Citrus Sinensis ID: 024717

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
MTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVLKRWGKQPYQNWHKL
cccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
ccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
MTFFESAALIGGQVLANWLVgidvkkgvvpssTASVFLSILGIICVsrgwtenpkmafddyrTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWaptlvadgrevhlGLIFPsllgarmlgstvfpwlisgpssfrteDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLArlrtmyvpnelrggmislsLAPANAAILLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVLKrwgkqpyqnwhkl
MTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVLKRWgkqpyqnwhkl
MTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVafaalglfiaagCMHVLKRWGKQPYQNWHKL
***FESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVLKRWGKQPYQN****
MTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTEN************FTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVL**************
MTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVLKRWGKQPYQNWHKL
*TFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVLKRWGK*********
oooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
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MTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVLKRWGKQPYQNWHKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query263 2.2.26 [Sep-21-2011]
Q921Y4450 Major facilitator superfa yes no 0.574 0.335 0.284 7e-07
Q6N075450 Major facilitator superfa no no 0.634 0.371 0.287 8e-07
Q5R542450 Major facilitator superfa yes no 0.574 0.335 0.284 2e-06
Q0VC03450 Major facilitator superfa yes no 0.574 0.335 0.284 6e-06
Q6DG19481 Major facilitator superfa yes no 0.501 0.274 0.307 0.0007
>sp|Q921Y4|MFSD5_MOUSE Major facilitator superfamily domain-containing protein 5 OS=Mus musculus GN=Mfsd5 PE=2 SV=1 Back     alignment and function desciption
 Score = 54.7 bits (130), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 14/165 (8%)

Query: 48  RGWTEN--PKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGR 105
           R W EN   + AF          +  D+R+ LL + QA  +  I +F  LW P L  D  
Sbjct: 220 RNWGENYDRQRAFSKTCAGGLRCLLSDRRVLLLGVIQALFESVIFIFVFLWTPVL--DPH 277

Query: 106 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY---- 161
              LG++F S + A +LGS+++   I+    +  +   L +  VL  VFS+    +    
Sbjct: 278 GAPLGIVFSSFMAASLLGSSLY--RIATSKRYHLQPMHLLSLAVLIVVFSLFMLTFSTSP 335

Query: 162 -QE--IGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMIS 203
            QE  +   +A   +  AC GL  PS++ LR   +P   + G+++
Sbjct: 336 GQENPVESFIAFLLIELAC-GLYFPSMSFLRRKVIPETEQAGVLN 379

Mus musculus (taxid: 10090)
>sp|Q6N075|MFSD5_HUMAN Major facilitator superfamily domain-containing protein 5 OS=Homo sapiens GN=MFSD5 PE=2 SV=2 Back     alignment and function description
>sp|Q5R542|MFSD5_PONAB Major facilitator superfamily domain-containing protein 5 OS=Pongo abelii GN=MFSD5 PE=2 SV=1 Back     alignment and function description
>sp|Q0VC03|MFSD5_BOVIN Major facilitator superfamily domain-containing protein 5 OS=Bos taurus GN=MFSD5 PE=2 SV=1 Back     alignment and function description
>sp|Q6DG19|MFSD5_DANRE Major facilitator superfamily domain-containing protein 5 OS=Danio rerio GN=mfsd5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query263
147781852 920 hypothetical protein VITISV_036093 [Viti 1.0 0.285 0.75 1e-113
225438942 448 PREDICTED: major facilitator superfamily 1.0 0.587 0.746 1e-111
224074231 451 predicted protein [Populus trichocarpa] 0.996 0.580 0.726 1e-109
449448260 452 PREDICTED: major facilitator superfamily 0.996 0.579 0.665 1e-100
356540641 450 PREDICTED: major facilitator superfamily 0.992 0.58 0.657 1e-100
356495500 449 PREDICTED: major facilitator superfamily 0.992 0.581 0.653 1e-99
357453663 447 Major facilitator superfamily domain-con 0.992 0.583 0.665 2e-98
297821551 449 hypothetical protein ARALYDRAFT_481182 [ 1.0 0.585 0.651 5e-96
30681953 449 major facilitator protein [Arabidopsis t 1.0 0.585 0.659 5e-93
343172982 385 hypothetical protein, partial [Silene la 0.996 0.680 0.615 7e-88
>gi|147781852|emb|CAN72170.1| hypothetical protein VITISV_036093 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/264 (75%), Positives = 225/264 (85%), Gaps = 1/264 (0%)

Query: 1   MTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA-FD 59
           MTFFESA+ IG Q+LANWL+G DVKK VV  S ASV L+++ II +++ W E P+MA F 
Sbjct: 657 MTFFESASFIGSQLLANWLLGSDVKKSVVAPSIASVILAMITIIYITKCWAETPQMAVFK 716

Query: 60  DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGA 119
           DY+ SF+T+IF DKRIWLL  AQAC+ FSIA+FWILWAPTLVADGREVHLGLIFP LLGA
Sbjct: 717 DYKMSFYTHIFCDKRIWLLACAQACIHFSIAVFWILWAPTLVADGREVHLGLIFPCLLGA 776

Query: 120 RMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVG 179
           RMLGST  PWL S PSS RTED L+YAF+++G V S++AYDYQEIG+LV LFCLFHAC G
Sbjct: 777 RMLGSTALPWLTSVPSSLRTEDYLVYAFIIMGLVLSVVAYDYQEIGVLVTLFCLFHACAG 836

Query: 180 LILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVAFAALGL 239
           LILPSLARLRTMYVPNELRGGMISLSLAP+NAAIL F++  G+YRNI NA + AFAALGL
Sbjct: 837 LILPSLARLRTMYVPNELRGGMISLSLAPSNAAILFFVVQGGYYRNIGNATIFAFAALGL 896

Query: 240 FIAAGCMHVLKRWGKQPYQNWHKL 263
           F AAGCMHVLKRWGKQPYQN HKL
Sbjct: 897 FGAAGCMHVLKRWGKQPYQNGHKL 920

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225438942|ref|XP_002279446.1| PREDICTED: major facilitator superfamily domain-containing protein 5 [Vitis vinifera] gi|296087347|emb|CBI33721.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224074231|ref|XP_002304311.1| predicted protein [Populus trichocarpa] gi|222841743|gb|EEE79290.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449448260|ref|XP_004141884.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Cucumis sativus] gi|449511005|ref|XP_004163836.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356540641|ref|XP_003538795.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Glycine max] Back     alignment and taxonomy information
>gi|356495500|ref|XP_003516615.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Glycine max] Back     alignment and taxonomy information
>gi|357453663|ref|XP_003597112.1| Major facilitator superfamily domain-containing protein [Medicago truncatula] gi|357482681|ref|XP_003611627.1| Major facilitator superfamily domain-containing protein [Medicago truncatula] gi|355486160|gb|AES67363.1| Major facilitator superfamily domain-containing protein [Medicago truncatula] gi|355512962|gb|AES94585.1| Major facilitator superfamily domain-containing protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|297821551|ref|XP_002878658.1| hypothetical protein ARALYDRAFT_481182 [Arabidopsis lyrata subsp. lyrata] gi|297324497|gb|EFH54917.1| hypothetical protein ARALYDRAFT_481182 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30681953|ref|NP_850037.1| major facilitator protein [Arabidopsis thaliana] gi|26451523|dbj|BAC42859.1| unknown protein [Arabidopsis thaliana] gi|29824249|gb|AAP04085.1| unknown protein [Arabidopsis thaliana] gi|330252314|gb|AEC07408.1| major facilitator protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|343172982|gb|AEL99194.1| hypothetical protein, partial [Silene latifolia] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query263
TAIR|locus:1005716655449 AT2G23093 "AT2G23093" [Arabido 1.0 0.585 0.636 2.2e-89
MGI|MGI:2145901450 Mfsd5 "major facilitator super 0.771 0.451 0.274 2.7e-12
UNIPROTKB|Q6N075450 MFSD5 "Major facilitator super 0.760 0.444 0.273 1.3e-11
TAIR|locus:2082971460 AT3G49310 [Arabidopsis thalian 0.669 0.382 0.270 5e-11
WB|WBGene00021870432 Y54G2A.4 [Caenorhabditis elega 0.806 0.490 0.303 1.2e-10
UNIPROTKB|Q0VC03450 MFSD5 "Major facilitator super 0.771 0.451 0.274 1.8e-10
TAIR|locus:2137707460 AT4G27720 [Arabidopsis thalian 0.562 0.321 0.300 6.1e-10
TAIR|locus:2019429462 AT1G64650 [Arabidopsis thalian 0.562 0.320 0.306 8.5e-10
ZFIN|ZDB-GENE-040718-468481 mfsd5 "major facilitator super 0.570 0.311 0.301 5.4e-08
TAIR|locus:1005716655 AT2G23093 "AT2G23093" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
 Identities = 168/264 (63%), Positives = 203/264 (76%)

Query:     1 MTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPK-MAFD 59
             MTF ESA+LIGGQVLANWLVG +V+ G+  S+TAS+ LS++ IIC+ +   E  K + F 
Sbjct:   186 MTFLESASLIGGQVLANWLVGENVQDGIALSATASLLLSVVTIICIVQTAKEPLKTLPFR 245

Query:    60 DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGA 119
             DY T+F+ Y+ GDKRIW L  +QACLQFS A+FWILWAPT+VADGREV+LGLI+P  LG+
Sbjct:   246 DYSTAFYAYVLGDKRIWFLGTSQACLQFSTAVFWILWAPTIVADGREVNLGLIYPCFLGS 305

Query:   120 RMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVG 179
             RMLGSTVFPWL+SG S  R EDCL+Y + +LG VFSI+AYDYQEI ILV LFCLFH   G
Sbjct:   306 RMLGSTVFPWLMSGQSLLRLEDCLVYIYALLGIVFSIVAYDYQEIRILVVLFCLFHGFAG 365

Query:   180 LILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVXXXXXXX 239
             L LP LARLRTMYVPNELRGGMISLS  PANAAIL FL+ RG+   IEN+ M+       
Sbjct:   366 LALPLLARLRTMYVPNELRGGMISLSQVPANAAILFFLIQRGYSNKIENSTMMALGAISL 425

Query:   240 XXXXXCMHVLKRWGKQPYQNWHKL 263
                  C+++L+RWGK P+ +WHKL
Sbjct:   426 FTASGCIYMLRRWGKSPHHDWHKL 449
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
MGI|MGI:2145901 Mfsd5 "major facilitator superfamily domain containing 5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q6N075 MFSD5 "Major facilitator superfamily domain-containing protein 5" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
TAIR|locus:2082971 AT3G49310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00021870 Y54G2A.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VC03 MFSD5 "Major facilitator superfamily domain-containing protein 5" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TAIR|locus:2137707 AT4G27720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019429 AT1G64650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-468 mfsd5 "major facilitator superfamily domain containing 5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query263
pfam05631354 pfam05631, DUF791, Protein of unknown function (DU 5e-07
>gnl|CDD|114359 pfam05631, DUF791, Protein of unknown function (DUF791) Back     alignment and domain information 
 Score = 49.9 bits (119), Expect = 5e-07
 Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 9/154 (5%)

Query: 8   ALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFD--DYRTSF 65
           A+I G + AN L        V P   A+ FL+I   I ++  W+EN     D  D +  F
Sbjct: 176 AIISG-LFANLLADRFGFGPVAPFDAAACFLAIGMAIILNT-WSENYGDPSDKKDLKEQF 233

Query: 66  ---FTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARML 122
                 I  D  ++ L L Q+  + S+  F  LW P L  +  E+  G IF + + A ML
Sbjct: 234 KVAAQAIASDPNVFCLGLVQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASML 293

Query: 123 GSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI 156
           GS+V   L+      R E  +   F++     S+
Sbjct: 294 GSSVAARLLQ--RHLRVESYMQIVFLLSAVCLSL 325

This family consists of several eukaryotic proteins of unknown function. Length = 354

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 263
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 100.0
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 100.0
TIGR00900365 2A0121 H+ Antiporter protein. 99.25
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.19
PRK10489417 enterobactin exporter EntS; Provisional 99.17
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.13
PRK11646400 multidrug resistance protein MdtH; Provisional 99.1
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.1
PRK09874408 drug efflux system protein MdtG; Provisional 99.07
PRK11043401 putative transporter; Provisional 99.05
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.02
TIGR00901356 2A0125 AmpG-related permease. 99.01
TIGR00893399 2A0114 d-galactonate transporter. 99.01
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.01
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 98.99
PRK11195393 lysophospholipid transporter LplT; Provisional 98.97
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 98.95
PRK05122399 major facilitator superfamily transporter; Provisi 98.94
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.94
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 98.93
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 98.93
PRK11652394 emrD multidrug resistance protein D; Provisional 98.88
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.88
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 98.86
PRK09705393 cynX putative cyanate transporter; Provisional 98.84
PRK11902402 ampG muropeptide transporter; Reviewed 98.84
PRK11010491 ampG muropeptide transporter; Validated 98.84
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.84
PRK03699394 putative transporter; Provisional 98.83
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 98.83
TIGR00895398 2A0115 benzoate transport. 98.83
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.81
PRK03545390 putative arabinose transporter; Provisional 98.81
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 98.81
PRK10406432 alpha-ketoglutarate transporter; Provisional 98.77
PRK12382392 putative transporter; Provisional 98.77
PRK10213394 nepI ribonucleoside transporter; Reviewed 98.76
PRK11663434 regulatory protein UhpC; Provisional 98.76
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 98.75
TIGR00897402 2A0118 polyol permease family. This family of prot 98.72
PRK10091382 MFS transport protein AraJ; Provisional 98.71
PRK03633381 putative MFS family transporter protein; Provision 98.7
TIGR00889418 2A0110 nucleoside transporter. This family of prot 98.67
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.67
PRK10054395 putative transporter; Provisional 98.67
PRK15011393 sugar efflux transporter B; Provisional 98.66
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 98.65
PRK10473392 multidrug efflux system protein MdtL; Provisional 98.65
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.64
PRK15075434 citrate-proton symporter; Provisional 98.64
TIGR00891405 2A0112 putative sialic acid transporter. 98.64
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 98.63
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 98.62
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 98.61
PRK09528420 lacY galactoside permease; Reviewed 98.61
TIGR00881379 2A0104 phosphoglycerate transporter family protein 98.56
PRK14995495 methyl viologen resistance protein SmvA; Provision 98.54
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 98.54
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.51
PRK10133438 L-fucose transporter; Provisional 98.47
PRK10642490 proline/glycine betaine transporter; Provisional 98.45
PRK12307426 putative sialic acid transporter; Provisional 98.4
PRK09952438 shikimate transporter; Provisional 98.39
TIGR01272310 gluP glucose/galactose transporter. Disruption of 98.39
TIGR00898505 2A0119 cation transport protein. 98.36
TIGR00892455 2A0113 monocarboxylate transporter 1. 98.36
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 98.36
TIGR00896355 CynX cyanate transporter. This family of proteins 98.35
PRK10054 395 putative transporter; Provisional 98.29
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 98.29
PRK10504471 putative transporter; Provisional 98.27
PRK03893496 putative sialic acid transporter; Provisional 98.24
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.23
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 98.22
PRK03545 390 putative arabinose transporter; Provisional 98.12
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.12
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 98.11
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.11
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.1
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 98.09
PLN00028476 nitrate transmembrane transporter; Provisional 98.07
PRK10489 417 enterobactin exporter EntS; Provisional 98.06
PRK11195 393 lysophospholipid transporter LplT; Provisional 98.03
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 98.03
TIGR00900 365 2A0121 H+ Antiporter protein. 98.01
PRK11646 400 multidrug resistance protein MdtH; Provisional 97.97
TIGR00897 402 2A0118 polyol permease family. This family of prot 97.97
PRK10077479 xylE D-xylose transporter XylE; Provisional 97.96
PRK10504 471 putative transporter; Provisional 97.96
TIGR00895 398 2A0115 benzoate transport. 97.93
PRK11663 434 regulatory protein UhpC; Provisional 97.93
PRK09848448 glucuronide transporter; Provisional 97.93
PF13347428 MFS_2: MFS/sugar transport protein 97.92
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 97.9
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 97.9
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 97.88
TIGR00891 405 2A0112 putative sialic acid transporter. 97.85
PRK10213 394 nepI ribonucleoside transporter; Reviewed 97.85
TIGR00893 399 2A0114 d-galactonate transporter. 97.85
PRK10473 392 multidrug efflux system protein MdtL; Provisional 97.81
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 97.81
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 97.8
COG0738422 FucP Fucose permease [Carbohydrate transport and m 97.75
PRK11652 394 emrD multidrug resistance protein D; Provisional 97.72
PRK03699 394 putative transporter; Provisional 97.71
PRK03633 381 putative MFS family transporter protein; Provision 97.69
PRK05122 399 major facilitator superfamily transporter; Provisi 97.68
PRK10091 382 MFS transport protein AraJ; Provisional 97.68
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 97.68
TIGR00890 377 2A0111 Oxalate/Formate Antiporter. 97.68
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 97.67
PRK09874 408 drug efflux system protein MdtG; Provisional 97.66
PRK12382 392 putative transporter; Provisional 97.64
PRK12307 426 putative sialic acid transporter; Provisional 97.64
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 97.6
cd06174 352 MFS The Major Facilitator Superfamily (MFS) is a l 97.59
PRK09669444 putative symporter YagG; Provisional 97.57
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 97.56
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 97.49
PRK09584 500 tppB putative tripeptide transporter permease; Rev 97.47
PRK09705 393 cynX putative cyanate transporter; Provisional 97.47
TIGR00880141 2_A_01_02 Multidrug resistance protein. 97.46
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 97.42
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 97.38
PRK09556 467 uhpT sugar phosphate antiporter; Reviewed 97.34
PRK09584500 tppB putative tripeptide transporter permease; Rev 97.3
PRK03893 496 putative sialic acid transporter; Provisional 97.3
PRK10429473 melibiose:sodium symporter; Provisional 97.3
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 97.28
PRK15462 493 dipeptide/tripeptide permease D; Provisional 97.27
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 97.27
PRK10207 489 dipeptide/tripeptide permease B; Provisional 97.27
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 97.26
PRK11043 401 putative transporter; Provisional 97.25
PRK10133 438 L-fucose transporter; Provisional 97.21
PRK14995 495 methyl viologen resistance protein SmvA; Provision 97.18
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 97.16
PRK10077 479 xylE D-xylose transporter XylE; Provisional 97.16
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 97.11
KOG2532466 consensus Permease of the major facilitator superf 97.09
TIGR00896 355 CynX cyanate transporter. This family of proteins 97.02
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 96.98
TIGR00898 505 2A0119 cation transport protein. 96.97
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 96.9
TIGR00899 375 2A0120 sugar efflux transporter. This family of pr 96.89
PRK10406 432 alpha-ketoglutarate transporter; Provisional 96.88
KOG2533495 consensus Permease of the major facilitator superf 96.84
PRK10207489 dipeptide/tripeptide permease B; Provisional 96.8
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 96.77
KOG2532 466 consensus Permease of the major facilitator superf 96.77
PRK09528 420 lacY galactoside permease; Reviewed 96.73
PLN00028 476 nitrate transmembrane transporter; Provisional 96.68
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 96.58
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 96.57
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 96.54
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 96.53
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 96.43
PRK15403 413 multidrug efflux system protein MdtM; Provisional 96.36
PRK10642 490 proline/glycine betaine transporter; Provisional 96.32
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 96.32
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 96.2
PRK11462460 putative transporter; Provisional 96.17
PRK15011 393 sugar efflux transporter B; Provisional 96.16
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 96.13
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 96.13
TIGR00805 633 oat sodium-independent organic anion transporter. 96.11
TIGR00892 455 2A0113 monocarboxylate transporter 1. 96.05
PRK15075 434 citrate-proton symporter; Provisional 95.98
COG2211467 MelB Na+/melibiose symporter and related transport 95.71
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 95.54
PTZ00207 591 hypothetical protein; Provisional 95.54
TIGR00902 382 2A0127 phenyl proprionate permease family protein. 95.43
PRK09952 438 shikimate transporter; Provisional 95.35
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 95.3
TIGR00883 394 2A0106 metabolite-proton symporter. This model rep 95.16
TIGR00901 356 2A0125 AmpG-related permease. 95.16
TIGR00805 633 oat sodium-independent organic anion transporter. 94.94
KOG2816463 consensus Predicted transporter ADD1 (major facili 94.85
PRK11010 491 ampG muropeptide transporter; Validated 94.01
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 93.98
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 93.92
KOG1330493 consensus Sugar transporter/spinster transmembrane 93.57
PRK11902 402 ampG muropeptide transporter; Reviewed 93.33
TIGR00889 418 2A0110 nucleoside transporter. This family of prot 92.85
COG2807395 CynX Cyanate permease [Inorganic ion transport and 92.57
KOG1330 493 consensus Sugar transporter/spinster transmembrane 92.45
PRK11128 382 putative 3-phenylpropionic acid transporter; Provi 92.13
PF03825 400 Nuc_H_symport: Nucleoside H+ symporter 90.84
KOG3764464 consensus Vesicular amine transporter [Intracellul 90.81
KOG0254 513 consensus Predicted transporter (major facilitator 90.51
KOG2563480 consensus Permease of the major facilitator superf 89.47
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 89.07
TIGR00792 437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 88.53
PRK03612 521 spermidine synthase; Provisional 88.31
KOG3764 464 consensus Vesicular amine transporter [Intracellul 86.49
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 85.79
KOG2533 495 consensus Permease of the major facilitator superf 85.76
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 85.08
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 84.37
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 80.04
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.3e-66  Score=468.15  Aligned_cols=256  Identities=27%  Similarity=0.382  Sum_probs=218.7

Q ss_pred             hhhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc--chhhH---HHHHHHhcChhHHH
Q 024717            3 FFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF--DDYRT---SFFTYIFGDKRIWL   77 (263)
Q Consensus         3 ~~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~--~~~~~---~~~~~i~~d~~il~   77 (263)
                      |+|+++||+||+.+|.+||+. +.||++||+++++++.+|+.+++..|.|||||++  ++..+   .+.++|.+|+|+.+
T Consensus       174 fgNglvAiiaGlfgn~lvd~~-slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~gaa~aiaSD~ki~L  252 (454)
T KOG4332|consen  174 FGNGLVAIIAGLFGNLLVDTF-SLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGAARAIASDEKIAL  252 (454)
T ss_pred             hhccHHHHHHHHHHHHHHHHh-ccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHhHHHHhcchHHHH
Confidence            689999999999999999997 8999999999999999999999999999999953  44443   45889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh
Q 024717           78 LVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII  157 (263)
Q Consensus        78 lg~~qslfEgsmy~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~  157 (263)
                      +|.+|++||++||+|||+|||+|.+++++.|||.||++||++.|+||++++++.++ ++.+.|+.++++|+++..++..|
T Consensus       253 LG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~-s~~~ve~ymqivf~vs~a~l~Lp  331 (454)
T KOG4332|consen  253 LGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSR-SSPKVESYMQIVFLVSIAALLLP  331 (454)
T ss_pred             HHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhc-CCcccchHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999888999999999999999999999999888875 56788999999999999888888


Q ss_pred             hc-----cchhhH-HHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHHHHhhhhccccchhHH
Q 024717          158 AY-----DYQEIG-ILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAM  231 (263)
Q Consensus       158 ~~-----~~~~~~-~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~l~~g~~~~~~~~~~~  231 (263)
                      ..     |.++.+ -++.+||+||+|||+|||+|+.||+||||||.|+|+||+||+|||++||++|+.- +.......+.
T Consensus       332 ilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynl-h~~~~p~~tr  410 (454)
T KOG4332|consen  332 ILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL-HVDAFPTTTR  410 (454)
T ss_pred             HHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec-ccccCccccc
Confidence            53     334332 3799999999999999999999999999999999999999999999999999840 0000112334


Q ss_pred             HHHHHHHHHHHHHHHH--HHH---HhcCCCCcccc
Q 024717          232 VAFAALGLFIAAGCMH--VLK---RWGKQPYQNWH  261 (263)
Q Consensus       232 ~~~~~~~l~l~~~~~~--~~~---~~~~~~~~~~~  261 (263)
                      .+|++|+.++.++.++  .+-   |++|.-+++|.
T Consensus       411 ~mf~icS~~~~~a~i~~~~L~~v~e~d~~~~~~~~  445 (454)
T KOG4332|consen  411 NMFGICSAFLFVASILQRRLMTVVEHDKERRVPWS  445 (454)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHhhhccHhhcCCCC
Confidence            6888999888887544  332   55555556663

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query263
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.34
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 98.97
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 98.89
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 98.64
2cfq_A417 Lactose permease; transport, transport mechanism, 98.48
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 98.23
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 98.22
2xut_A524 Proton/peptide symporter family protein; transport 98.16
2xut_A 524 Proton/peptide symporter family protein; transport 98.13
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 98.07
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 98.0
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 97.08
4gc0_A 491 D-xylose-proton symporter; MFS, transport protein; 96.33
2cfq_A 417 Lactose permease; transport, transport mechanism, 95.03
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
Probab=99.34  E-value=3.1e-10  Score=103.94  Aligned_cols=200  Identities=10%  Similarity=0.062  Sum_probs=135.6

Q ss_pred             hHHHHHHHHHHHHHHhhhcccCC-ccchHHHHHHHHHHHHHHHhcccccCCCCC---c-ch------------------h
Q 024717            5 ESAALIGGQVLANWLVGIDVKKG-VVPSSTASVFLSILGIICVSRGWTENPKMA---F-DD------------------Y   61 (263)
Q Consensus         5 ns~~AI~aG~~a~~lv~~~~~~g-~~aPF~~a~~~l~i~~ili~~~w~ENyg~~---~-~~------------------~   61 (263)
                      .++-.+++..+++++.+.   .| |+.+|....++.++..++.....+|+..+.   + .+                  .
T Consensus       164 ~~~g~~~g~~~~~~l~~~---~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (451)
T 1pw4_A          164 HNVGGGIPPLLFLLGMAW---FNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTA  240 (451)
T ss_dssp             HHHHHTSHHHHHHHHHHH---TCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-------------CC
T ss_pred             HHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhccCCHhhcCCCChhhhcccccccchhhhhccccc
Confidence            344455667777887775   47 999999988887777666655455543221   0 00                  0


Q ss_pred             hHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccC---CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCC-
Q 024717           62 RTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSF-  137 (263)
Q Consensus        62 ~~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~---~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~-  137 (263)
                      .......+++||+++.+.+...+.....+.+ ..|.|.+.++   -++...|++++.+.++.++|+.+.+++..   |+ 
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~---~~~  316 (451)
T 1pw4_A          241 KQIFMQYVLPNKLLWYIAIANVFVYLLRYGI-LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSD---KVF  316 (451)
T ss_dssp             THHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTS
T ss_pred             ccchHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh
Confidence            0011466789999999888888777766655 4566766553   24445799999999999999999998875   34 


Q ss_pred             -CchhHHHHHHHHHH-HHHHHhhccc-hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717          138 -RTEDCLLYAFVVLG-FVFSIIAYDY-QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA  211 (263)
Q Consensus       138 -~~~~~l~~~~~~~a-~~l~~~~~~~-~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~  211 (263)
                       +.++.+.....+.. .++....... .+.......++++-.+.|..+|....+-.+.+|+|.|+++++++..--|+
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  393 (451)
T 1pw4_A          317 RGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYL  393 (451)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHH
T ss_pred             cCCchhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHH
Confidence             44555544444433 4443333222 12233445566666677888999999999999999999999999988888
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query263
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.03
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 98.79
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 98.09
d1pv7a_ 417 Lactose permease {Escherichia coli [TaxId: 562]} 96.86
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.03  E-value=3.4e-08  Score=87.21  Aligned_cols=199  Identities=11%  Similarity=0.058  Sum_probs=125.3

Q ss_pred             HHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCC--------c----ch----------hhHHHH
Q 024717            9 LIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA--------F----DD----------YRTSFF   66 (263)
Q Consensus         9 AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~--------~----~~----------~~~~~~   66 (263)
                      .+++..++..+.+..  .+|+..|.....+.++..++.....+|.+.+.        +    .+          ..+...
T Consensus       165 ~~i~~~~~~~~~~~~--~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (447)
T d1pw4a_         165 GGIPPLLFLLGMAWF--NDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFM  242 (447)
T ss_dssp             HTSHHHHHHHHHHHT--CCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-------------CCTHHHH
T ss_pred             hhhhhhhhhhHhhhh--hcccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhhhhcccchhhccccccchhhHHH
Confidence            344556667666654  68889999888777777776665444433210        0    00          111235


Q ss_pred             HHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccC---CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHH
Q 024717           67 TYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCL  143 (263)
Q Consensus        67 ~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~---~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l  143 (263)
                      +.+++||.++.+.....+.....+.+. .|.|....+   .+....|++.+.+.+..++|+.+.+++..+..  +.....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~  319 (447)
T d1pw4a_         243 QYVLPNKLLWYIAIANVFVYLLRYGIL-DWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVF--RGNRGA  319 (447)
T ss_dssp             HHTSSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--TTCHHH
T ss_pred             HHHHcCchHHHHHHHhhhhhhhhhcch-hhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhcc--cccccc
Confidence            667899999998888888777776655 455655442   24456788899999999999998888765311  111111


Q ss_pred             HHHHH--HHHHHHHHh-hccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717          144 LYAFV--VLGFVFSII-AYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA  212 (263)
Q Consensus       144 ~~~~~--~~a~~l~~~-~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~  212 (263)
                      ...+.  ....+.... ............+++++-++.+...|.....-.+..|++.|++++++...--|+.
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~  391 (447)
T d1pw4a_         320 TGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLG  391 (447)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence            11111  112222221 1222222334556666667778888999999999999999999999987766653
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure