLAHGFGTD-QSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYF---------------DFRRYTTLD 70 (264)
Q Consensus 9 ~~~~~g~-~~p~vv~~hG~~~~-~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~---------------~~~~~~~~~ 70 (264)
.|...++ ..|+||++||++++ ...|....... .||.|+++|+||+|.|..... +...|. +.
T Consensus 73 ~~~P~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 151 (318)
T 1l7a_A 73 YAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYY-YR 151 (318)
T ss_dssp EEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCH-HH
T ss_pred EEeeCCCCCccEEEEEcCCCCCCCCCcccccchhhCCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHH-HH
Confidence 3444443 34789999999999 88888777555 999999999999999965311 012222 56
Q ss_pred HHHHHHHHHHHHhC------CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHH
Q 024681 71 AYVDDLLNILDTLG------VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRA 144 (264)
Q Consensus 71 ~~~~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (264)
...+|+.++++.+. .++++++|||+||.+++.+|.++|+ ++++|+++|.... . ......
T Consensus 152 ~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~-----------~---~~~~~~ 216 (318)
T 1l7a_A 152 GVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN-----------F---ERAIDV 216 (318)
T ss_dssp HHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC-----------H---HHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccC-----------H---HHHHhc
Confidence 67777777777662 2689999999999999999999886 8888887764211 0 000000
Q ss_pred HHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHH
Q 024681 145 MEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAE 224 (264)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 224 (264)
. . ... ......+..... .+.............+....+.++++|+++++|++|.++|.+..+
T Consensus 217 -~-~-------------~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~ 278 (318)
T 1l7a_A 217 -A-L-------------EQP-YLEINSFFRRNG--SPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVF 278 (318)
T ss_dssp -C-C-------------STT-TTHHHHHHHHSC--CHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred -C-C-------------cCc-cHHHHHHHhccC--CcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHH
Confidence 0 0 000 000111111100 011111111112222333445677899999999999999999999
Q ss_pred HHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHh
Q 024681 225 YLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 262 (264)
.+.+.+++.+++++++++||....+..+.+.+.+.++|
T Consensus 279 ~~~~~l~~~~~~~~~~~~~H~~~~~~~~~~~~fl~~~l 316 (318)
T 1l7a_A 279 AAYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFKQIL 316 (318)
T ss_dssp HHHHHCCSSEEEEEETTCCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCCeeEEEccCCCCCCcchhHHHHHHHHHHHh
Confidence 99999986589999999999944333344444444443
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=176.57 Aligned_cols=212 Identities=14% Similarity=0.049 Sum_probs=136.8
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCC--C--------------------CCcccchHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDY--F--------------------DFRRYTTLDAY 72 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~--~--------------------~~~~~~~~~~~ 72 (264)
..|+||++||++++...+....... .||.|+++|+||+|.|.... . +...|. +...
T Consensus 94 ~~p~vv~~HG~g~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~-~~~~ 172 (337)
T 1vlq_A 94 KLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYY-YRRV 172 (337)
T ss_dssp SEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCH-HHHH
T ss_pred CccEEEEEcCCCCCCCCchhhcchhhCCCEEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhH-HHHH
Confidence 3479999999998866554444344 99999999999999764310 0 111232 5677
Q ss_pred HHHHHHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH
Q 024681 73 VDDLLNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME 146 (264)
Q Consensus 73 ~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
.+|+.++++.+ +.++++++|||+||.+++.+|.+.| +++++|+.+|.... . ..... ..
T Consensus 173 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~-----------~---~~~~~-~~ 236 (337)
T 1vlq_A 173 FTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH-----------F---RRAVQ-LV 236 (337)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC-----------H---HHHHH-HC
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcccC-----------H---HHHHh-cC
Confidence 88888888776 2358999999999999999999998 59999998874321 0 00000 00
Q ss_pred hhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHH
Q 024681 147 ANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYL 226 (264)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 226 (264)
. .........+... .+.........+...+....+.++++|+|+++|+.|.++|++..+.+
T Consensus 237 ~---------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~ 297 (337)
T 1vlq_A 237 D---------------THPYAEITNFLKT----HRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAA 297 (337)
T ss_dssp C---------------CTTHHHHHHHHHH----CTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHH
T ss_pred C---------------CcchHHHHHHHHh----CchhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHH
Confidence 0 0000000001000 01111111111222233345567889999999999999999999999
Q ss_pred HHHcCCCceEEEecCCCCccc-ccChhcHHHHHHHHhc
Q 024681 227 QRHLGGRNTVELLKIEGHLPH-LSAPAIVGPVIRRALS 263 (264)
Q Consensus 227 ~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~ 263 (264)
.+.++..+++.+++++||... .+..+++.+.+.++|+
T Consensus 298 ~~~l~~~~~~~~~~~~gH~~~~~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 298 YNYYAGPKEIRIYPYNNHEGGGSFQAVEQVKFLKKLFE 335 (337)
T ss_dssp HHHCCSSEEEEEETTCCTTTTHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCCcEEEEcCCCCCCCcchhhHHHHHHHHHHHHh
Confidence 999986588999999999853 3344556666666654
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-26 Score=169.91 Aligned_cols=193 Identities=13% Similarity=0.052 Sum_probs=125.3
Q ss_pred CCceEEEecC---CCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHH---HHHHHHhCC--
Q 024681 16 GDRILVLAHG---FGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDL---LNILDTLGV-- 85 (264)
Q Consensus 16 ~~p~vv~~hG---~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-- 85 (264)
..|+||++|| .+++...|..++..| .||.|+++|+||+|.+.. .. +. ..++..+.+ .+..+.++.
T Consensus 34 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~-~~-~~---~~~d~~~~~~~l~~~~~~~~~~~ 108 (277)
T 3bxp_A 34 DYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQS-VY-PW---ALQQLGATIDWITTQASAHHVDC 108 (277)
T ss_dssp CEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCC-CT-TH---HHHHHHHHHHHHHHHHHHHTEEE
T ss_pred CccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCc-cC-ch---HHHHHHHHHHHHHhhhhhcCCCh
Confidence 4589999999 667778899999988 899999999999984432 11 11 133333333 333333333
Q ss_pred CeEEEEecChhHHHHHHHHHhC--------------CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhh
Q 024681 86 NRCAYVGHSVSAMIGLLASIRR--------------PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEA 151 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~--------------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
++++++|||+||.+|+.+|.++ +.+++++|+++|....... +... .
T Consensus 109 ~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~--~~~~---~--------------- 168 (277)
T 3bxp_A 109 QRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAG--FPTT---S--------------- 168 (277)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSS--SSSS---H---------------
T ss_pred hheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCC--CCCc---c---------------
Confidence 5899999999999999999985 6789999999986432111 0000 0
Q ss_pred hhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 152 WAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
... ..+.. .....+....+.++.+|+|+++|++|.++|.+.++.+.+.++
T Consensus 169 ----------------~~~---~~~~~-----------~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~ 218 (277)
T 3bxp_A 169 ----------------AAR---NQITT-----------DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAML 218 (277)
T ss_dssp ----------------HHH---HHHCS-----------CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHH
T ss_pred ----------------ccc---hhccc-----------hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHH
Confidence 000 00000 001112223355667899999999999999988888887764
Q ss_pred C---CceEEEecCCCCcccccC---------------hhcHHHHHHHHhc
Q 024681 232 G---RNTVELLKIEGHLPHLSA---------------PAIVGPVIRRALS 263 (264)
Q Consensus 232 ~---~~~~~~~~~~gH~~~~~~---------------~~~~~~~i~~fl~ 263 (264)
+ .++++++++++|.+.... ++++.+.+.+||+
T Consensus 219 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 268 (277)
T 3bxp_A 219 QHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQ 268 (277)
T ss_dssp HTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHH
Confidence 3 168999999999554443 4677888888885
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=181.08 Aligned_cols=222 Identities=11% Similarity=0.054 Sum_probs=141.0
Q ss_pred CcceeeEEEEeCC-CCceEEEecCCCCCh-hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 3 DLLEALHVRVVGT-GDRILVLAHGFGTDQ-SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 3 ~~~~~~~~~~~g~-~~p~vv~~hG~~~~~-~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
..+....|...++ ..|+||++||++++. ..|..+...| .||+|+++|+||+|.|...... . +.+....++.+
T Consensus 178 ~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~---~-~~~~~~~~v~~ 253 (415)
T 3mve_A 178 GKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLT---E-DYSRLHQAVLN 253 (415)
T ss_dssp SEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCC---S-CTTHHHHHHHH
T ss_pred EEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCC---C-CHHHHHHHHHH
Confidence 3344444444443 358999999999985 4566666777 8999999999999999753211 1 25556667777
Q ss_pred HHHHhC---CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhh
Q 024681 79 ILDTLG---VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG 155 (264)
Q Consensus 79 ~~~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
.+.... .++++++|||+||.+++.+|..+|++++++|++++....... ...+...
T Consensus 254 ~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~----------------------~~~~~~~ 311 (415)
T 3mve_A 254 ELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFA----------------------SPQKLQQ 311 (415)
T ss_dssp HGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHH----------------------CHHHHTT
T ss_pred HHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccc----------------------cHHHHHH
Confidence 766654 468999999999999999999999999999999986321000 0000000
Q ss_pred cccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCcccc--c--cCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRG--I--LGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
. .....................+.......+... . ..++++|+|+++|++|.++|.+..+.+.+..+
T Consensus 312 ~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~ 382 (415)
T 3mve_A 312 M---------PKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFST 382 (415)
T ss_dssp S---------CHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHHTBT
T ss_pred h---------HHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 0 000000000000000000001111111111111 1 36789999999999999999999999999888
Q ss_pred CCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 232 GRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+ ++++++++..+ .+.++++.+.+.+||+
T Consensus 383 ~-~~l~~i~g~~~---h~~~~~~~~~i~~fL~ 410 (415)
T 3mve_A 383 Y-GKAKKISSKTI---TQGYEQSLDLAIKWLE 410 (415)
T ss_dssp T-CEEEEECCCSH---HHHHHHHHHHHHHHHH
T ss_pred C-ceEEEecCCCc---ccchHHHHHHHHHHHH
Confidence 8 89999997322 2356777778888875
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-27 Score=174.63 Aligned_cols=196 Identities=13% Similarity=0.030 Sum_probs=133.2
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC--CeE
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--NRC 88 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 88 (264)
..|+||++||.+ ++...|..++..| .||.|+++|+||+|.+... ......+....++.+.+..+.++. +++
T Consensus 49 ~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~--~~~~~~d~~~~~~~l~~~~~~~~~~~~~i 126 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQPL--GLAPVLDLGRAVNLLRQHAAEWHIDPQQI 126 (283)
T ss_dssp CEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCSSC--BTHHHHHHHHHHHHHHHSHHHHTEEEEEE
T ss_pred CCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccccC--chhHHHHHHHHHHHHHHHHHHhCCCcccE
Confidence 457999999944 5667789999999 7999999999999987310 011111233333333333344444 489
Q ss_pred EEEecChhHHHHHHHHHhCCCc-------------cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhh
Q 024681 89 AYVGHSVSAMIGLLASIRRPDL-------------FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG 155 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~~-------------v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
+++|||+||.+|+.+|.++|++ ++++|+++|....... +.... ..+
T Consensus 127 ~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~------~~~~~------------~~~--- 185 (283)
T 3bjr_A 127 TPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLG------FPKDD------------ATL--- 185 (283)
T ss_dssp EEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSB------C----------------------
T ss_pred EEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccc------ccccc------------chH---
Confidence 9999999999999999999987 8999999875432110 00000 000
Q ss_pred cccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC--
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-- 233 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-- 233 (264)
...+. .....+....+.++.+|+++++|++|.++|.+..+.+.+.+++.
T Consensus 186 --~~~~~---------------------------~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~ 236 (283)
T 3bjr_A 186 --ATWTP---------------------------TPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKI 236 (283)
T ss_dssp ---CCCC---------------------------CGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTC
T ss_pred --HHHHH---------------------------HhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCC
Confidence 00000 00111223345677899999999999999999888888877542
Q ss_pred -ceEEEecCCCCcccccCh-------------hcHHHHHHHHhc
Q 024681 234 -NTVELLKIEGHLPHLSAP-------------AIVGPVIRRALS 263 (264)
Q Consensus 234 -~~~~~~~~~gH~~~~~~~-------------~~~~~~i~~fl~ 263 (264)
+++++++++||.+..+.+ +++.+.+.+||+
T Consensus 237 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 280 (283)
T 3bjr_A 237 PYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLA 280 (283)
T ss_dssp CEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHH
T ss_pred CeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHh
Confidence 689999999997666554 778899999986
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=164.57 Aligned_cols=168 Identities=18% Similarity=0.133 Sum_probs=124.5
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEec-------------CCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFD-------------LVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d-------------~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
+.| ||++||++++...|..+++.| .++.|+++| ++|+|.+.... ....++...++++.++++
T Consensus 16 ~~p-vv~lHG~g~~~~~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~---~~~~~~~~~~~~~~~~~~ 91 (209)
T 3og9_A 16 LAP-LLLLHSTGGDEHQLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKEN---FDLESLDEETDWLTDEVS 91 (209)
T ss_dssp SCC-EEEECCTTCCTTTTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGG---BCHHHHHHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCCHHHHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCC---CCHHHHHHHHHHHHHHHH
Confidence 557 999999999999999999999 999999999 77777654321 111134555555555554
Q ss_pred ----HhCC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhh
Q 024681 82 ----TLGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG 155 (264)
Q Consensus 82 ----~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
..++ ++++++||||||.+++.+|.++|++++++|++++......
T Consensus 92 ~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------ 141 (209)
T 3og9_A 92 LLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------------------ 141 (209)
T ss_dssp HHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC------------------------------
T ss_pred HHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc------------------------------
Confidence 4455 7899999999999999999999999999999997422000
Q ss_pred cccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC--
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-- 233 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-- 233 (264)
.......++|+++++|++|.++|.+..+.+.+.+++.
T Consensus 142 -----------------------------------------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~ 180 (209)
T 3og9_A 142 -----------------------------------------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGC 180 (209)
T ss_dssp -----------------------------------------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTC
T ss_pred -----------------------------------------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCC
Confidence 0001235789999999999999999988888877532
Q ss_pred -ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 234 -NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 234 -~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++.+++ +||.+..+. .+.+.+||+
T Consensus 181 ~~~~~~~~-~gH~~~~~~----~~~~~~~l~ 206 (209)
T 3og9_A 181 QLEIYESS-LGHQLTQEE----VLAAKKWLT 206 (209)
T ss_dssp EEEEEECS-STTSCCHHH----HHHHHHHHH
T ss_pred ceEEEEcC-CCCcCCHHH----HHHHHHHHH
Confidence 6777787 899875443 345555553
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=169.00 Aligned_cols=167 Identities=14% Similarity=0.080 Sum_probs=129.4
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH--------HhCC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD--------TLGV 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 85 (264)
..|+||++||++++...|..+++.| .||.|+++|+||.+.. . +.....+.+.+... .++.
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s~~~-------~---~~~~~~~~l~~~~~~~~~~~~~~~~~ 117 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTG-------R---EMLACLDYLVRENDTPYGTYSGKLNT 117 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCCTTS-------H---HHHHHHHHHHHHHHSSSSTTTTTEEE
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCCccH-------H---HHHHHHHHHHhcccccccccccccCc
Confidence 4589999999999999999999999 7999999999963111 1 24444455544433 4455
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
++++++||||||.+++.+| .++++++++++++.... .
T Consensus 118 ~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~-------------------------------------~---- 154 (258)
T 2fx5_A 118 GRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG-------------------------------------L---- 154 (258)
T ss_dssp EEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS-------------------------------------T----
T ss_pred cceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc-------------------------------------c----
Confidence 7899999999999999988 55789999999873210 0
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHHHHcCCCceEEEecCCCC
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQRHLGGRNTVELLKIEGH 244 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH 244 (264)
......+.++++|+|+++|++|.++|.+. .+.+.+.....+++++++++||
T Consensus 155 ----------------------------~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H 206 (258)
T 2fx5_A 155 ----------------------------GHDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSH 206 (258)
T ss_dssp ----------------------------TCCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCT
T ss_pred ----------------------------ccchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCC
Confidence 00012345678999999999999999886 7777777533388999999999
Q ss_pred cccccChhcHHHHHHHHhc
Q 024681 245 LPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 245 ~~~~~~~~~~~~~i~~fl~ 263 (264)
+.+.++++++.+.+.+||+
T Consensus 207 ~~~~~~~~~~~~~i~~fl~ 225 (258)
T 2fx5_A 207 FEPVGSGGAYRGPSTAWFR 225 (258)
T ss_dssp TSSTTTCGGGHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHH
Confidence 9999999999999999986
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-25 Score=166.13 Aligned_cols=202 Identities=11% Similarity=0.117 Sum_probs=137.1
Q ss_pred CCceEEEecCCC-----CChhhHHHhhhhc------CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 16 GDRILVLAHGFG-----TDQSAWQRILPYL------NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 16 ~~p~vv~~hG~~-----~~~~~~~~~~~~l------~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+.|+||++||.+ ++...|..+++.| .||.|+++|+|+.+.+... . .+++..+.+..+++.++
T Consensus 40 ~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~------~-~~~d~~~~~~~l~~~~~ 112 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNP------R-NLYDAVSNITRLVKEKG 112 (273)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTT------H-HHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCCC------c-HHHHHHHHHHHHHHhCC
Confidence 568999999955 4567888887754 7999999999987654321 2 47788888888888888
Q ss_pred CCeEEEEecChhHHHHHHHHHhC-----------------CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRR-----------------PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA 147 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~-----------------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
.++++++|||+||.+|+.+|.++ |++++++|++++.... ... ... ..
T Consensus 113 ~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~------------~~~---~~~-~~ 176 (273)
T 1vkh_A 113 LTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSL------------KEL---LIE-YP 176 (273)
T ss_dssp CCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCH------------HHH---HHH-CG
T ss_pred cCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccH------------HHh---hhh-cc
Confidence 89999999999999999999886 7889999999875321 000 000 00
Q ss_pred hhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHH
Q 024681 148 NYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ 227 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 227 (264)
....+..... ..... ... ........ ........+++|+++++|++|.++|.+.++.+.
T Consensus 177 ~~~~~~~~~~----~~~~~-----------~~~-~~~~~~~~-----~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~ 235 (273)
T 1vkh_A 177 EYDCFTRLAF----PDGIQ-----------MYE-EEPSRVMP-----YVKKALSRFSIDMHLVHSYSDELLTLRQTNCLI 235 (273)
T ss_dssp GGHHHHHHHC----TTCGG-----------GCC-CCHHHHHH-----HHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHH
T ss_pred cHHHHHHHHh----ccccc-----------chh-hcccccCh-----hhhhcccccCCCEEEEecCCcCCCChHHHHHHH
Confidence 0000000000 00000 000 00000000 000111226789999999999999999999888
Q ss_pred HHcCC---CceEEEecCCCCcccccChhcHHHHHHHHh
Q 024681 228 RHLGG---RNTVELLKIEGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 228 ~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 262 (264)
+.+++ .+++++++++||..+.++ +++.+.|.+||
T Consensus 236 ~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 236 SCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred HHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 87753 278999999999999888 88999999987
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=170.57 Aligned_cols=191 Identities=10% Similarity=0.019 Sum_probs=133.7
Q ss_pred CCceEEEecCC---CCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-------
Q 024681 16 GDRILVLAHGF---GTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL------- 83 (264)
Q Consensus 16 ~~p~vv~~hG~---~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 83 (264)
..|+||++||. .++...|..++..| +||.|+++|+||+|.|.... +.....+|+.++++.+
T Consensus 42 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~-------~~~~~~~d~~~~~~~l~~~~~~~ 114 (276)
T 3hxk_A 42 TFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYN-------FLSQNLEEVQAVFSLIHQNHKEW 114 (276)
T ss_dssp CBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSC-------THHHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCCC-------cCchHHHHHHHHHHHHHHhHHHc
Confidence 34899999994 35677788888888 89999999999999976321 2334444444444332
Q ss_pred --CCCeEEEEecChhHHHHHHHHHh-CCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccccc
Q 024681 84 --GVNRCAYVGHSVSAMIGLLASIR-RPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA 160 (264)
Q Consensus 84 --~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
+.++++++|||+||.+++.+|.+ .+.+++++|+++|.............+ .. .
T Consensus 115 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~-----------------------~~-~ 170 (276)
T 3hxk_A 115 QINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSDLSH-----------------------FN-F 170 (276)
T ss_dssp TBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSSSSS-----------------------SC-C
T ss_pred CCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcchhh-----------------------hh-c
Confidence 34699999999999999999998 788999999999864432210000000 00 0
Q ss_pred CCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEE
Q 024681 161 VGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVE 237 (264)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~ 237 (264)
+ .... ...+....+.++.+|+++++|++|.++|.+.++.+.+.+++. ++++
T Consensus 171 ~-------------------~~~~-------~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~ 224 (276)
T 3hxk_A 171 E-------------------IENI-------SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAH 224 (276)
T ss_dssp C-------------------CSCC-------GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEE
T ss_pred C-------------------chhh-------hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEE
Confidence 0 0000 011222345667899999999999999999998888887542 5899
Q ss_pred EecCCCCcccccCh-------------hcHHHHHHHHhc
Q 024681 238 LLKIEGHLPHLSAP-------------AIVGPVIRRALS 263 (264)
Q Consensus 238 ~~~~~gH~~~~~~~-------------~~~~~~i~~fl~ 263 (264)
+++++||.+....+ +++.+.+.+||+
T Consensus 225 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~ 263 (276)
T 3hxk_A 225 FFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLE 263 (276)
T ss_dssp EESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHH
T ss_pred EECCCCCCccccCccccccccccCchHHHHHHHHHHHHH
Confidence 99999997766544 677888888875
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-26 Score=170.81 Aligned_cols=215 Identities=15% Similarity=0.067 Sum_probs=135.6
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc-C--CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC--Ce
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL-N--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--NR 87 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l-~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 87 (264)
+.|+||++||.+ ++...|..++..| . ||.|+++|+||+|.+..+ ....+....++++.+.++.++. ++
T Consensus 72 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~----~~~~d~~~~~~~l~~~~~~~~~d~~~ 147 (311)
T 2c7b_A 72 GLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFP----TAVEDAYAALKWVADRADELGVDPDR 147 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCTT----HHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCCC----ccHHHHHHHHHHHHhhHHHhCCCchh
Confidence 347999999988 8889999999998 3 999999999999998543 2222355566666666666666 68
Q ss_pred EEEEecChhHHHHHHHHHhCCC----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPD----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
++++|||+||.+|+.+|.++|+ +++++|+++|....... ... .... ... .....
T Consensus 148 i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~------~~~-~~~~--------~~~----~~~~~--- 205 (311)
T 2c7b_A 148 IAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGV------PTA-SLVE--------FGV----AETTS--- 205 (311)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSC------CCH-HHHH--------HHH----CTTCS---
T ss_pred EEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccc------ccc-CCcc--------HHH----hccCC---
Confidence 9999999999999999988775 49999999986432110 000 0000 000 00000
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH--HHHHHHcCCCceEEEecC
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA--EYLQRHLGGRNTVELLKI 241 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~ 241 (264)
........+...+......... .........+..+. |+++++|++|.+++.... +.+.+.... ++++++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~p~~~~l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~~g~~-~~~~~~~g 278 (311)
T 2c7b_A 206 LPIELMVWFGRQYLKRPEEAYD-----FKASPLLADLGGLP-PALVVTAEYDPLRDEGELYAYKMKASGSR-AVAVRFAG 278 (311)
T ss_dssp SCHHHHHHHHHHHCSSTTGGGS-----TTTCGGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCC-EEEEEETT
T ss_pred CCHHHHHHHHHHhCCCCccccC-----cccCcccccccCCC-cceEEEcCCCCchHHHHHHHHHHHHCCCC-EEEEEeCC
Confidence 1111222222222211110000 00011112344444 999999999999874422 344444445 89999999
Q ss_pred CCCccc-----ccChhcHHHHHHHHhc
Q 024681 242 EGHLPH-----LSAPAIVGPVIRRALS 263 (264)
Q Consensus 242 ~gH~~~-----~~~~~~~~~~i~~fl~ 263 (264)
++|.+. .+.++++.+.+.+||+
T Consensus 279 ~~H~~~~~~~~~~~~~~~~~~i~~fl~ 305 (311)
T 2c7b_A 279 MVHGFVSFYPFVDAGREALDLAAASIR 305 (311)
T ss_dssp CCTTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred CccccccccccCHHHHHHHHHHHHHHH
Confidence 999765 3455788888888885
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-26 Score=164.01 Aligned_cols=179 Identities=16% Similarity=0.158 Sum_probs=130.0
Q ss_pred eEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCC---CCCC--CCCCcccchHHHHHHHHHH
Q 024681 8 LHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGS---VNPD--YFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 8 ~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~---s~~~--~~~~~~~~~~~~~~~~~~~ 78 (264)
++|....+ .+|+||++||++++...|..+.+.| ++|.|+++|.+++.. +... ........++.+.++++.+
T Consensus 18 l~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (223)
T 3b5e_A 18 FPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAA 97 (223)
T ss_dssp SCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHH
T ss_pred ceEEEeCCCCCCCCEEEEEecCCCCHHHHHHHHHhcCCCceEEEeCCCCCcCCccccccccCCCcccHHHHHHHHHHHHH
Confidence 44544432 4589999999999999999999999 999999999887421 1100 0000112235666777777
Q ss_pred HHHHh----CC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhh
Q 024681 79 ILDTL----GV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAW 152 (264)
Q Consensus 79 ~~~~~----~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (264)
+++.+ ++ ++++++|||+||.+|+.+|.++|++++++|++++.....
T Consensus 98 ~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~---------------------------- 149 (223)
T 3b5e_A 98 FTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD---------------------------- 149 (223)
T ss_dssp HHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS----------------------------
T ss_pred HHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc----------------------------
Confidence 66654 43 689999999999999999999999999999999853210
Q ss_pred hhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC
Q 024681 153 AYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232 (264)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 232 (264)
. . .....+++|+++++|++|.++|.+..+ +.+.+++
T Consensus 150 -----------~----------------~----------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~ 185 (223)
T 3b5e_A 150 -----------H----------------V----------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSR 185 (223)
T ss_dssp -----------S----------------C----------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHH
T ss_pred -----------c----------------c----------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHH
Confidence 0 0 011235789999999999999999888 8887763
Q ss_pred ---CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 233 ---RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 233 ---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+++++++ +||.+..+..+ .+.+||+
T Consensus 186 ~g~~~~~~~~~-~gH~~~~~~~~----~i~~~l~ 214 (223)
T 3b5e_A 186 HGAEVDARIIP-SGHDIGDPDAA----IVRQWLA 214 (223)
T ss_dssp TTCEEEEEEES-CCSCCCHHHHH----HHHHHHH
T ss_pred CCCceEEEEec-CCCCcCHHHHH----HHHHHHH
Confidence 27899999 99998755444 5555554
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-25 Score=160.33 Aligned_cols=190 Identities=15% Similarity=0.083 Sum_probs=136.1
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-C------CceEEEecCCCCCCCC--------------CCCCCCc
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-N------HHRVIMFDLVCAGSVN--------------PDYFDFR 64 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~------g~~v~~~d~~g~G~s~--------------~~~~~~~ 64 (264)
..+.+...++..|+||++||++++...|..+...| . +++|+++|.|+++.+. .......
T Consensus 12 ~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 91 (239)
T 3u0v_A 12 QRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPE 91 (239)
T ss_dssp CEEEECCSSCCCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCC
T ss_pred CceecCCCCCCCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCccccc
Confidence 34444444556789999999999999998888776 3 6999998886532110 0000112
Q ss_pred ccchHHHHHHHHHHHHHHh-----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHH
Q 024681 65 RYTTLDAYVDDLLNILDTL-----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEID 139 (264)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 139 (264)
...++++.++++..+++.. +.++++|+||||||.+|+.+|.++|++++++|++++...... .
T Consensus 92 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~----------~--- 158 (239)
T 3u0v_A 92 HLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKAS----------A--- 158 (239)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTC----------H---
T ss_pred chhhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchh----------H---
Confidence 2225888889999888873 557999999999999999999999999999999998532100 0
Q ss_pred HHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccC-EEEEecCCCCCc
Q 024681 140 KVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVP-CVIIQTSKDVSV 218 (264)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~ 218 (264)
..... . .....+| +++++|++|.++
T Consensus 159 ----------------------------~~~~~-~-------------------------~~~~~~pp~li~~G~~D~~v 184 (239)
T 3u0v_A 159 ----------------------------VYQAL-Q-------------------------KSNGVLPELFQCHGTADELV 184 (239)
T ss_dssp ----------------------------HHHHH-H-------------------------HCCSCCCCEEEEEETTCSSS
T ss_pred ----------------------------HHHHH-H-------------------------hhccCCCCEEEEeeCCCCcc
Confidence 00000 0 1123556 999999999999
Q ss_pred chhhHHHHHHHcCC---CceEEEecCCCCcccccChhcHHHHHHHHh
Q 024681 219 PVSVAEYLQRHLGG---RNTVELLKIEGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 219 ~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 262 (264)
|.+..+.+.+.++. .+++.+++++||.+..+..+.+.+++.++|
T Consensus 185 ~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 231 (239)
T 3u0v_A 185 LHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTKL 231 (239)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHHHHhC
Confidence 99888888877752 279999999999988666666666666655
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-25 Score=159.74 Aligned_cols=191 Identities=17% Similarity=0.172 Sum_probs=137.2
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CC---ceEEEecCCCCCCCC--C----CCCC----------CcccchHHHHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NH---HRVIMFDLVCAGSVN--P----DYFD----------FRRYTTLDAYVDD 75 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g---~~v~~~d~~g~G~s~--~----~~~~----------~~~~~~~~~~~~~ 75 (264)
.+||||+||++++...|..+++.| .+ ++|+.+|.+++|.+. . .... ...|.++++.+++
T Consensus 4 ~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~~ 83 (250)
T 3lp5_A 4 MAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVW 83 (250)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHHH
Confidence 468999999999999999999999 44 789998888887631 1 0000 1224358888999
Q ss_pred HHHHHHHh----CCCeEEEEecChhHHHHHHHHHhC-----CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH
Q 024681 76 LLNILDTL----GVNRCAYVGHSVSAMIGLLASIRR-----PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME 146 (264)
Q Consensus 76 ~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
+.++++.+ +.++++++||||||.+++.++.++ |++|+++|+++++........
T Consensus 84 l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~------------------ 145 (250)
T 3lp5_A 84 LNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTST------------------ 145 (250)
T ss_dssp HHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCS------------------
T ss_pred HHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccc------------------
Confidence 99888887 788999999999999999999887 678999999998643321100
Q ss_pred hhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecC----CCCCcchhh
Q 024681 147 ANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTS----KDVSVPVSV 222 (264)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~----~D~~~~~~~ 222 (264)
... ....+.+.. ....+++ ++|+++|+|+ .|.++|.+.
T Consensus 146 ---------------~~~-~~~~~~l~~---------------------~~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~s 187 (250)
T 3lp5_A 146 ---------------TAK-TSMFKELYR---------------------YRTGLPE-SLTVYSIAGTENYTSDGTVPYNS 187 (250)
T ss_dssp ---------------SCC-CHHHHHHHH---------------------TGGGSCT-TCEEEEEECCCCCCTTTBCCHHH
T ss_pred ---------------ccc-CHHHHHHHh---------------------ccccCCC-CceEEEEEecCCCCCCceeeHHH
Confidence 000 001111110 0122232 7899999999 899999999
Q ss_pred HHHHHHHcCCC-ce--EEEec--CCCCcccccChhcHHHHHHHHhcC
Q 024681 223 AEYLQRHLGGR-NT--VELLK--IEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 223 ~~~~~~~~~~~-~~--~~~~~--~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++.+...+++. .. ...+. +++|..+.++| ++.+.|.+||.+
T Consensus 188 a~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~ 233 (250)
T 3lp5_A 188 VNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQYLLA 233 (250)
T ss_dssp HTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTSC
T ss_pred HHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHHHHhc
Confidence 98888877653 22 23343 47799999988 799999999963
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=183.66 Aligned_cols=205 Identities=14% Similarity=0.107 Sum_probs=138.9
Q ss_pred CCceEEEecCCCCC--hhhHHHhhhhc--CCceEEEecCCC---CCCCCCC--CCCCcccchHHHHHHHHHHHHHHhCCC
Q 024681 16 GDRILVLAHGFGTD--QSAWQRILPYL--NHHRVIMFDLVC---AGSVNPD--YFDFRRYTTLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 16 ~~p~vv~~hG~~~~--~~~~~~~~~~l--~g~~v~~~d~~g---~G~s~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (264)
..|+||++||.+.+ ...|..+++.| +||.|+++|+|| +|.+... ....... .++++.+.+..+++....+
T Consensus 359 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~-~~~d~~~~~~~l~~~~~~d 437 (582)
T 3o4h_A 359 PGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGG-ELEDVSAAARWARESGLAS 437 (582)
T ss_dssp SEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTH-HHHHHHHHHHHHHHTTCEE
T ss_pred CCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcccc-cHHHHHHHHHHHHhCCCcc
Confidence 45899999997766 67788888888 899999999999 6655211 0011112 2555555555555554445
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP 166 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
+++++|||+||.+++.+|.++|++++++|++++.... ..+..........+..
T Consensus 438 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~---------------~~~~~~~~~~~~~~~~------------ 490 (582)
T 3o4h_A 438 ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDW---------------EEMYELSDAAFRNFIE------------ 490 (582)
T ss_dssp EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCH---------------HHHHHTCCHHHHHHHH------------
T ss_pred eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCH---------------HHHhhcccchhHHHHH------------
Confidence 9999999999999999999999999999999985321 0000000000000100
Q ss_pred HHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---CceEEEecCCC
Q 024681 167 AAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTVELLKIEG 243 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~g 243 (264)
......... +...+....+.++++|+|+++|++|..+|++..+.+++.++. .+++++++++|
T Consensus 491 --------~~~~~~~~~-------~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~g 555 (582)
T 3o4h_A 491 --------QLTGGSREI-------MRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAG 555 (582)
T ss_dssp --------HHTTTCHHH-------HHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCC
T ss_pred --------HHcCcCHHH-------HHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 000000000 001122234566789999999999999999999998888754 27899999999
Q ss_pred Cccc-ccChhcHHHHHHHHhc
Q 024681 244 HLPH-LSAPAIVGPVIRRALS 263 (264)
Q Consensus 244 H~~~-~~~~~~~~~~i~~fl~ 263 (264)
|.+. .++++++.+.+.+||+
T Consensus 556 H~~~~~~~~~~~~~~i~~fl~ 576 (582)
T 3o4h_A 556 HAINTMEDAVKILLPAVFFLA 576 (582)
T ss_dssp SSCCBHHHHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHH
Confidence 9887 5677888899998885
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=152.73 Aligned_cols=190 Identities=13% Similarity=0.115 Sum_probs=131.7
Q ss_pred cceeeEEEEeCC----CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCC--CCcccchHHHHHHH
Q 024681 4 LLEALHVRVVGT----GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYF--DFRRYTTLDAYVDD 75 (264)
Q Consensus 4 ~~~~~~~~~~g~----~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~ 75 (264)
......+...|. .+++||++||+|++...|..+++.| .++.|+++|.+|++.-+.... .......+++..+.
T Consensus 5 ~~h~~~~~~~g~P~~~a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~ 84 (210)
T 4h0c_A 5 YTHSKQIITSGVPVQRAKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALAL 84 (210)
T ss_dssp CCCCCCEEEEESCTTTCSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHH
T ss_pred eecCccceeCCCCcccCCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHH
Confidence 333444555553 3579999999999999999999999 899999999998764221110 11112234555555
Q ss_pred HHHHHHH---hCC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhh
Q 024681 76 LLNILDT---LGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYE 150 (264)
Q Consensus 76 ~~~~~~~---~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
+..+++. .++ ++++++|+|+||.+++.++.++|+++.++|.+++........
T Consensus 85 i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~----------------------- 141 (210)
T 4h0c_A 85 VGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA----------------------- 141 (210)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC-----------------------
T ss_pred HHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh-----------------------
Confidence 5555443 333 589999999999999999999999999999998632100000
Q ss_pred hhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 151 AWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
. .... ....++|++++||++|+++|.+..+++.+.+
T Consensus 142 ------------------------------~------------~~~~--~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L 177 (210)
T 4h0c_A 142 ------------------------------I------------GNYK--GDFKQTPVFISTGNPDPHVPVSRVQESVTIL 177 (210)
T ss_dssp ------------------------------G------------GGCC--BCCTTCEEEEEEEESCTTSCHHHHHHHHHHH
T ss_pred ------------------------------h------------hhhh--hhccCCceEEEecCCCCccCHHHHHHHHHHH
Confidence 0 0000 0112579999999999999999888877766
Q ss_pred CC---CceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 231 GG---RNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 231 ~~---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.. .++++++|+.||.+. +++ .+.+.+||.+
T Consensus 178 ~~~g~~v~~~~ypg~gH~i~---~~e-l~~i~~wL~k 210 (210)
T 4h0c_A 178 EDMNAAVSQVVYPGRPHTIS---GDE-IQLVNNTILK 210 (210)
T ss_dssp HHTTCEEEEEEEETCCSSCC---HHH-HHHHHHTTTC
T ss_pred HHCCCCeEEEEECCCCCCcC---HHH-HHHHHHHHcC
Confidence 42 278899999999764 444 4678888865
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=164.81 Aligned_cols=214 Identities=13% Similarity=0.021 Sum_probs=133.5
Q ss_pred eCCCCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC
Q 024681 13 VGTGDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 13 ~g~~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (264)
.+.+.|+||++||.+ ++...|..++..| .||+|+++|+||.+... ... .+++..+.+..+++.++.+
T Consensus 92 ~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~------~~~-~~~d~~~~~~~l~~~~~~~ 164 (326)
T 3d7r_A 92 RHQIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH------IDD-TFQAIQRVYDQLVSEVGHQ 164 (326)
T ss_dssp TTCCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC------HHH-HHHHHHHHHHHHHHHHCGG
T ss_pred CCCCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC------chH-HHHHHHHHHHHHHhccCCC
Confidence 334568999999954 4677788888887 48999999999865432 112 3677777778888888888
Q ss_pred eEEEEecChhHHHHHHHHHhCCCc----cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDL----FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
+++|+|||+||.+|+.+|.++|++ ++++|+++|........... ... .. . . .. .
T Consensus 165 ~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~---~~~-~~---~-~-----------~~-~-- 222 (326)
T 3d7r_A 165 NVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDI---SDA-LI---E-Q-----------DA-V-- 222 (326)
T ss_dssp GEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTC---CHH-HH---H-H-----------CS-S--
T ss_pred cEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhH---Hhh-hc---c-c-----------Cc-c--
Confidence 999999999999999999988776 99999999864432111100 000 00 0 0 00 0
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh--hHHHHHHHcCCCceEEEec
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS--VAEYLQRHLGGRNTVELLK 240 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~ 240 (264)
........+...+....... ... .......+.. -.|+++++|++|..++.. ..+.+.+..++ +++++++
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~l~~~~~~-~~~~~~~ 293 (326)
T 3d7r_A 223 -LSQFGVNEIMKKWANGLPLT-DKR-----ISPINGTIEG-LPPVYMFGGGREMTHPDMKLFEQMMLQHHQY-IEFYDYP 293 (326)
T ss_dssp -CCHHHHHHHHHHHHTTSCTT-STT-----TSGGGSCCTT-CCCEEEEEETTSTTHHHHHHHHHHHHHTTCC-EEEEEET
T ss_pred -cCHHHHHHHHHHhcCCCCCC-CCe-----ECcccCCccc-CCCEEEEEeCcccchHHHHHHHHHHHHCCCc-EEEEEeC
Confidence 00001111111111000000 000 0000111222 259999999999865421 23334444445 7999999
Q ss_pred CCCCcccc---cChhcHHHHHHHHhcC
Q 024681 241 IEGHLPHL---SAPAIVGPVIRRALSR 264 (264)
Q Consensus 241 ~~gH~~~~---~~~~~~~~~i~~fl~~ 264 (264)
+++|.++. +.++++.+.+.+||++
T Consensus 294 g~~H~~~~~~~~~~~~~~~~i~~fl~~ 320 (326)
T 3d7r_A 294 KMVHDFPIYPIRQSHKAIKQIAKSIDE 320 (326)
T ss_dssp TCCTTGGGSSSHHHHHHHHHHHHHHTS
T ss_pred CCcccccccCCHHHHHHHHHHHHHHHH
Confidence 99998877 7888999999999964
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.8e-25 Score=166.04 Aligned_cols=214 Identities=15% Similarity=0.036 Sum_probs=136.6
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC--e
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN--R 87 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 87 (264)
..|+||++||++ ++...|..++..| .||.|+++|+||+|+|..+ ....+..+.++++.+.++.++.+ +
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p----~~~~d~~~~~~~l~~~~~~~~~d~~~ 153 (311)
T 1jji_A 78 DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFP----AAVYDCYDATKWVAENAEELRIDPSK 153 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTT----HHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCCC----CcHHHHHHHHHHHHhhHHHhCCCchh
Confidence 458999999998 7888899999888 5999999999999998643 22224666677777777777765 8
Q ss_pred EEEEecChhHHHHHHHHHhCCCc----cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPDL----FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~~----v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
++++|||+||.+|+.+|.+.|++ ++++|+++|........ .... .. ..... .
T Consensus 154 i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~--------~~~~-----------~~----~~~~~-~ 209 (311)
T 1jji_A 154 IFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPT--------PSLL-----------EF----GEGLW-I 209 (311)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCC--------HHHH-----------HT----SSSCS-S
T ss_pred EEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCC--------ccHH-----------Hh----cCCCc-c
Confidence 99999999999999999887765 99999999865432110 0000 00 00000 0
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh--hHHHHHHHcCCCceEEEecC
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS--VAEYLQRHLGGRNTVELLKI 241 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~ 241 (264)
........+...+............. .....+..+ .|+++++|+.|.+++.. ..+.+.+.... ++++++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~~~l~~~-~P~li~~G~~D~l~~~~~~~~~~l~~~g~~-~~~~~~~g 282 (311)
T 1jji_A 210 LDQKIMSWFSEQYFSREEDKFNPLAS-----VIFADLENL-PPALIITAEYDPLRDEGEVFGQMLRRAGVE-ASIVRYRG 282 (311)
T ss_dssp CCHHHHHHHHHHHCSSGGGGGCTTTS-----GGGSCCTTC-CCEEEEEEEECTTHHHHHHHHHHHHHTTCC-EEEEEEEE
T ss_pred CCHHHHHHHHHHhCCCCccCCCcccC-----cccccccCC-ChheEEEcCcCcchHHHHHHHHHHHHcCCC-EEEEEECC
Confidence 01111222222221111000000000 011223333 49999999999998633 23445444455 89999999
Q ss_pred CCCccccc-----ChhcHHHHHHHHhcC
Q 024681 242 EGHLPHLS-----APAIVGPVIRRALSR 264 (264)
Q Consensus 242 ~gH~~~~~-----~~~~~~~~i~~fl~~ 264 (264)
++|.+... ..+++.+.+.+||++
T Consensus 283 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 283 VLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred CCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 99977653 347888899999864
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-25 Score=167.09 Aligned_cols=221 Identities=14% Similarity=0.110 Sum_probs=147.7
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-CCCeEEEEec
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-GVNRCAYVGH 93 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~ 93 (264)
.+|+|+|+||++++...|..+++.| .+|+|+++|+||+|.+... .. +++++++++.+.+..+ ..++++|+||
T Consensus 100 ~~~~l~~lhg~~~~~~~~~~l~~~L~~~~~v~~~d~~g~~~~~~~-----~~-~~~~~a~~~~~~i~~~~~~~~~~l~G~ 173 (329)
T 3tej_A 100 NGPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQT-----AA-NLDEVCEAHLATLLEQQPHGPYYLLGY 173 (329)
T ss_dssp SSCEEEEECCTTSCCGGGGGGGGTSCTTCEEEEECCCTTTSHHHH-----CS-SHHHHHHHHHHHHHHHCSSSCEEEEEE
T ss_pred CCCcEEEEeCCcccchHHHHHHHhcCCCCeEEEeeCCCCCCCCCC-----CC-CHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 3479999999999999999999999 9999999999999887431 11 5899999988888776 4579999999
Q ss_pred ChhHHHHHHHHHh---CCCccceeEEecCCCCCCC--CCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHH
Q 024681 94 SVSAMIGLLASIR---RPDLFTKLILIGASPRFLN--DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAA 168 (264)
Q Consensus 94 S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
||||.+|+.+|.+ +|++|.+++++++.+.... .................. ....+.... ........
T Consensus 174 S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~~~~ 245 (329)
T 3tej_A 174 SLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINR----EREAFLAAQ----QGSTSTEL 245 (329)
T ss_dssp THHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHH----HHHHHHHTT----CCCSCCHH
T ss_pred ccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHH----HHHHHHHhc----cccccHHH
Confidence 9999999999999 9999999999998654311 000000011111111110 111111100 01111111
Q ss_pred HHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
...+...+. ........ .....+++|++++.|++|...+.+....+.+..++ .+++.++ +||+.+.
T Consensus 246 ~~~~~~~~~--------~~~~~~~~----~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~~-~~~~~v~-g~H~~~~ 311 (329)
T 3tej_A 246 FTTIEGNYA--------DAVRLLTT----AHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAE-LDIYRQD-CAHVDII 311 (329)
T ss_dssp HHHHHHHHH--------HHHHHHTT----CCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEEE-EEEEEES-SCGGGGG
T ss_pred HHHHHHHHH--------HHHHHHhc----CCCCCcCCCeEEEEeccCCCCCCCchhhHHHhcCC-cEEEEec-CChHHhC
Confidence 111111110 00000001 11346789999999999988777666777777766 8999998 8999888
Q ss_pred cCh--hcHHHHHHHHhcC
Q 024681 249 SAP--AIVGPVIRRALSR 264 (264)
Q Consensus 249 ~~~--~~~~~~i~~fl~~ 264 (264)
+.| +.+.+.|.+||++
T Consensus 312 ~~~~~~~ia~~l~~~L~~ 329 (329)
T 3tej_A 312 SPGTFEKIGPIIRATLNR 329 (329)
T ss_dssp STTTHHHHHHHHHHHHCC
T ss_pred CChHHHHHHHHHHHHhcC
Confidence 877 7899999999864
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=168.44 Aligned_cols=216 Identities=13% Similarity=0.065 Sum_probs=125.8
Q ss_pred CCceEEEecCCCC---Ch--hhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-----
Q 024681 16 GDRILVLAHGFGT---DQ--SAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT----- 82 (264)
Q Consensus 16 ~~p~vv~~hG~~~---~~--~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----- 82 (264)
..|+||++||.+. +. ..|..++..| .||.|+++|+||++.+..+ . .+++..+.+..+.+.
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~----~---~~~d~~~~~~~l~~~~~~~~ 154 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLP----A---AYDDAMEALQWIKDSRDEWL 154 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCTT----H---HHHHHHHHHHHHHTCCCHHH
T ss_pred CceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCCc----h---HHHHHHHHHHHHHhCCcchh
Confidence 3479999999772 22 2388888877 6899999999998766421 1 234444444433332
Q ss_pred ---hCCCeEEEEecChhHHHHHHHHHhCCC--------ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhh
Q 024681 83 ---LGVNRCAYVGHSVSAMIGLLASIRRPD--------LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEA 151 (264)
Q Consensus 83 ---~~~~~~~l~G~S~Gg~~a~~~a~~~p~--------~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
++.++++|+|||+||.+|+.+|.++|+ +++++|+++|........ ..... .
T Consensus 155 ~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~-------~~~~~-------~---- 216 (338)
T 2o7r_A 155 TNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRT-------GSELR-------L---- 216 (338)
T ss_dssp HHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCC-------HHHHH-------T----
T ss_pred hccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCC-------hhhhc-------c----
Confidence 333689999999999999999999887 899999999864322110 00000 0
Q ss_pred hhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCc---cccccCCcccCEEEEecCCCCCcchh--hHHHH
Q 024681 152 WAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTD---LRGILGLVRVPCVIIQTSKDVSVPVS--VAEYL 226 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~P~l~i~g~~D~~~~~~--~~~~~ 226 (264)
..... ........+....................... ....+..+.+|+|+++|++|.+++.. ..+.+
T Consensus 217 ----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l 289 (338)
T 2o7r_A 217 ----ANDSR---LPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERL 289 (338)
T ss_dssp ----TTCSS---SCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHHH
T ss_pred ----CCCcc---cCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchHHHHHHHHHH
Confidence 00000 00001111111110000000000000000000 01223335669999999999998743 23344
Q ss_pred HHHcCCCceEEEecCCCCcccccCh---hcHHHHHHHHhcC
Q 024681 227 QRHLGGRNTVELLKIEGHLPHLSAP---AIVGPVIRRALSR 264 (264)
Q Consensus 227 ~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 264 (264)
.+..++ +++++++++||.++.++| +++.+.+.+||++
T Consensus 290 ~~~~~~-~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~ 329 (338)
T 2o7r_A 290 EKKGVD-VVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVD 329 (338)
T ss_dssp HHTTCE-EEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC-
T ss_pred HHCCCc-EEEEEECCCceEEeccChHHHHHHHHHHHHHHHh
Confidence 444344 799999999998887776 8899999999863
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.3e-25 Score=167.68 Aligned_cols=225 Identities=12% Similarity=-0.046 Sum_probs=135.3
Q ss_pred CceEEEecCCC---CChh--hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEE
Q 024681 17 DRILVLAHGFG---TDQS--AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCA 89 (264)
Q Consensus 17 ~p~vv~~hG~~---~~~~--~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (264)
.|+||++||.+ ++.. .|..+...| .||.|+++|+||+|.|++.........+.....+.+.+.++.++.++++
T Consensus 109 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~ 188 (361)
T 1jkm_A 109 LPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSGVV 188 (361)
T ss_dssp EEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCCCCCccHHHHHHHHHHHHhhHHhcCCCeEE
Confidence 38999999977 7777 888888888 8999999999999766432111111223344455555555666777999
Q ss_pred EEecChhHHHHHHHHHh-----CCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 90 YVGHSVSAMIGLLASIR-----RPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~-----~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
|+|||+||.+++.++.. .|++++++|++++....... ........ ....+... ... ..
T Consensus 189 l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~------~~~~~~~~-------~~~~~~~~-~~~---~~ 251 (361)
T 1jkm_A 189 VQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYA------WDHERRLT-------ELPSLVEN-DGY---FI 251 (361)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTT------SCHHHHHH-------HCTHHHHT-TTS---SS
T ss_pred EEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccc------cccccccc-------cCcchhhc-cCc---cc
Confidence 99999999999999988 88899999999986432110 00000000 00011110 000 01
Q ss_pred ChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---CceEEEecC
Q 024681 165 VPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTVELLKI 241 (264)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~ 241 (264)
.......+...+............... ......+..+. |+|+++|++|.+++ ..+.+++.+++ .++++++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~l~~l~-P~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~l~~~~g 326 (361)
T 1jkm_A 252 ENGGMALLVRAYDPTGEHAEDPIAWPY--FASEDELRGLP-PFVVAVNELDPLRD--EGIAFARRLARAGVDVAARVNIG 326 (361)
T ss_dssp CHHHHHHHHHHHSSSSTTTTCTTTCGG--GCCHHHHTTCC-CEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETT
T ss_pred CHHHHHHHHHHhCCCCCCCCCcccCcc--ccChhhHcCCC-ceEEEEcCcCcchh--hHHHHHHHHHHcCCCEEEEEeCC
Confidence 111222222222211110000000000 00123345566 99999999999987 45555555432 169999999
Q ss_pred CCCccc-c-----cCh-hcHHHHHHHHhc
Q 024681 242 EGHLPH-L-----SAP-AIVGPVIRRALS 263 (264)
Q Consensus 242 ~gH~~~-~-----~~~-~~~~~~i~~fl~ 263 (264)
++|.+. . +.. +++.+.+.+||+
T Consensus 327 ~~H~~~~~~~~~~~~~~~~~~~~i~~fl~ 355 (361)
T 1jkm_A 327 LVHGADVIFRHWLPAALESTVRDVAGFAA 355 (361)
T ss_dssp CCTTHHHHSGGGCHHHHHHHHHHHHHHHH
T ss_pred CccCccccccccccHHHHHHHHHHHHHHH
Confidence 999877 3 334 778889999986
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=176.37 Aligned_cols=218 Identities=11% Similarity=0.027 Sum_probs=133.6
Q ss_pred EEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC--
Q 024681 10 VRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-- 84 (264)
Q Consensus 10 ~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 84 (264)
|...++ ..|+||++||.+++. +..++..| +||.|+++|+||+|.+... ...+. .+++.+.+..+.+..+
T Consensus 150 ~~P~~~~~~P~Vv~~hG~~~~~--~~~~a~~La~~Gy~V~a~D~rG~g~~~~~---~~~~~-~~d~~~~~~~l~~~~~v~ 223 (422)
T 3k2i_A 150 FLPPGPGPFPGIIDIFGIGGGL--LEYRASLLAGHGFATLALAYYNFEDLPNN---MDNIS-LEYFEEAVCYMLQHPQVK 223 (422)
T ss_dssp EECSSSCCBCEEEEECCTTCSC--CCHHHHHHHTTTCEEEEEECSSSTTSCSS---CSCEE-THHHHHHHHHHHTSTTBC
T ss_pred EcCCCCCCcCEEEEEcCCCcch--hHHHHHHHHhCCCEEEEEccCCCCCCCCC---cccCC-HHHHHHHHHHHHhCcCcC
Confidence 333443 348999999998764 33457777 8999999999999988653 22233 6666666666555543
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
.++++++||||||.+|+.+|.++|+ ++++|++++............... ................
T Consensus 224 ~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 288 (422)
T 3k2i_A 224 GPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSS--------------IPPLGYDLRRIKVAFS 288 (422)
T ss_dssp CSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEE--------------ECCCCBCGGGCEECTT
T ss_pred CCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCc--------------CCCcccchhhcccCcc
Confidence 4799999999999999999999998 999999998643211110000000 0000000000000000
Q ss_pred ChHHHHHHHHhhcccCchhhhhhhhh---hcCCccccccCCcccCEEEEecCCCCCcchhhH-HHHHHHcCC---C-ceE
Q 024681 165 VPAAVREFSRTLFNMRPDISLFVSKT---VFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA-EYLQRHLGG---R-NTV 236 (264)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~---~-~~~ 236 (264)
........+.. ....+....+.++++|+|+++|++|.++|.+.. +.+.+.+++ . +++
T Consensus 289 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l 353 (422)
T 3k2i_A 289 ---------------GLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQI 353 (422)
T ss_dssp ---------------SCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEE
T ss_pred ---------------hhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEE
Confidence 00000000000 001112233567899999999999999998754 455555432 1 689
Q ss_pred EEecCCCCcc----------------------------cccChhcHHHHHHHHhc
Q 024681 237 ELLKIEGHLP----------------------------HLSAPAIVGPVIRRALS 263 (264)
Q Consensus 237 ~~~~~~gH~~----------------------------~~~~~~~~~~~i~~fl~ 263 (264)
++++++||.+ +.+.++++.+.+.+||+
T Consensus 354 ~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~ 408 (422)
T 3k2i_A 354 ICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFC 408 (422)
T ss_dssp EEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999987 22456778888888885
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-24 Score=162.69 Aligned_cols=207 Identities=16% Similarity=0.039 Sum_probs=127.2
Q ss_pred CCceEEEecC---CCCChhhHHHhhhhc-C--CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH---Hh-CC
Q 024681 16 GDRILVLAHG---FGTDQSAWQRILPYL-N--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD---TL-GV 85 (264)
Q Consensus 16 ~~p~vv~~hG---~~~~~~~~~~~~~~l-~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~ 85 (264)
..|+||++|| +.++...|..++..| + ||.|+++|+||+|++..+ . ..++..+.+..+.+ .+ +.
T Consensus 89 ~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p----~---~~~d~~~~~~~l~~~~~~lgd~ 161 (323)
T 3ain_A 89 PYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFP----A---AVVDSFDALKWVYNNSEKFNGK 161 (323)
T ss_dssp CCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT----H---HHHHHHHHHHHHHHTGGGGTCT
T ss_pred CCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCCc----c---hHHHHHHHHHHHHHhHHHhCCC
Confidence 4589999999 457888999999999 4 999999999999987532 1 23444444444433 33 46
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCcc---ceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLF---TKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v---~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
++++++|||+||.+|+.+|.++|+++ +++|+++|....... ...... . ....
T Consensus 162 ~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~--------~~~~~~----~----------~~~~--- 216 (323)
T 3ain_A 162 YGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLI--------TKSLYD----N----------GEGF--- 216 (323)
T ss_dssp TCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSC--------CHHHHH----H----------SSSS---
T ss_pred ceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCC--------CccHHH----h----------ccCC---
Confidence 79999999999999999999888766 899999886432111 000000 0 0000
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc----CCCceEEE
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL----GGRNTVEL 238 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~ 238 (264)
.........+...+............ ......+..+. |+++++|+.|.+++ ....+++.+ .+ +++++
T Consensus 217 ~l~~~~~~~~~~~~~~~~~~~~~~~~-----sp~~~~l~~l~-P~lii~G~~D~l~~--~~~~~a~~l~~ag~~-~~~~~ 287 (323)
T 3ain_A 217 FLTREHIDWFGQQYLRSFADLLDFRF-----SPILADLNDLP-PALIITAEHDPLRD--QGEAYANKLLQSGVQ-VTSVG 287 (323)
T ss_dssp SSCHHHHHHHHHHHCSSGGGGGCTTT-----CGGGSCCTTCC-CEEEEEETTCTTHH--HHHHHHHHHHHTTCC-EEEEE
T ss_pred CCCHHHHHHHHHHhCCCCcccCCccc-----CcccCcccCCC-HHHEEECCCCccHH--HHHHHHHHHHHcCCC-EEEEE
Confidence 00111222222222111100000000 00111233333 99999999999884 333343333 34 79999
Q ss_pred ecCCCCcccc-----cChhcHHHHHHHHhc
Q 024681 239 LKIEGHLPHL-----SAPAIVGPVIRRALS 263 (264)
Q Consensus 239 ~~~~gH~~~~-----~~~~~~~~~i~~fl~ 263 (264)
+++++|.+.. +.++++.+.+.+||+
T Consensus 288 ~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 317 (323)
T 3ain_A 288 FNNVIHGFVSFFPFIEQGRDAIGLIGYVLR 317 (323)
T ss_dssp ETTCCTTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred ECCCccccccccCcCHHHHHHHHHHHHHHH
Confidence 9999998776 345788888888885
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.3e-24 Score=162.62 Aligned_cols=212 Identities=11% Similarity=-0.044 Sum_probs=130.7
Q ss_pred CCceEEEecCCCC---Chh--hHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-----
Q 024681 16 GDRILVLAHGFGT---DQS--AWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT----- 82 (264)
Q Consensus 16 ~~p~vv~~hG~~~---~~~--~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----- 82 (264)
..|+||++||.+. +.. .|..++..| .||.|+++|+||.+.+..+ . .+++..+.+..+.+.
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~------~-~~~D~~~~~~~l~~~~~~~~ 184 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYP------C-AYDDGWIALNWVNSRSWLKS 184 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT------H-HHHHHHHHHHHHHTCGGGCC
T ss_pred CceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCCc------h-hHHHHHHHHHHHHhCchhhc
Confidence 3479999999553 333 388888888 5999999999998776421 1 255555555555542
Q ss_pred -hCCC-eEEEEecChhHHHHHHHHHhCCC---ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 83 -LGVN-RCAYVGHSVSAMIGLLASIRRPD---LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 83 -~~~~-~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
++.+ +++|+|||+||.+|+.+|.++|+ +++++|+++|........ . .... .. .
T Consensus 185 ~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~-------~-~~~~----~~----------~ 242 (351)
T 2zsh_A 185 KKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERT-------E-SEKS----LD----------G 242 (351)
T ss_dssp TTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCC-------H-HHHH----HT----------T
T ss_pred CCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCC-------h-hhhh----cC----------C
Confidence 3456 99999999999999999999988 899999998854321110 0 0000 00 0
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCccc-CEEEEecCCCCCcchhhHHHHHHHc----CC
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRV-PCVIIQTSKDVSVPVSVAEYLQRHL----GG 232 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~~~~~~~~~~----~~ 232 (264)
.. .........+...+............... ......+.++++ |+|+++|++|.+++ ..+.+++.+ .+
T Consensus 243 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~ 315 (351)
T 2zsh_A 243 KY---FVTVRDRDWYWKAFLPEGEDREHPACNPF--SPRGKSLEGVSFPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQE 315 (351)
T ss_dssp TS---SCCHHHHHHHHHHHSCTTCCTTSTTTCTT--STTSCCCTTCCCCEEEEEEETTSTTHH--HHHHHHHHHHHTTCC
T ss_pred Cc---ccCHHHHHHHHHHhCCCCCCCCCcccCCC--CCCccchhhCCCCCEEEEEcCCCcchH--HHHHHHHHHHHcCCC
Confidence 00 00011111111111100000000000000 011234556666 99999999999886 233344433 35
Q ss_pred CceEEEecCCCCcccc----cChhcHHHHHHHHhcC
Q 024681 233 RNTVELLKIEGHLPHL----SAPAIVGPVIRRALSR 264 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||.++. ++++++.+.|.+||++
T Consensus 316 -~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 316 -VKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp -EEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred -EEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 899999999998877 7889999999999964
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-25 Score=183.37 Aligned_cols=198 Identities=14% Similarity=0.125 Sum_probs=134.4
Q ss_pred ceEEEecCCCCCh---hhHHH----hhhhc--CCceEEEecCCCCCCCCCCCC--CCcccchHHHHHHHHHHHHHHh---
Q 024681 18 RILVLAHGFGTDQ---SAWQR----ILPYL--NHHRVIMFDLVCAGSVNPDYF--DFRRYTTLDAYVDDLLNILDTL--- 83 (264)
Q Consensus 18 p~vv~~hG~~~~~---~~~~~----~~~~l--~g~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~--- 83 (264)
|+||++||.+.+. ..|.. +++.| +||.|+++|+||+|.|..... ....+. ....+|+.++++.+
T Consensus 486 p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~--~~~~~D~~~~~~~l~~~ 563 (706)
T 2z3z_A 486 PVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLG--QTEMADQMCGVDFLKSQ 563 (706)
T ss_dssp EEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTT--HHHHHHHHHHHHHHHTS
T ss_pred cEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccC--CccHHHHHHHHHHHHhC
Confidence 7899999977665 34554 56777 899999999999998853200 001111 22345555555544
Q ss_pred ---CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccccc
Q 024681 84 ---GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA 160 (264)
Q Consensus 84 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
+.++++++||||||.+++.+|.++|++++++|++++...+.. ... ... ..+. .
T Consensus 564 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-------~~~-----~~~------~~~~----~-- 619 (706)
T 2z3z_A 564 SWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNR-------YAI-----MYG------ERYF----D-- 619 (706)
T ss_dssp TTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGG-------SBH-----HHH------HHHH----C--
T ss_pred CCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHH-------HHh-----hhh------hhhc----C--
Confidence 245899999999999999999999999999999998643210 000 000 0000 0
Q ss_pred CCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---CceEE
Q 024681 161 VGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTVE 237 (264)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~ 237 (264)
....... .+. ..+....+.++++|+|+++|++|..+|.+..+++.+.+++ .+++.
T Consensus 620 ~~~~~~~---~~~-------------------~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 677 (706)
T 2z3z_A 620 APQENPE---GYD-------------------AANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYY 677 (706)
T ss_dssp CTTTCHH---HHH-------------------HHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEE
T ss_pred CcccChh---hhh-------------------hCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEE
Confidence 0000000 000 0122334567789999999999999999998888887753 15899
Q ss_pred EecCCCCcccccChhcHHHHHHHHhc
Q 024681 238 LLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 238 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
++|++||.+..++++++.+.+.+||+
T Consensus 678 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 703 (706)
T 2z3z_A 678 VYPSHEHNVMGPDRVHLYETITRYFT 703 (706)
T ss_dssp EETTCCSSCCTTHHHHHHHHHHHHHH
T ss_pred EeCCCCCCCCcccHHHHHHHHHHHHH
Confidence 99999999988888999999999986
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=171.38 Aligned_cols=219 Identities=11% Similarity=-0.001 Sum_probs=132.6
Q ss_pred EEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 9 HVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 9 ~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
.|...++ ..|+||++||.+++...+ .+..| +||.|+++|+||+|.+... .... ..+++.+.+..+.+..++
T Consensus 165 l~~P~~~~~~P~Vv~lhG~~~~~~~~--~a~~La~~Gy~Vla~D~rG~~~~~~~---~~~~-~~~d~~~a~~~l~~~~~v 238 (446)
T 3hlk_A 165 LFLPPEPGPFPGIVDMFGTGGGLLEY--RASLLAGKGFAVMALAYYNYEDLPKT---METL-HLEYFEEAMNYLLSHPEV 238 (446)
T ss_dssp EEECSSSCCBCEEEEECCSSCSCCCH--HHHHHHTTTCEEEEECCSSSTTSCSC---CSEE-EHHHHHHHHHHHHTSTTB
T ss_pred EEeCCCCCCCCEEEEECCCCcchhhH--HHHHHHhCCCEEEEeccCCCCCCCcc---hhhC-CHHHHHHHHHHHHhCCCC
Confidence 3444444 347999999998864333 46777 8999999999999988643 2223 367766666666655443
Q ss_pred --CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 86 --NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 86 --~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
++++|+||||||.+|+.+|.++|+ ++++|++++.............. ................
T Consensus 239 d~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 303 (446)
T 3hlk_A 239 KGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGE--------------TLPPVGVNRNRIKVTK 303 (446)
T ss_dssp CCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTE--------------EECCCCBCGGGCEECS
T ss_pred CCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCc--------------cCCccccchhcccccc
Confidence 699999999999999999999998 99999998864322111000000 0000000000000000
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhh---hcCCccccccCCcccCEEEEecCCCCCcchhhH-HHHHHHcCC---C-ce
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKT---VFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA-EYLQRHLGG---R-NT 235 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~---~-~~ 235 (264)
. ........+.. ....+....+.++++|+|+++|++|.++|.+.. +.+.+.++. . ++
T Consensus 304 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~ 368 (446)
T 3hlk_A 304 D---------------GYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQ 368 (446)
T ss_dssp S---------------SCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCE
T ss_pred c---------------hHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcE
Confidence 0 00000000000 000111223567889999999999999998443 555555432 2 68
Q ss_pred EEEecCCCCccc----------------------------ccChhcHHHHHHHHhc
Q 024681 236 VELLKIEGHLPH----------------------------LSAPAIVGPVIRRALS 263 (264)
Q Consensus 236 ~~~~~~~gH~~~----------------------------~~~~~~~~~~i~~fl~ 263 (264)
+++++++||.+. .+.++++.+.+.+||+
T Consensus 369 l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~ 424 (446)
T 3hlk_A 369 IICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFH 424 (446)
T ss_dssp EEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999872 2235667888888875
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-23 Score=151.01 Aligned_cols=205 Identities=17% Similarity=0.116 Sum_probs=133.5
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCc--eEEEecCCCCCCCCCCC------CCC--------cccchHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHH--RVIMFDLVCAGSVNPDY------FDF--------RRYTTLDAYVDDLL 77 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~--~v~~~d~~g~G~s~~~~------~~~--------~~~~~~~~~~~~~~ 77 (264)
..+||||+||++++...|..+++.| .|+ +|+++|.+++|.+.... ..+ ....++.+.++++.
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~ 84 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIK 84 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHH
Confidence 3469999999999999999999999 564 69999999998752110 000 00112444555555
Q ss_pred HHHH----HhCCCeEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh
Q 024681 78 NILD----TLGVNRCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN 148 (264)
Q Consensus 78 ~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
++++ ..+.++++++||||||.+++.++.++|+ +|+++|+++++........... .
T Consensus 85 ~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~----------------~ 148 (249)
T 3fle_A 85 EVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENV----------------N 148 (249)
T ss_dssp HHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCT----------------T
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCc----------------c
Confidence 5554 4488999999999999999999999874 7999999998643221100000 0
Q ss_pred hhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecC------CCCCcchhh
Q 024681 149 YEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTS------KDVSVPVSV 222 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~------~D~~~~~~~ 222 (264)
. ..+.. .. .+......+..+. ..+..+++.++|++.|+|+ .|..||...
T Consensus 149 ~----~~~~~----~g---------------~p~~~~~~~~~l~--~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~S 203 (249)
T 3fle_A 149 E----IIVDK----QG---------------KPSRMNAAYRQLL--SLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSS 203 (249)
T ss_dssp T----SCBCT----TC---------------CBSSCCHHHHHTG--GGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHH
T ss_pred h----hhhcc----cC---------------CCcccCHHHHHHH--HHHhhCCccCCeEEEEeccCCCCCCCCCcccHHH
Confidence 0 00000 00 0000001111111 1123345468899999998 699999999
Q ss_pred HHHHHHHcCCC---ceEEEecC--CCCcccccChhcHHHHHHHHh
Q 024681 223 AEYLQRHLGGR---NTVELLKI--EGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 223 ~~~~~~~~~~~---~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl 262 (264)
++.+...+++. .+...+.| +.|....+++ ++.+.|.+||
T Consensus 204 a~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 204 SQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp HHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHHHH
T ss_pred HHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHHHh
Confidence 98877777653 24455655 9999888877 7889999997
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-23 Score=158.67 Aligned_cols=211 Identities=10% Similarity=-0.081 Sum_probs=126.6
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC--Ce
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--NR 87 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 87 (264)
..|+||++||.+ ++...|..++..| .||.|+++|+||+|++..+ ....+....++.+.+.++.++. ++
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~d~~~ 153 (323)
T 1lzl_A 78 PVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFP----GPVNDCYAALLYIHAHAEELGIDPSR 153 (323)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTT----HHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCCCC----chHHHHHHHHHHHHhhHHHcCCChhh
Confidence 347999999988 8888898888888 3899999999999998642 2222344444555554555555 58
Q ss_pred EEEEecChhHHHHHHHHHhCCC----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPD----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
++|+|||+||.+|+.+|.++++ .++++|+++|........ .... . +... ..
T Consensus 154 i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~--------~~~~-----------~----~~~~--~~ 208 (323)
T 1lzl_A 154 IAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLET--------VSMT-----------N----FVDT--PL 208 (323)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCS--------HHHH-----------H----CSSC--SS
T ss_pred eEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCc--------hhHH-----------H----hccC--CC
Confidence 9999999999999999988765 499999999864321110 0000 0 0000 00
Q ss_pred CChHHHHHHHHhhcccCc-----hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc----CCCc
Q 024681 164 DVPAAVREFSRTLFNMRP-----DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL----GGRN 234 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~ 234 (264)
........+...+..... ........... ...+.. ..|+++++|++|.+++ ....+++.+ .. +
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~----~~~~~~-~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~-~ 280 (323)
T 1lzl_A 209 WHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSR----ATDLTG-LPPTYLSTMELDPLRD--EGIEYALRLLQAGVS-V 280 (323)
T ss_dssp CCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGG----CSCCTT-CCCEEEEEETTCTTHH--HHHHHHHHHHHTTCC-E
T ss_pred CCHHHHHHHHHHhCCCCcccccccCCCcccCccc----CcccCC-CChhheEECCcCCchH--HHHHHHHHHHHcCCC-E
Confidence 001111111111111100 00000000000 001111 2699999999999884 333444333 34 8
Q ss_pred eEEEecCCCCcccc----cChhcHHHHHHHHhc
Q 024681 235 TVELLKIEGHLPHL----SAPAIVGPVIRRALS 263 (264)
Q Consensus 235 ~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~ 263 (264)
+++++++++|.+.. +.++++.+.+.+||+
T Consensus 281 ~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~ 313 (323)
T 1lzl_A 281 ELHSFPGTFHGSALVATAAVSERGAAEALTAIR 313 (323)
T ss_dssp EEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHH
T ss_pred EEEEeCcCccCcccCccCHHHHHHHHHHHHHHH
Confidence 99999999997543 235678888888885
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.5e-24 Score=175.64 Aligned_cols=208 Identities=13% Similarity=0.050 Sum_probs=140.9
Q ss_pred CCceEEEecCCCCChh--hHHHhhhhc--CCceEEEecCCC---CCCCCCC--CCCCcccchHHHHHHHHHHHHHH--hC
Q 024681 16 GDRILVLAHGFGTDQS--AWQRILPYL--NHHRVIMFDLVC---AGSVNPD--YFDFRRYTTLDAYVDDLLNILDT--LG 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~--~~~~~~~~l--~g~~v~~~d~~g---~G~s~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~ 84 (264)
..|+||++||.+.+.. .|..+++.| +||.|+++|+|| +|.+... ......+ +++++.+.+..+++. ++
T Consensus 423 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~-~~~d~~~~~~~l~~~~~~~ 501 (662)
T 3azo_A 423 LPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVV-DVEDCAAVATALAEEGTAD 501 (662)
T ss_dssp CCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTH-HHHHHHHHHHHHHHTTSSC
T ss_pred CccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhhccccccc-cHHHHHHHHHHHHHcCCcC
Confidence 3579999999987654 777888888 799999999999 7766321 0111123 378888888888887 56
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
.++++++|||+||.+++.++.. |++++++|++++...... .. ......+...
T Consensus 502 ~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~---------------~~---~~~~~~~~~~--------- 553 (662)
T 3azo_A 502 RARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLG---------------WA---DGGTHDFESR--------- 553 (662)
T ss_dssp TTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHH---------------HH---TTCSCGGGTT---------
T ss_pred hhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHH---------------Hh---cccccchhhH---------
Confidence 6799999999999999998886 999999999988533100 00 0000000000
Q ss_pred ChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecC
Q 024681 165 VPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKI 241 (264)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~ 241 (264)
. ........+..... +...+....+.++++|+|+++|++|..+|.+..+.+.+.++.. ++++++++
T Consensus 554 ---~----~~~~~~~~~~~~~~----~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 622 (662)
T 3azo_A 554 ---Y----LDFLIGSFEEFPER----YRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEG 622 (662)
T ss_dssp ---H----HHHHTCCTTTCHHH----HHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETT
T ss_pred ---h----HHHHhCCCccchhH----HHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 0 00000000000000 0011223345677899999999999999999999999998762 48999999
Q ss_pred CCCccc-ccChhcHHHHHHHHhc
Q 024681 242 EGHLPH-LSAPAIVGPVIRRALS 263 (264)
Q Consensus 242 ~gH~~~-~~~~~~~~~~i~~fl~ 263 (264)
+||.+. .+++.++.+.+.+||+
T Consensus 623 ~gH~~~~~~~~~~~~~~~~~fl~ 645 (662)
T 3azo_A 623 EGHGFRRKETMVRALEAELSLYA 645 (662)
T ss_dssp CCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHHHHHH
Confidence 999764 4567888888888885
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=163.62 Aligned_cols=199 Identities=15% Similarity=0.140 Sum_probs=131.4
Q ss_pred CCceEEEecC---CCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEE
Q 024681 16 GDRILVLAHG---FGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAY 90 (264)
Q Consensus 16 ~~p~vv~~hG---~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 90 (264)
+.|+||++|| ..++...|..++..| +||.|+++|+||+|.+... ....+.....+.+.+..+.++.+++++
T Consensus 81 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~i~l 156 (303)
T 4e15_A 81 QAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLE----QLMTQFTHFLNWIFDYTEMTKVSSLTF 156 (303)
T ss_dssp TCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCHH----HHHHHHHHHHHHHHHHHHHTTCSCEEE
T ss_pred CCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCChh----HHHHHHHHHHHHHHHHhhhcCCCeEEE
Confidence 4589999999 446667788888888 8999999999999876321 111122233333333334567789999
Q ss_pred EecChhHHHHHHHHHhCC-------CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 91 VGHSVSAMIGLLASIRRP-------DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~p-------~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
+|||+||.+++.++.+.+ ++++++|++++...... ....... .....+..
T Consensus 157 ~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~-------------------~~~~~~~----~~~~~~~~ 213 (303)
T 4e15_A 157 AGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRE-------------------LSNLESV----NPKNILGL 213 (303)
T ss_dssp EEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHH-------------------HHTCTTT----SGGGTTCC
T ss_pred EeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHh-------------------hhccccc----chhhhhcC
Confidence 999999999999998654 37999999998533100 0000000 00000000
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCC----cccCEEEEecCCCCCcchhhHHHHHHHcCC---CceE
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGL----VRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTV 236 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~ 236 (264)
.+...... ......+.. +.+|+++++|++|..++.+.++.+++.++. .+++
T Consensus 214 ----------------~~~~~~~~------sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~ 271 (303)
T 4e15_A 214 ----------------NERNIESV------SPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASF 271 (303)
T ss_dssp ----------------CTTTTTTT------CGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred ----------------CHHHHHHc------CchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEE
Confidence 00000000 000022333 389999999999999999999998888752 2799
Q ss_pred EEecCCCCcccccChhcHHHHHHHHhc
Q 024681 237 ELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++++|+.+.+.+......+.+||.
T Consensus 272 ~~~~g~~H~~~~~~~~~~~~~l~~~l~ 298 (303)
T 4e15_A 272 TLFKGYDHFDIIEETAIDDSDVSRFLR 298 (303)
T ss_dssp EEEEEEETTHHHHGGGSTTSHHHHHHH
T ss_pred EEeCCCCchHHHHHHhCCCcHHHHHHH
Confidence 999999999999988888888877763
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-23 Score=151.86 Aligned_cols=200 Identities=17% Similarity=0.141 Sum_probs=129.7
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-CCce----EEEecCCCCC------CCCCCCCC--------CcccchHHHHHHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-NHHR----VIMFDLVCAG------SVNPDYFD--------FRRYTTLDAYVDDLL 77 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-~g~~----v~~~d~~g~G------~s~~~~~~--------~~~~~~~~~~~~~~~ 77 (264)
.++|||+||++++...|..+++.| +.+. +++++..+.| .+...... ...+ +++++++++.
T Consensus 3 ~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~a~~l~ 81 (254)
T 3ds8_A 3 QIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQA-TPDDWSKWLK 81 (254)
T ss_dssp CCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTS-CHHHHHHHHH
T ss_pred CCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCC-CHHHHHHHHH
Confidence 468999999999999999999999 5443 3333333332 22110000 1223 4888888884
Q ss_pred ----HHHHHhCCCeEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh
Q 024681 78 ----NILDTLGVNRCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN 148 (264)
Q Consensus 78 ----~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
.+.+..+.++++++||||||.+++.++.++|+ +|+++|+++++...... .. .
T Consensus 82 ~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~------------------~~-~ 142 (254)
T 3ds8_A 82 IAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDP------------------ND-N 142 (254)
T ss_dssp HHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCH------------------HH-H
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccc------------------cc-c
Confidence 44455678899999999999999999999998 89999999986432110 00 0
Q ss_pred hhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecC------CCCCcchhh
Q 024681 149 YEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTS------KDVSVPVSV 222 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~------~D~~~~~~~ 222 (264)
... ......... ......+. .....+.+ ++|++.|+|+ .|.++|...
T Consensus 143 ~~~----~~~~~~p~~-~~~~~~~~---------------------~~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~s 195 (254)
T 3ds8_A 143 GMD----LSFKKLPNS-TPQMDYFI---------------------KNQTEVSP-DLEVLAIAGELSEDNPTDGIVPTIS 195 (254)
T ss_dssp CSC----TTCSSCSSC-CHHHHHHH---------------------HTGGGSCT-TCEEEEEEEESBTTBCBCSSSBHHH
T ss_pred ccc----cccccCCcc-hHHHHHHH---------------------HHHhhCCC-CcEEEEEEecCCCCCCCCcEeeHHH
Confidence 000 000000000 00111100 01112222 7899999999 999999999
Q ss_pred HHHHHHHcCCC---ceEEEecC--CCCcccccChhcHHHHHHHHhcC
Q 024681 223 AEYLQRHLGGR---NTVELLKI--EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 223 ~~~~~~~~~~~---~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++.+...+++. .+...+.+ ++|..+.++|+ +.+.+..||++
T Consensus 196 s~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~ 241 (254)
T 3ds8_A 196 SLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEK 241 (254)
T ss_dssp HTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHT
T ss_pred HHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHH
Confidence 99988888753 33445555 77999999885 88999999864
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-23 Score=152.15 Aligned_cols=191 Identities=18% Similarity=0.121 Sum_probs=116.8
Q ss_pred CCcceeeEEEEeCC-CCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCC--cc---------
Q 024681 2 GDLLEALHVRVVGT-GDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDF--RR--------- 65 (264)
Q Consensus 2 g~~~~~~~~~~~g~-~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~--~~--------- 65 (264)
|..+..+.|...+. ..|.||++||++++. ..+..+++.| +||.|+++|+||||.|....... ..
T Consensus 40 G~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~ 119 (259)
T 4ao6_A 40 GRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVVGLDAFPR 119 (259)
T ss_dssp TEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGGGSTTHHH
T ss_pred CeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhhhhhhhhh
Confidence 44455555665554 457899999999874 4577888888 99999999999999885421110 00
Q ss_pred ----cchHHHHHHHHHHHHHH----hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHH
Q 024681 66 ----YTTLDAYVDDLLNILDT----LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAE 137 (264)
Q Consensus 66 ----~~~~~~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 137 (264)
.........|..+.++. .+.+++.++|+|+||.+++.++...|+ +++.|+..+......
T Consensus 120 ~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~~~------------ 186 (259)
T 4ao6_A 120 MWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEGVN------------ 186 (259)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTSTT------------
T ss_pred hhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEecccccccc------------
Confidence 00122233344444433 366899999999999999999999885 666665544211000
Q ss_pred HHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCC
Q 024681 138 IDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVS 217 (264)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 217 (264)
. . +..+.+.+|++|+|+++|++|.+
T Consensus 187 ------------------------------~-~------------------------~~~~~a~~i~~P~Li~hG~~D~~ 211 (259)
T 4ao6_A 187 ------------------------------G-E------------------------DLVRLAPQVTCPVRYLLQWDDEL 211 (259)
T ss_dssp ------------------------------H-H------------------------HHHHHGGGCCSCEEEEEETTCSS
T ss_pred ------------------------------c-c------------------------chhhhhccCCCCEEEEecCCCCC
Confidence 0 0 00112345789999999999999
Q ss_pred cchhhHHHHHHHcCCC-ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 218 VPVSVAEYLQRHLGGR-NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 218 ~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+|++.++.+.+.+... +++++++ ++|... ...+..+.+.+||+
T Consensus 212 vp~~~~~~l~~al~~~~k~l~~~~-G~H~~~--p~~e~~~~~~~fl~ 255 (259)
T 4ao6_A 212 VSLQSGLELFGKLGTKQKTLHVNP-GKHSAV--PTWEMFAGTVDYLD 255 (259)
T ss_dssp SCHHHHHHHHHHCCCSSEEEEEES-SCTTCC--CHHHHTHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCeEEEEeC-CCCCCc--CHHHHHHHHHHHHH
Confidence 9999999999998754 5677787 567432 12345566666664
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-24 Score=178.71 Aligned_cols=201 Identities=13% Similarity=0.091 Sum_probs=134.9
Q ss_pred CceEEEecCCCCCh---hhHH-----Hhhhhc--CCceEEEecCCCCCCCCCCCCC--Cccc--chHHHHHHHHHHHHHH
Q 024681 17 DRILVLAHGFGTDQ---SAWQ-----RILPYL--NHHRVIMFDLVCAGSVNPDYFD--FRRY--TTLDAYVDDLLNILDT 82 (264)
Q Consensus 17 ~p~vv~~hG~~~~~---~~~~-----~~~~~l--~g~~v~~~d~~g~G~s~~~~~~--~~~~--~~~~~~~~~~~~~~~~ 82 (264)
.|+||++||.+.+. ..|. .+++.| .||.|+++|+||+|.|...... ...+ ...+++.+.+..+.+.
T Consensus 517 ~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 596 (741)
T 2ecf_A 517 YPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQ 596 (741)
T ss_dssp EEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTS
T ss_pred cCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhc
Confidence 47899999988764 3454 577777 8999999999999997532000 0000 1134444444433332
Q ss_pred --hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccccc
Q 024681 83 --LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA 160 (264)
Q Consensus 83 --~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
++.++++++||||||.+++.+|.++|++++++|++++...... +.. .+ . ..+.
T Consensus 597 ~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-------~~~-~~---~-------~~~~------- 651 (741)
T 2ecf_A 597 PWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGL-------YDS-HY---T-------ERYM------- 651 (741)
T ss_dssp TTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGG-------SBH-HH---H-------HHHH-------
T ss_pred CCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhh-------hcc-cc---c-------hhhc-------
Confidence 1346899999999999999999999999999999998643210 000 00 0 0000
Q ss_pred CCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEE
Q 024681 161 VGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVE 237 (264)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~ 237 (264)
... ......+. ..+....+.++++|+|+++|++|..++.+..+.+.+.++.. ++++
T Consensus 652 -~~~-~~~~~~~~-------------------~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 710 (741)
T 2ecf_A 652 -DLP-ARNDAGYR-------------------EARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELM 710 (741)
T ss_dssp -CCT-GGGHHHHH-------------------HHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEE
T ss_pred -CCc-ccChhhhh-------------------hcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEE
Confidence 000 00000000 01222345677899999999999999999999888887541 5899
Q ss_pred EecCCCCcccccChhcHHHHHHHHhc
Q 024681 238 LLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 238 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++||.+..+.++++.+.+.+||+
T Consensus 711 ~~~~~~H~~~~~~~~~~~~~i~~fl~ 736 (741)
T 2ecf_A 711 TYPGAKHGLSGADALHRYRVAEAFLG 736 (741)
T ss_dssp EETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCchhHHHHHHHHHHH
Confidence 99999999988877888999999985
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=156.15 Aligned_cols=209 Identities=14% Similarity=0.116 Sum_probs=139.4
Q ss_pred eEEEecC--CCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-CCCeEEEEecC
Q 024681 19 ILVLAHG--FGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-GVNRCAYVGHS 94 (264)
Q Consensus 19 ~vv~~hG--~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 94 (264)
+++|+|| ++++...|..++..| .++.|+++|+||+|.+.........+ +++++++++.+.++.+ ...+++|+|||
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~~~~-~~~~~a~~~~~~i~~~~~~~p~~l~G~S 169 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPA-DLDTALDAQARAILRAAGDAPVVLLGHA 169 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEES-SHHHHHHHHHHHHHHHHTTSCEEEEEET
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCCCCceEEecCCCCCCCcccccCCCCC-CHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 8999998 678889999999999 99999999999999972100001223 5999999999998877 45799999999
Q ss_pred hhHHHHHHHHHhC----CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHH
Q 024681 95 VSAMIGLLASIRR----PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVR 170 (264)
Q Consensus 95 ~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
+||.+|+.+|.+. +++|++++++++.+.... .....+...+. ..+... ...........
T Consensus 170 ~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~----------~~~~~~~~~l~---~~~~~~----~~~~~~~~~~~ 232 (319)
T 2hfk_A 170 GGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQ----------EPIEVWSRQLG---EGLFAG----ELEPMSDARLL 232 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSC----------HHHHHTHHHHH---HHHHHT----CSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCch----------hHHHHHHHHhh---HHHHHh----hccccchHHHH
Confidence 9999999999886 456999999998643210 00111111111 011111 11111111111
Q ss_pred HHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHHHHcCCCceEEEecCCCCcccc-
Q 024681 171 EFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQRHLGGRNTVELLKIEGHLPHL- 248 (264)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~- 248 (264)
... .+...... + ....+++|+++++| +|..++... ...+.+..+...+++.++ +||+.+.
T Consensus 233 ~~~------------~~~~~~~~--~--~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~H~~~~~ 294 (319)
T 2hfk_A 233 AMG------------RYARFLAG--P--RPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVP-GDHFTMMR 294 (319)
T ss_dssp HHH------------HHHHHHHS--C--CCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTHHHH
T ss_pred HHH------------HHHHHHHh--C--CCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeC-CCcHHHHH
Confidence 100 00000001 1 13678999999999 999888765 555555555437899999 7998654
Q ss_pred cChhcHHHHHHHHhc
Q 024681 249 SAPAIVGPVIRRALS 263 (264)
Q Consensus 249 ~~~~~~~~~i~~fl~ 263 (264)
++++++.+.|.+||+
T Consensus 295 e~~~~~~~~i~~~L~ 309 (319)
T 2hfk_A 295 DHAPAVAEAVLSWLD 309 (319)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHH
Confidence 799999999999985
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=156.31 Aligned_cols=234 Identities=10% Similarity=0.123 Sum_probs=131.5
Q ss_pred CCCCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEe
Q 024681 14 GTGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVG 92 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G 92 (264)
+.++++|||+||++++...|..+.+.|. ++|+++|+++.. ..+ +++++++++.+.++.+.. ++++|+|
T Consensus 21 ~~~~~~l~~~hg~~~~~~~~~~~~~~L~-~~v~~~d~~~~~---------~~~-~~~~~a~~~~~~i~~~~~~~~~~l~G 89 (283)
T 3tjm_A 21 QSSERPLFLVHPIEGSTTVFHSLASRLS-IPTYGLQCTRAA---------PLD-SIHSLAAYYIDCIRQVQPEGPYRVAG 89 (283)
T ss_dssp CSSSCCEEEECCTTCCSGGGHHHHHHCS-SCEEEECCCTTS---------CCS-CHHHHHHHHHHHHTTTCCSSCCEEEE
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHHhcC-ceEEEEecCCCC---------CCC-CHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 3455799999999999999999999998 999999996421 122 599999999999999865 7999999
Q ss_pred cChhHHHHHHHHHhC---CCccc---eeEEecCCCCCCCC------CCCCCCccHHHHHHHHHHHHhhhhhh-hhhcccc
Q 024681 93 HSVSAMIGLLASIRR---PDLFT---KLILIGASPRFLND------EDYHGGFEEAEIDKVFRAMEANYEAW-AYGYAPL 159 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~---p~~v~---~~vl~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (264)
|||||.+|+.+|.+. |+++. +++++++.+.+... ...............+..+...+... .......
T Consensus 90 hS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 169 (283)
T 3tjm_A 90 YSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTGSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEA 169 (283)
T ss_dssp ETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTTHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred ECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCchhhhhhhhhhhhccCCCCchHHHHHHHHHHHHHhcccchhHHHHH
Confidence 999999999999866 78888 99999986542100 00000000011111111110000000 0000000
Q ss_pred cCC-CCChHHHHHHHHhh----cccCchhhhhhhhhhcC-----CccccccCCcccCEEEEecCCCCCc--chhhHHHHH
Q 024681 160 AVG-ADVPAAVREFSRTL----FNMRPDISLFVSKTVFD-----TDLRGILGLVRVPCVIIQTSKDVSV--PVSVAEYLQ 227 (264)
Q Consensus 160 ~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~P~l~i~g~~D~~~--~~~~~~~~~ 227 (264)
... ...........+.. ...++.....+...+.. ..+.. ..++++|+++++|++|... +.+....+.
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-~~~~~~Pvl~l~g~~d~~~~~~~~~~~~w~ 248 (283)
T 3tjm_A 170 LLPLKGLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTP-KAKYHGNVMLLRAKTGGAYGEAAGADYNLS 248 (283)
T ss_dssp HTTSSSHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHCCC-SSCBCSCEEEEEC--------CCTTTTTGG
T ss_pred HhcCCCHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCC-CCCCCCCEEEEecCCccccccccCcccchH
Confidence 000 11111111111111 11122111111111100 01111 1468999999999999763 334444566
Q ss_pred HHcCCCceEEEecCCCCcccccChh--cHHHHHHH
Q 024681 228 RHLGGRNTVELLKIEGHLPHLSAPA--IVGPVIRR 260 (264)
Q Consensus 228 ~~~~~~~~~~~~~~~gH~~~~~~~~--~~~~~i~~ 260 (264)
+..++..+++.++ +||+.+++.|. ++++.|.+
T Consensus 249 ~~~~~~~~~~~v~-ggH~~~l~~p~~~~va~~i~~ 282 (283)
T 3tjm_A 249 QVCDGKVSVHVIE-GDHATLLEGSGLESIISIIHS 282 (283)
T ss_dssp GTBCSCEEEEECS-SCTTGGGSHHHHHHHHHHHHH
T ss_pred hhccCceEEEEEC-CCCceeeCCchHHHHHHHHhc
Confidence 6665546888887 79999998885 66666654
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-21 Score=145.07 Aligned_cols=223 Identities=13% Similarity=0.033 Sum_probs=130.7
Q ss_pred CCCceEEEecCCC---CChhhH-HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC----
Q 024681 15 TGDRILVLAHGFG---TDQSAW-QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG---- 84 (264)
Q Consensus 15 ~~~p~vv~~hG~~---~~~~~~-~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 84 (264)
...|+||++||.+ ++...| ..+...+ .||+|+++|+|+.++. .+....+|+.++++++.
T Consensus 25 ~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~-----------~~p~~~~D~~~al~~l~~~~~ 93 (274)
T 2qru_A 25 EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT-----------KIDHILRTLTETFQLLNEEII 93 (274)
T ss_dssp SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS-----------CHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC-----------CCcHHHHHHHHHHHHHHhccc
Confidence 3457999999987 566555 4566667 6899999999986432 25566677666666553
Q ss_pred -CCeEEEEecChhHHHHHHHHH---hCCCccceeEEecCCCCCCCC-CCCCCCccHHHHHHHHHHHHhhhhhhhhhc-cc
Q 024681 85 -VNRCAYVGHSVSAMIGLLASI---RRPDLFTKLILIGASPRFLND-EDYHGGFEEAEIDKVFRAMEANYEAWAYGY-AP 158 (264)
Q Consensus 85 -~~~~~l~G~S~Gg~~a~~~a~---~~p~~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 158 (264)
.++++|+|+|+||.+|+.++. ..+.++++++++.+....... ......... ......... ..
T Consensus 94 ~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 161 (274)
T 2qru_A 94 QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQA------------ISAKEIAAIDQT 161 (274)
T ss_dssp TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSC------------CCSGGGTTSCCS
T ss_pred cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhcccc------------ccHHHHhhhccc
Confidence 689999999999999999987 357789999988764431000 000000000 000000000 00
Q ss_pred cc-CCCCChHHHHHH--HHhhcccCchhhhhhhhh--hcCCcc-ccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC
Q 024681 159 LA-VGADVPAAVREF--SRTLFNMRPDISLFVSKT--VFDTDL-RGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232 (264)
Q Consensus 159 ~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 232 (264)
.. ...........+ ........ ........ ...... ...+..+ .|+++++|+.|..++...++++++.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~l~~~~~~ 238 (274)
T 2qru_A 162 KPVWDDPFLSRYLLYHYSIQQALLP--HFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKKIGRTIPE 238 (274)
T ss_dssp SCCSCCTTCTTHHHHHHHHHTTCHH--HHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHHHHHHSTT
T ss_pred CCCCCCccccchhhhhhhhhhcchh--hccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHHHHHhCCC
Confidence 00 000000000000 00000000 00000000 000001 1123445 7999999999999998889999999998
Q ss_pred CceEEEecCCCCcccccChh----cHHHHHHHHhcC
Q 024681 233 RNTVELLKIEGHLPHLSAPA----IVGPVIRRALSR 264 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~ 264 (264)
++++++++++|.++.+.+. ++.+.+.+||++
T Consensus 239 -~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 239 -STFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp -CEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred -cEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 8999999999988766543 457788888864
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=158.67 Aligned_cols=214 Identities=15% Similarity=0.034 Sum_probs=126.2
Q ss_pred CCceEEEecC---CCCChhhHHHhhhhc--C-CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC--CCe
Q 024681 16 GDRILVLAHG---FGTDQSAWQRILPYL--N-HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG--VNR 87 (264)
Q Consensus 16 ~~p~vv~~hG---~~~~~~~~~~~~~~l--~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 87 (264)
..|+||++|| ++++...|..++..| + ||.|+++|+||+|.+..+ ....+.....+.+.+..+.++ .++
T Consensus 73 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~~ 148 (310)
T 2hm7_A 73 PYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFP----AAVEDAYDALQWIAERAADFHLDPAR 148 (310)
T ss_dssp SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT----HHHHHHHHHHHHHHHTTGGGTEEEEE
T ss_pred CCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCC----ccHHHHHHHHHHHHhhHHHhCCCcce
Confidence 3479999999 778888999999988 3 899999999999987532 111112222222222222223 368
Q ss_pred EEEEecChhHHHHHHHHHhCCC----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPD----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
++++|||+||.+|+.+|.++|+ +++++|+++|........ ....... . .... .
T Consensus 149 i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~------~~~~~~~-----------~---~~~~---~ 205 (310)
T 2hm7_A 149 IAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAH------PPASIEE-----------N---AEGY---L 205 (310)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTS------CCHHHHH-----------T---SSSS---S
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCccc------CCcchhh-----------c---CCCC---C
Confidence 9999999999999999998776 699999999864432100 0000000 0 0000 0
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---CceEEEec
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTVELLK 240 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~ 240 (264)
........+...+............ .......+..+. |+++++|++|.++ ...+.+++.++. .+++++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~l~~~~-P~lii~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~ 278 (310)
T 2hm7_A 206 LTGGMMLWFRDQYLNSLEELTHPWF----SPVLYPDLSGLP-PAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIENFE 278 (310)
T ss_dssp SCHHHHHHHHHHHCSSGGGGGCTTT----CGGGCSCCTTCC-CEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCHHHHHHHHHHhCCCCCccCCccC----CCCcCccccCCC-CEEEEEecCCCch--HHHHHHHHHHHHCCCCEEEEEeC
Confidence 0111122222222111100000000 000111233333 9999999999987 344445444432 27999999
Q ss_pred CCCCcccc-----cChhcHHHHHHHHhc
Q 024681 241 IEGHLPHL-----SAPAIVGPVIRRALS 263 (264)
Q Consensus 241 ~~gH~~~~-----~~~~~~~~~i~~fl~ 263 (264)
+++|.+.. +.++++.+.+.+||+
T Consensus 279 g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 306 (310)
T 2hm7_A 279 DLIHGFAQFYSLSPGATKALVRIAEKLR 306 (310)
T ss_dssp EEETTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred CCccchhhhcccChHHHHHHHHHHHHHH
Confidence 99996543 456788899999985
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.8e-23 Score=154.50 Aligned_cols=215 Identities=14% Similarity=0.076 Sum_probs=129.0
Q ss_pred EEEeCCCCceEEEecCCC---CChhhHHHhhhhc-C--CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-
Q 024681 10 VRVVGTGDRILVLAHGFG---TDQSAWQRILPYL-N--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT- 82 (264)
Q Consensus 10 ~~~~g~~~p~vv~~hG~~---~~~~~~~~~~~~l-~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~- 82 (264)
|...+...|+||++||.+ ++...|..++..| . ||.|+++|+|+.+....+ . .+++..+.+..+.+.
T Consensus 80 ~~p~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~----~---~~~D~~~a~~~l~~~~ 152 (326)
T 3ga7_A 80 YSPQPTSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYP----Q---AIEETVAVCSYFSQHA 152 (326)
T ss_dssp EESSSSCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCTT----H---HHHHHHHHHHHHHHTT
T ss_pred EeCCCCCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCCC----c---HHHHHHHHHHHHHHhH
Confidence 444444558999999988 8888999999998 5 999999999987655321 1 233333333333332
Q ss_pred --hC--CCeEEEEecChhHHHHHHHHHhCCCc------cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhh
Q 024681 83 --LG--VNRCAYVGHSVSAMIGLLASIRRPDL------FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAW 152 (264)
Q Consensus 83 --~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~------v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (264)
++ .++++++|+|+||.+|+.+|.+.|++ +++++++.+........ ...
T Consensus 153 ~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~---------~~~------------- 210 (326)
T 3ga7_A 153 DEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSV---------SRR------------- 210 (326)
T ss_dssp TTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCH---------HHH-------------
T ss_pred HHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCCh---------hHh-------------
Confidence 23 36899999999999999999987764 88999988753321110 000
Q ss_pred hhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC
Q 024681 153 AYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232 (264)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 232 (264)
.+. .............+...+........... .......+.+...|+++++|+.|.+++ ....+++.+..
T Consensus 211 --~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~ 280 (326)
T 3ga7_A 211 --LFG-GAWDGLTREDLDMYEKAYLRNDEDRESPW-----YCLFNNDLTRDVPPCFIASAEFDPLID--DSRLLHQTLQA 280 (326)
T ss_dssp --HCC-CTTTTCCHHHHHHHHHHHCSSGGGGGCTT-----TSGGGSCCSSCCCCEEEEEETTCTTHH--HHHHHHHHHHH
T ss_pred --hhc-CCCCCCCHHHHHHHHHHhCCCCCccCCcc-----cCCCcchhhcCCCCEEEEecCcCcCHH--HHHHHHHHHHH
Confidence 000 00001111122222222221111000000 001112333456699999999999984 44444444432
Q ss_pred ---CceEEEecCCCCcccc-----cChhcHHHHHHHHhc
Q 024681 233 ---RNTVELLKIEGHLPHL-----SAPAIVGPVIRRALS 263 (264)
Q Consensus 233 ---~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~ 263 (264)
.++++++++++|.+.. +..+++.+.+.+||+
T Consensus 281 ~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 319 (326)
T 3ga7_A 281 HQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFM 319 (326)
T ss_dssp TTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHH
Confidence 2799999999997643 234778888888875
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.1e-23 Score=148.63 Aligned_cols=191 Identities=14% Similarity=0.120 Sum_probs=127.2
Q ss_pred CCceEEEecCCCCChhhHH----Hhhhhc--CCceEEEecCC---------------------CCCCCCC--CCCCCccc
Q 024681 16 GDRILVLAHGFGTDQSAWQ----RILPYL--NHHRVIMFDLV---------------------CAGSVNP--DYFDFRRY 66 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~----~~~~~l--~g~~v~~~d~~---------------------g~G~s~~--~~~~~~~~ 66 (264)
..|+|||+||++++...|. .+.+.| .||+|+++|+| |+|.+.. .......+
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~~ 83 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHE 83 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGG
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcch
Confidence 4579999999999999887 456667 49999999999 4454411 00011223
Q ss_pred chHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC------CccceeEEecCCCCCCCCCCCCCCccHHHHHH
Q 024681 67 TTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP------DLFTKLILIGASPRFLNDEDYHGGFEEAEIDK 140 (264)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p------~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
.++.+.++.+.+.++..+ ++++|+||||||.+|+.+|.+++ ..++.++++++.........
T Consensus 84 ~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~------------ 150 (243)
T 1ycd_A 84 LDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPE------------ 150 (243)
T ss_dssp CCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECTT------------
T ss_pred hhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcccc------------
Confidence 357778888887776654 67999999999999999998753 24667777765422100000
Q ss_pred HHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcch
Q 024681 141 VFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV 220 (264)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 220 (264)
.... ...... + . +....+.++++|+++++|++|.++|.
T Consensus 151 --------------------~~~~------------~~~~~~----~-----~-~~~~~~~~~~~P~l~i~G~~D~~vp~ 188 (243)
T 1ycd_A 151 --------------------HPGE------------LRITEK----F-----R-DSFAVKPDMKTKMIFIYGASDQAVPS 188 (243)
T ss_dssp --------------------STTC------------EEECGG----G-----T-TTTCCCTTCCCEEEEEEETTCSSSCH
T ss_pred --------------------cccc------------cccchh----H-----H-HhccCcccCCCCEEEEEeCCCCccCH
Confidence 0000 000000 0 0 00113456789999999999999999
Q ss_pred hhHHHHHHHcCCC------ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 221 SVAEYLQRHLGGR------NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 221 ~~~~~~~~~~~~~------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+.++.+++.+++. ....+++++||.+..+ +++.+.+.+||+
T Consensus 189 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~~~i~~fl~ 235 (243)
T 1ycd_A 189 VRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK--KDIIRPIVEQIT 235 (243)
T ss_dssp HHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC--HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccccEEEecCCCCcCCch--HHHHHHHHHHHH
Confidence 9999998887651 2566777899987655 358888888875
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=150.05 Aligned_cols=202 Identities=13% Similarity=0.084 Sum_probs=125.2
Q ss_pred CCceEEEecCCCCChhhHHHh---hhhc--CCceEEEecCCCCCCCCCCC---CC----------------CcccchHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRI---LPYL--NHHRVIMFDLVCAGSVNPDY---FD----------------FRRYTTLDA 71 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~---~~~l--~g~~v~~~d~~g~G~s~~~~---~~----------------~~~~~~~~~ 71 (264)
..|+||++||++++...|... .+.+ .||.|+++|.||+|.|.... .+ ...+...+.
T Consensus 43 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 122 (278)
T 3e4d_A 43 PCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSY 122 (278)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCccccccCCcCcccchhhHHHH
Confidence 447999999999999888773 3344 59999999999999885432 00 011122344
Q ss_pred HHHHHHHHHHHh-CC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh
Q 024681 72 YVDDLLNILDTL-GV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN 148 (264)
Q Consensus 72 ~~~~~~~~~~~~-~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
.++++...++.. +. ++++++|||+||.+|+.+|.++|+++++++++++........ .....+..
T Consensus 123 ~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-----~~~~~~~~-------- 189 (278)
T 3e4d_A 123 VTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSAD-----WSEPALEK-------- 189 (278)
T ss_dssp HHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGGCT-----TTHHHHHH--------
T ss_pred HHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccCCc-----cchhhHHH--------
Confidence 456777777765 55 789999999999999999999999999999999854321110 00000000
Q ss_pred hhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHH
Q 024681 149 YEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQ 227 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~ 227 (264)
+ + ... .. .+...++.. . ...+ +...|+++++|++|.+++... .+.+.
T Consensus 190 ---~---~-----~~~-~~-------~~~~~~~~~---~---------~~~~-~~~~p~li~~G~~D~~v~~~~~~~~~~ 237 (278)
T 3e4d_A 190 ---Y---L-----GAD-RA-------AWRRYDACS---L---------VEDG-ARFPEFLIDQGKADSFLEKGLRPWLFE 237 (278)
T ss_dssp ---H---H-----CSC-GG-------GGGGGCHHH---H---------HHTT-CCCSEEEEEEETTCTTHHHHTCTHHHH
T ss_pred ---h---c-----CCc-HH-------HHHhcChhh---H---------hhcC-CCCCcEEEEecCCCcccccchhHHHHH
Confidence 0 0 000 00 000000000 0 0001 135699999999999998532 55666
Q ss_pred HHcCCC---ceEEEecCCCCcccc--cChhcHHHHHHHHh
Q 024681 228 RHLGGR---NTVELLKIEGHLPHL--SAPAIVGPVIRRAL 262 (264)
Q Consensus 228 ~~~~~~---~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl 262 (264)
+.+... +++.++++++|.... +.-+++.+.+.++|
T Consensus 238 ~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~l~~~~~~l 277 (278)
T 3e4d_A 238 EAIKGTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAERL 277 (278)
T ss_dssp HHHTTSSCEEEEEEETTCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCceEEEeCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 665442 689999999996432 22244445555444
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=157.38 Aligned_cols=197 Identities=13% Similarity=0.034 Sum_probs=127.5
Q ss_pred CCceEEEecCCCCChhh-HH-Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 16 GDRILVLAHGFGTDQSA-WQ-RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~-~~-~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
.+++|||+||++++... |. .+.+.| .||+|+++|+||+|.++.. . +.+++.+.+..+++..+.++++|+
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~------~-~~~~l~~~i~~~~~~~g~~~v~lV 102 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ------V-NTEYMVNAITALYAGSGNNKLPVL 102 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHH------H-HHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcHH------H-HHHHHHHHHHHHHHHhCCCCEEEE
Confidence 34689999999999987 98 899999 6999999999999876421 1 356677777777777788999999
Q ss_pred ecChhHHHHHHHHHhCC---CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHH
Q 024681 92 GHSVSAMIGLLASIRRP---DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAA 168 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
||||||.++..++..+| ++|+++|+++++..... .. .+ ... . . ......
T Consensus 103 GhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~--------~~-~~---~~~----~----~--------~~~~~~ 154 (317)
T 1tca_A 103 TWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTV--------LA-GP---LDA----L----A--------VSAPSV 154 (317)
T ss_dssp EETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBG--------GG-HH---HHH----T----T--------CBCHHH
T ss_pred EEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCc--------ch-hh---hhh----h----h--------hcCchH
Confidence 99999999999988875 78999999998532110 00 00 000 0 0 000000
Q ss_pred HHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh--HHHHHHHcCCCceEEEe-------
Q 024681 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV--AEYLQRHLGGRNTVELL------- 239 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~------- 239 (264)
.. .. .... +...+... . -....+|+++|+|+.|.++++.. .+.....+++ ++.+.+
T Consensus 155 ----~~-~~-~~s~----f~~~L~~~-~---~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~-a~~~~~~~~~~~~ 219 (317)
T 1tca_A 155 ----WQ-QT-TGSA----LTTALRNA-G---GLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFN-GKNVQAQAVCGPL 219 (317)
T ss_dssp ----HH-TB-TTCH----HHHHHHHT-T---TTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBT-SEEEEHHHHHCTT
T ss_pred ----Hh-hC-cCcH----HHHHHHhc-C---CCCCCCCEEEEEeCCCCeECCccccccchhhhccC-CccEEeeeccCCC
Confidence 00 00 0000 00000000 0 01136899999999999998765 2222333444 343443
Q ss_pred cCCCCcccccChhcHHHHHHHHhc
Q 024681 240 KIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 240 ~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
++.+|..+.++|+. .+.+.+||+
T Consensus 220 ~~~gH~~~l~~p~~-~~~v~~~L~ 242 (317)
T 1tca_A 220 FVIDHAGSLTSQFS-YVVGRSALR 242 (317)
T ss_dssp CCCCTTHHHHBHHH-HHHHHHHHH
T ss_pred CccCcccccCCHHH-HHHHHHHhc
Confidence 47899999999875 467788875
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.90 E-value=9.4e-22 Score=148.76 Aligned_cols=215 Identities=14% Similarity=0.082 Sum_probs=131.4
Q ss_pred EEEeCC-CCce-EEEecCCC---CChhhHHHhhhhc-C--CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 10 VRVVGT-GDRI-LVLAHGFG---TDQSAWQRILPYL-N--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 10 ~~~~g~-~~p~-vv~~hG~~---~~~~~~~~~~~~l-~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
|...+. ..|+ ||++||.+ ++...|..++..| . ||.|+++|+|+++.+..+ . .+++..+.+..+++
T Consensus 71 ~~p~~~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~------~-~~~d~~~a~~~l~~ 143 (322)
T 3k6k_A 71 IRQATDGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFP------A-AVDDCVAAYRALLK 143 (322)
T ss_dssp EEEECTTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCTT------H-HHHHHHHHHHHHHH
T ss_pred EecCCCCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCCc------h-HHHHHHHHHHHHHH
Confidence 444443 4466 99999966 7888899999988 3 999999999998876432 1 35666666666666
Q ss_pred H-hCCCeEEEEecChhHHHHHHHHHhCCCc----cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 82 T-LGVNRCAYVGHSVSAMIGLLASIRRPDL----FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 82 ~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
. ++.++++|+|||+||.+|+.+|.+.|++ ++++|+++|........ ..... .. .
T Consensus 144 ~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~--------~~~~~-----------~~--~ 202 (322)
T 3k6k_A 144 TAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSR--------WSNSN-----------LA--D 202 (322)
T ss_dssp HHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCS--------HHHHH-----------TG--G
T ss_pred cCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCc--------cchhh-----------cc--C
Confidence 5 4567999999999999999999987765 99999999864422110 00000 00 0
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---C
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---R 233 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~ 233 (264)
... .........+...+....... .... ......+. ...|+|+++|++|.++ ..++.+++.+.. .
T Consensus 203 ~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~-----sp~~~~~~-~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~ 270 (322)
T 3k6k_A 203 RDF---LAEPDTLGEMSELYVGGEDRK-NPLI-----SPVYADLS-GLPEMLIHVGSEEALL--SDSTTLAERAGAAGVS 270 (322)
T ss_dssp GCS---SSCHHHHHHHHHHHHTTSCTT-CTTT-----CGGGSCCT-TCCCEEEEEESSCTTH--HHHHHHHHHHHHTTCC
T ss_pred CCC---cCCHHHHHHHHHHhcCCCCCC-CCcC-----Cccccccc-CCCcEEEEECCcCccH--HHHHHHHHHHHHCCCC
Confidence 000 000111111111111100000 0000 00011111 2359999999999985 344454444432 1
Q ss_pred ceEEEecCCCCcccc-----cChhcHHHHHHHHhcC
Q 024681 234 NTVELLKIEGHLPHL-----SAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~ 264 (264)
++++++++++|.+.. +.++++.+.+.+||++
T Consensus 271 ~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (322)
T 3k6k_A 271 VELKIWPDMPHVFQMYGKFVNAADISIKEICHWISA 306 (322)
T ss_dssp EEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHT
T ss_pred EEEEEECCCccccccccccChHHHHHHHHHHHHHHH
Confidence 799999999997654 3467888999999864
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-23 Score=173.31 Aligned_cols=201 Identities=11% Similarity=0.022 Sum_probs=133.9
Q ss_pred CceEEEecCCCCCh---hhHH--Hhhhhc--CCceEEEecCCCCCCCCC-----CCCCCcccchHHHHHHHHHHHHHHh-
Q 024681 17 DRILVLAHGFGTDQ---SAWQ--RILPYL--NHHRVIMFDLVCAGSVNP-----DYFDFRRYTTLDAYVDDLLNILDTL- 83 (264)
Q Consensus 17 ~p~vv~~hG~~~~~---~~~~--~~~~~l--~g~~v~~~d~~g~G~s~~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (264)
.|+||++||.+.+. ..|. .....| .||.|+++|+||+|.+.. .......+ .++++.+.+..+.+.-
T Consensus 496 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~-~~~d~~~~~~~l~~~~~ 574 (723)
T 1xfd_A 496 YPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLL-EEKDQMEAVRTMLKEQY 574 (723)
T ss_dssp EEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTH-HHHHHHHHHHHHHSSSS
T ss_pred cCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcc-cHHHHHHHHHHHHhCCC
Confidence 47999999988763 2332 445556 699999999999998521 00011112 2555555555544431
Q ss_pred -CCCeEEEEecChhHHHHHHHHHhC----CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc
Q 024681 84 -GVNRCAYVGHSVSAMIGLLASIRR----PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP 158 (264)
Q Consensus 84 -~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
+.++++++||||||.+++.+|.++ |++++++|++++....... .. .. .. .+.. .+
T Consensus 575 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~-------~~-~~---~~-------~~~~--~~ 634 (723)
T 1xfd_A 575 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLY-------AS-AF---SE-------RYLG--LH 634 (723)
T ss_dssp EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSS-------BH-HH---HH-------HHHC--CC
T ss_pred cChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHh-------hh-hc---cH-------hhcC--Cc
Confidence 346899999999999999999999 9999999999986432210 00 00 00 0000 00
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcc-cCEEEEecCCCCCcchhhHHHHHHHcCC---Cc
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVR-VPCVIIQTSKDVSVPVSVAEYLQRHLGG---RN 234 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~ 234 (264)
. . ... .....+....+.+++ +|+|+++|++|..+|.+.++.+++.++. .+
T Consensus 635 ~----~---------------~~~-------~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~ 688 (723)
T 1xfd_A 635 G----L---------------DNR-------AYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANY 688 (723)
T ss_dssp S----S---------------CCS-------STTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCC
T ss_pred c----C---------------Chh-------HHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCe
Confidence 0 0 000 000112223456777 7999999999999999998888887732 27
Q ss_pred eEEEecCCCCcc-cccChhcHHHHHHHHhcC
Q 024681 235 TVELLKIEGHLP-HLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 235 ~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~ 264 (264)
++++++++||.+ ..+.++++.+.+.+||++
T Consensus 689 ~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 719 (723)
T 1xfd_A 689 SLQIYPDESHYFTSSSLKQHLYRSIINFFVE 719 (723)
T ss_dssp EEEEETTCCSSCCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCcccccCcchHHHHHHHHHHHHH
Confidence 999999999987 667889999999999864
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-22 Score=145.09 Aligned_cols=195 Identities=10% Similarity=0.008 Sum_probs=128.9
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeEEEEec
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRCAYVGH 93 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~ 93 (264)
++++|||+||++++...|..+++.| .+++|+++|+||++ +.++++.+.++.+. .++++++||
T Consensus 21 ~~~~l~~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~g~~----------------~~~~~~~~~i~~~~~~~~~~l~Gh 84 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIYFKDLALQLNHKAAVYGFHFIEED----------------SRIEQYVSRITEIQPEGPYVLLGY 84 (244)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHTTTTSEEEEECCCCST----------------THHHHHHHHHHHHCSSSCEEEEEE
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhCCCceEEEEcCCCHH----------------HHHHHHHHHHHHhCCCCCEEEEEE
Confidence 4579999999999999999999999 99999999999863 13456666666664 479999999
Q ss_pred ChhHHHHHHHHHhC---CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHH
Q 024681 94 SVSAMIGLLASIRR---PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVR 170 (264)
Q Consensus 94 S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
||||.+|+.+|.+. ++++.++|++++..... .+.. ... .. .+ .. .+ .+....
T Consensus 85 S~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~---~~~~-~~~---~~---~~----~~--------~~---~~~~~~ 139 (244)
T 2cb9_A 85 SAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQ---SITA-DTE---ND---DS----AA--------YL---PEAVRE 139 (244)
T ss_dssp THHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCS---CCCC-C-----------------C--------CS---CHHHHH
T ss_pred CHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcc---cccc-ccc---HH---HH----HH--------Hh---HHHHHH
Confidence 99999999999875 57899999999864311 0100 000 00 00 00 00 000111
Q ss_pred HHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecC--CCCCcchhhHHHHHHHcCCCceEEEecCCCC--cc
Q 024681 171 EFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTS--KDVSVPVSVAEYLQRHLGGRNTVELLKIEGH--LP 246 (264)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~--~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH--~~ 246 (264)
.+..... ....+... ......+++|+++++|+ +|.+ +++....+.+..+...++..++ +|| ++
T Consensus 140 ~~~~~~~-----~~~~~~~~------~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~~~~~~~~i~-ggH~~~~ 206 (244)
T 2cb9_A 140 TVMQKKR-----CYQEYWAQ------LINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAEEGYAEYTGY-GAHKDML 206 (244)
T ss_dssp HHTHHHH-----HHHHHHHH------CCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBSSCEEEEECS-SBGGGTT
T ss_pred HHHHHHH-----HHHHHHHh------hccCCCcCCCEEEEEccCccccc-cccchhHHHHhcCCCCEEEEec-CChHHHc
Confidence 1100000 00000000 02346789999999999 8874 4444455556665337899999 599 77
Q ss_pred cccChhcHHHHHHHHhcC
Q 024681 247 HLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 247 ~~~~~~~~~~~i~~fl~~ 264 (264)
..++++++++.|.+||.+
T Consensus 207 ~~~~~~~~~~~i~~~L~~ 224 (244)
T 2cb9_A 207 EGEFAEKNANIILNILDK 224 (244)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHhc
Confidence 778899999999999863
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-23 Score=153.47 Aligned_cols=102 Identities=17% Similarity=0.165 Sum_probs=79.9
Q ss_pred CceEEEecCCCCCh---hhHHHhhhhc-C---CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-C-Ce
Q 024681 17 DRILVLAHGFGTDQ---SAWQRILPYL-N---HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-V-NR 87 (264)
Q Consensus 17 ~p~vv~~hG~~~~~---~~~~~~~~~l-~---g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 87 (264)
.++|||+||++++. ..|..+.+.| + |++|+++|+ |+|.|.... .....++.+.++++.+.++... . ++
T Consensus 5 ~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~--~~~~~~~~~~~~~~~~~l~~~~~l~~~ 81 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVE--NSFFLNVNSQVTTVCQILAKDPKLQQG 81 (279)
T ss_dssp SCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHH--HHHHSCHHHHHHHHHHHHHSCGGGTTC
T ss_pred CCcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccc--cccccCHHHHHHHHHHHHHhhhhccCC
Confidence 35799999999887 7899999998 3 779999998 999874210 0001236677777777776531 1 79
Q ss_pred EEEEecChhHHHHHHHHHhCCCc-cceeEEecCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPDL-FTKLILIGASP 121 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~ 121 (264)
++++||||||.++..++.++|++ |+++|+++++.
T Consensus 82 ~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 82 YNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 99999999999999999999984 99999998753
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-22 Score=143.74 Aligned_cols=206 Identities=10% Similarity=0.068 Sum_probs=128.9
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEec
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGH 93 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~ 93 (264)
++++|+++||++++...|..+.+.| . ++|+++|+||+|. .++++.+.++.+.. ++++++||
T Consensus 16 ~~~~l~~~hg~~~~~~~~~~~~~~l~~-~~v~~~d~~g~~~----------------~~~~~~~~i~~~~~~~~~~l~G~ 78 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGLMYQNLSSRLPS-YKLCAFDFIEEED----------------RLDRYADLIQKLQPEGPLTLFGY 78 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHCTT-EEEEEECCCCSTT----------------HHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CCCCEEEECCCCCchHHHHHHHHhcCC-CeEEEecCCCHHH----------------HHHHHHHHHHHhCCCCCeEEEEE
Confidence 4579999999999999999999999 8 9999999998762 23355566666654 58999999
Q ss_pred ChhHHHHHHHHHhCC---CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHH
Q 024681 94 SVSAMIGLLASIRRP---DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVR 170 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
|+||.+|+.+|.+.+ +++++++++++....... .+. ......... .+.... .............
T Consensus 79 S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~-~~~----~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~ 145 (230)
T 1jmk_C 79 SAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVS-DLD----GRTVESDVE-------ALMNVN-RDNEALNSEAVKH 145 (230)
T ss_dssp THHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC-------------CCHH-------HHHHHT-TTCSGGGSHHHHH
T ss_pred CHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCccc-ccc----cccHHHHHH-------HHHhcC-hhhhhhhhHHHHH
Confidence 999999999998754 679999999976432111 000 000000000 000000 0000000000111
Q ss_pred HHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCC--cccc
Q 024681 171 EFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGH--LPHL 248 (264)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH--~~~~ 248 (264)
.+.... .....+.. ......++++|+++++|++|..++ .....+.+..+...+++.+++ || ++..
T Consensus 146 ~~~~~~-----~~~~~~~~------~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~~~~~~~~~~~i~g-~H~~~~~~ 212 (230)
T 1jmk_C 146 GLKQKT-----HAFYSYYV------NLISTGQVKADIDLLTSGADFDIP-EWLASWEEATTGAYRMKRGFG-THAEMLQG 212 (230)
T ss_dssp HHHHHH-----HHHHHHHH------HCCCCSCBSSEEEEEECSSCCCCC-TTEECSGGGBSSCEEEEECSS-CGGGTTSH
T ss_pred HHHHHH-----HHHHHHhh------hccccccccccEEEEEeCCCCCCc-cccchHHHhcCCCeEEEEecC-ChHHHcCc
Confidence 111000 00000000 002346789999999999999887 333444555543378999995 99 8888
Q ss_pred cChhcHHHHHHHHhcC
Q 024681 249 SAPAIVGPVIRRALSR 264 (264)
Q Consensus 249 ~~~~~~~~~i~~fl~~ 264 (264)
++++.+.+.|.+||.+
T Consensus 213 ~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 213 ETLDRNAGILLEFLNT 228 (230)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HhHHHHHHHHHHHHhh
Confidence 8899999999999864
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-23 Score=172.04 Aligned_cols=203 Identities=12% Similarity=0.123 Sum_probs=131.2
Q ss_pred CceEEEecCCCCChh---hHH-Hhhhhc---CCceEEEecCCCCCCCCCCCCC--Cccc--chHHHHHHHHHHHHHH--h
Q 024681 17 DRILVLAHGFGTDQS---AWQ-RILPYL---NHHRVIMFDLVCAGSVNPDYFD--FRRY--TTLDAYVDDLLNILDT--L 83 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~---~~~-~~~~~l---~g~~v~~~d~~g~G~s~~~~~~--~~~~--~~~~~~~~~~~~~~~~--~ 83 (264)
.|+||++||.+++.. .|. .+...| +||.|+++|+||+|.+...... ...+ ...+++.+.+..+.+. +
T Consensus 496 ~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 575 (719)
T 1z68_A 496 YPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFI 575 (719)
T ss_dssp EEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCE
T ss_pred ccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCC
Confidence 478999999887643 332 234433 7999999999999998532000 0001 1233444444444332 1
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
+.++++++|||+||.+++.+|.++|++++++|++++....... .. .. .. .+. . . .
T Consensus 576 d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-------~~-~~---~~-------~~~---g-~---~ 630 (719)
T 1z68_A 576 DEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYY-------AS-VY---TE-------RFM---G-L---P 630 (719)
T ss_dssp EEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTS-------BH-HH---HH-------HHH---C-C---S
T ss_pred CCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHh-------cc-cc---ch-------hhc---C-C---c
Confidence 2358999999999999999999999999999999986432110 00 00 00 000 0 0 0
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCccc-CEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEe
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRV-PCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELL 239 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~ 239 (264)
........+. ..+....+.++++ |+|+++|++|..+|.+.++.+.+.+++. ++++++
T Consensus 631 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 691 (719)
T 1z68_A 631 TKDDNLEHYK-------------------NSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 691 (719)
T ss_dssp STTTTHHHHH-------------------HTCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ccccchhhhh-------------------hCCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEE
Confidence 0000000000 0122233456677 8999999999999999988888876432 579999
Q ss_pred cCCCCcccccChhcHHHHHHHHhc
Q 024681 240 KIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 240 ~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++||.+..+.++++.+.+.+||+
T Consensus 692 ~~~gH~~~~~~~~~~~~~i~~fl~ 715 (719)
T 1z68_A 692 SDQNHGLSGLSTNHLYTHMTHFLK 715 (719)
T ss_dssp TTCCTTCCTHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCcccHHHHHHHHHHHHH
Confidence 999999877778999999999986
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-22 Score=150.62 Aligned_cols=214 Identities=17% Similarity=0.035 Sum_probs=127.1
Q ss_pred EEEEeCCCCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH-
Q 024681 9 HVRVVGTGDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD- 81 (264)
Q Consensus 9 ~~~~~g~~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (264)
.|...+...|+||++||.+ ++...|..++..| .||.|+++|+|+.++...+ . .+++..+.+..+.+
T Consensus 77 ~~~P~~~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p----~---~~~D~~~a~~~l~~~ 149 (317)
T 3qh4_A 77 IYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYP----A---ALHDAIEVLTWVVGN 149 (317)
T ss_dssp EEECSCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT----H---HHHHHHHHHHHHHHT
T ss_pred EEecCCCCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCc----h---HHHHHHHHHHHHHhh
Confidence 3444444558999999977 6777788888888 4999999999987765321 1 13333333333333
Q ss_pred --HhCC--CeEEEEecChhHHHHHHHHHhCCC----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh
Q 024681 82 --TLGV--NRCAYVGHSVSAMIGLLASIRRPD----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA 153 (264)
Q Consensus 82 --~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
.+++ ++++++|||+||.+|+.+|.+.++ .++++++++|..... . ...... .
T Consensus 150 ~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~-~--------~~~~~~-----------~- 208 (317)
T 3qh4_A 150 ATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR-P--------TASRSE-----------F- 208 (317)
T ss_dssp HHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-C--------CHHHHH-----------T-
T ss_pred HHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-C--------CcCHHH-----------h-
Confidence 3454 489999999999999999987655 489999999864432 0 000000 0
Q ss_pred hhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcc--hhhHHHHHHHcC
Q 024681 154 YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVP--VSVAEYLQRHLG 231 (264)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~ 231 (264)
... ..........+...+....... ... .......+.. -.|+++++|+.|.+++ ....+.+.+...
T Consensus 209 ---~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~----~p~~~~~l~~-lpP~li~~G~~D~~~~~~~~~a~~l~~~g~ 276 (317)
T 3qh4_A 209 ---RAT--PAFDGEAASLMWRHYLAGQTPS--PES----VPGRRGQLAG-LPATLITCGEIDPFRDEVLDYAQRLLGAGV 276 (317)
T ss_dssp ---TTC--SSSCHHHHHHHHHHHHTTCCCC--TTT----CGGGCSCCTT-CCCEEEEEEEESTTHHHHHHHHHHHHHTTC
T ss_pred ---cCC--CCcCHHHHHHHHHHhcCCCCCC--ccc----CCCcccccCC-CCceeEEecCcCCCchhHHHHHHHHHHcCC
Confidence 000 0000111111111111110000 000 0000011121 1399999999999987 445566666555
Q ss_pred CCceEEEecCCCCccc-----ccChhcHHHHHHHHhc
Q 024681 232 GRNTVELLKIEGHLPH-----LSAPAIVGPVIRRALS 263 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~-----~~~~~~~~~~i~~fl~ 263 (264)
. ++++++++++|.+. .+.++++.+.+.+||+
T Consensus 277 ~-~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~ 312 (317)
T 3qh4_A 277 S-TELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALA 312 (317)
T ss_dssp C-EEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHH
T ss_pred C-EEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHH
Confidence 5 89999999999743 3556788888888885
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-22 Score=166.08 Aligned_cols=208 Identities=13% Similarity=0.092 Sum_probs=129.7
Q ss_pred CCceEEEecCCCCChh--hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh------CC
Q 024681 16 GDRILVLAHGFGTDQS--AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL------GV 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~--~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 85 (264)
..|+||++||.+.... .|......| +||.|+++|+||+|.+.................+|+.++++++ +.
T Consensus 445 ~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~ 524 (695)
T 2bkl_A 445 NAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQP 524 (695)
T ss_dssp CCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCG
T ss_pred CccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCc
Confidence 4589999999665543 455555555 9999999999999877431000011111223344444444444 34
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
++++++|||+||.+++.++.++|++++++|+..+............ ...+...+. ....
T Consensus 525 ~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~-----------------~~~~~~~~g----~~~~ 583 (695)
T 2bkl_A 525 KRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGS-----------------GRTWIPEYG----TAEK 583 (695)
T ss_dssp GGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTT-----------------GGGGHHHHC----CTTS
T ss_pred ccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCC-----------------CcchHHHhC----CCCC
Confidence 6899999999999999999999999999999998654321100000 000000000 0011
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcc--cCEEEEecCCCCCcchhhHHHHHHHcCC------CceEE
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVR--VPCVIIQTSKDVSVPVSVAEYLQRHLGG------RNTVE 237 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~~ 237 (264)
.+....+. ..+....+.+++ .|+|+++|++|..+++..++.+.+.++. .++++
T Consensus 584 ~~~~~~~~-------------------~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 644 (695)
T 2bkl_A 584 PEDFKTLH-------------------AYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLR 644 (695)
T ss_dssp HHHHHHHH-------------------HHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEE
T ss_pred HHHHHHHH-------------------hcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEE
Confidence 11111000 011122344444 6999999999999999999988888754 27899
Q ss_pred EecCCCCccc--ccChhcHHHHHHHHhc
Q 024681 238 LLKIEGHLPH--LSAPAIVGPVIRRALS 263 (264)
Q Consensus 238 ~~~~~gH~~~--~~~~~~~~~~i~~fl~ 263 (264)
+++++||.+. .+++.+....+.+||.
T Consensus 645 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 672 (695)
T 2bkl_A 645 IEANAGHGGADQVAKAIESSVDLYSFLF 672 (695)
T ss_dssp EETTCBTTBCSCHHHHHHHHHHHHHHHH
T ss_pred EeCCCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999873 3445667777888875
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-21 Score=147.53 Aligned_cols=208 Identities=13% Similarity=0.084 Sum_probs=125.6
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-hCCCeE
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT-LGVNRC 88 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 88 (264)
..|+||++||.+ ++...|..++..| .||.|+++|+|+.++...+ . .+++..+.+..+.+. ++.+++
T Consensus 79 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~------~-~~~D~~~a~~~l~~~~~d~~ri 151 (322)
T 3fak_A 79 AGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFP------A-AVEDGVAAYRWLLDQGFKPQHL 151 (322)
T ss_dssp TTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT------H-HHHHHHHHHHHHHHHTCCGGGE
T ss_pred CccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCC------c-HHHHHHHHHHHHHHcCCCCceE
Confidence 458999999966 6778888888888 4999999999987655321 1 355666666666655 344689
Q ss_pred EEEecChhHHHHHHHHHhCCCc----cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRPDL----FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~~----v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
+|+|||+||.+|+.++.+.+++ ++++|+++|......... ... ... ........
T Consensus 152 ~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~--------~~~-----------~~~--~~~~~~~~- 209 (322)
T 3fak_A 152 SISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTND--------SFK-----------TRA--EADPMVAP- 209 (322)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCT--------HHH-----------HTT--TTCCSCCS-
T ss_pred EEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCc--------CHH-----------HhC--ccCcccCH-
Confidence 9999999999999999887664 999999998654321100 000 000 00000000
Q ss_pred ChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---CceEEEecC
Q 024681 165 VPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTVELLKI 241 (264)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~ 241 (264)
.....+...+....... .... ......+..+ .|+++++|+.|.+++ ....+++.+.. .++++++++
T Consensus 210 --~~~~~~~~~~~~~~~~~-~~~~-----sp~~~~~~~~-pP~li~~g~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g 278 (322)
T 3fak_A 210 --GGINKMAARYLNGADAK-HPYA-----SPNFANLKGL-PPLLIHVGRDEVLLD--DSIKLDAKAKADGVKSTLEIWDD 278 (322)
T ss_dssp --SHHHHHHHHHHTTSCTT-CTTT-----CGGGSCCTTC-CCEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETT
T ss_pred --HHHHHHHHHhcCCCCCC-Cccc-----CCCcccccCC-ChHhEEEcCcCccHH--HHHHHHHHHHHcCCCEEEEEeCC
Confidence 11111111111100000 0000 0011112222 399999999998854 44445444432 179999999
Q ss_pred CCCcccc-----cChhcHHHHHHHHhc
Q 024681 242 EGHLPHL-----SAPAIVGPVIRRALS 263 (264)
Q Consensus 242 ~gH~~~~-----~~~~~~~~~i~~fl~ 263 (264)
++|.+.. +..+++.+.+.+||+
T Consensus 279 ~~H~~~~~~~~~~~~~~~~~~i~~fl~ 305 (322)
T 3fak_A 279 MIHVWHAFHPMLPEGKQAIVRVGEFMR 305 (322)
T ss_dssp CCTTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred ceeehhhccCCCHHHHHHHHHHHHHHH
Confidence 9997653 335778888888875
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=169.55 Aligned_cols=202 Identities=12% Similarity=0.096 Sum_probs=129.5
Q ss_pred CceEEEecCCCCCh---hhHH-Hhhhhc---CCceEEEecCCCCCCCCCCC-----CCCcccchHHHHHHHHHHHHHHh-
Q 024681 17 DRILVLAHGFGTDQ---SAWQ-RILPYL---NHHRVIMFDLVCAGSVNPDY-----FDFRRYTTLDAYVDDLLNILDTL- 83 (264)
Q Consensus 17 ~p~vv~~hG~~~~~---~~~~-~~~~~l---~g~~v~~~d~~g~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~~- 83 (264)
.|+||++||.+++. ..|. .+...| +||.|+++|+||+|.+.... ...... ..+++.+.+..+.+.-
T Consensus 502 ~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~-~~~D~~~~i~~l~~~~~ 580 (740)
T 4a5s_A 502 YPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTF-EVEDQIEAARQFSKMGF 580 (740)
T ss_dssp EEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSH-HHHHHHHHHHHHHTSTT
T ss_pred ccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcc-cHHHHHHHHHHHHhcCC
Confidence 37999999988763 2232 233334 79999999999999764310 001111 2444444444443221
Q ss_pred -CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 84 -GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 84 -~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
+.+++.|+||||||.+++.+|.++|++++++|+++|...+... .. . +...+......
T Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~-------~~-~--------------~~~~~~~~p~~ 638 (740)
T 4a5s_A 581 VDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYY-------DS-V--------------YTERYMGLPTP 638 (740)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGS-------BH-H--------------HHHHHHCCSST
T ss_pred cCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHh-------hh-H--------------HHHHHcCCCCc
Confidence 2268999999999999999999999999999999986432110 00 0 00000000000
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCccc-CEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEE
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRV-PCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVEL 238 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~ 238 (264)
.. ....+ ...+....+.+++. |+|+++|+.|..+|.+.+..+.+.+... +++.+
T Consensus 639 ~~---~~~~~-------------------~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~ 696 (740)
T 4a5s_A 639 ED---NLDHY-------------------RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMW 696 (740)
T ss_dssp TT---THHHH-------------------HHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEE
T ss_pred cc---cHHHH-------------------HhCCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEE
Confidence 00 00000 01122234556676 9999999999999999888888776431 68999
Q ss_pred ecCCCCcc-cccChhcHHHHHHHHhc
Q 024681 239 LKIEGHLP-HLSAPAIVGPVIRRALS 263 (264)
Q Consensus 239 ~~~~gH~~-~~~~~~~~~~~i~~fl~ 263 (264)
+|+++|.+ ..+.++++.+.+.+||+
T Consensus 697 ~~~~~H~~~~~~~~~~~~~~i~~fl~ 722 (740)
T 4a5s_A 697 YTDEDHGIASSTAHQHIYTHMSHFIK 722 (740)
T ss_dssp ETTCCTTCCSHHHHHHHHHHHHHHHH
T ss_pred ECCCCCcCCCCccHHHHHHHHHHHHH
Confidence 99999987 66778889999999985
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=7.6e-22 Score=146.61 Aligned_cols=203 Identities=12% Similarity=0.024 Sum_probs=119.6
Q ss_pred CCceEEEecCCCCChhhHHHh---hhhc--CCceEEEecC--CCCCCCCCC-------------CCCCc----ccchHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRI---LPYL--NHHRVIMFDL--VCAGSVNPD-------------YFDFR----RYTTLDA 71 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~---~~~l--~g~~v~~~d~--~g~G~s~~~-------------~~~~~----~~~~~~~ 71 (264)
..|+||++||++++...|... .+.+ .||.|+++|. ||+|.+... ..... .+.....
T Consensus 44 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 3fcx_A 44 KCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSY 123 (282)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCcccccccCcccccchhhHHHH
Confidence 347999999999998888765 4555 7999999999 766553211 00000 1122344
Q ss_pred HHHHHHHHHH-HhCC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh
Q 024681 72 YVDDLLNILD-TLGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN 148 (264)
Q Consensus 72 ~~~~~~~~~~-~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
..+++...++ .++. ++++++|||+||.+|+.+|.++|+++++++++++...... .......
T Consensus 124 ~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~---------~~~~~~~------- 187 (282)
T 3fcx_A 124 VTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL---------CPWGKKA------- 187 (282)
T ss_dssp HHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGG---------SHHHHHH-------
T ss_pred HHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCccc---------CchhHHH-------
Confidence 5556766666 4443 6899999999999999999999999999999998543111 0000000
Q ss_pred hhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh------
Q 024681 149 YEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV------ 222 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~------ 222 (264)
+... +.. . ...+...++ ......+..+.+|+++++|++|.++|...
T Consensus 188 ~~~~---~~~-----~--------~~~~~~~~~------------~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~ 239 (282)
T 3fcx_A 188 FSGY---LGT-----D--------QSKWKAYDA------------THLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNF 239 (282)
T ss_dssp HHHH---HC----------------CCGGGGCH------------HHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHH
T ss_pred HHHh---cCC-----c--------hhhhhhcCH------------HHHHHhcccCCCcEEEEcCCCCcccccchhhHHHH
Confidence 0000 000 0 000000000 01112234558899999999999986543
Q ss_pred HHHHHHHcCCCceEEEecCCCCccccc--ChhcHHHHHHHHhc
Q 024681 223 AEYLQRHLGGRNTVELLKIEGHLPHLS--APAIVGPVIRRALS 263 (264)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~ 263 (264)
.+.+.+.-.. +++.++++++|....- .-++..+.+.++|+
T Consensus 240 ~~~l~~~g~~-~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 240 IAACTEKKIP-VVFRLQEDYDHSYYFIATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHTTCC-EEEEEETTCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCc-eEEEECCCCCcCHHHHHhhhHHHHHHHHHhhc
Confidence 3334443334 7999999999964321 22445556666654
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.6e-22 Score=164.73 Aligned_cols=208 Identities=13% Similarity=0.053 Sum_probs=124.2
Q ss_pred CCceEEEecCCCCChh--hHHHhhhhc--CCceEEEecCCCCCCCCCCCCC----CcccchHHHHHHHHHHHHHH--hCC
Q 024681 16 GDRILVLAHGFGTDQS--AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFD----FRRYTTLDAYVDDLLNILDT--LGV 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~--~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~ 85 (264)
..|+||++||.++... .|......| +||.|+++|+||+|.+...... ......++++.+.+..+++. .+.
T Consensus 487 ~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~ 566 (741)
T 1yr2_A 487 PLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPR 566 (741)
T ss_dssp CCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCT
T ss_pred CCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCh
Confidence 4589999999876553 454555555 8999999999999987321000 00111245555555555544 244
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
++++++|||+||.+++.++.++|++++++|+..+............ ...+...+. ....
T Consensus 567 ~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~-----------------~~~~~~~~g----~~~~ 625 (741)
T 1yr2_A 567 HGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTA-----------------GRYWVDDYG----YPEK 625 (741)
T ss_dssp TCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTT-----------------GGGGHHHHC----CTTS
T ss_pred HHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCC-----------------CchhHHHcC----CCCC
Confidence 7999999999999999999999999999999988643321100000 000000000 0000
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCC-ccc-CEEEEecCCCCCcchhhHHHHHHHcCC------CceEE
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGL-VRV-PCVIIQTSKDVSVPVSVAEYLQRHLGG------RNTVE 237 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~~ 237 (264)
.+.. .. +...+....+.. +++ |+|+++|++|..+++..+.++.+.++. .++++
T Consensus 626 ~~~~----~~---------------~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~ 686 (741)
T 1yr2_A 626 EADW----RV---------------LRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIR 686 (741)
T ss_dssp HHHH----HH---------------HHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEE
T ss_pred HHHH----HH---------------HHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEE
Confidence 1110 00 111122233444 674 999999999999999988888877654 27889
Q ss_pred EecCCCCcccccC--hhcHHHHHHHHhc
Q 024681 238 LLKIEGHLPHLSA--PAIVGPVIRRALS 263 (264)
Q Consensus 238 ~~~~~gH~~~~~~--~~~~~~~i~~fl~ 263 (264)
+++++||.+.... ..++.+.+.+||.
T Consensus 687 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 714 (741)
T 1yr2_A 687 IETRAGHGSGKPIDKQIEETADVQAFLA 714 (741)
T ss_dssp EC---------CHHHHHHHHHHHHHHHH
T ss_pred EeCCCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999876543 3467778888874
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.5e-21 Score=141.14 Aligned_cols=106 Identities=17% Similarity=0.233 Sum_probs=79.0
Q ss_pred CCceEEEecCCCCChhhHHHh---hhhc--CCceEEEecCCCCCCCCCCCCC--------------C----cccchHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRI---LPYL--NHHRVIMFDLVCAGSVNPDYFD--------------F----RRYTTLDAY 72 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~---~~~l--~g~~v~~~d~~g~G~s~~~~~~--------------~----~~~~~~~~~ 72 (264)
..|+||++||++++...|... ...+ .|+.|+++|.+++|.+.+.... . ..+......
T Consensus 46 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~ 125 (280)
T 3i6y_A 46 KVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYV 125 (280)
T ss_dssp CEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHH
T ss_pred CccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccCccccccccCCCccchhhHHHHH
Confidence 348999999999998888764 3344 6999999999988765332100 0 011213445
Q ss_pred HHHHHHHHHHh-CC-CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 73 VDDLLNILDTL-GV-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 73 ~~~~~~~~~~~-~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.+++..+++.. .. ++++|+|||+||.+|+.+|.++|+++++++++++..
T Consensus 126 ~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 176 (280)
T 3i6y_A 126 VNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPIN 176 (280)
T ss_dssp HTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCC
T ss_pred HHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCcc
Confidence 56777777543 44 789999999999999999999999999999999854
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-20 Score=143.50 Aligned_cols=104 Identities=13% Similarity=0.084 Sum_probs=74.4
Q ss_pred CceEEEecCCCCChhh-----------HHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcc----cchHHHHHHHHHHH
Q 024681 17 DRILVLAHGFGTDQSA-----------WQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRR----YTTLDAYVDDLLNI 79 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~-----------~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~----~~~~~~~~~~~~~~ 79 (264)
.|+||++||++++... |..++..| +||+|+++|+||+|.|......... ..++.+.++++..+
T Consensus 79 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~ 158 (397)
T 3h2g_A 79 YPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSV 158 (397)
T ss_dssp EEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHH
Confidence 4789999999987654 55667777 8999999999999999643111111 12356677777788
Q ss_pred HHHhCC---CeEEEEecChhHHHHHHHHHh-CCC-----ccceeEEecCC
Q 024681 80 LDTLGV---NRCAYVGHSVSAMIGLLASIR-RPD-----LFTKLILIGAS 120 (264)
Q Consensus 80 ~~~~~~---~~~~l~G~S~Gg~~a~~~a~~-~p~-----~v~~~vl~~~~ 120 (264)
++.++. ++++++||||||.+++.+|.. .++ .+.+++..+++
T Consensus 159 ~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 208 (397)
T 3h2g_A 159 LQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGP 208 (397)
T ss_dssp HHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCC
T ss_pred HHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccc
Confidence 888876 699999999999999888732 221 45666665553
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-21 Score=142.55 Aligned_cols=174 Identities=18% Similarity=0.159 Sum_probs=116.7
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc----CCceEEEecCC------CCCCCCCC------CCCCcccchHHHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL----NHHRVIMFDLV------CAGSVNPD------YFDFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l----~g~~v~~~d~~------g~G~s~~~------~~~~~~~~~~~~~~~~~~~~ 79 (264)
..|+|||+||+|++...|..+++.| .++.+++++-| |.|.+--. .........+...++++.++
T Consensus 65 ~~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~~ 144 (285)
T 4fhz_A 65 ATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDAF 144 (285)
T ss_dssp CSEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHHHH
Confidence 3478999999999999998888776 47888888754 33332100 00000011233334455555
Q ss_pred HHH----hCC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh
Q 024681 80 LDT----LGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA 153 (264)
Q Consensus 80 ~~~----~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
++. .++ ++++++|+|+||.+++.++.++|+++.++|.+++.... .
T Consensus 145 i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~-----------~------------------ 195 (285)
T 4fhz_A 145 LDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA-----------P------------------ 195 (285)
T ss_dssp HHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC-----------H------------------
T ss_pred HHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC-----------c------------------
Confidence 443 344 58999999999999999999999999999998863110 0
Q ss_pred hhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC-
Q 024681 154 YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG- 232 (264)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 232 (264)
.... . ..+.+.|++++||++|.++|.+..+++.+.+..
T Consensus 196 -------------~~~~---~-------------------------~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~ 234 (285)
T 4fhz_A 196 -------------ERLA---E-------------------------EARSKPPVLLVHGDADPVVPFADMSLAGEALAEA 234 (285)
T ss_dssp -------------HHHH---H-------------------------HCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHT
T ss_pred -------------hhhh---h-------------------------hhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHC
Confidence 0000 0 012367999999999999999988887776643
Q ss_pred --CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 233 --RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 233 --~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.++++++++.||.+.. ++ .+.+.+||+
T Consensus 235 g~~~~~~~y~g~gH~i~~---~~-l~~~~~fL~ 263 (285)
T 4fhz_A 235 GFTTYGHVMKGTGHGIAP---DG-LSVALAFLK 263 (285)
T ss_dssp TCCEEEEEETTCCSSCCH---HH-HHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCH---HH-HHHHHHHHH
Confidence 2788999999998643 33 344556654
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-20 Score=154.68 Aligned_cols=214 Identities=15% Similarity=0.101 Sum_probs=124.1
Q ss_pred hhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC--------------------CeEEEEecCh
Q 024681 38 PYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--------------------NRCAYVGHSV 95 (264)
Q Consensus 38 ~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~G~S~ 95 (264)
..| +||.|+++|.||+|.|+... ..+. .+.++|+.++++++.. .+|.++||||
T Consensus 275 ~~la~~GYaVv~~D~RG~G~S~G~~---~~~~--~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~Sy 349 (763)
T 1lns_A 275 DYFLTRGFASIYVAGVGTRSSDGFQ---TSGD--YQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSY 349 (763)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCC---CTTS--HHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETH
T ss_pred HHHHHCCCEEEEECCCcCCCCCCcC---CCCC--HHHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECH
Confidence 455 89999999999999997541 2222 2567888888888762 3899999999
Q ss_pred hHHHHHHHHHhCCCccceeEEecCCCCCCC---CC---CCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHH
Q 024681 96 SAMIGLLASIRRPDLFTKLILIGASPRFLN---DE---DYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAV 169 (264)
Q Consensus 96 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
||.+++.+|.++|+.++++|..++...... .. .............+.... .....................
T Consensus 350 GG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~---~~~~~~~g~~~~~~~~~~~~~ 426 (763)
T 1lns_A 350 LGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALT---YSRNLDGADFLKGNAEYEKRL 426 (763)
T ss_dssp HHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHH---CGGGGSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHH---HhhhcCcchhhhHHHHHHHHH
Confidence 999999999999999999999988642110 00 000000000000000000 000000000000000000000
Q ss_pred HHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC-CceEEEecCCCCcccc
Q 024681 170 REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG-RNTVELLKIEGHLPHL 248 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~ 248 (264)
..+........+. ...+ +...+....+.+|++|+|+++|..|..+++..+.++++.+++ .....++.++||..+.
T Consensus 427 ~~~~~~~~~~~~~-~~~~---w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~i~~~gH~~~~ 502 (763)
T 1lns_A 427 AEMTAALDRKSGD-YNQF---WHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMN 502 (763)
T ss_dssp HHHHHHHCTTTCC-CCHH---HHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEESCSSCCCT
T ss_pred HHHHhhhhhccCc-hhHH---hhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEEEEeCCcccCcc
Confidence 1111000000110 0011 112344566788999999999999999999999999999874 2233455679998765
Q ss_pred c-ChhcHHHHHHHHhc
Q 024681 249 S-APAIVGPVIRRALS 263 (264)
Q Consensus 249 ~-~~~~~~~~i~~fl~ 263 (264)
+ .+.++.+.+.+||+
T Consensus 503 ~~~~~~~~~~i~~Ffd 518 (763)
T 1lns_A 503 SWQSIDFSETINAYFV 518 (763)
T ss_dssp TBSSCCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHH
Confidence 5 55667777777774
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=161.93 Aligned_cols=208 Identities=11% Similarity=0.044 Sum_probs=128.9
Q ss_pred CCceEEEecCCCCChh--hHHHhhhhc---CCceEEEecCCCCCCCCCCCC----CCcccchHHHHHHHHHHHHHH--hC
Q 024681 16 GDRILVLAHGFGTDQS--AWQRILPYL---NHHRVIMFDLVCAGSVNPDYF----DFRRYTTLDAYVDDLLNILDT--LG 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~--~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~ 84 (264)
..|+||++||.++... .|......| +||.|+++|+||+|.+..... .......++++.+.+..+++. .+
T Consensus 465 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~ 544 (710)
T 2xdw_A 465 SHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTS 544 (710)
T ss_dssp CSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCC
T ss_pred CccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCC
Confidence 3589999999776543 343333344 699999999999998732100 001111244555555555443 23
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
.++++++|||+||.+++.++.++|++++++|+.++........... ....|...+. ...
T Consensus 545 ~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~-----------------~~~~~~~~~g----~~~ 603 (710)
T 2xdw_A 545 PKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT-----------------IGHAWTTDYG----CSD 603 (710)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST-----------------TGGGGHHHHC----CTT
T ss_pred cceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccC-----------------CChhHHHhCC----CCC
Confidence 4689999999999999999999999999999999864322110000 0000100000 001
Q ss_pred ChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccC-----Cccc-CEEEEecCCCCCcchhhHHHHHHHcCC------
Q 024681 165 VPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILG-----LVRV-PCVIIQTSKDVSVPVSVAEYLQRHLGG------ 232 (264)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~------ 232 (264)
..+....+.. .+....+. ++++ |+|+++|++|..+++..+.++.+.++.
T Consensus 604 ~~~~~~~~~~-------------------~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 664 (710)
T 2xdw_A 604 SKQHFEWLIK-------------------YSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSR 664 (710)
T ss_dssp SHHHHHHHHH-------------------HCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTST
T ss_pred CHHHHHHHHH-------------------hCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhcccc
Confidence 1111111100 01112233 5776 999999999999999888888776643
Q ss_pred ----CceEEEecCCCCccccc--ChhcHHHHHHHHhc
Q 024681 233 ----RNTVELLKIEGHLPHLS--APAIVGPVIRRALS 263 (264)
Q Consensus 233 ----~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~ 263 (264)
.+++++++++||.+... +..++.+.+.+||.
T Consensus 665 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 701 (710)
T 2xdw_A 665 KQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIA 701 (710)
T ss_dssp TCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 15899999999987653 34567777888875
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-20 Score=139.89 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=74.9
Q ss_pred CCceEEEecCCCCChhhH-HHhhhhc--CCceEEEecCC------------CC--CCCCCCCCCCcccchHHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAW-QRILPYL--NHHRVIMFDLV------------CA--GSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~-~~~~~~l--~g~~v~~~d~~------------g~--G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
..|+||++||++++...| ..+.+.+ .||.|+++|+| |+ |.|.... ..... .++++.+.+..
T Consensus 53 ~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~~-~~~~~-~~~~~~~~~~~ 130 (304)
T 3d0k_A 53 DRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPR-HVDGW-TYALVARVLAN 130 (304)
T ss_dssp TSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCBC-CGGGS-TTHHHHHHHHH
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCCC-cccch-HHHHHHHHHHH
Confidence 458999999999999888 6667777 79999999999 55 6664321 01111 23443333333
Q ss_pred HHHHh--CCCeEEEEecChhHHHHHHHHHhCCC-ccceeEEecCC
Q 024681 79 ILDTL--GVNRCAYVGHSVSAMIGLLASIRRPD-LFTKLILIGAS 120 (264)
Q Consensus 79 ~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~ 120 (264)
+.+.. +.++++|+|||+||.+++.++.++|+ +++++|+.+++
T Consensus 131 l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 131 IRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp HHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCS
T ss_pred HHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCc
Confidence 33332 35799999999999999999999995 78999988754
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=157.67 Aligned_cols=210 Identities=8% Similarity=-0.002 Sum_probs=129.5
Q ss_pred CCceEEEecCCCCChh--hHHHhhhhc--CCceEEEecCCCCCCCCCCCCC-----CcccchHHHHHHHHHHHHHH--hC
Q 024681 16 GDRILVLAHGFGTDQS--AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFD-----FRRYTTLDAYVDDLLNILDT--LG 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~--~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~ 84 (264)
..|+||++||.++... .|......| +||.|+++|+||+|.+...... .....+++++++.+..+++. .+
T Consensus 508 ~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 587 (751)
T 2xe4_A 508 PQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTT 587 (751)
T ss_dssp CCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCC
T ss_pred CccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCC
Confidence 3589999999776543 465556666 8999999999999986431100 01112366666666666655 23
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH-hhhhhhhhhcccccCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME-ANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 163 (264)
.+++.++|+|+||.+++.++.++|++++++|+..+...... .+. .........+ ......
T Consensus 588 ~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~------------------~~~~~~~~~~~~~~-~~~g~p 648 (751)
T 2xe4_A 588 PSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMT------------------TMCDPSIPLTTGEW-EEWGNP 648 (751)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHH------------------HHTCTTSTTHHHHT-TTTCCT
T ss_pred cccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHh------------------hhcccCcccchhhH-HHcCCC
Confidence 46899999999999999999999999999999988533100 000 0000000000 000000
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccC-EEEEecCCCCCcchhhHHHHHHHcCCC------ceE
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVP-CVIIQTSKDVSVPVSVAEYLQRHLGGR------NTV 236 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~------~~~ 236 (264)
...+.... +...+....+.++++| +|+++|++|..+|+..+.++.+.++.. ..+
T Consensus 649 ~~~~~~~~-------------------~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~ 709 (751)
T 2xe4_A 649 NEYKYYDY-------------------MLSYSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILL 709 (751)
T ss_dssp TSHHHHHH-------------------HHHHCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEE
T ss_pred CCHHHHHH-------------------HHhcChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEE
Confidence 01100000 0011122345567887 999999999999999988888776531 234
Q ss_pred EEecCCCCcccccChh--cHHHHHHHHhc
Q 024681 237 ELLKIEGHLPHLSAPA--IVGPVIRRALS 263 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~--~~~~~i~~fl~ 263 (264)
.+++++||.+..+.++ +....+.+||.
T Consensus 710 ~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~ 738 (751)
T 2xe4_A 710 NIDMESGHFSAKDRYKFWKESAIQQAFVC 738 (751)
T ss_dssp EEETTCCSSCCSSHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCcCChhHHHHHHHHHHHHHH
Confidence 4559999988755443 33445666664
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.7e-22 Score=153.43 Aligned_cols=157 Identities=13% Similarity=0.096 Sum_probs=109.9
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCC------------------c--cc----chH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDF------------------R--RY----TTL 69 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~------------------~--~~----~~~ 69 (264)
..|+||++||++++...|..+++.| +||.|+++|+||+|.|.....+. . .+ ..+
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 176 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQV 176 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHHHH
Confidence 4478999999999999999999999 89999999999999874200000 0 00 012
Q ss_pred HHHHHHHHHHHHHh--------------------------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 70 DAYVDDLLNILDTL--------------------------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 70 ~~~~~~~~~~~~~~--------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
...++|+..+++.+ +.+++.++|||+||.+++.++.+.+ +++++|++++....
T Consensus 177 ~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~~~p 255 (383)
T 3d59_A 177 RQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAWMFP 255 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCTT
T ss_pred HHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCccCC
Confidence 33456666665543 2348999999999999999988776 69999999873110
Q ss_pred CCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCc
Q 024681 124 LNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLV 203 (264)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 203 (264)
. . .+.+.++
T Consensus 256 ~---------------------------------------~--------------------------------~~~~~~i 264 (383)
T 3d59_A 256 L---------------------------------------G--------------------------------DEVYSRI 264 (383)
T ss_dssp C---------------------------------------C--------------------------------GGGGGSC
T ss_pred C---------------------------------------c--------------------------------hhhhccC
Confidence 0 0 0112456
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHc---CCCceEEEecCCCCccc
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHL---GGRNTVELLKIEGHLPH 247 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~ 247 (264)
++|+|+++|++|...+ ..+.+.+.. .. .+++++++++|..+
T Consensus 265 ~~P~Lii~g~~D~~~~--~~~~~~~l~~~~~~-~~~~~~~g~~H~~~ 308 (383)
T 3d59_A 265 PQPLFFINSEYFQYPA--NIIKMKKCYSPDKE-RKMITIRGSVHQNF 308 (383)
T ss_dssp CSCEEEEEETTTCCHH--HHHHHHTTCCTTSC-EEEEEETTCCGGGG
T ss_pred CCCEEEEecccccchh--hHHHHHHHHhcCCc-eEEEEeCCCcCCCc
Confidence 8899999999998543 233333222 23 78999999999864
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-21 Score=159.87 Aligned_cols=209 Identities=12% Similarity=0.105 Sum_probs=124.0
Q ss_pred CCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCCCCCCCCCCCC----CCcccchHHHHHHHHHHHHHHh--CC
Q 024681 16 GDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYF----DFRRYTTLDAYVDDLLNILDTL--GV 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~ 85 (264)
..|+||++||..+.. ..|......| +||.|+++|+||.|....... .......++++.+.+..+++.- +.
T Consensus 453 ~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 532 (693)
T 3iuj_A 453 SNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRT 532 (693)
T ss_dssp CCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCG
T ss_pred CccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCc
Confidence 458999999976543 3455555555 999999999999987642100 0111112445555555554442 33
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
+++.++|||+||.+++.++.++|++++++|+..+.......... . ....|...+. ....
T Consensus 533 ~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~----~-------------~~~~~~~~~g----~p~~ 591 (693)
T 3iuj_A 533 DRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTF----T-------------AGTGWAYDYG----TSAD 591 (693)
T ss_dssp GGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGS----G-------------GGGGCHHHHC----CTTS
T ss_pred ceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccC----C-------------CchhHHHHcC----CccC
Confidence 68999999999999999999999999999999886432211000 0 0000100000 0011
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCC-cccC-EEEEecCCCCCcchhhHHHHHHHcCC------CceEE
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGL-VRVP-CVIIQTSKDVSVPVSVAEYLQRHLGG------RNTVE 237 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~~ 237 (264)
......+.. ..+....+.+ +++| +|+++|++|..+|+..+..+++.++. .++++
T Consensus 592 ~~~~~~~~~------------------~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 653 (693)
T 3iuj_A 592 SEAMFDYLK------------------GYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIR 653 (693)
T ss_dssp CHHHHHHHH------------------HHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEE
T ss_pred HHHHHHHHH------------------hcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEE
Confidence 111000000 1111233455 7887 99999999999999988888777643 25889
Q ss_pred EecCCCCcccc--cChhcHHHHHHHHhc
Q 024681 238 LLKIEGHLPHL--SAPAIVGPVIRRALS 263 (264)
Q Consensus 238 ~~~~~gH~~~~--~~~~~~~~~i~~fl~ 263 (264)
+++++||.+.. ++..+..+.+.+||.
T Consensus 654 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 681 (693)
T 3iuj_A 654 IETNAGHGAGTPVAKLIEQSADIYAFTL 681 (693)
T ss_dssp EEC-------CHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCCcccHHHHHHHHHHHHHHHH
Confidence 99999998764 445666777777774
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-20 Score=136.66 Aligned_cols=103 Identities=15% Similarity=0.242 Sum_probs=81.8
Q ss_pred CCceEEEecCCCCChhhHHH--hhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh------C
Q 024681 16 GDRILVLAHGFGTDQSAWQR--ILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL------G 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~--~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 84 (264)
..|+||++||++++...|.. ....+ .++.|+.+|+++++.+... ......+.+++++..+++.. +
T Consensus 40 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~ 115 (263)
T 2uz0_A 40 DIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQ----YGFDYYTALAEELPQVLKRFFPNMTSK 115 (263)
T ss_dssp CBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCT----TSCBHHHHHHTHHHHHHHHHCTTBCCC
T ss_pred CCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccccCC----CcccHHHHHHHHHHHHHHHHhccccCC
Confidence 34799999999999998887 45555 5888899998888776542 11223677778888888874 2
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
.++++++|||+||.+|+.+|. +|++++++|++++....
T Consensus 116 ~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~ 153 (263)
T 2uz0_A 116 REKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSF 153 (263)
T ss_dssp GGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCS
T ss_pred CCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcch
Confidence 368999999999999999999 99999999999987543
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-20 Score=137.57 Aligned_cols=105 Identities=14% Similarity=0.183 Sum_probs=77.4
Q ss_pred CceEEEecCCCCChhhHHH---hhhhc--CCceEEEecCCCCCCCCCCCCC------------------CcccchHHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQR---ILPYL--NHHRVIMFDLVCAGSVNPDYFD------------------FRRYTTLDAYV 73 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~---~~~~l--~g~~v~~~d~~g~G~s~~~~~~------------------~~~~~~~~~~~ 73 (264)
.|+||++||++++...|.. +...+ .|+.|+++|.+++|.+...... ...+...+...
T Consensus 45 ~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 124 (280)
T 3ls2_A 45 VPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVV 124 (280)
T ss_dssp EEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHH
T ss_pred cCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCCccccccccccccccccHHHHHH
Confidence 4799999999999888865 33444 6999999999877765321100 01112134455
Q ss_pred HHHHHHHHHh-CC-CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 74 DDLLNILDTL-GV-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 74 ~~~~~~~~~~-~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+++...++.. .. ++++++|||+||.+|+.+|.++|+++++++++++..
T Consensus 125 ~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~ 174 (280)
T 3ls2_A 125 NELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIV 174 (280)
T ss_dssp THHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCS
T ss_pred HHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCcc
Confidence 6676666654 22 689999999999999999999999999999999854
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-20 Score=133.75 Aligned_cols=178 Identities=12% Similarity=0.166 Sum_probs=115.7
Q ss_pred CCCceEEEecCCCCChhhHHHhhhhc----CCceEEEecCCCC--------------CCCCCCCCCC---cccchHHHHH
Q 024681 15 TGDRILVLAHGFGTDQSAWQRILPYL----NHHRVIMFDLVCA--------------GSVNPDYFDF---RRYTTLDAYV 73 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~~~~l----~g~~v~~~d~~g~--------------G~s~~~~~~~---~~~~~~~~~~ 73 (264)
+.+++|||+||+|++...|..+++.| .++.+++++-|-. .......... .....+...+
T Consensus 35 ~~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~ 114 (246)
T 4f21_A 35 QARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINSSI 114 (246)
T ss_dssp CCCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHHHH
T ss_pred cCCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHHHH
Confidence 34569999999999999999988887 4778888875421 1111000000 0111234445
Q ss_pred HHHHHHHHHh-----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh
Q 024681 74 DDLLNILDTL-----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN 148 (264)
Q Consensus 74 ~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
+.+..+++.. ..++++++|+|+||.+++.++.++|+++.+++.+++....
T Consensus 115 ~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~------------------------- 169 (246)
T 4f21_A 115 AKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPA------------------------- 169 (246)
T ss_dssp HHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTT-------------------------
T ss_pred HHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCc-------------------------
Confidence 5555554432 3468999999999999999999999999999999874210
Q ss_pred hhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHH
Q 024681 149 YEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR 228 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 228 (264)
...+. . .... ...++|++++||++|+++|.+..++..+
T Consensus 170 ~~~~~--------------------~--------------------~~~~--~~~~~Pvl~~HG~~D~vVp~~~~~~~~~ 207 (246)
T 4f21_A 170 WDNFK--------------------G--------------------KITS--INKGLPILVCHGTDDQVLPEVLGHDLSD 207 (246)
T ss_dssp HHHHS--------------------T--------------------TCCG--GGTTCCEEEEEETTCSSSCHHHHHHHHH
T ss_pred ccccc--------------------c--------------------cccc--cccCCchhhcccCCCCccCHHHHHHHHH
Confidence 00000 0 0000 0125799999999999999998888887
Q ss_pred HcCCC---ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 229 HLGGR---NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 229 ~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+... +++..+++.||.+..+ + .+.+.+||+
T Consensus 208 ~L~~~g~~v~~~~y~g~gH~i~~~---~-l~~~~~fL~ 241 (246)
T 4f21_A 208 KLKVSGFANEYKHYVGMQHSVCME---E-IKDISNFIA 241 (246)
T ss_dssp HHHTTTCCEEEEEESSCCSSCCHH---H-HHHHHHHHH
T ss_pred HHHHCCCCeEEEEECCCCCccCHH---H-HHHHHHHHH
Confidence 77532 7888999999977533 3 344556654
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-20 Score=141.22 Aligned_cols=213 Identities=13% Similarity=0.004 Sum_probs=119.5
Q ss_pred CCceEEEecCCCC---Ch--hhHHHhhhhc--C-CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-----
Q 024681 16 GDRILVLAHGFGT---DQ--SAWQRILPYL--N-HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT----- 82 (264)
Q Consensus 16 ~~p~vv~~hG~~~---~~--~~~~~~~~~l--~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----- 82 (264)
..|+||++||.+. +. ..|..++..| + ||.|+++|+|+.+....+ . .+++..+.+..+.+.
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~~----~---~~~D~~~a~~~l~~~~~~~~ 183 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYP----C---AYDDGWTALKWVMSQPFMRS 183 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT----H---HHHHHHHHHHHHHHCTTTEE
T ss_pred cceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCCc----H---HHHHHHHHHHHHHhCchhhh
Confidence 3489999999753 22 3477888888 4 999999999986544221 0 233443333333322
Q ss_pred -hCCC-eEEEEecChhHHHHHHHHHhCCC---ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 83 -LGVN-RCAYVGHSVSAMIGLLASIRRPD---LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 83 -~~~~-~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
.+.+ +++|+|+|+||.+|+.+|.+.++ +++++|+++|........ ..... .. .
T Consensus 184 ~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~--------~~~~~----~~----------~ 241 (365)
T 3ebl_A 184 GGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERT--------ESERR----LD----------G 241 (365)
T ss_dssp TTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCC--------HHHHH----HT----------T
T ss_pred CCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCC--------hhhhh----cC----------C
Confidence 2334 89999999999999999987665 799999999864322110 00000 00 0
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcc-cCEEEEecCCCCCcchh--hHHHHHHHcCCCc
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVR-VPCVIIQTSKDVSVPVS--VAEYLQRHLGGRN 234 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~ 234 (264)
.. .........+................... ......+..+. .|+|+++|+.|.+++.. ..+.+.+.-.. +
T Consensus 242 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~~g~~-v 315 (365)
T 3ebl_A 242 KY---FVTLQDRDWYWKAYLPEDADRDHPACNPF--GPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHH-V 315 (365)
T ss_dssp TS---SCCHHHHHHHHHHHSCTTCCTTSTTTCTT--STTCCCCTTSCCCCEEEEEETTSTTHHHHHHHHHHHHHTTCC-E
T ss_pred Cc---ccCHHHHHHHHHHhCCCCCCCCCcccCCC--CCcchhhccCCCCCEEEEEcCcccchhHHHHHHHHHHHCCCC-E
Confidence 00 00011111111111110000000000000 00111222222 48999999999877542 23333333333 7
Q ss_pred eEEEecCCCCccc----ccChhcHHHHHHHHhc
Q 024681 235 TVELLKIEGHLPH----LSAPAIVGPVIRRALS 263 (264)
Q Consensus 235 ~~~~~~~~gH~~~----~~~~~~~~~~i~~fl~ 263 (264)
+++++++++|.++ .++.+++.+.+.+||+
T Consensus 316 ~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~ 348 (365)
T 3ebl_A 316 KVVQCENATVGFYLLPNTVHYHEVMEEISDFLN 348 (365)
T ss_dssp EEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcEEEeccCCCHHHHHHHHHHHHHHH
Confidence 9999999999765 3556788999999986
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.85 E-value=5e-20 Score=151.20 Aligned_cols=222 Identities=15% Similarity=0.152 Sum_probs=132.2
Q ss_pred CCcceeeEEEEeC----CCCceEEEecCCCCChh--hHHHhh-hhc--CCceEEEecCCCCCCCCCCC----CCCcccch
Q 024681 2 GDLLEALHVRVVG----TGDRILVLAHGFGTDQS--AWQRIL-PYL--NHHRVIMFDLVCAGSVNPDY----FDFRRYTT 68 (264)
Q Consensus 2 g~~~~~~~~~~~g----~~~p~vv~~hG~~~~~~--~~~~~~-~~l--~g~~v~~~d~~g~G~s~~~~----~~~~~~~~ 68 (264)
|..+....|...+ ...|+||++||.++... .|.... +.| +||.|+.+|+||+|.+.... ........
T Consensus 459 G~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~ 538 (711)
T 4hvt_A 459 GVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTA 538 (711)
T ss_dssp SCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHH
T ss_pred CeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCc
Confidence 3334444444443 24589999999765443 233333 344 99999999999998764210 00111112
Q ss_pred HHHHHHHHHHHHHHh--CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH
Q 024681 69 LDAYVDDLLNILDTL--GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME 146 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
++++.+.+..+++.- +.+++.++|+|+||.+++.++.++|++++++|+..+...........
T Consensus 539 ~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~---------------- 602 (711)
T 4hvt_A 539 FNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFG---------------- 602 (711)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST----------------
T ss_pred HHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccc----------------
Confidence 444444444444432 23589999999999999999999999999999998864432110000
Q ss_pred hhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCccc--CEEEEecCCCCCcchhhHH
Q 024681 147 ANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRV--PCVIIQTSKDVSVPVSVAE 224 (264)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--P~l~i~g~~D~~~~~~~~~ 224 (264)
....|...+. ....++....+ . ..+....+.++++ |+|+++|++|..+|+..+.
T Consensus 603 -~~~~~~~~~G----~p~~~~~~~~l-~------------------~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~ 658 (711)
T 4hvt_A 603 -AGHSWVTEYG----DPEIPNDLLHI-K------------------KYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGR 658 (711)
T ss_dssp -TGGGGHHHHC----CTTSHHHHHHH-H------------------HHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHH
T ss_pred -cchHHHHHhC----CCcCHHHHHHH-H------------------HcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHH
Confidence 0001111000 00111111000 0 1122233556666 9999999999999999999
Q ss_pred HHHHHc-CC---CceEEEecCCCCccccc--ChhcHHHHHHHHhc
Q 024681 225 YLQRHL-GG---RNTVELLKIEGHLPHLS--APAIVGPVIRRALS 263 (264)
Q Consensus 225 ~~~~~~-~~---~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~ 263 (264)
++.+.+ .. .+++++++++||.+... +..+....+.+||.
T Consensus 659 ~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~ 703 (711)
T 4hvt_A 659 IFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFA 703 (711)
T ss_dssp HHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHH
Confidence 998888 32 27899999999986542 22344455666664
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.8e-20 Score=141.05 Aligned_cols=170 Identities=18% Similarity=0.163 Sum_probs=116.5
Q ss_pred ceEEEecCCCCChhhH--H--------Hhhh---hc-CCceEEEecCCCCCCCCCCCC----CCcccchHHHHHHHHHHH
Q 024681 18 RILVLAHGFGTDQSAW--Q--------RILP---YL-NHHRVIMFDLVCAGSVNPDYF----DFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~--~--------~~~~---~l-~g~~v~~~d~~g~G~s~~~~~----~~~~~~~~~~~~~~~~~~ 79 (264)
|+||++||.+.+...+ . .+.. .. .++.|+++|.+|.+....... ........++..+.+..+
T Consensus 175 Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~ 254 (380)
T 3doh_A 175 PLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKL 254 (380)
T ss_dssp EEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcccccccccccccCCcchHHHHHHHHHHH
Confidence 7999999988654321 1 1111 11 578999999997654422100 001112366777777777
Q ss_pred HHHhCCC--eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 80 LDTLGVN--RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 80 ~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
++..+.+ +++|+|||+||.+++.++.++|+++++++++++...
T Consensus 255 ~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~----------------------------------- 299 (380)
T 3doh_A 255 LDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD----------------------------------- 299 (380)
T ss_dssp HHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC-----------------------------------
T ss_pred HHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCC-----------------------------------
Confidence 7777654 799999999999999999999999999999998520
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCc-ccCEEEEecCCCCCcchhhHHHHHHHcCC---C
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLV-RVPCVIIQTSKDVSVPVSVAEYLQRHLGG---R 233 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~ 233 (264)
...+.++ .+|+++++|+.|..+|.+.++.+.+.+.. .
T Consensus 300 ---------------------------------------~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~ 340 (380)
T 3doh_A 300 ---------------------------------------VSKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGK 340 (380)
T ss_dssp ---------------------------------------GGGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCC
T ss_pred ---------------------------------------hhhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCc
Confidence 0011222 37999999999999999888888877642 2
Q ss_pred ceEEEecCC--------CCcccccChhcHHHHHHHHhc
Q 024681 234 NTVELLKIE--------GHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 234 ~~~~~~~~~--------gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++.+++++ +|....+... .+.+.+||.
T Consensus 341 ~~~~~~~~~~h~~h~~~~H~~~~~~~~--~~~i~~wL~ 376 (380)
T 3doh_A 341 VRYTEYEKGFMEKHGWDPHGSWIPTYE--NQEAIEWLF 376 (380)
T ss_dssp EEEEEECTTHHHHTTCCTTCTHHHHHT--CHHHHHHHH
T ss_pred eEEEEecCCcccCCCCCCchhHHHhcC--CHHHHHHHH
Confidence 789999998 6753222111 126667764
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7.6e-21 Score=147.24 Aligned_cols=105 Identities=18% Similarity=0.170 Sum_probs=86.3
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCc---eEEEecCCCCCCC-----CCCCC--------------C---------
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHH---RVIMFDLVCAGSV-----NPDYF--------------D--------- 62 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~---~v~~~d~~g~G~s-----~~~~~--------------~--------- 62 (264)
.+++|||+||++++...|..+++.| +|| +|+++|+||+|.| +.... +
T Consensus 21 ~~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v~~ 100 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKILS 100 (484)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccccc
Confidence 4579999999999999999999999 789 7999999999976 11000 0
Q ss_pred ----CcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC---CccceeEEecCC
Q 024681 63 ----FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP---DLFTKLILIGAS 120 (264)
Q Consensus 63 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~ 120 (264)
.....+.+++++++.++++.++.++++++||||||.+++.++.++| ++|+++|+++++
T Consensus 101 ~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp 165 (484)
T 2zyr_A 101 KSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGV 165 (484)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCC
T ss_pred ccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCc
Confidence 0011236677788888888889899999999999999999999998 489999999985
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-19 Score=132.83 Aligned_cols=106 Identities=13% Similarity=0.211 Sum_probs=76.2
Q ss_pred CCceEEEecCCCCChhhHHH---hhhhc--CCceEEEecCCCCCCCCCCC--------------CC----CcccchHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQR---ILPYL--NHHRVIMFDLVCAGSVNPDY--------------FD----FRRYTTLDAY 72 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~---~~~~l--~g~~v~~~d~~g~G~s~~~~--------------~~----~~~~~~~~~~ 72 (264)
..|+||++||++++...|.. +...+ .++.|+++|.+++|.+.... .. ...+......
T Consensus 50 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~ 129 (283)
T 4b6g_A 50 PLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYI 129 (283)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcccccCccCcccchhhHHHHH
Confidence 34799999999999888754 33444 79999999987444321110 00 0111213444
Q ss_pred HHHHHHHHHHh--CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 73 VDDLLNILDTL--GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 73 ~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
++++..+++.. ..++++++||||||.+|+.+|.++|+++++++++++..
T Consensus 130 ~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~ 180 (283)
T 4b6g_A 130 LNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPIL 180 (283)
T ss_dssp HTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCC
T ss_pred HHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCcc
Confidence 66777777766 23689999999999999999999999999999999854
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-20 Score=147.11 Aligned_cols=104 Identities=13% Similarity=0.204 Sum_probs=86.7
Q ss_pred CCCceEEEecCCCCCh-hhHHH-hhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----C-
Q 024681 15 TGDRILVLAHGFGTDQ-SAWQR-ILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----G- 84 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~-~~~~~-~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 84 (264)
+.+|+||++||++++. ..|.. +.+.| .+|+|+++|+||+|.|... .... +.+.+++|+.++++.+ +
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~---~~~~-~~~~~~~dl~~~i~~l~~~~g~ 143 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYS---QASQ-NIRVVGAEVAYLVQVLSTSLNY 143 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHH---HHHH-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccch---hhHh-hHHHHHHHHHHHHHHHHHhcCC
Confidence 3468999999999998 68877 77877 4999999999999998632 1222 4777888888888877 4
Q ss_pred -CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 85 -VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 85 -~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
.++++|+||||||.+|+.+|.++|+++++++++++...
T Consensus 144 ~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 144 APENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred CcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 57999999999999999999999999999999998643
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=135.82 Aligned_cols=102 Identities=20% Similarity=0.271 Sum_probs=91.3
Q ss_pred CCCCceEEEecCCCCCh------hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 14 GTGDRILVLAHGFGTDQ------SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~------~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
.+.+|+|||+||++++. ..|..+.+.| +||+|+++|+||+|.|... .. +.+++++++.++++.++.
T Consensus 5 ~~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~-----~~-~~~~l~~~i~~~l~~~~~ 78 (320)
T 1ys1_X 5 AATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP-----NG-RGEQLLAYVKTVLAATGA 78 (320)
T ss_dssp TCCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST-----TS-HHHHHHHHHHHHHHHHCC
T ss_pred CCCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC-----CC-CHHHHHHHHHHHHHHhCC
Confidence 34568999999999888 7899999999 8999999999999998643 12 589999999999999998
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
++++++||||||.++..++.++|++|+++|+++++.
T Consensus 79 ~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 79 TKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 999999999999999999999999999999999853
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=133.58 Aligned_cols=100 Identities=10% Similarity=0.087 Sum_probs=84.2
Q ss_pred CCceEEEecCCCCCh-hhHH-Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 16 GDRILVLAHGFGTDQ-SAWQ-RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~-~~~~-~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
.+++|||+||++++. ..|. .+.+.| +||+|+++|+||||.++. .. +.+++.+.+..+++..+.++++|+
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~------~~-~~~~la~~I~~l~~~~g~~~v~LV 136 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDT------QV-NTEYMVNAITTLYAGSGNNKLPVL 136 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCH------HH-HHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcH------HH-HHHHHHHHHHHHHHHhCCCceEEE
Confidence 346999999999998 7898 899999 799999999999997642 11 366777778888888888999999
Q ss_pred ecChhHHHHHHHHHhC---CCccceeEEecCCCC
Q 024681 92 GHSVSAMIGLLASIRR---PDLFTKLILIGASPR 122 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~ 122 (264)
||||||.++..++..+ +++|+++|+++++..
T Consensus 137 GHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 137 TWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp EETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred EECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 9999999998777765 589999999998643
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-18 Score=127.24 Aligned_cols=101 Identities=20% Similarity=0.284 Sum_probs=74.0
Q ss_pred CCceEEEecCCCCChhhHHHh-------hhhc--C----CceEEEecCCCCCCCCCCCCCCcccch-HHHHHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRI-------LPYL--N----HHRVIMFDLVCAGSVNPDYFDFRRYTT-LDAYVDDLLNILD 81 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~-------~~~l--~----g~~v~~~d~~g~G~s~~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (264)
..|+||++||.+++...|... ++.| . +|.|+++|.++++.+.. ..+.. .++.++++...++
T Consensus 61 ~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~ 135 (268)
T 1jjf_A 61 KYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIA-----DGYENFTKDLLNSLIPYIE 135 (268)
T ss_dssp CBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCS-----CHHHHHHHHHHHTHHHHHH
T ss_pred CccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCcccc-----ccHHHHHHHHHHHHHHHHH
Confidence 347999999999887666443 5555 4 59999999999876432 12211 2233555555554
Q ss_pred H-hCC----CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 82 T-LGV----NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 82 ~-~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
. .+. ++++++|||+||.+++.++.++|+++++++++++..
T Consensus 136 ~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 136 SNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 180 (268)
T ss_dssp HHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred hhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCC
Confidence 3 332 689999999999999999999999999999999854
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-17 Score=128.00 Aligned_cols=105 Identities=10% Similarity=0.021 Sum_probs=69.2
Q ss_pred CceEEEecCCCCChhh---------HHHhhh-hc-CCceEEEecCCCCCCCCCCCCCCcc----cchHHHHHHHHHHHHH
Q 024681 17 DRILVLAHGFGTDQSA---------WQRILP-YL-NHHRVIMFDLVCAGSVNPDYFDFRR----YTTLDAYVDDLLNILD 81 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~---------~~~~~~-~l-~g~~v~~~d~~g~G~s~~~~~~~~~----~~~~~~~~~~~~~~~~ 81 (264)
.|+|++.||......+ +..... .| +||+|+++|+||+|.|......... ..++.+.++++..+++
T Consensus 74 ~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~ 153 (377)
T 4ezi_A 74 VGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELAN 153 (377)
T ss_dssp EEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhh
Confidence 4799999998753221 222222 24 8999999999999999742111100 1123344444445555
Q ss_pred HhCC---CeEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCCC
Q 024681 82 TLGV---NRCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGASP 121 (264)
Q Consensus 82 ~~~~---~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~ 121 (264)
.+++ ++++++|||+||.+++.+|...|+ .+.+++..+++.
T Consensus 154 ~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~ 201 (377)
T 4ezi_A 154 RLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPY 201 (377)
T ss_dssp HTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCC
T ss_pred ccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCccc
Confidence 5554 689999999999999999887654 477777777754
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=135.65 Aligned_cols=114 Identities=11% Similarity=-0.048 Sum_probs=82.8
Q ss_pred ceeeEEEEeCC-CCceEEEecCCCCChhhHHH---hh-hhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHH
Q 024681 5 LEALHVRVVGT-GDRILVLAHGFGTDQSAWQR---IL-PYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL 77 (264)
Q Consensus 5 ~~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~---~~-~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~ 77 (264)
+....|...+. ..|+||+.||++.....+.. .. ..| +||.|+++|+||+|.|..... . +....+|+.
T Consensus 22 L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~---~---~~~~~~D~~ 95 (587)
T 3i2k_A 22 LAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFV---P---HVDDEADAE 95 (587)
T ss_dssp EEEEEEEECCSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCC---T---TTTHHHHHH
T ss_pred EEEEEEECCCCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCccc---c---ccchhHHHH
Confidence 33333444443 34788999998877543332 33 666 999999999999999975421 1 223566666
Q ss_pred HHHHHhC-----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC-CCCC
Q 024681 78 NILDTLG-----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS-PRFL 124 (264)
Q Consensus 78 ~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~-~~~~ 124 (264)
++++++. ..++.++|+||||.+++.+|.+.|+.++++|++++. ....
T Consensus 96 ~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~ 148 (587)
T 3i2k_A 96 DTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYR 148 (587)
T ss_dssp HHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCC
T ss_pred HHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccc
Confidence 6666652 258999999999999999999999999999999986 5444
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-19 Score=140.82 Aligned_cols=103 Identities=13% Similarity=0.177 Sum_probs=87.3
Q ss_pred CCceEEEecCCCCCh-hhHHH-hhhhc-C--CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----C--
Q 024681 16 GDRILVLAHGFGTDQ-SAWQR-ILPYL-N--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----G-- 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~-~~~~~-~~~~l-~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-- 84 (264)
.+|+||++||++++. ..|.. +++.| + +|+|+++|+||+|.|... ...+ +++.+++|+.++++.+ +
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~---~~~~-~~~~~~~dl~~~i~~L~~~~g~~ 144 (452)
T 1w52_X 69 SRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYT---QAVQ-NIRIVGAETAYLIQQLLTELSYN 144 (452)
T ss_dssp TSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHH---HHHH-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccH---HHHH-hHHHHHHHHHHHHHHHHHhcCCC
Confidence 458999999999988 67877 77777 4 999999999999998632 1222 4778888999988887 5
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
.++++|+||||||.+|..+|.++|++|+++++++|+..
T Consensus 145 ~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 145 PENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred cccEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 67999999999999999999999999999999998643
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-19 Score=133.02 Aligned_cols=99 Identities=20% Similarity=0.263 Sum_probs=88.7
Q ss_pred CCCceEEEecCCCCChh-----hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCe
Q 024681 15 TGDRILVLAHGFGTDQS-----AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNR 87 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~-----~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (264)
+.+|+|||+||++++.. .|..+.+.| .||+|+++|+||+|.|.. +.+++++++.++++.++.++
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~~---------~~~~~~~~i~~~~~~~~~~~ 75 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEV---------RGEQLLQQVEEIVALSGQPK 75 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHH---------HHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCchh---------hHHHHHHHHHHHHHHhCCCC
Confidence 45689999999988754 889999999 889999999999998742 48999999999999999899
Q ss_pred EEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
++++||||||.++..++.++|++|+++|+++++..
T Consensus 76 v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~ 110 (285)
T 1ex9_A 76 VNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp EEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEEEEECHhHHHHHHHHHhChhheeEEEEECCCCC
Confidence 99999999999999999999999999999998543
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.79 E-value=8.3e-19 Score=114.89 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=77.5
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
+++|...|++ |+||++| ++...|..+ | ++|+|+++|+||+|.|..... . ++++++++.++++.++.
T Consensus 13 ~~~~~~~g~~-~~vv~~H---~~~~~~~~~---l~~~~~v~~~d~~G~G~s~~~~~---~---~~~~~~~~~~~~~~~~~ 79 (131)
T 2dst_A 13 NLVFDRVGKG-PPVLLVA---EEASRWPEA---LPEGYAFYLLDLPGYGRTEGPRM---A---PEELAHFVAGFAVMMNL 79 (131)
T ss_dssp EEEEEEECCS-SEEEEES---SSGGGCCSC---CCTTSEEEEECCTTSTTCCCCCC---C---HHHHHHHHHHHHHHTTC
T ss_pred EEEEEEcCCC-CeEEEEc---CCHHHHHHH---HhCCcEEEEECCCCCCCCCCCCC---C---HHHHHHHHHHHHHHcCC
Confidence 5788888864 6899999 566677766 8 789999999999999976421 1 88899999999999999
Q ss_pred CeEEEEecChhHHHHHHHHHhCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPD 109 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~ 109 (264)
++++++||||||.+++.+|.++|.
T Consensus 80 ~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 80 GAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CccEEEEEChHHHHHHHHHhcCCc
Confidence 999999999999999999999884
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-19 Score=140.29 Aligned_cols=103 Identities=15% Similarity=0.206 Sum_probs=87.3
Q ss_pred CCceEEEecCCCCCh-hhHHH-hhhhc-C--CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CC-
Q 024681 16 GDRILVLAHGFGTDQ-SAWQR-ILPYL-N--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GV- 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~-~~~~~-~~~~l-~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~- 85 (264)
.+|+||++||++++. ..|.. +.+.| + +|+|+++|+||+|.|... ...+ +...+++|+.++++.+ +.
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~---~~~~-~~~~~~~dl~~li~~L~~~~g~~ 144 (452)
T 1bu8_A 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYT---QASY-NTRVVGAEIAFLVQVLSTEMGYS 144 (452)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHH---HHHH-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchh---HhHh-hHHHHHHHHHHHHHHHHHhcCCC
Confidence 458999999999998 78887 66777 3 999999999999998632 1222 4778889999999888 54
Q ss_pred -CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 86 -NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 86 -~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
++++|+||||||.+|+.+|.++|++|+++++++|+..
T Consensus 145 ~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 145 PENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred ccceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 7999999999999999999999999999999998643
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.8e-19 Score=133.71 Aligned_cols=106 Identities=12% Similarity=0.112 Sum_probs=88.1
Q ss_pred CCceEEEecCCCCC----------hhhH----HHhhhhc--CCce---EEEecCCCCCCCCCCC-CCCcccchHHHHHHH
Q 024681 16 GDRILVLAHGFGTD----------QSAW----QRILPYL--NHHR---VIMFDLVCAGSVNPDY-FDFRRYTTLDAYVDD 75 (264)
Q Consensus 16 ~~p~vv~~hG~~~~----------~~~~----~~~~~~l--~g~~---v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~ 75 (264)
.+++|||+||++++ ...| ..+++.| +||. |+++|+||+|.|.... .....+ ..+++.++
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~-~~~~l~~~ 117 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSST-KYAIIKTF 117 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHH-HHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHH-HHHHHHHH
Confidence 34689999999994 4678 8888888 7998 9999999999885431 111223 37888888
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhC--CCccceeEEecCCCC
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRR--PDLFTKLILIGASPR 122 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 122 (264)
+.++++..+.++++|+||||||.+++.++.++ |++|+++|+++++..
T Consensus 118 I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 118 IDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 89999999989999999999999999999998 899999999998643
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.77 E-value=6.2e-19 Score=137.24 Aligned_cols=104 Identities=13% Similarity=0.200 Sum_probs=84.8
Q ss_pred CCCceEEEecCCCCCh-hhHHH-hhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh------
Q 024681 15 TGDRILVLAHGFGTDQ-SAWQR-ILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL------ 83 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~-~~~~~-~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 83 (264)
.++|+||++||++++. ..|.. +++.| .+|+|+++|+||+|.|... ...+ +.+.+++++.++++.+
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~---~~~~-~~~~v~~~la~ll~~L~~~~g~ 142 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYS---QASQ-NVRIVGAEVAYLVGVLQSSFDY 142 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHH---HHHH-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccH---HHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence 3468999999999885 57876 66665 6899999999999988521 1123 3677788888888766
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+.++++|+||||||.+|..+|.++|++|.++++++|+..
T Consensus 143 ~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 143 SPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred CcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 467999999999999999999999999999999998654
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-18 Score=134.77 Aligned_cols=104 Identities=15% Similarity=0.223 Sum_probs=84.2
Q ss_pred CCCceEEEecCCCCChh-hHHH-hhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh------
Q 024681 15 TGDRILVLAHGFGTDQS-AWQR-ILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL------ 83 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~-~~~~-~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 83 (264)
.++|+||++||++++.. .|.. +.+.| .+|+|+++|+||+|.|... ...+ +.+..++++.++++.+
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~---~~~~-~~~~~a~~l~~ll~~L~~~~g~ 143 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYT---QAAN-NVRVVGAQVAQMLSMLSANYSY 143 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHH---HHHH-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcch---HHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence 34689999999998875 7866 55555 3899999999999987421 1223 3778888998888876
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
+.++++|+||||||.+|..+|.++|+ |.++++++|+...
T Consensus 144 ~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p~ 182 (450)
T 1rp1_A 144 SPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEAS 182 (450)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCTT
T ss_pred ChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccccc
Confidence 46799999999999999999999999 9999999987543
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.74 E-value=9.6e-17 Score=120.27 Aligned_cols=107 Identities=20% Similarity=0.172 Sum_probs=77.5
Q ss_pred CCCceEEEecCC--CCChhhHHHh---hhhc--CCceEEEecCCCC-CCCCCCCCCC-----cccchHHHH-HHHHHHHH
Q 024681 15 TGDRILVLAHGF--GTDQSAWQRI---LPYL--NHHRVIMFDLVCA-GSVNPDYFDF-----RRYTTLDAY-VDDLLNIL 80 (264)
Q Consensus 15 ~~~p~vv~~hG~--~~~~~~~~~~---~~~l--~g~~v~~~d~~g~-G~s~~~~~~~-----~~~~~~~~~-~~~~~~~~ 80 (264)
+..|+||++||. +++...|... .+.+ .++.|+++|.++. +.++...... ..+. ++++ ++++..++
T Consensus 32 ~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~l~~~i 110 (304)
T 1sfr_A 32 ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYK-WETFLTSELPGWL 110 (304)
T ss_dssp TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCB-HHHHHHTHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCcccccccccccc-HHHHHHHHHHHHH
Confidence 456899999999 5677777764 3445 6899999998764 2222111000 1222 5554 47888888
Q ss_pred HH-hCCC--eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 81 DT-LGVN--RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 81 ~~-~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+. ++++ +++|+|+||||.+|+.++.++|+++++++++++...
T Consensus 111 ~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 155 (304)
T 1sfr_A 111 QANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (304)
T ss_dssp HHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred HHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 76 5554 899999999999999999999999999999998643
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.7e-18 Score=131.65 Aligned_cols=116 Identities=10% Similarity=0.027 Sum_probs=80.1
Q ss_pred cceeeEEEEeC-C-CCceEEEecCCCCChhhH--------------H----Hhhhhc--CCceEEEecCCCCCCCCCCCC
Q 024681 4 LLEALHVRVVG-T-GDRILVLAHGFGTDQSAW--------------Q----RILPYL--NHHRVIMFDLVCAGSVNPDYF 61 (264)
Q Consensus 4 ~~~~~~~~~~g-~-~~p~vv~~hG~~~~~~~~--------------~----~~~~~l--~g~~v~~~d~~g~G~s~~~~~ 61 (264)
.+....|...+ + ..|+||++||.+++...+ + .++..| +||.|+++|+||+|.|.....
T Consensus 99 ~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~s~~~~~ 178 (391)
T 3g8y_A 99 VSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLEC 178 (391)
T ss_dssp CEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGGGCSSGG
T ss_pred EEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccccCCccc
Confidence 34444444444 2 348999999999887533 2 566777 899999999999999965311
Q ss_pred CC--cccchHHHH---------------HHHHHHHHHHhC------CCeEEEEecChhHHHHHHHHHhCCCccceeEEec
Q 024681 62 DF--RRYTTLDAY---------------VDDLLNILDTLG------VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIG 118 (264)
Q Consensus 62 ~~--~~~~~~~~~---------------~~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~ 118 (264)
.. ..+. ...+ +.|+.++++.+. .+++.++||||||.+++.+|... ++++++|+.+
T Consensus 179 ~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~i~a~v~~~ 256 (391)
T 3g8y_A 179 YDKGWNYD-YDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KDIYAFVYND 256 (391)
T ss_dssp GTTTTSCC-HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCEEEEES
T ss_pred ccccccch-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-CceeEEEEcc
Confidence 10 0011 2222 366666776652 24799999999999999988765 5799999888
Q ss_pred CCC
Q 024681 119 ASP 121 (264)
Q Consensus 119 ~~~ 121 (264)
+..
T Consensus 257 ~~~ 259 (391)
T 3g8y_A 257 FLC 259 (391)
T ss_dssp CBC
T ss_pred CCC
Confidence 643
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=129.42 Aligned_cols=107 Identities=12% Similarity=0.123 Sum_probs=82.3
Q ss_pred CCCCceEEEecCCCCChhhHH---Hhhhhc---CCceEEEecCCCCCCCCCCCC------CCcccchHHHHHHHHHHHHH
Q 024681 14 GTGDRILVLAHGFGTDQSAWQ---RILPYL---NHHRVIMFDLVCAGSVNPDYF------DFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~~~~~---~~~~~l---~g~~v~~~d~~g~G~s~~~~~------~~~~~~~~~~~~~~~~~~~~ 81 (264)
+++. |||++||..++...+. .+...| -++.|+++|+||||+|.+... +.-.|.+.++.++|+..+++
T Consensus 36 ~~g~-Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~ 114 (446)
T 3n2z_B 36 KNGG-SILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIK 114 (446)
T ss_dssp TTTC-EEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHH
T ss_pred CCCC-CEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHH
Confidence 3444 6888899888765432 233344 367999999999999975321 12234468999999999998
Q ss_pred HhCC-------CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 82 TLGV-------NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 82 ~~~~-------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.++. .+++++||||||.+|+.++.++|+.|.++|+.+++.
T Consensus 115 ~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 115 HLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp HHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccch
Confidence 8753 389999999999999999999999999999987653
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.3e-17 Score=121.30 Aligned_cols=96 Identities=13% Similarity=0.167 Sum_probs=79.2
Q ss_pred CCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHS 94 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S 94 (264)
.+++++|+||++++...|..+.+.|. +.|+++|+|+ . + ... +++++++++.+.++.+.. ++++++|||
T Consensus 45 ~~~~l~~~hg~~g~~~~~~~~~~~l~-~~v~~~~~~~--~--~-----~~~-~~~~~a~~~~~~i~~~~~~~~~~l~G~S 113 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVFHSLASRLS-IPTYGLQCTR--A--A-----PLD-SIHSLAAYYIDCIRQVQPEGPYRVAGYS 113 (316)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS-SCEEEECCCT--T--S-----CTT-CHHHHHHHHHHHHTTTCSSCCCEEEEET
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC-CCEEEEECCC--C--C-----CcC-CHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 45789999999999999999988886 9999999982 1 1 112 599999999999988864 789999999
Q ss_pred hhHHHHHHHHHhCC---Cc---cceeEEecCCCC
Q 024681 95 VSAMIGLLASIRRP---DL---FTKLILIGASPR 122 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p---~~---v~~~vl~~~~~~ 122 (264)
|||.+|+.+|.+.+ +. +++++++++.+.
T Consensus 114 ~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~~ 147 (316)
T 2px6_A 114 YGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT 147 (316)
T ss_dssp HHHHHHHHHHHHHHHHC---CCCCEEEEESCSSC
T ss_pred HHHHHHHHHHHHHHHcCCcccccceEEEEcCCch
Confidence 99999999998764 45 899999998643
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.74 E-value=7.2e-17 Score=131.68 Aligned_cols=121 Identities=12% Similarity=0.084 Sum_probs=80.0
Q ss_pred CCcceeeEEEEeCC-CCceEEEecCCCCCh-------hhHHH-hh---hhc--CCceEEEecCCCCCCCCCCCCCCc---
Q 024681 2 GDLLEALHVRVVGT-GDRILVLAHGFGTDQ-------SAWQR-IL---PYL--NHHRVIMFDLVCAGSVNPDYFDFR--- 64 (264)
Q Consensus 2 g~~~~~~~~~~~g~-~~p~vv~~hG~~~~~-------~~~~~-~~---~~l--~g~~v~~~d~~g~G~s~~~~~~~~--- 64 (264)
|..+....|...+. ..|+||++||++.+. ..|.. +. +.| +||.|+++|+||+|.|........
T Consensus 35 G~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~~~~~~~~~ 114 (615)
T 1mpx_A 35 GVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLR 114 (615)
T ss_dssp SCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCS
T ss_pred CCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCccccccccc
Confidence 33333334444443 347888899988753 13332 32 566 899999999999999965321110
Q ss_pred -ccchH-HHHHHHHHHHHHHhC----C--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 65 -RYTTL-DAYVDDLLNILDTLG----V--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 65 -~~~~~-~~~~~~~~~~~~~~~----~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
.|... ...++|+.++++++. . .++.++|||+||.+++.+|..+|++++++|.+++...
T Consensus 115 ~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 115 GPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp BTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred cccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 01100 023455555554442 1 3899999999999999999989999999999998765
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-16 Score=117.18 Aligned_cols=105 Identities=18% Similarity=0.124 Sum_probs=77.2
Q ss_pred CceEEEecCCC--CChhhHHHhh---hhc--CCceEEEecCCCC-CCCCCCCCCC-----cccchHHHH-HHHHHHHHHH
Q 024681 17 DRILVLAHGFG--TDQSAWQRIL---PYL--NHHRVIMFDLVCA-GSVNPDYFDF-----RRYTTLDAY-VDDLLNILDT 82 (264)
Q Consensus 17 ~p~vv~~hG~~--~~~~~~~~~~---~~l--~g~~v~~~d~~g~-G~s~~~~~~~-----~~~~~~~~~-~~~~~~~~~~ 82 (264)
.++||++||++ .+...|.... +.+ .++.|+++|.+|. +.++...... ..+. ++++ ++++..++++
T Consensus 29 ~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~l~~~i~~ 107 (280)
T 1dqz_A 29 PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYK-WETFLTREMPAWLQA 107 (280)
T ss_dssp SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCB-HHHHHHTHHHHHHHH
T ss_pred CCEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCcccccccccc-HHHHHHHHHHHHHHH
Confidence 36999999995 4777787654 345 6899999998754 2222110000 1233 5554 5888888887
Q ss_pred -hCCC--eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 83 -LGVN--RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 83 -~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
++++ +++|+||||||.+|+.+|.++|+++++++++++...
T Consensus 108 ~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 150 (280)
T 1dqz_A 108 NKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp HHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred HcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccc
Confidence 6664 899999999999999999999999999999998643
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.4e-16 Score=116.69 Aligned_cols=103 Identities=17% Similarity=0.108 Sum_probs=75.6
Q ss_pred CceEEEecCCC--CChhhHHH---hhhhc--CCceEEEecCCCCC-CCCCCCCCCcccchHHHHHHHHHHHHHH-hCCC-
Q 024681 17 DRILVLAHGFG--TDQSAWQR---ILPYL--NHHRVIMFDLVCAG-SVNPDYFDFRRYTTLDAYVDDLLNILDT-LGVN- 86 (264)
Q Consensus 17 ~p~vv~~hG~~--~~~~~~~~---~~~~l--~g~~v~~~d~~g~G-~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 86 (264)
+|+||++||++ .+...|.. +.+.+ .++.|+++|.++.+ .++........+ ...+++++..+++. ++++
T Consensus 34 ~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~i~~~~~~~~ 111 (280)
T 1r88_A 34 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQW--DTFLSAELPDWLAANRGLAP 111 (280)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBH--HHHHHTHHHHHHHHHSCCCS
T ss_pred CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCCCCCcH--HHHHHHHHHHHHHHHCCCCC
Confidence 47999999995 45666765 34555 68999999997642 221110011111 24456788888887 6664
Q ss_pred -eEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 87 -RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 87 -~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+++|+||||||.+|+.+|.++|+++++++++++..
T Consensus 112 ~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~ 147 (280)
T 1r88_A 112 GGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFL 147 (280)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCC
T ss_pred CceEEEEECHHHHHHHHHHHhCccceeEEEEECCcc
Confidence 89999999999999999999999999999999864
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.2e-17 Score=126.09 Aligned_cols=115 Identities=10% Similarity=-0.019 Sum_probs=79.4
Q ss_pred cceeeEEEEeC-C-CCceEEEecCCCCChhhHH------------------Hhhhhc--CCceEEEecCCCCCCCCCCCC
Q 024681 4 LLEALHVRVVG-T-GDRILVLAHGFGTDQSAWQ------------------RILPYL--NHHRVIMFDLVCAGSVNPDYF 61 (264)
Q Consensus 4 ~~~~~~~~~~g-~-~~p~vv~~hG~~~~~~~~~------------------~~~~~l--~g~~v~~~d~~g~G~s~~~~~ 61 (264)
.+....|...+ + ..|+||++||.+++...+. .++..| +||.|+++|+||+|.|.....
T Consensus 104 ~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~ 183 (398)
T 3nuz_A 104 VSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASDLER 183 (398)
T ss_dssp CEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSGGGCSSGG
T ss_pred EEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCCccccccc
Confidence 34444454544 2 3489999999998776432 467777 899999999999999964310
Q ss_pred CC----------------cccchHHHHHHHHHHHHHHhC------CCeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 62 DF----------------RRYTTLDAYVDDLLNILDTLG------VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 62 ~~----------------~~~~~~~~~~~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
.. .........+.|+..+++.+. .+++.++||||||.+++.++...+ +++++|.+++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~~-~i~a~v~~~~ 262 (398)
T 3nuz_A 184 YTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDT-SIYAFVYNDF 262 (398)
T ss_dssp GTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHCT-TCCEEEEESC
T ss_pred cccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcCC-cEEEEEEecc
Confidence 00 001112234467777777763 247999999999999998888764 6898888765
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-15 Score=122.59 Aligned_cols=117 Identities=14% Similarity=0.105 Sum_probs=83.7
Q ss_pred CCcceeeEEEEeCCC-CceEEEecCCCCChh-hHH----------------------Hhhhhc--CCceEEEecCCCCCC
Q 024681 2 GDLLEALHVRVVGTG-DRILVLAHGFGTDQS-AWQ----------------------RILPYL--NHHRVIMFDLVCAGS 55 (264)
Q Consensus 2 g~~~~~~~~~~~g~~-~p~vv~~hG~~~~~~-~~~----------------------~~~~~l--~g~~v~~~d~~g~G~ 55 (264)
|..+....|...+.+ .|+||+.||++.+.. .+. .....| +||.|+++|.||+|.
T Consensus 51 G~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~~D~RG~G~ 130 (560)
T 3iii_A 51 GEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKVALRGSDK 130 (560)
T ss_dssp SCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEEEECTTSTT
T ss_pred CcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEEEcCCCCCC
Confidence 444444445554443 489999999988631 110 123456 899999999999999
Q ss_pred CCCCCCCCcccchHHHHHHHHHHHHHHhCC-----CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 56 VNPDYFDFRRYTTLDAYVDDLLNILDTLGV-----NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 56 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
|.... ..+ .....+|+.++++.+.. .++.++|||+||.+++.+|...|+.++++|..++....
T Consensus 131 S~G~~---~~~--~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d~ 198 (560)
T 3iii_A 131 SKGVL---SPW--SKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLNDM 198 (560)
T ss_dssp CCSCB---CTT--SHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCBH
T ss_pred CCCcc---ccC--ChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCcccc
Confidence 97542 222 13566777777776622 48999999999999999999999999999999986553
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-15 Score=124.50 Aligned_cols=122 Identities=13% Similarity=0.053 Sum_probs=79.6
Q ss_pred CCcceeeEEEEeCC-CCceEEEecCCCCChh--------hHHHh---h-hhc--CCceEEEecCCCCCCCCCCCCCCc--
Q 024681 2 GDLLEALHVRVVGT-GDRILVLAHGFGTDQS--------AWQRI---L-PYL--NHHRVIMFDLVCAGSVNPDYFDFR-- 64 (264)
Q Consensus 2 g~~~~~~~~~~~g~-~~p~vv~~hG~~~~~~--------~~~~~---~-~~l--~g~~v~~~d~~g~G~s~~~~~~~~-- 64 (264)
|..+....|...+. ..|+||++||++.... .|... . +.| +||.|+.+|+||+|.|........
T Consensus 47 G~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~g~~~~~~~~ 126 (652)
T 2b9v_A 47 GVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPP 126 (652)
T ss_dssp SCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCCC
T ss_pred CcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCCCcccccccc
Confidence 33333434444443 3478888998775421 12222 2 556 999999999999999975321111
Q ss_pred --ccchH-HHHHHHHHHHHHHhCC------CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 65 --RYTTL-DAYVDDLLNILDTLGV------NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 65 --~~~~~-~~~~~~~~~~~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
.|... ....+|+.++++++.. .++.++|+|+||.+++.+|.+.|++++++|.+++....
T Consensus 127 ~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 127 HGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp SBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred cccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 11100 1344555555554421 38999999999999999999899999999999987654
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.6e-15 Score=115.92 Aligned_cols=101 Identities=13% Similarity=-0.015 Sum_probs=66.0
Q ss_pred CceEEEecCCCCChh----h----------------H--HHhhhh-c-CCceEEEecCCCCCCCCCCCCCCcccchHHHH
Q 024681 17 DRILVLAHGFGTDQS----A----------------W--QRILPY-L-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAY 72 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~----~----------------~--~~~~~~-l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 72 (264)
.|+|.+-||..+... + + ..+... + +||.|+++|++|+|.+-.. ... .-...
T Consensus 106 ~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y~~----~~~-~~~~v 180 (462)
T 3guu_A 106 PKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIA----GYE-EGMAI 180 (462)
T ss_dssp CEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCTTC----HHH-HHHHH
T ss_pred CcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCcccC----Ccc-hhHHH
Confidence 478999999665321 1 1 113345 7 9999999999999974221 111 12233
Q ss_pred HHHHHHHHHHhCC---CeEEEEecChhHHHHHHHHHhCC----C-ccceeEEecCCCC
Q 024681 73 VDDLLNILDTLGV---NRCAYVGHSVSAMIGLLASIRRP----D-LFTKLILIGASPR 122 (264)
Q Consensus 73 ~~~~~~~~~~~~~---~~~~l~G~S~Gg~~a~~~a~~~p----~-~v~~~vl~~~~~~ 122 (264)
.+.+.+..+..+. .++.++|||+||..++.+|...| + .+.+.+..+++..
T Consensus 181 lD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~d 238 (462)
T 3guu_A 181 LDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVS 238 (462)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCB
T ss_pred HHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCC
Confidence 4444444443332 69999999999999988877543 3 5888888887643
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.6e-15 Score=114.47 Aligned_cols=98 Identities=18% Similarity=0.187 Sum_probs=71.5
Q ss_pred CCceEEEecCCCCChh-------hHHHhh----hhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHH-----
Q 024681 16 GDRILVLAHGFGTDQS-------AWQRIL----PYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL----- 77 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~-------~~~~~~----~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~----- 77 (264)
.+++|||+||++++.. .|..+. +.| .||+|+++|+||+|.|... ..++.+.+.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~~---------a~~l~~~i~~~~vD 75 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDR---------ACEAYAQLVGGTVD 75 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHHH---------HHHHHHHHHCEEEE
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcccc---------HHHHHHHHHhhhhh
Confidence 4578999999988642 476444 888 7999999999999977421 222222222
Q ss_pred -------------------HHHHH-hCCCeEEEEecChhHHHHHHHHHh-------------------CC------Cccc
Q 024681 78 -------------------NILDT-LGVNRCAYVGHSVSAMIGLLASIR-------------------RP------DLFT 112 (264)
Q Consensus 78 -------------------~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~-------------------~p------~~v~ 112 (264)
++++. .+.++++||||||||.++..++.+ +| ++|+
T Consensus 76 y~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~ 155 (387)
T 2dsn_A 76 YGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVL 155 (387)
T ss_dssp CCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEE
T ss_pred hhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCcccccccccee
Confidence 12223 467899999999999999999872 35 7899
Q ss_pred eeEEecCCCC
Q 024681 113 KLILIGASPR 122 (264)
Q Consensus 113 ~~vl~~~~~~ 122 (264)
++|+++++..
T Consensus 156 sLV~i~tP~~ 165 (387)
T 2dsn_A 156 SVTTIATPHD 165 (387)
T ss_dssp EEEEESCCTT
T ss_pred EEEEECCCCC
Confidence 9999998644
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.6e-16 Score=120.81 Aligned_cols=105 Identities=15% Similarity=0.226 Sum_probs=76.2
Q ss_pred CCceEEEecCCCCC--------hhhHH----Hhhhhc--CCceEEEecCCCCCCCCCCCCC----------------Ccc
Q 024681 16 GDRILVLAHGFGTD--------QSAWQ----RILPYL--NHHRVIMFDLVCAGSVNPDYFD----------------FRR 65 (264)
Q Consensus 16 ~~p~vv~~hG~~~~--------~~~~~----~~~~~l--~g~~v~~~d~~g~G~s~~~~~~----------------~~~ 65 (264)
.+++|||+||++++ ...|. .+.+.| .||+|+++|+||+|.|...... ...
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~ 130 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK 130 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence 44789999999874 34574 588888 7999999999999988421000 000
Q ss_pred cchHHHHHHHHHHHHHHhCC-CeEEEEecChhHHHHHHHHHh--------------------------CCCccceeEEec
Q 024681 66 YTTLDAYVDDLLNILDTLGV-NRCAYVGHSVSAMIGLLASIR--------------------------RPDLFTKLILIG 118 (264)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~--------------------------~p~~v~~~vl~~ 118 (264)
| +++++++|+.++++.++. ++++||||||||.+++.+|.. +|++|.++|+++
T Consensus 131 ~-~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~ 209 (431)
T 2hih_A 131 Y-GHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIA 209 (431)
T ss_dssp H-TCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEES
T ss_pred C-CHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEEC
Confidence 1 122233444555666653 799999999999999998876 689999999999
Q ss_pred CCC
Q 024681 119 ASP 121 (264)
Q Consensus 119 ~~~ 121 (264)
++.
T Consensus 210 tP~ 212 (431)
T 2hih_A 210 TPH 212 (431)
T ss_dssp CCT
T ss_pred CCC
Confidence 864
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=3.1e-13 Score=100.74 Aligned_cols=97 Identities=12% Similarity=0.197 Sum_probs=71.0
Q ss_pred CceEEEecCCCCChhhH-------HHhhhhc--C----CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 17 DRILVLAHGFGTDQSAW-------QRILPYL--N----HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~-------~~~~~~l--~----g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
-|+|+++||.+++...| ..++..| + ++.|+++|.+|- +.. ...| .+.+++++...++..
T Consensus 69 ~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~--~~~----~~~~--~~~~~~~l~~~i~~~ 140 (297)
T 1gkl_A 69 YNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG--NCT----AQNF--YQEFRQNVIPFVESK 140 (297)
T ss_dssp CEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST--TCC----TTTH--HHHHHHTHHHHHHHH
T ss_pred CCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC--ccc----hHHH--HHHHHHHHHHHHHHh
Confidence 47889999988766544 2445555 4 599999998752 221 1222 344567777777654
Q ss_pred -C--------------CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 84 -G--------------VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 84 -~--------------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
. ..++.++|+||||.+|+.++.++|+++++++++++..
T Consensus 141 ~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 141 YSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp SCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred CCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 2 2469999999999999999999999999999999864
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.52 E-value=6.7e-13 Score=97.93 Aligned_cols=180 Identities=11% Similarity=0.074 Sum_probs=107.7
Q ss_pred ceEEEecCCCC--ChhhHHHhhhhc---CC---ceEEEecCCCCC----------CCCCCC-------CC----Cccc--
Q 024681 18 RILVLAHGFGT--DQSAWQRILPYL---NH---HRVIMFDLVCAG----------SVNPDY-------FD----FRRY-- 66 (264)
Q Consensus 18 p~vv~~hG~~~--~~~~~~~~~~~l---~g---~~v~~~d~~g~G----------~s~~~~-------~~----~~~~-- 66 (264)
|+|+++||.+. ....+..+...+ .| +.|+++|+|+.+ .+.... .+ ....
T Consensus 49 Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 128 (275)
T 2qm0_A 49 PVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGA 128 (275)
T ss_dssp EEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCH
T ss_pred cEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCCh
Confidence 78999999753 222344444444 35 999999998731 111000 00 0011
Q ss_pred chHHHH-HHHHHHHHHH-hCC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHH
Q 024681 67 TTLDAY-VDDLLNILDT-LGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVF 142 (264)
Q Consensus 67 ~~~~~~-~~~~~~~~~~-~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (264)
..+.++ .+++...++. .+. +++.++|||+||.+++.++.++|+.+++++++++...+ .
T Consensus 129 ~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~~~---------------~--- 190 (275)
T 2qm0_A 129 HNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSIWW---------------N--- 190 (275)
T ss_dssp HHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCTTH---------------H---
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCceeee---------------C---
Confidence 012333 3555555554 233 58999999999999999999999999999999875210 0
Q ss_pred HHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh
Q 024681 143 RAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV 222 (264)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 222 (264)
. .. .. . ....+.... .......|+++++|+.|..++...
T Consensus 191 -~--~~---~~----~---------~~~~~~~~~----------------------~~~~~~~~~~l~~G~~D~~~~~~~ 229 (275)
T 2qm0_A 191 -N--KS---VL----E---------KEENLIIEL----------------------NNAKFETGVFLTVGSLEREHMVVG 229 (275)
T ss_dssp -H--HG---GG----G---------GTTHHHHHH----------------------HTCSSCEEEEEEEETTSCHHHHHH
T ss_pred -h--HH---HH----H---------HHHHHHhhh----------------------cccCCCceEEEEeCCcccchhhHH
Confidence 0 00 00 0 000000000 012346799999999999888888
Q ss_pred HHHHHHHc---CCC---ceEEEecCCCCcccccChhcHHHHH
Q 024681 223 AEYLQRHL---GGR---NTVELLKIEGHLPHLSAPAIVGPVI 258 (264)
Q Consensus 223 ~~~~~~~~---~~~---~~~~~~~~~gH~~~~~~~~~~~~~i 258 (264)
++++.+.+ ... +++.++++++|+... +..+.+.+
T Consensus 230 ~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~~--~~~l~~~l 269 (275)
T 2qm0_A 230 ANELSERLLQVNHDKLKFKFYEAEGENHASVV--PTSLSKGL 269 (275)
T ss_dssp HHHHHHHHHHCCCTTEEEEEEEETTCCTTTHH--HHHHHHHH
T ss_pred HHHHHHHHHhcccCCceEEEEECCCCCccccH--HHHHHHHH
Confidence 88888887 332 678899999996543 23344444
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.6e-12 Score=99.70 Aligned_cols=103 Identities=17% Similarity=0.183 Sum_probs=66.5
Q ss_pred CCceEEEecCCCCCh-hhHHHhhhhc--CCc----eEEEecCCCCC-CCCCCCCCCcccchHHHHHHHHHHHHHHh-C--
Q 024681 16 GDRILVLAHGFGTDQ-SAWQRILPYL--NHH----RVIMFDLVCAG-SVNPDYFDFRRYTTLDAYVDDLLNILDTL-G-- 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~-~~~~~~~~~l--~g~----~v~~~d~~g~G-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 84 (264)
..|+|+++||.+... ..+..++..| +|+ .|+++|.+|.+ ++.... ....+ .+.+++++...++.. .
T Consensus 196 ~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~-~~~~~--~~~l~~el~~~i~~~~~~~ 272 (403)
T 3c8d_A 196 ERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELP-CNADF--WLAVQQELLPLVKVIAPFS 272 (403)
T ss_dssp CCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSS-SCHHH--HHHHHHTHHHHHHHHSCCC
T ss_pred CCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCC-ChHHH--HHHHHHHHHHHHHHHCCCC
Confidence 458999999943110 0122344555 555 49999998732 221100 00111 233346666666653 2
Q ss_pred --CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.++++|+||||||.+|+.++.++|+++++++++++..
T Consensus 273 ~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~ 311 (403)
T 3c8d_A 273 DRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 311 (403)
T ss_dssp CCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred CCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEecccc
Confidence 2589999999999999999999999999999999864
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=3e-10 Score=84.70 Aligned_cols=124 Identities=11% Similarity=0.052 Sum_probs=76.2
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccc-eeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFT-KLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
++|+|.|+|+||.+++.++..+|+.++ +++++++.+........ .... .... +. .
T Consensus 11 ~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~------------------~~~~----~~~~-~~-~ 66 (318)
T 2d81_A 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY------------------YTSC----MYNG-YP-S 66 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC------------------GGGG----STTC-CC-C
T ss_pred ceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH------------------HHHH----hhcc-CC-C
Confidence 589999999999999999999999999 88888764322111100 0000 0000 00 0
Q ss_pred ChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCc-ccCEEEEecCCCCCcchhhHHHHHHHcCC-----CceEEE
Q 024681 165 VPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLV-RVPCVIIQTSKDVSVPVSVAEYLQRHLGG-----RNTVEL 238 (264)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~ 238 (264)
............. .....+.++ ..|++++||++|.++|++.++++.+.+.. .++++.
T Consensus 67 -~~~~~~~~~~~~~----------------~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~ 129 (318)
T 2d81_A 67 -ITTPTANMKSWSG----------------NQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVT 129 (318)
T ss_dssp -CHHHHHHHHHHBT----------------TTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEE
T ss_pred -CCCHHHHHHHhhc----------------ccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 0011111111100 001111222 35999999999999999999999987753 268889
Q ss_pred ecCCCCcccccC
Q 024681 239 LKIEGHLPHLSA 250 (264)
Q Consensus 239 ~~~~gH~~~~~~ 250 (264)
++++||.+..+.
T Consensus 130 ~~g~gH~~~~~~ 141 (318)
T 2d81_A 130 TTGAVHTFPTDF 141 (318)
T ss_dssp ETTCCSSEEESS
T ss_pred eCCCCCCCccCC
Confidence 999999765544
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.6e-08 Score=79.01 Aligned_cols=103 Identities=12% Similarity=0.028 Sum_probs=69.2
Q ss_pred CCceEEEecCCCCChhhHHHhhh------------------hc-CCceEEEecC-CCCCCCCCCCCCCccc-chHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP------------------YL-NHHRVIMFDL-VCAGSVNPDYFDFRRY-TTLDAYVD 74 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~------------------~l-~g~~v~~~d~-~g~G~s~~~~~~~~~~-~~~~~~~~ 74 (264)
.+|++|++||.++++..+..+.+ .+ +..+++.+|. +|.|.|.... ..+ .+-...++
T Consensus 47 ~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtGfS~~~~---~~~~~~~~~~a~ 123 (452)
T 1ivy_A 47 NSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDD---KFYATNDTEVAQ 123 (452)
T ss_dssp GSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESS---CCCCCBHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCCcCCcCC---CCCcCCcHHHHH
Confidence 46899999999988877644321 12 4678999997 6999995321 111 12333444
Q ss_pred H----HHHHHHH---hCCCeEEEEecChhHHHHHHHHHh----CCCccceeEEecCCC
Q 024681 75 D----LLNILDT---LGVNRCAYVGHSVSAMIGLLASIR----RPDLFTKLILIGASP 121 (264)
Q Consensus 75 ~----~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~ 121 (264)
| +..+++. +...+++|+|+|+||..+-.+|.. .+-.++++++.++..
T Consensus 124 ~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~~ 181 (452)
T 1ivy_A 124 SNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS 181 (452)
T ss_dssp HHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred HHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCcc
Confidence 4 3444443 245799999999999966655543 356789999999854
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.12 E-value=2e-09 Score=81.02 Aligned_cols=50 Identities=18% Similarity=0.268 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHh-CC-CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 72 YVDDLLNILDTL-GV-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 72 ~~~~~~~~~~~~-~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+.+++...++.. .. ....++||||||..++.++.++|+.+++++.++|..
T Consensus 121 l~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~ 172 (331)
T 3gff_A 121 IEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSL 172 (331)
T ss_dssp HHHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCT
T ss_pred HHHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchh
Confidence 334455555543 22 244799999999999999999999999999999864
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.8e-10 Score=100.81 Aligned_cols=203 Identities=13% Similarity=0.099 Sum_probs=115.1
Q ss_pred CCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHS 94 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S 94 (264)
..++++++|+.++....|..+...|..+.+++++.++ .++.++...+.+..+.. .++.++|||
T Consensus 1057 ~~~~L~~l~~~~g~~~~y~~la~~L~~~~v~~l~~~~----------------~~~~~~~~~~~i~~~~~~gp~~l~G~S 1120 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLGYGLMYQNLSSRLPSYKLCAFDFIE----------------EEDRLDRYADLIQKLQPEGPLTLFGYS 1120 (1304)
T ss_dssp SCCEEECCCCTTCBGGGGHHHHTTCCSCEEEECBCCC----------------STTHHHHHHHHHHHHCCSSCEEEEEET
T ss_pred cCCcceeecccccchHHHHHHHhcccccceEeecccC----------------HHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 3468999999999999998888877668888887632 22334444555555543 589999999
Q ss_pred hhHHHHHHHHHhC---CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc---ccCCCCChHH
Q 024681 95 VSAMIGLLASIRR---PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP---LAVGADVPAA 168 (264)
Q Consensus 95 ~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 168 (264)
+||.+|..+|.+. .+.+..++++++....... .......... .......... ..........
T Consensus 1121 ~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~-~~~~~~~~~~-----------~~~l~~~~~~~~~~~~~~l~~~~ 1188 (1304)
T 2vsq_A 1121 AGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVS-DLDGRTVESD-----------VEALMNVNRDNEALNSEAVKHGL 1188 (1304)
T ss_dssp THHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC------CHHHH-----------HHHHHTTCC-------CTTTGGG
T ss_pred CCchHHHHHHHHHHhCCCceeEEEEecCccccccc-ccccccchhh-----------HHHHHHhhhhhhhhcchhcchHH
Confidence 9999999998764 3458899999875432111 0000000000 0111110000 0000000111
Q ss_pred HHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
...+... ...... ... -..+++|++++.|+.|.. +.+....+.+......+++.++ ++|+.++
T Consensus 1189 l~~~~~~------------~~~~~~--~~~-~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~-G~H~~ml 1251 (1304)
T 2vsq_A 1189 KQKTHAF------------YSYYVN--LIS-TGQVKADIDLLTSGADFD-IPEWLASWEEATTGVYRMKRGF-GTHAEML 1251 (1304)
T ss_dssp HHHHHHH------------HHHHHC--------CBSSEEEEEECSSCCC-CCSSEECSSTTBSSCCCEEECS-SCTTGGG
T ss_pred HHHHHHH------------HHHHHH--Hhc-cCCcCCCEEEEEecCccc-cccchhhHHHHhCCCeEEEEeC-CCHHHHC
Confidence 1111110 000000 000 156789999999998863 2232333444444436788898 7998887
Q ss_pred cCh--hcHHHHHHHHhc
Q 024681 249 SAP--AIVGPVIRRALS 263 (264)
Q Consensus 249 ~~~--~~~~~~i~~fl~ 263 (264)
+.| +++++.|.++|.
T Consensus 1252 ~~~~~~~~a~~l~~~L~ 1268 (1304)
T 2vsq_A 1252 QGETLDRNAEILLEFLN 1268 (1304)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 755 588999999886
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.8e-09 Score=81.83 Aligned_cols=100 Identities=14% Similarity=0.099 Sum_probs=59.7
Q ss_pred EEEeCCCC-ceEEEecCCCCChhhHHHhhhhc-CCceEEEecC-----------CCCCCCCCCCCCCcccchHHHHHHHH
Q 024681 10 VRVVGTGD-RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDL-----------VCAGSVNPDYFDFRRYTTLDAYVDDL 76 (264)
Q Consensus 10 ~~~~g~~~-p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~-----------~g~G~s~~~~~~~~~~~~~~~~~~~~ 76 (264)
|...|+++ |+||.+||.. + .+ .||.++.++. +|+|.=-...........+..++=++
T Consensus 130 ~lP~g~~P~Pvii~~~~~~-----~-----~~~~G~A~i~f~~~~va~d~~~gsrG~g~f~~ly~~~~~~gal~aWAWg~ 199 (433)
T 4g4g_A 130 RKPSGAGPFPAIIGIGGAS-----I-----PIPSNVATITFNNDEFGAQMGSGSRGQGKFYDLFGRDHSAGSLTAWAWGV 199 (433)
T ss_dssp ECCSSSCCEEEEEEESCCC-----S-----CCCTTSEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHH
T ss_pred ECCCCCCCccEEEEECCCc-----c-----ccCCCeEEEEeCCcccccccCCCcCCccccccccCCccchHHHHHHHHhH
Confidence 33345444 5666677531 1 26 9999999987 22221000000011222343444344
Q ss_pred HHHHHHh----------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 77 LNILDTL----------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 77 ~~~~~~~----------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
..+++.+ +.++|.++|||+||..++.+++..+ +|+.+|...+.
T Consensus 200 ~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg 252 (433)
T 4g4g_A 200 DRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESG 252 (433)
T ss_dssp HHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCC
T ss_pred HHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCC
Confidence 4443333 3368999999999999999999875 89999998864
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.1e-09 Score=80.81 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=31.4
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
+++.++||||||.+++.++.+ |+.+++++++++.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 369999999999999999999 9999999999874
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.07 E-value=2.5e-09 Score=84.93 Aligned_cols=104 Identities=15% Similarity=0.021 Sum_probs=67.0
Q ss_pred CceEEEecCCC---CChhhHHHhhhhc--C-CceEEEecCC----CCCCCCCCC-CCCcccchHHHHHHHHHHHHHH---
Q 024681 17 DRILVLAHGFG---TDQSAWQRILPYL--N-HHRVIMFDLV----CAGSVNPDY-FDFRRYTTLDAYVDDLLNILDT--- 82 (264)
Q Consensus 17 ~p~vv~~hG~~---~~~~~~~~~~~~l--~-g~~v~~~d~~----g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 82 (264)
.|+||++||.+ ++...+......| + ++.|+++|+| |++.+.... ....++. +.+....+..+.+.
T Consensus 97 ~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~g-l~D~~~al~wv~~~i~~ 175 (489)
T 1qe3_A 97 LPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLG-LLDQAAALKWVRENISA 175 (489)
T ss_dssp EEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHH-HHHHHHHHHHHHHHGGG
T ss_pred CCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcc-hHHHHHHHHHHHHHHHH
Confidence 48999999955 4444433445556 4 4999999999 666553211 0122232 44444444333332
Q ss_pred hC--CCeEEEEecChhHHHHHHHHHhC--CCccceeEEecCCC
Q 024681 83 LG--VNRCAYVGHSVSAMIGLLASIRR--PDLFTKLILIGASP 121 (264)
Q Consensus 83 ~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~ 121 (264)
.+ .++|.|+|+|+||.++..++... ++.++++|+.++..
T Consensus 176 fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 176 FGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred hCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 23 35899999999999988877643 46799999998854
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.4e-08 Score=75.29 Aligned_cols=103 Identities=12% Similarity=0.141 Sum_probs=64.8
Q ss_pred ceEEEecCCCCChhhHHHhhh---hc--CCceEEEecCCCCCCCCCC--------------CCC------CcccchHHHH
Q 024681 18 RILVLAHGFGTDQSAWQRILP---YL--NHHRVIMFDLVCAGSVNPD--------------YFD------FRRYTTLDAY 72 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~---~l--~g~~v~~~d~~g~G~s~~~--------------~~~------~~~~~~~~~~ 72 (264)
|+|.++||++++...|..... .+ .+..++.+|..-.+.-.+. ..+ ...+.-.+.+
T Consensus 50 PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l 129 (299)
T 4fol_A 50 PTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYI 129 (299)
T ss_dssp CEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHH
T ss_pred CEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHHH
Confidence 899999999999998865432 22 5777887775321111000 000 0112213446
Q ss_pred HHHHHHHHHHh-C---------CCeEEEEecChhHHHHHHHHHhC--CCccceeEEecCC
Q 024681 73 VDDLLNILDTL-G---------VNRCAYVGHSVSAMIGLLASIRR--PDLFTKLILIGAS 120 (264)
Q Consensus 73 ~~~~~~~~~~~-~---------~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~ 120 (264)
.+++..+++.. . .++..|.||||||.-|+.+|.++ |++..++...++.
T Consensus 130 ~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~ 189 (299)
T 4fol_A 130 HKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPI 189 (299)
T ss_dssp HTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCC
T ss_pred HHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccc
Confidence 67777777642 1 24689999999999999999986 4566666666653
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.96 E-value=4.6e-08 Score=77.20 Aligned_cols=106 Identities=9% Similarity=0.068 Sum_probs=72.2
Q ss_pred CCceEEEecCCCCChhhHHHhhh-----------------hc-CCceEEEecC-CCCCCCCCCCCCC-----ccc-chHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP-----------------YL-NHHRVIMFDL-VCAGSVNPDYFDF-----RRY-TTLD 70 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~-----------------~l-~g~~v~~~d~-~g~G~s~~~~~~~-----~~~-~~~~ 70 (264)
..|++++++|.++++..+..+.+ .+ +..+++.+|. .|.|.|-...... ..+ .+.+
T Consensus 66 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~~~ 145 (483)
T 1ac5_A 66 DRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLE 145 (483)
T ss_dssp SCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHH
T ss_pred CCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCCcCcccccccccccCCCHH
Confidence 46899999999998877643321 12 4578999997 6999985432111 112 2467
Q ss_pred HHHHHHHHHHHHh-------CCCeEEEEecChhHHHHHHHHHhC------------CCccceeEEecCCC
Q 024681 71 AYVDDLLNILDTL-------GVNRCAYVGHSVSAMIGLLASIRR------------PDLFTKLILIGASP 121 (264)
Q Consensus 71 ~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~------------p~~v~~~vl~~~~~ 121 (264)
+.++|+..+++.. ...+++|.|+|+||..+-.+|... +-.++++++-++..
T Consensus 146 ~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~ 215 (483)
T 1ac5_A 146 DVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWI 215 (483)
T ss_dssp HHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCcc
Confidence 7888877776653 346999999999999887766421 12467888877643
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.96 E-value=8e-09 Score=77.35 Aligned_cols=92 Identities=12% Similarity=0.056 Sum_probs=57.8
Q ss_pred ceEEEecCCCCChhhHHHhhhhc-CCceEEEecC-----------CCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh--
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDL-----------VCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-- 83 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~-----------~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 83 (264)
|+||-+||... .+ +||.++.++. +|+|.=............+..++=++..+++.+
T Consensus 107 Pvii~i~~~~~----------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~gal~awaWg~~raid~L~~ 176 (375)
T 3pic_A 107 PAIIGYGGGSL----------PAPAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALEL 176 (375)
T ss_dssp EEEEEETTCSS----------CCCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCCcc----------ccCCCeEEEEecccccccccCCCCccceecccccCCccchHHHHHHHHHHHHHHHHHHh
Confidence 56677777311 16 8999999975 122210000000111223445555566555554
Q ss_pred ----CC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 84 ----GV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 84 ----~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
++ ++|.++|||+||..|+.+|+..+ +|+.+|...+.
T Consensus 177 ~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g 218 (375)
T 3pic_A 177 VPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESG 218 (375)
T ss_dssp CGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCC
T ss_pred CCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCC
Confidence 22 58999999999999999999875 89999988764
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.91 E-value=3.7e-09 Score=84.20 Aligned_cols=105 Identities=14% Similarity=0.045 Sum_probs=70.8
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc--CC-ceEEEecCC----CCCCCCCCCC----CCcccchHHHHHHHHHHHHH
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL--NH-HRVIMFDLV----CAGSVNPDYF----DFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l--~g-~~v~~~d~~----g~G~s~~~~~----~~~~~~~~~~~~~~~~~~~~ 81 (264)
..|+||++||.+ ++...+......| ++ +.|+++|+| |++.+..... ...++. +.|....+..+.+
T Consensus 98 ~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~g-l~D~~~al~wv~~ 176 (498)
T 2ogt_A 98 KRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLG-ILDQVAALRWVKE 176 (498)
T ss_dssp CEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHH-HHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCcc-cHHHHHHHHHHHH
Confidence 348999999977 4554443445566 44 999999999 8887754211 112232 5555555544444
Q ss_pred Hh---C--CCeEEEEecChhHHHHHHHHHhC--CCccceeEEecCCC
Q 024681 82 TL---G--VNRCAYVGHSVSAMIGLLASIRR--PDLFTKLILIGASP 121 (264)
Q Consensus 82 ~~---~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~ 121 (264)
.. + .++|.|+|+|.||.+++.++... +..++++|+.++..
T Consensus 177 ~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 223 (498)
T 2ogt_A 177 NIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSG 223 (498)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCc
Confidence 32 3 35899999999999998877653 45799999999854
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=3.8e-06 Score=65.01 Aligned_cols=103 Identities=15% Similarity=0.050 Sum_probs=68.9
Q ss_pred CCceEEEecCCCCChhhHHHhhh-----------------hc-CCceEEEecC-CCCCCCCCCCCCCcccchHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP-----------------YL-NHHRVIMFDL-VCAGSVNPDYFDFRRYTTLDAYVDDL 76 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~-----------------~l-~g~~v~~~d~-~g~G~s~~~~~~~~~~~~~~~~~~~~ 76 (264)
.+|++++++|.++++..+..+.+ .+ +..+++.+|. .|.|.|-..... ..+.++.++|+
T Consensus 43 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqPvGtGfSy~~~~~---~~~~~~~a~~~ 119 (421)
T 1cpy_A 43 KDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSG---VSNTVAAGKDV 119 (421)
T ss_dssp TSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCCSTTSTTCEESSCC---CCSSHHHHHHH
T ss_pred CCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccccCEEEecCCCcccccCCCCCC---CCChHHHHHHH
Confidence 46899999999988776643321 12 4568999995 599998432111 22355666776
Q ss_pred HHHHHHh-------CC--CeEEEEecChhHHHHHHHHHhC------CCccceeEEecCCC
Q 024681 77 LNILDTL-------GV--NRCAYVGHSVSAMIGLLASIRR------PDLFTKLILIGASP 121 (264)
Q Consensus 77 ~~~~~~~-------~~--~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~ 121 (264)
.++++.. .. .+++|.|.|+||..+-.+|... .-.++++++-++..
T Consensus 120 ~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~ 179 (421)
T 1cpy_A 120 YNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLT 179 (421)
T ss_dssp HHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCC
T ss_pred HHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCccc
Confidence 6666532 33 6899999999999887777542 12468888777643
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=2.1e-09 Score=99.60 Aligned_cols=94 Identities=13% Similarity=0.150 Sum_probs=0.0
Q ss_pred CCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeEEEEecC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRCAYVGHS 94 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S 94 (264)
.+++++|+|+.++....|..+.+.|. ..|+.+..+|. . ...+++++++++.+.+.... ..++.++|||
T Consensus 2241 ~~~~Lfc~~~agG~~~~y~~l~~~l~-~~v~~lq~pg~----~------~~~~i~~la~~~~~~i~~~~p~gpy~L~G~S 2309 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITVFHGLAAKLS-IPTYGLQCTGA----A------PLDSIQSLASYYIECIRQVQPEGPYRIAGYS 2309 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHHHHHHHHhhC-CcEEEEecCCC----C------CCCCHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 34689999999999999998888774 67888887761 1 11257888888877777664 3589999999
Q ss_pred hhHHHHHHHHHhCCC---ccc---eeEEecCC
Q 024681 95 VSAMIGLLASIRRPD---LFT---KLILIGAS 120 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~---~v~---~~vl~~~~ 120 (264)
+||.+|..+|.+..+ .+. .++++++.
T Consensus 2310 ~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2310 YGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp --------------------------------
T ss_pred HhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 999999999876432 344 67777764
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.68 E-value=4.8e-08 Score=78.66 Aligned_cols=103 Identities=15% Similarity=0.054 Sum_probs=65.0
Q ss_pred ceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hC
Q 024681 18 RILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LG 84 (264)
Q Consensus 18 p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 84 (264)
|+||++||.+ ++..........| .|+.|+++|+| |++.+........++. +.|....+.-+.+. .+
T Consensus 113 Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~g-l~D~~~al~wv~~~i~~fg 191 (543)
T 2ha2_A 113 PVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVG-LLDQRLALQWVQENIAAFG 191 (543)
T ss_dssp EEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHH-HHHHHHHHHHHHHHGGGGT
T ss_pred eEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCCCCccc-HHHHHHHHHHHHHHHHHhC
Confidence 8999999965 3333222233445 58999999999 4444421111122332 55555544444443 33
Q ss_pred --CCeEEEEecChhHHHHHHHHHhC--CCccceeEEecCCC
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIRR--PDLFTKLILIGASP 121 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~ 121 (264)
.++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 192 gDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 192 GDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 35899999999999987766542 45789999999854
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.64 E-value=9.1e-08 Score=76.88 Aligned_cols=105 Identities=18% Similarity=0.072 Sum_probs=66.5
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHHHH---
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNILDT--- 82 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--- 82 (264)
..|+||++||.+ ++..........| .|+.|+++|+| |++.+........++. +.|....+.-+.+.
T Consensus 106 ~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~g-l~D~~~al~wv~~~i~~ 184 (529)
T 1p0i_A 106 NATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMG-LFDQQLALQWVQKNIAA 184 (529)
T ss_dssp SEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHH-HHHHHHHHHHHHHHGGG
T ss_pred CCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCCCcCccc-HHHHHHHHHHHHHHHHH
Confidence 348999999955 3333222223445 58999999999 4544411111122332 55555554444433
Q ss_pred hCC--CeEEEEecChhHHHHHHHHHhC--CCccceeEEecCCC
Q 024681 83 LGV--NRCAYVGHSVSAMIGLLASIRR--PDLFTKLILIGASP 121 (264)
Q Consensus 83 ~~~--~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~ 121 (264)
.+. ++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 185 fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 185 FGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred hCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 343 4899999999999998877653 35789999999864
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.60 E-value=1e-07 Score=76.82 Aligned_cols=103 Identities=23% Similarity=0.225 Sum_probs=66.5
Q ss_pred CceEEEecCCC---CChhhHHHhhhhc--CCceEEEecCCC----CCCCCCCCCCCcccchHHHHHHHHHHHHHH---hC
Q 024681 17 DRILVLAHGFG---TDQSAWQRILPYL--NHHRVIMFDLVC----AGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LG 84 (264)
Q Consensus 17 ~p~vv~~hG~~---~~~~~~~~~~~~l--~g~~v~~~d~~g----~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 84 (264)
.|+||++||.+ ++..........| .|+.|+++|+|. +..+... ....++. +.|....+.-+.+. .+
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~-~~~~n~g-l~D~~~al~wv~~~i~~fg 192 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNST-SVPGNAG-LRDMVTLLKWVQRNAHFFG 192 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSS-SCCSCHH-HHHHHHHHHHHHHHTGGGT
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCccc-CCCCchh-HHHHHHHHHHHHHHHHHhC
Confidence 48999999944 2333222334455 899999999994 3333211 0122332 55555555444443 33
Q ss_pred --CCeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
.++|.|+|+|.||.++..++.. .+..++++|+.++..
T Consensus 193 gDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 193 GRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp EEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred CChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 3589999999999999888765 356799999999853
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=6.3e-07 Score=64.08 Aligned_cols=104 Identities=10% Similarity=-0.070 Sum_probs=73.7
Q ss_pred CCceEEEecCCCCChhhH-HHhhh------------------hc-CCceEEEecC-CCCCCCCCCCCCCccc--chHHHH
Q 024681 16 GDRILVLAHGFGTDQSAW-QRILP------------------YL-NHHRVIMFDL-VCAGSVNPDYFDFRRY--TTLDAY 72 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~-~~~~~------------------~l-~g~~v~~~d~-~g~G~s~~~~~~~~~~--~~~~~~ 72 (264)
.+|++++++|.++++..+ ..+.+ .+ +..+++.+|. .|.|.|-... ...+ .+.++.
T Consensus 47 ~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy~~~--~~~~~~~~~~~~ 124 (255)
T 1whs_A 47 PAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNT--SSDIYTSGDNRT 124 (255)
T ss_dssp SCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCEESS--GGGGGSCCHHHH
T ss_pred CCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCCCcC--ccccccCCHHHH
Confidence 468999999999888776 33221 12 4578999997 4999994321 1222 346777
Q ss_pred HHHHHHHHHH-------hCCCeEEEEecChhHHHHHHHHHhC------CCccceeEEecCCC
Q 024681 73 VDDLLNILDT-------LGVNRCAYVGHSVSAMIGLLASIRR------PDLFTKLILIGASP 121 (264)
Q Consensus 73 ~~~~~~~~~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~ 121 (264)
++|+.++++. ....+++|.|+|+||..+-.+|... .-.++++++.++..
T Consensus 125 a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~ 186 (255)
T 1whs_A 125 AHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLI 186 (255)
T ss_dssp HHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCcc
Confidence 8888777754 3457999999999999887776532 23578999999854
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.7e-06 Score=68.40 Aligned_cols=105 Identities=16% Similarity=0.175 Sum_probs=76.3
Q ss_pred CceEEEecCCCCChhhHH---Hhhhhc---CCceEEEecCCCCCCCCCCC---CC--CcccchHHHHHHHHHHHHHHhC-
Q 024681 17 DRILVLAHGFGTDQSAWQ---RILPYL---NHHRVIMFDLVCAGSVNPDY---FD--FRRYTTLDAYVDDLLNILDTLG- 84 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~---~~~~~l---~g~~v~~~d~~g~G~s~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~- 84 (264)
.|++|++-|-+ +...+. .+...+ -|-.++.+++|-+|.|.|-. .+ .-.|.+.++..+|+..+++.+.
T Consensus 43 gPIfl~~gGEg-~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~ 121 (472)
T 4ebb_A 43 GPIFFYTGNEG-DVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR 121 (472)
T ss_dssp CCEEEEECCSS-CHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCc-cccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHh
Confidence 56666665543 333221 122233 46688999999999997621 11 2356679999999999988762
Q ss_pred -----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 85 -----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 85 -----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
..|++++|-|+||++|..+-.++|+.|.+.+..+++..
T Consensus 122 ~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv~ 164 (472)
T 4ebb_A 122 DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVL 164 (472)
T ss_dssp HTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred hcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccceE
Confidence 24899999999999999999999999999888877543
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.53 E-value=1.9e-07 Score=75.05 Aligned_cols=105 Identities=17% Similarity=0.107 Sum_probs=66.0
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHHHH---
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNILDT--- 82 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--- 82 (264)
..|+||++||.+ ++..........| .|+.|+++++| |+..+........++. +.|....+.-+.+.
T Consensus 108 ~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~g-l~D~~~al~wv~~ni~~ 186 (537)
T 1ea5_A 108 STTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVG-LLDQRMALQWVHDNIQF 186 (537)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHH-HHHHHHHHHHHHHHGGG
T ss_pred CCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCCcCccc-cHHHHHHHHHHHHHHHH
Confidence 348999999954 2332222223444 69999999999 4444311111123333 55555555444443
Q ss_pred hC--CCeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 83 LG--VNRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 83 ~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
.+ .++|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 187 fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 187 FGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred hCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 33 3589999999999998877654 235799999999864
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=2.7e-07 Score=74.37 Aligned_cols=102 Identities=17% Similarity=0.139 Sum_probs=65.8
Q ss_pred CceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHHHH---h
Q 024681 17 DRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---L 83 (264)
Q Consensus 17 ~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 83 (264)
.|+||++||.+ ++...|... .| .|+.|+++|+| |++.+.... ...++. +.|....+.-+.+. .
T Consensus 115 ~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~g~vvv~~nYRlg~~gf~~~~~~~-~~~n~g-l~D~~~al~wv~~ni~~f 190 (542)
T 2h7c_A 115 LPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDEH-SRGNWG-HLDQVAALRWVQDNIASF 190 (542)
T ss_dssp EEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHHHHHCCCSSTT-CCCCHH-HHHHHHHHHHHHHHGGGG
T ss_pred CCEEEEECCCcccCCCccccCHH--HHHhcCCEEEEecCCCCccccCCCCCccc-Cccchh-HHHHHHHHHHHHHHHHHc
Confidence 48999999954 333333322 23 68999999999 555442211 122332 44544444443333 3
Q ss_pred CC--CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCCC
Q 024681 84 GV--NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASPR 122 (264)
Q Consensus 84 ~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 122 (264)
+. ++|.|+|+|.||.++..++.. .+..++++|+.++...
T Consensus 191 ggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 191 GGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 33 589999999999999888775 3568999999988643
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.38 E-value=4.9e-07 Score=72.47 Aligned_cols=104 Identities=12% Similarity=-0.013 Sum_probs=62.6
Q ss_pred CceEEEecCCCC---ChhhHH--Hhhhhc-CCceEEEecCC----CCCCCCCCC-CCCcccchHHHHHHHHHHHHHH---
Q 024681 17 DRILVLAHGFGT---DQSAWQ--RILPYL-NHHRVIMFDLV----CAGSVNPDY-FDFRRYTTLDAYVDDLLNILDT--- 82 (264)
Q Consensus 17 ~p~vv~~hG~~~---~~~~~~--~~~~~l-~g~~v~~~d~~----g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 82 (264)
.|+||++||.+. +...|. .++... .|+.|+++|+| |++.+.... ....++. +.|....+.-+.+.
T Consensus 102 ~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~g-l~D~~~al~wv~~ni~~ 180 (522)
T 1ukc_A 102 LPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAG-LLDQRKALRWVKQYIEQ 180 (522)
T ss_dssp EEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHH-HHHHHHHHHHHHHHGGG
T ss_pred CCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChh-HHHHHHHHHHHHHHHHH
Confidence 489999999653 222232 233334 69999999999 455442100 0011222 44444444443333
Q ss_pred hC--CCeEEEEecChhHHHHHHHHHhC----CCccceeEEecCCC
Q 024681 83 LG--VNRCAYVGHSVSAMIGLLASIRR----PDLFTKLILIGASP 121 (264)
Q Consensus 83 ~~--~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~ 121 (264)
.+ .++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 181 fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 181 FGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred cCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 33 35899999999997766555432 56789999988753
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=1.5e-06 Score=70.71 Aligned_cols=105 Identities=13% Similarity=0.007 Sum_probs=63.8
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCC----CCCCCCC------CCCCCcccchHHHHHHHHHHH
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLV----CAGSVNP------DYFDFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~----g~G~s~~------~~~~~~~~~~~~~~~~~~~~~ 79 (264)
..|+||++||.+ ++..........| .++.|+++|+| |+....+ ......++. +.|....+.-+
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~g-l~D~~~al~wv 218 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVG-LWDQALAIRWL 218 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHH-HHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCccc-HHHHHHHHHHH
Confidence 348999999954 3332222223445 58999999999 4443211 000122332 45544444444
Q ss_pred HHH---hC--CCeEEEEecChhHHHHHHHHHhC--CCccceeEEecCCC
Q 024681 80 LDT---LG--VNRCAYVGHSVSAMIGLLASIRR--PDLFTKLILIGASP 121 (264)
Q Consensus 80 ~~~---~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~ 121 (264)
.+. .+ .++|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 219 ~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 219 KDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 333 23 35899999999999887766542 35789999998753
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=7.2e-06 Score=59.88 Aligned_cols=81 Identities=14% Similarity=0.153 Sum_probs=50.7
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEE-ecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCeE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIM-FDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNRC 88 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~-~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 88 (264)
.+..||.+||... +...+ .++.+.. .|.++. ... ....+..+..+.+++...++.+ ...++
T Consensus 73 ~~~iVva~RGT~~-------~~d~l~d~~~~~~~~~~~~~~--~~v---h~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i 140 (269)
T 1tib_A 73 NKLIVLSFRGSRS-------IENWIGNLNFDLKEINDICSG--CRG---HDGFTSSWRSVADTLRQKVEDAVREHPDYRV 140 (269)
T ss_dssp TTEEEEEECCCSC-------THHHHTCCCCCEEECTTTSTT--CEE---EHHHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCEEEEEEeCCCC-------HHHHHHhcCeeeeecCCCCCC--CEe---cHHHHHHHHHHHHHHHHHHHHHHHHCCCceE
Confidence 3458899999863 22333 4555555 455531 110 1122234556666776666654 33589
Q ss_pred EEEecChhHHHHHHHHHhCC
Q 024681 89 AYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p 108 (264)
++.||||||.+|..++....
T Consensus 141 ~l~GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 141 VFTGHSLGGALATVAGADLR 160 (269)
T ss_dssp EEEEETHHHHHHHHHHHHHT
T ss_pred EEecCChHHHHHHHHHHHHH
Confidence 99999999999999988754
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.19 E-value=3.1e-06 Score=68.60 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=62.4
Q ss_pred CceEEEecCCCC---ChhhH------HHhhhhc---CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 17 DRILVLAHGFGT---DQSAW------QRILPYL---NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 17 ~p~vv~~hG~~~---~~~~~------~~~~~~l---~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
.|+||++||.+. +.... ......| .++.|+++|+| |+..+.... .+.++. +.|....+.-+.
T Consensus 98 ~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~-~pgn~g-l~D~~~Al~wv~ 175 (579)
T 2bce_A 98 LPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSN-LPGNYG-LWDQHMAIAWVK 175 (579)
T ss_dssp EEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTT-CCCCHH-HHHHHHHHHHHH
T ss_pred CeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCC-CCCccc-hHHHHHHHHHHH
Confidence 489999999652 22111 1112344 47999999999 454432111 123332 555555554444
Q ss_pred HH---hCC--CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCC
Q 024681 81 DT---LGV--NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGAS 120 (264)
Q Consensus 81 ~~---~~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~ 120 (264)
+. .+. ++|.|+|+|.||..+..++.. ....++++|+.++.
T Consensus 176 ~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 176 RNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred HHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 33 343 589999999999998777654 34578999998874
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.16 E-value=2.4e-06 Score=68.89 Aligned_cols=104 Identities=16% Similarity=0.102 Sum_probs=62.2
Q ss_pred CceEEEecCCCCC---hhhHH--Hhhh-hc---CCceEEEecCCCC----CCCCCC-CCCCcccchHHHHHHHHHHHHHH
Q 024681 17 DRILVLAHGFGTD---QSAWQ--RILP-YL---NHHRVIMFDLVCA----GSVNPD-YFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 17 ~p~vv~~hG~~~~---~~~~~--~~~~-~l---~g~~v~~~d~~g~----G~s~~~-~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.|+||++||.+.. ...|. .++. .+ .++.|+++|+|.- ..+... .....++. +.|....+.-+.+.
T Consensus 122 ~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~g-l~D~~~Al~wv~~n 200 (544)
T 1thg_A 122 LPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAG-LHDQRKGLEWVSDN 200 (544)
T ss_dssp EEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHH-HHHHHHHHHHHHHH
T ss_pred CcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchh-HHHHHHHHHHHHHH
Confidence 4899999996532 22231 2232 23 4799999999942 111000 00012222 45555554444443
Q ss_pred ---hC--CCeEEEEecChhHHHHHHHHHhC--------CCccceeEEecCCC
Q 024681 83 ---LG--VNRCAYVGHSVSAMIGLLASIRR--------PDLFTKLILIGASP 121 (264)
Q Consensus 83 ---~~--~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~ 121 (264)
.+ .++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 201 i~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 201 IANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 23 35899999999999887766542 45789999998754
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=98.13 E-value=5.2e-06 Score=54.90 Aligned_cols=59 Identities=22% Similarity=0.280 Sum_probs=53.6
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcC------------------------CCceEEEecCCCCcccccChhcHHHHHH
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLG------------------------GRNTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
.+++|+.+|+.|.+++.-..+.+.+.+. + .++..+.++||+++.++|+...+.+.
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~-Ltf~~V~~AGHmVP~dqP~~a~~m~~ 142 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKG-LTLVSVRGAGHEVPLHRPRQALVLFQ 142 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETT-EEEEEETTCCSSHHHHSHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCe-EEEEEECCCcccCcccCHHHHHHHHH
Confidence 5799999999999999999998888875 3 67888999999999999999999999
Q ss_pred HHhc
Q 024681 260 RALS 263 (264)
Q Consensus 260 ~fl~ 263 (264)
.||.
T Consensus 143 ~fl~ 146 (153)
T 1whs_B 143 YFLQ 146 (153)
T ss_dssp HHHH
T ss_pred HHHC
Confidence 9985
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=5.6e-06 Score=66.57 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=61.5
Q ss_pred CceEEEecCCCC---ChhhHH--Hhhh-hc---CCceEEEecCCCC----CCCCC-CCCCCcccchHHHHHHHHHHHHHH
Q 024681 17 DRILVLAHGFGT---DQSAWQ--RILP-YL---NHHRVIMFDLVCA----GSVNP-DYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 17 ~p~vv~~hG~~~---~~~~~~--~~~~-~l---~g~~v~~~d~~g~----G~s~~-~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.|+||++||.+. +...|. .++. .+ .++.|+++|+|.- ..+.. ......++. +.|....+.-+.+.
T Consensus 114 ~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~g-l~D~~~Al~wv~~n 192 (534)
T 1llf_A 114 LPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAG-LKDQRLGMQWVADN 192 (534)
T ss_dssp EEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHH-HHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCchh-HHHHHHHHHHHHHH
Confidence 389999999653 333332 2332 23 5899999999942 11110 000012222 44555444444433
Q ss_pred ---hC--CCeEEEEecChhHHHHHHHHHhC--------CCccceeEEecCCC
Q 024681 83 ---LG--VNRCAYVGHSVSAMIGLLASIRR--------PDLFTKLILIGASP 121 (264)
Q Consensus 83 ---~~--~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~ 121 (264)
.+ .++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 193 i~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 193 IAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 33 35899999999998776655442 45789999998753
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=1.1e-05 Score=65.52 Aligned_cols=100 Identities=17% Similarity=0.156 Sum_probs=63.8
Q ss_pred CceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHHHH---h
Q 024681 17 DRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---L 83 (264)
Q Consensus 17 ~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 83 (264)
.|+||++||.+ ++...|.. ..| .++.|+++|+| |+..+.... .+.++. +.|....+.-+.+. .
T Consensus 131 ~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~-~~~n~g-l~D~~~al~wv~~ni~~f 206 (574)
T 3bix_A 131 KPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQA-AKGNYG-LLDLIQALRWTSENIGFF 206 (574)
T ss_dssp EEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSS-CCCCHH-HHHHHHHHHHHHHHGGGG
T ss_pred CcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCC-CCCccc-HHHHHHHHHHHHHHHHHh
Confidence 48999999955 33333332 345 47999999999 333332110 122333 55555555544443 3
Q ss_pred CC--CeEEEEecChhHHHHHHHHHhCC---CccceeEEecCC
Q 024681 84 GV--NRCAYVGHSVSAMIGLLASIRRP---DLFTKLILIGAS 120 (264)
Q Consensus 84 ~~--~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~ 120 (264)
+. ++|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 207 ggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 207 GGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 33 58999999999999988876543 457888888764
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.92 E-value=5e-05 Score=55.73 Aligned_cols=83 Identities=16% Similarity=0.185 Sum_probs=46.1
Q ss_pred CCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCeEEEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNRCAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~ 91 (264)
.+..||.+||.....+ | ... .++.....|....|... ..-+..+..+.+++...++.+ ...++++.
T Consensus 73 ~~~iVvafRGT~~~~d-~---~~d-~~~~~~~~~~~~~~~vh-----~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vt 142 (279)
T 1tia_A 73 NSAVVLAFRGSYSVRN-W---VAD-ATFVHTNPGLCDGCLAE-----LGFWSSWKLVRDDIIKELKEVVAQNPNYELVVV 142 (279)
T ss_pred CCEEEEEEeCcCCHHH-H---HHh-CCcEeecCCCCCCCccC-----hhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 3458899999874222 1 111 23333333432111111 122223444555555555443 33589999
Q ss_pred ecChhHHHHHHHHHhCC
Q 024681 92 GHSVSAMIGLLASIRRP 108 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p 108 (264)
|||+||.+|..+|....
T Consensus 143 GHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 143 GHSLGAAVATLAATDLR 159 (279)
T ss_pred ecCHHHHHHHHHHHHHH
Confidence 99999999998887653
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00011 Score=53.73 Aligned_cols=63 Identities=11% Similarity=0.104 Sum_probs=38.0
Q ss_pred CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCeEEEEecChhHHHHHHHHHhC
Q 024681 42 HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 42 g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
++.+...++||...... ....+..+..+.+++...++.+ ...++++.||||||.+|..+|...
T Consensus 91 d~~~~~~~~p~~~~~~v---h~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKV---HKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEE---cHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 44555666776421111 1122334555666666555543 234699999999999999888765
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00053 Score=50.31 Aligned_cols=104 Identities=12% Similarity=-0.001 Sum_probs=70.8
Q ss_pred CCceEEEecCCCCChhhHHHhhh---h--------c--------CCceEEEecCC-CCCCCCCCCCCCcccchHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP---Y--------L--------NHHRVIMFDLV-CAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~---~--------l--------~g~~v~~~d~~-g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
..|++|++.|.++++..+..+.+ . | +..+++.+|.| |.|.|-.... ....+..+.++|
T Consensus 49 ~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~PvGtGfSy~~~~--~~~~~~~~~a~d 126 (300)
T 4az3_A 49 NSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDK--FYATNDTEVAQS 126 (300)
T ss_dssp TSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEETTC--CCCCBHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhcCCCcccccccCCC--cccccchhhHHH
Confidence 45899999999988877644332 1 1 24589999987 8888843211 111246677777
Q ss_pred HHHHHHHh-------CCCeEEEEecChhHHHHHHHHHhC----CCccceeEEecCCC
Q 024681 76 LLNILDTL-------GVNRCAYVGHSVSAMIGLLASIRR----PDLFTKLILIGASP 121 (264)
Q Consensus 76 ~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~ 121 (264)
+..++... ...+++|.|-|+||..+-.+|... .-.++++++-++..
T Consensus 127 ~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~~ 183 (300)
T 4az3_A 127 NFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS 183 (300)
T ss_dssp HHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred HHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCcc
Confidence 77666532 446899999999999887777642 22478888888743
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00048 Score=49.25 Aligned_cols=97 Identities=15% Similarity=0.068 Sum_probs=62.4
Q ss_pred CCceEEEecCCCCCh----hhHHHhhhhc-CCceEEEec-CCCCCCCCCCCCCCccc-chHHHHHHHHHHHHHH----hC
Q 024681 16 GDRILVLAHGFGTDQ----SAWQRILPYL-NHHRVIMFD-LVCAGSVNPDYFDFRRY-TTLDAYVDDLLNILDT----LG 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~----~~~~~~~~~l-~g~~v~~~d-~~g~G~s~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~ 84 (264)
.+|+|++.+|.+... .....+.+.| ..+..-.++ +|-.. ..| .+..+=++++...++. -.
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~~~~q~Vg~YpA~~---------~~y~~S~~~G~~~~~~~i~~~~~~CP 72 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDIYRWQPIGNYPAAA---------FPMWPSVEKGVAELILQIELKLDADP 72 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTTSEEEECCSCCCCS---------SSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCcc---------cCccchHHHHHHHHHHHHHHHHhhCC
Confidence 468999999987742 2246777888 666555553 54221 112 1234444444444443 34
Q ss_pred CCeEEEEecChhHHHHHHHHHh-----------CCCccceeEEecCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIR-----------RPDLFTKLILIGASP 121 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~-----------~p~~v~~~vl~~~~~ 121 (264)
..+++|+|+|.|+.++-.++.. ..++|.++++++-+.
T Consensus 73 ~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~ 120 (254)
T 3hc7_A 73 YADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPM 120 (254)
T ss_dssp TCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTT
T ss_pred CCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCC
Confidence 4799999999999999877654 235788999998653
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00014 Score=48.17 Aligned_cols=60 Identities=15% Similarity=0.196 Sum_probs=50.7
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcCCC----------------------------ceEEEecCCCCcccccChhcHH
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLGGR----------------------------NTVELLKIEGHLPHLSAPAIVG 255 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~gH~~~~~~~~~~~ 255 (264)
.++||+.+|+.|.+++.-..+.+.+.+.-. .+++.+.++||+++.++|+...
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 142 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 142 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHH
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHH
Confidence 679999999999999988888877765311 2466778999999999999999
Q ss_pred HHHHHHhc
Q 024681 256 PVIRRALS 263 (264)
Q Consensus 256 ~~i~~fl~ 263 (264)
+.+.+||.
T Consensus 143 ~m~~~fl~ 150 (155)
T 4az3_B 143 TMFSRFLN 150 (155)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99999986
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0017 Score=44.51 Aligned_cols=101 Identities=9% Similarity=-0.044 Sum_probs=60.6
Q ss_pred eEEEecCCCCCh------h-hHHHhhhhc--CCceEEEe--cCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCe
Q 024681 19 ILVLAHGFGTDQ------S-AWQRILPYL--NHHRVIMF--DLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNR 87 (264)
Q Consensus 19 ~vv~~hG~~~~~------~-~~~~~~~~l--~g~~v~~~--d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (264)
.||+..|..... . ....+...+ +...|+.+ ++|-.-..... ..........++.+.+......-...+
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~-~~~S~~~G~~~~~~~i~~~~~~CP~tk 98 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNAL-PRGTSSAAIREMLGLFQQANTKCPDAT 98 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCcccC-ccccHHHHHHHHHHHHHHHHHhCCCCc
Confidence 567777765542 1 223333444 45778888 77743211000 000000124455555555555556689
Q ss_pred EEEEecChhHHHHHHHHHhCC----CccceeEEecCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRP----DLFTKLILIGAS 120 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~ 120 (264)
++|+|+|.|+.++-.++...| ++|.++++++-+
T Consensus 99 iVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 135 (197)
T 3qpa_A 99 LIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYT 135 (197)
T ss_dssp EEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred EEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCC
Confidence 999999999999988777666 689999999864
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00048 Score=50.24 Aligned_cols=39 Identities=21% Similarity=0.351 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHh----CCCeEEEEecChhHHHHHHHHHhC
Q 024681 69 LDAYVDDLLNILDTL----GVNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
+..+.+++...++.+ ...++++.|||+||.+|..++...
T Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 116 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 444555555555443 346899999999999998887665
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0018 Score=46.78 Aligned_cols=103 Identities=14% Similarity=0.100 Sum_probs=64.6
Q ss_pred CCceEEEecCCCCChhhH-HHhhh---h--------c--------CCceEEEecC-CCCCCCCCCCCCCccc-chHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAW-QRILP---Y--------L--------NHHRVIMFDL-VCAGSVNPDYFDFRRY-TTLDAYV 73 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~-~~~~~---~--------l--------~g~~v~~~d~-~g~G~s~~~~~~~~~~-~~~~~~~ 73 (264)
.+|++++++|.++++..+ -.+.+ . | +..+++.+|. .|.|.|-.... ..+ .+-++.+
T Consensus 53 ~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~--~~~~~~d~~~a 130 (270)
T 1gxs_A 53 AAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSYSNTS--SDLSMGDDKMA 130 (270)
T ss_dssp GSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTTCEESSG--GGGCCCHHHHH
T ss_pred CCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEeccccccccCCCCC--ccccCCcHHHH
Confidence 468999999998888774 43321 1 1 3468999996 59999843211 111 1345566
Q ss_pred HHHHHHHHH-------hCCCeEEEEecChhHHHHHHHH---HhC----CCccceeEEecCCC
Q 024681 74 DDLLNILDT-------LGVNRCAYVGHSVSAMIGLLAS---IRR----PDLFTKLILIGASP 121 (264)
Q Consensus 74 ~~~~~~~~~-------~~~~~~~l~G~S~Gg~~a~~~a---~~~----p~~v~~~vl~~~~~ 121 (264)
+|+.++++. ....+++|.|.| |-.+...+. ... .-.++++++.++..
T Consensus 131 ~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkGi~ign~~~ 191 (270)
T 1gxs_A 131 QDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQGLLVSSGLT 191 (270)
T ss_dssp HHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEEEEEESCCC
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeeeEEEeCCcc
Confidence 676665543 345699999999 654443222 222 13578999998853
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0028 Score=43.54 Aligned_cols=101 Identities=12% Similarity=-0.058 Sum_probs=60.1
Q ss_pred eEEEecCCCCChh----hHHHhhhhc------CCceEEEe--cCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC
Q 024681 19 ILVLAHGFGTDQS----AWQRILPYL------NHHRVIMF--DLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 19 ~vv~~hG~~~~~~----~~~~~~~~l------~g~~v~~~--d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (264)
.||+..|.+.... .-..+...| +...|+.+ ++|-.-..... ..........+..+.+......-...
T Consensus 27 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~-~~~S~~~G~~~~~~~i~~~~~~CP~t 105 (201)
T 3dcn_A 27 IYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFL-PDGTSSAAINEARRLFTLANTKCPNA 105 (201)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTS
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccc-cCCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 6777777655432 112344433 35678888 67632110000 00000012445555555555555668
Q ss_pred eEEEEecChhHHHHHHHHHhCC----CccceeEEecCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRP----DLFTKLILIGAS 120 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~ 120 (264)
+++|+|+|.|+.++-.++...| ++|.++++++-+
T Consensus 106 kiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 143 (201)
T 3dcn_A 106 AIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYT 143 (201)
T ss_dssp EEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCT
T ss_pred cEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCc
Confidence 9999999999999988776655 578999999864
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00092 Score=44.37 Aligned_cols=60 Identities=22% Similarity=0.190 Sum_probs=50.5
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcC----------------CC----------ceEEEecCCCCcccccChhcHHHH
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLG----------------GR----------NTVELLKIEGHLPHLSAPAIVGPV 257 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~----------------~~----------~~~~~~~~~gH~~~~~~~~~~~~~ 257 (264)
.+++|+.+|+.|.+++.-..+.+.+.+. +. .++..+.++||+++.++|+...+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 6799999999999999888888777652 11 346678899999999999999999
Q ss_pred HHHHhc
Q 024681 258 IRRALS 263 (264)
Q Consensus 258 i~~fl~ 263 (264)
+.+||.
T Consensus 146 ~~~fl~ 151 (158)
T 1gxs_B 146 FKQFLK 151 (158)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 999985
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0069 Score=41.11 Aligned_cols=101 Identities=10% Similarity=-0.044 Sum_probs=58.1
Q ss_pred eEEEecCCCCChh--------hHHHhhhhc-CCceEEEec--CCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCe
Q 024681 19 ILVLAHGFGTDQS--------AWQRILPYL-NHHRVIMFD--LVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNR 87 (264)
Q Consensus 19 ~vv~~hG~~~~~~--------~~~~~~~~l-~g~~v~~~d--~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (264)
.||+..|...... ....+...+ ....++.++ +|-.-...... .........+....+......-...+
T Consensus 16 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~~~~v~v~~V~~~YpA~~~~~~~~-~~s~~~g~~~~~~~i~~~~~~CP~tk 94 (187)
T 3qpd_A 16 TFIFARASTEPGLLGISTGPAVCNRLKLARSGDVACQGVGPRYTADLPSNALP-EGTSQAAIAEAQGLFEQAVSKCPDTQ 94 (187)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHSTTCEEEEECCSSCCCCGGGGGST-TSSCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred EEEEeeCCCCCCCCCccccHHHHHHHHHHcCCCceEEeeCCcccCcCcccccc-ccchhHHHHHHHHHHHHHHHhCCCCc
Confidence 5666666544331 223344445 567888888 76321100000 00000012333333444444555689
Q ss_pred EEEEecChhHHHHHHHHHhCC----CccceeEEecCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRP----DLFTKLILIGAS 120 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~ 120 (264)
++|+|+|.|+.++-.++...| ++|.++++++-+
T Consensus 95 ivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 131 (187)
T 3qpd_A 95 IVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYT 131 (187)
T ss_dssp EEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCT
T ss_pred EEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCC
Confidence 999999999999988776655 578999999864
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.002 Score=46.52 Aligned_cols=44 Identities=18% Similarity=0.176 Sum_probs=28.0
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHh----CCCccceeEEecC
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIR----RPDLFTKLILIGA 119 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~ 119 (264)
+..+++.....++.+.|||+||.+|..+|.. .|...-.++..++
T Consensus 114 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~ 161 (258)
T 3g7n_A 114 VKALIAKYPDYTLEAVGHSLGGALTSIAHVALAQNFPDKSLVSNALNA 161 (258)
T ss_dssp HHHHHHHSTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSCEEEEEESC
T ss_pred HHHHHHhCCCCeEEEeccCHHHHHHHHHHHHHHHhCCCCceeEEEecC
Confidence 3334444444699999999999999877654 4432223444554
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0015 Score=45.41 Aligned_cols=99 Identities=11% Similarity=0.120 Sum_probs=56.3
Q ss_pred eEEEecCCCCCh------hhHHHhhhhcCCceEEEecCCCC-CCCCCCCCCCccc-chHHHHHHHHHHHHHHh----CCC
Q 024681 19 ILVLAHGFGTDQ------SAWQRILPYLNHHRVIMFDLVCA-GSVNPDYFDFRRY-TTLDAYVDDLLNILDTL----GVN 86 (264)
Q Consensus 19 ~vv~~hG~~~~~------~~~~~~~~~l~g~~v~~~d~~g~-G~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~ 86 (264)
.||+..|.+... .....+.+.+.+-.+..+++|-. |.+... ...| .+..+=++++...++.. ...
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~---~~~y~~S~~~G~~~~~~~i~~~~~~CP~t 82 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCG---GASYSSSVAQGIAAVASAVNSFNSQCPST 82 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGT---SCCHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhCCCCceEEeeccccccccccC---CcchhhhHHHHHHHHHHHHHHHHHhCCCC
Confidence 456666655432 22233333333447888888853 222110 1223 12334444444444433 457
Q ss_pred eEEEEecChhHHHHHHHHH--------------hCC----CccceeEEecCC
Q 024681 87 RCAYVGHSVSAMIGLLASI--------------RRP----DLFTKLILIGAS 120 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~--------------~~p----~~v~~~vl~~~~ 120 (264)
+++|+|+|.|+.++-.+.. ..| ++|.++++++-+
T Consensus 83 kivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1g66_A 83 KIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred cEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCC
Confidence 9999999999999987764 122 468888888864
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0022 Score=46.92 Aligned_cols=46 Identities=24% Similarity=0.344 Sum_probs=30.8
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHHHHHHh----CCCccceeEEecCC
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIR----RPDLFTKLILIGAS 120 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~ 120 (264)
.+..+++.....++.+.|||+||.+|..+|.. .|.....++..+++
T Consensus 127 ~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~P 176 (279)
T 3uue_A 127 AVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLP 176 (279)
T ss_dssp HHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCC
T ss_pred HHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 33344444455789999999999999887754 34445556666653
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.019 Score=42.30 Aligned_cols=102 Identities=12% Similarity=0.036 Sum_probs=59.1
Q ss_pred eEEEecCCCCCh-----------------hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccc-hHHHHHHHHHH
Q 024681 19 ILVLAHGFGTDQ-----------------SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYT-TLDAYVDDLLN 78 (264)
Q Consensus 19 ~vv~~hG~~~~~-----------------~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~-~~~~~~~~~~~ 78 (264)
.||+.-|.+... .....+...+ ....++.++++-.-...........|. +..+=++++..
T Consensus 42 ~vi~ARGT~E~~~~g~p~~p~~~~~g~~~~v~~~L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~ 121 (302)
T 3aja_A 42 MMVSIPGTWESSPTDDPFNPTQFPLSLMSNISKPLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVK 121 (302)
T ss_dssp EEEEECCTTSCCTTSCSSSCCSCTTCTTHHHHHHHHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCCCCCcCcccccchhHHHHHHHHHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHHH
Confidence 677777865543 1223444455 456678888875421100000012231 23333344444
Q ss_pred HHHH----hCCCeEEEEecChhHHHHHHHHHh--------CCCccceeEEecCC
Q 024681 79 ILDT----LGVNRCAYVGHSVSAMIGLLASIR--------RPDLFTKLILIGAS 120 (264)
Q Consensus 79 ~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~--------~p~~v~~~vl~~~~ 120 (264)
.++. --..+++|+|+|.|+.++-.++.. .+++|+++++++-+
T Consensus 122 ~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP 175 (302)
T 3aja_A 122 AMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADG 175 (302)
T ss_dssp HHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCT
T ss_pred HHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCC
Confidence 4433 345799999999999998776642 24689999999864
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0011 Score=48.13 Aligned_cols=49 Identities=18% Similarity=0.227 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHH----hCCCeEEEEecChhHHHHHHHHHhC---CCccceeEEecCC
Q 024681 71 AYVDDLLNILDT----LGVNRCAYVGHSVSAMIGLLASIRR---PDLFTKLILIGAS 120 (264)
Q Consensus 71 ~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~ 120 (264)
...+++...++. ....++.+.|||+||.+|..+|... ..++. ++..+++
T Consensus 106 ~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 106 SVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred HHHHHHHHHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCC
Confidence 344444444443 3446899999999999998877753 23454 5555553
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0024 Score=44.42 Aligned_cols=99 Identities=12% Similarity=0.011 Sum_probs=55.7
Q ss_pred eEEEecCCCCChh--hHHHhhhhc----CCceEEEecCCCC-CCCCCCCCCCcccc-hHHHHHHHHHHHHHH----hCCC
Q 024681 19 ILVLAHGFGTDQS--AWQRILPYL----NHHRVIMFDLVCA-GSVNPDYFDFRRYT-TLDAYVDDLLNILDT----LGVN 86 (264)
Q Consensus 19 ~vv~~hG~~~~~~--~~~~~~~~l----~g~~v~~~d~~g~-G~s~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~ 86 (264)
.||+..|.+.... ....+...| .+-.+..+++|-. |.+... ...|. +..+=++++...++. -...
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~---~~~y~~S~~~G~~~~~~~i~~~~~~CP~t 82 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCG---GISYANSVVNGTNAAAAAINNFHNSCPDT 82 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGT---TCCHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccC---CccccccHHHHHHHHHHHHHHHHhhCCCC
Confidence 4566666554321 112334433 3447888888864 222110 12231 233334444444443 3457
Q ss_pred eEEEEecChhHHHHHHHHH--------------hCC----CccceeEEecCC
Q 024681 87 RCAYVGHSVSAMIGLLASI--------------RRP----DLFTKLILIGAS 120 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~--------------~~p----~~v~~~vl~~~~ 120 (264)
+++|+|+|.|+.++-.++. ..| ++|.++++++-+
T Consensus 83 kivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1qoz_A 83 QLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred cEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCC
Confidence 9999999999999987764 122 468888888864
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0021 Score=47.59 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=23.8
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
.+..+++.....++.+.|||+||.+|..+|..
T Consensus 143 ~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 143 KLDSVIEQYPDYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCceEEEeccChHHHHHHHHHHH
Confidence 34444444445689999999999999887765
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0018 Score=48.16 Aligned_cols=38 Identities=16% Similarity=0.177 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHh----CCCeEEEEecChhHHHHHHHHHh
Q 024681 69 LDAYVDDLLNILDTL----GVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+....+++...++.+ ...++++.|||+||.+|..+|..
T Consensus 115 ~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 115 WNEISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHHHHHHHHHH
Confidence 333444444444433 34689999999999999887764
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.013 Score=40.61 Aligned_cols=95 Identities=13% Similarity=0.073 Sum_probs=53.9
Q ss_pred eEEEecCCCCChh---hHHHhhhh-c---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 19 ILVLAHGFGTDQS---AWQRILPY-L---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 19 ~vv~~hG~~~~~~---~~~~~~~~-l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
.||+..|.+.... ....++.. | .+-..+.+++|-.- . +. . .....+..+.+......-...+++|+
T Consensus 10 ~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~g~~~~~V~YpA~~---~--y~-S-~~G~~~~~~~i~~~~~~CP~tkivl~ 82 (205)
T 2czq_A 10 VLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADF---S--QN-S-AAGTADIIRRINSGLAANPNVCYILQ 82 (205)
T ss_dssp EEEEECCTTCCSSSCTTTHHHHHHHHHHSSSEEEEECCSCCCT---T--CC-C-HHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred EEEEecCCCCCCCCCcccHHHHHHHHHhccCCCceeecccccC---C--Cc-C-HHHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 5666666554331 23344444 4 22244666766321 0 11 0 11233444444444444455799999
Q ss_pred ecChhHHHHHHHHHhC--C----CccceeEEecCC
Q 024681 92 GHSVSAMIGLLASIRR--P----DLFTKLILIGAS 120 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~--p----~~v~~~vl~~~~ 120 (264)
|+|.|+.++-.++... | ++|.++++++-+
T Consensus 83 GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 83 GYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp EETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred eeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 9999999988776554 3 478999999853
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=94.96 E-value=0.027 Score=42.53 Aligned_cols=21 Identities=14% Similarity=0.238 Sum_probs=18.4
Q ss_pred CeEEEEecChhHHHHHHHHHh
Q 024681 86 NRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
.++++.|||+||.+|..+|..
T Consensus 166 ~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 166 AKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp EEEEEEEETHHHHHHHHHHHH
T ss_pred ceEEEecCChHHHHHHHHHHH
Confidence 589999999999999887764
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=93.24 E-value=0.0083 Score=46.19 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhCC--CeEEEEecChhHHHHHHHHHhC
Q 024681 73 VDDLLNILDTLGV--NRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 73 ~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
.+.+..+++.... .++++.|||+||.+|..+|...
T Consensus 213 l~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 213 LREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 3344444444322 4699999999999998877653
|
| >3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B* | Back alignment and structure |
|---|
Probab=91.96 E-value=0.27 Score=34.43 Aligned_cols=52 Identities=12% Similarity=0.159 Sum_probs=37.5
Q ss_pred eEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC----C--eEEEEecChh
Q 024681 44 RVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV----N--RCAYVGHSVS 96 (264)
Q Consensus 44 ~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~l~G~S~G 96 (264)
.-+.+.+-|||++.........++ .++++..+..+.+.++. + ++.|+|.||-
T Consensus 101 gkiRwqlVGHGr~e~n~~~fag~s-adeLa~~L~~f~~~~~~~~~pK~i~IsLvGCsL~ 158 (254)
T 3pa8_A 101 PKIKLTFIGHGKDEFNTDIFAGFD-VDSLSTEIEAAIDLAKEDISPKSIEINLLGCNMF 158 (254)
T ss_dssp SEEEEEEECCCCSSCCSSEETTEE-HHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCC
T ss_pred CceEEEEEecCcCCCCcceeccCC-HHHHHHHHHHHHHHHhhccCCCCceEEEEeeccc
Confidence 446666779999866544556665 99999999999988753 2 3677777764
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A | Back alignment and structure |
|---|
Probab=91.01 E-value=0.6 Score=36.16 Aligned_cols=29 Identities=28% Similarity=0.398 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHH
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLAS 104 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 104 (264)
+.++++..|+++-.++|||+|=..|+.+|
T Consensus 158 l~~ll~~~Gv~P~~v~GHS~GE~aAa~~A 186 (401)
T 4amm_A 158 GIRWLDRLGARPVGALGHSLGELAALSWA 186 (401)
T ss_dssp HHHHHHHHTCCCSEEEECTTHHHHHHHHT
T ss_pred HHHHHHHcCCCCCEEEECCHHHHHHHHHh
Confidence 34667778999999999999999888765
|
| >3ho6_A Toxin A; inositol phosphate, enterotoxin; HET: IHP; 1.60A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=89.35 E-value=0.82 Score=32.55 Aligned_cols=52 Identities=15% Similarity=0.345 Sum_probs=35.8
Q ss_pred EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC----CeE--EEEecChhH
Q 024681 45 VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV----NRC--AYVGHSVSA 97 (264)
Q Consensus 45 v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~l~G~S~Gg 97 (264)
=+.+-+-|||+..........++ .++++.-+..+.+.++. +.+ .|+|.||+.
T Consensus 105 klRWqlVGHGr~e~n~~tlaG~s-a~~LA~~L~~f~~~~~~~~~P~~I~~sLvGCsL~s 162 (267)
T 3ho6_A 105 KVKVTFIGHGKDEFNTSEFARLS-VDSLSNEISSFLDTIKLDISPKNVEVNLLGCNMFS 162 (267)
T ss_dssp EEEEEEECCCCSSCCSSCBTTBC-HHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCCC
T ss_pred ceEEEEEeCCCCCCCccccCCCC-HHHHHHHHHHHHHHhhccCCCCcceeeeEeeecCC
Confidence 34455669999855444456665 99999999988877753 345 777777653
|
| >3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=84.42 E-value=0.74 Score=34.19 Aligned_cols=30 Identities=23% Similarity=0.252 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
+.++++..|+++-.++|||+|=..|+.+|.
T Consensus 72 l~~~l~~~Gi~P~~v~GHSlGE~aAa~~aG 101 (307)
T 3im8_A 72 IYRLLQEKGYQPDMVAGLSLGEYSALVASG 101 (307)
T ss_dssp HHHHHHHTTCCCSEEEESTTHHHHHHHHTT
T ss_pred HHHHHHHcCCCceEEEccCHHHHHHHHHcC
Confidence 345566779999999999999988877653
|
| >2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A | Back alignment and structure |
|---|
Probab=84.37 E-value=1.1 Score=33.30 Aligned_cols=29 Identities=17% Similarity=0.102 Sum_probs=23.5
Q ss_pred HHHHHHh---CCCeEEEEecChhHHHHHHHHH
Q 024681 77 LNILDTL---GVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 77 ~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.++++.. |+++-.++|||+|=..|+.+|.
T Consensus 72 ~~~l~~~~~~Gi~P~~v~GhSlGE~aAa~~aG 103 (303)
T 2qc3_A 72 HQELARRCVLAGKDVIVAGHSVGEIAAYAIAG 103 (303)
T ss_dssp HHHHHHTTTTTTCCEEEEECTTHHHHHHHHTT
T ss_pred HHHHHHhhhcCCCccEEEECCHHHHHHHHHhC
Confidence 4455666 9999999999999998887664
|
| >3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=83.63 E-value=0.82 Score=34.43 Aligned_cols=29 Identities=34% Similarity=0.480 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHH
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLAS 104 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 104 (264)
+.++++..|+++-.++|||+|=..|+.+|
T Consensus 73 l~~ll~~~Gi~P~~v~GHSlGE~aAa~~A 101 (336)
T 3ptw_A 73 ILTALDKLGVKSHISCGLSLGEYSALIHS 101 (336)
T ss_dssp HHHHHHHTTCCCSEEEESTTHHHHHHHHT
T ss_pred HHHHHHHcCCCCCEEEEcCHhHHHHHHHh
Confidence 44566778999999999999999888765
|
| >2qub_A Extracellular lipase; beta roll, alpha/beta hydrolase, helical hairpin, hydrolase; 1.80A {Serratia marcescens} PDB: 2qua_A | Back alignment and structure |
|---|
Probab=83.50 E-value=3.2 Score=33.93 Aligned_cols=40 Identities=13% Similarity=0.231 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHhCCC--eEEEEecChhHHHHHHHHHhCC
Q 024681 69 LDAYVDDLLNILDTLGVN--RCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+..+..++.++.++.++. .|.+-|||+||..+-.+|....
T Consensus 182 ~~~ll~~v~~~a~a~gl~g~dv~vsghslgg~~~n~~a~~~~ 223 (615)
T 2qub_A 182 FGNLLGDVAKFAQAHGLSGEDVVVSGHSLGGLAVNSMAAQSD 223 (615)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEeccccchhhhhHHHHhhc
Confidence 445555666666666664 8999999999999988877543
|
| >2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=83.17 E-value=0.93 Score=33.61 Aligned_cols=29 Identities=17% Similarity=0.095 Sum_probs=23.5
Q ss_pred HHHHHH-hCCCeEEEEecChhHHHHHHHHH
Q 024681 77 LNILDT-LGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 77 ~~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.++++. .|+++-.++|||+|=..|+.+|.
T Consensus 71 ~~~l~~~~Gi~P~~v~GHSlGE~aAa~~AG 100 (305)
T 2cuy_A 71 YRAFLEAGGKPPALAAGHSLGEWTAHVAAG 100 (305)
T ss_dssp HHHHHHTTCCCCSEEEESTHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCcEEEECCHHHHHHHHHhC
Confidence 455666 79999999999999998887653
|
| >3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* | Back alignment and structure |
|---|
Probab=83.01 E-value=1.1 Score=33.34 Aligned_cols=29 Identities=21% Similarity=0.295 Sum_probs=23.1
Q ss_pred HHHHHH-hCCCeEEEEecChhHHHHHHHHH
Q 024681 77 LNILDT-LGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 77 ~~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.++++. .|+++-.++|||+|=..|+.+|.
T Consensus 76 ~~~l~~~~Gi~P~~v~GhSlGE~aAa~~aG 105 (314)
T 3k89_A 76 WRLWTAQRGQRPALLAGHSLGEYTALVAAG 105 (314)
T ss_dssp HHHHHHTTCCEEEEEEESTHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCcEEEECCHHHHHHHHHhC
Confidence 345565 78999999999999998887653
|
| >2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=82.17 E-value=1.3 Score=33.11 Aligned_cols=31 Identities=19% Similarity=0.276 Sum_probs=24.5
Q ss_pred HHHHHHHh---CCCeEEEEecChhHHHHHHHHHh
Q 024681 76 LLNILDTL---GVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 76 ~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+.++++.. |+++-.++|||+|=+.|+.+|..
T Consensus 83 l~~ll~~~~~~Gi~P~~v~GHSlGE~aAa~~AG~ 116 (321)
T 2h1y_A 83 AYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGA 116 (321)
T ss_dssp HHHHHHHHSTTSCCCSEEEECTHHHHHHHHHHTT
T ss_pred HHHHHHHhhhcCCCccEEEEcCHHHHHHHHHcCC
Confidence 34556666 99999999999999998877643
|
| >1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* | Back alignment and structure |
|---|
Probab=82.16 E-value=1.1 Score=33.36 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=23.3
Q ss_pred HHHHHHh-CCCeEEEEecChhHHHHHHHHH
Q 024681 77 LNILDTL-GVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 77 ~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.++++.. |+++-.++|||+|=..|+.+|.
T Consensus 74 ~~~l~~~~Gi~P~~v~GhSlGE~aAa~~aG 103 (309)
T 1mla_A 74 YRVWQQQGGKAPAMMAGHSLGEYSALVCAG 103 (309)
T ss_dssp HHHHHHTTCCCCSEEEESTHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCCEEEECCHHHHHHHHHhC
Confidence 3455666 9999999999999998887654
|
| >3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=80.82 E-value=1.2 Score=34.39 Aligned_cols=29 Identities=24% Similarity=0.219 Sum_probs=23.6
Q ss_pred HHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 77 LNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
..+++..|+++-.++|||+|=..|+.+|.
T Consensus 75 ~~ll~~~Gi~P~av~GHSlGE~aAa~aAG 103 (394)
T 3g87_A 75 YAKCEDSGETPDFLAGHSLGEFNALLAAG 103 (394)
T ss_dssp HHHHHHHCCCCSEEEECTTHHHHHHHHTT
T ss_pred HHHHHHcCCCCceeeecCHHHHHHHHHhC
Confidence 35567779999999999999988887653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 264 | ||||
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 1e-21 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 1e-16 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 2e-16 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 8e-16 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 7e-15 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 9e-15 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 1e-14 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 2e-14 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 3e-14 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 4e-14 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 6e-14 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 1e-13 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 1e-13 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 6e-13 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 8e-13 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 2e-12 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 4e-12 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 7e-12 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 1e-11 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 2e-11 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 4e-11 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 5e-11 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 2e-10 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 3e-10 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 4e-10 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 1e-09 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 3e-09 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 6e-09 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 3e-08 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 6e-07 | |
| d1jmkc_ | 230 | c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillu | 4e-06 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 5e-06 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 3e-05 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 4e-05 | |
| d1r88a_ | 267 | c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tu | 1e-04 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 7e-04 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 0.003 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 0.004 | |
| d2r8ba1 | 203 | c.69.1.14 (A:44-246) Uncharacterized protein Atu24 | 0.004 |
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 88.7 bits (218), Expect = 1e-21
Identities = 45/262 (17%), Positives = 90/262 (34%), Gaps = 15/262 (5%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRY 66
+ + G G+ LVL HG+G + W+ I L +H + + DL G
Sbjct: 2 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLAD 61
Query: 67 TTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND 126
++ ++G S+ ++ ++ P+ L+ + +SP F
Sbjct: 62 MAEAVLQQAP---------DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSAR 112
Query: 127 EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD----VPAAVREFSRTLFNMRPD 182
+++ G + + + A +G + A+++ L D
Sbjct: 113 DEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVD 172
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
+ + + DLR L V +P + + D VP V L + + +
Sbjct: 173 VLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIFAKA 231
Query: 243 GHLPHLSAPAIVGPVIRRALSR 264
H P +S PA ++ R
Sbjct: 232 AHAPFISHPAEFCHLLVALKQR 253
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 75.3 bits (183), Expect = 1e-16
Identities = 45/267 (16%), Positives = 88/267 (32%), Gaps = 14/267 (5%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRR 65
L+ GTG + +VL HGF +W+R L +RVI +D G
Sbjct: 15 LYYEDHGTG-QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFG---QSSQPTTG 70
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL- 124
Y D + + + + + S K+ + + FL
Sbjct: 71 YDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLL 130
Query: 125 -NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFN----- 178
D++ G + D + A++A+ A+ G+ D R + N
Sbjct: 131 KTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTA 190
Query: 179 -MRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237
+ + T + TD R + + VP +I+ + D ++P+ +
Sbjct: 191 ASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYV 250
Query: 238 LLKIEGHLPHLSAPAIVGPVIRRALSR 264
++ H + V + L++
Sbjct: 251 EVEGAPHGLLWTHAEEVNTALLAFLAK 277
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 74.9 bits (182), Expect = 2e-16
Identities = 52/276 (18%), Positives = 87/276 (31%), Gaps = 24/276 (8%)
Query: 8 LHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRR 65
+H VG D ++ HG T W+ I+P++ HR I DL+
Sbjct: 19 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIG----MGKSDKPDL 74
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
D +V L ++ LG+ V H + +G + R P+ + +
Sbjct: 75 DYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPT 134
Query: 126 DEDYHGGFEEAE----IDKVFRAMEANYEAWAYGYAPLAVGADVPAAV------------ 169
+++ E V R + + A+ G P V +
Sbjct: 135 WDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPV 194
Query: 170 -REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR 228
RE N P + L VP ++ + V +P + A L
Sbjct: 195 DREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAE 254
Query: 229 HLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264
L TV++ H P ++G I R L
Sbjct: 255 SLPNCKTVDIGPG-LHYLQEDNPDLIGSEIARWLPG 289
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 72.9 bits (177), Expect = 8e-16
Identities = 44/262 (16%), Positives = 84/262 (32%), Gaps = 13/262 (4%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSA---WQRILPYL-NHHRVIMFDLVCAGSVNPDYFDF 63
G G ++++ HG G + W+ ++P L H+RVI D++
Sbjct: 14 TRYLEAGKGQPVILI-HGGGAGAESEGNWRNVIPILARHYRVIAMDMLG---FGKTAKPD 69
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123
YT I + + VG+S+ GL S+ +L L+L+G++
Sbjct: 70 IEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLV 129
Query: 124 L-NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
+ ED + + + + + A E +
Sbjct: 130 VEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEAT---RKAYVA 186
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
++ + + V+VP +++Q D VPV A + ++
Sbjct: 187 TMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDS-WGYIIPHC 245
Query: 243 GHLPHLSAPAIVGPVIRRALSR 264
GH + P LS
Sbjct: 246 GHWAMIEHPEDFANATLSFLSL 267
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 70.3 bits (170), Expect = 7e-15
Identities = 30/254 (11%), Positives = 66/254 (25%), Gaps = 15/254 (5%)
Query: 21 VLAHGFGTDQSAWQRILPYLNH--HRVIMFDLVCAG-SVNPDYFDFRRYTTLDAYVDDLL 77
VL H W ++ P L H+V DL +G + D Y + LL
Sbjct: 6 VLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQI----EEIGSFDEYSEPLL 61
Query: 78 NILDTLGVNRCAYV-GHSVSAMIGLLASIRRPDLFTKLILIGAS------PRFLNDEDYH 130
L+ L + G S + +A+ + + + + +
Sbjct: 62 TFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLM 121
Query: 131 GGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKT 190
F + + F + E + ++ L M
Sbjct: 122 EVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNI 181
Query: 191 VFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSA 250
+ G + + + T +D + + ++ H L+
Sbjct: 182 LAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGG-DHKLQLTK 240
Query: 251 PAIVGPVIRRALSR 264
+ +++
Sbjct: 241 TKEIAEILQEVADT 254
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 69.9 bits (169), Expect = 9e-15
Identities = 40/264 (15%), Positives = 81/264 (30%), Gaps = 10/264 (3%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRR 65
++ + G+G + ++ +HG+ D W+ + YL +R I FD D
Sbjct: 11 IYFKDWGSG-KPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRG--FGRSDQPWTGN 67
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
A L L + +A + ++L +P F
Sbjct: 68 DYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127
Query: 126 DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLF-----NMR 180
DY G + + + + + G + V + +T
Sbjct: 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLAS 187
Query: 181 PDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240
++ +TD R + + VP ++I D VP + L +++ K
Sbjct: 188 LKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYK 247
Query: 241 IEGHLPHLSAPAIVGPVIRRALSR 264
H ++ + + L R
Sbjct: 248 DAPHGFAVTHAQQLNEDLLAFLKR 271
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 69.6 bits (168), Expect = 1e-14
Identities = 45/271 (16%), Positives = 88/271 (32%), Gaps = 20/271 (7%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRR 65
L+ G+G + +VL HG+ D +W+R L +RVI +D G
Sbjct: 15 LYYEDQGSG-QPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFG----GSSKVNT 69
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLI--LIGASPRF 123
D + DL +L+TL + VG S+ R + L P
Sbjct: 70 GYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFL 129
Query: 124 LNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNM---- 179
+ +D G + D + A + + AW + D R + +
Sbjct: 130 VQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVA 189
Query: 180 -----RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV-SVAEYLQRHLGGR 233
++ + + P +I+ +KD +P+ + A + +
Sbjct: 190 IGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEA 249
Query: 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264
++ H + V ++ L++
Sbjct: 250 -DYVEVEGAPHGLLWTHADEVNAALKTFLAK 279
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 68.8 bits (166), Expect = 2e-14
Identities = 38/263 (14%), Positives = 81/263 (30%), Gaps = 10/263 (3%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRR 65
++ + G+G + +V +HG+ + +W+ + +L +RVI D G + +
Sbjct: 11 IYYKDWGSG-QPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDM 69
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
T D + ++ V G A R LI
Sbjct: 70 DTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAG-LISAVPPLMLKT 128
Query: 126 DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP------AAVREFSRTLFNM 179
+ + G E ++ + + + G + P V F
Sbjct: 129 EANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAA 188
Query: 180 RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELL 239
+ K +TD L + VP +++ D VP+ + L +T+++
Sbjct: 189 GHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIY 248
Query: 240 KIEGHLPHLSAPAIVGPVIRRAL 262
H + + + +
Sbjct: 249 SGAPHGLTDTHKDQLNADLLAFI 271
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 68.7 bits (166), Expect = 3e-14
Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 14/264 (5%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-----NHHRVIMFDLVCAGSVNPDYFD 62
+H G G+ +++ HG G W + +RVI+ D + D
Sbjct: 22 IHYNEAGNGE-TVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMD 80
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
+R V L++ LD + +A+ ++ PD KLIL+G
Sbjct: 81 EQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALN---FALEYPDRIGKLILMGPGGL 137
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYE----AWAYGYAPLAVGADVPAAVREFSRTLFN 178
+ + K++ L + R +
Sbjct: 138 GPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEH 197
Query: 179 MRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238
++ + + D+ LG ++ I D VP+ L ++ + +
Sbjct: 198 LKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDD-ARLHV 256
Query: 239 LKIEGHLPHLSAPAIVGPVIRRAL 262
GH ++ L
Sbjct: 257 FSKCGHWAQWEHADEFNRLVIDFL 280
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 68.3 bits (165), Expect = 4e-14
Identities = 46/262 (17%), Positives = 99/262 (37%), Gaps = 13/262 (4%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSA---WQRILPYL-NHHRVIMFDLVCAGSVNPDYFDF 63
+ VG G + +L HG G SA W+ +P L +RVI D+V G
Sbjct: 15 TNYHDVGEGQPV-ILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFG---FTDRPE 70
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123
+ D++VD ++ I+D L + + VG++ + + ++R + +++L+GA+
Sbjct: 71 NYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTR 130
Query: 124 LNDEDYHGGF--EEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRP 181
+ + I+ + ++ + LA + F + +M P
Sbjct: 131 FDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFP 190
Query: 182 DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241
+ + +D + + +II +D VP+S + L + + +
Sbjct: 191 EPRQRWIDALASSDED--IKTLPNETLIIHGREDQVVPLSSSLRLGELIDR-AQLHVFGR 247
Query: 242 EGHLPHLSAPAIVGPVIRRALS 263
GH + ++ +
Sbjct: 248 CGHWTQIEQTDRFNRLVVEFFN 269
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 67.6 bits (163), Expect = 6e-14
Identities = 39/255 (15%), Positives = 73/255 (28%), Gaps = 13/255 (5%)
Query: 20 LVLAHGFGTDQSAWQRILPYLN--HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL 77
VL HG +W ++ P L H+V DL +G T D + +
Sbjct: 5 FVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASG--TDLRKIEELRTLYDYTLPLME 62
Query: 78 NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAE 137
+ + VGHS+ M LA + P + + A + E
Sbjct: 63 LMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNE 122
Query: 138 IDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREF--------SRTLFNMRPDISLFVSK 189
++ + + PL P + L + S +
Sbjct: 123 RTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFME 182
Query: 190 TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS 249
+ V V I ++D +P + ++G +E+ H+ L
Sbjct: 183 DLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGA-DHMAMLC 241
Query: 250 APAIVGPVIRRALSR 264
P + + +
Sbjct: 242 EPQKLCASLLEIAHK 256
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 67.6 bits (163), Expect = 1e-13
Identities = 39/277 (14%), Positives = 76/277 (27%), Gaps = 25/277 (9%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRY 66
+ GTGD ++ HG T W+ I+P+ R+I DL+ G +
Sbjct: 20 MAYIDEGTGD-PILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPER 78
Query: 67 TTLDAYVDDLLNILDTLGVNRCA-YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
+ D L + + L + V H + +G + R + + + A +
Sbjct: 79 YAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIE 138
Query: 126 DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA-----------------DVPAA 168
D+ + +A E + G
Sbjct: 139 WADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGE 198
Query: 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR 228
R + + P D G L +P + I + ++ +
Sbjct: 199 ARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRT 258
Query: 229 HLGGRNTVELLKIE-GHLPHLSAPAIVGPVIRRALSR 264
+ + H +P +G I + R
Sbjct: 259 WPN----QTEITVAGAHFIQEDSPDEIGAAIAAFVRR 291
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 67.1 bits (162), Expect = 1e-13
Identities = 48/289 (16%), Positives = 88/289 (30%), Gaps = 42/289 (14%)
Query: 8 LHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRR 65
L+ G + +V+ HG + + +R+++FD +G P
Sbjct: 24 LYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDN 83
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
T V D+ + LGV+R G S + + L + P T+L+L G
Sbjct: 84 TT--WDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRF 141
Query: 126 D--------------EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171
+ + + + M A + + A +V E
Sbjct: 142 ELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWE 201
Query: 172 FSRTLFNMRPDISLFVSKTVF---------------------DTDLRGILGLVRVPCVII 210
+ + ++ D F D LR + +P VI+
Sbjct: 202 GATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPGVIV 261
Query: 211 QTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIR 259
DV P+ A L + +++ GH P V ++R
Sbjct: 262 HGRYDVVCPLQSAWDLHKAWPK-AQLQISPASGHSAF--EPENVDALVR 307
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 65.0 bits (156), Expect = 6e-13
Identities = 39/266 (14%), Positives = 73/266 (27%), Gaps = 14/266 (5%)
Query: 8 LHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFR 64
+ + G D +V HG+ W + + + +RVI D
Sbjct: 11 IFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRG---HGRSDQPST 67
Query: 65 RYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124
+ D + + + P K +L+ A P +
Sbjct: 68 GHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVM 127
Query: 125 NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV--------GADVPAAVREFSRTL 176
D + E+ FRA A A Y P + +
Sbjct: 128 VKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQG 187
Query: 177 FNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236
+ +TD L + VP ++ + D VP + A L T+
Sbjct: 188 MMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATL 247
Query: 237 ELLKIEGHLPHLSAPAIVGPVIRRAL 262
+ + H + P ++ P + +
Sbjct: 248 KSYEGLPHGMLSTHPEVLNPDLLAFV 273
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.9 bits (156), Expect = 8e-13
Identities = 36/298 (12%), Positives = 98/298 (32%), Gaps = 48/298 (16%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRR 65
LH +G+G + L HGF +W+ +P L +RV+ D+
Sbjct: 24 LHFVELGSGP-AVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKG--YGESSAPPEIE 80
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS----- 120
++ +++ LD LG+++ ++GH M+ ++ P+ + +
Sbjct: 81 EYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPAN 140
Query: 121 --------------------------PRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAY 154
+++ F+ + + A
Sbjct: 141 PNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAG 200
Query: 155 GY----------APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVR 204
G + + ++ V++F ++ F + + + + + +
Sbjct: 201 GLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKW-ACKSLGRKIL 259
Query: 205 VPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRAL 262
+P +++ KD + ++++++ + + GH + P V ++ + L
Sbjct: 260 IPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDC-GHWTQMDKPTEVNQILIKWL 316
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 63.8 bits (153), Expect = 2e-12
Identities = 46/274 (16%), Positives = 80/274 (29%), Gaps = 20/274 (7%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRY 66
+H G G L+L HG+ W +++ L H+ VI+ DL G +
Sbjct: 20 IHYVREGAG-PTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSK 78
Query: 67 TTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND 126
+LD DD +LD LG+ + VGH +A++ + D K +
Sbjct: 79 YSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGP 138
Query: 127 EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTL---------- 176
+ G F ++ E + L
Sbjct: 139 VYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHV 198
Query: 177 --------FNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR 228
+ + + + +P +I D VP +
Sbjct: 199 DNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVP 258
Query: 229 HLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRAL 262
T+E ++ GH + P I I+ A
Sbjct: 259 KYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 292
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 62.6 bits (150), Expect = 4e-12
Identities = 40/269 (14%), Positives = 76/269 (28%), Gaps = 17/269 (6%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRR 65
+ + G G R +V HG+ + AWQ L + +R I D +
Sbjct: 11 IFYKDWGQG-RPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRG----HGHSTPVWD 65
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFL 124
D + DDL ++L L + V HS+ R +L+ A P +
Sbjct: 66 GYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVM 125
Query: 125 NDEDYHGGFEEAEIDKVFRAMEA-------NYEAWAYGYAPLAVGADVPAAVREFSRTLF 177
D + E+ + A + A F
Sbjct: 126 IKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAM 185
Query: 178 NMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237
+ + TD L +P +++ D VP+ + ++
Sbjct: 186 AQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELK 245
Query: 238 LLKIEGHLPHLSA--PAIVGPVIRRALSR 264
+ + H + + L++
Sbjct: 246 VYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 61.9 bits (148), Expect = 7e-12
Identities = 35/282 (12%), Positives = 81/282 (28%), Gaps = 32/282 (11%)
Query: 8 LHVRVVGTGD--RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDF 63
++ ++ + L+ HG + L + V+ +D G
Sbjct: 14 IYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSK 73
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP-- 121
+ G + +G S + L +++ D LI+ G
Sbjct: 74 FTIDYGVEEAEA--LRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV 131
Query: 122 -------------------RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162
+ G +E E + + + + P +
Sbjct: 132 PLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLK 191
Query: 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV 222
+ A R R M ++ T+ D D+ + +++P +I D P +V
Sbjct: 192 SLEYAERRNVYRI---MNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NV 247
Query: 223 AEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264
A + + G + + + + HL ++ + +
Sbjct: 248 ARVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKLLSDFILK 288
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 61.1 bits (146), Expect = 1e-11
Identities = 51/266 (19%), Positives = 92/266 (34%), Gaps = 11/266 (4%)
Query: 7 ALHVRVVGTGDR-ILVLAHGFGTDQSA---WQRILPYL-NHHRVIMFDLV-CAGSVNPDY 60
A H V G +VL HG G A W+ I+P L + V+ DL+ S P+
Sbjct: 15 ASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPET 74
Query: 61 FDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120
+ + + V+ +L +++ G+ + VG+S+ + L + P+ F K+ L+G+
Sbjct: 75 YPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSV 134
Query: 121 PRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMR 180
+N A G + R +R
Sbjct: 135 GAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVR 194
Query: 181 PDISLFVSKTVFD----TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236
+ LG + ++ +D VP+ + YL +HL +
Sbjct: 195 RIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKH-AEL 253
Query: 237 ELLKIEGHLPHLSAPAIVGPVIRRAL 262
+L GH L +GP++
Sbjct: 254 VVLDRCGHWAQLERWDAMGPMLMEHF 279
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 60.3 bits (144), Expect = 2e-11
Identities = 32/267 (11%), Positives = 72/267 (26%), Gaps = 22/267 (8%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRR 65
LH ++VL HG + WQ +L +L + DL +
Sbjct: 7 LHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPG---HGTNPERHCD 63
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTK--LILIGASPRF 123
+ + VG+S+ + + + +I
Sbjct: 64 NFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFG 123
Query: 124 LNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDI 183
L + + + + R + E + AV + + R+ +
Sbjct: 124 LQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGS 183
Query: 184 ----SLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELL 239
L + L L +++P + +D + L + +
Sbjct: 184 SVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF---------QQLAESSGLSYS 234
Query: 240 KIE--GHLPHLSAPAIVGPVIRRALSR 264
++ GH H P +++ +
Sbjct: 235 QVAQAGHNVHHEQPQAFAKIVQAMIHS 261
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 59.9 bits (143), Expect = 4e-11
Identities = 36/272 (13%), Positives = 74/272 (27%), Gaps = 17/272 (6%)
Query: 8 LHVRVVGTGD--RILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRR 65
H G D + + HG T +++++P + G D
Sbjct: 36 AHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEE 95
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS----- 120
T + + + LL +++ L + V +GL + P F +LI++ A
Sbjct: 96 DYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDP 155
Query: 121 ---PRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLF 177
P F A + + + + +AP A+ A F T +
Sbjct: 156 VTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSY 215
Query: 178 NMRPDI-------SLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230
+ + + KD + V ++ +
Sbjct: 216 QAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALI 275
Query: 231 GGRNTVELLKIEGHLPHLSAPAIVGPVIRRAL 262
G + GH + ++
Sbjct: 276 NGCPEPLEIADAGHFVQEFGEQVAREALKHFA 307
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 59.5 bits (142), Expect = 5e-11
Identities = 35/288 (12%), Positives = 83/288 (28%), Gaps = 41/288 (14%)
Query: 8 LHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRR 65
++ + G + + V HG + + ++V++FD G
Sbjct: 24 IYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQR--GCGRSRPHASLD 81
Query: 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN 125
T V D+ + + GV + G S + + L + P+ ++++L G
Sbjct: 82 NNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQ 141
Query: 126 DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISL 185
++ + + + +A + + +
Sbjct: 142 RLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWE 201
Query: 186 FVSKTVF----------------------------------DTDLRGILGLVRVPCVIIQ 211
+ T+ D LR + + +P VI+
Sbjct: 202 GETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVH 261
Query: 212 TSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIR 259
D++ V A L + + +++ GH P I+ ++
Sbjct: 262 GRYDMACQVQNAWDLAKAWPE-AELHIVEGAGH--SYDEPGILHQLMI 306
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 57.5 bits (138), Expect = 2e-10
Identities = 29/186 (15%), Positives = 55/186 (29%), Gaps = 20/186 (10%)
Query: 20 LVLAHGFGTDQSA------WQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDA 71
++L HG W I L + +V + +L S D +
Sbjct: 11 VILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQS------DDGPNGRGEQ 64
Query: 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG 131
+ + +L G + +GHS + + P L + IG R D+
Sbjct: 65 LLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGSEFADFVQ 124
Query: 132 GFEEAEIDKVFRAMEANYEAW--AYGYAPLAVGADVPAAVREFSRT---LFNMR-PDISL 185
+ + + + A + + D AA+R + +N P L
Sbjct: 125 DVLKTDPTGLSSTVIAAFVNVFGTLVSSSHNTDQDALAALRTLTTAQTATYNRNFPSAGL 184
Query: 186 FVSKTV 191
+
Sbjct: 185 GAPGSC 190
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 57.2 bits (137), Expect = 3e-10
Identities = 36/249 (14%), Positives = 68/249 (27%), Gaps = 30/249 (12%)
Query: 2 GDLLEALHVRVVGTGDR---ILVLAHGFGTDQSAWQRILPYLNHH--RVIMFDLVCAGSV 56
G L +++A GF + + YL+ + V +D + +
Sbjct: 14 GQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGL 73
Query: 57 NPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLIL 116
+ D TT + + + L T G + S+SA + F +
Sbjct: 74 SSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSFLITAV 133
Query: 117 IGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTL 176
+ R ++ + ID++ + G+ F R
Sbjct: 134 GVVNLRDTLEKALGFDYLSLPIDELPNDL------DFEGHKLG---------SEVFVRDC 178
Query: 177 FNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL-GGRNT 235
F D V + VP + + D V + H+ G
Sbjct: 179 FEHHWDTLDSTLDKVAN---------TSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCK 229
Query: 236 VELLKIEGH 244
+ L H
Sbjct: 230 LYSLLGSSH 238
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 56.8 bits (135), Expect = 4e-10
Identities = 48/286 (16%), Positives = 79/286 (27%), Gaps = 31/286 (10%)
Query: 8 LHVRVVGTGDR-ILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDF 63
L G L+L G W VI +D G +
Sbjct: 12 LWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTG-RSTTRDFA 70
Query: 64 RRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123
D + +LD GV+R VG S+ A I + ++ D + L ++
Sbjct: 71 AHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLD 130
Query: 124 LNDEDY--HGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTL----- 176
++ + E +D + + +A A P A A R L
Sbjct: 131 IDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGV 190
Query: 177 ------------------FNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSV 218
+ + S T+ L V VP ++IQ D
Sbjct: 191 PFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIA 250
Query: 219 PVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264
P ++L + + + GH S + VI
Sbjct: 251 PAPHGKHLAGLIPTA-RLAEIPGMGHALPSSVHGPLAEVILAHTRS 295
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 55.6 bits (133), Expect = 1e-09
Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 24/168 (14%)
Query: 20 LVLAHGFG-----TDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAY 72
+VLAHG W I L + +V + ++ + +
Sbjct: 10 IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRG---------EQL 60
Query: 73 VDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDY--- 129
+ + I+ G + +GHS + RPDL +GA + + D+
Sbjct: 61 LQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTADFLRQ 120
Query: 130 --HGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRT 175
G EA + + ++ A + G + ++ +
Sbjct: 121 IPPGSAGEAVLSGLVNSLGALISFLSSGS---TGTQNSLGSLESLNSE 165
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.9 bits (128), Expect = 3e-09
Identities = 27/271 (9%), Positives = 66/271 (24%), Gaps = 34/271 (12%)
Query: 20 LVLAHGFGTDQSAWQRILPYL----NHHRVIMFDLVCAG-SVNPDYFDFRRYTTLDAYVD 74
+++ HG +++ +L Y+ V + DL S+ P + + + +
Sbjct: 5 VIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWE------QVQGFRE 58
Query: 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP------------R 122
++ I+ + +S ++ D + +SP
Sbjct: 59 AVVPIMAKAP-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKW 117
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTL--FNMR 180
+ NY + + A + R
Sbjct: 118 LFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWR 177
Query: 181 PDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT----- 235
+ + G++ + + + + + R G T
Sbjct: 178 KNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARG 237
Query: 236 -VELLKIE--GHLPHLSAPAIVGPVIRRALS 263
+ + H S + I LS
Sbjct: 238 AIVRCPMAGISHTAWHSNRTLYETCIEPWLS 268
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 53.0 bits (125), Expect = 6e-09
Identities = 26/240 (10%), Positives = 59/240 (24%), Gaps = 26/240 (10%)
Query: 16 GDRILVLAHGFGTDQSAWQRILPYLNHH--RVIMFDLVCAGSVNPDYFDFRRYTTLDAYV 73
G+R ++L HGF + + + + +L G +
Sbjct: 10 GERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDV- 68
Query: 74 DDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGF 133
+ L G + A G S+ + L P + +
Sbjct: 69 MNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKS------EETM 122
Query: 134 EEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFD 193
E ++ + ++ + P + + L D
Sbjct: 123 YEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDL------- 175
Query: 194 TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN-TVELLKIEGHLPHLSAPA 252
+ P ++Q D + A + + ++ + GH+ L
Sbjct: 176 ---------IYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEK 226
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 51.6 bits (122), Expect = 3e-08
Identities = 41/316 (12%), Positives = 72/316 (22%), Gaps = 71/316 (22%)
Query: 19 ILVLAHGFGTDQSAWQRILPYL--------NHHRVIMFDLVCAG------SVNPDYFDFR 64
+ L HG + W LP + V + + +PD +F
Sbjct: 60 VAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFW 119
Query: 65 RYT----TLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI--G 118
++ + IL G ++ YVGHS IG +A P L ++
Sbjct: 120 AFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYAL 179
Query: 119 ASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEA--------------------------- 151
A + + +F+ + N
Sbjct: 180 APVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNA 239
Query: 152 ------------------WAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVS---KT 190
+ P + ++ D V
Sbjct: 240 LFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHY 299
Query: 191 VFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL-- 248
L + VP + D+ + L L + HL +
Sbjct: 300 HQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWA 359
Query: 249 -SAPAIVGPVIRRALS 263
AP V I +
Sbjct: 360 MDAPQAVYNEIVSMMG 375
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 46.6 bits (109), Expect = 6e-07
Identities = 23/181 (12%), Positives = 48/181 (26%), Gaps = 17/181 (9%)
Query: 7 ALHVRVVGTGDR---ILVLAHGFGTDQSAWQRILPYLN-HHRVIMFDLVCAGSVNPDYF- 61
A R++G G L L HG G D++ + + ++ +F
Sbjct: 10 AFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFE 69
Query: 62 ----DFRRYTTLDAYVDDLLNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLF 111
++ A + ++ ++G+S A + + P +
Sbjct: 70 RIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIV 129
Query: 112 TKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171
L+ P + D + A + Y + L R
Sbjct: 130 RLAALL--RPMPVLDHVPATDLAGIRTLIIAGAADETYGPFVPALVTLLSRHGAEVDARI 187
Query: 172 F 172
Sbjct: 188 I 188
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Score = 44.3 bits (103), Expect = 4e-06
Identities = 24/265 (9%), Positives = 69/265 (26%), Gaps = 43/265 (16%)
Query: 3 DLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFD 62
D L+ + + +I+ +Q + L +++ FD + Y D
Sbjct: 4 DGLQDVTIMNQDQE-QIIFAFPPVLGYGLMYQNLSSRLPSYKLCAFDFIEEEDRLDRYAD 62
Query: 63 FRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122
+ G+S + A+ + G +
Sbjct: 63 LIQ---------------KLQPEGPLTLFGYSAGCSLAFEAAKKLEGQ-------GRIVQ 100
Query: 123 FLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPD 182
+ D + +++D + V +++ + ++ +
Sbjct: 101 RIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVN 160
Query: 183 ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242
+ + ++ + D +P +A + + G + +
Sbjct: 161 LISTGQV--------------KADIDLLTSGADFDIPEWLASWEEATTGA---YRMKRGF 203
Query: 243 G-HLPHLSAPAI--VGPVIRRALSR 264
G H L + ++ L+
Sbjct: 204 GTHAEMLQGETLDRNAGILLEFLNT 228
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (103), Expect = 5e-06
Identities = 36/284 (12%), Positives = 72/284 (25%), Gaps = 41/284 (14%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYT 67
+ + V + +R L L H + + + L+
Sbjct: 16 MRLNSVQSSERPLFLVHPIEGSTTVFHSLASRLS-IPTYGLQCT----------RAAPLD 64
Query: 68 TLDAYVDDLL-NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND 126
++ + + I G+S A + + + + F
Sbjct: 65 SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 124
Query: 127 EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLF 186
Y + ++ K+ EA E A + V E L + ++
Sbjct: 125 PTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAA 184
Query: 187 VSKT-----------------VFDTDLRGILGL-------VRVPCVIIQTSKDVSVPVSV 222
V F LR V + +T +
Sbjct: 185 VDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPKAKYYGNVMLLRAKTGGAYGEDLGA 244
Query: 223 AEYLQRHLGGRNTVELLKIEG-HLPHLSAPAI--VGPVIRRALS 263
L + G+ V + IEG H L + + +I +L+
Sbjct: 245 DYNLSQVCDGK--VSVHVIEGDHRTLLEGSGLESIISIIHSSLA 286
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 41.4 bits (96), Expect = 3e-05
Identities = 17/104 (16%), Positives = 28/104 (26%), Gaps = 9/104 (8%)
Query: 20 LVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL 77
+V+ HG G + I YL V Y +
Sbjct: 5 VVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVD-----FWDKTGTNYNNGPVLSRFVQ 59
Query: 78 NILDTLGVNRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGA 119
+LD G + V HS+ L + ++ +G
Sbjct: 60 KVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGG 103
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 40.1 bits (93), Expect = 4e-05
Identities = 11/95 (11%), Positives = 24/95 (25%), Gaps = 14/95 (14%)
Query: 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAG-SVNPDYFDFRRY 66
L VG G +L++A + + + DL G + P
Sbjct: 13 LVFDRVGKGPPVLLVAEEA------SRWPEALPEGYAFYLLDLPGYGRTEGPRMAPEELA 66
Query: 67 TTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL 101
+ + + + + +G
Sbjct: 67 -------HFVAGFAVMMNLGAPWVLLRGLGLALGP 94
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 39.9 bits (92), Expect = 1e-04
Identities = 20/114 (17%), Positives = 33/114 (28%), Gaps = 11/114 (9%)
Query: 8 LHVRVVGTGDRILVLAHGF--GTDQSAWQRILPYLNHHR-----VIMFDLVCAGSVNPDY 60
+ V + G + L F G D S W +N V+ A S+ ++
Sbjct: 18 IPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPA-GGAYSMYTNW 76
Query: 61 FDFRRYTTLDAYVDDLLNILDTLGV---NRCAYVGHSVSAMIGLLASIRRPDLF 111
+L + L A VG + + + PD F
Sbjct: 77 EQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRF 130
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 38.0 bits (87), Expect = 7e-04
Identities = 32/232 (13%), Positives = 63/232 (27%), Gaps = 42/232 (18%)
Query: 19 ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDL 76
+++ G + + ++ + FD G + Y + V DL
Sbjct: 133 AVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDL 192
Query: 77 LNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEA 136
L L+ + + +G S+ L ++ P I G
Sbjct: 193 LTKLEAIRNDAIGVLGRSLGGNYALKSAACEPR-LAACISWGGFS--------------- 236
Query: 137 EIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDL 196
D + +E ++ Y D R R
Sbjct: 237 --DLDYWDLETPLTKESWKYVS---KVDTLEEARLHVHAALETR---------------- 275
Query: 197 RGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN-TVELLKIEGHLPH 247
+L + P I+ D VP+S + + + + + + K H H
Sbjct: 276 -DVLSQIACPTYILHGVHD-EVPLSFVDTVLELVPAEHLNLVVEKDGDHCCH 325
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.8 bits (81), Expect = 0.003
Identities = 19/129 (14%), Positives = 32/129 (24%), Gaps = 6/129 (4%)
Query: 8 LHVRVVGTGD----RILVLAHGFGTDQSAWQR--ILPYLNHHRVIMFDLVCAGSVNPDYF 61
L R G ++L HG WQ L L + G +
Sbjct: 18 LFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEA 77
Query: 62 DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121
A L ++D L + + S+S M L + +
Sbjct: 78 AAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPIC 137
Query: 122 RFLNDEDYH 130
+ +
Sbjct: 138 TDKINAANY 146
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 35.5 bits (81), Expect = 0.004
Identities = 13/115 (11%), Positives = 32/115 (27%), Gaps = 14/115 (12%)
Query: 15 TGDRILVLAHGFGTD--QSAWQRILPYLNH--HRVIMFDLVCAGSVNPDYFDFRRYTTLD 70
+ + ++L G GT QS +P + + +
Sbjct: 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND-------TQVNTE 81
Query: 71 AYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLF---TKLILIGASPR 122
V+ + + G N+ + S ++ P + +L+ +
Sbjct: 82 YMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} Length = 203 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 35.1 bits (79), Expect = 0.004
Identities = 21/134 (15%), Positives = 36/134 (26%), Gaps = 11/134 (8%)
Query: 8 LHVRVVGTGDR-ILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRR 65
H G + VL HG G D++ + L ++ + +F
Sbjct: 7 FHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTG 66
Query: 66 YT---------TLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLIL 116
D + + +G S A I I +P+LF +L
Sbjct: 67 EGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVL 126
Query: 117 IGASPRFLNDEDYH 130
+ F
Sbjct: 127 MHPLIPFEPKISPA 140
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 264 | |||
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 100.0 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 100.0 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 100.0 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.98 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.97 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.97 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.96 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.96 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.95 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.95 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.94 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.94 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.94 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.94 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.94 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.93 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.93 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.92 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.91 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.91 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.9 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.9 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.89 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.89 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.89 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.87 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.87 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.87 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.86 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.85 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.84 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.82 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.81 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.81 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.81 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.81 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.78 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.75 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.69 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.65 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.64 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.62 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.61 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.53 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.52 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.52 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.42 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.42 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.4 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.35 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.31 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.3 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.25 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.21 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.21 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.16 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.11 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.08 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.03 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 99.02 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.98 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.89 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.84 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.83 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.95 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.92 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.91 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 97.83 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.82 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 97.69 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 97.61 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 97.59 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 97.56 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 97.41 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 97.2 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 97.03 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 97.03 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.98 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.96 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.93 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 96.12 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 96.05 |
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.6e-42 Score=253.11 Aligned_cols=246 Identities=19% Similarity=0.288 Sum_probs=175.3
Q ss_pred eEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC
Q 024681 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 8 ~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (264)
++|+..|+++|+|||+||++++...|..+++.| ++|+|+++|+||||.|+.. ..+ ++.+ +.+.+..+..+
T Consensus 2 i~y~~~G~g~~~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~----~~~-~~~d----~~~~~~~~~~~ 72 (256)
T d1m33a_ 2 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGF----GAL-SLAD----MAEAVLQQAPD 72 (256)
T ss_dssp CCEEEECCCSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSC----CCC-CHHH----HHHHHHTTSCS
T ss_pred eEEEEECCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEeCCCCCCcccc----ccc-cccc----ccccccccccc
Confidence 789999999889999999999999999999999 9999999999999999754 222 2444 33444556678
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc-ccccCCCCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY-APLAVGADV 165 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 165 (264)
+++++||||||.+++.+|.++|+++++++++++.+.......+. ........................+ .........
T Consensus 73 ~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (256)
T d1m33a_ 73 KAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWP-GIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTET 151 (256)
T ss_dssp SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBC-SBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTT
T ss_pred ceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhh-hhHHHHHHHHHhhhhhhhHHHHHHHhhhhhccccc
Confidence 99999999999999999999999999999999876554333332 2222222222222222222222211 111222222
Q ss_pred hH-HHHHHHHhhcc---cCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecC
Q 024681 166 PA-AVREFSRTLFN---MRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241 (264)
Q Consensus 166 ~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (264)
.. ........... ................+..+.++++++|+++|+|++|.++|++..+.+.+.+++ ++++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~~-~~~~~i~~ 230 (256)
T d1m33a_ 152 ARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIFAK 230 (256)
T ss_dssp HHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTT-CEEEEETT
T ss_pred hhhHHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHHHHCCC-CEEEEECC
Confidence 22 22222222221 222233333344445566777889999999999999999999999999999998 89999999
Q ss_pred CCCcccccChhcHHHHHHHHhcC
Q 024681 242 EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 242 ~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+||++++|+|+++++.|.+||++
T Consensus 231 ~gH~~~~e~p~~~~~~l~~fl~~ 253 (256)
T d1m33a_ 231 AAHAPFISHPAEFCHLLVALKQR 253 (256)
T ss_dssp CCSCHHHHSHHHHHHHHHHHHTT
T ss_pred CCCchHHHCHHHHHHHHHHHHHH
Confidence 99999999999999999999975
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=9.6e-42 Score=252.42 Aligned_cols=248 Identities=15% Similarity=0.185 Sum_probs=173.3
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhh----hc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILP----YL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~----~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
+|+|++.|++ |+|||+||++.+...|..+.+ .+ +||+|+++|+||||.|.... ...+ +....++|+.++++
T Consensus 21 ~i~y~~~G~G-~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~--~~~~-~~~~~~~~i~~li~ 96 (283)
T d2rhwa1 21 NIHYNEAGNG-ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVV--MDEQ-RGLVNARAVKGLMD 96 (283)
T ss_dssp EEEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCC--CSSC-HHHHHHHHHHHHHH
T ss_pred EEEEEEEcCC-CeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCccccccc--cccc-ccchhhhhcccccc
Confidence 6889999987 689999999999988876554 34 89999999999999997642 1223 47778999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh----hhhhhhhcc
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN----YEAWAYGYA 157 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 157 (264)
+++.++++++||||||.+++.+|.++|++|+++|++++......... ................. .......+.
T Consensus 97 ~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (283)
T d2rhwa1 97 ALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFA---PMPMEGIKLLFKLYAEPSYETLKQMLQVFL 173 (283)
T ss_dssp HHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSS---CSSCHHHHHHHHHHHSCCHHHHHHHHHHHC
T ss_pred cccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhh---hhhHHHHHHHHHHhhhhhhhhHHHHHHHhh
Confidence 99999999999999999999999999999999999998643322111 11112222222221111 111111111
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhh-----hhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLF-----VSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG 232 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 232 (264)
... ....++............ +..... ........+....+.++++|+++++|++|.++|++..+.+.+.+++
T Consensus 174 ~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 251 (283)
T d2rhwa1 174 YDQ-SLITEELLQGRWEAIQRQ-PEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDD 251 (283)
T ss_dssp SCG-GGCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSS
T ss_pred ccc-ccCcHHHHHHHHHHhhhh-hhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHhCCC
Confidence 110 011112222222211111 111111 1111223455667788999999999999999999999999999998
Q ss_pred CceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 233 RNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++++.|.+||++
T Consensus 252 -~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 252 -ARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp -EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred -CEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999974
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=2.4e-41 Score=251.94 Aligned_cols=256 Identities=18% Similarity=0.153 Sum_probs=176.4
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHH-Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQ-RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~-~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+++|++.|+ ++|+|||+||++.+...|. .+.+.| +||+|+++|+||||.|+........|+ ++++++|+.++++
T Consensus 10 ~~i~y~~~G~~~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~-~~~~~~d~~~ll~ 88 (297)
T d1q0ra_ 10 VELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYG-FGELAADAVAVLD 88 (297)
T ss_dssp EEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCC-HHHHHHHHHHHHH
T ss_pred EEEEEEEecCCCCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccc-cchhhhhhccccc
Confidence 3699999997 5689999999999999885 466776 899999999999999976544445565 9999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCC-------------CCCCCCCccHHHHHHHHHHHHh-
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN-------------DEDYHGGFEEAEIDKVFRAMEA- 147 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~- 147 (264)
+++.++++++||||||.+++.+|.++|++|+++|++++...... ...............+......
T Consensus 89 ~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (297)
T d1q0ra_ 89 GWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPA 168 (297)
T ss_dssp HTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCC
T ss_pred cccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhhhHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999988643211 0000111111111111110000
Q ss_pred -----hhhhh-hh-hcccccCCCCChHHHHHHHH----hhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCC
Q 024681 148 -----NYEAW-AY-GYAPLAVGADVPAAVREFSR----TLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDV 216 (264)
Q Consensus 148 -----~~~~~-~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~ 216 (264)
..... .. .................... ....................+....++++++|+++|+|++|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~ 248 (297)
T d1q0ra_ 169 EGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDP 248 (297)
T ss_dssp CSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCS
T ss_pred chhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhhhhccCCceEEEEeCCCC
Confidence 00000 00 00000001111111111111 111111111111122222345556788899999999999999
Q ss_pred CcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 217 SVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
++|++..+.+.+.+|+ +++++++++||+++.|+|+++++.|.+||+
T Consensus 249 ~~~~~~~~~~~~~~p~-~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~ 294 (297)
T d1q0ra_ 249 IAPAPHGKHLAGLIPT-ARLAEIPGMGHALPSSVHGPLAEVILAHTR 294 (297)
T ss_dssp SSCTTHHHHHHHTSTT-EEEEEETTCCSSCCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCC-CEEEEECCCCCcchhhCHHHHHHHHHHHHH
Confidence 9999999999999999 899999999999999999999999999986
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1.2e-40 Score=245.48 Aligned_cols=251 Identities=22% Similarity=0.259 Sum_probs=173.0
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
.|+|.+.|++ |+|||+||++++...|..+++.| +||+|+++|+||||.|+.. ...++ ++++++|+.++++.++
T Consensus 14 ~i~y~~~G~G-~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~~-~~~~~~dl~~~l~~l~ 88 (277)
T d1brta_ 14 DLYYEDHGTG-QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQP---TTGYD-YDTFAADLNTVLETLD 88 (277)
T ss_dssp EEEEEEECSS-SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC---SSCCS-HHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccC-CeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCccccc---ccccc-hhhhhhhhhhhhhccC
Confidence 6889999976 58999999999999999999888 8999999999999999754 23454 9999999999999999
Q ss_pred CCeEEEEecChhH-HHHHHHHHhCCCccceeEEecCCCCCCCCC--CCCCCccHHHHHHHHHHHHhhhhhhh----hhc-
Q 024681 85 VNRCAYVGHSVSA-MIGLLASIRRPDLFTKLILIGASPRFLNDE--DYHGGFEEAEIDKVFRAMEANYEAWA----YGY- 156 (264)
Q Consensus 85 ~~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~- 156 (264)
.++++++|||||| .++..+|..+|++|+++|++++.+...... ........................+. ...
T Consensus 89 ~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (277)
T d1brta_ 89 LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFY 168 (277)
T ss_dssp CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHT
T ss_pred cccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhcccccc
Confidence 9999999999996 566677888999999999999865443221 12222222222222222211111111 100
Q ss_pred --ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHHHHcCCC
Q 024681 157 --APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQRHLGGR 233 (264)
Q Consensus 157 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~ 233 (264)
...................... ...............+....++++++|+++++|++|.+++.+. .+.+.+.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~- 246 (277)
T d1brta_ 169 NLDENLGTRISEEAVRNSWNTAAS-GGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPS- 246 (277)
T ss_dssp THHHHBTTTBCHHHHHHHHHHHHH-SCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTT-
T ss_pred ccchhhhhhhhHHHhhhhhcccch-hhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHhCCC-
Confidence 0011111111111111111111 1111111111122345566778899999999999999998765 5667788888
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++.+.|.+||++
T Consensus 247 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 247 AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 8999999999999999999999999999985
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2.2e-40 Score=243.85 Aligned_cols=252 Identities=18% Similarity=0.237 Sum_probs=177.6
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|++.|++ |+|||+||++++...|..+++.| +||+|+++|+||||.|+... ..+ +..++++|+.++++.++
T Consensus 10 ~l~y~~~G~g-~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~---~~~-~~~~~~~dl~~~l~~l~ 84 (274)
T d1a8qa_ 10 EIFYKDWGQG-RPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVW---DGY-DFDTFADDLNDLLTDLD 84 (274)
T ss_dssp EEEEEEECSS-SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS---SCC-SHHHHHHHHHHHHHHTT
T ss_pred EEEEEEECCC-CeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccc---ccc-cchhhHHHHHHHHHHhh
Confidence 7899999987 58999999999999999999988 89999999999999997642 334 48999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHH-hCCCccceeEEecCCCCCCCCCC-CCCCccHHHHHHHHHHHHh----hhhhhhhhccc
Q 024681 85 VNRCAYVGHSVSAMIGLLASI-RRPDLFTKLILIGASPRFLNDED-YHGGFEEAEIDKVFRAMEA----NYEAWAYGYAP 158 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 158 (264)
.++++++||||||.+++.+++ ..|++|++++++++.+....... ............+...... ........+..
T Consensus 85 ~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (274)
T d1a8qa_ 85 LRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFS 164 (274)
T ss_dssp CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhhHHHhhhhhhhhhh
Confidence 999999999999998888655 46899999999998654433222 2222222222222211111 11111111111
Q ss_pred c-cCCCCC-hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHHHHcCCCce
Q 024681 159 L-AVGADV-PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQRHLGGRNT 235 (264)
Q Consensus 159 ~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~ 235 (264)
. ...... ......+......................+..+.+.++++|+++|+|++|.++|.+. .+.+.+.+++ ++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~ 243 (274)
T d1a8qa_ 165 ANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPN-AE 243 (274)
T ss_dssp TTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTT-CE
T ss_pred ccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceeeeeccCCCCCcCHHHHHHHHHHhCCC-CE
Confidence 1 111111 112222222222223333333333344456667788999999999999999999765 4677788898 89
Q ss_pred EEEecCCCCcccc--cChhcHHHHHHHHhcC
Q 024681 236 VELLKIEGHLPHL--SAPAIVGPVIRRALSR 264 (264)
Q Consensus 236 ~~~~~~~gH~~~~--~~~~~~~~~i~~fl~~ 264 (264)
+++++++||++++ ++|++|.+.|.+||++
T Consensus 244 ~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 244 LKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp EEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred EEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 9999999998776 5689999999999986
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=5.6e-40 Score=242.25 Aligned_cols=252 Identities=19% Similarity=0.242 Sum_probs=172.2
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+|+|++.|++ |+|||+||++++...|..+++.| ++|+|+++|+||||.|+.. ...|+ ++++++|+.++++.++
T Consensus 14 ~i~y~~~G~g-~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~---~~~~~-~~~~~~di~~~i~~l~ 88 (279)
T d1hkha_ 14 ELYYEDQGSG-QPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKV---NTGYD-YDTFAADLHTVLETLD 88 (279)
T ss_dssp EEEEEEESSS-EEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCC---SSCCS-HHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccC-CeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCcccc---ccccc-hhhhhhhhhhhhhhcC
Confidence 7899999986 68999999999999999999877 9999999999999999764 24454 9999999999999999
Q ss_pred CCeEEEEecChhH-HHHHHHHHhCCCccceeEEecCCCCCCCC-CCCCCCccHHHHHHHHHHHHhhhhhhhh-------h
Q 024681 85 VNRCAYVGHSVSA-MIGLLASIRRPDLFTKLILIGASPRFLND-EDYHGGFEEAEIDKVFRAMEANYEAWAY-------G 155 (264)
Q Consensus 85 ~~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 155 (264)
.++++|+|||||| .++..+|..+|++|++++++++....... .........................+.. .
T Consensus 89 ~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (279)
T d1hkha_ 89 LRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYN 168 (279)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred cCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhhhhhhcc
Confidence 9999999999996 66777788899999999999976544322 2222222222222222111111111110 0
Q ss_pred cccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcC--CccccccCCcccCEEEEecCCCCCcchh-hHHHHHHHcCC
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFD--TDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYLQRHLGG 232 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~ 232 (264)
...................................... .+..+.+.++++|+++++|++|.+++.+ ..+.+.+.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p~ 248 (279)
T d1hkha_ 169 LDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPE 248 (279)
T ss_dssp HHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTT
T ss_pred cchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHhCCC
Confidence 11111111112222222222222111111111111111 1112334567899999999999999865 56788888898
Q ss_pred CceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 233 RNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++++.|.+||++
T Consensus 249 -~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 249 -ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp -SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred -CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 8999999999999999999999999999985
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=1.7e-40 Score=245.48 Aligned_cols=250 Identities=19% Similarity=0.286 Sum_probs=170.1
Q ss_pred eeEEEEeCC-CCceEEEecCCCCCh---hhHHHhhhhc-CCceEEEecCCCCCCCCCCCCC-CcccchHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQ---SAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFD-FRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~---~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~~~~~~ 80 (264)
.++|...|+ ++|+|||+||++++. ..|..+++.| ++|+|+++|+||||.|+..... .....+.++.++++.+++
T Consensus 15 ~~h~~~~G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~i 94 (281)
T d1c4xa_ 15 ASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLM 94 (281)
T ss_dssp CEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCCCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCCccccccccccccchhhHHHhhhhccccc
Confidence 578888997 568999999988654 4578889999 9999999999999999764221 112234778899999999
Q ss_pred HHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhhhhhhhcccc
Q 024681 81 DTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYEAWAYGYAPL 159 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 159 (264)
+.++.++++++||||||.+++.+|.++|++|+++|++++.+...... ......+...... ....+.......
T Consensus 95 ~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (281)
T d1c4xa_ 95 NHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR-------PPELARLLAFYADPRLTPYRELIHSF 167 (281)
T ss_dssp HHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSC-------CHHHHHHHTGGGSCCHHHHHHHHHTT
T ss_pred cccccccceeccccccccccccccccccccccceEEeccccCccccc-------hhHHHHHHHhhhhcccchhhhhhhhh
Confidence 99999999999999999999999999999999999999864322111 1111111111110 000111111111
Q ss_pred cCCCCC----hHHHHHHHHhhcccCchhh-hhhhhhh-----cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHH
Q 024681 160 AVGADV----PAAVREFSRTLFNMRPDIS-LFVSKTV-----FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRH 229 (264)
Q Consensus 160 ~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 229 (264)
...... ................... ....... ........+.++++|+|+++|++|.++|++..+.+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 247 (281)
T d1c4xa_ 168 VYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKH 247 (281)
T ss_dssp SSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHH
T ss_pred cccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCHHHHHHHHHH
Confidence 111111 1111111111111000000 0011000 01223345688999999999999999999999999999
Q ss_pred cCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 230 LGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 230 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++ +++++++++||++++|+|+++++.|.+||+.
T Consensus 248 ~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 248 LKH-AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp CSS-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred CCC-CEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 998 8999999999999999999999999999974
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=8.2e-40 Score=240.81 Aligned_cols=254 Identities=17% Similarity=0.236 Sum_probs=179.6
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|+..|+ +.|+|||+||++++...|..+++.| +||+|+++|+||||.|+.+ ...|+ ++++++|+.++++.
T Consensus 9 ~~l~y~~~G~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~---~~~~~-~~~~~~~~~~~l~~ 84 (275)
T d1a88a_ 9 TNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQP---STGHD-MDTYAADVAALTEA 84 (275)
T ss_dssp CEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC---SSCCS-HHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccc---ccccc-cccccccccccccc
Confidence 4689999996 4589999999999999999999988 9999999999999999764 23454 99999999999999
Q ss_pred hCCCeEEEEecCh-hHHHHHHHHHhCCCccceeEEecCCCCCCCCCC-CCCCccHHHHHHHHHHHHhhhhhhhh----h-
Q 024681 83 LGVNRCAYVGHSV-SAMIGLLASIRRPDLFTKLILIGASPRFLNDED-YHGGFEEAEIDKVFRAMEANYEAWAY----G- 155 (264)
Q Consensus 83 ~~~~~~~l~G~S~-Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 155 (264)
++.++++++|||+ ||.+++.+|.++|++|+++|++++.+....... .......................+.. .
T Consensus 85 l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (275)
T d1a88a_ 85 LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGP 164 (275)
T ss_dssp HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred ccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhhhhHHHHHhhhhhh
Confidence 9999999999997 666778889999999999999998654433322 22223333333332222221111111 1
Q ss_pred ccccc--CCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHHHHcCC
Q 024681 156 YAPLA--VGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQRHLGG 232 (264)
Q Consensus 156 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~ 232 (264)
+.... .........+........................+....+.++++|+++++|++|.++|.+. .+.+.+.+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~ 244 (275)
T d1a88a_ 165 FYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLAN 244 (275)
T ss_dssp TTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTT
T ss_pred hhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCCCCCcCHHHHHHHHHHhCCC
Confidence 11110 01111112222222222222223333333334455666677899999999999999998754 5677788888
Q ss_pred CceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 233 RNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++++||+++.|+|+++++.|.+||+.
T Consensus 245 -~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 245 -ATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp -EEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred -CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 8999999999999999999999999999973
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.2e-40 Score=244.86 Aligned_cols=239 Identities=19% Similarity=0.280 Sum_probs=167.1
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhh---HHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSA---WQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~---~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
+++|++.|++ |+|||+||++++... |..+++.| ++|+|+++|+||||.|..+. ...+ +.++.++++..+++.
T Consensus 14 ~~~Y~~~G~G-~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~--~~~~-~~~~~~~~~~~~~~~ 89 (271)
T d1uk8a_ 14 LTNYHDVGEG-QPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPE--NYNY-SKDSWVDHIIGIMDA 89 (271)
T ss_dssp EEEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCT--TCCC-CHHHHHHHHHHHHHH
T ss_pred EEEEEEEeeC-CeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCccccc--cccc-cccccchhhhhhhhh
Confidence 5899999987 589999999876544 55677888 99999999999999997642 2233 489999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCC-----CCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDY-----HGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
++.++++|+||||||.+++.+|.++|++++++|++++.+........ ................. ..
T Consensus 90 l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 160 (271)
T d1uk8a_ 90 LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFA---------YD 160 (271)
T ss_dssp TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHC---------SC
T ss_pred hcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhhccchhHHHHHHHHHHh---------hh
Confidence 99999999999999999999999999999999999986433221100 00000000000000000 00
Q ss_pred cccCCCCChHHHHHHHHhhc---------ccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHH
Q 024681 158 PLAVGADVPAAVREFSRTLF---------NMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR 228 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 228 (264)
.... ............. ............. .......+.++++|+++|+|++|.++|.+..+.+.+
T Consensus 161 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 235 (271)
T d1uk8a_ 161 RSLV---TDELARLRYEASIQPGFQESFSSMFPEPRQRWIDA--LASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGE 235 (271)
T ss_dssp GGGC---CHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHH--HCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred cccc---hhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhh--ccccHHHHHhhccceeEEecCCCCCcCHHHHHHHHH
Confidence 0000 0111111111100 0000000111110 122335578899999999999999999999999999
Q ss_pred HcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 229 HLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 229 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+++ +++++++++||+++.|+|+++++.|.+||++
T Consensus 236 ~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 236 LIDR-AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp HCTT-EEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred hCCC-CEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 9999 8999999999999999999999999999985
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=3.8e-41 Score=247.18 Aligned_cols=241 Identities=19% Similarity=0.261 Sum_probs=168.7
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChh---hHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQS---AWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~---~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+++|.+.|++ |+|||+||++++.. .|..+.+.| ++|+|+++|+||||.|+.+. ..+ +.+++++++.++++
T Consensus 12 ~~l~y~~~G~g-~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~---~~~-~~~~~~~~~~~~i~ 86 (268)
T d1j1ia_ 12 VETRYLEAGKG-QPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPD---IEY-TQDRRIRHLHDFIK 86 (268)
T ss_dssp EEEEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCS---SCC-CHHHHHHHHHHHHH
T ss_pred EEEEEEEEcCC-CeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCc---ccc-ccccccccchhhHH
Confidence 36899999987 57999999987553 577888889 99999999999999997642 333 48999999999999
Q ss_pred HhCC-CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCC-----CCccHHHHHHHHHHHHhhhhhhhhh
Q 024681 82 TLGV-NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH-----GGFEEAEIDKVFRAMEANYEAWAYG 155 (264)
Q Consensus 82 ~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
.++. ++++++|||+||.+++.+|.++|++|+++|+++++.......... ........... ...
T Consensus 87 ~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 155 (268)
T d1j1ia_ 87 AMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHL-----------VKA 155 (268)
T ss_dssp HSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHH-----------HHH
T ss_pred HhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhhhhhhhhhhhhHHH-----------HHH
Confidence 9987 479999999999999999999999999999999864432211110 00111111111 111
Q ss_pred cccccCCCCChHHHHHH-HHhhcccCch----hhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 156 YAPLAVGADVPAAVREF-SRTLFNMRPD----ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
......... ....... .......... ...............+.+.++++|+++|+|++|.++|++..+.+.+.+
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~ 234 (268)
T d1j1ia_ 156 LTNDGFKID-DAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI 234 (268)
T ss_dssp HSCTTCCCC-HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred Hhhhhhhhh-hhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC
Confidence 111111111 1111111 1111100000 011111111223344567889999999999999999999999999999
Q ss_pred CCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 231 GGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 231 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++ +++++++++||+++.|+|+++.+.|.+||.+
T Consensus 235 ~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 235 DD-SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp TT-EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CC-CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 99 8999999999999999999999999999963
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2.2e-39 Score=238.27 Aligned_cols=252 Identities=19% Similarity=0.237 Sum_probs=177.4
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|+..|++ |+|||+||++++...|..+++.| +||+|+++|+||||.|+.+ ...+ +++++++|+.++++++
T Consensus 9 ~~i~y~~~G~g-~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~---~~~~-~~~~~~~~~~~~l~~l 83 (273)
T d1a8sa_ 9 TQIYYKDWGSG-QPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQP---WSGN-DMDTYADDLAQLIEHL 83 (273)
T ss_dssp CEEEEEEESCS-SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC---SSCC-SHHHHHHHHHHHHHHT
T ss_pred cEEEEEEECCC-CeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCccccc---cccc-cccchHHHHHHHHHhc
Confidence 36899999987 57999999999999999999988 8999999999999999764 2345 4999999999999999
Q ss_pred CCCeEEEEecChhHHHH-HHHHHhCCCccceeEEecCCCCCCCCCC-CCCCccHHHHHHHHHHHHhhhh----hhhhhc-
Q 024681 84 GVNRCAYVGHSVSAMIG-LLASIRRPDLFTKLILIGASPRFLNDED-YHGGFEEAEIDKVFRAMEANYE----AWAYGY- 156 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a-~~~a~~~p~~v~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~- 156 (264)
+.++.+++|||+||.++ ..+|..+|++|++++++++.+....... ...................... ......
T Consensus 84 ~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (273)
T d1a8sa_ 84 DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPF 163 (273)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999988655 5556678999999999998765433222 2222222222222221111111 111111
Q ss_pred ccc--cCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc-CCC
Q 024681 157 APL--AVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL-GGR 233 (264)
Q Consensus 157 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~ 233 (264)
... ..........+........................+....++++++|+++++|++|.++|.+..+.+.+.+ ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~- 242 (273)
T d1a8sa_ 164 FGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKG- 242 (273)
T ss_dssp SSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTT-
T ss_pred hhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCCCCCCCHHHHHHHHHHhCCC-
Confidence 000 01111122233322222222333333344444455666778889999999999999999988877776554 66
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++++++||++++|+|+++++.|.+||+
T Consensus 243 ~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 243 STLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp CEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 899999999999999999999999999996
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=1.9e-39 Score=240.92 Aligned_cols=255 Identities=18% Similarity=0.191 Sum_probs=168.8
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
+++|.+.|++ |+|||+||++++...|..+++.| ++|+|+++|+||||.|+..........+++++++|+.++++.++.
T Consensus 19 ~l~y~~~G~g-p~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~a~~~~~~~~~l~~ 97 (293)
T d1ehya_ 19 KIHYVREGAG-PTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGI 97 (293)
T ss_dssp EEEEEEEECS-SEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHHHHHHHHHHHTTC
T ss_pred EEEEEEECCC-CeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCcccCCccccccccccccchhhhhHHHhhhhhcCc
Confidence 6899999986 68999999999999999999999 999999999999999976433333333589999999999999999
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCC-c--c-HHH------HHHHHHHHHhhhhhhhhh
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG-F--E-EAE------IDKVFRAMEANYEAWAYG 155 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-~--~-~~~------~~~~~~~~~~~~~~~~~~ 155 (264)
++++++||||||.+|+.+|.++|+++.++|++++............. . . ... ..............+...
T Consensus 98 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (293)
T d1ehya_ 98 EKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKH 177 (293)
T ss_dssp CCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHH
T ss_pred cccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhccchhhhhhccchhHHHHHHHH
Confidence 99999999999999999999999999999999986432111110000 0 0 000 000000000001111111
Q ss_pred cc-cccCCC--CChHHHHHHHHhhcccCc-hhhhhhhhhhcCCc----cccccCCcccCEEEEecCCCCCcchhhHH-HH
Q 024681 156 YA-PLAVGA--DVPAAVREFSRTLFNMRP-DISLFVSKTVFDTD----LRGILGLVRVPCVIIQTSKDVSVPVSVAE-YL 226 (264)
Q Consensus 156 ~~-~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~i~~P~l~i~g~~D~~~~~~~~~-~~ 226 (264)
+. ...... ........+......... ......+......+ .......+++|+++|+|++|.++|.+... .+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~ 257 (293)
T d1ehya_ 178 FFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFV 257 (293)
T ss_dssp HHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHH
T ss_pred hhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHH
Confidence 11 111111 112222333222221111 11111111111111 11223567899999999999999977654 56
Q ss_pred HHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 227 QRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 227 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+..++ +++++++++||+++.|+|+++++.|.+||+
T Consensus 258 ~~~~~~-~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 258 PKYYSN-YTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp HHHBSS-EEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred HHhCCC-CEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 667787 899999999999999999999999999985
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=6.6e-40 Score=243.27 Aligned_cols=252 Identities=18% Similarity=0.231 Sum_probs=174.7
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|.+.|+ .+|+|||+||++++...|..+++.| ++|+|+++|+||||.|+.+ ...+ +++++++|+.++++++
T Consensus 17 ~~i~y~~~G~~~~p~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~S~~~---~~~~-~~~~~~~~l~~~l~~l 92 (291)
T d1bn7a_ 17 ERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKP---DLDY-FFDDHVRYLDAFIEAL 92 (291)
T ss_dssp EEEEEEEESCSSSSCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCC---SCCC-CHHHHHHHHHHHHHHT
T ss_pred EEEEEEEeCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCcccccc---cccc-chhHHHHHHhhhhhhh
Confidence 4789999996 4589999999999999999999999 9999999999999999764 2344 4999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHH-----HHHHHhhhhhhhhhc-c
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKV-----FRAMEANYEAWAYGY-A 157 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~ 157 (264)
+.++++++||||||.+++.+|.++|+++++++++++............ ......... ............... .
T Consensus 93 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (291)
T d1bn7a_ 93 GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPE-FARETFQAFRTADVGRELIIDQNAFIEGVLP 171 (291)
T ss_dssp TCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCH-HHHHHHHHHTSTTHHHHHHTTSCHHHHTHHH
T ss_pred ccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhh-hhhhHHHHHhhhhhHHHhhhhhhhhHHhhhh
Confidence 999999999999999999999999999999999987644322211110 000000000 000000000010111 1
Q ss_pred cccCCCCChHHHHHHHHhhcccCc-hhhhhhhhhhcC-----------CccccccCCcccCEEEEecCCCCCcchhhHHH
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRP-DISLFVSKTVFD-----------TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEY 225 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 225 (264)
..............+......... ............ .+....++++++|+++++|++|.++|++..++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~ 251 (291)
T d1bn7a_ 172 KCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAAR 251 (291)
T ss_dssp HTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHH
T ss_pred hhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEEEEEeCCCCCcCHHHHHH
Confidence 111111222222222222221111 111111111100 11223356789999999999999999999999
Q ss_pred HHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 226 LQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 226 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+.+.+++ +++++++++||+++.|+|+++++.|.+||+
T Consensus 252 ~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~ 288 (291)
T d1bn7a_ 252 LAESLPN-CKTVDIGPGLHYLQEDNPDLIGSEIARWLP 288 (291)
T ss_dssp HHHHSTT-EEEEEEEEESSCGGGTCHHHHHHHHHHHSG
T ss_pred HHHHCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHH
Confidence 9999999 899999999999999999999999999997
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-40 Score=246.45 Aligned_cols=253 Identities=13% Similarity=0.242 Sum_probs=171.6
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+|+|.+.|++ |+|||+||++++...|..+++.| +||+|+++|+||||.|..+. ....|+ ++++++++.+++++++
T Consensus 23 ~i~y~~~G~g-p~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~-~~~~~~-~~~~~~~i~~l~~~l~ 99 (322)
T d1zd3a2 23 RLHFVELGSG-PAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPP-EIEEYC-MEVLCKEMVTFLDKLG 99 (322)
T ss_dssp EEEEEEECCS-SEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCS-CGGGGS-HHHHHHHHHHHHHHHT
T ss_pred EEEEEEEcCC-CeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEecccccccccccc-cccccc-ccccchhhhhhhhccc
Confidence 6899999976 79999999999999999999999 78999999999999997642 234454 9999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCC-----CC----------ccHHHHHHHHHHHHhhh
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH-----GG----------FEEAEIDKVFRAMEANY 149 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~-----~~----------~~~~~~~~~~~~~~~~~ 149 (264)
.++++++||||||.+++.+|.++|++++++|+++++.......... .. ................+
T Consensus 100 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (322)
T d1zd3a2 100 LSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTF 179 (322)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTSTTHHHHHHHHTHHHHH
T ss_pred ccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhHHhhhccchhhhhhhhhHHHHH
Confidence 9999999999999999999999999999999998753322111000 00 00000000000000001
Q ss_pred hhhhhhccccc---------------------CCC-CChHHHHHHHHhhcccCchhhhhhhh---hhcCCccccccCCcc
Q 024681 150 EAWAYGYAPLA---------------------VGA-DVPAAVREFSRTLFNMRPDISLFVSK---TVFDTDLRGILGLVR 204 (264)
Q Consensus 150 ~~~~~~~~~~~---------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~ 204 (264)
........... ... ........+...+............. .....+......+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 259 (322)
T d1zd3a2 180 KSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKIL 259 (322)
T ss_dssp HHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHTTSCHHHHHHHHHTTTTCCCC
T ss_pred HHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcccccccccccccccccccchhhhcccCC
Confidence 00000000000 000 00111122211111111000000000 001122334567889
Q ss_pred cCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 205 VPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 205 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+|+++++|++|.+++++..+.+.+.+++ .++++++++||++++|+|++|.+.|.+||+
T Consensus 260 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~FL~ 317 (322)
T d1zd3a2 260 IPALMVTAEKDFVLVPQMSQHMEDWIPH-LKRGHIEDCGHWTQMDKPTEVNQILIKWLD 317 (322)
T ss_dssp SCEEEEEETTCSSSCGGGGTTGGGTCTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 899999999999999999999999999996
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2.2e-39 Score=237.88 Aligned_cols=253 Identities=17% Similarity=0.268 Sum_probs=177.5
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+|+|++.|++ |+|||+||++++...|..+++.| +||+|+++|+||||.|+.+ ...+ +++++++++.++++.+
T Consensus 9 ~~l~y~~~G~g-~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~-~~~~~~~~~~~~~~~~ 83 (271)
T d1va4a_ 9 TQIYFKDWGSG-KPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQP---WTGN-DYDTFADDIAQLIEHL 83 (271)
T ss_dssp CEEEEEEESSS-SEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCC---SSCC-SHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEcCC-CeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccc---cccc-ccccccccceeeeeec
Confidence 46899999987 57899999999999999999999 6999999999999999764 2344 4999999999999999
Q ss_pred CCCeEEEEecChhHHHH-HHHHHhCCCccceeEEecCCCCCCCC-CCCCCCccHHHHHHHHHHHHhhh----hhhhhhcc
Q 024681 84 GVNRCAYVGHSVSAMIG-LLASIRRPDLFTKLILIGASPRFLND-EDYHGGFEEAEIDKVFRAMEANY----EAWAYGYA 157 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a-~~~a~~~p~~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 157 (264)
+.++++++|||+||.++ ..+|..+|+++++++++++....... ....................... ..+.....
T Consensus 84 ~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (271)
T d1va4a_ 84 DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFY 163 (271)
T ss_dssp TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhhhhhhhhhhcchhh
Confidence 99999999999988665 55677889999999999986544322 22223333333322222211111 11111111
Q ss_pred cccCCCCChH-HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHH-HHcCCCce
Q 024681 158 PLAVGADVPA-AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ-RHLGGRNT 235 (264)
Q Consensus 158 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-~~~~~~~~ 235 (264)
.......... ...........................+....++++++|+++++|++|.++|.+...++. +.+++ ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~-~~ 242 (271)
T d1va4a_ 164 GINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKG-AE 242 (271)
T ss_dssp TGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHHHSTT-CE
T ss_pred cccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccceeecccCCCCCCCHHHHHHHHHHhCCC-CE
Confidence 1111111111 222222222222223333333334445556677888999999999999999988876664 55677 89
Q ss_pred EEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 236 VELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++||+++.|+|+++++.|.+||++
T Consensus 243 ~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 243 LKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp EEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred EEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 99999999999999999999999999986
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=3.5e-39 Score=238.91 Aligned_cols=253 Identities=15% Similarity=0.206 Sum_probs=164.8
Q ss_pred eeEEEEeCC--CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT--GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 7 ~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
+++|+..|+ ++|+||++||++++...|...+..+ +||+|+++|+||||.|+.+ +...|+ ++++++|+.+++++
T Consensus 13 ~i~y~~~g~~~~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~--~~~~~~-~~~~~~~l~~ll~~ 89 (290)
T d1mtza_ 13 YIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEP--DQSKFT-IDYGVEEAEALRSK 89 (290)
T ss_dssp EEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCC--CGGGCS-HHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCcccccc--cccccc-ccchhhhhhhhhcc
Confidence 678999986 5579999999988777777666666 8999999999999999764 234565 99999999999999
Q ss_pred h-CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCC----CCCccHHHHHHHHHHHHh------hhhh
Q 024681 83 L-GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDY----HGGFEEAEIDKVFRAMEA------NYEA 151 (264)
Q Consensus 83 ~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~------~~~~ 151 (264)
+ +.++++++||||||.+++.+|.++|++|+++|++++.......... .................. ....
T Consensus 90 l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (290)
T d1mtza_ 90 LFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQE 169 (290)
T ss_dssp HHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred cccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhHHHHHHHHHhhhhccccchhHHH
Confidence 7 7899999999999999999999999999999999975431100000 000000000000000000 0000
Q ss_pred hhhh-cc-cccCCCC-ChHHHHHHHHhhccc-----CchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH
Q 024681 152 WAYG-YA-PLAVGAD-VPAAVREFSRTLFNM-----RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA 223 (264)
Q Consensus 152 ~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 223 (264)
.... .. ....... ............... ...............+....++++++|+++++|++|.++| +..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~-~~~ 248 (290)
T d1mtza_ 170 AVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVA 248 (290)
T ss_dssp HHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTCSSCH-HHH
T ss_pred HHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhcccceEEEEEeCCCCCCH-HHH
Confidence 0000 00 0000011 111111111000000 0000000111112334556677889999999999999875 568
Q ss_pred HHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 224 EYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+.+.+.+++ +++++++++||+++.|+|+++.+.|.+||.+
T Consensus 249 ~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 288 (290)
T d1mtza_ 249 RVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKLLSDFILK 288 (290)
T ss_dssp HHHHHHSTT-CEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred HHHHHHCCC-CEEEEECCCCCchHHhCHHHHHHHHHHHHHH
Confidence 889999999 8999999999999999999999999999975
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=3.2e-39 Score=241.85 Aligned_cols=255 Identities=13% Similarity=0.102 Sum_probs=168.8
Q ss_pred eeEEEEeCC--CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT--GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 7 ~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
+++|.+.|+ ++|+|||+||++++...|..++..| .||+|+++|+||||.|+.+. +...|+ ++.+++|+.+++++
T Consensus 35 ~~~y~~~G~~~~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~-~~~~~~-~~~~~~~l~~~l~~ 112 (310)
T d1b6ga_ 35 RAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV-DEEDYT-FEFHRNFLLALIER 112 (310)
T ss_dssp EEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEES-CGGGCC-HHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCcccccccc-cccccc-ccccccchhhhhhh
Confidence 689999987 4578999999999999999999988 89999999999999997531 234455 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC-----CCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED-----YHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
++.++++|+||||||.+++.+|.++|++|+++|+++++........ ........... ...............+.
T Consensus 113 l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 191 (310)
T d1b6ga_ 113 LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTA-WKYDLVTPSDLRLDQFM 191 (310)
T ss_dssp HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHH-HHHHHHSCSSCCHHHHH
T ss_pred ccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhh-hhhhhccchhhhhhhhh
Confidence 9999999999999999999999999999999999998643221110 00000000000 00000000000000000
Q ss_pred cccCCCCChHHHHHHHHhhcccCch-hhhhhhhhhc----------CCccccccCCcccCEEEEecCCCCCcchhhHHHH
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPD-ISLFVSKTVF----------DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYL 226 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 226 (264)
..............+...+...... ....+..... ..........+++|+++++|++|.+++++..+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 271 (310)
T d1b6ga_ 192 KRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPM 271 (310)
T ss_dssp HHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSSHHHHHHH
T ss_pred hccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEEeCCCCCCCHHHHHHH
Confidence 0000111111111111111110000 0000000000 0011122356789999999999999999999999
Q ss_pred HHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 227 QRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 227 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+.+++..++++++++||+++.++|+.+++.|.+||++
T Consensus 272 ~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 272 KALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp HHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred HHhcCCCccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 99998744788899999999999999999999999974
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=7.6e-37 Score=229.17 Aligned_cols=253 Identities=17% Similarity=0.171 Sum_probs=157.8
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|++.|+ ..|+|||+||++++...|......+ .+|+|+++|+||||.|+++.. ...|+ ++++++|+.++++++
T Consensus 22 ~~i~y~~~G~~~g~pvvllHG~~g~~~~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~-~~~~~-~~~~~~dl~~~~~~l 99 (313)
T d1azwa_ 22 HTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHAD-LVDNT-TWDLVADIERLRTHL 99 (313)
T ss_dssp CEEEEEEEECTTSEEEEEECSTTTTCCCGGGGGGSCTTTEEEEEECCTTSTTSBSTTC-CTTCC-HHHHHHHHHHHHHHT
T ss_pred cEEEEEEecCCCCCEEEEECCCCCCccchHHHhHHhhcCCEEEEEeccccCCCCcccc-ccchh-HHHHHHHHHHHHHhh
Confidence 3789999996 4578999999999888888777777 999999999999999975422 34454 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCC--CC---ccHHHHHHHHHHHHhhh-hhhhhhcc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH--GG---FEEAEIDKVFRAMEANY-EAWAYGYA 157 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~-~~~~~~~~ 157 (264)
+.++++|+||||||.+++.+|.++|+++++++++++.+......... .. ........+........ ........
T Consensus 100 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (313)
T d1azwa_ 100 GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFH 179 (313)
T ss_dssp TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHHTSCGGGTTSHHHHHH
T ss_pred ccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchhhhHHHHHHHHhhhhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999864321100000 00 00000000000000000 00000000
Q ss_pred cccCCCCChHHH---HHHHH---hhcc--cCchhhh------------hhh------hhhc---CCccccccCCcccCEE
Q 024681 158 PLAVGADVPAAV---REFSR---TLFN--MRPDISL------------FVS------KTVF---DTDLRGILGLVRVPCV 208 (264)
Q Consensus 158 ~~~~~~~~~~~~---~~~~~---~~~~--~~~~~~~------------~~~------~~~~---~~~~~~~~~~i~~P~l 208 (264)
............ ..+.. .... ....... ... .... ..........+++|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 259 (313)
T d1azwa_ 180 RRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPGV 259 (313)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTCCEE
T ss_pred hhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhccccccchhhhHhhhhcCCCCEE
Confidence 000000000000 00000 0000 0000000 000 0000 0112234566789999
Q ss_pred EEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc-cChhcHHHHHHHH
Q 024681 209 IIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL-SAPAIVGPVIRRA 261 (264)
Q Consensus 209 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~f 261 (264)
+|+|++|.++|++..+.+.+.+|+ +++++++++||+++. +..+++.+++.+|
T Consensus 260 ii~G~~D~~~p~~~~~~l~~~~p~-a~~~~i~~aGH~~~ep~~~~~li~a~~~f 312 (313)
T d1azwa_ 260 IVHGRYDVVCPLQSAWDLHKAWPK-AQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCTT-SEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCCCCCchHHHHHHHHHHHh
Confidence 999999999999999999999999 899999999998762 1223455555555
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-38 Score=219.52 Aligned_cols=183 Identities=19% Similarity=0.137 Sum_probs=147.9
Q ss_pred eeEEEEeCC----CCceEEEecCCCCChhhHHHh--hhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 7 ALHVRVVGT----GDRILVLAHGFGTDQSAWQRI--LPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 7 ~~~~~~~g~----~~p~vv~~hG~~~~~~~~~~~--~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
.++|++.++ .+|+|||+||++++...|..+ ++.| +||+|+++|+||||.|+..... ..+. ....++++.+
T Consensus 17 ~i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~-~~~~-~~~~~~~l~~ 94 (208)
T d1imja_ 17 ALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAP-APIG-ELAPGSFLAA 94 (208)
T ss_dssp EECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCS-SCTT-SCCCTHHHHH
T ss_pred EEEEEEecCCCCCCCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcc-cccc-hhhhhhhhhh
Confidence 578877653 457999999999999999874 5677 8999999999999999754221 2232 4455677888
Q ss_pred HHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc
Q 024681 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP 158 (264)
Q Consensus 79 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
+++.++.++++|+||||||.+++.+|.++|++++++|+++|.....
T Consensus 95 ~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~---------------------------------- 140 (208)
T d1imja_ 95 VVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK---------------------------------- 140 (208)
T ss_dssp HHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG----------------------------------
T ss_pred cccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCcccccc----------------------------------
Confidence 9999999999999999999999999999999999999998742100
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEE
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 238 (264)
.....+.++++|+|+|+|++|.++|.+. +..+.+++ .++.+
T Consensus 141 ------------------------------------~~~~~~~~i~~P~Lii~G~~D~~~~~~~--~~~~~~~~-~~~~~ 181 (208)
T d1imja_ 141 ------------------------------------INAANYASVKTPALIVYGDQDPMGQTSF--EHLKQLPN-HRVLI 181 (208)
T ss_dssp ------------------------------------SCHHHHHTCCSCEEEEEETTCHHHHHHH--HHHTTSSS-EEEEE
T ss_pred ------------------------------------cccccccccccccccccCCcCcCCcHHH--HHHHhCCC-CeEEE
Confidence 0001234578999999999999887653 45567888 89999
Q ss_pred ecCCCCcccccChhcHHHHHHHHhcC
Q 024681 239 LKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 239 ~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++++||..++++|+++.+.+.+||++
T Consensus 182 i~~~gH~~~~~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 182 MKGAGHPCYLDKPEEWHTGLLDFLQG 207 (208)
T ss_dssp ETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred ECCCCCchhhhCHHHHHHHHHHHHhc
Confidence 99999999999999999999999974
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=8.8e-37 Score=221.83 Aligned_cols=237 Identities=16% Similarity=0.174 Sum_probs=158.8
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecC
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHS 94 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S 94 (264)
++|||+||+++++..|+.+++.| +||+|+++|+||||.|+.+. ...+ ++++++.|+..+++.... ++++++|||
T Consensus 3 ~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~lvghS 79 (258)
T d1xkla_ 3 KHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKI--EELR-TLYDYTLPLMELMESLSADEKVILVGHS 79 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCG--GGCC-SHHHHHHHHHHHHHTSCSSSCEEEEEET
T ss_pred CcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC--CCCc-chHHHHHHHhhhhhcccccccccccccc
Confidence 58999999999999999999999 78999999999999997541 2334 489999999999988765 589999999
Q ss_pred hhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh-H--HHHH
Q 024681 95 VSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP-A--AVRE 171 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~ 171 (264)
+||.+++.++.++|++++++|++++......... ................................ . ....
T Consensus 80 ~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T d1xkla_ 80 LGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNS------SFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKF 153 (258)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCT------THHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHH
T ss_pred hhHHHHHHHhhhhccccceEEEecccCCCcccch------HHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHH
Confidence 9999999999999999999999997543221110 01111100000000000000000000000000 0 0000
Q ss_pred HHHhhcccCchhhhh-----------hhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec
Q 024681 172 FSRTLFNMRPDISLF-----------VSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (264)
............... ........+....+..+++|+++|+|++|..+|++..+.+.+.+++ +++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~i~ 232 (258)
T d1xkla_ 154 LAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV-TEAIEIK 232 (258)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC-SEEEEET
T ss_pred HHHHhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHCCC-CEEEEEC
Confidence 011111100000000 0011112233445667889999999999999999999999999999 8999999
Q ss_pred CCCCcccccChhcHHHHHHHHhcC
Q 024681 241 IEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++||++++|+|+++++.|.+|+++
T Consensus 233 ~~gH~~~~e~P~~~~~~l~e~~~k 256 (258)
T d1xkla_ 233 GADHMAMLCEPQKLCASLLEIAHK 256 (258)
T ss_dssp TCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCCCchHHhCHHHHHHHHHHHHHh
Confidence 999999999999999999999863
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=1.5e-35 Score=219.89 Aligned_cols=253 Identities=16% Similarity=0.155 Sum_probs=160.7
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCC-cccchHHHHHHHHHHHH-HH
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDF-RRYTTLDAYVDDLLNIL-DT 82 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~-~~~~~~~~~~~~~~~~~-~~ 82 (264)
.+++|.+.|++ |+|||+||++++...|..+++.| ++|+|+++|+||||.|+...... ..+. ..+..+++..++ +.
T Consensus 18 ~~i~y~~~G~g-~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 95 (298)
T d1mj5a_ 18 RRMAYIDEGTG-DPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYA-YAEHRDYLDALWEAL 95 (298)
T ss_dssp EEEEEEEESCS-SEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSC-HHHHHHHHHHHHHHT
T ss_pred EEEEEEEEcCC-CcEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCccccccccc-cchhhhhhccccccc
Confidence 36899999976 68999999999999999999999 99999999999999997643222 2232 555555555554 44
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHH----HHHhhhhhhhhh-cc
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFR----AMEANYEAWAYG-YA 157 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~ 157 (264)
.+.++++++||||||.+++.+|.++|++|++++++++.+.............. ....... ............ ..
T Consensus 96 ~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
T d1mj5a_ 96 DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRD-LFQAFRSQAGEELVLQDNVFVEQVLP 174 (298)
T ss_dssp TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHH-HHHHHHSTTHHHHHTTTCHHHHTHHH
T ss_pred cccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhh-hhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence 46789999999999999999999999999999999986543322222111111 1110000 000000000000 01
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhh-------------hhcCCccccccCCcccCEEEEecCCCCCcchhhHH
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSK-------------TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAE 224 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 224 (264)
................................ .....+....+..+++|+++++|++|.+.+ ...+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~-~~~~ 253 (298)
T d1mj5a_ 175 GLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTT-GRMR 253 (298)
T ss_dssp HTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSS-HHHH
T ss_pred ccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhhhhcceeEEEEecCCCCcCh-HHHH
Confidence 11111111112222222111111110000000 000112234567889999999999998765 4567
Q ss_pred HHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 225 YLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+.+.+++ .++++++ +||++++|+|+++++.|.+||++
T Consensus 254 ~~~~~~p~-~~~~~~~-~GH~~~~e~P~~v~~~i~~fl~~ 291 (298)
T d1mj5a_ 254 DFCRTWPN-QTEITVA-GAHFIQEDSPDEIGAAIAAFVRR 291 (298)
T ss_dssp HHHTTCSS-EEEEEEE-ESSCGGGTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-CEEEEeC-CCCchHHhCHHHHHHHHHHHHhh
Confidence 88888888 6776665 79999999999999999999974
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=6.9e-37 Score=222.47 Aligned_cols=231 Identities=13% Similarity=0.144 Sum_probs=155.5
Q ss_pred EEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeEEEEecChh
Q 024681 20 LVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRCAYVGHSVS 96 (264)
Q Consensus 20 vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S~G 96 (264)
.|||||+++++..|+.+++.| +||+|+++|+||||.|+.+. ...+ +++++++++.++++.+. .++++|+|||||
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~--~~~~-~~~~~~~~l~~~~~~~~~~~~~~lvGhS~G 81 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQI--EEIG-SFDEYSEPLLTFLEALPPGEKVILVGESCG 81 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG--GGCC-SHHHHTHHHHHHHHHSCTTCCEEEEEETTH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC--CCCC-CHHHHHHHhhhhhhhhccccceeecccchH
Confidence 589999999999999999999 78999999999999997541 2334 49999999999988875 679999999999
Q ss_pred HHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc----cccCCCCChHHHHHH
Q 024681 97 AMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA----PLAVGADVPAAVREF 172 (264)
Q Consensus 97 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 172 (264)
|.+++.++.++|++++++|++++........ ........................ ........... .
T Consensus 82 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 152 (256)
T d3c70a1 82 GLNIAIAADKYCEKIAAAVFHNSVLPDTEHC------PSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTL---L 152 (256)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESCCCCCSSSC------TTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHH---H
T ss_pred HHHHHHHhhcCchhhhhhheeccccCCcccc------hhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhh---h
Confidence 9999999999999999999999753321111 011111111000000000000000 00000000000 0
Q ss_pred HHhhcccCchhhhh-----------hhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecC
Q 024681 173 SRTLFNMRPDISLF-----------VSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241 (264)
Q Consensus 173 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (264)
.............. ................+++|+++|+|++|..+|++..+.+.+.+++ ++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~ 231 (256)
T d3c70a1 153 RENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP-DKVYKVEG 231 (256)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC-SEEEECCS
T ss_pred hhhhhhhcchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCCC-CEEEEECC
Confidence 01111000000000 0001112223334455789999999999999999999999999998 89999999
Q ss_pred CCCcccccChhcHHHHHHHHhc
Q 024681 242 EGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 242 ~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+||++++|+|+++++.|.+|++
T Consensus 232 agH~~~~e~P~~~~~~l~~~~~ 253 (256)
T d3c70a1 232 GDHKLQLTKTKEIAEILQEVAD 253 (256)
T ss_dssp CCSCHHHHSHHHHHHHHHHHHH
T ss_pred CCCchHHhCHHHHHHHHHHHHH
Confidence 9999999999999999999986
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=4.3e-35 Score=213.56 Aligned_cols=248 Identities=12% Similarity=0.063 Sum_probs=154.1
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+++|...++++|+|||+||++++...|..+++.| .||+|+++|+||||.|..... ..+. ......+........
T Consensus 5 ~~lh~~~~~~~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~--~~~~-~~~~~~~~~~~~~~~ 81 (264)
T d1r3da_ 5 NQLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHC--DNFA-EAVEMIEQTVQAHVT 81 (264)
T ss_dssp EEEESSCCBTTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC---------C-HHHHHHHHHHHTTCC
T ss_pred CeEEEcCCCCCCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccc--cccc-hhhhhhhhccccccc
Confidence 57888888888899999999999999999999999 689999999999999976421 1222 333344444444455
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHH-HHHHHHHH-hhhhhhhh-hccccc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEI-DKVFRAME-ANYEAWAY-GYAPLA 160 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~ 160 (264)
+.++++++||||||.+++.+|.++|+.+.+++++.+................... ........ ........ ......
T Consensus 82 ~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T d1r3da_ 82 SEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAV 161 (264)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGG
T ss_pred ccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 6679999999999999999999999999998887764432211111000000000 00000000 01111111 112222
Q ss_pred CCCCChHHHHHHHHhhcccCchhhhhhhh---hhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEE
Q 024681 161 VGADVPAAVREFSRTLFNMRPDISLFVSK---TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237 (264)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 237 (264)
............................. ........+.+..+++|+++++|++|..+ ..+.+. ++ ++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~-----~~~~~~-~~-~~~~ 234 (264)
T d1r3da_ 162 FSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAES-SG-LSYS 234 (264)
T ss_dssp GTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHHH-HC-SEEE
T ss_pred hcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH-----HHHHhc-CC-CeEE
Confidence 22222333333333222222222222111 11223445567788999999999999654 233333 45 7999
Q ss_pred EecCCCCcccccChhcHHHHHHHHhc
Q 024681 238 LLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 238 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++||++++|+|+++++.|.+||+
T Consensus 235 ~i~~~gH~~~~e~P~~~~~~i~~fl~ 260 (264)
T d1r3da_ 235 QVAQAGHNVHHEQPQAFAKIVQAMIH 260 (264)
T ss_dssp EETTCCSCHHHHCHHHHHHHHHHHHH
T ss_pred EECCCCCchHHHCHHHHHHHHHHHHH
Confidence 99999999999999999999999996
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=6.3e-33 Score=206.92 Aligned_cols=114 Identities=18% Similarity=0.235 Sum_probs=102.2
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.+|+|++.|+ +.|+|||+||++++...|..+...| ++|+|+++|+||+|.|++.. ....+. ...+++|+..+++.+
T Consensus 22 ~~i~y~~~G~~~g~pvvllHG~~~~~~~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~-~~~~~~-~~~~~~d~~~~~~~~ 99 (313)
T d1wm1a_ 22 HRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHA-SLDNNT-TWHLVADIERLREMA 99 (313)
T ss_dssp CEEEEEEEECTTSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTT-CCTTCS-HHHHHHHHHHHHHHT
T ss_pred cEEEEEEecCCCCCeEEEECCCCCcccchHHHHHHhhcCCEEEEEeCCCcccccccc-cccccc-hhhHHHHHHhhhhcc
Confidence 3789999996 4578999999999999999999999 99999999999999997642 223444 899999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+.++++++|||+||.+++.+|..+|++|++++++++..
T Consensus 100 ~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~ 137 (313)
T d1wm1a_ 100 GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 137 (313)
T ss_dssp TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCCcceeEeeecCCchhhHHHHHHhhhheeeeeccccc
Confidence 99999999999999999999999999999999998754
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=3.6e-32 Score=195.46 Aligned_cols=225 Identities=14% Similarity=0.139 Sum_probs=143.1
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecC
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHS 94 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 94 (264)
+++|||+||++++...|..+++.| +||+|+++|+||||.|...... ..+.+......++...++..+.++++++|||
T Consensus 11 ~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 89 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVH-TGPDDWWQDVMNGYEFLKNKGYEKIAVAGLS 89 (242)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTT-CCHHHHHHHHHHHHHHHHHHTCCCEEEEEET
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccccc-cchhHHHHHHHHHHhhhhhcccCceEEEEcc
Confidence 458999999999999999999999 7999999999999998542111 1111233333344445566688999999999
Q ss_pred hhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHH
Q 024681 95 VSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSR 174 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (264)
+||.+++.++.++|.. .+++++++..... ................... ............
T Consensus 90 ~Gg~~~~~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 149 (242)
T d1tqha_ 90 LGGVFSLKLGYTVPIE--GIVTMCAPMYIKS--------EETMYEGVLEYAREYKKRE----------GKSEEQIEQEME 149 (242)
T ss_dssp HHHHHHHHHHTTSCCS--CEEEESCCSSCCC--------HHHHHHHHHHHHHHHHHHH----------TCCHHHHHHHHH
T ss_pred hHHHHhhhhcccCccc--ccccccccccccc--------hhHHHHHHHHHHHHHhhhc----------cchhhhHHHHHh
Confidence 9999999999998853 4556665432111 1111111111111000000 000111111111
Q ss_pred hhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCCCccccc-Chh
Q 024681 175 TLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGHLPHLS-APA 252 (264)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~-~~~ 252 (264)
............... ........+..+++|+|+++|++|..+|++.++.+.+.+++. +++++++++||+++.+ .++
T Consensus 150 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 227 (242)
T d1tqha_ 150 KFKQTPMKTLKALQE--LIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKD 227 (242)
T ss_dssp HHTTSCCTTHHHHHH--HHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHH
T ss_pred hhhhhccchhhcccc--cccccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHH
Confidence 111111111100000 011223445678999999999999999999999999998543 7899999999999887 589
Q ss_pred cHHHHHHHHhcC
Q 024681 253 IVGPVIRRALSR 264 (264)
Q Consensus 253 ~~~~~i~~fl~~ 264 (264)
++.+.|.+||++
T Consensus 228 ~~~~~i~~Fl~~ 239 (242)
T d1tqha_ 228 QLHEDIYAFLES 239 (242)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999973
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=6e-32 Score=208.10 Aligned_cols=253 Identities=11% Similarity=0.005 Sum_probs=161.1
Q ss_pred eeEEEE---eCCCCceEEEecCCCCChhhHHHhhhhc--CC------ceEEEecCCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 7 ALHVRV---VGTGDRILVLAHGFGTDQSAWQRILPYL--NH------HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 7 ~~~~~~---~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g------~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
.|||.. .+++.++|||+||++++...|+.+++.| .| |+|+++|+||||.|+.+. ....|+ ....+++
T Consensus 93 ~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~-~~~~y~-~~~~a~~ 170 (394)
T d1qo7a_ 93 TIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP-LDKDFG-LMDNARV 170 (394)
T ss_dssp EEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCC-SSSCCC-HHHHHHH
T ss_pred EEEEEEEeccCCCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeecccccccCCCCCCC-CCCccC-HHHHHHH
Confidence 466643 3345689999999999999999999999 44 999999999999998643 234565 9999999
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHH---HHHHHHh-----
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDK---VFRAMEA----- 147 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----- 147 (264)
+..+++.++.++++++|||+||.++..++..+|+.+.+++++....................... .......
T Consensus 171 ~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
T d1qo7a_ 171 VDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYA 250 (394)
T ss_dssp HHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccccccccccccchhhhHHHHHHHHHHHHhhhhhh
Confidence 99999999999999999999999999999999999999999887644332222111111111110 0000000
Q ss_pred -------------------hhhhhh-hhcccccCCCCChHH-HHHHHHhhcccCchhhhhhhhhhc-------CCccccc
Q 024681 148 -------------------NYEAWA-YGYAPLAVGADVPAA-VREFSRTLFNMRPDISLFVSKTVF-------DTDLRGI 199 (264)
Q Consensus 148 -------------------~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 199 (264)
....+. ..+............ ...................+.... .......
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 330 (394)
T d1qo7a_ 251 MEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTASAPNGATMLQK 330 (394)
T ss_dssp HHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHHHHCC---------CTTT
T ss_pred hhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHHHHhhccccchhHHHHHHHhhcccccchhhhhcc
Confidence 000000 001111111111111 111111111111111111111110 1112233
Q ss_pred cCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 200 LGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 200 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
..+|++|+++++|.+|...+++ .+.+.+++.+++.+++++||++++|+|+++++.|.+||++
T Consensus 331 ~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~~ 392 (394)
T d1qo7a_ 331 ELYIHKPFGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQ 392 (394)
T ss_dssp TTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHH
T ss_pred CCcccCCeEEEEeCCCccccHH---HHHHhccCceEEEEcCCcCCchHHhCHHHHHHHHHHHHHH
Confidence 4568899999999999876653 4566666545678899999999999999999999999974
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=100.00 E-value=7.2e-32 Score=206.72 Aligned_cols=249 Identities=15% Similarity=0.125 Sum_probs=149.4
Q ss_pred CCceEEEecCCCCChhhHHH------hhhhc--CCceEEEecCCCCCCCCCCCC------CCcccc----hHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQR------ILPYL--NHHRVIMFDLVCAGSVNPDYF------DFRRYT----TLDAYVDDLL 77 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~------~~~~l--~g~~v~~~d~~g~G~s~~~~~------~~~~~~----~~~~~~~~~~ 77 (264)
.+|+||++||+++++..|.. ++..| +||+|+++|+||||.|+.+.. ....++ ...++.+++.
T Consensus 57 ~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~ 136 (377)
T d1k8qa_ 57 RRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATID 136 (377)
T ss_dssp TCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHH
T ss_pred CCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHH
Confidence 35799999999999999953 56677 999999999999999964211 011111 1345666777
Q ss_pred HHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCC---Cc---cHHHH-------------
Q 024681 78 NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG---GF---EEAEI------------- 138 (264)
Q Consensus 78 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~---~~---~~~~~------------- 138 (264)
.+++..+.++++++||||||.+++.+|.++|+.+++++++.............. .. .....
T Consensus 137 ~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (377)
T d1k8qa_ 137 FILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHH 216 (377)
T ss_dssp HHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCC
T ss_pred HHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchh
Confidence 778888999999999999999999999999999988887765432211111100 00 00000
Q ss_pred --HHHHHHHHhh---h----hhhh---hhcccccCC-------------CCChHHHHHHHHhhc-----ccCc-hhhhhh
Q 024681 139 --DKVFRAMEAN---Y----EAWA---YGYAPLAVG-------------ADVPAAVREFSRTLF-----NMRP-DISLFV 187 (264)
Q Consensus 139 --~~~~~~~~~~---~----~~~~---~~~~~~~~~-------------~~~~~~~~~~~~~~~-----~~~~-~~~~~~ 187 (264)
.......... . .... ......... .........+..... ..+. ......
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T d1k8qa_ 217 FFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNM 296 (377)
T ss_dssp HHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHH
T ss_pred HHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcccccHHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhh
Confidence 0000000000 0 0000 000000000 000000011110000 0000 000001
Q ss_pred hhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCc---ccccChhcHHHHHHHHhcC
Q 024681 188 SKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHL---PHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 188 ~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~---~~~~~~~~~~~~i~~fl~~ 264 (264)
............++++++|+|+|+|++|.+++++..+++.+.+++..+.++++++||+ .-.+.+++|.+.|.+||++
T Consensus 297 ~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 297 MHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred hhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHHHHCCCCeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 1111122233457789999999999999999999999999999985578899999997 3346689999999999974
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=8.1e-33 Score=202.10 Aligned_cols=99 Identities=11% Similarity=0.160 Sum_probs=89.6
Q ss_pred CceEEEecCCCCChhhHHHhhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEe
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVG 92 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 92 (264)
.|||||+||++++...|..+++.| .+|+|+++|+||||.|..+ ..+ +++++++++.++++.++ ++++|+|
T Consensus 2 ~~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~----~~~-~~~~~~~~l~~~l~~l~-~~~~lvG 75 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRP----LWE-QVQGFREAVVPIMAKAP-QGVHLIC 75 (268)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSC----HHH-HHHHHHHHHHHHHHHCT-TCEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCc----ccc-CHHHHHHHHHHHHhccC-CeEEEEc
Confidence 367999999999999999999988 3799999999999999753 345 49999999999999998 9999999
Q ss_pred cChhHHHHHHHHHhCCC-ccceeEEecCCC
Q 024681 93 HSVSAMIGLLASIRRPD-LFTKLILIGASP 121 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 121 (264)
|||||.+|+.+|.++|+ +|+++|+++++.
T Consensus 76 hS~GG~ia~~~a~~~p~~~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 76 YSQGGLVCRALLSVMDDHNVDSFISLSSPQ 105 (268)
T ss_dssp ETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred cccHHHHHHHHHHHCCccccceEEEECCCC
Confidence 99999999999999998 699999999753
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.97 E-value=2.8e-30 Score=191.37 Aligned_cols=220 Identities=15% Similarity=0.122 Sum_probs=137.4
Q ss_pred CCcceeeEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCC-CCCCCCCCCCcccchHHHHHHH
Q 024681 2 GDLLEALHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCA-GSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 2 g~~~~~~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
|..+....|...++ .+++||++||++++...|..+++.| +||+|+++|+||| |.|+.. ...++ +.++.+|
T Consensus 14 g~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~---~~~~~-~~~~~~d 89 (302)
T d1thta_ 14 GQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGS---IDEFT-MTTGKNS 89 (302)
T ss_dssp TEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC-----------CCC-HHHHHHH
T ss_pred CCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCc---ccCCC-HHHHHHH
Confidence 44444444444332 3468999999999999999999999 8999999999998 788653 33443 7788888
Q ss_pred HHHHHHHh---CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhhh
Q 024681 76 LLNILDTL---GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYEA 151 (264)
Q Consensus 76 ~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 151 (264)
+.++++.+ +.++++++||||||.+++.+|.. ..++++|+.+|.... ......... ....
T Consensus 90 l~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~---------------~~~~~~~~~~~~~~ 152 (302)
T d1thta_ 90 LCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNL---------------RDTLEKALGFDYLS 152 (302)
T ss_dssp HHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCH---------------HHHHHHHHSSCGGG
T ss_pred HHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccH---------------HHHHHHHHhhccch
Confidence 88777776 57899999999999999998864 358999998875431 111111100 0000
Q ss_pred hh-hhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 152 WA-YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 152 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
.. ..................+............ ....+.+.++++|+|+++|++|.++|++.++++.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i 223 (302)
T d1thta_ 153 LPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTL---------DSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHI 223 (302)
T ss_dssp SCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSH---------HHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTC
T ss_pred hhhhhccccccccccchhhHHHHHHHHHhHHHHH---------HHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhC
Confidence 00 0000000000000011111111111110000 0123456789999999999999999999999999998
Q ss_pred CCC-ceEEEecCCCCcccccChh
Q 024681 231 GGR-NTVELLKIEGHLPHLSAPA 252 (264)
Q Consensus 231 ~~~-~~~~~~~~~gH~~~~~~~~ 252 (264)
+.. +++++++|++|.+. |+++
T Consensus 224 ~s~~~kl~~~~g~~H~l~-e~~~ 245 (302)
T d1thta_ 224 RTGHCKLYSLLGSSHDLG-ENLV 245 (302)
T ss_dssp TTCCEEEEEETTCCSCTT-SSHH
T ss_pred CCCCceEEEecCCCcccc-cChH
Confidence 753 89999999999865 4453
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.97 E-value=1.6e-29 Score=191.59 Aligned_cols=219 Identities=14% Similarity=0.138 Sum_probs=141.9
Q ss_pred CCcceeeEEEEeCCC-CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 2 GDLLEALHVRVVGTG-DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 2 g~~~~~~~~~~~g~~-~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
|..+....+...+++ .|+||++||+.++...|..+...| +||+|+++|+||+|.|........ +.+.....+.+
T Consensus 115 g~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~~---~~~~~~~~v~d 191 (360)
T d2jbwa1 115 GIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAG---DYEKYTSAVVD 191 (360)
T ss_dssp TEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCS---CHHHHHHHHHH
T ss_pred CcccceEEEecCCCCCceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCccccccc---cHHHHHHHHHH
Confidence 333444444444554 489999999999988888888888 899999999999999964322122 35555555555
Q ss_pred HHHHh---CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhh
Q 024681 79 ILDTL---GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG 155 (264)
Q Consensus 79 ~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
++... +.++|.++||||||.+|+.+|...| +|+++|.+++........ .............
T Consensus 192 ~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~-----~~~~~~~~~~~~~---------- 255 (360)
T d2jbwa1 192 LLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWD-----LETPLTKESWKYV---------- 255 (360)
T ss_dssp HHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGG-----GSCHHHHHHHHHH----------
T ss_pred HHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHh-----hhhhhhhHHHHHh----------
Confidence 55443 4468999999999999999999887 599999998754321110 0000000000000
Q ss_pred cccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-c
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-N 234 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~ 234 (264)
........... ......+....+.+|++|+|+++|++|. +|.+.++.+.+.+++. .
T Consensus 256 -----~~~~~~~~~~~-----------------~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~ 312 (360)
T d2jbwa1 256 -----SKVDTLEEARL-----------------HVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHL 312 (360)
T ss_dssp -----TTCSSHHHHHH-----------------HHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGE
T ss_pred -----ccCCchHHHHH-----------------HHHhhcchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCe
Confidence 00000000000 0001122334567889999999999998 5889999999998753 5
Q ss_pred eEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 235 TVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 235 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++++++++|... +.+.+....+.+||.
T Consensus 313 ~l~~~~~g~H~~~-~~~~~~~~~i~dWl~ 340 (360)
T d2jbwa1 313 NLVVEKDGDHCCH-NLGIRPRLEMADWLY 340 (360)
T ss_dssp EEEEETTCCGGGG-GGTTHHHHHHHHHHH
T ss_pred EEEEECCCCcCCC-cChHHHHHHHHHHHH
Confidence 6778899999654 556666677777764
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=1e-27 Score=165.78 Aligned_cols=178 Identities=15% Similarity=0.084 Sum_probs=126.5
Q ss_pred ceEEEecCCCCChhh--HHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEec
Q 024681 18 RILVLAHGFGTDQSA--WQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGH 93 (264)
Q Consensus 18 p~vv~~hG~~~~~~~--~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 93 (264)
+.||++||++++... +..+++.| +||+|+++|+||+|.+. .+++.+.+...++..+ .+++|+||
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~-----------~~~~~~~l~~~~~~~~-~~~~lvGh 69 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPR-----------LEDWLDTLSLYQHTLH-ENTYLVAH 69 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCC-----------HHHHHHHHHTTGGGCC-TTEEEEEE
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcch-----------HHHHHHHHHHHHhccC-CCcEEEEe
Confidence 479999999988654 67788888 89999999999998652 6677777776665544 78999999
Q ss_pred ChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHH
Q 024681 94 SVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFS 173 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
||||.+++.++.++|+.....+++..++......... ....+. .
T Consensus 70 S~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~---------------------~~~~~~---~------------ 113 (186)
T d1uxoa_ 70 SLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ---------------------MLDEFT---Q------------ 113 (186)
T ss_dssp TTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG---------------------GGGGGT---C------------
T ss_pred chhhHHHHHHHHhCCccceeeEEeecccccccchhhh---------------------hhhhhh---c------------
Confidence 9999999999999987544444443322111100000 000000 0
Q ss_pred HhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccC---
Q 024681 174 RTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSA--- 250 (264)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~--- 250 (264)
.........++..|+++++|++|.++|.+.++.+++.++ +++++++++||+...+.
T Consensus 114 -------------------~~~~~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~~--~~~~~~~~~gH~~~~~~~~~ 172 (186)
T d1uxoa_ 114 -------------------GSFDHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQID--AALYEVQHGGHFLEDEGFTS 172 (186)
T ss_dssp -------------------SCCCHHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHTT--CEEEEETTCTTSCGGGTCSC
T ss_pred -------------------ccccccccccCCCCEEEEecCCCCCCCHHHHHHHHHHcC--CEEEEeCCCCCcCccccCcc
Confidence 000001112246799999999999999999999999884 78999999999876543
Q ss_pred hhcHHHHHHHHhcC
Q 024681 251 PAIVGPVIRRALSR 264 (264)
Q Consensus 251 ~~~~~~~i~~fl~~ 264 (264)
-.++.+.|.+||.|
T Consensus 173 ~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 173 LPIVYDVLTSYFSK 186 (186)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHcC
Confidence 25789999999975
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.96 E-value=4.3e-27 Score=164.21 Aligned_cols=166 Identities=17% Similarity=0.093 Sum_probs=123.1
Q ss_pred ceEEEecCC---CCC--hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH----hCCC
Q 024681 18 RILVLAHGF---GTD--QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT----LGVN 86 (264)
Q Consensus 18 p~vv~~hG~---~~~--~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 86 (264)
+++|++|+. |++ ...+..+++.| .||.|+.+|+||+|.|..... +.....+|+.+++++ ...+
T Consensus 36 ~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~------~~~~~~~D~~a~~~~~~~~~~~~ 109 (218)
T d2fuka1 36 VTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD------HGDGEQDDLRAVAEWVRAQRPTD 109 (218)
T ss_dssp EEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCC------TTTHHHHHHHHHHHHHHHHCTTS
T ss_pred cEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccC------cCcchHHHHHHHHHHHhhcccCc
Confidence 366888843 333 23466788888 899999999999999976421 123344555555444 3567
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP 166 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
+++++||||||.+++.+|.+. .++++|+++++....
T Consensus 110 ~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~------------------------------------------ 145 (218)
T d2fuka1 110 TLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW------------------------------------------ 145 (218)
T ss_dssp EEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB------------------------------------------
T ss_pred eEEEEEEcccchhhhhhhccc--ccceEEEeCCcccch------------------------------------------
Confidence 999999999999999998874 478999998742100
Q ss_pred HHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcc
Q 024681 167 AAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLP 246 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 246 (264)
+ ....++.+|+|+|+|++|.++|.+..+++.+.++..+++++++|++|++
T Consensus 146 ----------------------------~--~~~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f 195 (218)
T d2fuka1 146 ----------------------------D--FSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFF 195 (218)
T ss_dssp ----------------------------C--CTTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTC
T ss_pred ----------------------------h--hhccccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCC
Confidence 0 0011346799999999999999999999998887768899999999976
Q ss_pred cccChhcHHHHHHHHhcC
Q 024681 247 HLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 247 ~~~~~~~~~~~i~~fl~~ 264 (264)
. .+.+++.+.+.+|+++
T Consensus 196 ~-~~~~~l~~~~~~~v~~ 212 (218)
T d2fuka1 196 H-RKLIDLRGALQHGVRR 212 (218)
T ss_dssp T-TCHHHHHHHHHHHHGG
T ss_pred C-CCHHHHHHHHHHHHHH
Confidence 5 4446688888888864
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.95 E-value=5.4e-26 Score=170.25 Aligned_cols=262 Identities=18% Similarity=0.201 Sum_probs=176.2
Q ss_pred CCCcc--eeeEEEEeCC----CCceEEEecCCCCChh---hHHHhh---hhc--CCceEEEecCCCCCCCC--CCCCC--
Q 024681 1 MGDLL--EALHVRVVGT----GDRILVLAHGFGTDQS---AWQRIL---PYL--NHHRVIMFDLVCAGSVN--PDYFD-- 62 (264)
Q Consensus 1 ~g~~~--~~~~~~~~g~----~~p~vv~~hG~~~~~~---~~~~~~---~~l--~g~~v~~~d~~g~G~s~--~~~~~-- 62 (264)
+|+.+ -++.|+.+|+ +.++||++|++.++.. .|..++ +.| ..|-||++|..|.|.++ +...+
T Consensus 22 ~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~ 101 (376)
T d2vata1 22 SGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPD 101 (376)
T ss_dssp TSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTT
T ss_pred CCCCcCCceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcc
Confidence 35665 4789999996 3468999999887763 345554 356 89999999999887543 21111
Q ss_pred ----------CcccchHHHHHHHHHHHHHHhCCCeE-EEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCC------
Q 024681 63 ----------FRRYTTLDAYVDDLLNILDTLGVNRC-AYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN------ 125 (264)
Q Consensus 63 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~------ 125 (264)
...+ ++.|+++....+++++|++++ .++|.||||+.|+.+|..+|+.|+++|.+++++....
T Consensus 102 ~~~~~~yg~~FP~~-ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~ 180 (376)
T d2vata1 102 AEGQRPYGAKFPRT-TIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWF 180 (376)
T ss_dssp TC--CBCGGGCCCC-CHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHH
T ss_pred cccCCcccccCCcc-hhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHH
Confidence 1123 589999999999999999997 5789999999999999999999999999998754311
Q ss_pred ---------CCCCCC------CccHHHHHHHHHHH---HhhhhhhhhhcccccCCC------------------------
Q 024681 126 ---------DEDYHG------GFEEAEIDKVFRAM---EANYEAWAYGYAPLAVGA------------------------ 163 (264)
Q Consensus 126 ---------~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------------------------ 163 (264)
++.|.. ......+....... ......+...+.......
T Consensus 181 ~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~ 260 (376)
T d2vata1 181 ETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHR 260 (376)
T ss_dssp HHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC------------------------
T ss_pred HHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccccccccc
Confidence 111111 11111222111111 111222322222111000
Q ss_pred --CChHHHHHHH-----HhhcccCchhhhhhhhhhcCC--------ccccccCCcccCEEEEecCCCCCcchhhHHHHHH
Q 024681 164 --DVPAAVREFS-----RTLFNMRPDISLFVSKTVFDT--------DLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR 228 (264)
Q Consensus 164 --~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 228 (264)
.....++.+. +.....++..+..+.+.+... ++.+.+++|++|+|+|.++.|.+.|++..+++++
T Consensus 261 ~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~ 340 (376)
T d2vata1 261 AGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGR 340 (376)
T ss_dssp ---CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHH
Confidence 0001122222 223344555555555554433 3445689999999999999999999999999999
Q ss_pred HcCCCceEEEec-CCCCcccccChhcHHHHHHHHhcC
Q 024681 229 HLGGRNTVELLK-IEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 229 ~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+++ +++.+++ ..||..++..++.+.+.|++||++
T Consensus 341 ~l~~-a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 341 SIPN-SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp HSTT-EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred hcCC-CeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 9999 8999998 589987777899999999999986
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.95 E-value=4.1e-28 Score=178.08 Aligned_cols=214 Identities=15% Similarity=0.133 Sum_probs=143.5
Q ss_pred CCCceEEEecCC--CCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH-HHHHhCCCeEEE
Q 024681 15 TGDRILVLAHGF--GTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN-ILDTLGVNRCAY 90 (264)
Q Consensus 15 ~~~p~vv~~hG~--~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 90 (264)
++.|++||+||+ +++...|..+++.| .+++|+++|+||||.|+...... ...+++++++++.+ +++..+..+++|
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~-~~~s~~~~a~~~~~~i~~~~~~~P~vL 136 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTAL-LPADLDTALDAQARAILRAAGDAPVVL 136 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCC-EESSHHHHHHHHHHHHHHHHTTSCEEE
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCCCCCCCCcccc-ccCCHHHHHHHHHHHHHHhcCCCceEE
Confidence 356899999995 56778999999999 99999999999999987543222 22359999998765 566777789999
Q ss_pred EecChhHHHHHHHHHhC----CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh
Q 024681 91 VGHSVSAMIGLLASIRR----PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP 166 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
+||||||.+|+.+|.+. ++.|.++|++++.+.... ............. . ..........
T Consensus 137 ~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~----------~~~~~~~~~~~~~---~----~~~~~~~~~~ 199 (283)
T d2h7xa1 137 LGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQ----------EPIEVWSRQLGEG---L----FAGELEPMSD 199 (283)
T ss_dssp EEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCC----------HHHHHTHHHHHHH---H----HHTCSSCCCH
T ss_pred EEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccc----------cchhhhhhhhHHH---h----hccccccccc
Confidence 99999999999999865 457999999998543211 0111111100000 0 0001111111
Q ss_pred HHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcc
Q 024681 167 AAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLP 246 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 246 (264)
..+..... ....... .....+++|+++++|++|..++.+....+.+..+...+++.++ ++|+.
T Consensus 200 ~~l~a~~~------------~~~~~~~----~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~-G~H~~ 262 (283)
T d2h7xa1 200 ARLLAMGR------------YARFLAG----PRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVP-GDHFT 262 (283)
T ss_dssp HHHHHHHH------------HHHHHHS----CCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTH
T ss_pred HHHHHHHH------------HHHHHhh----ccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEc-CCCcc
Confidence 11111110 0011111 1235679999999999999998887777777776646889999 58985
Q ss_pred c-ccChhcHHHHHHHHhc
Q 024681 247 H-LSAPAIVGPVIRRALS 263 (264)
Q Consensus 247 ~-~~~~~~~~~~i~~fl~ 263 (264)
+ .++++.+++.|.+||+
T Consensus 263 ml~e~~~~vA~~i~~~L~ 280 (283)
T d2h7xa1 263 MMRDHAPAVAEAVLSWLD 280 (283)
T ss_dssp HHHTTHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHH
Confidence 5 5679999999999996
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=8.3e-26 Score=162.19 Aligned_cols=202 Identities=13% Similarity=0.048 Sum_probs=128.5
Q ss_pred EEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHH-------HHHHHHH
Q 024681 11 RVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD-------DLLNILD 81 (264)
Q Consensus 11 ~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~-------~~~~~~~ 81 (264)
...++++|+||++||++++...|..+++.| +||.|+++|+||||.|.................+ ++..++.
T Consensus 18 ~~p~~~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (238)
T d1ufoa_ 18 RIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAE 97 (238)
T ss_dssp EEESSCCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhh
Confidence 333455689999999999999999999999 8999999999999998643211111111222222 2222222
Q ss_pred ---HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc
Q 024681 82 ---TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP 158 (264)
Q Consensus 82 ---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
..+..++.++|+|+||.+++.++..+|+ +++++.+.+...............
T Consensus 98 ~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 152 (238)
T d1ufoa_ 98 EAERRFGLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSGFPMKLPQGQVVED------------------------ 152 (238)
T ss_dssp HHHHHHCCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCSSCCCCCTTCCCCC------------------------
T ss_pred hccccCCceEEEEEecccHHHHHHHHhcCcc-hhheeeeeeecccccccccccccc------------------------
Confidence 2244799999999999999999999986 555554444322211111100000
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC-----C
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG-----R 233 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~ 233 (264)
....... . ...........++|+++++|++|.++|.+..+++.+.+.. .
T Consensus 153 -------~~~~~~~-~------------------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 206 (238)
T d1ufoa_ 153 -------PGVLALY-Q------------------APPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGR 206 (238)
T ss_dssp -------HHHHHHH-H------------------SCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCC
T ss_pred -------ccccchh-h------------------hhhhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCce
Confidence 0000000 0 0000011122367999999999999999999998887632 1
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.++..++|+||.+.-+.-+...+.+.+||+
T Consensus 207 ~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 207 LARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp EEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCccCHHHHHHHHHHHHHHhc
Confidence 577889999998765555666777777775
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=8.2e-26 Score=169.03 Aligned_cols=227 Identities=12% Similarity=0.034 Sum_probs=142.7
Q ss_pred cceeeEEEEeCCCC-ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcc--------------c
Q 024681 4 LLEALHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRR--------------Y 66 (264)
Q Consensus 4 ~~~~~~~~~~g~~~-p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~--------------~ 66 (264)
.+....+...++++ |+||++||++++...|...+..| +||.|+++|+||+|.|......... .
T Consensus 68 ~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 147 (318)
T d1l7aa_ 68 RITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDT 147 (318)
T ss_dssp EEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTT
T ss_pred EEEEEEEecCCCCCceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhhcchhhchhhhhh
Confidence 34444455556543 89999999999999999999888 9999999999999999653211110 0
Q ss_pred chHHHHHHHHHHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHH
Q 024681 67 TTLDAYVDDLLNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDK 140 (264)
Q Consensus 67 ~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
........|....++.+ ...++.++|+|+||..++..+...+. +.+++...+.... ...
T Consensus 148 ~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~--------------~~~ 212 (318)
T d1l7aa_ 148 YYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN--------------FER 212 (318)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC--------------HHH
T ss_pred hhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEecccccc--------------HHH
Confidence 01333344444444433 22478999999999999999998875 6676666553221 000
Q ss_pred HHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcch
Q 024681 141 VFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV 220 (264)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 220 (264)
...... . .. ......+..... ...............+....++++++|+|+++|++|.++|+
T Consensus 213 ~~~~~~-----------~----~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~ 274 (318)
T d1l7aa_ 213 AIDVAL-----------E----QP-YLEINSFFRRNG--SPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPP 274 (318)
T ss_dssp HHHHCC-----------S----TT-TTHHHHHHHHSC--CHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCH
T ss_pred Hhhccc-----------c----cc-cchhhhhhhccc--cccccccccccccccccccccccCCCCEEEEEECCCCCcCH
Confidence 000000 0 00 000000000000 00011111111112233344667899999999999999999
Q ss_pred hhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 221 SVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+.+..+.+.++..+++++++++||....+..+++.+.+.++|+
T Consensus 275 ~~~~~~~~~l~~~~~l~~~~~~gH~~~~~~~~~~~~fl~~~Lk 317 (318)
T d1l7aa_ 275 STVFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFKQILK 317 (318)
T ss_dssp HHHHHHHHHCCSSEEEEEETTCCSSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCcEEEEECCCCCCCcHHHHHHHHHHHHHhCC
Confidence 9999999999865899999999998776666777777777764
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=3.7e-26 Score=156.26 Aligned_cols=167 Identities=19% Similarity=0.196 Sum_probs=133.6
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecCh
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSV 95 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 95 (264)
|||||+||++++...|..+.+.| +||.++.+|.+|++.+... ..+ +.+++++++.+++++.+.++++++||||
T Consensus 3 ~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~----~~~-~~~~l~~~i~~~~~~~~~~~v~lvGHSm 77 (179)
T d1ispa_ 3 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGT----NYN-NGPVLSRFVQKVLDETGAKKVDIVAHSM 77 (179)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCC----HHH-HHHHHHHHHHHHHHHHCCSCEEEEEETH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCccccccc----cch-hhhhHHHHHHHHHHhcCCceEEEEeecC
Confidence 57899999999999999999999 8999999999999988653 222 4778888999999999999999999999
Q ss_pred hHHHHHHHHHhC--CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHH
Q 024681 96 SAMIGLLASIRR--PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFS 173 (264)
Q Consensus 96 Gg~~a~~~a~~~--p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
||.++..++.++ |++|+++|+++++.......
T Consensus 78 GG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~---------------------------------------------- 111 (179)
T d1ispa_ 78 GGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK---------------------------------------------- 111 (179)
T ss_dssp HHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB----------------------------------------------
T ss_pred cCHHHHHHHHHcCCchhhCEEEEECCCCCCchhh----------------------------------------------
Confidence 999999999887 57899999999752210000
Q ss_pred HhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhc
Q 024681 174 RTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAI 253 (264)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 253 (264)
..........+|++.++|..|.++++..+ .++. .+.+.+++.+|.....+| +
T Consensus 112 ---------------------~l~~~~~~~~~~~~~i~~~~D~~v~~~~~-----~l~~-~~~~~~~~~~H~~l~~~~-~ 163 (179)
T d1ispa_ 112 ---------------------ALPGTDPNQKILYTSIYSSADMIVMNYLS-----RLDG-ARNVQIHGVGHIGLLYSS-Q 163 (179)
T ss_dssp ---------------------CCCCSCTTCCCEEEEEEETTCSSSCHHHH-----CCBT-SEEEEESSCCTGGGGGCH-H
T ss_pred ---------------------hcCCcccccCceEEEEEecCCcccCchhh-----cCCC-ceEEEECCCCchhhccCH-H
Confidence 00000122367999999999999987643 4666 788899999999888877 5
Q ss_pred HHHHHHHHhc
Q 024681 254 VGPVIRRALS 263 (264)
Q Consensus 254 ~~~~i~~fl~ 263 (264)
+.+.+.+||+
T Consensus 164 v~~~i~~~L~ 173 (179)
T d1ispa_ 164 VNSLIKEGLN 173 (179)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 8899999986
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.9e-27 Score=172.17 Aligned_cols=93 Identities=10% Similarity=0.081 Sum_probs=74.5
Q ss_pred CCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHH-HHHhCCCeEEEEecC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNI-LDTLGVNRCAYVGHS 94 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~S 94 (264)
++++|||+||++++...|+.+++.| +++|+++|+||+|.|+ ++++.++++.+. .+..+.++++|+|||
T Consensus 24 ~~~Pl~l~Hg~~gs~~~~~~l~~~L-~~~v~~~d~~g~~~~~----------~~~~~a~~~~~~~~~~~~~~~~~lvGhS 92 (286)
T d1xkta_ 24 SERPLFLVHPIEGSTTVFHSLASRL-SIPTYGLQCTRAAPLD----------SIHSLAAYYIDCIRQVQPEGPYRVAGYS 92 (286)
T ss_dssp CSCCEEEECCTTCCCGGGHHHHHTC-SSCEEEECCCTTSCCS----------CHHHHHHHHHHHHHHHCCSSCCEEEEET
T ss_pred CCCeEEEECCCCccHHHHHHHHHHc-CCeEEEEeCCCCCCCC----------CHHHHHHHHHHHHHHhcCCCceEEeecC
Confidence 4467999999999999999999988 5789999999999885 377777777654 455567899999999
Q ss_pred hhHHHHHHHHHhCCCccceeEEecC
Q 024681 95 VSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
|||.+|+.+|.++|+++.++++++.
T Consensus 93 ~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 93 YGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp HHHHHHHHHHHHHHHC------CCE
T ss_pred CccHHHHHHHHHHHHcCCCceeEEE
Confidence 9999999999999999888777664
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=6.6e-27 Score=167.11 Aligned_cols=216 Identities=11% Similarity=0.047 Sum_probs=128.6
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (264)
.+++. .++++++|||+||++++...|..+++.|.+|.|+++|++|+|.+ .+++++++.+ ..+.+
T Consensus 8 ~~~~~-~~~~~~~l~~lhg~~g~~~~~~~la~~L~~~~v~~~~~~g~~~~------------a~~~~~~i~~---~~~~~ 71 (230)
T d1jmkc_ 8 DVTIM-NQDQEQIIFAFPPVLGYGLMYQNLSSRLPSYKLCAFDFIEEEDR------------LDRYADLIQK---LQPEG 71 (230)
T ss_dssp TEEEE-STTCSEEEEEECCTTCCGGGGHHHHHHCTTEEEEEECCCCSTTH------------HHHHHHHHHH---HCCSS
T ss_pred eEEee-cCCCCCeEEEEcCCCCCHHHHHHHHHHCCCCEEeccCcCCHHHH------------HHHHHHHHHH---hCCCC
Confidence 34443 33345799999999999999999999997799999999988632 4444444332 23457
Q ss_pred eEEEEecChhHHHHHHHHHhCCCcc---ceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLF---TKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v---~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
+++|+||||||.+|+.+|.++|+++ ..++.+++........... ......... ........ ...
T Consensus 72 ~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~-~~~ 138 (230)
T d1jmkc_ 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDG-RTVESDVEA-----------LMNVNRDN-EAL 138 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC---------CCHHH-----------HHHHTTTC-SGG
T ss_pred cEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhh-hhhhhhhhh-----------hhhccccc-ccc
Confidence 8999999999999999999877654 4445544432211111000 000000000 00000000 000
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCC
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG 243 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 243 (264)
........+.... ...... .........+++|+++|+|++|..++.... .+.+..+...+++.++ +|
T Consensus 139 ~~~~~~~~~~~~~--------~~~~~~---~~~~~~~~~i~~p~l~i~g~~D~~~~~~~~-~w~~~~~~~~~~~~i~-g~ 205 (230)
T d1jmkc_ 139 NSEAVKHGLKQKT--------HAFYSY---YVNLISTGQVKADIDLLTSGADFDIPEWLA-SWEEATTGAYRMKRGF-GT 205 (230)
T ss_dssp GSHHHHHHHHHHH--------HHHHHH---HHHCCCCSCBSSEEEEEECSSCCCCCTTEE-CSGGGBSSCEEEEECS-SC
T ss_pred ccHHHHHHHHHHH--------HHHHHh---hhcccccccccCcceeeeecCCcccchhHH-HHHHhccCCcEEEEEc-CC
Confidence 0011111111110 000000 111233467899999999999999886543 3445554437888898 69
Q ss_pred CcccccCh--hcHHHHHHHHhcC
Q 024681 244 HLPHLSAP--AIVGPVIRRALSR 264 (264)
Q Consensus 244 H~~~~~~~--~~~~~~i~~fl~~ 264 (264)
|+.++++| +++++.|.+||++
T Consensus 206 H~~ml~~~~~~~va~~I~~~L~~ 228 (230)
T d1jmkc_ 206 HAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp GGGTTSHHHHHHHHHHHHHHHTC
T ss_pred ChhhcCCccHHHHHHHHHHHHhh
Confidence 99888876 8999999999975
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.93 E-value=3.9e-24 Score=159.02 Aligned_cols=261 Identities=16% Similarity=0.217 Sum_probs=173.3
Q ss_pred CCcc--eeeEEEEeCC----CCceEEEecCCCCChhh---------HHHhh---hhc--CCceEEEecCCCCCCCC--CC
Q 024681 2 GDLL--EALHVRVVGT----GDRILVLAHGFGTDQSA---------WQRIL---PYL--NHHRVIMFDLVCAGSVN--PD 59 (264)
Q Consensus 2 g~~~--~~~~~~~~g~----~~p~vv~~hG~~~~~~~---------~~~~~---~~l--~g~~v~~~d~~g~G~s~--~~ 59 (264)
|+++ -++.|+.+|. +.++||++|++.++... |..++ ..| ..|.|+++|..|.|.++ +.
T Consensus 18 G~~l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~ 97 (357)
T d2b61a1 18 GGKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPS 97 (357)
T ss_dssp SCEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTT
T ss_pred CCccCCceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcC
Confidence 5555 4789999996 34799999998887543 45554 355 78999999999976642 21
Q ss_pred CCC----------CcccchHHHHHHHHHHHHHHhCCCeE-EEEecChhHHHHHHHHHhCCCccceeEEecCCCCCC----
Q 024681 60 YFD----------FRRYTTLDAYVDDLLNILDTLGVNRC-AYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL---- 124 (264)
Q Consensus 60 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~---- 124 (264)
..+ ...+ ++.|+++....+++++|++++ .++|.||||+.|+.+|.++|+.|+++|.+++++...
T Consensus 98 s~~p~tg~~~g~~FP~i-ti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~ 176 (357)
T d2b61a1 98 SINPQTGKPYGSQFPNI-VVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAI 176 (357)
T ss_dssp SBCTTTSSBCGGGCCCC-CHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHH
T ss_pred CCCCCCCCCCCcccccc-hhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHH
Confidence 111 1223 599999999999999999998 567999999999999999999999999999865321
Q ss_pred -----------CCCCCCCC------ccHHHHH--HHHHHHH-hhhhhhhhhcccccCCCC----ChHHHHHHHH-----h
Q 024681 125 -----------NDEDYHGG------FEEAEID--KVFRAME-ANYEAWAYGYAPLAVGAD----VPAAVREFSR-----T 175 (264)
Q Consensus 125 -----------~~~~~~~~------~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----~ 175 (264)
.++.+..+ .+...+. +.+..+. .....+...+........ .....+.+.. .
T Consensus 177 ~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf 256 (357)
T d2b61a1 177 GFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKF 256 (357)
T ss_dssp HHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHH
Confidence 11111111 1111221 1111111 111122222222111111 0012222222 2
Q ss_pred hcccCchhhhhhhhhhcC-------CccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecC-CCC
Q 024681 176 LFNMRPDISLFVSKTVFD-------TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKI-EGH 244 (264)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~-~gH 244 (264)
....++..+..+.+.+.. .+..+.+++|++|+|+|..+.|...|++..+.+++.+++. +++++++. .||
T Consensus 257 ~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GH 336 (357)
T d2b61a1 257 LERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGH 336 (357)
T ss_dssp HTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGG
T ss_pred HhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCc
Confidence 334566666555554432 3455678999999999999999999999999998888642 57888886 599
Q ss_pred cccccChhcHHHHHHHHhc
Q 024681 245 LPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 245 ~~~~~~~~~~~~~i~~fl~ 263 (264)
..++-..+++.+.|++||+
T Consensus 337 dafL~e~~~~~~~I~~fL~ 355 (357)
T d2b61a1 337 DAFLVDYDQFEKRIRDGLA 355 (357)
T ss_dssp GHHHHCHHHHHHHHHHHHH
T ss_pred cccCcCHHHHHHHHHHHHc
Confidence 8777788999999999996
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.93 E-value=1.7e-24 Score=161.28 Aligned_cols=264 Identities=14% Similarity=0.216 Sum_probs=167.0
Q ss_pred CCCcc--eeeEEEEeCC----CCceEEEecCCCCCh-------------hhHHHhh---hhc--CCceEEEecCCCCCCC
Q 024681 1 MGDLL--EALHVRVVGT----GDRILVLAHGFGTDQ-------------SAWQRIL---PYL--NHHRVIMFDLVCAGSV 56 (264)
Q Consensus 1 ~g~~~--~~~~~~~~g~----~~p~vv~~hG~~~~~-------------~~~~~~~---~~l--~g~~v~~~d~~g~G~s 56 (264)
+|+.+ -++.|+..|. +.++||++|++.++. ..|..++ +.| ..|.|+++|..|.|.|
T Consensus 20 ~G~~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ 99 (362)
T d2pl5a1 20 NGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKG 99 (362)
T ss_dssp TSCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSS
T ss_pred CCCCcCCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCccc
Confidence 35555 4789999985 346999999988874 2355554 255 8899999999998876
Q ss_pred CCCC--CC---Cccc------chHHHHHHHHHHHHHHhCCCeEE-EEecChhHHHHHHHHHhCCCccceeEEecCCCCCC
Q 024681 57 NPDY--FD---FRRY------TTLDAYVDDLLNILDTLGVNRCA-YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL 124 (264)
Q Consensus 57 ~~~~--~~---~~~~------~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 124 (264)
+.+. .. ...| .++.|+++....+++++|++++. ++|.||||+.|+.+|.++|+.|+++|.+++++...
T Consensus 100 ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s 179 (362)
T d2pl5a1 100 SSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHS 179 (362)
T ss_dssp SSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCC
T ss_pred ccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccC
Confidence 3211 11 1111 25889999999999999999887 67999999999999999999999999999865421
Q ss_pred ---------------CCCCCCC-----CccHHHHHH--HHHHHH-hhhhhhhhhcccccCCCCC---hHHHHHHH-----
Q 024681 125 ---------------NDEDYHG-----GFEEAEIDK--VFRAME-ANYEAWAYGYAPLAVGADV---PAAVREFS----- 173 (264)
Q Consensus 125 ---------------~~~~~~~-----~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~----- 173 (264)
.++.+.. ..+...+.. ....+. .....+...+......... ...++.+.
T Consensus 180 ~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~ 259 (362)
T d2pl5a1 180 AMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGE 259 (362)
T ss_dssp HHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTC
T ss_pred HHHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHH
Confidence 1111111 111111111 110000 0111111122111110000 00000111
Q ss_pred HhhcccCchhhhhhhhhhcCCc------cccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecC-CC
Q 024681 174 RTLFNMRPDISLFVSKTVFDTD------LRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKI-EG 243 (264)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~-~g 243 (264)
+.....++..+..+.+.+...+ +.+.+++|+.|+|+|..+.|.++|++..+++++.+++. +++++++. .|
T Consensus 260 k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~G 339 (362)
T d2pl5a1 260 SFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEG 339 (362)
T ss_dssp CSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBS
T ss_pred HHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence 0111223333333333333222 34558999999999999999999999999999998753 46776754 89
Q ss_pred CcccccChhcHHHHHHHHhcC
Q 024681 244 HLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 244 H~~~~~~~~~~~~~i~~fl~~ 264 (264)
|..++...+++.+.|++||+.
T Consensus 340 HdaFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 340 HDSFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp SGGGGSCCHHHHHHHHHHHHC
T ss_pred cchhccCHHHHHHHHHHHHcC
Confidence 998888899999999999974
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.92 E-value=1.9e-25 Score=162.32 Aligned_cols=220 Identities=15% Similarity=0.143 Sum_probs=137.0
Q ss_pred CCcceeeEEEEeCCC--CceEEEecCC--CCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCC--CCccc--chHHH
Q 024681 2 GDLLEALHVRVVGTG--DRILVLAHGF--GTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYF--DFRRY--TTLDA 71 (264)
Q Consensus 2 g~~~~~~~~~~~g~~--~p~vv~~hG~--~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~--~~~~~--~~~~~ 71 (264)
|..+...-|...+.. .|+||++||. +.....|...+..| +||.|+++|+||++.+..... ....+ ..+++
T Consensus 22 G~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~~~~~~~~~~~~D 101 (260)
T d2hu7a2 22 GSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELED 101 (260)
T ss_dssp SCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHH
T ss_pred CCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccccccccccchhhhhh
Confidence 555555555555432 3789999983 34456677777777 899999999999877643100 01111 11233
Q ss_pred HHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhh
Q 024681 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEA 151 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
+.+.+..+.+....+++.++|+|+||.+++.++..+|+.+++++..++..... ..... ...
T Consensus 102 ~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~---------------~~~~~----~~~ 162 (260)
T d2hu7a2 102 VSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWE---------------EMYEL----SDA 162 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHH---------------HHHHT----CCH
T ss_pred hcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhh---------------hhhcc----ccc
Confidence 33333333333344689999999999999999999999999999888753310 00000 000
Q ss_pred hhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 152 WAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
....+............ ...+....+.++++|+|+++|++|.++|.+.+..+.+.+.
T Consensus 163 ----------------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~ 219 (260)
T d2hu7a2 163 ----------------AFRNFIEQLTGGSREIM-------RSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELL 219 (260)
T ss_dssp ----------------HHHHHHHHHHCSCHHHH-------HHTCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHH
T ss_pred ----------------ccccccccccccccccc-------cccchhhcccccCCCceeeecccCceecHHHHHHHHHHHH
Confidence 00001111111111100 0112233456778999999999999999999998887663
Q ss_pred C---CceEEEecCCCCccc-ccChhcHHHHHHHHhc
Q 024681 232 G---RNTVELLKIEGHLPH-LSAPAIVGPVIRRALS 263 (264)
Q Consensus 232 ~---~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~ 263 (264)
+ .++++++|+++|.+. .++..++.+.+.+||+
T Consensus 220 ~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~ 255 (260)
T d2hu7a2 220 ARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLA 255 (260)
T ss_dssp HTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHH
T ss_pred HCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHH
Confidence 2 278999999999654 3555677777778875
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.91 E-value=5e-23 Score=154.10 Aligned_cols=225 Identities=14% Similarity=0.054 Sum_probs=135.7
Q ss_pred CCcceeeEEEEeCC-C-CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCC---------------
Q 024681 2 GDLLEALHVRVVGT-G-DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDF--------------- 63 (264)
Q Consensus 2 g~~~~~~~~~~~g~-~-~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~--------------- 63 (264)
|..+....|...+. + .|+||++||++.+...+....... +||.|+++|+||+|.|.......
T Consensus 65 G~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~ 144 (322)
T d1vlqa_ 65 GQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFM 144 (322)
T ss_dssp GCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSST
T ss_pred CcEEEEEEEeccCCCCCccEEEEecCCCCCcCcHHHHHHHHhCCCEEEEeeccccCCCCCCccccccccccccccccchh
Confidence 44455555555543 3 379999999988877776555445 99999999999999985421110
Q ss_pred -------cccchHHHHHHHHHHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCC
Q 024681 64 -------RRYTTLDAYVDDLLNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH 130 (264)
Q Consensus 64 -------~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~ 130 (264)
..+ .......|....++.+ +.+++.++|+|+||.+++.++...| ++++++...+.....
T Consensus 145 ~~g~~~~~~~-~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~~------ 216 (322)
T d1vlqa_ 145 TRGILDPRTY-YYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHF------ 216 (322)
T ss_dssp TTTTTCTTTC-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCH------
T ss_pred hhchhhhhhh-hhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCccccH------
Confidence 111 1233445555555544 2247999999999999998888776 588888776532210
Q ss_pred CCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEE
Q 024681 131 GGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVII 210 (264)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 210 (264)
......... ........+... ...............+....+.++++|+|++
T Consensus 217 --------~~~~~~~~~----------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~~~a~~i~~P~Lv~ 268 (322)
T d1vlqa_ 217 --------RRAVQLVDT----------------HPYAEITNFLKT----HRDKEEIVFRTLSYFDGVNFAARAKIPALFS 268 (322)
T ss_dssp --------HHHHHHCCC----------------TTHHHHHHHHHH----CTTCHHHHHHHHHTTCHHHHHTTCCSCEEEE
T ss_pred --------HHHHhhccc----------------cchhhHHhhhhc----CcchhhhHHHHhhhhhHHHHHhcCCCCEEEE
Confidence 000000000 000000000000 0000111111111223444567789999999
Q ss_pred ecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccccc-ChhcHHHHHHHHh
Q 024681 211 QTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS-APAIVGPVIRRAL 262 (264)
Q Consensus 211 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl 262 (264)
+|++|.++|++.+..+.+.++..++++++|+++|....+ +.++..+.+.++|
T Consensus 269 ~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~~~~~~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 269 VGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGSFQAVEQVKFLKKLF 321 (322)
T ss_dssp EETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCCccccCHHHHHHHHHHHh
Confidence 999999999999999999988658999999999954322 2344455555555
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.91 E-value=4.3e-23 Score=148.80 Aligned_cols=209 Identities=10% Similarity=0.034 Sum_probs=135.1
Q ss_pred eCCCCceEEEecC--CCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH-HhCCCeE
Q 024681 13 VGTGDRILVLAHG--FGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD-TLGVNRC 88 (264)
Q Consensus 13 ~g~~~p~vv~~hG--~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 88 (264)
.|.++|+|+|+|| .+++...|..+++.| ..+.|+++|+||+|.+++. .. +++++++++.+.+. ..+..++
T Consensus 38 ~g~~~~~l~c~~~~~~gg~~~~y~~La~~L~~~~~V~al~~pG~~~~e~~-----~~-s~~~~a~~~~~~i~~~~~~~P~ 111 (255)
T d1mo2a_ 38 DGPGEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPL-----PS-SMAAVAAVQADAVIRTQGDKPF 111 (255)
T ss_dssp CCSCSSEEEEECCCSSSCSGGGGHHHHHHHTTTCCEEEECCTTSSTTCCE-----ES-SHHHHHHHHHHHHHHTTSSSCE
T ss_pred CCCCCCeEEEECCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCcCCCCCC-----CC-CHHHHHHHHHHHHHHhCCCCCE
Confidence 4556789999998 467788999999999 8899999999999988542 11 59999999876664 4566899
Q ss_pred EEEecChhHHHHHHHHHhC---CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 89 AYVGHSVSAMIGLLASIRR---PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
+|+||||||.+|+.+|.+. .+++..++++++.+.. ........... ..............
T Consensus 112 ~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~----------~~~~~~~~~~~-------~~~~~~~~~~~~~~ 174 (255)
T d1mo2a_ 112 VVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPG----------HQDAMNAWLEE-------LTATLFDRETVRMD 174 (255)
T ss_dssp EEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSS----------HHHHHHHHHHH-------HHTTCC----CCCC
T ss_pred EEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCC----------CccchhhHHHH-------HHHHhhccccccCC
Confidence 9999999999999999865 4569999999985431 11111111111 11111111111111
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCc
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHL 245 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 245 (264)
...+..+.... .... .. ....+.+|++++.+++|...... ..+........+++.++ ++|+
T Consensus 175 ~~~l~a~~~~~---------~~~~---~~----~~~~~~~p~l~v~a~~~~~~~~~--~~w~~~~~~~~~~~~v~-G~H~ 235 (255)
T d1mo2a_ 175 DTRLTALGAYD---------RLTG---QW----RPRETGLPTLLVSAGEPMGPWPD--DSWKPTWPFEHDTVAVP-GDHF 235 (255)
T ss_dssp HHHHHHHHHHH---------HHHH---HC----CCCCCCCCEEEEECCSSSSCCTT--CCCCCCCCSSCEEEECC-SCCS
T ss_pred HHHHHHHHHHH---------HHHh---cC----CCccccceEEEeecCCCCCcchh--hHHHHhCCCCcEEEEEC-CCCc
Confidence 11111111110 0000 00 12457899999999887654332 23333344337888999 6998
Q ss_pred c-cccChhcHHHHHHHHhc
Q 024681 246 P-HLSAPAIVGPVIRRALS 263 (264)
Q Consensus 246 ~-~~~~~~~~~~~i~~fl~ 263 (264)
. +.++++++++.|.+||.
T Consensus 236 ~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 236 TMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp SCSSCCHHHHHHHHHHHHT
T ss_pred ccccccHHHHHHHHHHHhC
Confidence 4 45688999999999985
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.90 E-value=2.3e-22 Score=145.41 Aligned_cols=175 Identities=17% Similarity=0.161 Sum_probs=126.6
Q ss_pred eeeEEEEe-CCCC-ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVV-GTGD-RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~-g~~~-p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
..++|... ++++ |.||++||++++...+..+++.| .||.|+++|++|++.... ....++.+.+..+.+
T Consensus 39 ~~ly~P~~~~~g~~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~--------~~~~d~~~~~~~l~~ 110 (260)
T d1jfra_ 39 GTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPD--------SRGRQLLSALDYLTQ 110 (260)
T ss_dssp EEEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHH--------HHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCch--------hhHHHHHHHHHHHHh
Confidence 35666543 3333 79999999999999999999999 999999999998765421 012223333333333
Q ss_pred H------hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhh
Q 024681 82 T------LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG 155 (264)
Q Consensus 82 ~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
. ++.+++.++|||+||.+++.++...+ +++++|.+.+....
T Consensus 111 ~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~-------------------------------- 157 (260)
T d1jfra_ 111 RSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTD-------------------------------- 157 (260)
T ss_dssp TSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSC--------------------------------
T ss_pred hhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeeccccc--------------------------------
Confidence 2 23468999999999999999998886 58888887763110
Q ss_pred cccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHHHHcCCC-
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQRHLGGR- 233 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~- 233 (264)
..+.++++|+|+++|+.|.++|.+. .+.+.+.++..
T Consensus 158 ------------------------------------------~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~ 195 (260)
T d1jfra_ 158 ------------------------------------------KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSL 195 (260)
T ss_dssp ------------------------------------------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTS
T ss_pred ------------------------------------------ccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCC
Confidence 1123468899999999999999865 55666666542
Q ss_pred -ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 234 -NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 234 -~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+++.++|++|.........+.+.+..||+
T Consensus 196 ~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~ 226 (260)
T d1jfra_ 196 DKAYLELRGASHFTPNTSDTTIAKYSISWLK 226 (260)
T ss_dssp CEEEEEETTCCTTGGGSCCHHHHHHHHHHHH
T ss_pred CEEEEEECCCccCCCCCChHHHHHHHHHHHH
Confidence 578899999998776666677777777775
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.90 E-value=1.4e-23 Score=131.59 Aligned_cols=91 Identities=13% Similarity=0.044 Sum_probs=79.0
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
.+++|.+.|++ |||||+||. |..+.+.| ++|+|+++|+||||.|+.+ .+ +.+++++++.++++.++
T Consensus 11 ~~l~y~~~G~G-~pvlllHG~------~~~w~~~L~~~yrvi~~DlpG~G~S~~p-----~~-s~~~~a~~i~~ll~~L~ 77 (122)
T d2dsta1 11 LNLVFDRVGKG-PPVLLVAEE------ASRWPEALPEGYAFYLLDLPGYGRTEGP-----RM-APEELAHFVAGFAVMMN 77 (122)
T ss_dssp EEEEEEEECCS-SEEEEESSS------GGGCCSCCCTTSEEEEECCTTSTTCCCC-----CC-CHHHHHHHHHHHHHHTT
T ss_pred EEEEEEEEcCC-CcEEEEecc------cccccccccCCeEEEEEeccccCCCCCc-----cc-ccchhHHHHHHHHHHhC
Confidence 37899999987 589999984 34456778 9999999999999999753 24 48999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPD 109 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~ 109 (264)
+++++++||||||.+++++++..++
T Consensus 78 i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 78 LGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp CCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CCCcEEEEeCccHHHHHHHHhhccc
Confidence 9999999999999999999987543
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.89 E-value=1.5e-25 Score=167.57 Aligned_cols=231 Identities=11% Similarity=0.015 Sum_probs=127.2
Q ss_pred CCCceEEEecCCCCChhhHHH-------hhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 15 TGDRILVLAHGFGTDQSAWQR-------ILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~-------~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
+.+++|||+||++.+...|.. ++..+ +||+|+++|+||||.|... ...+ +..++.+++.+.++.+..
T Consensus 56 ~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~---~~~~-~~~~~~~~~~~~l~~~~~ 131 (318)
T d1qlwa_ 56 AKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATD---ISAI-NAVKLGKAPASSLPDLFA 131 (318)
T ss_dssp CCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCC---CHHH-HHHHTTSSCGGGSCCCBC
T ss_pred CCCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCc---cccC-CHHHHHHHHHHHHHHHhh
Confidence 345679999999999999965 34555 9999999999999999754 2233 255666666666655532
Q ss_pred --CeEEEEecChhHHHHHHHHHhCCCc-cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 86 --NRCAYVGHSVSAMIGLLASIRRPDL-FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 86 --~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
.+..++|||+||.++..++...+.. ...+++.++.+...... ................ ...........
T Consensus 132 ~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 203 (318)
T d1qlwa_ 132 AGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSM-PTPNPTVANLSKLAIK-------LDGTVLLSHSQ 203 (318)
T ss_dssp CCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGS-CSSCHHHHHHHHHHHH-------HTSEEEEEEGG
T ss_pred cccccccccccchhHHHHHHhhhcCccccceeeEeccccccccch-hhhhhhHHHHHHHHhh-------hccccchhhhc
Confidence 3677889999999988877665432 23333333322211110 0001111111111110 00000000000
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhh--hhhcCCccccccCCcccCEEEEecCCCCCcchhh-----HHHHHH----HcC
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVS--KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-----AEYLQR----HLG 231 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-----~~~~~~----~~~ 231 (264)
.. ........ . .+....... ..............+++|+|+++|++|.++|... .+.+.+ .-.
T Consensus 204 ~~---~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~ 277 (318)
T d1qlwa_ 204 SG---IYPFQTAA-M--NPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGG 277 (318)
T ss_dssp GT---THHHHHHH-H--CCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTC
T ss_pred cc---chhhhhhh-h--hhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCC
Confidence 00 00000000 0 000000000 0011122334456678999999999999998533 223333 234
Q ss_pred CCceEEEec-----CCCCcccccCh-hcHHHHHHHHhcC
Q 024681 232 GRNTVELLK-----IEGHLPHLSAP-AIVGPVIRRALSR 264 (264)
Q Consensus 232 ~~~~~~~~~-----~~gH~~~~~~~-~~~~~~i~~fl~~ 264 (264)
+ ++++.+| |+||+++.|.+ +++++.|.+||++
T Consensus 278 ~-~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~ 315 (318)
T d1qlwa_ 278 K-GQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGR 315 (318)
T ss_dssp C-EEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHH
T ss_pred C-cEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHh
Confidence 4 7888866 57899998875 8999999999974
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=9e-22 Score=139.69 Aligned_cols=179 Identities=10% Similarity=0.080 Sum_probs=119.1
Q ss_pred CCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCC---------C-----CCCCCCCcccchHHHHHHHHHH
Q 024681 15 TGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGS---------V-----NPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~---------s-----~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
+..++||++||+|++...|..+...+ .++.+++++-|.+.. + ............+++..+.+..
T Consensus 19 ~~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~~ 98 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKA 98 (229)
T ss_dssp CCSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHHH
Confidence 34568999999999999999888877 889999987653211 1 0000001111224555555555
Q ss_pred HHHHh-----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh
Q 024681 79 ILDTL-----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA 153 (264)
Q Consensus 79 ~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
+++.. +.++++++|+|+||.+|+.++.++|+++.++|.+++......
T Consensus 99 li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~---------------------------- 150 (229)
T d1fj2a_ 99 LIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA---------------------------- 150 (229)
T ss_dssp HHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG----------------------------
T ss_pred HhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccc----------------------------
Confidence 55443 346899999999999999999999999999999987321000
Q ss_pred hhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC-
Q 024681 154 YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG- 232 (264)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 232 (264)
.+. +......+.++|++++||++|.++|.+.+++..+.+..
T Consensus 151 -~~~-------------------------------------~~~~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~ 192 (229)
T d1fj2a_ 151 -SFP-------------------------------------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTL 192 (229)
T ss_dssp -GSC-------------------------------------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHH
T ss_pred -ccc-------------------------------------ccccccccccCceeEEEcCCCCeeCHHHHHHHHHHHHhc
Confidence 000 00000112367999999999999999888776665421
Q ss_pred ----CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 233 ----RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 233 ----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+++.++++.||.+..+ ..+.+.+||+
T Consensus 193 ~~~~~v~~~~~~g~gH~i~~~----~~~~~~~wL~ 223 (229)
T d1fj2a_ 193 VNPANVTFKTYEGMMHSSCQQ----EMMDVKQFID 223 (229)
T ss_dssp SCGGGEEEEEETTCCSSCCHH----HHHHHHHHHH
T ss_pred CCCCceEEEEeCCCCCccCHH----HHHHHHHHHH
Confidence 16888999999976433 2355666664
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.89 E-value=7.6e-22 Score=137.69 Aligned_cols=174 Identities=14% Similarity=0.056 Sum_probs=121.3
Q ss_pred CCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCC--CCCcccchHHH---HHHHHHH----HHHHhC
Q 024681 15 TGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDY--FDFRRYTTLDA---YVDDLLN----ILDTLG 84 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~---~~~~~~~----~~~~~~ 84 (264)
+.+|+||++||++++...|..+.+.+ +++.|++++.+..+...... .......+.++ ..+++.. +.+..+
T Consensus 12 ~~~P~vi~lHG~g~~~~~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYK 91 (202)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 35689999999999999999999999 99999999865443321100 00011111222 2233333 333434
Q ss_pred --CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
..++.++|+|+||.+++.++.++|+++.+++++++....
T Consensus 92 ~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~--------------------------------------- 132 (202)
T d2h1ia1 92 FDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPR--------------------------------------- 132 (202)
T ss_dssp CCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSC---------------------------------------
T ss_pred ccccceeeecccccchHHHHHHHhccccccceeeecCCCCc---------------------------------------
Confidence 459999999999999999999999999999998874210
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEe
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELL 239 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~ 239 (264)
+..........|+++++|++|.++|++..+++.+.+.+. .+++.+
T Consensus 133 --------------------------------~~~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 180 (202)
T d2h1ia1 133 --------------------------------RGMQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWE 180 (202)
T ss_dssp --------------------------------SSCCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred --------------------------------ccccccccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEE
Confidence 000111234678999999999999999999888887643 688889
Q ss_pred cCCCCcccccChhcHHHHHHHHhcC
Q 024681 240 KIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 240 ~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
| +||.+. .+..+.+.+||++
T Consensus 181 ~-ggH~~~----~~~~~~~~~wl~k 200 (202)
T d2h1ia1 181 N-RGHQLT----MGEVEKAKEWYDK 200 (202)
T ss_dssp S-STTSCC----HHHHHHHHHHHHH
T ss_pred C-CCCcCC----HHHHHHHHHHHHH
Confidence 8 589653 3345667777753
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.87 E-value=4e-21 Score=134.09 Aligned_cols=181 Identities=17% Similarity=0.152 Sum_probs=127.2
Q ss_pred eEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCC--CCCCCc---ccchHHHHHHHHHHHH
Q 024681 8 LHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNP--DYFDFR---RYTTLDAYVDDLLNIL 80 (264)
Q Consensus 8 ~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~--~~~~~~---~~~~~~~~~~~~~~~~ 80 (264)
++....++ +.|+||++||.+++...|..+.+.| .++.++.++.+..+.+.. ...... ...++....+.+..++
T Consensus 7 ~~~~~~~~~~~P~vi~lHG~G~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (203)
T d2r8ba1 7 FHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFI 86 (203)
T ss_dssp CEEEECCCTTSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHH
T ss_pred EeecCCCCCCCCEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHH
Confidence 33333444 5799999999999999999999999 999999998775544421 100001 1112333344444444
Q ss_pred H----HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 81 D----TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 81 ~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
+ ..+.++++++|+|+||.+++.++..+|+.+.+++++++.......
T Consensus 87 ~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~------------------------------ 136 (203)
T d2r8ba1 87 KANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK------------------------------ 136 (203)
T ss_dssp HHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC------------------------------
T ss_pred HHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc------------------------------
Confidence 3 356789999999999999999999999999999999975321000
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR--- 233 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--- 233 (264)
........|+++++|++|.++|.+.++++.+.+...
T Consensus 137 -----------------------------------------~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~ 175 (203)
T d2r8ba1 137 -----------------------------------------ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGT 175 (203)
T ss_dssp -----------------------------------------CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSE
T ss_pred -----------------------------------------cccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCC
Confidence 001123568999999999999999999888877532
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++++ +||.+. ++ ..+.+.+||.+
T Consensus 176 v~~~~~~-ggH~~~---~~-~~~~~~~wl~~ 201 (203)
T d2r8ba1 176 VETVWHP-GGHEIR---SG-EIDAVRGFLAA 201 (203)
T ss_dssp EEEEEES-SCSSCC---HH-HHHHHHHHHGG
T ss_pred EEEEEEC-CCCcCC---HH-HHHHHHHHHHh
Confidence 6888898 589864 33 34667788763
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.87 E-value=3.6e-20 Score=130.17 Aligned_cols=171 Identities=18% Similarity=0.209 Sum_probs=123.6
Q ss_pred CCCCceEEEecC---CCCCh--hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---
Q 024681 14 GTGDRILVLAHG---FGTDQ--SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL--- 83 (264)
Q Consensus 14 g~~~p~vv~~hG---~~~~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 83 (264)
++..|++|++|| ++++. .....+++.| .||.|+.+|+||.|.|..... . .....+|..++++.+
T Consensus 21 ~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~-~-----~~~e~~d~~aa~~~~~~~ 94 (218)
T d2i3da1 21 EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD-H-----GAGELSDAASALDWVQSL 94 (218)
T ss_dssp STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC-S-----SHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccc-c-----chhHHHHHHHHHhhhhcc
Confidence 335579999998 34443 3345677777 999999999999999976421 1 222334444444433
Q ss_pred --CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC
Q 024681 84 --GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 84 --~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
...+++++|+|+||.+++.++.+.+ .+.+++++.+......
T Consensus 95 ~~~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~------------------------------------ 137 (218)
T d2i3da1 95 HPDSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYD------------------------------------ 137 (218)
T ss_dssp CTTCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSC------------------------------------
T ss_pred cccccceeEEeeehHHHHHHHHHHhhc-cccceeeccccccccc------------------------------------
Confidence 2358999999999999999998876 4677777776422100
Q ss_pred CCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC----ceEE
Q 024681 162 GADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR----NTVE 237 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~ 237 (264)
...+.....|+++++|+.|.+++.+....+.+.+... .+++
T Consensus 138 -----------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~ 182 (218)
T d2i3da1 138 -----------------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHR 182 (218)
T ss_dssp -----------------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEE
T ss_pred -----------------------------------hhhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEE
Confidence 0113334779999999999999999988887776532 5889
Q ss_pred EecCCCCcccccChhcHHHHHHHHhc
Q 024681 238 LLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 238 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++|++|++. .+.+++.+.+.+||+
T Consensus 183 vi~gAdHfF~-g~~~~l~~~v~~~l~ 207 (218)
T d2i3da1 183 TLPGANHFFN-GKVDELMGECEDYLD 207 (218)
T ss_dssp EETTCCTTCT-TCHHHHHHHHHHHHH
T ss_pred EeCCCCCCCc-CCHHHHHHHHHHHHH
Confidence 9999999876 567889999999986
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.87 E-value=4.2e-21 Score=134.36 Aligned_cols=171 Identities=15% Similarity=0.163 Sum_probs=113.6
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCC---CCCCCCCCccc--chHHHHHHHH----HHHHHHhC-
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGS---VNPDYFDFRRY--TTLDAYVDDL----LNILDTLG- 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~---s~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~- 84 (264)
+.|+||++||++++...|..+.+.| .++.+++++.+.... ..........+ ......++++ ..+.+..+
T Consensus 22 ~~p~vv~lHG~g~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i 101 (209)
T d3b5ea1 22 SRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGL 101 (209)
T ss_dssp CCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHHHHhCc
Confidence 4689999999999999999999999 999999987642110 00000001111 1122223333 33444444
Q ss_pred -CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 85 -VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 85 -~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
.++++++|||+||.+++.++.++|+++++++++++......
T Consensus 102 d~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~-------------------------------------- 143 (209)
T d3b5ea1 102 NLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH-------------------------------------- 143 (209)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS--------------------------------------
T ss_pred ccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccc--------------------------------------
Confidence 35899999999999999999999999999999987422100
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---CceEEEec
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTVELLK 240 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~ 240 (264)
.......++|+++++|++|.+++ +..+++.+.+.. .+++.+++
T Consensus 144 ---------------------------------~~~~~~~~~p~~~~~G~~D~~~~-~~~~~~~~~l~~~G~~v~~~~~~ 189 (209)
T d3b5ea1 144 ---------------------------------VPATDLAGIRTLIIAGAADETYG-PFVPALVTLLSRHGAEVDARIIP 189 (209)
T ss_dssp ---------------------------------CCCCCCTTCEEEEEEETTCTTTG-GGHHHHHHHHHHTTCEEEEEEES
T ss_pred ---------------------------------ccccccccchheeeeccCCCccC-HHHHHHHHHHHHCCCCeEEEEEC
Confidence 00112236799999999999997 344455554432 27888998
Q ss_pred CCCCcccccChhcHHHHHHHHhc
Q 024681 241 IEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+ ||.+. +++ .+.+.+||.
T Consensus 190 g-gH~i~---~~~-~~~~~~wl~ 207 (209)
T d3b5ea1 190 S-GHDIG---DPD-AAIVRQWLA 207 (209)
T ss_dssp C-CSCCC---HHH-HHHHHHHHH
T ss_pred C-CCCCC---HHH-HHHHHHHhC
Confidence 5 89774 333 456788885
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.86 E-value=3.2e-20 Score=132.01 Aligned_cols=189 Identities=13% Similarity=0.111 Sum_probs=126.2
Q ss_pred CCcceeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCc-----------ccch
Q 024681 2 GDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFR-----------RYTT 68 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~-----------~~~~ 68 (264)
|..+..+.+...+...|.||++|+..+.....+.+++.| .||.|+++|+.+.+.......... ...+
T Consensus 13 g~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (233)
T d1dina_ 13 GHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFD 92 (233)
T ss_dssp SCEECEEEECCSSSSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHHHHHHHHTCC
T ss_pred CCEEEEEEECCCCCCceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHHHHHHHHhhhhh
Confidence 445555555555555689999997766666677888888 999999999977655432111100 0112
Q ss_pred HHHHHHHHHHHHHHhC-----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHH
Q 024681 69 LDAYVDDLLNILDTLG-----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFR 143 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (264)
.+....|+...++.+. .+++.++|+|+||.+++.++.+.+ +.+.+.+.+....
T Consensus 93 ~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~~--~~~~~~~~~~~~~-------------------- 150 (233)
T d1dina_ 93 MEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY--VDRAVGYYGVGLE-------------------- 150 (233)
T ss_dssp HHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSCGG--------------------
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeecccccc--cceeccccccccc--------------------
Confidence 4455667777666652 148999999999999999887643 5555554432100
Q ss_pred HHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH
Q 024681 144 AMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA 223 (264)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 223 (264)
...+...++++|+++++|++|..+|.+..
T Consensus 151 ---------------------------------------------------~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~ 179 (233)
T d1dina_ 151 ---------------------------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSR 179 (233)
T ss_dssp ---------------------------------------------------GGGGGGGGCCSCEEEEEETTCTTSCHHHH
T ss_pred ---------------------------------------------------cchhhhhccCCcceeeecccccCCCHHHH
Confidence 00112345788999999999999999988
Q ss_pred HHHHHHcCCC--ceEEEecCCCCcccccChh--------cHHHHHHHHhc
Q 024681 224 EYLQRHLGGR--NTVELLKIEGHLPHLSAPA--------IVGPVIRRALS 263 (264)
Q Consensus 224 ~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~--------~~~~~i~~fl~ 263 (264)
+.+.+.+... .+++++||++|.+..+..+ +..+.+.+||.
T Consensus 180 ~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa 229 (233)
T d1dina_ 180 QLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLA 229 (233)
T ss_dssp HHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHH
Confidence 8887765432 6899999999976543332 23466667775
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.85 E-value=7.3e-21 Score=137.72 Aligned_cols=201 Identities=14% Similarity=0.068 Sum_probs=117.0
Q ss_pred ceEEEecCCCCC-----hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCC--CCcccchHHHHHHHHHHHHHHh----C
Q 024681 18 RILVLAHGFGTD-----QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYF--DFRRYTTLDAYVDDLLNILDTL----G 84 (264)
Q Consensus 18 p~vv~~hG~~~~-----~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~ 84 (264)
|+||++||.++. ...+......+ +||.|+.+|+||.+.+..... ....+. ....+++.++++.+ .
T Consensus 33 P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 110 (258)
T d2bgra2 33 PLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLG--TFEVEDQIEAARQFSKMGF 110 (258)
T ss_dssp EEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTT--SHHHHHHHHHHHHHTTSSS
T ss_pred eEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHHHhhhhhhh--hHHHHHHHHHHHHhhhhcc
Confidence 799999994222 11222233344 899999999999876532100 001111 11233334444444 2
Q ss_pred --CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
.+++.++|+|+||.+++.++..+|+.+...+...+....... ...... ..... . ..
T Consensus 111 id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~------------~~~~~-~--~~ 168 (258)
T d2bgra2 111 VDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYY-------DSVYTE------------RYMGL-P--TP 168 (258)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGS-------BHHHHH------------HHHCC-C--ST
T ss_pred cccccccccCcchhhcccccccccCCCcceEEEEeecccccccc-------cccccc------------hhccc-c--cc
Confidence 247999999999999999999999988777776654221100 000000 00000 0 00
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCc-ccCEEEEecCCCCCcchhhHHHHHHHcCC---CceEEE
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLV-RVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTVEL 238 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~ 238 (264)
.. .... .. ..+....+.++ ++|+++++|++|..+|...++++.+.+.. .+++++
T Consensus 169 ~~---~~~~-~~------------------~~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~ 226 (258)
T d2bgra2 169 ED---NLDH-YR------------------NSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMW 226 (258)
T ss_dssp TT---THHH-HH------------------HSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEE
T ss_pred hh---hHHH-hh------------------cccccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEE
Confidence 00 0000 00 00111112233 37999999999999999888888776532 278999
Q ss_pred ecCCCCccc-ccChhcHHHHHHHHhcC
Q 024681 239 LKIEGHLPH-LSAPAIVGPVIRRALSR 264 (264)
Q Consensus 239 ~~~~gH~~~-~~~~~~~~~~i~~fl~~ 264 (264)
+|+++|.+. .+...++.+.+.+||++
T Consensus 227 ~~g~~H~~~~~~~~~~~~~~i~~fl~~ 253 (258)
T d2bgra2 227 YTDEDHGIASSTAHQHIYTHMSHFIKQ 253 (258)
T ss_dssp ETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 999999653 34567788899999864
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=3.8e-19 Score=128.96 Aligned_cols=221 Identities=13% Similarity=0.091 Sum_probs=121.1
Q ss_pred eeEEEEeC-CCCceEEEecCCC-----CChhhHHH----hhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHH
Q 024681 7 ALHVRVVG-TGDRILVLAHGFG-----TDQSAWQR----ILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 7 ~~~~~~~g-~~~p~vv~~hG~~-----~~~~~~~~----~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
.+.+++.+ +++|+||++||.+ .+...|.. +...+ .||.|+++|+|..+....+ . .+++..+
T Consensus 20 ~~~~~~~~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~~------~-~~~d~~~ 92 (263)
T d1vkha_ 20 TLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNP------R-NLYDAVS 92 (263)
T ss_dssp CEEEECCCTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTT------H-HHHHHHH
T ss_pred eEEeccCCCCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhhh------H-HHHhhhh
Confidence 45565554 4678999999953 23334433 44555 7999999999976554321 1 3677777
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC-----CCCCCCCCCCCCccHHHHHHHHHHHHhhh
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS-----PRFLNDEDYHGGFEEAEIDKVFRAMEANY 149 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (264)
.+..+.+..+.++++|+|||+||.+++.++...++....+...... ................. ..... ...
T Consensus 93 ~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~ 168 (263)
T d1vkha_ 93 NITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKE---LLIEY-PEY 168 (263)
T ss_dssp HHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHH---HHHHC-GGG
T ss_pred hhhcccccccccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchh---hhhhc-ccc
Confidence 7777888888899999999999999999988765432211110000 00000000000000000 00000 000
Q ss_pred hhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHH
Q 024681 150 EAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRH 229 (264)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 229 (264)
.. +.................. ........+.++.+|+++++|++|.++|.+.+..+.+.
T Consensus 169 ~~--------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~ 227 (263)
T d1vkha_ 169 DC--------------------FTRLAFPDGIQMYEEEPSR-VMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISC 227 (263)
T ss_dssp HH--------------------HHHHHCTTCGGGCCCCHHH-HHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHH
T ss_pred ch--------------------hhhcccccccccccccccc-cCccccccccccCCCeeeeecCCCcccCHHHHHHHHHH
Confidence 00 0000000000000000000 00000112334578999999999999999999888887
Q ss_pred cCCC---ceEEEecCCCCcccccChhcHHHHHHH
Q 024681 230 LGGR---NTVELLKIEGHLPHLSAPAIVGPVIRR 260 (264)
Q Consensus 230 ~~~~---~~~~~~~~~gH~~~~~~~~~~~~~i~~ 260 (264)
++.. ++++++++++|...+++ +++.+.|.+
T Consensus 228 L~~~g~~~~~~~~~~~~H~~~~~~-~~~~~~i~~ 260 (263)
T d1vkha_ 228 LQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFD 260 (263)
T ss_dssp HHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHH
T ss_pred HHHCCCCEEEEEECCCCchhhhcC-hHHHHHHHH
Confidence 6432 78999999999766655 445555543
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.82 E-value=2.3e-20 Score=138.59 Aligned_cols=101 Identities=18% Similarity=0.270 Sum_probs=87.9
Q ss_pred CCCceEEEecCCCCChh------hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC
Q 024681 15 TGDRILVLAHGFGTDQS------AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~------~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (264)
+.+.||||+||++++.. .|..+.+.| +||+|+++|+||+|.|+... . +.+++++++.++++.++.+
T Consensus 6 ~~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~-----~-~~~~l~~~i~~~~~~~~~~ 79 (319)
T d1cvla_ 6 ATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN-----G-RGEQLLAYVKQVLAATGAT 79 (319)
T ss_dssp CCSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTT-----S-HHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCc-----c-cHHHHHHHHHHHHHHhCCC
Confidence 34557999999988765 377888889 89999999999999886531 1 4788999999999999999
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
++++|||||||.++..++.++|++|+++|+++++.
T Consensus 80 ~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 80 KVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CEEEEeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 99999999999999999999999999999999853
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=1.4e-20 Score=136.21 Aligned_cols=199 Identities=13% Similarity=0.048 Sum_probs=111.7
Q ss_pred ceEEEecCCCCC---hhhHH--Hhhhhc--CCceEEEecCCCCCCCCCCC--CCCcccchHHHHHHHHHHHHHHh----C
Q 024681 18 RILVLAHGFGTD---QSAWQ--RILPYL--NHHRVIMFDLVCAGSVNPDY--FDFRRYTTLDAYVDDLLNILDTL----G 84 (264)
Q Consensus 18 p~vv~~hG~~~~---~~~~~--~~~~~l--~g~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~ 84 (264)
|+||++||.+++ ...|. .....| +||.|+++|+||.+.+.... .....+. ....+|+.+.++.+ .
T Consensus 32 Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~~g--~~~~~d~~~~i~~l~~~~~ 109 (258)
T d1xfda2 32 PLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLG--LLEEKDQMEAVRTMLKEQY 109 (258)
T ss_dssp EEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTT--THHHHHHHHHHHHHHSSSS
T ss_pred eEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhccch--hHHHHHHHHhhhhhccccc
Confidence 799999996332 12232 223345 89999999999865432100 0011111 12233444444443 3
Q ss_pred --CCeEEEEecChhHHHHHHHHHhCCC----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIRRPD----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP 158 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
.+++.++|+|+||.+++.++...++ .++..+.+++....... ....... +.. .
T Consensus 110 id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-----------~~~--~- 168 (258)
T d1xfda2 110 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLY-------ASAFSER-----------YLG--L- 168 (258)
T ss_dssp EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSS-------BHHHHHH-----------HHC--C-
T ss_pred ccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecc-------ccccccc-----------ccc--c-
Confidence 3579999999999999988776654 34555555543221100 0000000 000 0
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCC-cccCEEEEecCCCCCcchhhHHHHHHHcCC---Cc
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGL-VRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RN 234 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~ 234 (264)
....... ....+....+.+ .+.|+|+++|+.|..+|++.+.++.+.+.. ..
T Consensus 169 ------------------~~~~~~~-------~~~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~ 223 (258)
T d1xfda2 169 ------------------HGLDNRA-------YEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANY 223 (258)
T ss_dssp ------------------CSSCCSS-------TTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCC
T ss_pred ------------------cccchHH-------hhccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCE
Confidence 0000000 000011111222 267999999999999999888887766532 27
Q ss_pred eEEEecCCCCcccc-cChhcHHHHHHHHhcC
Q 024681 235 TVELLKIEGHLPHL-SAPAIVGPVIRRALSR 264 (264)
Q Consensus 235 ~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 264 (264)
+++++|+++|.+.. +....+.+.+.+||++
T Consensus 224 ~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~ 254 (258)
T d1xfda2 224 SLQIYPDESHYFTSSSLKQHLYRSIINFFVE 254 (258)
T ss_dssp EEEEETTCCSSCCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 89999999997543 3456677889999875
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.81 E-value=4.5e-19 Score=127.56 Aligned_cols=177 Identities=12% Similarity=0.064 Sum_probs=115.0
Q ss_pred EEeCCCCceEEEecCCC---CChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh--
Q 024681 11 RVVGTGDRILVLAHGFG---TDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-- 83 (264)
Q Consensus 11 ~~~g~~~p~vv~~hG~~---~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 83 (264)
...+...|+||++||.+ ++...|..++..| +||.|+.+|+|..+.. ++.+..+|+.+.++++
T Consensus 56 ~P~~~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~-----------~~p~~~~d~~~a~~~~~~ 124 (261)
T d2pbla1 56 LPEGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEV-----------RISEITQQISQAVTAAAK 124 (261)
T ss_dssp CCSSSCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTS-----------CHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccccccc-----------cCchhHHHHHHHHHHHHh
Confidence 34455678999999943 5566777888888 9999999999965433 2444555555544444
Q ss_pred -CCCeEEEEecChhHHHHHHHHHhCC------CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 84 -GVNRCAYVGHSVSAMIGLLASIRRP------DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 84 -~~~~~~l~G~S~Gg~~a~~~a~~~p------~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
..++++++|||.||.++..++.... ..+++++.+++......... . ....+
T Consensus 125 ~~~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------------~~~~~---- 182 (261)
T d2pbla1 125 EIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR---T---------------SMNEK---- 182 (261)
T ss_dssp HSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG---S---------------TTHHH----
T ss_pred cccCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhh---h---------------hhccc----
Confidence 2479999999999999987765432 24788888877533211000 0 00000
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 236 (264)
...++..... .+......+...|+++++|++|..++.+.++.+.+.++ ++.
T Consensus 183 --------------------~~~~~~~~~~-------~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l~--~~~ 233 (261)
T d2pbla1 183 --------------------FKMDADAAIA-------ESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD--ADH 233 (261)
T ss_dssp --------------------HCCCHHHHHH-------TCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT--CEE
T ss_pred --------------------ccCCHHHHHH-------hCchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHhC--CCc
Confidence 0000000000 01112234567899999999999888889999999986 578
Q ss_pred EEecCCCCccccc
Q 024681 237 ELLKIEGHLPHLS 249 (264)
Q Consensus 237 ~~~~~~gH~~~~~ 249 (264)
+++++.+|+-.++
T Consensus 234 ~~~~~~~HF~vi~ 246 (261)
T d2pbla1 234 VIAFEKHHFNVIE 246 (261)
T ss_dssp EEETTCCTTTTTG
T ss_pred eEeCCCCchhHHH
Confidence 8999999975443
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.81 E-value=7.5e-20 Score=133.67 Aligned_cols=98 Identities=11% Similarity=0.079 Sum_probs=81.8
Q ss_pred CceEEEecCCCCChhh--HHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEe
Q 024681 17 DRILVLAHGFGTDQSA--WQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVG 92 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~--~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 92 (264)
+++|||+||++.+... |..+.+.| .||.|+.+|+||+|.++.. . +.+++++.+..+++..+.+++.|||
T Consensus 31 ~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~------~-sae~la~~i~~v~~~~g~~kV~lVG 103 (317)
T d1tcaa_ 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ------V-NTEYMVNAITALYAGSGNNKLPVLT 103 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHH------H-HHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCchH------h-HHHHHHHHHHHHHHhccCCceEEEE
Confidence 3589999999988654 56788888 8999999999999987421 1 4667777777888888889999999
Q ss_pred cChhHHHHHHHHHhCCC---ccceeEEecCCC
Q 024681 93 HSVSAMIGLLASIRRPD---LFTKLILIGASP 121 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~ 121 (264)
|||||.++..++.++|+ +|+.+|.+++..
T Consensus 104 hS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~ 135 (317)
T d1tcaa_ 104 WSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp ETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred eCchHHHHHHHHHHCCCcchheeEEEEeCCCC
Confidence 99999999999999884 699999999853
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.81 E-value=9.1e-19 Score=123.21 Aligned_cols=183 Identities=15% Similarity=0.142 Sum_probs=113.7
Q ss_pred eEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-C---CceEEEecCCC--------CCC-C-----CCCCCCCcccchH
Q 024681 8 LHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-N---HHRVIMFDLVC--------AGS-V-----NPDYFDFRRYTTL 69 (264)
Q Consensus 8 ~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~---g~~v~~~d~~g--------~G~-s-----~~~~~~~~~~~~~ 69 (264)
+.+...++.+++||++||+|++...|..+.+.| . ++.+++++-|. ... + ............+
T Consensus 5 ~~i~p~~~~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 84 (218)
T d1auoa_ 5 LILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEEL 84 (218)
T ss_dssp EEECCSSCCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHH
T ss_pred EeeCCCCCCCeEEEEEcCCCCChhhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHH
Confidence 334455666679999999999999998888777 3 45666665431 100 0 0000001111123
Q ss_pred HHHHHHHHHHHHH---hC--CCeEEEEecChhHHHHHHHHHh-CCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHH
Q 024681 70 DAYVDDLLNILDT---LG--VNRCAYVGHSVSAMIGLLASIR-RPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFR 143 (264)
Q Consensus 70 ~~~~~~~~~~~~~---~~--~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (264)
+...+.+.++++. .+ .++++++|+|+||.+++.++.. .+..+.+++.+++.........
T Consensus 85 ~~~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~--------------- 149 (218)
T d1auoa_ 85 EVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDEL--------------- 149 (218)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTC---------------
T ss_pred HHHHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccccc---------------
Confidence 3333334444433 23 4689999999999999988764 5667888998886321100000
Q ss_pred HHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH
Q 024681 144 AMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA 223 (264)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 223 (264)
. ......++|++++||++|.++|.+..
T Consensus 150 --------------------~---------------------------------~~~~~~~~pvl~~hG~~D~vvp~~~~ 176 (218)
T d1auoa_ 150 --------------------E---------------------------------LSASQQRIPALCLHGQYDDVVQNAMG 176 (218)
T ss_dssp --------------------C---------------------------------CCHHHHTCCEEEEEETTCSSSCHHHH
T ss_pred --------------------c---------------------------------cchhccCCCEEEEecCCCCccCHHHH
Confidence 0 00001156999999999999999998
Q ss_pred HHHHHHcCCC---ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 224 EYLQRHLGGR---NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 224 ~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++.+.+... +++..++ +||....+ ..+.+.+||.
T Consensus 177 ~~~~~~L~~~g~~~~~~~~~-~gH~i~~~----~~~~i~~wl~ 214 (218)
T d1auoa_ 177 RSAFEHLKSRGVTVTWQEYP-MGHEVLPQ----EIHDIGAWLA 214 (218)
T ss_dssp HHHHHHHHTTTCCEEEEEES-CSSSCCHH----HHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEEC-CCCccCHH----HHHHHHHHHH
Confidence 8888876542 6888887 89966432 3455666664
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.78 E-value=1.9e-19 Score=130.94 Aligned_cols=98 Identities=20% Similarity=0.256 Sum_probs=85.3
Q ss_pred CCCceEEEecCCCCChh-----hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCe
Q 024681 15 TGDRILVLAHGFGTDQS-----AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNR 87 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~-----~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (264)
+.+-||||+||+++... .|..+.+.| .||+|+++|++|+|.+.. +.+++.+++.++++..+.++
T Consensus 5 ~~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~~---------~a~~l~~~i~~~~~~~g~~~ 75 (285)
T d1ex9a_ 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEV---------RGEQLLQQVEEIVALSGQPK 75 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHH---------HHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcHH---------HHHHHHHHHHHHHHHcCCCe
Confidence 34457999999887654 377888999 899999999999986532 47888999999999999999
Q ss_pred EEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+++|||||||.++..++.++|++|+++|.++++.
T Consensus 76 v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 76 VNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp EEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEEEEECccHHHHHHHHHHCCccceeEEEECCCC
Confidence 9999999999999999999999999999999864
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.75 E-value=2.4e-16 Score=118.55 Aligned_cols=120 Identities=13% Similarity=0.030 Sum_probs=84.0
Q ss_pred CCCcceeeEEEEeCCCC-ceEEEecCCCCCh-hh---HHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHH
Q 024681 1 MGDLLEALHVRVVGTGD-RILVLAHGFGTDQ-SA---WQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYV 73 (264)
Q Consensus 1 ~g~~~~~~~~~~~g~~~-p~vv~~hG~~~~~-~~---~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 73 (264)
+|..+..--|+..++++ |+||+.||++... .. +....+.| +||.|+++|.||+|.|.... ..+...+...
T Consensus 14 DGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~---~~~~~~~~d~ 90 (347)
T d1ju3a2 14 DGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEF---VPHVDDEADA 90 (347)
T ss_dssp TSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCC---CTTTTHHHHH
T ss_pred CCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCcc---ccccchhhhH
Confidence 35555555566666544 7899999976532 22 22334455 99999999999999997642 2222234444
Q ss_pred HHHHHHHHHhCC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 74 DDLLNILDTLGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 74 ~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
.|+.+.+..... .+|.++|+|+||.+++.+|...|..+++++...+....
T Consensus 91 ~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 91 EDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 142 (347)
T ss_dssp HHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred HHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchh
Confidence 555555554432 48999999999999999999999999999998886543
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.69 E-value=1.4e-14 Score=110.71 Aligned_cols=207 Identities=13% Similarity=0.050 Sum_probs=116.6
Q ss_pred CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC--------------------CeEEEEecChhHHHH
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--------------------NRCAYVGHSVSAMIG 100 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~G~S~Gg~~a 100 (264)
+||.|+.+|.||.|.|.... ..+. . +..+|..++++.+.. .+|.++|+|+||.++
T Consensus 135 ~GYavv~~D~RG~g~S~G~~---~~~~-~-~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q 209 (405)
T d1lnsa3 135 RGFASIYVAGVGTRSSDGFQ---TSGD-Y-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMA 209 (405)
T ss_dssp TTCEEEEECCTTSTTSCSCC---CTTS-H-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCcc---ccCC-h-hhhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHH
Confidence 89999999999999997642 2222 3 357788888888742 279999999999999
Q ss_pred HHHHHhCCCccceeEEecCCCCCCC---------CCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 101 LLASIRRPDLFTKLILIGASPRFLN---------DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 101 ~~~a~~~p~~v~~~vl~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
+.+|...|..++++|...+...... ............................... .........
T Consensus 210 ~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 283 (405)
T d1lnsa3 210 YGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGN------AEYEKRLAE 283 (405)
T ss_dssp HHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHH------HHHHHHHHH
T ss_pred HHHHhcCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccccchhhhch------hhhhhccch
Confidence 9999999999999999888654210 0000000000000000000000000000000 000000000
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC--ceEEEecCCCCccccc
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR--NTVELLKIEGHLPHLS 249 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~ 249 (264)
.........+. ....+...+....+.+|++|+|+++|..|..+++..+.++.+.++.. .++++-| .+|.....
T Consensus 284 ~~~~~~~~~~~----~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~~~~~Lilgp-w~H~~~~~ 358 (405)
T d1lnsa3 284 MTAALDRKSGD----YNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHR-GAHIYMNS 358 (405)
T ss_dssp HHHHHCTTTCC----CCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEES-CSSCCCTT
T ss_pred hhhhhhhcccc----chhhhhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEeC-CCCCCCcc
Confidence 00000000000 00111233455667889999999999999999888888888877542 4666556 89965433
Q ss_pred C-hhcHHHHHHHHhc
Q 024681 250 A-PAIVGPVIRRALS 263 (264)
Q Consensus 250 ~-~~~~~~~i~~fl~ 263 (264)
. ..++.+.+.+|++
T Consensus 359 ~~~~d~~~~~~~wFD 373 (405)
T d1lnsa3 359 WQSIDFSETINAYFV 373 (405)
T ss_dssp BSSCCHHHHHHHHHH
T ss_pred cccchHHHHHHHHHH
Confidence 2 2445555555553
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.65 E-value=1.5e-14 Score=107.32 Aligned_cols=96 Identities=17% Similarity=0.080 Sum_probs=61.7
Q ss_pred eEEEEeCC-C-CceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHH
Q 024681 8 LHVRVVGT-G-DRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 8 ~~~~~~g~-~-~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~ 79 (264)
.-|+..+. + .|+||++||.+ ++...+..++..+ .||.|+.+|+|...+...+ ....+..+....+...
T Consensus 67 ~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~~~----~~~~d~~~~~~~~~~~ 142 (317)
T d1lzla_ 67 RFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFP----GPVNDCYAALLYIHAH 142 (317)
T ss_dssp EEEEESSCCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTT----HHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCCCCcEEEEecCcccccccccccchHHHhHHhhcCCcccccccccccccccc----ccccccccchhHHHHH
Confidence 34555543 2 36899999954 4566666777666 4999999999987654321 1111222222333333
Q ss_pred HHHhCC--CeEEEEecChhHHHHHHHHHhC
Q 024681 80 LDTLGV--NRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 80 ~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
.+..++ ++|+++|+|.||.+++.++.+.
T Consensus 143 ~~~~g~D~~rI~l~G~SaGg~la~~~~~~~ 172 (317)
T d1lzla_ 143 AEELGIDPSRIAVGGQSAGGGLAAGTVLKA 172 (317)
T ss_dssp HHHHTEEEEEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHEEEEEeccccHHHHHHHhhh
Confidence 344444 5899999999999998887653
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.64 E-value=1.5e-14 Score=108.90 Aligned_cols=114 Identities=18% Similarity=0.153 Sum_probs=71.6
Q ss_pred ceeeEEEEeCC-C-CceEEEecCCCC---C--hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 5 LEALHVRVVGT-G-DRILVLAHGFGT---D--QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 5 ~~~~~~~~~g~-~-~p~vv~~hG~~~---~--~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
+....|+..+. + .|+||++||.|. + ...+..++..| .|+.|+++|+|..+...+...-+. .+++..+.
T Consensus 92 i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~~p~---~l~D~~~a 168 (358)
T d1jkma_ 92 ITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPS---GVEDCLAA 168 (358)
T ss_dssp EEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTH---HHHHHHHH
T ss_pred EEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccccccCCCch---hhHHHHHH
Confidence 33444555553 2 378999999643 2 23456677777 999999999998744432110011 23344433
Q ss_pred HHHHH---HHhCCCeEEEEecChhHHHHHHHHHh-----CCCccceeEEecCCC
Q 024681 76 LLNIL---DTLGVNRCAYVGHSVSAMIGLLASIR-----RPDLFTKLILIGASP 121 (264)
Q Consensus 76 ~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~v~~~vl~~~~~ 121 (264)
+..+. ...+.+++.++|+|.||.+++.++.. ....+.++++..+..
T Consensus 169 ~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~ 222 (358)
T d1jkma_ 169 VLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYI 222 (358)
T ss_dssp HHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCC
T ss_pred HHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCcccccccccccee
Confidence 33333 23467799999999999999776643 234567788877643
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.62 E-value=1.5e-14 Score=109.60 Aligned_cols=122 Identities=12% Similarity=0.051 Sum_probs=80.0
Q ss_pred CCcceeeEEEEeCCCC-ceEEEecCCCCChh-----------hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCc---
Q 024681 2 GDLLEALHVRVVGTGD-RILVLAHGFGTDQS-----------AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFR--- 64 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~-p~vv~~hG~~~~~~-----------~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~--- 64 (264)
|..+...-|+..+.++ |+||+.|+++.+.. .+....+.| +||.|+.+|.||+|.|........
T Consensus 34 G~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~~~~ 113 (381)
T d1mpxa2 34 GVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLR 113 (381)
T ss_dssp SCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCS
T ss_pred CCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCCceeccchhh
Confidence 5455555566666654 78888898754221 122344556 999999999999999965321100
Q ss_pred -cc-chHHHHHHHHHHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 65 -RY-TTLDAYVDDLLNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 65 -~~-~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
.+ ....+.++|..++++.+ ...+|.++|+|+||.+++.+|...|+.++++|...+....
T Consensus 114 ~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d~ 180 (381)
T d1mpxa2 114 GPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDG 180 (381)
T ss_dssp BTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCT
T ss_pred hhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeecccccc
Confidence 00 00111234444444333 2248999999999999999999999999999999886543
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.61 E-value=2.3e-14 Score=105.86 Aligned_cols=103 Identities=17% Similarity=0.121 Sum_probs=65.6
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC--Ce
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--NR 87 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 87 (264)
+.|+||++||.+ ++...+..++..+ .|+.|+.+|+|...+..-+ ....+..+..+.+.+-.+.+++ ++
T Consensus 78 ~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~~p----~~~~d~~~a~~~~~~~~~~~~~d~~r 153 (311)
T d1jjia_ 78 DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFP----AAVYDCYDATKWVAENAEELRIDPSK 153 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTT----HHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccccccc----hhhhhhhhhhhHHHHhHHHhCcChhH
Confidence 348999999964 4556667777766 5999999999965433211 1111222222233333334443 58
Q ss_pred EEEEecChhHHHHHHHHHh----CCCccceeEEecCCCC
Q 024681 88 CAYVGHSVSAMIGLLASIR----RPDLFTKLILIGASPR 122 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~ 122 (264)
+.++|+|.||.+++.++.. ....+.+.+++.+...
T Consensus 154 i~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~ 192 (311)
T d1jjia_ 154 IFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVN 192 (311)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCC
T ss_pred EEEEeeecCCcceeechhhhhhccccccceeeeecceee
Confidence 9999999999988776543 2235677788887543
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.53 E-value=1.8e-13 Score=100.90 Aligned_cols=98 Identities=22% Similarity=0.159 Sum_probs=61.8
Q ss_pred CceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---C--C
Q 024681 17 DRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---G--V 85 (264)
Q Consensus 17 ~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~ 85 (264)
.|+||++||.+ ++...+..+...+ .++.|+.+|+|.......+ ...++..+.+..+.+.. + .
T Consensus 72 ~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~p-------~~~~D~~~~~~~l~~~~~~~~~d~ 144 (308)
T d1u4na_ 72 YPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFP-------AAVEDAYDALQWIAERAADFHLDP 144 (308)
T ss_dssp EEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT-------HHHHHHHHHHHHHHTTTGGGTEEE
T ss_pred CCEEEEEecCeeeeeccccccchhhhhhhcccccccccccccccccccc-------cccchhhhhhhHHHHhHHhcCCCc
Confidence 37999999965 4556667777776 4567889999865443221 02333333333333322 2 2
Q ss_pred CeEEEEecChhHHHHHHHHHhCC----CccceeEEecCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRP----DLFTKLILIGASP 121 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~ 121 (264)
++++++|+|.||.+++.++.... ..+.+..++.+..
T Consensus 145 ~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
T d1u4na_ 145 ARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPST 184 (308)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCC
T ss_pred ceEEEeeccccchhHHHHHHhhhhccCCCccccccccccc
Confidence 47999999999999988776543 2356666666543
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.52 E-value=2.3e-13 Score=98.90 Aligned_cols=229 Identities=12% Similarity=0.031 Sum_probs=113.8
Q ss_pred CCCcceeeEEEEeC----CCCceEEEecCCCCChhh---HHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHH
Q 024681 1 MGDLLEALHVRVVG----TGDRILVLAHGFGTDQSA---WQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDA 71 (264)
Q Consensus 1 ~g~~~~~~~~~~~g----~~~p~vv~~hG~~~~~~~---~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 71 (264)
+|..+...-|+..+ ..-|+||++||.+..... .......+ .++.+...+.++...................
T Consensus 16 DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (280)
T d1qfma2 16 DGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQN 95 (280)
T ss_dssp TSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHH
T ss_pred CCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhhhccccccccc
Confidence 35445444455544 134899999996543322 12222233 5666666666655432110000000001222
Q ss_pred HHHHHHHHH----HHh--CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHH
Q 024681 72 YVDDLLNIL----DTL--GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAM 145 (264)
Q Consensus 72 ~~~~~~~~~----~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (264)
..++..... ... ......++|+|.||..+...+...++.+++++...+.................
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 166 (280)
T d1qfma2 96 CFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWT--------- 166 (280)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGH---------
T ss_pred ccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhccccccccce---------
Confidence 222222222 222 22478899999999999999999998888887777653321110000000000
Q ss_pred HhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHH
Q 024681 146 EANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEY 225 (264)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 225 (264)
. .......... ....... ......+..........|+|++||+.|..+|...+.+
T Consensus 167 --------~----~~~~~~~~~~-~~~~~~~------------~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~ 221 (280)
T d1qfma2 167 --------T----DYGCSDSKQH-FEWLIKY------------SPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLK 221 (280)
T ss_dssp --------H----HHCCTTSHHH-HHHHHHH------------CGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHH
T ss_pred --------e----cccCCCcccc-ccccccc------------ccccccchhhhcccCCCceEEeecccCCCCCHHHHHH
Confidence 0 0000000000 0000000 0000111112222234489999999999999999999
Q ss_pred HHHHcC----------CCceEEEecCCCCcccccChh--cHHHHHHHHhc
Q 024681 226 LQRHLG----------GRNTVELLKIEGHLPHLSAPA--IVGPVIRRALS 263 (264)
Q Consensus 226 ~~~~~~----------~~~~~~~~~~~gH~~~~~~~~--~~~~~i~~fl~ 263 (264)
+.+++. ..+++++++++||.+.....+ +....+.+||+
T Consensus 222 l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~ 271 (280)
T d1qfma2 222 FIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIA 271 (280)
T ss_dssp HHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 888872 226899999999965432211 22234456654
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.52 E-value=2.7e-13 Score=97.22 Aligned_cols=100 Identities=18% Similarity=0.266 Sum_probs=61.5
Q ss_pred ceEEEecCCCCChhhHHH-------hhhhc------CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-
Q 024681 18 RILVLAHGFGTDQSAWQR-------ILPYL------NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL- 83 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~-------~~~~l------~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (264)
|+|+++||.+++...|.. ....+ ..+.+...+ .+...... ............+++...++..
T Consensus 53 Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~li~~i~~~~ 128 (255)
T d1jjfa_ 53 SVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPN---TNAAGPGI-ADGYENFTKDLLNSLIPYIESNY 128 (255)
T ss_dssp CEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEEC---CCCCCTTC-SCHHHHHHHHHHHTHHHHHHHHS
T ss_pred cEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecc---cccccccc-cccccchHHHHHHHHHHHHHHhh
Confidence 799999998877665421 11111 223333332 22222111 1111112445555555555543
Q ss_pred ----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 84 ----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 84 ----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+.+++.++|+|+||..++.+|.++|+++++++.+++..
T Consensus 129 ~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~ 170 (255)
T d1jjfa_ 129 SVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 170 (255)
T ss_dssp CBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred ccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCc
Confidence 23579999999999999999999999999999998753
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.42 E-value=1.2e-11 Score=93.81 Aligned_cols=119 Identities=13% Similarity=0.046 Sum_probs=77.7
Q ss_pred CCcceeeEEEEeCCCC-ceEEEecCCCCC------------hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCC---
Q 024681 2 GDLLEALHVRVVGTGD-RILVLAHGFGTD------------QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDF--- 63 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~-p~vv~~hG~~~~------------~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~--- 63 (264)
|..+..--|+..+.++ |+||+.|+++.. ..........| +||.|+.+|.||+|.|.......
T Consensus 38 G~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~~~ 117 (385)
T d2b9va2 38 GVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPP 117 (385)
T ss_dssp SCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCCC
T ss_pred CCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCCceeecccc
Confidence 5555555566666544 677777766421 11223344556 99999999999999997532110
Q ss_pred ----cccchHHHHHHHHHHHHHHh----C--CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 64 ----RRYTTLDAYVDDLLNILDTL----G--VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 64 ----~~~~~~~~~~~~~~~~~~~~----~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
..+. ...++|..++++.+ . ..+|.++|+|+||.+++.+|...|+.+++++...+...
T Consensus 118 ~~~~~~~~--~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 118 HGPLNPTK--TDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp SBTTBCSS--CCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred ccccccch--hhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 0111 11234544444443 1 24899999999999999999999989999998887544
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.42 E-value=4.4e-13 Score=95.39 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=72.7
Q ss_pred eEEEecCCCCCh---hhHHHhhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh--CCCeEE
Q 024681 19 ILVLAHGFGTDQ---SAWQRILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL--GVNRCA 89 (264)
Q Consensus 19 ~vv~~hG~~~~~---~~~~~~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 89 (264)
|||++||++++. ..|..+.+.| .|+.|+++++.....+... ...+..+.+.++.+.+.++.. +.+++.
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~---~~~~~~~~~~~e~v~~~I~~~~~~~~~v~ 83 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVE---NSFFLNVNSQVTTVCQILAKDPKLQQGYN 83 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHH---HHHHSCHHHHHHHHHHHHHSCGGGTTCEE
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccc---cchhhhHHHHHHHHHHHHHhcccccccee
Confidence 899999998653 4566666666 5999999997544322110 001113667777777776643 346899
Q ss_pred EEecChhHHHHHHHHHhCCC-ccceeEEecCCCC
Q 024681 90 YVGHSVSAMIGLLASIRRPD-LFTKLILIGASPR 122 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~ 122 (264)
+|||||||.++-.++.++++ .|..+|.++++-.
T Consensus 84 lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~ 117 (279)
T d1ei9a_ 84 AMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp EEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred EEEEccccHHHHHHHHHcCCCCcceEEEECCCCC
Confidence 99999999999999999885 5999999998643
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.40 E-value=3.4e-11 Score=86.58 Aligned_cols=111 Identities=16% Similarity=0.100 Sum_probs=74.6
Q ss_pred eEEEEeCCCCceEEEecCCCC--ChhhHHHh---hhhc--CCceEEEecCCCCC-CCCCCCCCCcccchH-HHHHHHHHH
Q 024681 8 LHVRVVGTGDRILVLAHGFGT--DQSAWQRI---LPYL--NHHRVIMFDLVCAG-SVNPDYFDFRRYTTL-DAYVDDLLN 78 (264)
Q Consensus 8 ~~~~~~g~~~p~vv~~hG~~~--~~~~~~~~---~~~l--~g~~v~~~d~~g~G-~s~~~~~~~~~~~~~-~~~~~~~~~ 78 (264)
+.+.....+.|+|+++||.++ +...|... .+.+ .++.|+.+|--..+ .++.. ....+. + .-+.++|..
T Consensus 18 ~~~~v~~~~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~--~~~~~~-~~tfl~~eL~~ 94 (267)
T d1r88a_ 18 IPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWE--QDGSKQ-WDTFLSAELPD 94 (267)
T ss_dssp EEEEEECCSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCS--SCTTCB-HHHHHHTHHHH
T ss_pred eeEEEECCCCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCcccc--cccccc-HHHHHHHHHHH
Confidence 344444556689999999765 33456543 3334 78999999842211 11111 111222 3 345567777
Q ss_pred HHHHh---CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 79 ILDTL---GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 79 ~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.++.. +.+++.+.|+||||..|+.+|.++|+++++++.+++..
T Consensus 95 ~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~ 140 (267)
T d1r88a_ 95 WLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFL 140 (267)
T ss_dssp HHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCC
T ss_pred HHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCcc
Confidence 77643 34689999999999999999999999999999999853
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.35 E-value=7.6e-11 Score=85.77 Aligned_cols=109 Identities=19% Similarity=0.166 Sum_probs=73.4
Q ss_pred eCCCCceEEEecCCCCCh--hhHHH---hhhhc--CCceEEEecCCCCCCCCCCCCC------CcccchHHHHHHHHHHH
Q 024681 13 VGTGDRILVLAHGFGTDQ--SAWQR---ILPYL--NHHRVIMFDLVCAGSVNPDYFD------FRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 13 ~g~~~p~vv~~hG~~~~~--~~~~~---~~~~l--~g~~v~~~d~~g~G~s~~~~~~------~~~~~~~~~~~~~~~~~ 79 (264)
.+...|+|+++||.++.. ..|.. +.+.+ .++.++.++..+.+........ ...+.....+++++...
T Consensus 30 p~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 109 (288)
T d1sfra_ 30 GGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGW 109 (288)
T ss_dssp CSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHH
T ss_pred CCCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCcccccccccchhHHHHHHHHhHHH
Confidence 334558999999987643 34432 34445 7889999998766544221100 01122233455666655
Q ss_pred HHHh---CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 80 LDTL---GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 80 ~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
++.. +.+++.++|+|+||..|+.++.++|+++++++.+++..
T Consensus 110 i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~ 154 (288)
T d1sfra_ 110 LQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLL 154 (288)
T ss_dssp HHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred HHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCcc
Confidence 5442 34579999999999999999999999999999999754
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.31 E-value=1.5e-11 Score=87.41 Aligned_cols=118 Identities=15% Similarity=0.153 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHh---C--CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTL---G--VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRA 144 (264)
Q Consensus 70 ~~~~~~~~~~~~~~---~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (264)
+.+.+++..+++.. . .+++.++|+|+||..|+.++.++|+++++++.+++..........
T Consensus 102 ~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~~~--------------- 166 (246)
T d3c8da2 102 LAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQ--------------- 166 (246)
T ss_dssp HHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTSS---------------
T ss_pred HHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCCcc---------------
Confidence 34455666666654 2 257999999999999999999999999999999986432111000
Q ss_pred HHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHH
Q 024681 145 MEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAE 224 (264)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 224 (264)
. ....... .......+...|+++.+|+.|..+ ...++
T Consensus 167 -------------------~-~~~~~~~----------------------~~~~~~~~~~~~~~l~~G~~D~~~-~~~~~ 203 (246)
T d3c8da2 167 -------------------Q-EGVLLEK----------------------LKAGEVSAEGLRIVLEAGIREPMI-MRANQ 203 (246)
T ss_dssp -------------------S-CCHHHHH----------------------HHTTSSCCCSCEEEEEEESSCHHH-HHHHH
T ss_pred -------------------c-hHHHHHH----------------------hhhhhhhccCCCeEEEecCCCcch-hHHHH
Confidence 0 0000000 001122344678999999999866 46677
Q ss_pred HHHHHcCCC---ceEEEecCCCCcc
Q 024681 225 YLQRHLGGR---NTVELLKIEGHLP 246 (264)
Q Consensus 225 ~~~~~~~~~---~~~~~~~~~gH~~ 246 (264)
++++.+... +++.+++| ||..
T Consensus 204 ~l~~~L~~~g~~~~~~~~~G-gH~~ 227 (246)
T d3c8da2 204 ALYAQLHPIKESIFWRQVDG-GHDA 227 (246)
T ss_dssp HHHHHTGGGTTSEEEEEESC-CSCH
T ss_pred HHHHHHHHCCCCEEEEEeCC-CCCh
Confidence 888777543 77888885 8943
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.30 E-value=3.9e-12 Score=92.65 Aligned_cols=104 Identities=13% Similarity=0.144 Sum_probs=69.8
Q ss_pred CCCceEEEecCCCCChh--hHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH----hC-
Q 024681 15 TGDRILVLAHGFGTDQS--AWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT----LG- 84 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~--~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~- 84 (264)
..+|++|++|||.++.. .+..+...+ .+++|+++|+.... + . .+. ....+.....+.+..+++. .+
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a-~-~-~Y~-~a~~n~~~Vg~~ia~~i~~l~~~~g~ 143 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGS-Q-T-SYT-QAANNVRVVGAQVAQMLSMLSANYSY 143 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHH-S-S-CHH-HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeecccc-C-c-chH-HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45689999999986653 344555544 67999999996432 1 1 000 1111344455555555553 33
Q ss_pred -CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 85 -VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 85 -~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
.++++|||||+||.+|-.++.+. .++.+++.++|+...
T Consensus 144 ~~~~vhlIGhSLGAhvAG~aG~~~-~~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 144 SPSQVQLIGHSLGAHVAGEAGSRT-PGLGRITGLDPVEAS 182 (337)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTS-TTCCEEEEESCCCTT
T ss_pred ChhheEEEeecHHHhhhHHHHHhh-ccccceeccCCCccc
Confidence 46999999999999997666544 579999999997544
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.25 E-value=9.8e-12 Score=90.34 Aligned_cols=105 Identities=12% Similarity=0.130 Sum_probs=73.9
Q ss_pred CCCceEEEecCCCCChh--hHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----C-
Q 024681 15 TGDRILVLAHGFGTDQS--AWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----G- 84 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~--~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 84 (264)
..+|+++++||+.++.. .+..+...+ .+++|+++|+...... .+. ....+.....+.+..+++.+ +
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~---~Y~-~a~~n~~~Vg~~ia~~i~~l~~~~g~ 143 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRT---EYT-QASYNTRVVGAEIAFLVQVLSTEMGY 143 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSS---CHH-HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhccc---chH-HHHHhHHHHHHHHHHHHHHHHHhcCC
Confidence 35689999999876553 344555544 7899999999643211 011 11113555555666665543 3
Q ss_pred -CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 85 -VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 85 -~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
.++++|||||+||.+|-.++.+.+.++.+++.++|+.+.
T Consensus 144 ~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 144 SPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred CcceeEEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 479999999999999999999988899999999997543
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.21 E-value=2.2e-10 Score=82.87 Aligned_cols=113 Identities=18% Similarity=0.106 Sum_probs=75.4
Q ss_pred EEEEeCCCCceEEEecCCCC--ChhhHHH---hhhhc--CCceEEEecCCCCCCCC-C---C--CCCCcccchHHHHHHH
Q 024681 9 HVRVVGTGDRILVLAHGFGT--DQSAWQR---ILPYL--NHHRVIMFDLVCAGSVN-P---D--YFDFRRYTTLDAYVDD 75 (264)
Q Consensus 9 ~~~~~g~~~p~vv~~hG~~~--~~~~~~~---~~~~l--~g~~v~~~d~~g~G~s~-~---~--~~~~~~~~~~~~~~~~ 75 (264)
.....+.+.|+|+|+||.++ +...|.. +.+.+ .++.|+.+|-...+... . . ......+.-..-++++
T Consensus 21 ~~~~~~~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 100 (280)
T d1dqza_ 21 KVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTRE 100 (280)
T ss_dssp EEEEECCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTH
T ss_pred eEEeeCCCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHH
Confidence 33344556689999999765 3455654 33445 89999999953222111 0 0 0001122212335677
Q ss_pred HHHHHHHh---CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 76 LLNILDTL---GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 76 ~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+...++.. +.+++.+.|+||||..|+.+|.++|+++++++.+++..
T Consensus 101 l~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~ 149 (280)
T d1dqza_ 101 MPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFL 149 (280)
T ss_dssp HHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred HHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCcc
Confidence 77777653 44678999999999999999999999999999999864
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.16 E-value=2.7e-10 Score=82.60 Aligned_cols=104 Identities=12% Similarity=0.065 Sum_probs=66.4
Q ss_pred ceEEEecCCCCChhhHHHhh---hhc--CCceEEEecCCCC----------------CCCCCCCCC----CcccchHHHH
Q 024681 18 RILVLAHGFGTDQSAWQRIL---PYL--NHHRVIMFDLVCA----------------GSVNPDYFD----FRRYTTLDAY 72 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~---~~l--~g~~v~~~d~~g~----------------G~s~~~~~~----~~~~~~~~~~ 72 (264)
|+|+++||.+++...|.... +.. .+..|+.++.... +.+-..... ...+.-.+-+
T Consensus 50 PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i 129 (299)
T d1pv1a_ 50 PTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYI 129 (299)
T ss_dssp CEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHH
T ss_pred CEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchHHHH
Confidence 79999999999998886533 222 5777888764321 111110000 0011112335
Q ss_pred HHHHHHHHHHh-CC---------CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 73 VDDLLNILDTL-GV---------NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 73 ~~~~~~~~~~~-~~---------~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
.+++...++.. .. ++..|.|+||||.-|+.+|.+ +|++..+++.+++..
T Consensus 130 ~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~ 190 (299)
T d1pv1a_ 130 HKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIV 190 (299)
T ss_dssp HTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCC
T ss_pred HHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcC
Confidence 56676666553 21 468999999999999999986 478888888888753
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.11 E-value=4.1e-09 Score=75.75 Aligned_cols=96 Identities=8% Similarity=0.172 Sum_probs=63.0
Q ss_pred ceEEEecCCCCChhhHH-------H----hhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH--
Q 024681 18 RILVLAHGFGTDQSAWQ-------R----ILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT-- 82 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~-------~----~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-- 82 (264)
|+|+++||.+++...|. . +.... ..+.|+.++..+.+..... + ......++...++.
T Consensus 56 Pvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~ 127 (273)
T d1wb4a1 56 NIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQN------F--YQEFRQNVIPFVESKY 127 (273)
T ss_dssp EEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCTTT------H--HHHHHHTHHHHHHHHS
T ss_pred eEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCcccc------c--hhcccccccchhhhhh
Confidence 89999999887654321 1 12222 5788888887654333221 1 22223222222211
Q ss_pred -------------hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 83 -------------LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 83 -------------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.+.+++.+.|+|+||..++.+|.++|+++++++.+++..
T Consensus 128 ~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~ 179 (273)
T d1wb4a1 128 STYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 179 (273)
T ss_dssp CCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred hhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccc
Confidence 133579999999999999999999999999999999853
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.08 E-value=1e-09 Score=79.85 Aligned_cols=47 Identities=17% Similarity=0.025 Sum_probs=38.6
Q ss_pred cccCEEEEecCCCCCcchhhHHHHHHHcCCC-----ceEEEecCCCCccccc
Q 024681 203 VRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-----NTVELLKIEGHLPHLS 249 (264)
Q Consensus 203 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~~ 249 (264)
...|+++++|++|..+|+..++.+.+.+... ++++..+++||.+..+
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~ 140 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEES
T ss_pred CCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCC
Confidence 3579999999999999999999998887542 5677889999976543
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=2.5e-09 Score=76.63 Aligned_cols=58 Identities=14% Similarity=-0.013 Sum_probs=36.3
Q ss_pred ccCEEEEecCC--------CCCcchhhHHHHHHHcCC---CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 204 RVPCVIIQTSK--------DVSVPVSVAEYLQRHLGG---RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 204 ~~P~l~i~g~~--------D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
..|+++.+|+. |..++....+.+.+.+.. .+++.++||++|.... +..+.+.|++...
T Consensus 196 ~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~~--~~s~~~~l~~l~g 264 (265)
T d2gzsa1 196 TKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMF--NASFRQALLDISG 264 (265)
T ss_dssp TCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHH--HHHHHHHHHHHTT
T ss_pred CCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcchHH--HHHHHHHHHHHhC
Confidence 45666666655 566677777777766632 2789999999995432 4556666665543
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=3.4e-08 Score=76.18 Aligned_cols=104 Identities=11% Similarity=-0.036 Sum_probs=71.2
Q ss_pred CCceEEEecCCCCChhhHHHhhhh------------------c-CCceEEEecCC-CCCCCCCCCCCCcccchHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPY------------------L-NHHRVIMFDLV-CAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~------------------l-~g~~v~~~d~~-g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
..|+++++.|.++++..|-.+.+. + +..+++.+|.| |.|.|..... ....+..+.+.|
T Consensus 47 ~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvGtGfS~~~~~--~~~~~~~~~a~d 124 (452)
T d1ivya_ 47 NSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDK--FYATNDTEVAQS 124 (452)
T ss_dssp GSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSC--CCCCBHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCCcccccCCCC--CCCCCcHHHHHH
Confidence 358999999999999888654431 1 34589999986 9999943211 111235566666
Q ss_pred HHHHHHHh-------CCCeEEEEecChhHHHHHHHHHh----CCCccceeEEecCCC
Q 024681 76 LLNILDTL-------GVNRCAYVGHSVSAMIGLLASIR----RPDLFTKLILIGASP 121 (264)
Q Consensus 76 ~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~ 121 (264)
+.+++... ...+++|.|-|+||..+-.+|.. .+-.++++++.++..
T Consensus 125 ~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~ 181 (452)
T d1ivya_ 125 NFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS 181 (452)
T ss_dssp HHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred HHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCcc
Confidence 65544322 34699999999999888777654 223589999998854
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.98 E-value=7e-08 Score=73.60 Aligned_cols=103 Identities=14% Similarity=0.015 Sum_probs=71.2
Q ss_pred CCceEEEecCCCCChhhHHHhhh---h-------c--------CCceEEEecCC-CCCCCCCCCCCCcccchHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP---Y-------L--------NHHRVIMFDLV-CAGSVNPDYFDFRRYTTLDAYVDDL 76 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~---~-------l--------~g~~v~~~d~~-g~G~s~~~~~~~~~~~~~~~~~~~~ 76 (264)
..|.|+++.|.++++..+-.+.+ . + +-.+++.+|.| |.|.|-... ...+ +-.+.++|+
T Consensus 43 ~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGtGfSy~~~--~~~~-~~~~~a~d~ 119 (421)
T d1wpxa1 43 KDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGS--SGVS-NTVAAGKDV 119 (421)
T ss_dssp TSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTSTTCBCSS--CCCC-SHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCCCceecCC--cccc-chHHHHHHH
Confidence 45899999999999888765553 1 1 34689999965 999994321 1222 355666676
Q ss_pred HHHHHHh---------CCCeEEEEecChhHHHHHHHHHhC------CCccceeEEecCCC
Q 024681 77 LNILDTL---------GVNRCAYVGHSVSAMIGLLASIRR------PDLFTKLILIGASP 121 (264)
Q Consensus 77 ~~~~~~~---------~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~ 121 (264)
.++++.. ...+++|.|-|+||..+-.+|.+. +-.++++++.++..
T Consensus 120 ~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~ 179 (421)
T d1wpxa1 120 YNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLT 179 (421)
T ss_dssp HHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCC
T ss_pred HHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCcc
Confidence 6666432 235899999999998887766432 22477999988854
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.89 E-value=1.6e-09 Score=80.57 Aligned_cols=93 Identities=17% Similarity=0.104 Sum_probs=67.7
Q ss_pred ceEEEecCCCCCh-------hhHHH----hhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-
Q 024681 18 RILVLAHGFGTDQ-------SAWQR----ILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL- 83 (264)
Q Consensus 18 p~vv~~hG~~~~~-------~~~~~----~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (264)
-||||+||+.+-. ..|.. +.+.| .|++|++...... .+.++-++++...++..
T Consensus 8 yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~-------------~S~~~RA~eL~~~I~~~~ 74 (388)
T d1ku0a_ 8 APIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL-------------SSNWDRACEAYAQLVGGT 74 (388)
T ss_dssp CCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSS-------------BCHHHHHHHHHHHHHCEE
T ss_pred CCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCc-------------cCHHHHHHHHHHHHhhhh
Confidence 4899999965421 34543 66677 8999999886432 25777777777777642
Q ss_pred ---C-------------------------CCeEEEEecChhHHHHHHHHHhCC-------------------------Cc
Q 024681 84 ---G-------------------------VNRCAYVGHSVSAMIGLLASIRRP-------------------------DL 110 (264)
Q Consensus 84 ---~-------------------------~~~~~l~G~S~Gg~~a~~~a~~~p-------------------------~~ 110 (264)
| .+||+||||||||..+-.++...| +.
T Consensus 75 ~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 154 (388)
T d1ku0a_ 75 VDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRF 154 (388)
T ss_dssp EECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCC
T ss_pred hhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcc
Confidence 1 248999999999999988876543 36
Q ss_pred cceeEEecCCCCC
Q 024681 111 FTKLILIGASPRF 123 (264)
Q Consensus 111 v~~~vl~~~~~~~ 123 (264)
|+++..++++-..
T Consensus 155 V~SvTTIsTPH~G 167 (388)
T d1ku0a_ 155 VLSVTTIATPHDG 167 (388)
T ss_dssp EEEEEEESCCTTC
T ss_pred eEEEEeccCCCCC
Confidence 9999999986543
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.83 E-value=1.4e-07 Score=73.14 Aligned_cols=104 Identities=11% Similarity=0.067 Sum_probs=70.2
Q ss_pred CceEEEecCCCCChhhHHHhhh---h-------c--------CCceEEEecCC-CCCCCCCCCCC-----Cc-ccchHHH
Q 024681 17 DRILVLAHGFGTDQSAWQRILP---Y-------L--------NHHRVIMFDLV-CAGSVNPDYFD-----FR-RYTTLDA 71 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~---~-------l--------~g~~v~~~d~~-g~G~s~~~~~~-----~~-~~~~~~~ 71 (264)
.|++|++.|.++++..+..+.+ . | +-.+++.+|.| |.|.|-..... .. -..+.++
T Consensus 67 ~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~~ 146 (483)
T d1ac5a_ 67 RPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLED 146 (483)
T ss_dssp CCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCHHH
Confidence 4899999999999887754443 1 1 34689999986 89998432111 11 1124667
Q ss_pred HHHHHHHHHHHh-------CCCeEEEEecChhHHHHHHHHHhC------------CCccceeEEecCC
Q 024681 72 YVDDLLNILDTL-------GVNRCAYVGHSVSAMIGLLASIRR------------PDLFTKLILIGAS 120 (264)
Q Consensus 72 ~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~------------p~~v~~~vl~~~~ 120 (264)
.++++..+++.. ...+++|.|-|+||..+-.+|... +-.++++.+.++.
T Consensus 147 ~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~ 214 (483)
T d1ac5a_ 147 VTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGW 214 (483)
T ss_dssp HHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCc
Confidence 777777666542 336899999999998877666542 1247888888774
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.95 E-value=1.1e-05 Score=63.33 Aligned_cols=104 Identities=14% Similarity=0.035 Sum_probs=63.5
Q ss_pred CceEEEecCCCC---ChhhHHHhhhhc---CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHH---HHh
Q 024681 17 DRILVLAHGFGT---DQSAWQRILPYL---NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNIL---DTL 83 (264)
Q Consensus 17 ~p~vv~~hG~~~---~~~~~~~~~~~l---~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 83 (264)
-|++|+|||.+. +......-...+ ++.-|+++++| |+-.+........++. +.|....|+-+- ...
T Consensus 112 lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~G-l~Dq~~AL~WV~~nI~~F 190 (542)
T d2ha2a1 112 TPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVG-LLDQRLALQWVQENIAAF 190 (542)
T ss_dssp EEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHH-HHHHHHHHHHHHHHGGGG
T ss_pred CcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccccCCCcCC-cccHHHHHHHHHHHHHHh
Confidence 389999999542 222221112223 68999999999 4422221111234554 555555554443 344
Q ss_pred CC--CeEEEEecChhHHHHHHHHHhC--CCccceeEEecCCC
Q 024681 84 GV--NRCAYVGHSVSAMIGLLASIRR--PDLFTKLILIGASP 121 (264)
Q Consensus 84 ~~--~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~ 121 (264)
|- ++|.|+|+|.||..+..+.... ...+.++|+.++..
T Consensus 191 GGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 191 GGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred hcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 43 5899999999998887655432 24788999998754
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.92 E-value=1.2e-05 Score=63.06 Aligned_cols=106 Identities=15% Similarity=0.097 Sum_probs=63.9
Q ss_pred CCceEEEecCCCC---Ch--hhHHHhhhhc-CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHHH---H
Q 024681 16 GDRILVLAHGFGT---DQ--SAWQRILPYL-NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNILD---T 82 (264)
Q Consensus 16 ~~p~vv~~hG~~~---~~--~~~~~~~~~l-~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~ 82 (264)
+.|++|+|||.+. +. ..+....-.. ++.-|+++++| |+-.+........++. +.|....+.-+-+ .
T Consensus 105 ~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~G-l~Dq~~AL~WV~~nI~~ 183 (532)
T d1ea5a_ 105 STTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVG-LLDQRMALQWVHDNIQF 183 (532)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHH-HHHHHHHHHHHHHHGGG
T ss_pred CCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCCCCccc-chhHHHHHHHHHHHHHh
Confidence 3489999999542 22 1222211122 78999999998 3432221111234554 6665555544444 4
Q ss_pred hCC--CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCCC
Q 024681 83 LGV--NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASPR 122 (264)
Q Consensus 83 ~~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 122 (264)
.|- ++|.|+|+|.||..+..+... ....+.++|+.++...
T Consensus 184 FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 184 FGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 443 589999999999877655442 1246889999887643
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.91 E-value=1.8e-05 Score=61.18 Aligned_cols=105 Identities=16% Similarity=0.015 Sum_probs=64.8
Q ss_pred CCceEEEecCCCC---ChhhHHHhhhhc---CCceEEEecCC----CCCC-CCCCCCCCcccchHHHHHHHHHHHH---H
Q 024681 16 GDRILVLAHGFGT---DQSAWQRILPYL---NHHRVIMFDLV----CAGS-VNPDYFDFRRYTTLDAYVDDLLNIL---D 81 (264)
Q Consensus 16 ~~p~vv~~hG~~~---~~~~~~~~~~~l---~g~~v~~~d~~----g~G~-s~~~~~~~~~~~~~~~~~~~~~~~~---~ 81 (264)
+-|++|+|||.+. +...+..-...+ .+.-|+++++| |+=. ++.....+.++. +.|....+.-+- .
T Consensus 95 ~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~G-l~Dq~~AL~WV~~nI~ 173 (483)
T d1qe3a_ 95 NLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLG-LLDQAAALKWVRENIS 173 (483)
T ss_dssp SEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHH-HHHHHHHHHHHHHHGG
T ss_pred CCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccc-cHHHHHHHHHHHHHHH
Confidence 3489999999642 222222222233 57999999998 3321 111111234554 666655554444 3
Q ss_pred HhCC--CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 82 TLGV--NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 82 ~~~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
..|. ++|.|+|||.||..+..+... ....+.++|+.+++.
T Consensus 174 ~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 174 AFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 217 (483)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCc
Confidence 4443 589999999999887666543 224789999999864
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.83 E-value=2.5e-05 Score=61.09 Aligned_cols=105 Identities=18% Similarity=0.066 Sum_probs=62.4
Q ss_pred CCceEEEecCCCC---ChhhHHHhhhhc---CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHH---HH
Q 024681 16 GDRILVLAHGFGT---DQSAWQRILPYL---NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNIL---DT 82 (264)
Q Consensus 16 ~~p~vv~~hG~~~---~~~~~~~~~~~l---~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~ 82 (264)
+.|++|+|||.+. +......-...+ .+.-|+++++| |+-.+........++. +.|....|.-+- +.
T Consensus 103 ~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~G-l~Dq~~AL~WV~~nI~~ 181 (526)
T d1p0ia_ 103 NATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMG-LFDQQLALQWVQKNIAA 181 (526)
T ss_dssp SEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHH-HHHHHHHHHHHHHHGGG
T ss_pred CCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCccccccccc-ccchhhhhhhHHHHHHH
Confidence 3489999999552 222221112223 68999999998 3322211111234554 666655554443 34
Q ss_pred hCC--CeEEEEecChhHHHHHHHHH--hCCCccceeEEecCCC
Q 024681 83 LGV--NRCAYVGHSVSAMIGLLASI--RRPDLFTKLILIGASP 121 (264)
Q Consensus 83 ~~~--~~~~l~G~S~Gg~~a~~~a~--~~p~~v~~~vl~~~~~ 121 (264)
.|- ++|.|+|+|.||..+..+.. .....+.++|+.+++.
T Consensus 182 FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 182 FGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred hhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 443 58999999999988755443 2234688888888754
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.82 E-value=2.8e-05 Score=60.91 Aligned_cols=102 Identities=16% Similarity=0.141 Sum_probs=63.4
Q ss_pred ceEEEecCCCC---ChhhHHHhhhhc-CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHHH---HhCC-
Q 024681 18 RILVLAHGFGT---DQSAWQRILPYL-NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNILD---TLGV- 85 (264)
Q Consensus 18 p~vv~~hG~~~---~~~~~~~~~~~l-~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~- 85 (264)
|++|+|||.+. +...+....-.. ++.-|+++++| |+-.+... ....++. +.|....|+-+-+ ..|-
T Consensus 114 PV~v~ihGG~~~~gs~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~-~~~gN~G-l~Dq~~AL~WV~~nI~~FGGD 191 (532)
T d2h7ca1 114 PVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDE-HSRGNWG-HLDQVAALRWVQDNIASFGGN 191 (532)
T ss_dssp EEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSST-TCCCCHH-HHHHHHHHHHHHHHGGGGTEE
T ss_pred EEEEEEeCCcccccccccCCchhhhhcCceEEEEEeeccCCCcccccccc-ccccccc-cHHHHHHHHHHHHHHHHhcCC
Confidence 89999999543 333332221122 89999999998 33222211 1234554 6666555544444 4443
Q ss_pred -CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 86 -NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 86 -~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
++|.|+|+|.||..+..+... ....+.++|+.++..
T Consensus 192 p~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 192 PGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp EEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred cceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 589999999999877665442 334788999998764
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=97.69 E-value=3.8e-05 Score=60.30 Aligned_cols=105 Identities=15% Similarity=0.072 Sum_probs=61.5
Q ss_pred CceEEEecCCCCCh---hhH--HHhh-hhc---CCceEEEecCC----CCCCCCC-CCCCCcccchHHHHHHHHHHHH--
Q 024681 17 DRILVLAHGFGTDQ---SAW--QRIL-PYL---NHHRVIMFDLV----CAGSVNP-DYFDFRRYTTLDAYVDDLLNIL-- 80 (264)
Q Consensus 17 ~p~vv~~hG~~~~~---~~~--~~~~-~~l---~g~~v~~~d~~----g~G~s~~-~~~~~~~~~~~~~~~~~~~~~~-- 80 (264)
-|++|+|||.+... ..+ ..+. ..+ .+.-|+++++| |+-.+.. ....+.++. +.|+...+.-+-
T Consensus 122 lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~G-l~Dq~~AL~WV~~n 200 (544)
T d1thga_ 122 LPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAG-LHDQRKGLEWVSDN 200 (544)
T ss_dssp EEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHH-HHHHHHHHHHHHHH
T ss_pred CCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccccccHH-HHHhhhhhhhhhhh
Confidence 38999999965322 221 1222 222 78999999998 3322210 000123443 555555544443
Q ss_pred -HHhCC--CeEEEEecChhHHHHHHHHHh--------CCCccceeEEecCCCC
Q 024681 81 -DTLGV--NRCAYVGHSVSAMIGLLASIR--------RPDLFTKLILIGASPR 122 (264)
Q Consensus 81 -~~~~~--~~~~l~G~S~Gg~~a~~~a~~--------~p~~v~~~vl~~~~~~ 122 (264)
...|- ++|.|+|+|.||..+..+... ....+.++|+.++.+.
T Consensus 201 I~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~~ 253 (544)
T d1thga_ 201 IANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPL 253 (544)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCC
T ss_pred hcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccccc
Confidence 34443 589999999999766544432 1247899999997643
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.61 E-value=8.2e-05 Score=58.82 Aligned_cols=104 Identities=12% Similarity=0.027 Sum_probs=62.0
Q ss_pred CceEEEecCCCC---Chhh--HH--Hh--hhhc---CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 17 DRILVLAHGFGT---DQSA--WQ--RI--LPYL---NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 17 ~p~vv~~hG~~~---~~~~--~~--~~--~~~l---~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
-|++|+|||.+. +... +. .+ ...| .+.-|+++++| |+-.+.. ...+.++. +.|....+.-+-
T Consensus 98 lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~-~~~~gN~G-l~Dq~~AL~WV~ 175 (579)
T d2bcea_ 98 LPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGD-SNLPGNYG-LWDQHMAIAWVK 175 (579)
T ss_dssp EEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSS-TTCCCCHH-HHHHHHHHHHHH
T ss_pred CcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccc-cCCCccch-hhHHHHHHHHHh
Confidence 389999998542 2211 11 11 1233 56889999998 3322211 11235554 666665555444
Q ss_pred H---HhCC--CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCCC
Q 024681 81 D---TLGV--NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASPR 122 (264)
Q Consensus 81 ~---~~~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 122 (264)
+ ..|- ++|.|+|+|.||..+..+... ....+.++|+.++...
T Consensus 176 ~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 224 (579)
T d2bcea_ 176 RNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVGL 224 (579)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCTT
T ss_pred hhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCcc
Confidence 4 4443 589999999999877654432 3457899999997543
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=97.59 E-value=7e-05 Score=58.62 Aligned_cols=104 Identities=12% Similarity=0.041 Sum_probs=60.0
Q ss_pred CCceEEEecCCCC---ChhhH--HHhhh-h-c--CCceEEEecCC----CCCCCCC-CCCCCcccchHHHHHHHHHH---
Q 024681 16 GDRILVLAHGFGT---DQSAW--QRILP-Y-L--NHHRVIMFDLV----CAGSVNP-DYFDFRRYTTLDAYVDDLLN--- 78 (264)
Q Consensus 16 ~~p~vv~~hG~~~---~~~~~--~~~~~-~-l--~g~~v~~~d~~----g~G~s~~-~~~~~~~~~~~~~~~~~~~~--- 78 (264)
+.|++|+|||.+. +...| ..+.. . + +++-|+++++| |+-.... ....+.++. +.|....+.-
T Consensus 113 ~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~G-l~Dq~~AL~WV~~ 191 (534)
T d1llfa_ 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAG-LKDQRLGMQWVAD 191 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHH-HHHHHHHHHHHHH
T ss_pred CCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccccccc-hhHHHHHHHHHHh
Confidence 3489999999553 33323 22222 2 2 78999999999 3322110 000123343 5555544443
Q ss_pred HHHHhCC--CeEEEEecChhHHHHH-HHHHhC----C---CccceeEEecCC
Q 024681 79 ILDTLGV--NRCAYVGHSVSAMIGL-LASIRR----P---DLFTKLILIGAS 120 (264)
Q Consensus 79 ~~~~~~~--~~~~l~G~S~Gg~~a~-~~a~~~----p---~~v~~~vl~~~~ 120 (264)
-|...|. ++|.|+|+|.||..+. ++.... | ..+.++|+.+++
T Consensus 192 nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 192 NIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred hhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence 3344443 5899999999998554 444321 1 258899999875
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=97.56 E-value=5.3e-05 Score=59.04 Aligned_cols=103 Identities=12% Similarity=0.024 Sum_probs=60.3
Q ss_pred ceEEEecCCCC---ChhhH--HHhhhhc-CCceEEEecCCC----CCCCCC-CCCCCcccchHHHHHHHHHHHH---HHh
Q 024681 18 RILVLAHGFGT---DQSAW--QRILPYL-NHHRVIMFDLVC----AGSVNP-DYFDFRRYTTLDAYVDDLLNIL---DTL 83 (264)
Q Consensus 18 p~vv~~hG~~~---~~~~~--~~~~~~l-~g~~v~~~d~~g----~G~s~~-~~~~~~~~~~~~~~~~~~~~~~---~~~ 83 (264)
|++|+|||.+. +...+ ......- .+.-|+++++|= +=.+.. ......++. +.|....++-+- ...
T Consensus 98 PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~G-l~Dq~~AL~WV~~nI~~F 176 (517)
T d1ukca_ 98 PVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAG-LLDQRKALRWVKQYIEQF 176 (517)
T ss_dssp EEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHH-HHHHHHHHHHHHHHGGGG
T ss_pred eEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCccccccccccchh-HHHHHHHHHHHHHHHHhh
Confidence 89999999542 22223 2333333 678889999983 222210 000123443 555555544443 344
Q ss_pred CC--CeEEEEecChhHHHHHHHH-Hh---CCCccceeEEecCCC
Q 024681 84 GV--NRCAYVGHSVSAMIGLLAS-IR---RPDLFTKLILIGASP 121 (264)
Q Consensus 84 ~~--~~~~l~G~S~Gg~~a~~~a-~~---~p~~v~~~vl~~~~~ 121 (264)
|. ++|.|+|+|.||..+.... .- ....+.++|+.+++.
T Consensus 177 GGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 177 GGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred cCCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 43 5899999999998765433 32 224789999998753
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.41 E-value=0.00028 Score=55.62 Aligned_cols=105 Identities=12% Similarity=-0.035 Sum_probs=61.0
Q ss_pred CCceEEEecCCCC---ChhhHHHhhhhc---CCceEEEecCC----CCCC------CCCCCCCCcccchHHHHHHHHHHH
Q 024681 16 GDRILVLAHGFGT---DQSAWQRILPYL---NHHRVIMFDLV----CAGS------VNPDYFDFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 16 ~~p~vv~~hG~~~---~~~~~~~~~~~l---~g~~v~~~d~~----g~G~------s~~~~~~~~~~~~~~~~~~~~~~~ 79 (264)
+.|++|+|||.+. +......-...| .+.-|+++++| |+=. +........++. +.|....+.-+
T Consensus 138 ~lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~G-l~Dq~~AL~WV 216 (571)
T d1dx4a_ 138 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVG-LWDQALAIRWL 216 (571)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHH-HHHHHHHHHHH
T ss_pred CCeEEEEEeCCCccCCCCcccccchhhhhhcCCeeEEeecceeccccccccccccccccccCCCCccc-chHHHHHHHHH
Confidence 3489999999542 222211112233 46888899998 2211 110111134554 66666555544
Q ss_pred HHH---hC--CCeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 80 LDT---LG--VNRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 80 ~~~---~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
-+. .| .++|.|+|+|.||..+..+... ....+.++|+.++..
T Consensus 217 ~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 217 KDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp HHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccc
Confidence 443 33 3589999999999887655443 234688888887653
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=97.20 E-value=0.005 Score=40.71 Aligned_cols=52 Identities=12% Similarity=0.006 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC----CccceeEEecCC
Q 024681 69 LDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP----DLFTKLILIGAS 120 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~ 120 (264)
.....+.+.+..++--..+++|+|+|.|+.++-.++...+ ++|.++++++-+
T Consensus 79 ~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 79 IREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 4556666666666666679999999999999988887654 578999999854
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=97.03 E-value=0.0006 Score=47.79 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=21.9
Q ss_pred HHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 78 NILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 78 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+.++.....++++.|||+||.+|..+|..
T Consensus 124 ~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 124 DQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 33344455789999999999999887653
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=97.03 E-value=0.00063 Score=47.66 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHH----HhCCCeEEEEecChhHHHHHHHHHh
Q 024681 69 LDAYVDDLLNILD----TLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 69 ~~~~~~~~~~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+....+++...++ .....++++.|||+||.+|..+|..
T Consensus 112 ~~~~~~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 112 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 4444444444443 3344699999999999999877753
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.98 E-value=0.00057 Score=48.06 Aligned_cols=38 Identities=26% Similarity=0.339 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHh----CCCeEEEEecChhHHHHHHHHHh
Q 024681 69 LDAYVDDLLNILDTL----GVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+..+..++...++.+ ...++++.|||+||.+|..+|..
T Consensus 116 ~~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 116 WKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 344444444444433 44589999999999999887765
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.96 E-value=0.00078 Score=47.04 Aligned_cols=23 Identities=22% Similarity=0.258 Sum_probs=19.2
Q ss_pred CCCeEEEEecChhHHHHHHHHHh
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
...++++.|||+||.+|..+|..
T Consensus 123 ~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 123 PDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHH
T ss_pred CCcceEEeccchhHHHHHHHHHH
Confidence 44589999999999999877654
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.93 E-value=0.00085 Score=47.09 Aligned_cols=38 Identities=18% Similarity=0.291 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHH----HhCCCeEEEEecChhHHHHHHHHHh
Q 024681 69 LDAYVDDLLNILD----TLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 69 ~~~~~~~~~~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+....+++...++ .....++++.|||+||.+|..++..
T Consensus 117 ~~~~~~~v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 117 WRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHH
Confidence 3334444444443 3344599999999999999888864
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=96.12 E-value=0.024 Score=37.76 Aligned_cols=78 Identities=14% Similarity=0.012 Sum_probs=46.1
Q ss_pred CCceEEEecCCCCCCCCCCCCCCcccc-hHHH----HHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhC--------
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRYT-TLDA----YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRR-------- 107 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-------- 107 (264)
.+-.+..+++|..-..... ....|. |..+ ..+.+....++-...+++|+|+|.|+.++-.++...
T Consensus 34 ~~~~~~~v~YPA~~~~~~~--~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~ 111 (207)
T d1qoza_ 34 PGTTSEAIVYPACGGQASC--GGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGIT 111 (207)
T ss_dssp TTEEEEECCSCCCSSCGGG--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBC
T ss_pred CCCeEEEeeeccccccccc--ccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccc
Confidence 5667788888865332111 011221 2222 333333444444457999999999999998776421
Q ss_pred ----------CCccceeEEecCC
Q 024681 108 ----------PDLFTKLILIGAS 120 (264)
Q Consensus 108 ----------p~~v~~~vl~~~~ 120 (264)
.++|.++++++-+
T Consensus 112 ~~~~~l~~~~~~~V~avvl~GdP 134 (207)
T d1qoza_ 112 NTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp CCSCCSCHHHHHHEEEEEEESCT
T ss_pred cCCCCCChhhhhcEEEEEEEeCC
Confidence 1368888888743
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=96.05 E-value=0.027 Score=37.47 Aligned_cols=100 Identities=11% Similarity=0.075 Sum_probs=54.8
Q ss_pred eEEEecCCCCCh------hhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccc-hHHHHHHHHH----HHHHHhCCCe
Q 024681 19 ILVLAHGFGTDQ------SAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYT-TLDAYVDDLL----NILDTLGVNR 87 (264)
Q Consensus 19 ~vv~~hG~~~~~------~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~ 87 (264)
.||+..|.+.+. .....+.+.+.+-.+..+++|........ ....|. +..+=+..+. +..++-...+
T Consensus 6 ~vi~arGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YpA~~~~~~~--~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk 83 (207)
T d1g66a_ 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSC--GGASYSSSVAQGIAAVASAVNSFNSQCPSTK 83 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGG--TSCCHHHHHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred EEEEeCCCCCCCCCCccHHHHHHHHHhcCCCeeEEeccccccccccc--ccccccccHHHHHHHHHHHHHHHHHhCCCCc
Confidence 455566655322 22333444445667888888864322111 112231 2232333333 3333344579
Q ss_pred EEEEecChhHHHHHHHHHhC------------------CCccceeEEecCC
Q 024681 88 CAYVGHSVSAMIGLLASIRR------------------PDLFTKLILIGAS 120 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~------------------p~~v~~~vl~~~~ 120 (264)
++|+|+|.|+.++-.++... .++|.++++++-+
T Consensus 84 ~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~v~avvl~GdP 134 (207)
T d1g66a_ 84 IVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp EEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred EEEEeeccccHHHHHHHhccCCccccccccccCCCchhhhceeeEEEecCC
Confidence 99999999999998776421 1357788888754
|