Citrus Sinensis ID: 024758
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 263 | ||||||
| 358249046 | 268 | uncharacterized protein LOC100810003 [Gl | 0.901 | 0.884 | 0.805 | 1e-111 | |
| 224127704 | 268 | predicted protein [Populus trichocarpa] | 0.901 | 0.884 | 0.810 | 1e-106 | |
| 255541628 | 268 | conserved hypothetical protein [Ricinus | 0.901 | 0.884 | 0.805 | 1e-105 | |
| 388500274 | 268 | unknown [Lotus japonicus] | 0.901 | 0.884 | 0.797 | 1e-105 | |
| 357507383 | 268 | hypothetical protein MTR_7g077870 [Medic | 0.901 | 0.884 | 0.793 | 1e-105 | |
| 297824659 | 268 | hypothetical protein ARALYDRAFT_904052 [ | 0.901 | 0.884 | 0.780 | 1e-102 | |
| 449441454 | 268 | PREDICTED: uncharacterized protein LOC10 | 0.893 | 0.876 | 0.808 | 1e-101 | |
| 225454274 | 268 | PREDICTED: uncharacterized protein LOC10 | 0.901 | 0.884 | 0.793 | 1e-100 | |
| 356568400 | 268 | PREDICTED: uncharacterized protein LOC10 | 0.901 | 0.884 | 0.789 | 1e-100 | |
| 18406942 | 268 | uncharacterized protein [Arabidopsis tha | 0.901 | 0.884 | 0.767 | 1e-100 |
| >gi|358249046|ref|NP_001239728.1| uncharacterized protein LOC100810003 [Glycine max] gi|255647823|gb|ACU24371.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/237 (80%), Positives = 214/237 (90%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M +LYALDFDGVICDSC E++LSA+KAA+VRWP LFDGVDS E+WI+DQMHT+RPVVET
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVDSTTENWIIDQMHTVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ +LLVRLLLE R P++RKSSVAEGLTVEGILENW K+KP+IMEEW E R+ LI+L G
Sbjct: 61 GYENVLLVRLLLESRTPTIRKSSVAEGLTVEGILENWSKLKPIIMEEWDEKRDDLIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRDEW++ DF TWIGANRLYPGVSDALK ASSR+YIVT+ QSRF + LLRELAGVTI P
Sbjct: 121 KVRDEWLEQDFATWIGANRLYPGVSDALKFASSRVYIVTTKQSRFADALLRELAGVTIPP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237
+R+YGLGTGPKV VLKQLQKKPEHQGL LHFVEDRLATLKNVIKEPELD WNLYLGN
Sbjct: 181 ERIYGLGTGPKVEVLKQLQKKPEHQGLTLHFVEDRLATLKNVIKEPELDQWNLYLGN 237
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127704|ref|XP_002320140.1| predicted protein [Populus trichocarpa] gi|222860913|gb|EEE98455.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/237 (81%), Positives = 215/237 (90%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LFD VDS L+DWIVDQMH +RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPVLFDTVDSTLQDWIVDQMHIVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLEMR+PS+RKSSVAEGLTV+GIL+NW KIKPVIMEEW+ENR+ALIEL G
Sbjct: 61 GYENLLLVRLLLEMRIPSIRKSSVAEGLTVDGILDNWSKIKPVIMEEWAENRDALIELFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRDEWMD D TWIGANR YPGV DALK ASS IYIVT+ QSRF + LL+ELAG+ I P
Sbjct: 121 KVRDEWMDNDLATWIGANRFYPGVPDALKFASSSIYIVTTKQSRFADALLQELAGLKIPP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237
+R+YGLGTGPKV VLKQLQ+KPEHQGL+LHFVEDRLATLKNVIK+PELDGWNLYLG+
Sbjct: 181 ERIYGLGTGPKVEVLKQLQRKPEHQGLKLHFVEDRLATLKNVIKDPELDGWNLYLGD 237
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541628|ref|XP_002511878.1| conserved hypothetical protein [Ricinus communis] gi|223549058|gb|EEF50547.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/237 (80%), Positives = 214/237 (90%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LFDGVDSALE+WIVDQM +RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSALEEWIVDQMFIVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLEMR+PS+RKSSVAEGLTVEGILENW K+KPVIMEEW E+R++LI L G
Sbjct: 61 GYENLLLVRLLLEMRMPSIRKSSVAEGLTVEGILENWSKLKPVIMEEWGEDRDSLIHLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
K+RDEWMD D TWI ANR YPGV DALK ASSRIYIVT+ QSRF + LLRELAG+TI P
Sbjct: 121 KIRDEWMDKDLATWIAANRFYPGVPDALKFASSRIYIVTTKQSRFADALLRELAGLTIPP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237
+++YGLGTGPKV VLKQLQ+KPE+QGL LHFVEDRLATLKNVIKEPELDGWNLYLG+
Sbjct: 181 EKIYGLGTGPKVKVLKQLQEKPEYQGLTLHFVEDRLATLKNVIKEPELDGWNLYLGD 237
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500274|gb|AFK38203.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/237 (79%), Positives = 214/237 (90%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M +LYALDFDGVICDSC E++LSA+KAA+VRWP LFDGV+SA +DWIVDQMH +RPVVET
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVNSATQDWIVDQMHAVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLE R PS+RKSSVAEGLTV+GILE W K+KPVIMEEW ENR+ALI+L G
Sbjct: 61 GYENLLLVRLLLETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGENRDALIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRDEW++ +F TWIGANR+YPGVSDALK ASSR+YIVT+ QSRF + +LRELAGVTI P
Sbjct: 121 KVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTKQSRFADAILRELAGVTIPP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237
+R+YGLG+GPKV VLKQLQKKPEHQG LHFVEDRLATLKNVIKEPELD WNLYLGN
Sbjct: 181 ERIYGLGSGPKVEVLKQLQKKPEHQGPTLHFVEDRLATLKNVIKEPELDQWNLYLGN 237
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507383|ref|XP_003623980.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|217073782|gb|ACJ85251.1| unknown [Medicago truncatula] gi|355498995|gb|AES80198.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|388518891|gb|AFK47507.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/237 (79%), Positives = 213/237 (89%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M +LYALDFDGVICDSC E++LSA+KAA+VRWP LFDGVDS +EDWIVDQMHT+RPVVET
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPVLFDGVDSTIEDWIVDQMHTVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLE R PS+RKSSVAEGL VEGILE+W +KP+IMEEW ENREALI+L G
Sbjct: 61 GYENLLLVRLLLETRTPSIRKSSVAEGLAVEGILESWSTLKPIIMEEWGENREALIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRDEW++ DF WIGANR+YPGVSDALK ASS+++IVT+ QSRF + LLRELAGVTI
Sbjct: 121 KVRDEWLEQDFAAWIGANRIYPGVSDALKFASSKVFIVTTKQSRFADALLRELAGVTIPS 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237
+R+YGLGTGPKV +LKQLQK+PEHQGL LHFVEDRLATLKNVIKEPELD WNLYLGN
Sbjct: 181 ERIYGLGTGPKVEILKQLQKRPEHQGLTLHFVEDRLATLKNVIKEPELDKWNLYLGN 237
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297824659|ref|XP_002880212.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] gi|297326051|gb|EFH56471.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/237 (78%), Positives = 211/237 (89%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LF+GVDSALE+WIVDQMH +RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLE R+PS+RKSSVAEGLTV+GILE+W KIKPVIME W E+++ALI+L G
Sbjct: 61 GYENLLLVRLLLETRIPSIRKSSVAEGLTVDGILESWAKIKPVIMEAWDEDKDALIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRD+W++ D TTWIGANR YPGVSDALK ASS+IYIVT+ Q RF E LLRE+AGV I
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237
+R+YGLG+GPKV VLK +Q KPEHQGL LHFVEDRLATLKNVIKEPELD WNLYLGN
Sbjct: 181 ERIYGLGSGPKVEVLKLIQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWNLYLGN 237
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441454|ref|XP_004138497.1| PREDICTED: uncharacterized protein LOC101221288 [Cucumis sativus] gi|449529778|ref|XP_004171875.1| PREDICTED: uncharacterized LOC101221288 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/235 (80%), Positives = 212/235 (90%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LFD V+S+LE+WIVDQM+T+RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDEVESSLENWIVDQMYTVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLEMRLPS+RKSSVAEGLTV GILENW K+KPVIMEEW ENR+ALI+L G
Sbjct: 61 GYENLLLVRLLLEMRLPSIRKSSVAEGLTVHGILENWSKLKPVIMEEWGENRDALIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRD+W+D D TWIGANR YPGVSDALK ASSRIYIVT+ Q RF + LLRELAGVTI P
Sbjct: 121 KVRDQWIDEDLATWIGANRFYPGVSDALKFASSRIYIVTTKQGRFADALLRELAGVTIPP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235
+R+YGLGTGPKV VLK LQK PEHQGL+LHFVEDRLATLKNVIKE ELDGWN+YL
Sbjct: 181 ERIYGLGTGPKVEVLKMLQKMPEHQGLKLHFVEDRLATLKNVIKESELDGWNIYL 235
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454274|ref|XP_002275801.1| PREDICTED: uncharacterized protein LOC100260183 [Vitis vinifera] gi|297745313|emb|CBI40393.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/237 (79%), Positives = 208/237 (87%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDG++CDSC E++LSAVKAA+VRWP LFDGVDS LEDWIVDQM +RPVVET
Sbjct: 1 MGDLYALDFDGILCDSCGESSLSAVKAAKVRWPGLFDGVDSKLEDWIVDQMFIIRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLEMRLPS+RKSSV EGLT+EGILENW K+KPVIMEEW E RE L++L G
Sbjct: 61 GYENLLLVRLLLEMRLPSIRKSSVVEGLTIEGILENWSKLKPVIMEEWDEKREPLVDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRDEWM+ D TWI ANR YPGV+DALK ASS++YIVT+ Q RF E LLRELAGVTI
Sbjct: 121 KVRDEWMEDDLATWIDANRFYPGVADALKFASSKVYIVTTKQGRFAEALLRELAGVTIPS 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237
+R+YGLGTGPKV VLKQLQK+ EHQGL LHFVEDRLATLKNVIKEPELDGWNLYLG
Sbjct: 181 ERIYGLGTGPKVEVLKQLQKQSEHQGLTLHFVEDRLATLKNVIKEPELDGWNLYLGK 237
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356568400|ref|XP_003552399.1| PREDICTED: uncharacterized protein LOC100809469 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/237 (78%), Positives = 212/237 (89%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M LYALDFDGVICDSC ETA+SA+KAA++RWP LFDGVDS +EDWIVDQM T+RPVVET
Sbjct: 1 MGHLYALDFDGVICDSCGETAISALKAAKLRWPPLFDGVDSTIEDWIVDQMITVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+TLLLVRLLLE R+PS+RKSSV+EGL VE ILENW K+KP+IMEEW+ENRE LI+L G
Sbjct: 61 GYETLLLVRLLLETRVPSIRKSSVSEGLKVEDILENWFKLKPIIMEEWNENREELIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRD+W++ DFT WIGANRLYPG +DAL+ ASS++YIVT+ QSRF + LLRELAGVTI P
Sbjct: 121 KVRDDWLERDFTGWIGANRLYPGTADALRFASSKVYIVTTKQSRFADALLRELAGVTIAP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237
+RLYGLGTGPKV VLK+LQK PEHQGL LHFVEDRLATLKNVIKEPELD WNLYL N
Sbjct: 181 ERLYGLGTGPKVEVLKKLQKMPEHQGLTLHFVEDRLATLKNVIKEPELDNWNLYLVN 237
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18406942|ref|NP_566060.1| uncharacterized protein [Arabidopsis thaliana] gi|30690184|ref|NP_850443.1| uncharacterized protein [Arabidopsis thaliana] gi|3702346|gb|AAC62903.1| expressed protein [Arabidopsis thaliana] gi|15292713|gb|AAK92725.1| unknown protein [Arabidopsis thaliana] gi|20197209|gb|AAM14973.1| expressed protein [Arabidopsis thaliana] gi|21280859|gb|AAM45106.1| unknown protein [Arabidopsis thaliana] gi|222423162|dbj|BAH19560.1| AT2G45990 [Arabidopsis thaliana] gi|330255533|gb|AEC10627.1| uncharacterized protein [Arabidopsis thaliana] gi|330255534|gb|AEC10628.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/237 (76%), Positives = 209/237 (88%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LF+GVDSALE+WIVDQMH +RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLE ++PS+RKSSVAEGLTV+GILE+W K KPVIME W E+R+AL++L G
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRD+W++ D TTWIGANR YPGVSDALK ASS+IYIVT+ Q RF E LLRE+AGV I
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237
+R+YGLG+GPKV VLK LQ KPEHQGL LHFVEDRLATLKNVIKEPELD W+LYLG
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWSLYLGT 237
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 263 | ||||||
| TAIR|locus:2050730 | 268 | AT2G45990 "AT2G45990" [Arabido | 0.897 | 0.880 | 0.720 | 1.5e-90 |
| TAIR|locus:2050730 AT2G45990 "AT2G45990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
Identities = 170/236 (72%), Positives = 194/236 (82%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LF+GVDSALE+WIVDQMH +RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYDTXXXXXXXXXXXXXXXXKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ KSSVAEGLTV+GILE+W K KPVIME W E+R+AL++L G
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRD+W++ D TTWIGANR YPGVSDALK ASS+IYIVT+ Q RF E LLRE+AGV I
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236
+R+YGLG+GPKV VLK LQ KPEHQGL LHFVEDRLATLKNVIKEPELD W+LYLG
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWSLYLG 236
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 263 237 0.00090 113 3 11 22 0.42 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 621 (66 KB)
Total size of DFA: 201 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.51u 0.13s 19.64t Elapsed: 00:00:01
Total cpu time: 19.51u 0.13s 19.64t Elapsed: 00:00:01
Start: Fri May 10 23:33:15 2013 End: Fri May 10 23:33:16 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 263 | |||
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 100.0 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 100.0 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 100.0 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 100.0 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 100.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.98 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.98 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.98 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.97 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.97 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.97 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.96 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| PLN02940 | 382 | riboflavin kinase | 99.96 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.96 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.96 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.96 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.95 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.95 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.95 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.94 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.94 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.94 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.94 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.94 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.93 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.93 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.93 | |
| PLN02811 | 220 | hydrolase | 99.93 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.93 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.92 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.92 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.91 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.91 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.91 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.9 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.89 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.88 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.86 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.86 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.85 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.85 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.83 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.82 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.81 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.8 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.8 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.8 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.79 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.79 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.79 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.78 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.73 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.72 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.7 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.69 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.69 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.67 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.67 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.67 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.66 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.64 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.62 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.61 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.58 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.57 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.57 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.56 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.56 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.54 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.54 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.53 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.51 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.45 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.44 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.44 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.39 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.37 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.36 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.35 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.35 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.32 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.31 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.27 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.26 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.25 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.23 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.22 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.14 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.13 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.09 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.08 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.07 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.06 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.04 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.03 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.02 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.02 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.02 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.9 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 98.89 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.87 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.87 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.85 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.84 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.75 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 98.75 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.67 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.66 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.51 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.48 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.46 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.43 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.41 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.4 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.39 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.37 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.32 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.31 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.25 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.24 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.23 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.21 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.11 | |
| PLN02887 | 580 | hydrolase family protein | 98.09 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.09 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.07 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.06 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.05 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.99 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 97.96 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.94 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 97.94 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 97.76 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.76 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.72 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.7 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.68 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.59 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.56 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 97.53 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.53 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.47 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 97.42 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.36 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.35 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.25 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.21 | |
| PLN02423 | 245 | phosphomannomutase | 97.15 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.77 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 96.73 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.71 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 96.59 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 96.56 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.47 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.43 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 96.41 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 96.26 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 96.14 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.0 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.98 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 95.95 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.92 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 95.65 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 95.33 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 95.24 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 95.13 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 95.07 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 95.06 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 94.96 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 94.84 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 94.55 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 94.54 | |
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 94.4 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.35 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 94.27 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 94.21 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 94.19 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 93.71 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 93.48 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 93.33 | |
| PRK00208 | 250 | thiG thiazole synthase; Reviewed | 93.03 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 92.66 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 92.56 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 92.3 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 92.19 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.15 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 92.03 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 92.0 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 91.92 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 91.66 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 91.52 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 91.35 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 91.13 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 90.91 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 90.82 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 90.61 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 89.89 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 89.61 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 89.61 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 89.25 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 89.18 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 89.03 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 88.58 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 88.46 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 88.06 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 87.97 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 87.97 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 87.87 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 86.33 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 86.17 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 85.12 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 85.12 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 85.1 | |
| PRK11840 | 326 | bifunctional sulfur carrier protein/thiazole synth | 84.74 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 84.17 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 83.76 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 82.92 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 82.9 | |
| CHL00162 | 267 | thiG thiamin biosynthesis protein G; Validated | 82.75 | |
| COG0761 | 294 | lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate redu | 82.61 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 82.5 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 82.26 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 82.19 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 82.03 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 81.99 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 80.37 |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=277.23 Aligned_cols=204 Identities=25% Similarity=0.245 Sum_probs=165.3
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.+.|+|||||||+||.+.+..+++++++++ |+++. ..+.++.+||.|.+.++. +.+...
T Consensus 3 ~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~ig~~~~~~~~-~~~~~~------ 62 (220)
T COG0546 3 MIKAILFDLDGTLVDSAEDILRAFNAALAEL------GLPPL-------DEEEIRQLIGLGLDELIE-RLLGEA------ 62 (220)
T ss_pred CCCEEEEeCCCccccChHHHHHHHHHHHHHc------CCCCC-------CHHHHHHHhcCCHHHHHH-HHhccc------
Confidence 4589999999999999999999999999999 44432 246899999999887663 333110
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.. +...+..+.++++|.+.|.+.. .+++||||.++|+ ++|++++|
T Consensus 63 --------~~----------------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i 110 (220)
T COG0546 63 --------DE----------------------EAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGI 110 (220)
T ss_pred --------cc----------------------hhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEE
Confidence 00 0011345566667776666655 5789999999999 89999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+|||++..++.+|++ +|+..||+.++|.+ .||+|+++..+++++|.+|++++|||||.+||++|++ ||+++
T Consensus 111 ~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~----Ag~~~ 185 (220)
T COG0546 111 VTNKPERELDILLKA-LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKA----AGVPA 185 (220)
T ss_pred EeCCcHHHHHHHHHH-hCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHH----cCCCE
Confidence 999999999999995 99999999999944 3599999999999999998899999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++|+|||++.+++. ...|..+++++.+|
T Consensus 186 v~v~~g~~~~~~l~-~~~~d~vi~~~~el 213 (220)
T COG0546 186 VGVTWGYNSREELA-QAGADVVIDSLAEL 213 (220)
T ss_pred EEEECCCCCCcchh-hcCCCEEECCHHHH
Confidence 99999998444444 66777777776654
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=255.74 Aligned_cols=203 Identities=19% Similarity=0.129 Sum_probs=159.3
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.++|+|||||||+||.+.+..+++.+++++ |++.. ..+.++..+|.|.+..+. ..+ .
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~-------~~~~~~~~~g~~~~~~~~-~~~-~------- 68 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAAR------GRAPI-------TLAQLRPVVSKGARAMLA-VAF-P------- 68 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHC------CCCCC-------CHHHHHHHhhhHHHHHHH-HHh-c-------
Confidence 7899999999999999999999999999999 44422 135677788887665431 111 0
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
. ++++..++....+++.|.+. .....++|||+.++|+ ++|++++|
T Consensus 69 ------~----------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~~~L~~L~~~g~~l~i 116 (229)
T PRK13226 69 ------E----------------------LDAAARDALIPEFLQRYEAL----IGTQSQLFDGVEGMLQRLECAGCVWGI 116 (229)
T ss_pred ------c----------------------CChHHHHHHHHHHHHHHHHh----hhhcCeeCCCHHHHHHHHHHCCCeEEE
Confidence 0 01112223334445554433 2334689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||++...+..+|++ +|+..+|+.+++++ .||+|+++.++++++|++|++|+||||+.+|+++|++ +|+++
T Consensus 117 ~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~----aG~~~ 191 (229)
T PRK13226 117 VTNKPEYLARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARA----AGMPS 191 (229)
T ss_pred ECCCCHHHHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHH----CCCcE
Confidence 999999999999995 99999999999865 2599999999999999999999999999999999997 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|+|+||++...+......|..+++++.+|
T Consensus 192 i~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (229)
T PRK13226 192 VAALWGYRLHDDDPLAWQADVLVEQPQLL 220 (229)
T ss_pred EEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence 99999998554444457788888887765
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=242.42 Aligned_cols=196 Identities=14% Similarity=0.059 Sum_probs=148.6
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.++|+|||||||+||.+.+..+.+.++++++ .+..+ .++++.++|......+ ..+
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~------~~~~~-------~~~~~~~~G~~~~~~~--~~~--------- 57 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYY------PNQYK-------REDVLPFIGPSLHDTF--SKI--------- 57 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhC------CCCCC-------HHHHHHHhCcCHHHHH--Hhc---------
Confidence 35899999999999999999999999999983 22111 1345566665533221 100
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.++..++....++..+. .......++|||+.++|+ ++|++++|
T Consensus 58 ------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~l~~L~~~g~~~~i 103 (214)
T PRK13288 58 ------------------------------DESKVEEMITTYREFNH----EHHDELVTEYETVYETLKTLKKQGYKLGI 103 (214)
T ss_pred ------------------------------CHHHHHHHHHHHHHHHH----HhhhhhcccCcCHHHHHHHHHHCCCeEEE
Confidence 11112222333444332 223345689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||+++..+..+|+. +|+..||+.|+|++ .+|+|+++.+++++++.+|++++|||||.+|+++|++ +|+++
T Consensus 104 ~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~----aG~~~ 178 (214)
T PRK13288 104 VTTKMRDTVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKN----AGTKT 178 (214)
T ss_pred EeCCCHHHHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----CCCeE
Confidence 999999999999996 99999999999975 2599999999999999999999999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMD 260 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~ 260 (263)
|+|.||+++++++.+ ..+..++.++.
T Consensus 179 i~v~~g~~~~~~l~~-~~~~~~i~~~~ 204 (214)
T PRK13288 179 AGVAWTIKGREYLEQ-YKPDFMLDKMS 204 (214)
T ss_pred EEEcCCCCCHHHHhh-cCcCEEECCHH
Confidence 999999998887753 33444444443
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=242.79 Aligned_cols=211 Identities=13% Similarity=0.020 Sum_probs=155.5
Q ss_pred cEEEEecCcccccCHH-HHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 3 DLYALDFDGVICDSCE-ETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~-di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
++|+|||||||+||.. .+..+++.+++++ |++. + .++++..+|.+....+. ..+ .
T Consensus 3 k~viFD~DGTLiDs~~~~~~~a~~~~~~~~------g~~~-~-------~~~~~~~~G~~~~~~~~-~~~-~-------- 58 (253)
T TIGR01422 3 EAVIFDWAGTTVDFGSFAPTQAFVEAFAEF------GVQI-T-------LEEARGPMGLGKWDHIR-ALL-K-------- 58 (253)
T ss_pred eEEEEeCCCCeecCCCccHHHHHHHHHHHc------CCCc-c-------HHHHHHhcCccHHHHHH-HHh-c--------
Confidence 7899999999999964 3467888899888 4431 1 23556667776544331 111 0
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhc--CCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~la 156 (263)
..+.. +.+.+.+| .+++.+++....|++.|.+. .....++|||+.++|+ ++|++++
T Consensus 59 --------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~e~L~~L~~~g~~l~ 119 (253)
T TIGR01422 59 --------MPAVA-------ERWRAKFGRLPTEADIEAIYEAFEPLQLAK----LAEYSSPIPGVIEVIAYLRARGIKIG 119 (253)
T ss_pred --------CHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HHhcCccCCCHHHHHHHHHHCCCeEE
Confidence 00111 11122222 23444455555555554432 2345789999999999 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCC-ceEEcCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhhHHHhhccCcCCC
Q 024758 157 IVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f-~~v~G~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
|+||+++..++.+|++ +|+..+| +.|+|++ .||+|+++..+++++|+. |++|+|||||.+|+++|++ ||
T Consensus 120 IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~----aG 194 (253)
T TIGR01422 120 STTGYTREMMDVVAPE-AALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRN----AG 194 (253)
T ss_pred EECCCcHHHHHHHHHH-HHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHH----CC
Confidence 9999999999999995 9999885 9999875 259999999999999995 9999999999999999998 99
Q ss_pred CcEEEEcCCCCC-----------------------hHHHHhhhhHhHHHhhhccc
Q 024758 231 WNLYLGNLFRFL-----------------------CHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 231 i~~v~v~wGy~~-----------------------~~~l~~~~~~~~~~~~~~~~ 262 (263)
+++|+|+||++. .++|. ..+|..|++++.+|
T Consensus 195 i~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~v~~~~~el 248 (253)
T TIGR01422 195 MWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLK-AAGAHYVIDTLAEL 248 (253)
T ss_pred CeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHH-hcCCCEehhcHHHH
Confidence 999999999973 23444 67898888888765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=236.89 Aligned_cols=201 Identities=18% Similarity=0.206 Sum_probs=151.0
Q ss_pred EEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccccc
Q 024758 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSV 84 (263)
Q Consensus 5 vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~~~ 84 (263)
|+|||||||+||.+.+..+++.+++++ |.++.. .+.++.++|.+....+. +.+.. .
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~------~~~~~~-------~~~~~~~~g~~~~~~~~-~~~~~-~--------- 56 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAAL------GLPPAT-------LARVIGFIGNGVPVLME-RVLAW-A--------- 56 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhcccHHHHHH-HHhhc-c---------
Confidence 689999999999999999999999998 443221 24556667776544321 21110 0
Q ss_pred ccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCC
Q 024758 85 AEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSN 161 (263)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK 161 (263)
+. ..+.+..++....+.+.|. +......++|||+.++|+ ++|++++|+||+
T Consensus 57 --~~--------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~ 110 (213)
T TIGR01449 57 --GQ--------------------EPDAQRVAELRKLFDRHYE----EVAGELTSVFPGVEATLGALRAKGLRLGLVTNK 110 (213)
T ss_pred --cc--------------------ccChHHHHHHHHHHHHHHH----HhccccCccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 00 0112222233333344433 333445789999999999 789999999999
Q ss_pred chHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 162 QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
+...++.+|++ +|+..+|+.++|++ .||+|+++.++++++|++|++|+|||||.+|+++|++ ||+++|+|.
T Consensus 111 ~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~----aG~~~i~v~ 185 (213)
T TIGR01449 111 PTPLARPLLEL-LGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARA----AGCPSVLLT 185 (213)
T ss_pred CHHHHHHHHHH-cCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHH----CCCeEEEEc
Confidence 99999999995 99999999999975 2599999999999999999999999999999999998 999999999
Q ss_pred CCCCChHHHHhhhhHhHHHhhhcc
Q 024758 238 LFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 238 wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
||+++.+++.. ..|..++.++.+
T Consensus 186 ~g~~~~~~l~~-~~a~~~i~~~~~ 208 (213)
T TIGR01449 186 YGYRYGEAIDL-LPPDVLYDSLNE 208 (213)
T ss_pred cCCCCCcchhh-cCCCeEeCCHHH
Confidence 99988776653 356666665544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-32 Score=234.33 Aligned_cols=203 Identities=14% Similarity=0.079 Sum_probs=155.4
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhcccc-ccccchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRP-VVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~-~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+|||||||+||.+.+..+.+.+++++ |++.. .++... ++|.+...++ +.+.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~~g~~~~~~~--~~~~-------- 56 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAA------GLSPT--------PEEVQSAWMGQSKIEAI--RALL-------- 56 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHc------CCCCC--------HHHHHHhhcCCCHHHHH--HHHH--------
Confidence 378999999999999999999999999988 44321 122333 6776654433 2111
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
+.++.+++..++....+++.|.+.+.. ...++|||+.++|+ ++|++++|
T Consensus 57 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~G~~~~L~~L~~~g~~~~i 108 (220)
T TIGR03351 57 -------------------------ALDGADEAEAQAAFADFEERLAEAYDD---GPPVALPGAEEAFRSLRSSGIKVAL 108 (220)
T ss_pred -------------------------hccCCCHHHHHHHHHHHHHHHHHHhcc---cCCccCCCHHHHHHHHHHCCCEEEE
Confidence 111222233334444455555443322 24589999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCC--CCCceEEcCCC----CCcHHHHHHHHhhCCCC-CCcEEEEcCChhhHHHhhccCcCCC
Q 024758 158 VTSNQSRFVETLLRELAGVT--ITPDRLYGLGT----GPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~--~~f~~v~G~~~----~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
+||+....++.+|++ +|+. .+|+.+++++. ||+|+++..++++++++ |++|+||||+..|+++|++ +|
T Consensus 109 vT~~~~~~~~~~l~~-~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~----aG 183 (220)
T TIGR03351 109 TTGFDRDTAERLLEK-LGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGIN----AG 183 (220)
T ss_pred EeCCchHHHHHHHHH-hhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHH----CC
Confidence 999999999999995 9998 99999999752 49999999999999997 7999999999999999998 99
Q ss_pred CcE-EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 231 WNL-YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 231 i~~-v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+++ |+|.||+.+.+++. ...+..++.++++|
T Consensus 184 ~~~~i~~~~g~~~~~~~~-~~~~~~~i~~~~~l 215 (220)
T TIGR03351 184 AGAVVGVLTGAHDAEELS-RHPHTHVLDSVADL 215 (220)
T ss_pred CCeEEEEecCCCcHHHHh-hcCCceeecCHHHH
Confidence 999 99999998888775 45677777777654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=241.51 Aligned_cols=203 Identities=12% Similarity=0.046 Sum_probs=148.1
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.++|+|||||||+||.+.+..+++.++++++.. .|.+ ... ....+.++|.+.+..+. ..+ .
T Consensus 21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~--~g~~-~~~------~~~~~~~~G~~~~~~~~-~~~-~------- 82 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFN--GGVP-ITE------EFFVENIAGKHNEDIAL-GLF-P------- 82 (248)
T ss_pred ccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccc--cCCC-CCH------HHHHHHcCCCCHHHHHH-HHc-C-------
Confidence 3489999999999999999999999999999311 0112 111 11245667776654331 111 0
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
. .. +...+....++..|.+. ......+|||+.++|+ ++|++++|
T Consensus 83 ------~-~~----------------------~~~~~~~~~~~~~y~~~----~~~~~~l~pgv~e~L~~L~~~g~~l~I 129 (248)
T PLN02770 83 ------D-DL----------------------ERGLKFTDDKEALFRKL----ASEQLKPLNGLYKLKKWIEDRGLKRAA 129 (248)
T ss_pred ------c-ch----------------------hhHHHHHHHHHHHHHHH----HHhcCCcCccHHHHHHHHHHcCCeEEE
Confidence 0 00 00011112233333332 2234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCCC----CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||+++..++..|++ +||..||+.|++++. ||+|+++..+++++|++|++|+||||+..|+++|++ ||+++
T Consensus 130 ~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~----aGi~~ 204 (248)
T PLN02770 130 VTNAPRENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVA----AGMPV 204 (248)
T ss_pred EeCCCHHHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHH----CCCEE
Confidence 999999999999995 999999999998762 599999999999999999999999999999999997 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
|+|.||+ ..+++. ...|..++.++.+
T Consensus 205 i~v~~g~-~~~~l~-~~~a~~vi~~~~e 230 (248)
T PLN02770 205 VGLTTRN-PESLLM-EAKPTFLIKDYED 230 (248)
T ss_pred EEEeCCC-CHHHHh-hcCCCEEeccchh
Confidence 9999996 455554 3456556555543
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=239.96 Aligned_cols=213 Identities=14% Similarity=0.037 Sum_probs=152.7
Q ss_pred CcEEEEecCcccccCHHH-HHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEE-TALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~d-i~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+|||||||+||... ...+++.+++++ |++. . .++++..+|.+....+ +.+..
T Consensus 4 ~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~------g~~~-~-------~~~~~~~~G~~~~~~~--~~~~~------- 60 (267)
T PRK13478 4 IQAVIFDWAGTTVDFGSFAPTQAFVEAFAQF------GVEI-T-------LEEARGPMGLGKWDHI--RALLK------- 60 (267)
T ss_pred eEEEEEcCCCCeecCCCccHHHHHHHHHHHc------CCCC-C-------HHHHHHhcCCCHHHHH--HHHHh-------
Confidence 489999999999999643 367888999888 4431 1 2345667776644332 11100
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcC--CHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (263)
..... ..+.+.+|. +++...+....+++.|.+. +.....+|||+.++|+ ++|+++
T Consensus 61 ---------~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~elL~~L~~~g~~l 120 (267)
T PRK13478 61 ---------MPRVA-------ARWQAVFGRLPTEADVDALYAAFEPLQIAK----LADYATPIPGVLEVIAALRARGIKI 120 (267)
T ss_pred ---------cHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HhhcCCCCCCHHHHHHHHHHCCCEE
Confidence 00000 111122222 2333444444555544332 3345689999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCC-CceEEcCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhhHHHhhccCcCC
Q 024758 156 YIVTSNQSRFVETLLRELAGVTIT-PDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELD 229 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~~~-f~~v~G~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~~~~A 229 (263)
+|+||+++..+..+|+. +|+..+ |+.|+|++ .||+|+++..+++++|+. +++|+|||||.+|+++|++ |
T Consensus 121 ~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~----a 195 (267)
T PRK13478 121 GSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLN----A 195 (267)
T ss_pred EEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHH----C
Confidence 99999999999999995 998877 48998875 249999999999999996 6999999999999999998 9
Q ss_pred CCcEEEEcCCCCC----h------------------HHHHhhhhHhHHHhhhccc
Q 024758 230 GWNLYLGNLFRFL----C------------------HILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 230 gi~~v~v~wGy~~----~------------------~~l~~~~~~~~~~~~~~~~ 262 (263)
|+++|+|+||++. . .+-+...+|..++.++.+|
T Consensus 196 G~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l 250 (267)
T PRK13478 196 GMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADL 250 (267)
T ss_pred CCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHH
Confidence 9999999999984 1 2334467888888888764
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=241.56 Aligned_cols=197 Identities=20% Similarity=0.122 Sum_probs=151.0
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.++++|||||||+||.+.+..+.+.+++++ |++..+ .+.++.++|...+.++ +.
T Consensus 62 ~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~~~~-------~~~~~~~~g~~~~~i~--~~----------- 115 (273)
T PRK13225 62 LQAIIFDFDGTLVDSLPTVVAIANAHAPDF------GYDPID-------ERDYAQLRQWSSRTIV--RR----------- 115 (273)
T ss_pred cCEEEECCcCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhCccHHHHH--HH-----------
Confidence 478999999999999999999999999998 443221 1334555554433221 11
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
++.+++..++....+++.|.. +....++|||+.++|+ ++|++++|+
T Consensus 116 --------------------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~pg~~e~L~~L~~~gi~laIv 164 (273)
T PRK13225 116 --------------------------AGLSPWQQARLLQRVQRQLGD-----CLPALQLFPGVADLLAQLRSRSLCLGIL 164 (273)
T ss_pred --------------------------cCCCHHHHHHHHHHHHHHHHh-----hcccCCcCCCHHHHHHHHHHCCCeEEEE
Confidence 122222223333444444322 2445789999999999 789999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
||+.+..++.+|++ +|+..+|+.|++.+. .+||+.+..++++++++|++|+||||+..|+++|++ ||+++|+|+
T Consensus 165 Sn~~~~~~~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~----AG~~~I~v~ 239 (273)
T PRK13225 165 SSNSRQNIEAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQ----VGLIAVAVT 239 (273)
T ss_pred eCCCHHHHHHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHH----CCCeEEEEe
Confidence 99999999999995 999999999988664 489999999999999999999999999999999997 999999999
Q ss_pred CCCCChHHHHhhhhHhHHHhhhcc
Q 024758 238 LFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 238 wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
||++..+++.+ .+|.-+++++.+
T Consensus 240 ~g~~~~~~l~~-~~ad~~i~~~~e 262 (273)
T PRK13225 240 WGFNDRQSLVA-ACPDWLLETPSD 262 (273)
T ss_pred cCCCCHHHHHH-CCCCEEECCHHH
Confidence 99999888773 456555555543
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=230.73 Aligned_cols=191 Identities=19% Similarity=0.177 Sum_probs=146.2
Q ss_pred EEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccccc
Q 024758 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSV 84 (263)
Q Consensus 5 vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~~~ 84 (263)
|+|||||||+||.+.+..+.+.+++++. |.+.. ..+.++.++|.+.+..+ +.+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~g~~~~~~~--~~~------------- 53 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVV-----GDGPA-------PFEEYRRHLGRYFPDIM--RIM------------- 53 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhc-----CCCCC-------CHHHHHHHhCccHHHHH--HHc-------------
Confidence 6899999999999999999999998852 22211 13456777777655433 111
Q ss_pred ccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCC
Q 024758 85 AEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSN 161 (263)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK 161 (263)
+ .+.+.. + .+...+.. .....++|||+.++|+ ++|++++|+||+
T Consensus 54 --~----------------------~~~~~~-~---~~~~~~~~-----~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~ 100 (205)
T TIGR01454 54 --G----------------------LPLEME-E---PFVRESYR-----LAGEVEVFPGVPELLAELRADGVGTAIATGK 100 (205)
T ss_pred --C----------------------CCHHHH-H---HHHHHHHH-----hhcccccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 1 110000 0 01111111 1235689999999999 789999999999
Q ss_pred chHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 162 QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
+...++..+++ +|+..+|+.++|.+ .||+|+++..+++++|++|++++||||+.+|+++|++ +|+++|+|+
T Consensus 101 ~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~----~Gi~~i~~~ 175 (205)
T TIGR01454 101 SGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARA----AGTATVAAL 175 (205)
T ss_pred chHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHH----cCCeEEEEE
Confidence 99999999995 99999999999875 2599999999999999999999999999999999998 999999999
Q ss_pred CCCCChHHHHhhhhHhHHHhhhcc
Q 024758 238 LFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 238 wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
||+++.+++.+ ..|.-++.++.+
T Consensus 176 ~g~~~~~~l~~-~~~~~~~~~~~~ 198 (205)
T TIGR01454 176 WGEGDAGELLA-ARPDFLLRKPQS 198 (205)
T ss_pred ecCCChhhhhh-cCCCeeeCCHHH
Confidence 99999988763 456556666544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=238.35 Aligned_cols=205 Identities=19% Similarity=0.182 Sum_probs=156.2
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|+++|+|||||||+||.+.+..+.+.+++++ |++.. ..++++.++|.|...++. ..+..
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~-------~~~~~~~~~g~~~~~~~~-~~l~~------- 70 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLEL------GRPPA-------GLEAVRHWVGNGAPVLVR-RALAG------- 70 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHc------CCCCC-------CHHHHHHHhChhHHHHHH-HHhcc-------
Confidence 6799999999999999999999999999999 44321 124567788888655431 22110
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
....++++++..++....+++.|.. . .....+|||+.++|+ ++|++++|
T Consensus 71 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~g~~e~L~~Lk~~g~~l~i 122 (272)
T PRK13223 71 -----------------------SIDHDGVDDELAEQALALFMEAYAD----S-HELTVVYPGVRDTLKWLKKQGVEMAL 122 (272)
T ss_pred -----------------------cccccCCCHHHHHHHHHHHHHHHHh----c-CcCCccCCCHHHHHHHHHHCCCeEEE
Confidence 0001123333344444445554432 1 234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||++...++.++++ +|+..+|+.|++++ .+|+|++++.+++++|+++++|+||||+.+|+++|++ +|+++
T Consensus 123 vTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~----aGi~~ 197 (272)
T PRK13223 123 ITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKA----AGVQC 197 (272)
T ss_pred EECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHH----CCCeE
Confidence 999999999999995 99999999999876 2499999999999999999999999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMD 260 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~ 260 (263)
++|.|||+..+.+.+ ..++.++.++.
T Consensus 198 i~v~~G~~~~~~l~~-~~~~~vi~~l~ 223 (272)
T PRK13223 198 VALSYGYNHGRPIAE-ESPALVIDDLR 223 (272)
T ss_pred EEEecCCCCchhhhh-cCCCEEECCHH
Confidence 999999988887764 34554544443
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=236.50 Aligned_cols=198 Identities=13% Similarity=0.079 Sum_probs=146.2
Q ss_pred cEEEEecCcccccCHHHHH-HHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 3 DLYALDFDGVICDSCEETA-LSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~-~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
|+|||||||||+||.+.++ .+++.+++++ |++... .+.++.++|.+....+. ..+..
T Consensus 25 k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~------G~~~~~-------~e~~~~~~G~~~~~~~~-~l~~~-------- 82 (260)
T PLN03243 25 LGVVLEWEGVIVEDDSELERKAWRALAEEE------GKRPPP-------AFLLKRAEGMKNEQAIS-EVLCW-------- 82 (260)
T ss_pred eEEEEeCCCceeCCchHHHHHHHHHHHHHc------CCCCCH-------HHHHHHhcCCCHHHHHH-HHhcc--------
Confidence 7899999999999987776 4778899998 444211 23566788887665431 22210
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
. .+.+...+....++..|... . ....++|||+.++|+ ++|++++|+
T Consensus 83 -----~----------------------~~~~~~~~l~~~~~~~~~~~-~---~~~~~l~pg~~e~L~~L~~~g~~l~I~ 131 (260)
T PLN03243 83 -----S----------------------RDFLQMKRLAIRKEDLYEYM-Q---GGLYRLRPGSREFVQALKKHEIPIAVA 131 (260)
T ss_pred -----C----------------------CCHHHHHHHHHHHHHHHHHH-H---ccCcccCCCHHHHHHHHHHCCCEEEEE
Confidence 0 01111122222233333211 1 124679999999999 789999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||++...++.+|++ +||..||+.|++++ .||+|+++..+++++|++|++|+|||||..|+++|++ ||+++|
T Consensus 132 Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~----aG~~~i 206 (260)
T PLN03243 132 STRPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHD----GCMKCV 206 (260)
T ss_pred eCcCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH----cCCEEE
Confidence 99999999999995 99999999999875 2599999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+|. |+.+.+++.. +..++.+.++|
T Consensus 207 ~v~-g~~~~~~l~~---ad~vi~~~~el 230 (260)
T PLN03243 207 AVA-GKHPVYELSA---GDLVVRRLDDL 230 (260)
T ss_pred EEe-cCCchhhhcc---CCEEeCCHHHH
Confidence 996 8887776542 44555555443
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=224.68 Aligned_cols=194 Identities=16% Similarity=0.105 Sum_probs=141.0
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.++|+|||||||+||.+.+..+++.+++++ |++.. +..+.++|.+....+ +.+..
T Consensus 3 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~---------~~~~~~~g~~~~~~~--~~~~~-------- 57 (218)
T PRK11587 3 CKGFLFDLDGTLVDSLPAVERAWSNWADRH------GIAPD---------EVLNFIHGKQAITSL--RHFMA-------- 57 (218)
T ss_pred CCEEEEcCCCCcCcCHHHHHHHHHHHHHHc------CCCHH---------HHHHHHcCCCHHHHH--HHHhc--------
Confidence 489999999999999999999999999999 55420 122334566654432 21111
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
+ .+++.+.+.+..+ ..|. .......++|||+.++|+ ++|++++|+
T Consensus 58 -----~----------------------~~~~~~~~~~~~~-~~~~----~~~~~~~~~~pg~~e~L~~L~~~g~~~~iv 105 (218)
T PRK11587 58 -----G----------------------ASEAEIQAEFTRL-EQIE----ATDTEGITALPGAIALLNHLNKLGIPWAIV 105 (218)
T ss_pred -----c----------------------CCcHHHHHHHHHH-HHHH----HhhhcCceeCcCHHHHHHHHHHcCCcEEEE
Confidence 0 0111111222211 1111 122345689999999998 799999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||++...+...++. .|+. +|+.+++.+ .||+|+++..+++++|++|++|+|||||..|+++|++ ||+++|
T Consensus 106 Tn~~~~~~~~~l~~-~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~----aG~~~i 179 (218)
T PRK11587 106 TSGSVPVASARHKA-AGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLA----AGCHVI 179 (218)
T ss_pred cCCCchHHHHHHHh-cCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHH----CCCEEE
Confidence 99999999999995 9985 567777754 3599999999999999999999999999999999997 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+|+||+.. .++ ..+..++.++++|
T Consensus 180 ~v~~~~~~-~~~---~~~~~~~~~~~el 203 (218)
T PRK11587 180 AVNAPADT-PRL---DEVDLVLHSLEQL 203 (218)
T ss_pred EECCCCch-hhh---ccCCEEecchhhe
Confidence 99999743 222 3466677777665
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=239.70 Aligned_cols=185 Identities=12% Similarity=0.073 Sum_probs=140.0
Q ss_pred cEEEEecCcccccCHHHHHHHH-HHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSA-VKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~-~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
++|||||||||+||.+.+...+ +..++++ |++... .+.++.++|.+....+. +.+..
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~------G~~~~~-------~e~~~~~~G~~~~~~l~-~ll~~-------- 189 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLTLAQEE------GKSPPP-------AFILRRVEGMKNEQAIS-EVLCW-------- 189 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHHHHHHc------CCCCCH-------HHHHHHhcCCCHHHHHH-HHhhc--------
Confidence 7899999999999999888744 4556677 444221 23567788877655431 21110
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
..+++..++....+++.|.+. ......+|||+.++|+ ++|++++|+
T Consensus 190 ---------------------------~~~~~~~e~l~~~~~~~y~~~----~~~~~~l~pGa~ElL~~Lk~~GiklaIa 238 (381)
T PLN02575 190 ---------------------------SRDPAELRRMATRKEEIYQAL----QGGIYRLRTGSQEFVNVLMNYKIPMALV 238 (381)
T ss_pred ---------------------------cCCHHHHHHHHHHHHHHHHHH----hccCCCcCcCHHHHHHHHHHCCCeEEEE
Confidence 011222233333444444332 2334689999999999 899999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCCC----CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||++...++.+|++ +||..||+.|+|++. ||+|++++.+++++|++|++|+|||||..||++|++ ||+++|
T Consensus 239 Sn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~----AGm~~I 313 (381)
T PLN02575 239 STRPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHD----ARMKCV 313 (381)
T ss_pred eCCCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----cCCEEE
Confidence 99999999999995 999999999999763 599999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChHHH
Q 024758 235 LGNLFRFLCHIL 246 (263)
Q Consensus 235 ~v~wGy~~~~~l 246 (263)
+|+||+ ...++
T Consensus 314 gV~~~~-~~~~l 324 (381)
T PLN02575 314 AVASKH-PIYEL 324 (381)
T ss_pred EECCCC-ChhHh
Confidence 999985 34443
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=216.15 Aligned_cols=203 Identities=16% Similarity=0.098 Sum_probs=148.3
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.++|+|||||||+||.+.+..+.+.+++++ |.+.. ..++++..+|...+..+ +.+.+..
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~------g~~~~-------~~~~~~~~~g~~~~~~~--~~~~~~~----- 65 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDIS-------RREELPDTLGLRIDQVV--DLWYARQ----- 65 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHC------CCCCC-------HHHHHHHhhCCCHHHHH--HHHHHhc-----
Confidence 4589999999999999999999999999988 33311 11345556665544332 1111100
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
+.......+....+++.+.+. ......+|||+.++|+ ++|++++|
T Consensus 66 ----------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i 113 (222)
T PRK10826 66 ----------------------------PWNGPSRQEVVQRIIARVISL----IEETRPLLPGVREALALCKAQGLKIGL 113 (222)
T ss_pred ----------------------------CCCCCCHHHHHHHHHHHHHHH----HhcCCCCCCCHHHHHHHHHHCCCeEEE
Confidence 000000112222333333222 2334689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||+....++.++++ +|+..+|+.+++++ .+|+|+++..+++++|++|++|+||||+.+|+++|++ ||+++
T Consensus 114 ~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~----aG~~~ 188 (222)
T PRK10826 114 ASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKA----ARMRS 188 (222)
T ss_pred EeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHH----cCCEE
Confidence 999999999999996 99999999999875 2499999999999999999999999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|+|.++....+... -.+..+..++..|
T Consensus 189 i~v~~~~~~~~~~~--~~~~~~~~~~~dl 215 (222)
T PRK10826 189 IVVPAPEQQNDPRW--ALADVKLESLTEL 215 (222)
T ss_pred EEecCCccCchhhh--hhhheeccCHHHH
Confidence 99999976654432 2356666666554
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=214.81 Aligned_cols=204 Identities=22% Similarity=0.221 Sum_probs=152.5
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.++|+|||||||+||.+....+.+.+++++ |.+... .+.++.++|.+...++. +.+.. .
T Consensus 6 ~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~------~~~~~~-------~~~~~~~~g~~~~~~~~-~~~~~-~------ 64 (226)
T PRK13222 6 IRAVAFDLDGTLVDSAPDLAAAVNAALAAL------GLPPAG-------EERVRTWVGNGADVLVE-RALTW-A------ 64 (226)
T ss_pred CcEEEEcCCcccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhCccHHHHHH-HHHhh-c------
Confidence 489999999999999999999999999888 333221 24566777877655431 22211 0
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
+ ...+.+..++....+.+.|.+ ......+++||+.++|+ ++|++++|+
T Consensus 65 -----~--------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~l~~~g~~~~i~ 115 (226)
T PRK13222 65 -----G--------------------REPDEELLEKLRELFDRHYAE----NVAGGSRLYPGVKETLAALKAAGYPLAVV 115 (226)
T ss_pred -----c--------------------CCccHHHHHHHHHHHHHHHHH----hccccCccCCCHHHHHHHHHHCCCeEEEE
Confidence 0 011223333334444444433 33335789999999999 689999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||+.....+.++++ +|+..+|+.+++.+ .+|+|++++.++++++.++++++||||+.+|+++|++ +|+++|
T Consensus 116 S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~----~g~~~i 190 (226)
T PRK13222 116 TNKPTPFVAPLLEA-LGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARA----AGCPSV 190 (226)
T ss_pred eCCCHHHHHHHHHH-cCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHH----CCCcEE
Confidence 99999999999995 99999999999875 3499999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+|.||+.+.+++. ...+..++.+.++
T Consensus 191 ~v~~g~~~~~~~~-~~~~~~~i~~~~~ 216 (226)
T PRK13222 191 GVTYGYNYGEPIA-LSEPDVVIDHFAE 216 (226)
T ss_pred EECcCCCCccchh-hcCCCEEECCHHH
Confidence 9999998766654 2334445555443
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=225.77 Aligned_cols=217 Identities=17% Similarity=0.146 Sum_probs=143.2
Q ss_pred cEEEEecCcccccCH-HHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 3 DLYALDFDGVICDSC-EETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~-~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
++|||||||||+||. +.+..+++.+++++ |+++.... .+....++. +|.|...+. +.+....++
T Consensus 41 k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~------G~~~~~~~--~~~~~~~~~-~g~~~~~~~--~~~~~~~~~---- 105 (286)
T PLN02779 41 EALLFDCDGVLVETERDGHRVAFNDAFKEF------GLRPVEWD--VELYDELLN-IGGGKERMT--WYFNENGWP---- 105 (286)
T ss_pred cEEEEeCceeEEccccHHHHHHHHHHHHHc------CCCCCCCC--HHHHHHHHc-cCCChHHHH--HHHHHcCCC----
Confidence 789999999999999 88889999999999 44211000 011122334 776654432 222110000
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccC-CCCcccHHHHHH---hCCCcEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGA-NRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~-~~lypGv~e~L~---~~g~~laI 157 (263)
..+. .....+++..++....+.+.+...|.+.+... .++|||+.++|+ ++|++++|
T Consensus 106 --------~~~~------------~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~I 165 (286)
T PLN02779 106 --------TSTI------------EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAV 165 (286)
T ss_pred --------cccc------------ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEE
Confidence 0000 00000111122222222222222233222222 489999999998 78999999
Q ss_pred EcCCchHHHHHHHHHhhCC---CCCCceEEcCC---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 158 VTSNQSRFVETLLRELAGV---TITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl---~~~f~~v~G~~---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
+||++...+..+|++ +++ ..+|+.+.+.+ .||+|+++.++++++|++|++|+||||+.+|+++|++ +|+
T Consensus 166 vTn~~~~~~~~~l~~-~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~----aG~ 240 (286)
T PLN02779 166 CSTSNEKAVSKIVNT-LLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKA----AGM 240 (286)
T ss_pred EeCCCHHHHHHHHHH-hccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHH----cCC
Confidence 999999999999995 643 33455553433 3599999999999999999999999999999999998 999
Q ss_pred cEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 232 NLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 232 ~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++|+|.||+++.+++. .+..+++++.++
T Consensus 241 ~~i~v~~g~~~~~~l~---~ad~vi~~~~~l 268 (286)
T PLN02779 241 RCIVTKSSYTADEDFS---GADAVFDCLGDV 268 (286)
T ss_pred EEEEEccCCccccccC---CCcEEECChhhc
Confidence 9999999999887762 566667766554
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=230.80 Aligned_cols=198 Identities=12% Similarity=0.100 Sum_probs=145.8
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
++|+|||||||+||.+.+..+++.+++++ |.+.. .++++..+|.+....+ .+.+..
T Consensus 12 k~VIFDlDGTLvDt~~~~~~a~~~~~~~~------G~~~~--------~~~~~~~~G~~~~~~~-~~~~~~--------- 67 (382)
T PLN02940 12 SHVILDLDGTLLNTDGIVSDVLKAFLVKY------GKQWD--------GREAQKIVGKTPLEAA-ATVVED--------- 67 (382)
T ss_pred CEEEECCcCcCCcCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHhcCCCHHHHH-HHHHHH---------
Confidence 78999999999999999999999999998 43311 1345667776554332 122111
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEc
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (263)
++.+. ..++....+++.+.+. + ....+|||+.++|+ ++|++++|+|
T Consensus 68 -------------------------~~~~~-~~~~~~~~~~~~~~~~----~-~~~~l~pGv~elL~~Lk~~g~~l~IvT 116 (382)
T PLN02940 68 -------------------------YGLPC-STDEFNSEITPLLSEQ----W-CNIKALPGANRLIKHLKSHGVPMALAS 116 (382)
T ss_pred -------------------------hCCCC-CHHHHHHHHHHHHHHH----H-ccCCCCcCHHHHHHHHHHCCCcEEEEe
Confidence 11110 0111222333333322 2 24689999999999 8999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 160 SNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 160 nK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
|+++..++..|++++|+..+|+.|++++ .||+|+++..+++++|++|++|+|||||..|+++|++ ||+++|+
T Consensus 117 n~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~----aGi~~I~ 192 (382)
T PLN02940 117 NSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKA----AGMEVIA 192 (382)
T ss_pred CCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHH----cCCEEEE
Confidence 9999999998873389999999999976 3599999999999999999999999999999999998 9999999
Q ss_pred EcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 236 GNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 236 v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|+||+..... ...+.-++.++.+|
T Consensus 193 v~~g~~~~~~---~~~ad~~i~sl~el 216 (382)
T PLN02940 193 VPSIPKQTHL---YSSADEVINSLLDL 216 (382)
T ss_pred ECCCCcchhh---ccCccEEeCCHhHc
Confidence 9999765432 23454455555543
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=212.73 Aligned_cols=121 Identities=21% Similarity=0.135 Sum_probs=104.8
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
..++|||+.++|+ ++|++++|+||++...++..|++ +|+..||+.|++++ .||+|+++..+++++|++|+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 3589999999999 78999999999999999999996 99999999999864 3599999999999999999999
Q ss_pred EEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 210 HFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 210 l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+|||||. +|+++|++ +|+++|+|.||+....++.....+..++.++.+|
T Consensus 171 ~~igDs~~~di~~A~~----aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKN----LGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred EEECCChHHHHHHHHH----CCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999998 89999998 9999999999987665544344455666666654
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-28 Score=202.96 Aligned_cols=178 Identities=17% Similarity=0.151 Sum_probs=130.8
Q ss_pred EEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccccc
Q 024758 4 LYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSS 83 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~~ 83 (263)
+|+|||||||+||.+.+..+.+.+++++ |++. . .+..+.+.|.+....+ .+.+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~-~-------~~~~~~~~g~~~~~~~-~~~~~~~--------- 56 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADEL------GIPF-D-------EEFNESLKGVSREDSL-ERILDLG--------- 56 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHc------CCCC-C-------HHHHHHhcCCChHHHH-HHHHHhc---------
Confidence 5899999999999999999999999888 4441 1 1234455555443332 1221110
Q ss_pred cccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcC
Q 024758 84 VAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTS 160 (263)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~Tn 160 (263)
+. .++++..++....+.+.|.+.+.. ....++||||.++|+ ++|++++|+||
T Consensus 57 ---~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~~L~~L~~~g~~~~i~s~ 111 (185)
T TIGR01990 57 ---GK--------------------KYSEEEKEELAERKNDYYVELLKE--LTPADVLPGIKNLLDDLKKNNIKIALASA 111 (185)
T ss_pred ---CC--------------------CCCHHHHHHHHHHHHHHHHHHHHh--cCCcccCccHHHHHHHHHHCCCeEEEEeC
Confidence 00 113333344444444555443322 223589999999999 78999999999
Q ss_pred CchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 161 K~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
+.. ...+|++ +|+..+|+.+++++ .+|+|+++..++++++++|++++||||+.+|+++|++ +|+++|+|
T Consensus 112 ~~~--~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~----aG~~~i~v 184 (185)
T TIGR01990 112 SKN--APTVLEK-LGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKA----AGMFAVGV 184 (185)
T ss_pred Ccc--HHHHHHh-cCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHH----cCCEEEec
Confidence 754 4678995 99999999999865 3599999999999999999999999999999999998 99999998
Q ss_pred c
Q 024758 237 N 237 (263)
Q Consensus 237 ~ 237 (263)
+
T Consensus 185 ~ 185 (185)
T TIGR01990 185 G 185 (185)
T ss_pred C
Confidence 5
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-28 Score=209.01 Aligned_cols=197 Identities=13% Similarity=0.084 Sum_probs=138.9
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.++|+|||||||+||.+.+..+.+.+++++ |++.. . .+..+.+.|......+ +.+
T Consensus 4 ~~~viFD~DGTL~d~~~~~~~a~~~~~~~~------g~~~~-~------~~~~~~~~g~~~~~~~--~~~---------- 58 (221)
T PRK10563 4 IEAVFFDCDGTLVDSEVICSRAYVTMFAEF------GITLS-L------EEVFKRFKGVKLYEII--DII---------- 58 (221)
T ss_pred CCEEEECCCCCCCCChHHHHHHHHHHHHHc------CCCCC-H------HHHHHHhcCCCHHHHH--HHH----------
Confidence 489999999999999999999999999888 44311 1 1123344444332221 111
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcC--CHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHHhCCCcEEEEc
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVT 159 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~~~g~~laI~T 159 (263)
.+.++. +.++ ....|++.+... +....++|||+.++|+.-+++++|+|
T Consensus 59 -----------------------~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~gv~~~L~~L~~~~~ivT 108 (221)
T PRK10563 59 -----------------------SKEHGVTLAKAE---LEPVYRAEVARL----FDSELEPIAGANALLESITVPMCVVS 108 (221)
T ss_pred -----------------------HHHhCCCCCHHH---HHHHHHHHHHHH----HHccCCcCCCHHHHHHHcCCCEEEEe
Confidence 111121 1111 112233333222 22356899999999996579999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCc-eEEcC-C---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 160 SNQSRFVETLLRELAGVTITPD-RLYGL-G---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 160 nK~~~~a~~iL~~~~gl~~~f~-~v~G~-~---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
|++...++..|++ +|+..+|+ .|+++ + .||+|+++..+++++|++|++|+||||+..||++|++ ||+++|
T Consensus 109 n~~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~----aG~~~i 183 (221)
T PRK10563 109 NGPVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIA----AGMEVF 183 (221)
T ss_pred CCcHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----CCCEEE
Confidence 9999999999995 99999995 66665 3 3599999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
++.++.+... +. ..+..++.++.+
T Consensus 184 ~~~~~~~~~~-~~--~~~~~~~~~~~~ 207 (221)
T PRK10563 184 YFCADPHNKP-ID--HPLVTTFTDLAQ 207 (221)
T ss_pred EECCCCCCcc-hh--hhhhHHHHHHHH
Confidence 9987765432 21 234445555544
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=204.46 Aligned_cols=175 Identities=13% Similarity=0.088 Sum_probs=127.8
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
++|+|||||||+||.+.+..+.+.+++++ |++. + .+.++.+.|......+ +.+....
T Consensus 6 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~------g~~~-~-------~~~~~~~~g~~~~~~~--~~~~~~~------- 62 (188)
T PRK10725 6 AGLIFDMDGTILDTEPTHRKAWREVLGRY------GLQF-D-------EQAMVALNGSPTWRIA--QAIIELN------- 62 (188)
T ss_pred eEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCC-C-------HHHHHHhcCCCHHHHH--HHHHHHh-------
Confidence 78999999999999999999999999998 4331 1 1244555665543322 1111100
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEEEcC
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTS 160 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI~Tn 160 (263)
+. ..+.+.+... +...|.+. ......+|||+ ++|+ .++++++|+||
T Consensus 63 ----~~--------------------~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~-e~L~~L~~~~~l~I~T~ 110 (188)
T PRK10725 63 ----QA--------------------DLDPHALARE---KTEAVKSM----LLDSVEPLPLI-EVVKAWHGRRPMAVGTG 110 (188)
T ss_pred ----CC--------------------CCCHHHHHHH---HHHHHHHH----HhccCCCccHH-HHHHHHHhCCCEEEEcC
Confidence 00 0111111111 11222221 12345789975 7777 56699999999
Q ss_pred CchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 161 K~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
+++..++..|++ +|+..||+.|++++ .||+|+++..+++++|++|++|+||||+.+|+++|++ ||+++|+|
T Consensus 111 ~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~----aG~~~i~~ 185 (188)
T PRK10725 111 SESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARA----AGMDAVDV 185 (188)
T ss_pred CchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHH----CCCEEEee
Confidence 999999999996 99999999999975 2599999999999999999999999999999999998 99999998
Q ss_pred c
Q 024758 237 N 237 (263)
Q Consensus 237 ~ 237 (263)
.
T Consensus 186 ~ 186 (188)
T PRK10725 186 R 186 (188)
T ss_pred c
Confidence 5
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=199.71 Aligned_cols=176 Identities=16% Similarity=0.135 Sum_probs=130.7
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.++|+|||||||+||.+....+.+.+++++ |++ .. .+....+.|.+....+ ...+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~-~~-------~~~~~~~~g~~~~~~~-~~~~---------- 55 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKY------GIE-FD-------KQYNTSLGGLSREDIL-RAIL---------- 55 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHc------CCC-CC-------HHHHHHcCCCCHHHHH-HHHH----------
Confidence 378999999999999999999999999988 433 11 1233444554433322 1111
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhh--cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~la 156 (263)
+.+ +++++.+++....+.+.|.+... .....+|||+.++|+ ++|++++
T Consensus 56 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~~i~ 108 (185)
T TIGR02009 56 ------------------------KLRKPGLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGIAVG 108 (185)
T ss_pred ------------------------HhcCCCCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCCeEE
Confidence 111 23334444444444444332211 234689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
|+||+ ..++.+|++ +|+..+|+.++|++ .+|+|+++..++++++++|++++|||||..|+++|++ +|++
T Consensus 109 i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~----~G~~ 181 (185)
T TIGR02009 109 LGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARA----AGMF 181 (185)
T ss_pred EEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----CCCe
Confidence 99999 668999995 99999999999865 3499999999999999999999999999999999998 9999
Q ss_pred EEEE
Q 024758 233 LYLG 236 (263)
Q Consensus 233 ~v~v 236 (263)
+|+|
T Consensus 182 ~i~v 185 (185)
T TIGR02009 182 AVAV 185 (185)
T ss_pred EeeC
Confidence 9986
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=229.56 Aligned_cols=203 Identities=15% Similarity=0.137 Sum_probs=144.1
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.++|+|||||||+||.+.+..+++.++++++.....+.. ...+.++.++|......+ +.+..
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~--------~~~~~~~~~~G~~~~~~~--~~l~~------- 302 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTV--------TPIDKYREIMGVPLPKVW--EALLP------- 302 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCC--------CCHHHHHHHcCCChHHHH--HHHhh-------
Confidence 6689999999999999999999999999998311000000 012356667776654432 11111
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
..+ .+..++....+++.|.... .....+||||+.++|+ ++|++++|
T Consensus 303 --------------------------~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~l~pG~~e~L~~Lk~~g~~l~I 351 (459)
T PRK06698 303 --------------------------DHS--LEIREQTDAYFLERLIENI---KSGKGALYPNVKEIFTYIKENNCSIYI 351 (459)
T ss_pred --------------------------hcc--hhHHHHHHHHHHHHhHHHH---hhcCCCcCCCHHHHHHHHHHCCCeEEE
Confidence 000 0001111122223322211 1234689999999998 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCCC---CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~---~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
+||++...++.+|++ +|+..||+.+++.+. +|||+++..++++++ +++|+|||||.+|+++|++ ||+++|
T Consensus 352 vS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~----AG~~~I 424 (459)
T PRK06698 352 ASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKD----NGLIAI 424 (459)
T ss_pred EeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHH----CCCeEE
Confidence 999999999999995 999999999998763 489999999998864 6899999999999999998 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+|.||+...+++. .+..++.++++
T Consensus 425 ~v~~~~~~~~~~~---~~d~~i~~l~e 448 (459)
T PRK06698 425 GCNFDFAQEDELA---QADIVIDDLLE 448 (459)
T ss_pred EEeCCCCcccccC---CCCEEeCCHHH
Confidence 9999998766553 34445555443
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-27 Score=200.21 Aligned_cols=169 Identities=14% Similarity=0.063 Sum_probs=121.1
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+|+. .+++.+++++ |++ .++++..+|.+....+. ..
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~------g~~----------~~~~~~~~g~~~~~~~~-~~---------- 49 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKY------NIP----------TDHILKMIQDERFRDPG-EL---------- 49 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhc------CCC----------HHHHHHHHhHhhhcCHH-HH----------
Confidence 88999999999999954 3566777777 443 13455666644221110 00
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIV 158 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI~ 158 (263)
++.+++.+.+.+..+++ ..+....++|||+.++|+ +++++++++
T Consensus 50 ---------------------------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~pG~~e~L~~L~~~~~~~i~ 95 (197)
T PHA02597 50 ---------------------------FGCDQELAKKLIEKYNN-------SDFIRYLSAYDDALDVINKLKEDYDFVAV 95 (197)
T ss_pred ---------------------------hcccHHHHHHHhhhhhH-------HHHHHhccCCCCHHHHHHHHHhcCCEEEE
Confidence 01122223333333332 123345689999999999 445688999
Q ss_pred cCCchHHHHHHHHHhhCCCC----CCceEEcCC-CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCC--CC
Q 024758 159 TSNQSRFVETLLRELAGVTI----TPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD--GW 231 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~----~f~~v~G~~-~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A--gi 231 (263)
||++......++++ +|+.. +|+.++|.+ .+|||+++..+++++| +++++|||||..|+++|++ | ||
T Consensus 96 Tn~~~~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~----a~~Gi 168 (197)
T PHA02597 96 TALGDSIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHE----ALSQL 168 (197)
T ss_pred eCCccchhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHH----HHcCC
Confidence 99988877767774 88764 567787755 4599999999999999 8889999999999999997 8 99
Q ss_pred cEEEEcCCCC
Q 024758 232 NLYLGNLFRF 241 (263)
Q Consensus 232 ~~v~v~wGy~ 241 (263)
++|+|+||+.
T Consensus 169 ~~i~~~~~~~ 178 (197)
T PHA02597 169 PVIHMLRGER 178 (197)
T ss_pred cEEEecchhh
Confidence 9999999976
|
2 hypothetical protein; Provisional |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=199.23 Aligned_cols=117 Identities=17% Similarity=0.187 Sum_probs=99.9
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhC-CCCCCc
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKP-EHQGLR 208 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l-~~~~~~ 208 (263)
..++|||+.++|+ ++ ++++|+||+....++.+|++ +|+..+|+.|++++ .||+|+++..+++++ |++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 4689999999999 55 99999999999999999996 99999999999865 259999999999999 999999
Q ss_pred EEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 209 ~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++||||+. +|+++|++ +|+++|+++||+.... ....+.-++.++++|
T Consensus 173 ~v~igD~~~~di~~A~~----~G~~~i~~~~~~~~~~---~~~~~~~~~~~~~el 220 (224)
T TIGR02254 173 VLMIGDSLTADIKGGQN----AGLDTCWMNPDMHPNP---DDIIPTYEIRSLEEL 220 (224)
T ss_pred eEEECCCcHHHHHHHHH----CCCcEEEECCCCCCCC---CCCCCceEECCHHHH
Confidence 99999998 79999998 9999999999976532 123444556665543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-26 Score=198.95 Aligned_cols=183 Identities=17% Similarity=0.154 Sum_probs=133.7
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.+++|||||||||||.+-...+...+++++ |++.. .+..+...|.+....+ ..+.....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~~---- 60 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEY------GIEIS--------DEEIRELHGGGIARII--DLLRKLAA---- 60 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHc------CCCCC--------HHHHHHHHCCChHHHH--HHHHHHhc----
Confidence 6799999999999999998888889999999 44321 1345555554422221 22211000
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.... .+... ....+++.. .......+++|||.++|+ ++|+++++
T Consensus 61 ------~~~~-------------------~~~~~---~~~~~~~~~-----~~~~~~~~~~pGv~~~l~~L~~~~i~~av 107 (221)
T COG0637 61 ------GEDP-------------------ADLAE---LERLLYEAE-----ALELEGLKPIPGVVELLEQLKARGIPLAV 107 (221)
T ss_pred ------CCcc-------------------cCHHH---HHHHHHHHH-----HhhhcCCCCCccHHHHHHHHHhcCCcEEE
Confidence 0000 00000 001111111 112345689999999999 78899999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||.++..++.+|+. +|+..||+.++.++ .||+|++++.+.+++|++|++|+.|+||.+.|++|++ |||.+
T Consensus 108 aS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~a----AGm~v 182 (221)
T COG0637 108 ASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKA----AGMRV 182 (221)
T ss_pred ecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHH----CCCEE
Confidence 999999999999996 99999999988754 3599999999999999999999999999999999997 99999
Q ss_pred EEEcCCCC
Q 024758 234 YLGNLFRF 241 (263)
Q Consensus 234 v~v~wGy~ 241 (263)
|+++-+..
T Consensus 183 v~v~~~~~ 190 (221)
T COG0637 183 VGVPAGHD 190 (221)
T ss_pred EEecCCCC
Confidence 99998544
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=204.04 Aligned_cols=195 Identities=12% Similarity=0.062 Sum_probs=129.1
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
|+|+|||||||+||.+.+..+.+.+++.++...+ .+.... ....+.++..++......
T Consensus 11 k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~----------------- 68 (238)
T PRK10748 11 SALTFDLDDTLYDNRPVILRTEQEALAFVQNYHP-ALRSFQ----NEDLQRLRQALREAEPEI----------------- 68 (238)
T ss_pred eeEEEcCcccccCChHHHHHHHHHHHHHHHHhCc-chhhCC----HHHHHHHHHHHHHhCchh-----------------
Confidence 7999999999999999999999988876621000 111000 001112222111110000
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEEEcC
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTS 160 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI~Tn 160 (263)
...+..........+++.+|++.+..+.....+...|.. |.....+|||+.++|+ +++++++|+||
T Consensus 69 -------~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn 136 (238)
T PRK10748 69 -------YHDVTRWRWRAIEQAMLDAGLSAEEASAGADAAMINFAK-----WRSRIDVPQATHDTLKQLAKKWPLVAITN 136 (238)
T ss_pred -------hCcHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----HhhcCCCCccHHHHHHHHHcCCCEEEEEC
Confidence 000000001112334556676654433333333333322 2234689999999999 66799999999
Q ss_pred CchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCC-hhhHHHhhccCcCCCCcEEE
Q 024758 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 161 K~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~Agi~~v~ 235 (263)
++.. ++ ++|+..||+.|++++ .||+|+++..+++++|++|++|+||||+ ..|+.+|++ +|+++++
T Consensus 137 ~~~~-----~~-~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~----aG~~~i~ 206 (238)
T PRK10748 137 GNAQ-----PE-LFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIR----CGMQACW 206 (238)
T ss_pred CCch-----HH-HCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHH----CCCeEEE
Confidence 8876 47 499999999999875 3599999999999999999999999999 599999998 9999999
Q ss_pred EcCCCC
Q 024758 236 GNLFRF 241 (263)
Q Consensus 236 v~wGy~ 241 (263)
|.-+.+
T Consensus 207 v~~~~~ 212 (238)
T PRK10748 207 INPENG 212 (238)
T ss_pred EcCCCc
Confidence 987654
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-26 Score=196.46 Aligned_cols=98 Identities=18% Similarity=0.201 Sum_probs=89.0
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCC-CCcE
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~-~~~~ 209 (263)
..++|||+.++|+ ++|++++|+||++...++..|++ +|+..+|+.|++++ .||+|+++..+++++|+. +++|
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence 4679999999999 77899999999999999999995 99999999999865 359999999999999975 5899
Q ss_pred EEEcCCh-hhHHHhhccCcCCCCcEEEEcCC
Q 024758 210 HFVEDRL-ATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 210 l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
+||||+. +|+++|++ +|+++|++.|+
T Consensus 172 ~~vgD~~~~Di~~A~~----aG~~~i~~~~~ 198 (224)
T PRK09449 172 LMVGDNLHSDILGGIN----AGIDTCWLNAH 198 (224)
T ss_pred EEEcCCcHHHHHHHHH----CCCcEEEECCC
Confidence 9999998 69999998 99999999854
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=191.83 Aligned_cols=178 Identities=15% Similarity=0.097 Sum_probs=121.7
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHH-------HHHHHHHhhcc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDT-------LLLVRLLLEMR 75 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~-------~i~~~~l~~~~ 75 (263)
.+|+|||||||+||.+.+..+++.++++++ +.+.. .++++.++|.|... ..+.+.+...
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 66 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFG------GVSVT-------HADIDHTKLAGNANNDWQLTHRLVVDGLNSA- 66 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHc------CCCCC-------HHHHHHHHHccCccCchHHHHHHHHHhhhcc-
Confidence 379999999999999999999999999993 22211 24567777765310 0011211100
Q ss_pred cccccccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhh--hh---ccccCCCCcccHHHHHH-
Q 024758 76 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTD--FT---TWIGANRLYPGVSDALK- 149 (263)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~--~~---~~~~~~~lypGv~e~L~- 149 (263)
. . ..+ .++...++....+++.|.... .. .......+.|++.++|+
T Consensus 67 -----------~-~----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 117 (197)
T TIGR01548 67 -----------S-S----------------ERV-RDAPTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRE 117 (197)
T ss_pred -----------c-c----------------hhc-cCCccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHH
Confidence 0 0 000 000111122233333333210 00 00012245566699998
Q ss_pred --hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC---CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 150 --LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 150 --~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~---~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
++|++++|+||+++..++.+|++ +|+..+|+.+++++. ||+|+++..+++++|+++++|+||||+.+|+++|++
T Consensus 118 l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 118 LHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred HHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHh
Confidence 78999999999999999999996 999999999998753 599999999999999999999999999999999986
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=233.71 Aligned_cols=201 Identities=16% Similarity=0.195 Sum_probs=146.9
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
++|+|||||||+||.+.+..+++.+++++ |++.. .++++.++|.+...++ +.+....
T Consensus 76 kaVIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~it--------~e~~~~~~G~~~~~~~--~~~~~~~------- 132 (1057)
T PLN02919 76 SAVLFDMDGVLCNSEEPSRRAAVDVFAEM------GVEVT--------VEDFVPFMGTGEANFL--GGVASVK------- 132 (1057)
T ss_pred CEEEECCCCCeEeChHHHHHHHHHHHHHc------CCCCC--------HHHHHHHhCCCHHHHH--HHHHHhc-------
Confidence 79999999999999999999999999998 44421 1345666776644322 1111100
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEc
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (263)
+.. +++.+ +..+.+.+.|.+.|... ....+|||+.++|+ ++|++++|+|
T Consensus 133 ----~l~-------------------~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~pG~~elL~~Lk~~G~~l~IvS 184 (1057)
T PLN02919 133 ----GVK-------------------GFDPD---AAKKRFFEIYLEKYAKP--NSGIGFPGALELITQCKNKGLKVAVAS 184 (1057)
T ss_pred ----CCC-------------------CCCHH---HHHHHHHHHHHHHhhhc--ccCccCccHHHHHHHHHhCCCeEEEEe
Confidence 000 01111 11222333333333221 12358999999999 8999999999
Q ss_pred CCchHHHHHHHHHhhCCC-CCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 160 SNQSRFVETLLRELAGVT-ITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 160 nK~~~~a~~iL~~~~gl~-~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
|+....++.+|++ +|+. .||+.+++.+ .||+|+++.+++++++++|++|+||||+..|+++|++ |||++|
T Consensus 185 n~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~----aGm~~I 259 (1057)
T PLN02919 185 SADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARA----AGMRCI 259 (1057)
T ss_pred CCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHH----cCCEEE
Confidence 9999999999996 9996 7899999876 2599999999999999999999999999999999997 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+|.||+ ..++|. ...|..+++++.+
T Consensus 260 ~v~~~~-~~~~L~-~~~a~~vi~~l~e 284 (1057)
T PLN02919 260 AVTTTL-SEEILK-DAGPSLIRKDIGN 284 (1057)
T ss_pred EECCCC-CHHHHh-hCCCCEEECChHH
Confidence 999997 556665 3455555555544
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.6e-26 Score=190.58 Aligned_cols=95 Identities=15% Similarity=0.166 Sum_probs=86.4
Q ss_pred CCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC---C-----CCcHHHHHHHHhhCCCCCCc
Q 024758 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---T-----GPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 137 ~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~---~-----~pkp~~l~~~l~~l~~~~~~ 208 (263)
..++|||+.++|+.-..+++|+||++...+..+|++ +|+..+|+.|++++ . ||+|+++..+++++|++|++
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 457999999999933368999999999999999996 99999999999864 2 79999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 209 LHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 209 ~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
++||||+..|+++|++ +|+++|+|
T Consensus 161 ~l~vgD~~~di~aA~~----~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKA----LGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHH----cCCEEeeC
Confidence 9999999999999998 99999876
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-25 Score=190.65 Aligned_cols=193 Identities=13% Similarity=0.101 Sum_probs=137.0
Q ss_pred cCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccccccccCc
Q 024758 9 FDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGL 88 (263)
Q Consensus 9 lDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~~~~~~~ 88 (263)
|||||+||.+.+..+++.+++++ |++ .. .+..+.++|.+....+ +.+.... +.
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~------g~~-~~-------~~~~~~~~G~~~~~~~--~~~~~~~-----------~~ 53 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARY------GKT-FD-------WSLKAKMMGKKAIEAA--RIFVEES-----------GL 53 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHc------CCC-CC-------HHHHHHccCCCHHHHH--HHHHHHh-----------CC
Confidence 79999999999999999999999 443 11 2346667887654432 2121100 00
Q ss_pred chHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCCchHH
Q 024758 89 TVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRF 165 (263)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~ 165 (263)
+.+ ...+.+.+ .++.+... ......+||||.++|+ ++|++++|+||+....
T Consensus 54 ~~~------------------~~~~~~~~----~~~~~~~~----~~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 54 SDS------------------LSPEDFLV----EREAMLQD----LFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CCC------------------CCHHHHHH----HHHHHHHH----HHhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 000 01111111 11222111 1234689999999999 7899999999998764
Q ss_pred HH-HHHHHhhCCCCCCceEEcCC------CCCcHHHHHHHHhhCC---CCCCcEEEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 166 VE-TLLRELAGVTITPDRLYGLG------TGPKVNVLKQLQKKPE---HQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 166 a~-~iL~~~~gl~~~f~~v~G~~------~~pkp~~l~~~l~~l~---~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
.. .+++ +.++..+|+.+++.+ .||+|+++..++++++ ++|++|+||||+..|+++|++ ||+++|+
T Consensus 108 ~~~~~~~-~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~----aG~~~i~ 182 (220)
T PLN02811 108 FDLKTQR-HGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN----AGMSVVM 182 (220)
T ss_pred HHHHHcc-cHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHH----CCCeEEE
Confidence 44 4555 368888999999866 2499999999999996 999999999999999999998 9999999
Q ss_pred EcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 236 GNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 236 v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|.||+.+...+ ..+..+++++.+|
T Consensus 183 v~~~~~~~~~~---~~~d~vi~~~~e~ 206 (220)
T PLN02811 183 VPDPRLDKSYC---KGADQVLSSLLDF 206 (220)
T ss_pred EeCCCCcHhhh---hchhhHhcCHhhC
Confidence 99998766533 2677788887665
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8e-25 Score=187.33 Aligned_cols=92 Identities=17% Similarity=0.239 Sum_probs=83.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
.++|||+.++|+ ++|++++|+||++.. .+..|++ +|+..+|+.|++++ .||+|+++..+++++|++|++++
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 479999999999 689999999999876 4788995 99999999999865 25999999999999999999999
Q ss_pred EEcCCh-hhHHHhhccCcCCCCcEEE
Q 024758 211 FVEDRL-ATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 211 ~VGDs~-~Di~aA~~~~~~Agi~~v~ 235 (263)
||||+. +||++|++ +|+++|+
T Consensus 182 ~IgD~~~~Di~~A~~----aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQGARA----AGWRALL 203 (203)
T ss_pred EECCCchHHHHHHHH----cCCeeeC
Confidence 999997 89999997 9999873
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-25 Score=192.78 Aligned_cols=105 Identities=12% Similarity=0.052 Sum_probs=95.2
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCc
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~ 208 (263)
...++|||+.++|+ ++|++++|+||++...++..|++ +|+..+|+.|++++ .||+|++++.+++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 34689999999999 78999999999999999999995 99999999999865 359999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCcCCCCc-EEEEcCCCCChHH
Q 024758 209 LHFVEDRLATLKNVIKEPELDGWN-LYLGNLFRFLCHI 245 (263)
Q Consensus 209 ~l~VGDs~~Di~aA~~~~~~Agi~-~v~v~wGy~~~~~ 245 (263)
|+|||||..|+++|++ ||++ +++|++|.+..++
T Consensus 169 ~l~igDs~~di~aA~~----aG~~~~~~v~~~~~~~~~ 202 (224)
T PRK14988 169 TLFIDDSEPILDAAAQ----FGIRYCLGVTNPDSGIAE 202 (224)
T ss_pred EEEEcCCHHHHHHHHH----cCCeEEEEEeCCCCCccc
Confidence 9999999999999997 9998 6899999876544
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-25 Score=188.41 Aligned_cols=108 Identities=16% Similarity=0.061 Sum_probs=92.8
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHH--HHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF--VETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~--a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~ 207 (263)
..++|||+.++|+ ++|++++|+||++... ....+.+ +++..+|+.|++++ .||+|+++..+++++|++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4689999999999 7899999999987654 4444553 78889999999865 35999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 208 RLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+|+||||+..|+++|++ +|+++|+|+++....+.|...
T Consensus 171 ~~l~i~D~~~di~aA~~----aG~~~i~v~~~~~~~~~l~~~ 208 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAA----LGITTIKVSDEEQAIHDLEKA 208 (211)
T ss_pred HeEEEcCCHHHHHHHHH----cCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999998 999999999887777766644
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.6e-24 Score=181.59 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=90.5
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
.++|||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.|++++ .||+|+++..+++++|++|++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 479999999999 77999999999999999999995 99999999999875 35999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
||||+.+|+++|++ +|+++|+|.-+
T Consensus 170 ~vgD~~~Di~~A~~----~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNPWDLGGAKK----FGFKTAWVNRP 194 (198)
T ss_pred EEeCCHHHHHHHHH----CCCcEEEecCC
Confidence 99999999999997 99999999865
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-24 Score=176.30 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=88.7
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
..++|||+.++|+ ++|++++|+||.+...++..+++ +|+..+|+.+++++ .||+|+.+..+++++|++|+++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4589999999999 69999999999999999999996 99999999999865 3599999999999999999999
Q ss_pred EEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 210 HFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 210 l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
+||||+..|+++|++ +|+.+|+|
T Consensus 154 ~~vgD~~~d~~~A~~----~G~~~i~v 176 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKE----AGIKTIWV 176 (176)
T ss_dssp EEEESSHHHHHHHHH----TTSEEEEE
T ss_pred EEEeCCHHHHHHHHH----cCCeEEeC
Confidence 999999999999998 99999986
|
... |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-24 Score=188.67 Aligned_cols=100 Identities=8% Similarity=-0.086 Sum_probs=86.1
Q ss_pred ccCCCCcccHHHHHH---hCCCcEEEEcCC----chHHHHHHHHHhhCCCCCCceEEcCCCC--CcHHHHHHHHhhCCCC
Q 024758 135 IGANRLYPGVSDALK---LASSRIYIVTSN----QSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQ 205 (263)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~laI~TnK----~~~~a~~iL~~~~gl~~~f~~v~G~~~~--pkp~~l~~~l~~l~~~ 205 (263)
...+.++||+.++|+ ++|++++||||| ++..++.++++ +|+..+|+.|+|++.. +||+.. .+++++++
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i- 186 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI- 186 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCCCCHH-HHHHhCCC-
Confidence 445689999999999 899999999998 88899999995 9999999999997642 566555 45666776
Q ss_pred CCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 206 ~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
++||||+.+|+.+|++ ||+++++|+|||++..
T Consensus 187 ---~i~vGDs~~DI~aAk~----AGi~~I~V~~g~~s~~ 218 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKE----AGARGIRILRASNSTY 218 (237)
T ss_pred ---eEEEeCCHHHHHHHHH----CCCCEEEEEecCCCCC
Confidence 6999999999999997 9999999999999764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=166.72 Aligned_cols=85 Identities=19% Similarity=0.222 Sum_probs=77.8
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC---CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~---~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
...++||+.++|+ ++|++++|+||+++..+...++. + +..+|+.|++++ .||+|+++.++++++|+++ +|+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 3467899999999 78999999999999999999995 7 888999999865 3599999999999999999 999
Q ss_pred EEcCChhhHHHhhc
Q 024758 211 FVEDRLATLKNVIK 224 (263)
Q Consensus 211 ~VGDs~~Di~aA~~ 224 (263)
||||+..|+++|++
T Consensus 139 ~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 139 HVGDNLNDIEGARN 152 (154)
T ss_pred EEeCCHHHHHHHHH
Confidence 99999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=173.49 Aligned_cols=106 Identities=12% Similarity=0.146 Sum_probs=93.9
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
.+|||+.++|+ ++|++++|+||++.......+.+..++..+|+.|++++ .||+|+++..+++++|++|++|+|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 58999999999 78999999999999988877764248889999999875 359999999999999999999999
Q ss_pred EcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 212 VEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
|||+..|+++|++ +|+++++++++..-++.|..
T Consensus 164 vgD~~~di~aA~~----aG~~~i~~~~~~~~~~~l~~ 196 (199)
T PRK09456 164 FDDNADNIEAANA----LGITSILVTDKQTIPDYFAK 196 (199)
T ss_pred eCCCHHHHHHHHH----cCCEEEEecCCccHHHHHHh
Confidence 9999999999998 99999999998776665553
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.7e-22 Score=165.29 Aligned_cols=93 Identities=20% Similarity=0.223 Sum_probs=85.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
.+++||+.++|+ ++|++++|+||.+... ..++.+ +|+..+|+.|++++ .||+|+++..+++++|++|++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 589999999999 7899999999999998 777774 99999999998754 35999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
||||+..|+++|++ +|+.+|+|
T Consensus 162 ~vgD~~~di~aA~~----~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKA----AGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHH----cCCEEEeC
Confidence 99999999999998 99999975
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.7e-22 Score=164.94 Aligned_cols=83 Identities=18% Similarity=0.195 Sum_probs=76.4
Q ss_pred CCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEE
Q 024758 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 137 ~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
...+|||+.++|+ +++|+||++....+..+++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+||
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 3579999999997 5899999999999999995 99999999998865 2599999999999999999999999
Q ss_pred cCChhhHHHhhc
Q 024758 213 EDRLATLKNVIK 224 (263)
Q Consensus 213 GDs~~Di~aA~~ 224 (263)
||+.+|+++|++
T Consensus 163 gD~~~Di~~A~~ 174 (175)
T TIGR01493 163 AAHQWDLIGARK 174 (175)
T ss_pred ecChhhHHHHhc
Confidence 999999999985
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-21 Score=166.60 Aligned_cols=116 Identities=16% Similarity=0.264 Sum_probs=87.6
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC--CCCce---------EEcCC-------CCCcHHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT--ITPDR---------LYGLG-------TGPKVNVLK 196 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~--~~f~~---------v~G~~-------~~pkp~~l~ 196 (263)
.++|||+.++|+ ++|++++|+||+.+..++.++++ +|+. .+|+. +.|.+ .++||+.++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 469999999999 88999999999999999999995 9997 35532 33322 127999999
Q ss_pred HHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 197 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 197 ~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
.++++++. ++++||||+.+|+.+|++ +|+.++. .||++...+.. ...|.-++.++++|
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~----~~~~~~~-~~~~~~~~~~~-~~~~~~~i~~~~el 219 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEARKP----GGADLFI-GYGGVQVREAV-AAKADWFVTDFQDL 219 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHhhhc----CCCCEEE-ecCCCccCHHH-HhcCCEEECCHHHH
Confidence 99998875 689999999999999875 7887654 46654433433 23555566666543
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-21 Score=163.34 Aligned_cols=105 Identities=15% Similarity=0.061 Sum_probs=89.7
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhhCCC---------CCCceEEcCCCC----CcHHHHHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAGVT---------ITPDRLYGLGTG----PKVNVLKQLQ 199 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK-~~~~a~~iL~~~~gl~---------~~f~~v~G~~~~----pkp~~l~~~l 199 (263)
...+||||.++|+ ++|++++|+||+ +...++.+|+. +|+. .+|+.+++++.. |.|+++..+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 4689999999999 799999999999 99999999995 9998 999999997643 3344555555
Q ss_pred hhC--CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 200 KKP--EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 200 ~~l--~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
+.+ |++|++|+||||+..|+++|++ ||+++++++||+...+.+
T Consensus 122 ~~~~~gl~p~e~l~VgDs~~di~aA~~----aGi~~i~v~~g~~~~~~~ 166 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRTDNVREVWG----YGVTSCYCPSGMDKGTFK 166 (174)
T ss_pred hcccCCCCHHHeEEEcChhHhHHHHHH----hCCEEEEcCCCccHHHHH
Confidence 555 7999999999999999999997 999999999998766644
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-21 Score=163.08 Aligned_cols=114 Identities=18% Similarity=0.147 Sum_probs=91.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEEcC-----C----CCCc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL-----G----TGPK 191 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~-----~----~~pk 191 (263)
.+|||+.++|+ ++|++++|+||++. +....+|++ +|+ +|+.+++. + .||+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCCCCC
Confidence 68999999999 78999999999973 445567774 777 46766642 1 3599
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhH--hHHHhhhcc
Q 024758 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYA--VALFAKMDV 261 (263)
Q Consensus 192 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~--~~~~~~~~~ 261 (263)
|+++..+++++|+++++++||||+.+|+++|++ +|+++|+|.||+...+ +. ...+ ..++.++.+
T Consensus 106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~----aG~~~i~v~~g~~~~~-~~-~~~~~~~~ii~~l~e 171 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAA----AGVTPVLVRTGKGVTT-LA-EGAAPGTWVLDSLAD 171 (181)
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHH----CCCeEEEEcCCCCchh-hh-cccCCCceeecCHHH
Confidence 999999999999999999999999999999998 9999999999987443 32 2334 556666654
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.8e-20 Score=159.48 Aligned_cols=91 Identities=16% Similarity=0.122 Sum_probs=79.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE------------EcCCC--CCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------------YGLGT--GPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v------------~G~~~--~pkp~~l~~~l~ 200 (263)
.+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+.. .|... +|||+++..+++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 579999999999 78999999999999999999996 9998888532 22211 269999999999
Q ss_pred hCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 201 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
++++++++|+||||+.+|+.+|++ +|+.+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~----ag~~i 191 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKA----AGLGI 191 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHh----CCCeE
Confidence 999999999999999999999997 89864
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.5e-20 Score=155.11 Aligned_cols=97 Identities=10% Similarity=0.031 Sum_probs=81.3
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-C-------------CCcHHHHHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------GPKVNVLKQLQ 199 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~-------------~pkp~~l~~~l 199 (263)
..++|||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.++..+ . .+|++.+..++
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 3579999999999 78999999999999999999995 99988776554321 1 13457888999
Q ss_pred hhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcC
Q 024758 200 KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 200 ~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~w 238 (263)
+++++++++++|||||.+|+.+|++ ||++++.-.-
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~----ag~~~a~~~~ 191 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEV----ADISISLGDE 191 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHh----cCCeEEECCC
Confidence 9999999999999999999999987 8997765443
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=153.25 Aligned_cols=94 Identities=15% Similarity=0.062 Sum_probs=74.3
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEE---------cCCCCCcHHHHHHHHhhCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY---------GLGTGPKVNVLKQLQKKPEH 204 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~---------G~~~~pkp~~l~~~l~~l~~ 204 (263)
..++|||+.++|+ ++ ++++|+||+....++.++++ +|+..+|+..+ |.+ .++|+....++++++.
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~-~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYD-LRQPDGKRQAVKALKS 142 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECcc-ccccchHHHHHHHHHH
Confidence 4689999999999 55 99999999999999999996 99988875432 222 2455555666667777
Q ss_pred CCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCC
Q 024758 205 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 205 ~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
.+++++|||||.+|+.++++ +|+ +|.|++
T Consensus 143 ~~~~~v~iGDs~~D~~~~~a----a~~---~v~~~~ 171 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGE----ADA---GILFRP 171 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHh----CCC---CEEECC
Confidence 78899999999999999987 776 344665
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-19 Score=158.85 Aligned_cols=99 Identities=11% Similarity=-0.008 Sum_probs=83.2
Q ss_pred ccccCCCCcccHHHHHH---hCCCcEEEEcC----CchHHHHHHHHHhhCC--CCCCceEEcCCC--CCcHHHHHHHHhh
Q 024758 133 TWIGANRLYPGVSDALK---LASSRIYIVTS----NQSRFVETLLRELAGV--TITPDRLYGLGT--GPKVNVLKQLQKK 201 (263)
Q Consensus 133 ~~~~~~~lypGv~e~L~---~~g~~laI~Tn----K~~~~a~~iL~~~~gl--~~~f~~v~G~~~--~pkp~~l~~~l~~ 201 (263)
++...+.||||+.++|+ ++|++++++|| |.+..++.+++. +|+ ..+|+.++|++. +|++.. ++++
T Consensus 108 ~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K~~K~~---~l~~ 183 (237)
T PRK11009 108 GWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQYTKTQ---WLKK 183 (237)
T ss_pred cccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCCCCHHH---HHHh
Confidence 34556899999999999 89999999999 567789999984 999 899999998774 344432 4556
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCCh
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
+++ ++||||+.+|+++|++ ||+++|+|.|||++.
T Consensus 184 ~~i----~I~IGDs~~Di~aA~~----AGi~~I~v~~G~~~~ 217 (237)
T PRK11009 184 KNI----RIFYGDSDNDITAARE----AGARGIRILRAANST 217 (237)
T ss_pred cCC----eEEEcCCHHHHHHHHH----cCCcEEEEecCCCCC
Confidence 666 7999999999999998 999999999999864
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-19 Score=144.15 Aligned_cols=94 Identities=30% Similarity=0.302 Sum_probs=81.5
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCc--------hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhC-CCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQ--------SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP-EHQG 206 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~--------~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l-~~~~ 206 (263)
.+|||+.++|+ ++|++++|+||++ ...++.++++ +|+..++..+.+...||+|+++..+++++ +++|
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 103 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDP 103 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCChHHHHHHHHHcCCCCh
Confidence 68999999998 7999999999999 8889999995 99974443333323469999999999999 5999
Q ss_pred CcEEEEcC-ChhhHHHhhccCcCCCCcEEEEc
Q 024758 207 LRLHFVED-RLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 207 ~~~l~VGD-s~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
++++|||| +..|+++|++ +|+++|++.
T Consensus 104 ~~~v~IGD~~~~Di~~A~~----~Gi~~i~~~ 131 (132)
T TIGR01662 104 EESVYVGDQDLTDLQAAKR----AGLAFILVA 131 (132)
T ss_pred hheEEEcCCCcccHHHHHH----CCCeEEEee
Confidence 99999999 7999999998 999999874
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-19 Score=152.79 Aligned_cols=119 Identities=13% Similarity=-0.021 Sum_probs=94.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchH--------HHHHHHHHhhCCCCCCceEE-cCC----CCCcHHHHHHHHhh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSR--------FVETLLRELAGVTITPDRLY-GLG----TGPKVNVLKQLQKK 201 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~--------~a~~iL~~~~gl~~~f~~v~-G~~----~~pkp~~l~~~l~~ 201 (263)
..+||||.++|+ ++|++++|+||++.. .....++. +|++.+|..+. +++ .||+|+++.+++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 478999999999 789999999999852 23445774 88876654333 222 36999999999999
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCCh------HHHHhhhhHhHHHhhhccc
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLC------HILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~------~~l~~~~~~~~~~~~~~~~ 262 (263)
++.+|++|+||||+..|+++|++ +|+.+|+|.||++.. +++ ....+..++.++++|
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~~~~~l-~~~~~~~~~~~~~el 167 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAK----VNATTILVRTGAGYDALHTYRDKW-AHIEPNYIAENFEDA 167 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHH----CCCeEEEEecCCCchhhhhhhccc-ccCCCcchhhCHHHH
Confidence 99999999999999999999998 999999999999763 222 245577777766543
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.6e-19 Score=154.24 Aligned_cols=91 Identities=14% Similarity=0.121 Sum_probs=71.9
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC--CC--ceEEcCC----CCCcHHHH----------
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--TP--DRLYGLG----TGPKVNVL---------- 195 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~--~f--~~v~G~~----~~pkp~~l---------- 195 (263)
..++|||+.++|+ ++|++++|+||+...+++.+|++ + +.. .+ +..++++ .+|+|++.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 4689999999999 89999999999999999999996 7 643 11 2223322 12555542
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
..++++++..+.+++|||||.+|+.+|++ ||+.+
T Consensus 150 ~~~l~~~~~~~~~~i~iGDs~~Di~aa~~----Ag~~~ 183 (219)
T PRK09552 150 PSLIRKLSDTNDFHIVIGDSITDLEAAKQ----ADKVF 183 (219)
T ss_pred HHHHHHhccCCCCEEEEeCCHHHHHHHHH----CCcce
Confidence 46788889999999999999999999987 89844
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=8e-18 Score=145.76 Aligned_cols=100 Identities=20% Similarity=0.091 Sum_probs=88.2
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..++||++.+.|+ .+.++++|+||-........|++ +||..+||.|+.++ .||+|+++..+++++|++|++++
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 3689999999999 33388999999999999999996 99999999999876 35999999999999999999999
Q ss_pred EEcCChhhH-HHhhccCcCCCCcEEEEcCCCC
Q 024758 211 FVEDRLATL-KNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 211 ~VGDs~~Di-~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
||||+.... .+|++ +|+++|++.-+..
T Consensus 176 ~VgD~~~~di~gA~~----~G~~~vwi~~~~~ 203 (229)
T COG1011 176 FVGDSLENDILGARA----LGMKTVWINRGGK 203 (229)
T ss_pred EECCChhhhhHHHHh----cCcEEEEECCCCC
Confidence 999998666 99987 9999998876653
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.1e-19 Score=150.55 Aligned_cols=116 Identities=20% Similarity=0.153 Sum_probs=95.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEEcC------------C
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL------------G 187 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~------------~ 187 (263)
.++||||.++|+ ++|++++|+||++. .....++++ +|+. |+.++.. +
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCcccccccCC
Confidence 368999999999 79999999999995 455567775 7776 6665531 1
Q ss_pred ---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE-EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 188 ---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 188 ---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~-v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
.||+|+++..+++++|+++++|+||||+.+||++|++ ||+++ ++|.||++....+ ...|..+++++++|
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~----aG~~~~i~v~~g~~~~~~~--~~~ad~~i~~~~el 174 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVA----AKVKTNVLVRTGKPITPEA--ENIADWVLNSLADL 174 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHH----CCCcEEEEEecCCcccccc--cccCCEEeccHHHh
Confidence 3599999999999999999999999999999999998 99998 8999998743322 24577888887765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=146.39 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=91.5
Q ss_pred HHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh---CCCCCCceEEcCC--CCCcHHHHHH
Q 024758 126 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGLG--TGPKVNVLKQ 197 (263)
Q Consensus 126 y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~---gl~~~f~~v~G~~--~~pkp~~l~~ 197 (263)
|++.|..+ ....++|||+.++|+ ++|++++|+||++....+.++++ + ++..+|+.++... .||+|+++..
T Consensus 83 w~~~Y~~~-~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~g~KP~p~~y~~ 160 (220)
T TIGR01691 83 WRQGYESG-ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTVGLKTEAQSYVK 160 (220)
T ss_pred HHHHHhcC-CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCcccCCCHHHHHH
Confidence 33334333 345689999999999 88999999999999999999884 6 5655555544221 4699999999
Q ss_pred HHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 198 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 198 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
+++++|++|++++||||+..|+++|++ ||+++++|.|+.+.
T Consensus 161 i~~~lgv~p~e~lfVgDs~~Di~AA~~----AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 161 IAGQLGSPPREILFLSDIINELDAARK----AGLHTGQLVRPGND 201 (220)
T ss_pred HHHHhCcChhHEEEEeCCHHHHHHHHH----cCCEEEEEECCCCC
Confidence 999999999999999999999999998 99999999998643
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.6e-17 Score=135.72 Aligned_cols=87 Identities=13% Similarity=0.199 Sum_probs=75.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-----------------------C-C
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----------------------G-P 190 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-----------------------~-p 190 (263)
.+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.|+|.+. + +
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 589999999999 78999999999999999999995 999999999997421 1 5
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 191 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
|++++.+++++. +++++||||+.+|+.+|++ |++-
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~----~d~~ 184 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKL----SDVV 184 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhchHhc----CCcc
Confidence 888888887654 7899999999999999986 6553
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-17 Score=137.55 Aligned_cols=103 Identities=20% Similarity=0.183 Sum_probs=88.5
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhhCCCCCCc-eEEc----CC----CC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPD-RLYG----LG----TG 189 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK---------------~~~~a~~iL~~~~gl~~~f~-~v~G----~~----~~ 189 (263)
..++||||.++|+ ++|++++|+||| +...+..+|++ +|+. |+ .++| ++ .|
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCCCC
Confidence 4589999999999 789999999998 46788999995 9997 65 4455 23 25
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
|+|+++..+++++++++++++||||+.+|+++|++ +|+++++|++|--+-+..
T Consensus 104 P~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~----aGi~~i~~~~~~~~~~~~ 156 (161)
T TIGR01261 104 PKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAEN----LGIRGIQYDEEELNWDMI 156 (161)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH----CCCeEEEEChhhcCHHHH
Confidence 99999999999999999999999999999999998 999999999986554433
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.3e-16 Score=135.08 Aligned_cols=176 Identities=13% Similarity=0.081 Sum_probs=128.1
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
.+++||+||||+||-..+..+.+.-+.+++. + .+ .+......|.+...+. +.+.. ..+
T Consensus 11 ~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk------~-~~-------~~~~~~~mG~~~~eaa--~~~~~-~~~----- 68 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYTEAWQELLDRYGK------P-YP-------WDVKVKSMGKRTSEAA--RLFVK-KLP----- 68 (222)
T ss_pred eeEEEecCCcEEecHHHHHHHHHHHHHHcCC------C-Ch-------HHHHHHHcCCCHHHHH--HHHHh-hcC-----
Confidence 5799999999999999999999988888842 1 11 2233446776665554 33321 000
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEc
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (263)
..++.+++. ........ .......+.||+..++. .+|++++++|
T Consensus 69 ---dp~s~ee~~----------------------~e~~~~~~--------~~~~~~~~~PGa~kLv~~L~~~gip~alat 115 (222)
T KOG2914|consen 69 ---DPVSREEFN----------------------KEEEEILD--------RLFMNSILMPGAEKLVNHLKNNGIPVALAT 115 (222)
T ss_pred ---CCCCHHHHH----------------------HHHHHHHH--------HhccccccCCcHHHHHHHHHhCCCCeeEEe
Confidence 022232221 11111111 22345789999999999 8999999999
Q ss_pred CCchHHHHHHHHHhhC-CCCCCceEEc-CC--C---CCcHHHHHHHHhhCCCCC-CcEEEEcCChhhHHHhhccCcCCCC
Q 024758 160 SNQSRFVETLLRELAG-VTITPDRLYG-LG--T---GPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 160 nK~~~~a~~iL~~~~g-l~~~f~~v~G-~~--~---~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
|.++.....-+++ ++ +...|..++- .+ . ||+|++++.+.+.+|.+| +.|+.++|++..+++|++ ||+
T Consensus 116 ~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~a----agm 190 (222)
T KOG2914|consen 116 SSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKA----AGM 190 (222)
T ss_pred cCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHh----cCC
Confidence 9999999999986 55 7666655553 32 1 399999999999999998 999999999999999997 999
Q ss_pred cEEEEcC
Q 024758 232 NLYLGNL 238 (263)
Q Consensus 232 ~~v~v~w 238 (263)
.+|+|.-
T Consensus 191 ~vi~v~~ 197 (222)
T KOG2914|consen 191 QVVGVAT 197 (222)
T ss_pred eEEEecC
Confidence 9999987
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-17 Score=149.48 Aligned_cols=118 Identities=7% Similarity=-0.080 Sum_probs=95.6
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-------CCCcHHHHHHHHhhCCCCCCc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-------~~pkp~~l~~~l~~l~~~~~~ 208 (263)
-.|+++.+.++ +.+++++|+||++..+....+.. +|+..+|+.+.+.. .||+|+++..++++++.+|++
T Consensus 120 ~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~ 198 (257)
T TIGR01458 120 FSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEE 198 (257)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhh
Confidence 45899999888 57889999999999988888874 89998898777532 259999999999999999999
Q ss_pred EEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHH-HhhhhHhHHHhhhcc
Q 024758 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHIL-LLYLYAVALFAKMDV 261 (263)
Q Consensus 209 ~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l-~~~~~~~~~~~~~~~ 261 (263)
++||||+. +||.+|++ +|+++++|+||....++. .....|..+++++.+
T Consensus 199 ~~~vGD~~~~Di~~a~~----~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~e 249 (257)
T TIGR01458 199 AVMIGDDCRDDVGGAQD----CGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPH 249 (257)
T ss_pred EEEECCCcHHHHHHHHH----cCCeEEEECCCCCChHHhcccCCCCCEEECCHHH
Confidence 99999996 99999998 999999999997655443 223445555555443
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.8e-17 Score=134.90 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=90.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~-~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
..+|||+.++|+ ++|++++|+||++ ...++.++++ +|+..++ ...+|+|+++..+++++++++++++|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 479999999999 7899999999999 6888888885 8875432 2347999999999999999999999999
Q ss_pred CCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 214 DRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 214 Ds~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
|+. .|+++|++ +|+.+|+|+||+++.+.+..++
T Consensus 116 Ds~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~~~~ 149 (170)
T TIGR01668 116 DRLFTDVMGGNR----NGSYTILVEPLVHPDQWFIKRI 149 (170)
T ss_pred CcchHHHHHHHH----cCCeEEEEccCcCCccccchhh
Confidence 998 69999998 9999999999999988776554
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=131.84 Aligned_cols=171 Identities=14% Similarity=0.082 Sum_probs=111.6
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHH-HHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAA-RVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~-~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
|+++|||||||+ .+++..+++..+ +++ |++.. ..+.++.++|.|.......+.+
T Consensus 7 k~~iFD~DGTL~--~~d~~~~~~~~~~~~~------g~~~~-------~~~~~~~~ig~~l~~~~~~~~~---------- 61 (211)
T PRK11590 7 RVVFFDLDGTLH--QQDMFGSFLRYLLRRQ------PLNLL-------LVLPLLPVIGLGLLVKGRAARW---------- 61 (211)
T ss_pred eEEEEecCCCCc--ccchHHHHHHHHHHhc------chhhH-------HHhHHHHHhccCcccchhhhhh----------
Confidence 799999999999 677999998888 666 44321 1356778888875432210000
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHH-H---hCCCcEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDAL-K---LASSRIYI 157 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L-~---~~g~~laI 157 (263)
+ ...++ ..+ ..|++++++++..+.|++.|.+. ..+|||+.++| + ++|++++|
T Consensus 62 -----~--~~~~~-------~~~--~~g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~G~~l~I 117 (211)
T PRK11590 62 -----P--MSLLL-------WGC--TFGHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSSDADVWL 117 (211)
T ss_pred -----h--HHHHH-------HHH--HcCCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhCCCEEEE
Confidence 0 00000 000 12556666667777666665431 57799999999 4 57999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC-----C----CC---cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG-----T----GP---KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-----~----~p---kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
||||++..++.+++. +|+.. .+.++|.+ + ++ ..+-+..+-+.++.+...+.+-|||.+|+..-.-
T Consensus 118 vSas~~~~~~~il~~-l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~ 194 (211)
T PRK11590 118 ITGSPQPLVEQVYFD-TPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYF 194 (211)
T ss_pred EeCCcHHHHHHHHHH-ccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHh
Confidence 999999999999995 88633 33455533 1 11 1233344444445566788899999999988764
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-15 Score=139.66 Aligned_cols=101 Identities=14% Similarity=0.122 Sum_probs=82.4
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc----e--------EEcC--CCCCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----R--------LYGL--GTGPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~----~--------v~G~--~~~pkp~~l~~~l~ 200 (263)
.+++||+.++|+ ++|++++|+|+....+++.++++ +|++..+. . +.|. +.+|||+.+.++++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 579999999999 89999999999999999999996 99875332 1 1121 12499999999999
Q ss_pred hCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 201 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
++|+++++|++|||+.+|+.++++ ||+.+ .| +....+.+
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~----AGlgi---A~--nAkp~Vk~ 297 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKA----AGLGI---AY--HAKPKVNE 297 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHH----CCCeE---Ee--CCCHHHHh
Confidence 999999999999999999999987 89744 44 55565554
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.6e-16 Score=144.01 Aligned_cols=98 Identities=18% Similarity=0.051 Sum_probs=90.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCceEEcCC----------C-CCcHHHHHHHHhhC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLG----------T-GPKVNVLKQLQKKP 202 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~-~f~~v~G~~----------~-~pkp~~l~~~l~~l 202 (263)
..+|||+.++|+ ++|++++|+|||+...++.+++. +|+.. +|+.++|.+ . +|+|+++.++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 479999999999 78999999999999999999995 99986 999999975 2 49999999999999
Q ss_pred CC-CCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCC
Q 024758 203 EH-QGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 203 ~~-~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
+. ++++|+||||+.+|+++|++ +||++++|+||-
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a~~----~Gi~~i~v~~g~ 299 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMWRR----IGLECWQVAPGD 299 (300)
T ss_pred hccCceEEEEEcCcHHHHHHHHH----hCCeEEEecCCC
Confidence 88 57999999999999999998 999999999993
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.3e-16 Score=128.43 Aligned_cols=96 Identities=26% Similarity=0.214 Sum_probs=80.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCC--CceEEc-CC----CCCcHH
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTIT--PDRLYG-LG----TGPKVN 193 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~--f~~v~G-~~----~~pkp~ 193 (263)
++|||+.++|+ ++|++++|+||+++ ..+..+|++ +|+... |..+.+ ++ .||+|+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 68999999999 89999999999984 577888995 998632 111222 22 359999
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 194 ~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
++..+++++++++++|+||||+..|+++|++ +|+++|++.-|
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~----~Gi~~v~i~~~ 147 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRLRDLQAARN----AGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHH----CCCCEEEecCC
Confidence 9999999999999999999999999999997 99999998655
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.6e-15 Score=128.34 Aligned_cols=88 Identities=11% Similarity=0.038 Sum_probs=67.4
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc--eEE-------cCC--CCCcHHHHHHHHhhCCC
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-------GLG--TGPKVNVLKQLQKKPEH 204 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~--~v~-------G~~--~~pkp~~l~~~l~~l~~ 204 (263)
.++|||+.++|+ +++.+++|+|++.+.++++++++ +|++.+|. ..+ |.. .++++..+.+.+++.+.
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~ 145 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 145 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCC
Confidence 479999999999 44569999999999999999996 99998875 222 221 22444444444566553
Q ss_pred CCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 205 QGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 205 ~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+++||||+.+|+.+++. ||+++
T Consensus 146 ---~~v~vGDs~nDl~ml~~----Ag~~i 167 (203)
T TIGR02137 146 ---RVIAAGDSYNDTTMLSE----AHAGI 167 (203)
T ss_pred ---CEEEEeCCHHHHHHHHh----CCCCE
Confidence 79999999999999987 78765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=124.34 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=88.7
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCce-EE
Q 024758 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR-LY 184 (263)
Q Consensus 109 ~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~-v~ 184 (263)
|++.+++.+..+.+.+.+. ...+|||+.++|+ ++|++++|+|++++..++.++++ +|++.+|.. +.
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~ 135 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLE 135 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceE
Confidence 7777777666655544321 2378999999998 78999999999999999999995 999877654 22
Q ss_pred c-CC-------C------CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 185 G-LG-------T------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 185 G-~~-------~------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
. .+ . .+|++.+.+++++.+.+++++++||||.+|+.+++. +|.+++
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~----a~~~~~ 195 (202)
T TIGR01490 136 ESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSL----VGHPYV 195 (202)
T ss_pred EcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHh----CCCcEE
Confidence 1 11 1 157788999999999999999999999999999987 787663
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.8e-15 Score=129.26 Aligned_cols=89 Identities=11% Similarity=0.078 Sum_probs=70.1
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC---ceEEcCC----CCCcHHHH----------HH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DRLYGLG----TGPKVNVL----------KQ 197 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f---~~v~G~~----~~pkp~~l----------~~ 197 (263)
..++||+.++|+ ++|++++|+|++....++.+|++ ++...++ +.+++++ .+|+|+.. ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 589999999999 78999999999999999999995 7554333 2334333 12666654 36
Q ss_pred HHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 198 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 198 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
++++++..+++++||||+.+|+.+|++ ||+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~----Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQ----SDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHh----CCe
Confidence 677777788899999999999999987 787
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.3e-15 Score=124.65 Aligned_cols=89 Identities=24% Similarity=0.270 Sum_probs=76.2
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchH------------HHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHH
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSR------------FVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQ 199 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~------------~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l 199 (263)
.+||||.++|+ ++|++++|+|||+.. .++.+|++ +|+.. +.+++.+ .+|+|+++..++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHH
Confidence 48999999999 899999999999974 57889995 99954 4555433 359999999999
Q ss_pred hhCC--CCCCcEEEEcCCh--------hhHHHhhccCcCCCCcEE
Q 024758 200 KKPE--HQGLRLHFVEDRL--------ATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 200 ~~l~--~~~~~~l~VGDs~--------~Di~aA~~~~~~Agi~~v 234 (263)
+++| +++++++||||+. .|+++|++ ||++++
T Consensus 119 ~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~----aGi~~~ 159 (166)
T TIGR01664 119 SQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKN----LGLEFK 159 (166)
T ss_pred HHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHH----CCCCcC
Confidence 9999 9999999999996 69999998 999885
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.6e-16 Score=139.84 Aligned_cols=118 Identities=14% Similarity=0.031 Sum_probs=94.0
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHH-HHHHHhhCCCCCCceEE---cCC----CCCcHHHHHHHHhhCCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~-~iL~~~~gl~~~f~~v~---G~~----~~pkp~~l~~~l~~l~~~~~ 207 (263)
--|||+.++|+ ++|. ++|+|||+..... ..+. ..|+..+|+.+. |.+ .||+|+++..+++++|++|+
T Consensus 143 ~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~-~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~ 220 (279)
T TIGR01452 143 FSYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSR-TPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPA 220 (279)
T ss_pred CCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCc-ccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChh
Confidence 35999999999 4676 8999999985542 2334 256766776664 333 25999999999999999999
Q ss_pred cEEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-------hhHhHHHhhhccc
Q 024758 208 RLHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-------LYAVALFAKMDVL 262 (263)
Q Consensus 208 ~~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-------~~~~~~~~~~~~~ 262 (263)
+++||||+ .+||++|++ +|+++++|+||+++.+++.+. ..|..+++++.+|
T Consensus 221 ~~lmIGD~~~tDI~~A~~----aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 221 RTLMVGDRLETDILFGHR----CGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hEEEECCChHHHHHHHHH----cCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999999 499999997 999999999999999998754 3577777766553
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-14 Score=128.23 Aligned_cols=210 Identities=15% Similarity=0.148 Sum_probs=132.5
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
|+|.||++|||..+.+........+.+++ |++-. + +++...+......+. . .+|.-+-.
T Consensus 8 ravtfD~~~tLl~~~~~~~~~y~~i~~~~------gl~~~-~-------~~~~~~~~~~~~~~~------~-~~p~~~~~ 66 (237)
T KOG3085|consen 8 RAVTFDAGGTLLATLPPVMEVYCEIAEAY------GLEYD-D-------SLIETIFRKDFKKMS------E-KGPFFGLY 66 (237)
T ss_pred EEEEEeCCCceeecCCccHHHHHHHHHHh------CCCCC-H-------HHHhHhhhHHHHhhc------c-cCCccccc
Confidence 89999999999999999998888888888 44410 0 222222222221110 0 01100000
Q ss_pred ccccC-cchHHHHHhhhhhhhhHHhhhcC-CHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 83 SVAEG-LTVEGILENWLKIKPVIMEEWSE-NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 83 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.+ ++..+. |..+. ...++- ..+..++....+...+...+. ....+..+|+.++|+ ++|..++|
T Consensus 67 ---~g~l~~~~w---w~~lv---~~~f~~~~~~~~~~~~~~~~~~~~s~~~---~~~~~~~~~~~~~lq~lR~~g~~l~i 134 (237)
T KOG3085|consen 67 ---SGELTLSQW---WPKLV---ESTFGKAGIDYEEELLENFSFRLFSTFA---PSAWKYLDGMQELLQKLRKKGTILGI 134 (237)
T ss_pred ---CCcccHHHH---HHHHH---HHHhccccchhHHHHHhhhhhheecccc---ccCceeccHHHHHHHHHHhCCeEEEE
Confidence 01 112111 11111 111111 112222333223333222221 123467889999998 89999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCc
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWN 232 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~ 232 (263)
+||-+.+.= .++.. +|+..|||.|+-+. .||+|+++..+++.+++.|++|++|||+. +|+++|++ +|++
T Consensus 135 isN~d~r~~-~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~----~G~~ 208 (237)
T KOG3085|consen 135 ISNFDDRLR-LLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARN----LGWH 208 (237)
T ss_pred ecCCcHHHH-HHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHH----cCCE
Confidence 999987765 78885 99999999999764 35999999999999999999999999997 56999997 9999
Q ss_pred EEEEcCCCCChHHHHhhhh
Q 024758 233 LYLGNLFRFLCHILLLYLY 251 (263)
Q Consensus 233 ~v~v~wGy~~~~~l~~~~~ 251 (263)
++.|.-.-....++....+
T Consensus 209 ailv~~~~~~~~~~~~~~~ 227 (237)
T KOG3085|consen 209 AILVDNSITALKELEYKLG 227 (237)
T ss_pred EEEEccccchhhhhhhccc
Confidence 9999855444444444443
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3e-14 Score=132.65 Aligned_cols=107 Identities=14% Similarity=0.118 Sum_probs=87.2
Q ss_pred cccCCCCcccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhhCCCCCCceE-EcC----C---
Q 024758 134 WIGANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YGL----G--- 187 (263)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~~laI~TnK---------------~~~~a~~iL~~~~gl~~~f~~v-~G~----~--- 187 (263)
+....++||||.++|+ ++|++++|+||| +...+..+++. +|+. |+.+ ++. +
T Consensus 25 ~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~ 101 (354)
T PRK05446 25 SLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCS 101 (354)
T ss_pred CcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCC
Confidence 3455799999999999 789999999997 46678889995 8884 6655 442 2
Q ss_pred -CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 188 -TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 188 -~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
.+|+|+++..+++++++++++++||||+.+|+++|++ +||++|+|.-..-+-++..
T Consensus 102 ~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~----aGi~~I~v~~~~~~~~~i~ 158 (354)
T PRK05446 102 CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAEN----MGIKGIRYARETLNWDAIA 158 (354)
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----CCCeEEEEECCCCCHHHHH
Confidence 3599999999999999999999999999999999997 9999999954333333443
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.56 E-value=5e-15 Score=118.98 Aligned_cols=85 Identities=19% Similarity=0.070 Sum_probs=78.9
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhhC-------CCCCCceEEcCCCCCcHHHHHHHHhhCC--CC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVLKQLQKKPE--HQ 205 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK-~~~~a~~iL~~~~g-------l~~~f~~v~G~~~~pkp~~l~~~l~~l~--~~ 205 (263)
++|||+.++|+ ++|++++|+||+ +...+..+++. ++ +..+|+.+++++.+|||+++..+++++| ++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 68999999999 789999999999 99999999995 88 8899999999877799999999999999 99
Q ss_pred CCcEEEEcCChhhHHHhhc
Q 024758 206 GLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 206 ~~~~l~VGDs~~Di~aA~~ 224 (263)
|++|+||||+..|+++.++
T Consensus 108 p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 108 PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cceEEEECCCHhHHHHHHh
Confidence 9999999999999987653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.7e-14 Score=118.36 Aligned_cols=83 Identities=17% Similarity=0.279 Sum_probs=73.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC--CCcHHHHHHHHhhCCCCCCcEEEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~--~pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
.+++||+.++|+ ++|++++|+|+-....+..+.+. +||. +.++-++. +|.|.++.+++++++.++++++||
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~---~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIF---DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSC---SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccc-cccc---cccccccccccccchhHHHHHHHHhcCCCEEEEE
Confidence 478999999999 88999999999999999999996 9993 44444444 688899999999999999999999
Q ss_pred cCChhhHHHhhc
Q 024758 213 EDRLATLKNVIK 224 (263)
Q Consensus 213 GDs~~Di~aA~~ 224 (263)
||+.+|+.++++
T Consensus 202 GDg~nD~~al~~ 213 (215)
T PF00702_consen 202 GDGVNDAPALKA 213 (215)
T ss_dssp ESSGGHHHHHHH
T ss_pred ccCHHHHHHHHh
Confidence 999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.1e-15 Score=120.83 Aligned_cols=91 Identities=11% Similarity=-0.018 Sum_probs=79.9
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCceEEcCCCC--CcHHHHHHHHhhCCCCCCcEEE
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~-~f~~v~G~~~~--pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
.+.++||+.|+|+ +++++++|+||+++..++.+|++ +|+.. +|+.|++.+.. .||. +.++++++|.+|++|+|
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEE
Confidence 3579999999999 77899999999999999999995 99964 56999987632 5666 88899999999999999
Q ss_pred EcCChhhHHHhhccCcCCCCcE
Q 024758 212 VEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
|||+..|+++|++ |||.+
T Consensus 121 i~Ds~~~~~aa~~----ngI~i 138 (148)
T smart00577 121 IDDSPDSWPFHPE----NLIPI 138 (148)
T ss_pred EECCHHHhhcCcc----CEEEe
Confidence 9999999999986 78765
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.3e-14 Score=117.75 Aligned_cols=86 Identities=21% Similarity=0.214 Sum_probs=72.4
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC--------------CC-C-CcHHHHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL--------------GT-G-PKVNVLKQL 198 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~--------------~~-~-pkp~~l~~~ 198 (263)
.+++||+.++|+ ++|++++|+|+....+++.++++ +|+..+|...+.. .. + .|++.+.++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 468999999999 89999999999999999999995 9998766433221 11 1 578899999
Q ss_pred HhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 199 QKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 199 l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
++++++++++++|||||.+|+.+++.
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~ 176 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKL 176 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhc
Confidence 99999999999999999999999874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-14 Score=128.97 Aligned_cols=69 Identities=10% Similarity=-0.007 Sum_probs=59.9
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHh-hhhHhHHHhhhcc
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLL-YLYAVALFAKMDV 261 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~-~~~~~~~~~~~~~ 261 (263)
||+|+++..+++++++++++++||||+. +||++|++ +|+++++|.||+++.+++.+ ...+..+++++.+
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~----~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~e 244 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ----AGLETILVLSGVSTLDDIDSMPFRPSWIYPSVAD 244 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHH----cCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHH
Confidence 5999999999999999999999999996 89999998 99999999999999888864 3456666665544
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.4e-14 Score=126.36 Aligned_cols=118 Identities=11% Similarity=0.089 Sum_probs=82.9
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHH--HH-HHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVET--LL-RELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~--iL-~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~ 208 (263)
...|+.+...+. ++|.+ .|+||.+...-.. ++ .. -.+...++.+.|.+ .||+|+++..+++.+++++++
T Consensus 120 ~~~y~~l~~a~~~l~~g~~-~i~tN~D~~~~~~~~~~~~~-G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~ 197 (249)
T TIGR01457 120 QIDYEKFATATLAIRKGAH-FIGTNGDLAIPTERGLLPGN-GSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREE 197 (249)
T ss_pred CCCHHHHHHHHHHHHCCCe-EEEECCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCccc
Confidence 346777777776 67776 8999976543211 00 10 01111233344443 259999999999999999999
Q ss_pred EEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhcc
Q 024758 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDV 261 (263)
Q Consensus 209 ~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~ 261 (263)
++||||+. +||.+|++ +|+++++|.||++..+++... ..+..+++++.+
T Consensus 198 ~~~VGD~~~~Di~~a~~----~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~ 248 (249)
T TIGR01457 198 TLMVGDNYLTDIRAGID----AGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAE 248 (249)
T ss_pred EEEECCCchhhHHHHHH----cCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhh
Confidence 99999996 89999998 999999999999988877542 445555555443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.5e-13 Score=119.24 Aligned_cols=102 Identities=11% Similarity=0.033 Sum_probs=71.8
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCc-----hHHHHHHHHHhhCCCC---CCceEEcCCCC-CcHHHHHHHHhhCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQ-----SRFVETLLRELAGVTI---TPDRLYGLGTG-PKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~-----~~~a~~iL~~~~gl~~---~f~~v~G~~~~-pkp~~l~~~l~~l~~~~ 206 (263)
..|+++.++++ ..+..+.|+|+++ +...+.+++. +++.. .+..+-....+ .|+..+..+++.+|+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~ 215 (272)
T PRK10530 137 PTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSM 215 (272)
T ss_pred cceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCH
Confidence 34778887776 4567778888765 3455566663 66541 11111111112 69999999999999999
Q ss_pred CcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 207 ~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+++++|||+.+|+.+++. ||+ +|.||.. .+++.+.
T Consensus 216 ~e~i~~GD~~NDi~m~~~----ag~---~vamgna-~~~lk~~ 250 (272)
T PRK10530 216 KNVVAFGDNFNDISMLEA----AGL---GVAMGNA-DDAVKAR 250 (272)
T ss_pred HHeEEeCCChhhHHHHHh----cCc---eEEecCc-hHHHHHh
Confidence 999999999999999987 885 7888854 5666543
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.3e-12 Score=110.59 Aligned_cols=102 Identities=16% Similarity=0.134 Sum_probs=82.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC------------C--CCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------------T--GPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~------------~--~pkp~~l~~~l~ 200 (263)
.+++||..++++ ++|.+++|+|+-+..+++++.++ +|++..+....-.+ . ..|-+.+.++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 589999999999 89999999999999999999996 99986654443211 1 147789999999
Q ss_pred hCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 201 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
++|.++++++++|||.+|+-.=+. +|.+. -++...++...
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~----ag~~i-----a~n~~~~l~~~ 194 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEA----AGLPI-----AVNPKPKLRAL 194 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHh----CCCCe-----EeCcCHHHHHH
Confidence 999999999999999999988765 66543 45666665543
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.39 E-value=7e-13 Score=109.73 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=76.0
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 144 v~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
+.+.|+++|++++|+||++...++.++++ +|+..+|+. .+|||+++.++++++|+++++|+||||+.+|+.+++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~ 109 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVME 109 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 45555588999999999999999999995 999877652 268999999999999999999999999999999999
Q ss_pred ccCcCCCCcEEEEcCCC
Q 024758 224 KEPELDGWNLYLGNLFR 240 (263)
Q Consensus 224 ~~~~~Agi~~v~v~wGy 240 (263)
+ +|+. ++|.++.
T Consensus 110 ~----ag~~-~~v~~~~ 121 (154)
T TIGR01670 110 K----VGLS-VAVADAH 121 (154)
T ss_pred H----CCCe-EecCCcC
Confidence 7 8996 7887775
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-12 Score=110.57 Aligned_cols=77 Identities=19% Similarity=0.234 Sum_probs=69.5
Q ss_pred HHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC
Q 024758 147 ALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (263)
Q Consensus 147 ~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 226 (263)
.|+++|++++|+|||++..++.++++ +|+..+|+.+ +|||+.+..+++++++++++++||||+.+|+.+++.
T Consensus 45 ~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~-- 116 (169)
T TIGR02726 45 VLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKR-- 116 (169)
T ss_pred HHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHH--
Confidence 34478999999999999999999995 9999888743 699999999999999999999999999999999997
Q ss_pred cCCCCcE
Q 024758 227 ELDGWNL 233 (263)
Q Consensus 227 ~~Agi~~ 233 (263)
+|+.+
T Consensus 117 --ag~~~ 121 (169)
T TIGR02726 117 --VGLAV 121 (169)
T ss_pred --CCCeE
Confidence 78754
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.2e-12 Score=99.21 Aligned_cols=95 Identities=24% Similarity=0.195 Sum_probs=85.7
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----C----------------CCcHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----T----------------GPKVN 193 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~----------------~pkp~ 193 (263)
..+++||+.++|+ ++|++++|+||.....++..+++ +|+..+|+.+++.. . +|+++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 4689999999999 77999999999999999999996 99988889888753 1 68899
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 194 ~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
.+..+++.++.++++++||||+.+|++++++ +|+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~----~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKA----AGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHH----cCCceeeC
Confidence 9999999999999999999999999999987 79998875
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.3e-12 Score=118.58 Aligned_cols=86 Identities=17% Similarity=0.116 Sum_probs=79.5
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHh----hCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLREL----AGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~----~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
...+|||+.++|+ ++|++++|||||++..+..+|+ + +|+..+|+.+.+. .+|||+.+.++++++|++++++
T Consensus 29 ~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~-~~~~~~~~~~~f~~~~~~-~~pk~~~i~~~~~~l~i~~~~~ 106 (320)
T TIGR01686 29 LSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE-RRKDFILQAEDFDARSIN-WGPKSESLRKIAKKLNLGTDSF 106 (320)
T ss_pred cCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-hCccccCcHHHeeEEEEe-cCchHHHHHHHHHHhCCCcCcE
Confidence 3468999999999 8999999999999999999999 6 7888899998776 3699999999999999999999
Q ss_pred EEEcCChhhHHHhhc
Q 024758 210 HFVEDRLATLKNVIK 224 (263)
Q Consensus 210 l~VGDs~~Di~aA~~ 224 (263)
+||||+..|+.++++
T Consensus 107 vfidD~~~d~~~~~~ 121 (320)
T TIGR01686 107 LFIDDNPAERANVKI 121 (320)
T ss_pred EEECCCHHHHHHHHH
Confidence 999999999999986
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.6e-13 Score=125.80 Aligned_cols=105 Identities=16% Similarity=0.093 Sum_probs=84.6
Q ss_pred CCcEEEEcCCchHH-HHHHHHHhhCCCCCCceEEcCC---C----CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHh
Q 024758 152 SSRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLG---T----GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNV 222 (263)
Q Consensus 152 g~~laI~TnK~~~~-a~~iL~~~~gl~~~f~~v~G~~---~----~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA 222 (263)
+-.++|+|||+... ....+. +.|+..+|+.+.+.. . ||+|.++..+++++++++++++||||+. +||.+|
T Consensus 186 ~g~~~i~tn~d~~~~~~~~~~-~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A 264 (311)
T PLN02645 186 PGCLFIATNRDAVTHLTDAQE-WAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG 264 (311)
T ss_pred CCCEEEEeCCCCCCCCCCCCC-ccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH
Confidence 45699999999865 344455 378888888888643 1 5999999999999999999999999997 999999
Q ss_pred hccCcCCCCcEEEEcCCCCChHHHHhh---hhHhHHHhhhcc
Q 024758 223 IKEPELDGWNLYLGNLFRFLCHILLLY---LYAVALFAKMDV 261 (263)
Q Consensus 223 ~~~~~~Agi~~v~v~wGy~~~~~l~~~---~~~~~~~~~~~~ 261 (263)
++ +|+++++|+||+++.+++.+. ..|..+++++.+
T Consensus 265 ~~----aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~ 302 (311)
T PLN02645 265 QN----GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISD 302 (311)
T ss_pred HH----cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHH
Confidence 98 999999999999998887642 456555555543
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-11 Score=118.36 Aligned_cols=87 Identities=14% Similarity=0.149 Sum_probs=70.4
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC----C--CcHHHHHHHHhhCCCCCCcE
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----G--PKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----~--pkp~~l~~~l~~l~~~~~~~ 209 (263)
+++||+.+.|+ ++|++++|+||+++..+++++++ +|+ ||.++|.+. + +|++.+. +.++ .+++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~---~~l~--~~~~ 142 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALV---EAFG--ERGF 142 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHH---HHhC--ccCe
Confidence 57899999999 89999999999999999999994 988 899998762 2 3444443 4443 3568
Q ss_pred EEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 210 HFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 210 l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
+|+|||.+|+.+++. +| ..+.|.=+
T Consensus 143 ~yvGDS~~Dlp~~~~----A~-~av~Vn~~ 167 (479)
T PRK08238 143 DYAGNSAADLPVWAA----AR-RAIVVGAS 167 (479)
T ss_pred eEecCCHHHHHHHHh----CC-CeEEECCC
Confidence 999999999999987 77 67777544
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.1e-10 Score=99.76 Aligned_cols=106 Identities=14% Similarity=0.127 Sum_probs=74.2
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH----hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEE
Q 024758 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 184 (263)
Q Consensus 109 ~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~----~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~ 184 (263)
|++++++++..+.|++.|.. .+.+|||+.++|+ ++|++++|||||++..++++.+. .++..-. .++
T Consensus 72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~~-~~i 141 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHRL-NLI 141 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-ccccccC-cEE
Confidence 67788777777777776643 2478999999994 47999999999999999999984 6663322 344
Q ss_pred cCC----C-----CC---cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 185 GLG----T-----GP---KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 185 G~~----~-----~p---kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
|.+ . ++ -++-+..+-+.++.+...+.+-|||.+|+..-.-
T Consensus 142 ~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~ 193 (210)
T TIGR01545 142 ASQIERGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAF 193 (210)
T ss_pred EEEeEEeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHh
Confidence 432 1 11 1233333333445455678899999999988754
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-11 Score=104.74 Aligned_cols=79 Identities=20% Similarity=0.244 Sum_probs=70.0
Q ss_pred HHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCc
Q 024758 148 LKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (263)
Q Consensus 148 L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 227 (263)
|+++|++++|+||++...++.++++ +|+..+|+ |. .+||+.+.++++++|+++++++||||+.+|+.++++
T Consensus 60 L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g~--~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~--- 130 (183)
T PRK09484 60 LLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---GQ--SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK--- 130 (183)
T ss_pred HHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---CC--CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH---
Confidence 3478999999999999999999996 99988775 32 378999999999999999999999999999999997
Q ss_pred CCCCcEEEEc
Q 024758 228 LDGWNLYLGN 237 (263)
Q Consensus 228 ~Agi~~v~v~ 237 (263)
+|+.+ +|.
T Consensus 131 -aG~~~-~v~ 138 (183)
T PRK09484 131 -VGLSV-AVA 138 (183)
T ss_pred -CCCeE-ecC
Confidence 89984 463
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.1e-12 Score=94.11 Aligned_cols=69 Identities=14% Similarity=0.004 Sum_probs=60.6
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh-hhhHhHHHhhhcc
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRFLCHILLL-YLYAVALFAKMDV 261 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~-~~~~~~~~~~~~~ 261 (263)
||+|.++..+++++++++++++||||+ ..||++|++ +|+++|+|++|+.+.+++.. ...|.-+++++.+
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~----~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKA----AGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHH----TTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHH----cCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 699999999999999999999999999 999999998 99999999999999887763 3566666666554
|
... |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.5e-10 Score=98.50 Aligned_cols=96 Identities=15% Similarity=0.160 Sum_probs=81.5
Q ss_pred CCCcccHHHHHH-hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC--C--------CCcHHHHHHHHhhCCCC-
Q 024758 138 NRLYPGVSDALK-LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--T--------GPKVNVLKQLQKKPEHQ- 205 (263)
Q Consensus 138 ~~lypGv~e~L~-~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~--~--------~pkp~~l~~~l~~l~~~- 205 (263)
.+|=|-.+++|- -+..+..|.||.++.-|.++|++ +||.+.|+.|++-+ . ||.++.+..+++..|+.
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 455566678877 22223899999999999999996 99999999999743 1 38899999999999998
Q ss_pred CCcEEEEcCChhhHHHhhccCcCCCCcEEEEcC
Q 024758 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 206 ~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~w 238 (263)
|.+++|+.||.+.|++|++ -|+.++.|+=
T Consensus 178 p~~t~FfDDS~~NI~~ak~----vGl~tvlv~~ 206 (244)
T KOG3109|consen 178 PRNTYFFDDSERNIQTAKE----VGLKTVLVGR 206 (244)
T ss_pred cCceEEEcCchhhHHHHHh----ccceeEEEEe
Confidence 9999999999999999998 7999988853
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.23 E-value=4e-12 Score=112.36 Aligned_cols=92 Identities=11% Similarity=0.051 Sum_probs=79.5
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE--EcCC----CCCcHHHHHHHHhhCCCC-CCcE
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL--YGLG----TGPKVNVLKQLQKKPEHQ-GLRL 209 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v--~G~~----~~pkp~~l~~~l~~l~~~-~~~~ 209 (263)
-|||+.++|+ ++|+++ |+|||+.......+.. +|...+|..+ +|.+ .||+|+++..++++++.. ++++
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 216 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRM 216 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3899999998 679997 9999999999888884 8888888766 5654 249999999999999875 6799
Q ss_pred EEEcCC-hhhHHHhhccCcCCCCcEEEEc
Q 024758 210 HFVEDR-LATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 210 l~VGDs-~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
+||||+ .+||.+|++ +|+++++|+
T Consensus 217 ~~vGD~~~~Di~~a~~----~G~~~i~v~ 241 (242)
T TIGR01459 217 LMVGDSFYTDILGANR----LGIDTALVL 241 (242)
T ss_pred EEECCCcHHHHHHHHH----CCCeEEEEe
Confidence 999999 699999997 999999986
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.1e-10 Score=100.19 Aligned_cols=107 Identities=17% Similarity=0.240 Sum_probs=84.5
Q ss_pred CCCCcccHHHHHH-----hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-----CC-----------------
Q 024758 137 ANRLYPGVSDALK-----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG----------------- 189 (263)
Q Consensus 137 ~~~lypGv~e~L~-----~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-----~~----------------- 189 (263)
..++-||+.++++ +.|+.+.|+|....-+++.+|++ .|+...|+.|++.. .+
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 4588999999999 36999999999999999999995 99999999998742 11
Q ss_pred --CcHHHHHHHHhhC---CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 190 --PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 190 --pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
-|..++.+.++.. |.+-.+++||||+.+|.-.+.+ ...-+++.+.=||.-.+.+.
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~---L~~~D~v~~R~~~~l~~~i~ 207 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR---LRPRDVVFPRKGYPLHKLIQ 207 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc---cCCCCEEecCCCChHHHHHh
Confidence 2456777777663 6677899999999999988875 34566788888876554444
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.5e-10 Score=105.86 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=81.4
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh-C-------CCCCCceEEcCCCCC---------------
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA-G-------VTITPDRLYGLGTGP--------------- 190 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~-g-------l~~~f~~v~G~~~~p--------------- 190 (263)
.+.++||+.++|+ ++|++++|+|||+...++.+|+. + | |..|||.|+++..||
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 3677999999999 89999999999999999999995 5 7 899999999875332
Q ss_pred ----cH--------------HHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcC
Q 024758 191 ----KV--------------NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 191 ----kp--------------~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~w 238 (263)
++ -.+..+.+.++.++++++||||+. .||.++++ .+|+++++|.-
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk---~~Gw~TvlI~p 324 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKK---KRGWRTAAIIP 324 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHH---hcCcEEEEEch
Confidence 11 124566777899999999999986 79999983 28999999965
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.3e-10 Score=113.36 Aligned_cols=82 Identities=21% Similarity=0.325 Sum_probs=72.7
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCch------------HHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHh
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQK 200 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~------------~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~ 200 (263)
+||||.+.|+ ++|++++|+||++. ..+..+|++ +|+. |+.++|.+ .||+|.++..+++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 6999999999 89999999999998 468899995 8884 88888864 3599999999999
Q ss_pred hCC----CCCCcEEEEcCChhhHHHhhc
Q 024758 201 KPE----HQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 201 ~l~----~~~~~~l~VGDs~~Di~aA~~ 224 (263)
+++ +++++++||||+..|+++|++
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ 302 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKA 302 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHh
Confidence 985 889999999999999998775
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.6e-10 Score=93.21 Aligned_cols=88 Identities=18% Similarity=0.201 Sum_probs=76.9
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 216 (263)
.=|.+.+.+. ++|+++.|+||+.+..+...+++ +|+. +|.++ .||-+..+.+++++++.++++|+||||..
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~----fi~~A-~KP~~~~fr~Al~~m~l~~~~vvmVGDqL 120 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVP----FIYRA-KKPFGRAFRRALKEMNLPPEEVVMVGDQL 120 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCc----eeecc-cCccHHHHHHHHHHcCCChhHEEEEcchh
Confidence 4477777777 89999999999999999999996 8884 45543 36899999999999999999999999997
Q ss_pred -hhHHHhhccCcCCCCcEEEEc
Q 024758 217 -ATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 217 -~Di~aA~~~~~~Agi~~v~v~ 237 (263)
+|+.+|++ +|++||.|.
T Consensus 121 ~TDVlggnr----~G~~tIlV~ 138 (175)
T COG2179 121 FTDVLGGNR----AGMRTILVE 138 (175)
T ss_pred hhhhhcccc----cCcEEEEEE
Confidence 79999998 999999984
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.1e-09 Score=98.60 Aligned_cols=82 Identities=17% Similarity=0.200 Sum_probs=66.2
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhhCCCC-CCceEEcCCC-CCcHHHHHHHHhhCCCCCCc
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTI-TPDRLYGLGT-GPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~---~~a~~iL~~~~gl~~-~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~ 208 (263)
...++||+.++|+ ++|++++|+||+++ ..+...|++ +|+.. .++.|+..+. .+|+.....+.+..++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 4679999999999 89999999999884 445688885 99975 4577777543 4888888888877776
Q ss_pred EEEEcCChhhHHHhh
Q 024758 209 LHFVEDRLATLKNVI 223 (263)
Q Consensus 209 ~l~VGDs~~Di~aA~ 223 (263)
++||||+..|+....
T Consensus 191 vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 191 VLLFGDNLLDFDDFF 205 (266)
T ss_pred EEEECCCHHHhhhhh
Confidence 799999999997643
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.5e-10 Score=113.60 Aligned_cols=96 Identities=14% Similarity=0.178 Sum_probs=76.8
Q ss_pred ccCCCCcccHHHHHH---hCCC-cEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEE
Q 024758 135 IGANRLYPGVSDALK---LASS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~-~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
....++|||+.++|+ ++|+ +++|+||+++..++.++++ +|++.+|..+. ..+|++.+.++ +...++++
T Consensus 358 ~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l----~~~~~~v~ 429 (536)
T TIGR01512 358 LLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKEL----REKYGPVA 429 (536)
T ss_pred EEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHH----HhcCCEEE
Confidence 344689999999999 8999 9999999999999999996 99988875432 12455555544 44557999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHH
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHI 245 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~ 245 (263)
||||+.+|+.++++ || ++++|||+..+.
T Consensus 430 ~vGDg~nD~~al~~----A~---vgia~g~~~~~~ 457 (536)
T TIGR01512 430 MVGDGINDAPALAA----AD---VGIAMGASGSDV 457 (536)
T ss_pred EEeCCHHHHHHHHh----CC---EEEEeCCCccHH
Confidence 99999999999997 88 599999754333
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.06 E-value=4e-10 Score=111.06 Aligned_cols=92 Identities=17% Similarity=0.191 Sum_probs=75.4
Q ss_pred cCCCCcccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 136 GANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g-~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
...++|||+.++|+ ++| ++++|+||+++..++.++++ +|++.+|..+.. .+|++.+.++. ..+.+++|
T Consensus 381 ~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~~p---~~K~~~v~~l~----~~~~~v~~ 452 (556)
T TIGR01525 381 LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAELLP---EDKLAIVKELQ----EEGGVVAM 452 (556)
T ss_pred ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccCCH---HHHHHHHHHHH----HcCCEEEE
Confidence 34689999999999 789 99999999999999999995 999887765421 24666555544 35679999
Q ss_pred EcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 212 VEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
|||+.+|+.++++ || ++++||.++
T Consensus 453 vGDg~nD~~al~~----A~---vgia~g~~~ 476 (556)
T TIGR01525 453 VGDGINDAPALAA----AD---VGIAMGAGS 476 (556)
T ss_pred EECChhHHHHHhh----CC---EeEEeCCCC
Confidence 9999999999987 88 799999543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.8e-10 Score=99.01 Aligned_cols=83 Identities=13% Similarity=-0.006 Sum_probs=61.2
Q ss_pred hCCCcEEEE---cCCchHHHHHHHHHhhCCC----CCCceEEcCCCCCcHHHHHHHHhhCCCCC-CcEEEEcCChhhHHH
Q 024758 150 LASSRIYIV---TSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKN 221 (263)
Q Consensus 150 ~~g~~laI~---TnK~~~~a~~iL~~~~gl~----~~f~~v~G~~~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~a 221 (263)
..++...++ |++....+...++. +++. .+|..|.... .|...+.++++.+|+++ +++++|||+.+|+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m 222 (273)
T PRK00192 146 DREFSEPFLWNGSEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLPM 222 (273)
T ss_pred hcccCCceeecCchHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHHH
Confidence 344444444 77777777788874 7775 4455565544 67888999999999999 999999999999999
Q ss_pred hhccCcCCCCcEEEEcCCC
Q 024758 222 VIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 222 A~~~~~~Agi~~v~v~wGy 240 (263)
.+. +|+. +++.-+.
T Consensus 223 ~~~----ag~~-vam~NA~ 236 (273)
T PRK00192 223 LEA----ADIA-VVVPGPD 236 (273)
T ss_pred HHh----CCee-EEeCCCC
Confidence 987 7753 3454443
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-08 Score=92.64 Aligned_cols=86 Identities=17% Similarity=0.215 Sum_probs=70.6
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE------EcCC---CC-C--------cHH-H
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------YGLG---TG-P--------KVN-V 194 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v------~G~~---~~-p--------kp~-~ 194 (263)
..++.||+.++|+ ++|++++|+|+.....++.+|++ +|+...+..| +..+ .+ | |.+ +
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 4689999999999 89999999999999999999996 9998777777 4222 11 3 334 4
Q ss_pred HHHHHhhCC--CCCCcEEEEcCChhhHHHhh
Q 024758 195 LKQLQKKPE--HQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 195 l~~~l~~l~--~~~~~~l~VGDs~~Di~aA~ 223 (263)
+..+.+.++ .++++|++|||+.+|+.+|.
T Consensus 198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~ 228 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMAD 228 (277)
T ss_pred HHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence 445777888 88999999999999999985
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.02 E-value=3e-09 Score=89.35 Aligned_cols=78 Identities=19% Similarity=0.339 Sum_probs=60.9
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-------------CCC----cHHHHHHH---
Q 024758 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------------TGP----KVNVLKQL--- 198 (263)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-------------~~p----kp~~l~~~--- 198 (263)
|++.++|+ ++|+++.|+|+.+...++.+++. +|+...+ ++|.+ .++ |...+.++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 44449998 78999999999999999999995 9987421 33221 012 88888888
Q ss_pred HhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 199 QKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 199 l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
... +.+...+++||||.+|+.+.|
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHhC
Confidence 445 788899999999999998764
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=8.2e-10 Score=96.00 Aligned_cols=85 Identities=16% Similarity=0.026 Sum_probs=62.1
Q ss_pred cEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC------CC-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC
Q 024758 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (263)
Q Consensus 154 ~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~------~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 226 (263)
.+.+.++++...+...+++ ++.. +..+.+.. .+ +|+..+..+++.+|++++++++|||+.+|+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~-- 191 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEV-- 191 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh--
Confidence 4566777888888888885 6542 33333322 12 79999999999999999999999999999999987
Q ss_pred cCCCCcEEEEcCCCCChHHHHhh
Q 024758 227 ELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 227 ~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+|+. +++.- ..+++.+.
T Consensus 192 --ag~~-vam~N---a~~~vk~~ 208 (230)
T PRK01158 192 --AGFG-VAVAN---ADEELKEA 208 (230)
T ss_pred --cCce-EEecC---ccHHHHHh
Confidence 7774 35543 34555544
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=2e-09 Score=96.86 Aligned_cols=101 Identities=19% Similarity=0.141 Sum_probs=74.5
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHH------------HHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCC
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRF------------VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE 203 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~------------a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~ 203 (263)
..-|.-..+.+. .+| -..|+||.+... .-..++. .+-... .++| ||.|.++..+++.++
T Consensus 132 ~~~~e~l~~a~~~i~~g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~-~tg~~~--~~~G---KP~~~i~~~al~~~~ 204 (269)
T COG0647 132 TLTYEKLAEALLAIAAG-APFIATNPDLTVPTERGLRPGAGAIAALLEQ-ATGREP--TVIG---KPSPAIYEAALEKLG 204 (269)
T ss_pred CCCHHHHHHHHHHHHcC-CcEEEeCCCccccCCCCCccCcHHHHHHHHH-hhCCcc--cccC---CCCHHHHHHHHHHhC
Confidence 344555566666 666 568999887544 2233332 221111 3444 589999999999999
Q ss_pred CCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 204 HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 204 ~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
..+++++||||+. +||.+|++ +|++++.|..|.++.+++...
T Consensus 205 ~~~~~~~mVGD~~~TDI~~a~~----~G~~t~LV~TGv~~~~~~~~~ 247 (269)
T COG0647 205 LDRSEVLMVGDRLDTDILGAKA----AGLDTLLVLTGVSSAEDLDRA 247 (269)
T ss_pred CCcccEEEEcCCchhhHHHHHH----cCCCEEEEccCCCChhhhhhh
Confidence 9999999999996 79999997 999999999999988886533
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.1e-09 Score=93.10 Aligned_cols=85 Identities=16% Similarity=0.334 Sum_probs=71.6
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHH--HHHHHhhCCCC-CCceEEcCCCCCcHHHHHHHHhhCCCCCCcEE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVE--TLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~--~iL~~~~gl~~-~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..++|||+.++|+ ++|++++|+|||++.... ..|++ +|+.. +|+.|+++.... .+.+..++++++.++++++
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~~-~~~l~~~~~~~~~~~~~~~ 99 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEIA-VQMILESKKRFDIRNGIIY 99 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHHH-HHHHHhhhhhccCCCceEE
Confidence 4679999999998 789999999999998776 78895 99998 999999876321 2567777788888999999
Q ss_pred EEcCChhhHHHhh
Q 024758 211 FVEDRLATLKNVI 223 (263)
Q Consensus 211 ~VGDs~~Di~aA~ 223 (263)
+|||+..|++...
T Consensus 100 ~vGd~~~d~~~~~ 112 (242)
T TIGR01459 100 LLGHLENDIINLM 112 (242)
T ss_pred EeCCcccchhhhc
Confidence 9999999987653
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.2e-08 Score=86.56 Aligned_cols=97 Identities=25% Similarity=0.184 Sum_probs=78.8
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhhCCCCCCceEE-cC--------CCCCc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRLY-GL--------GTGPK 191 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK---------------~~~~a~~iL~~~~gl~~~f~~v~-G~--------~~~pk 191 (263)
.+.||+.+.|. +.|++++|+||. .......+|+. .|. -|+.|+ +. ..||+
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRKP~ 107 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRKPK 107 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccCCC
Confidence 67899999998 899999999994 34445566774 776 345554 32 14599
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 192 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
|-+++.+++++++++++.+||||+..|+++|.+ +|+..+.+.-|.+.
T Consensus 108 ~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n----~gi~~~~~~~~~~~ 154 (181)
T COG0241 108 PGMLLSALKEYNIDLSRSYVVGDRLTDLQAAEN----AGIKGVLVLTGIGV 154 (181)
T ss_pred hHHHHHHHHHhCCCccceEEecCcHHHHHHHHH----CCCCceEEEcCccc
Confidence 999999999999999999999999999999987 89987777766655
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.5e-08 Score=87.87 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=59.4
Q ss_pred CCCcEEE-EcCCchHHHHHHHHHhhCCC----CCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhcc
Q 024758 151 ASSRIYI-VTSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (263)
Q Consensus 151 ~g~~laI-~TnK~~~~a~~iL~~~~gl~----~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 225 (263)
.++.+.+ .|++....+...+++ .|+. .+|..|.+.+. .|+..+..+++.+|++++++++|||+.+|+.+-+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~- 213 (221)
T TIGR02463 137 ASVPLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEV- 213 (221)
T ss_pred CCccEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHh-
Confidence 3455566 667777888888885 7775 44444554332 58888999999999999999999999999999986
Q ss_pred CcCCCCcE
Q 024758 226 PELDGWNL 233 (263)
Q Consensus 226 ~~~Agi~~ 233 (263)
+|..+
T Consensus 214 ---ag~~v 218 (221)
T TIGR02463 214 ---ADYAV 218 (221)
T ss_pred ---CCceE
Confidence 77654
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.5e-09 Score=101.54 Aligned_cols=90 Identities=13% Similarity=0.167 Sum_probs=72.7
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
..+++||+.++|+ ++|++++|+||+++..++.++++ +|++ ++.... .+|++.+.++.+ ++++++||
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~----~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQE----KGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHH----cCCEEEEE
Confidence 3579999999999 78999999999999999999996 9996 333221 256666666543 56899999
Q ss_pred cCChhhHHHhhccCcCCCCcEEEEcCCCCCh
Q 024758 213 EDRLATLKNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 213 GDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
||+.+|+.++++ ||+ ++.||+++.
T Consensus 473 GDg~nD~~al~~----A~v---gia~g~g~~ 496 (562)
T TIGR01511 473 GDGINDAPALAQ----ADV---GIAIGAGTD 496 (562)
T ss_pred eCCCccHHHHhh----CCE---EEEeCCcCH
Confidence 999999999987 884 889997653
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.1e-09 Score=89.75 Aligned_cols=103 Identities=9% Similarity=-0.097 Sum_probs=82.4
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCceEEcCCCC--CcHHHHHHHHhhCCCCCCcEEEE
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~-~f~~v~G~~~~--pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
+..=||+.|+|+ .+.+.++|.|++++..|+.+|++ ++... +|+.+++.+.. .++. +.+.+..+|.+++++|||
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIII 118 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEE
Confidence 456699999999 56699999999999999999995 99875 88999887632 2232 567788889999999999
Q ss_pred cCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 213 EDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 213 GDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
||++.|+.++++ +||.+..-. |=.+..+|.
T Consensus 119 DD~~~~~~~~~~----NgI~i~~f~-~~~~D~~L~ 148 (162)
T TIGR02251 119 DNSPYSYSLQPD----NAIPIKSWF-GDPNDTELL 148 (162)
T ss_pred eCChhhhccCcc----CEeecCCCC-CCCCHHHHH
Confidence 999999998876 898876555 434555554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.3e-09 Score=90.01 Aligned_cols=87 Identities=14% Similarity=0.034 Sum_probs=61.5
Q ss_pred CcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC---C---CC-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhcc
Q 024758 153 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL---G---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (263)
Q Consensus 153 ~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~---~---~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 225 (263)
....+.+....+.+..++++ ++... ....+. + .+ +|+..+..+++.+|++++++++|||+.+|+.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~- 183 (225)
T TIGR01482 108 SLVKMRYGIDVDTVREIIKE-LGLNL--VAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEV- 183 (225)
T ss_pred ceEEEeecCCHHHHHHHHHh-cCceE--EEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHh-
Confidence 34566677677788888885 77641 111111 1 12 89999999999999999999999999999999987
Q ss_pred CcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 226 PELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 226 ~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
+|+. +++ | +..+++.+.+
T Consensus 184 ---ag~~-vam--~-Na~~~~k~~A 201 (225)
T TIGR01482 184 ---PGFG-VAV--A-NAQPELKEWA 201 (225)
T ss_pred ---cCce-EEc--C-ChhHHHHHhc
Confidence 7773 445 3 3355565543
|
catalyze the same reaction as SPP. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.3e-08 Score=103.00 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=76.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
.+++||+.++|+ ++|++++++|++.+..++.++++ +|++.+|..+ .|+.-.+++++++..+++++||||
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~~-------~p~~K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAGV-------LPDGKAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeCC-------CHHHHHHHHHHHhhcCCEEEEEeC
Confidence 478999999999 88999999999999999999996 9997544322 122223455556667889999999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
+.+|+.++++ ||+ ++.||.++...+.
T Consensus 721 g~nD~~al~~----Agv---gia~g~g~~~a~~ 746 (834)
T PRK10671 721 GINDAPALAQ----ADV---GIAMGGGSDVAIE 746 (834)
T ss_pred CHHHHHHHHh----CCe---eEEecCCCHHHHH
Confidence 9999999987 897 8999987666554
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.7e-08 Score=81.01 Aligned_cols=110 Identities=17% Similarity=0.161 Sum_probs=78.0
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEc-CCchHHHHHHHHHhhCCC----------CCCceEEcCCCCCcHHHHHHHHhh
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVT-SNQSRFVETLLRELAGVT----------ITPDRLYGLGTGPKVNVLKQLQKK 201 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~T-nK~~~~a~~iL~~~~gl~----------~~f~~v~G~~~~pkp~~l~~~l~~ 201 (263)
...++||+|.++|+ ++|++++||| +...+.|+.+|+. +++. .+|+.+-=. .++|...+.++.++
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~-~gsK~~Hf~~i~~~ 119 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIY-PGSKTTHFRRIHRK 119 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEES-SS-HHHHHHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhhee-cCchHHHHHHHHHh
Confidence 35689999999999 8999999999 4556799999995 9999 777764321 23788999999999
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhH
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYA 252 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~ 252 (263)
.|++.++++|+.|....++..++ -||.|+.|.-|- +.+++.+++..
T Consensus 120 tgI~y~eMlFFDDe~~N~~~v~~----lGV~~v~v~~Gl-t~~~~~~gL~~ 165 (169)
T PF12689_consen 120 TGIPYEEMLFFDDESRNIEVVSK----LGVTCVLVPDGL-TWDEFERGLEK 165 (169)
T ss_dssp H---GGGEEEEES-HHHHHHHHT----TT-EEEE-SSS---HHHHHHHHHH
T ss_pred cCCChhHEEEecCchhcceeeEe----cCcEEEEeCCCC-CHHHHHHHHHH
Confidence 99999999999999999999987 899999999985 56777776654
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.6e-08 Score=84.55 Aligned_cols=88 Identities=10% Similarity=-0.011 Sum_probs=62.6
Q ss_pred CcEEEEcCCchHHHHHHHHHhhCCCCCCc---eEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCC
Q 024758 153 SRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 229 (263)
Q Consensus 153 ~~laI~TnK~~~~a~~iL~~~~gl~~~f~---~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 229 (263)
...+++|++....++..+++ .|+..++. .-+......|...+..+++.+|++++++++|||+.+|+.+.+. +
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~----a 182 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRV----V 182 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHh----C
Confidence 44567788888888889985 77653211 1111111278999999999999999999999999999999987 7
Q ss_pred CCcEEEEcCCCCChHHHHhh
Q 024758 230 GWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 230 gi~~v~v~wGy~~~~~l~~~ 249 (263)
|+.+ ++ | +..+++.+.
T Consensus 183 g~~v-am--~-na~~~~k~~ 198 (215)
T TIGR01487 183 GFKV-AV--A-NADDQLKEI 198 (215)
T ss_pred CCeE-Ec--C-CccHHHHHh
Confidence 7643 33 3 335555543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.3e-07 Score=81.91 Aligned_cols=100 Identities=23% Similarity=0.274 Sum_probs=75.2
Q ss_pred CCCcccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-----CC-----C-------------
Q 024758 138 NRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG-----P------------- 190 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g-~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-----~~-----p------------- 190 (263)
.+.-||+.++++ +.| +.+.|+|-...-|++.+|++ +|+...|..|++.. ++ |
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 467899999999 556 59999999999999999994 99999999988642 11 1
Q ss_pred --cHHHHHHHHhhC---CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 191 --KVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 191 --kp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
|-.++.++.... |+.-++.+||||+-+|+-.-.. ..+.+++.-.-||.
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~---Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLR---LRACDVAMPRKGFP 214 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchh---cccCceecccCCCc
Confidence 223444443332 6677899999999999976654 46677776666764
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.6e-07 Score=80.17 Aligned_cols=53 Identities=9% Similarity=-0.117 Sum_probs=44.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|+++++++.|||+.||+.+-+. +|. +|.-| +..+++.+.+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~----ag~---~vAm~-NA~~~vK~~A 248 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEY----AGV---GVAMG-NAIPSVKEVA 248 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh----CCc---eEEec-CccHHHHHhc
Confidence 78999999999999999999999999999999986 786 44445 4466666554
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.8e-07 Score=82.49 Aligned_cols=85 Identities=12% Similarity=0.054 Sum_probs=60.4
Q ss_pred hCCCcEEEEcCCchHHHH-HHHHHhhCCCCCCceEE---cCC----CCCcHHHHHHHHhhCCCCCCcE-EEEcCCh-hhH
Q 024758 150 LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQGLRL-HFVEDRL-ATL 219 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~-~iL~~~~gl~~~f~~v~---G~~----~~pkp~~l~~~l~~l~~~~~~~-l~VGDs~-~Di 219 (263)
++|-...|+||++.-... .-.. +.|...+++.+. |.. .||+|+++..++++++.+++++ +||||+. +||
T Consensus 142 ~~~~~~~i~tN~d~~~~~~~g~~-~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di 220 (236)
T TIGR01460 142 AEGDVPFIAANRDDLVRLGDGRF-RPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDI 220 (236)
T ss_pred hCCCCeEEEECCCCCCCCCCCcE-eecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHH
Confidence 455357888997742111 0111 133433333332 322 2599999999999999998887 9999998 899
Q ss_pred HHhhccCcCCCCcEEEEcCC
Q 024758 220 KNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 220 ~aA~~~~~~Agi~~v~v~wG 239 (263)
++|++ +|+++++|+||
T Consensus 221 ~~A~~----~G~~~i~v~~G 236 (236)
T TIGR01460 221 LGAKN----AGFDTLLVLTG 236 (236)
T ss_pred HHHHH----CCCcEEEEecC
Confidence 99998 99999999998
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=6.5e-07 Score=79.65 Aligned_cols=53 Identities=15% Similarity=-0.087 Sum_probs=44.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||. .|++ | +..+++.+.+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~----ag~-~vAm--~-NA~~~vK~~A 242 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSM----AGK-GCIM--G-NAHQRLKDLL 242 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHH----cCC-Ceee--c-CCcHHHHHhC
Confidence 79999999999999999999999999999999986 786 3455 4 4466676654
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.3e-06 Score=72.46 Aligned_cols=83 Identities=16% Similarity=0.259 Sum_probs=61.0
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC-------CCCce----------EEcCC-C--C-CcH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT-------ITPDR----------LYGLG-T--G-PKV 192 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~-------~~f~~----------v~G~~-~--~-pkp 192 (263)
..++=||.++..+ +++++..|+|+-...++..++++ .+-. .+++- |.+.+ + + .||
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~ 149 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS 149 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hccccceeeeEEeecCceEcCCCceeeecCCccccCCCcc
Confidence 3578899999999 89999999999999999999996 6511 11111 11111 1 1 467
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 193 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 193 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
..+.... -+++..+|.||+..|+.+|+.
T Consensus 150 ~vI~~l~----e~~e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 150 SVIHELS----EPNESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred hhHHHhh----cCCceEEEecCCcccccHhhh
Confidence 7666544 356679999999999999986
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.2e-07 Score=92.21 Aligned_cols=99 Identities=12% Similarity=0.100 Sum_probs=77.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-C-------------------CCcHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------------GPKVNV 194 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~-------------------~pkp~~ 194 (263)
.+|+||+.++++ ++|+++.++|++....++.+.++ .|+..+++.+++++ - +..|+-
T Consensus 527 Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred CcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 378999999999 89999999999999999999996 99987666543321 0 144655
Q ss_pred HHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 195 LKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 195 l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
=..+++.++...+.+.||||+.+|+.+.++ |+ ||+.||++..+
T Consensus 606 K~~iv~~lq~~g~~v~mvGDGvND~pAl~~----Ad---VGia~g~~g~~ 648 (884)
T TIGR01522 606 KMKIVKALQKRGDVVAMTGDGVNDAPALKL----AD---IGVAMGQTGTD 648 (884)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHHh----CC---eeEecCCCcCH
Confidence 455555555556789999999999999997 78 59999975333
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.4e-07 Score=75.35 Aligned_cols=93 Identities=16% Similarity=0.106 Sum_probs=59.7
Q ss_pred cccCCCCcccHHHHHH---hCCCcEEEEcCCch-------HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCC
Q 024758 134 WIGANRLYPGVSDALK---LASSRIYIVTSNQS-------RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE 203 (263)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~~laI~TnK~~-------~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~ 203 (263)
.....+|+||+.|+|+ +.|..+.++|+.+. ....+-|++|||-..+-..+++.+ |. .++
T Consensus 68 ~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---K~--------~v~ 136 (191)
T PF06941_consen 68 FFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---KT--------LVG 136 (191)
T ss_dssp TTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---GG--------GC-
T ss_pred hhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---CC--------eEe
Confidence 3445689999999999 77877777776553 356677887677544445666644 21 223
Q ss_pred CCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHH
Q 024758 204 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHI 245 (263)
Q Consensus 204 ~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~ 245 (263)
.+ ++|.|++..+..+.+ +|++++....-|+....
T Consensus 137 ~D----vlIDD~~~n~~~~~~----~g~~~iLfd~p~Nr~~~ 170 (191)
T PF06941_consen 137 GD----VLIDDRPHNLEQFAN----AGIPVILFDQPYNRDES 170 (191)
T ss_dssp -S----EEEESSSHHHSS-SS----ESSEEEEE--GGGTT--
T ss_pred cc----EEecCChHHHHhccC----CCceEEEEcCCCCCCCC
Confidence 33 999999999988765 89999999988876543
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.8e-06 Score=71.07 Aligned_cols=84 Identities=19% Similarity=0.394 Sum_probs=67.6
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC--C------Cc---eEEcCC-------CCCcHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--T------PD---RLYGLG-------TGPKVNVL 195 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~--~------f~---~v~G~~-------~~pkp~~l 195 (263)
..++=|||+|+.+ ++|.+++++|.--..++..+-.+ +||.. - |+ ...|.+ ++.|++.+
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 4578899999998 89999999999999999999996 99964 1 11 112212 23789999
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
..+.+ +.+-..++||||..+|+++..
T Consensus 165 ~~lrk--~~~~~~~~mvGDGatDlea~~ 190 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGATDLEAMP 190 (227)
T ss_pred HHHHh--CCChheeEEecCCccccccCC
Confidence 98877 778888999999999998864
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.5e-06 Score=77.73 Aligned_cols=53 Identities=13% Similarity=-0.110 Sum_probs=43.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|+++++++.|||+.||+.+=+. +|. .|++ | +..+++.+.+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~----ag~-~vAm--~-Na~~~vK~~A 240 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGS----VGR-GFIM--G-NAMPQLRAEL 240 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHH----cCC-ceec--c-CChHHHHHhC
Confidence 78999999999999999999999999999999986 775 3444 4 4566666554
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.2e-05 Score=66.51 Aligned_cols=94 Identities=18% Similarity=0.203 Sum_probs=70.8
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh---CCC----CCCceEEcCCCCCcHHHHHHHHhhCCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~---gl~----~~f~~v~G~~~~pkp~~l~~~l~~l~~~~ 206 (263)
...+||.+.+.|+ ++|++++|-||-+-..-+-+.. |- .|. -|||.-+|. |.....+.++....|.+|
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fg-hs~agdL~~lfsGyfDttiG~--KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFG-HSDAGDLNSLFSGYFDTTIGK--KRESQSYAKIAGDIGLPP 177 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhc-ccccccHHhhhcceeeccccc--cccchhHHHHHHhcCCCc
Confidence 3589999999999 8999999999877554333332 11 222 344443332 133457888999999999
Q ss_pred CcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 207 ~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
.+.+|+-|.+.-+.||+. +|+.++++.
T Consensus 178 ~eilFLSDn~~EL~AA~~----vGl~t~l~~ 204 (229)
T COG4229 178 AEILFLSDNPEELKAAAG----VGLATGLAV 204 (229)
T ss_pred hheEEecCCHHHHHHHHh----cchheeeee
Confidence 999999999999999998 899998764
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.2e-06 Score=75.86 Aligned_cols=90 Identities=14% Similarity=0.147 Sum_probs=61.9
Q ss_pred hCCCcEEEEcCCch-----HHHHHHHHHhhCCCCCCceEEcCC-------CC-CcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024758 150 LASSRIYIVTSNQS-----RFVETLLRELAGVTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (263)
Q Consensus 150 ~~g~~laI~TnK~~-----~~a~~iL~~~~gl~~~f~~v~G~~-------~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~ 216 (263)
+.-+++.+.+.+.. ......+.+ +|+. +..++++. .+ +|...+..+++.+|++++++++|||+.
T Consensus 117 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ 193 (249)
T TIGR01485 117 QRPHKVSFFLDPEAAPEVIKQLTEMLKE-TGLD--VKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG 193 (249)
T ss_pred cCCeeEEEEechhhhhHHHHHHHHHHHh-cCCC--EEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh
Confidence 34466667665432 223444553 4553 23444431 12 899999999999999999999999999
Q ss_pred hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 217 ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 217 ~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+|+.+.+. ++..+|+|. +..+++.+.
T Consensus 194 ND~~ml~~----~~~~~va~~---na~~~~k~~ 219 (249)
T TIGR01485 194 NDIELFEI----GSVRGVIVS---NAQEELLQW 219 (249)
T ss_pred hHHHHHHc----cCCcEEEEC---CCHHHHHHH
Confidence 99999985 577888884 446666654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.6e-06 Score=72.09 Aligned_cols=82 Identities=13% Similarity=0.113 Sum_probs=63.1
Q ss_pred cCCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCC-CCC-ceEEcCCC--CCcHHHHHHHHhhCCCCCCcE
Q 024758 136 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGT--GPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 136 ~~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~-~~f-~~v~G~~~--~pkp~~l~~~l~~l~~~~~~~ 209 (263)
..++++||+.++|+ +++++++|+|||++..|..+++. ++.. .+| +.|+|.+. ++...-+. .-++.+.+.+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~---~i~~~d~~~v 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLL---RLFPADESMV 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHH---HHcCCCcccE
Confidence 34689999999999 77799999999999999999995 9988 588 78888653 22211122 2246678899
Q ss_pred EEEcCChhhHHH
Q 024758 210 HFVEDRLATLKN 221 (263)
Q Consensus 210 l~VGDs~~Di~a 221 (263)
++|+|++.=...
T Consensus 131 vivDd~~~~~~~ 142 (156)
T TIGR02250 131 VIIDDREDVWPW 142 (156)
T ss_pred EEEeCCHHHhhc
Confidence 999999855444
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.3e-06 Score=84.65 Aligned_cols=92 Identities=15% Similarity=0.122 Sum_probs=72.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
.+++||+.++|+ ++|++++|+|+..+..++.+.++ +||+.++. .....|++.+.++.+ +.+++||||
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~----~~p~~K~~~v~~l~~-----~~~v~mvGD 636 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG----LLPEDKVKAVTELNQ-----HAPLAMVGD 636 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC----CCHHHHHHHHHHHhc-----CCCEEEEEC
Confidence 489999999999 78999999999999999999996 99964332 111147776666432 357999999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
+.||+.+.++ |+ ||+.||.++....
T Consensus 637 giNDapAl~~----A~---vgia~g~~~~~a~ 661 (741)
T PRK11033 637 GINDAPAMKA----AS---IGIAMGSGTDVAL 661 (741)
T ss_pred CHHhHHHHHh----CC---eeEEecCCCHHHH
Confidence 9999999987 77 7999998765543
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.23 E-value=1e-05 Score=71.60 Aligned_cols=52 Identities=12% Similarity=-0.042 Sum_probs=42.4
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
.|...+..+++.++++++++++|||+.+|+.+.+. +|+. +++ | +..+++.+.
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----~~~~-~a~--~-na~~~~k~~ 239 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEA----AGYG-VAM--G-NADEELKAL 239 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHh----CCce-eEe--c-CchHHHHHh
Confidence 78999999999999999999999999999999987 7864 333 4 345555543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.2e-05 Score=70.49 Aligned_cols=90 Identities=9% Similarity=-0.134 Sum_probs=58.1
Q ss_pred CCCcEEEEcCCch----HHHHHHHHHhhCCCCCCceEEcC----C---CC-CcHHHHHHHHhhCCCCCCcEEEEcCChhh
Q 024758 151 ASSRIYIVTSNQS----RFVETLLRELAGVTITPDRLYGL----G---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLAT 218 (263)
Q Consensus 151 ~g~~laI~TnK~~----~~a~~iL~~~~gl~~~f~~v~G~----~---~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~D 218 (263)
..+++.+.+.... ..+...+++ +++. +..+++. + .+ +|+..+..+++++|++++++++|||+.+|
T Consensus 111 ~~~~i~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD 187 (236)
T TIGR02471 111 GPFKISYLLDPEGEPILPQIRQRLRQ-QSQA--AKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGND 187 (236)
T ss_pred CCeeEEEEECcccchHHHHHHHHHHh-ccCC--EEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccH
Confidence 3466666554321 233445553 5532 3344443 1 12 89999999999999999999999999999
Q ss_pred HHHhhccCcCCCCcEEEEcCCCCChHHHHhhhh
Q 024758 219 LKNVIKEPELDGWNLYLGNLFRFLCHILLLYLY 251 (263)
Q Consensus 219 i~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~ 251 (263)
+.+.+. +|. ++.+|- ..+++.+.+.
T Consensus 188 ~~ml~~----~~~---~iav~n-a~~~~k~~a~ 212 (236)
T TIGR02471 188 EEMLRG----LTL---GVVVGN-HDPELEGLRH 212 (236)
T ss_pred HHHHcC----CCc---EEEEcC-CcHHHHHhhc
Confidence 999975 663 334453 4455554443
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.3e-06 Score=69.13 Aligned_cols=88 Identities=23% Similarity=0.302 Sum_probs=61.1
Q ss_pred CcccHHHHHH---hCCCcEEEEcCC---ch-----------HHHHHHHHHhhCCCCCCceEEcC--C--CCCcHHHHHHH
Q 024758 140 LYPGVSDALK---LASSRIYIVTSN---QS-----------RFVETLLRELAGVTITPDRLYGL--G--TGPKVNVLKQL 198 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK---~~-----------~~a~~iL~~~~gl~~~f~~v~G~--~--~~pkp~~l~~~ 198 (263)
++|+|.+.|+ ++|++++|+||- .. ...+.+++. +|+. +...+.. + .||+|-++..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 4579999999 899999999986 22 345566774 6664 3333332 1 45999999999
Q ss_pred HhhCCC----CCCcEEEEcCC-----------hhhHHHhhccCcCCCCcEE
Q 024758 199 QKKPEH----QGLRLHFVEDR-----------LATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 199 l~~l~~----~~~~~l~VGDs-----------~~Di~aA~~~~~~Agi~~v 234 (263)
++.++. +.++++||||+ ..|..-|.| +||++.
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N----~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALN----CGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHH----HT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHH----cCCccc
Confidence 999874 88899999996 688999987 898763
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.7e-05 Score=76.38 Aligned_cols=54 Identities=11% Similarity=-0.155 Sum_probs=43.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLY 251 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~ 251 (263)
.|...+..+++.+|+++++++.|||+.||+++-+. ||. +|.-| +..+++.+.+-
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~----AG~---gVAMg-NA~eeVK~~Ad 560 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQL----ASL---GVALS-NGAEKTKAVAD 560 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHH----CCC---EEEeC-CCCHHHHHhCC
Confidence 79999999999999999999999999999999986 786 44445 33555655443
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.3e-05 Score=69.65 Aligned_cols=93 Identities=20% Similarity=0.263 Sum_probs=75.2
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEEcCC--------------
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG-------------- 187 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~~-------------- 187 (263)
+=|....+++ +.|++++|||=.++ +.++..|++ -+-+.-...|++.-
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 4566777777 79999999995554 368888884 66665556666421
Q ss_pred -CCCcHHH--H--HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 188 -TGPKVNV--L--KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 188 -~~pkp~~--l--~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
.+|.|++ + .+++++.|+.|++++||.|+...+++|++ .|+.++.++
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~----lGi~ai~f~ 205 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALK----EGYIALHVT 205 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHH----CCCEEEEcC
Confidence 1388888 7 99999999999999999999999999998 899999987
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=9.7e-06 Score=72.11 Aligned_cols=53 Identities=13% Similarity=-0.094 Sum_probs=41.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|+++++++.|||+.+|+.+=+. +|. +|.=|-. .+++.+.+
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~----ag~---gvam~Na-~~~~k~~A 241 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEV----AGL---GVAMGNA-DEELKELA 241 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHh----cCe---eeeccCC-CHHHHhhC
Confidence 78899999999999999999999999999999875 664 3333433 45555443
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.8e-05 Score=69.36 Aligned_cols=40 Identities=10% Similarity=-0.051 Sum_probs=34.1
Q ss_pred CcHHHHHHHHhhCCC--CCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 190 PKVNVLKQLQKKPEH--QGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 190 pkp~~l~~~l~~l~~--~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
.|+..+..+++.++. +++++++|||+.+|+.+-+. +|+.+
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~----ag~~v 222 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEV----VDLAF 222 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHh----CCCcE
Confidence 788888888888865 67799999999999999986 78754
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.7e-05 Score=72.89 Aligned_cols=88 Identities=15% Similarity=0.225 Sum_probs=68.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHH---HHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLL---RELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL---~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
..+|||+.++|+ ++|++++++||++....+.++ ++ +|+...++.|+++. ..+...++..+....+.+|
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~-----~~~~~~l~~~~~~~~~~V~ 116 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSS-----FAAAAYLKSINFPKDKKVY 116 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehH-----HHHHHHHHhhccCCCCEEE
Confidence 368999999998 799999999999955544444 64 89888888888753 3555666666665556799
Q ss_pred EcCChhhHHHhhccCcCCCCcEEE
Q 024758 212 VEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
|+++..+.+.+++ +|+.+++
T Consensus 117 viG~~~~~~~l~~----~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEELEL----AGFQYLG 136 (311)
T ss_pred EEcCHHHHHHHHH----CCCEEec
Confidence 9999999999986 8988754
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.8e-05 Score=67.50 Aligned_cols=45 Identities=9% Similarity=-0.088 Sum_probs=38.3
Q ss_pred CcHHHHHHHHhhCCCC--CCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 190 PKVNVLKQLQKKPEHQ--GLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~--~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.|...+..+++.+|++ .+++++|||+.+|+.+.+. +|.. |++..+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~----ag~~-vam~Na 222 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEV----VDLA-VVVPGP 222 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHH----CCEE-EEeCCC
Confidence 7888999999999999 9999999999999999986 7754 345444
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.8e-06 Score=78.39 Aligned_cols=52 Identities=13% Similarity=0.013 Sum_probs=43.2
Q ss_pred CCcHHHHHHHHhhC--------CC-----CCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 189 GPKVNVLKQLQKKP--------EH-----QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 189 ~pkp~~l~~~l~~l--------~~-----~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
||+|.++..+++.+ +. ++++++||||+. +||.+|++ +|+.++.|.+|-.+.+
T Consensus 233 KP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~----~G~~silV~tG~~~~~ 298 (321)
T TIGR01456 233 KPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQN----YGWFSCLVKTGVYNGG 298 (321)
T ss_pred CCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHh----CCceEEEecccccCCC
Confidence 48999999887776 33 457999999998 99999987 9999999999944443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.94 E-value=5.5e-05 Score=67.84 Aligned_cols=38 Identities=8% Similarity=-0.164 Sum_probs=35.4
Q ss_pred CcHHHHHHHHhhCCC---CCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 190 PKVNVLKQLQKKPEH---QGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 190 pkp~~l~~~l~~l~~---~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
.|...+..+++.+|+ ++++++.|||+.||+.+=+. +|.
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~----ag~ 227 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDV----MDY 227 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHh----CCE
Confidence 789999999999999 99999999999999999886 775
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=97.94 E-value=7e-05 Score=63.04 Aligned_cols=92 Identities=17% Similarity=0.155 Sum_probs=67.9
Q ss_pred CCCcccHHHHHH---hCCC--cEEEEcCC-------chHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCC-
Q 024758 138 NRLYPGVSDALK---LASS--RIYIVTSN-------QSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEH- 204 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~--~laI~TnK-------~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~- 204 (263)
..+.|.+.+.++ +.+. ++.|+||. ....++.+-+. +|+. .+.-... ||..+.++++.++.
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~k--KP~~~~~i~~~~~~~ 130 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAK--KPGCFREILKYFKCQ 130 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCC--CCccHHHHHHHHhhc
Confidence 467888888888 4554 59999997 47888888885 8863 3333333 44444555555543
Q ss_pred ----CCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCC
Q 024758 205 ----QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 205 ----~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
.|++++||||+. +||.+|.. .|+.+|.|+-|-
T Consensus 131 ~~~~~p~eiavIGDrl~TDVl~gN~----~G~~tilv~~gv 167 (168)
T PF09419_consen 131 KVVTSPSEIAVIGDRLFTDVLMGNR----MGSYTILVTDGV 167 (168)
T ss_pred cCCCCchhEEEEcchHHHHHHHhhc----cCceEEEEecCc
Confidence 599999999997 79999987 899999998874
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00037 Score=63.30 Aligned_cols=57 Identities=19% Similarity=0.044 Sum_probs=52.4
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
||.+.++..++++.++.|++++||||+. +||.-|++ +|+.++.|..|-++.+..+..
T Consensus 224 KP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~----~G~~TLLvltGv~~led~~~~ 281 (306)
T KOG2882|consen 224 KPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKN----CGFKTLLVLSGVTTLEDILEA 281 (306)
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhc----cCcceEEEecCcCcHHHHHhc
Confidence 3899999999999999999999999997 69999997 899999999999988887765
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00013 Score=76.20 Aligned_cols=94 Identities=17% Similarity=0.164 Sum_probs=70.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC--------c-------------------eEEcCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP--------D-------------------RLYGLG 187 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f--------~-------------------~v~G~~ 187 (263)
-+|+||+.+.++ ++|+++.++|+.....+..+.++ .|+...- + .|++.
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar- 613 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR- 613 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe-
Confidence 368999999999 89999999999999999999996 9995421 1 12221
Q ss_pred CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 188 TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 188 ~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
..|+-=.++++.++...+.+.|+||+.||+.+.++ |++ |+.||.++
T Consensus 614 --~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~----AdV---Gia~g~g~ 659 (917)
T TIGR01116 614 --VEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKK----ADI---GIAMGSGT 659 (917)
T ss_pred --cCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHh----CCe---eEECCCCc
Confidence 12332244444455556788999999999999987 887 88888553
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.72 E-value=5.3e-05 Score=68.91 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=42.4
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC
Q 024758 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (263)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~ 187 (263)
||+.|+|+ ++|++++|+||++++.+...|++ +|+..||+.|++++
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~G 196 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGG 196 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECC
Confidence 99999999 88999999999999999999996 99999999999865
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00054 Score=56.90 Aligned_cols=88 Identities=16% Similarity=0.225 Sum_probs=54.4
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHh--hCCCCCCceEEcCC---C--------C--C---cHHHHH
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVE---TLLREL--AGVTITPDRLYGLG---T--------G--P---KVNVLK 196 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~---~iL~~~--~gl~~~f~~v~G~~---~--------~--p---kp~~l~ 196 (263)
.||+.++++ ++|+++.++|+.+...+. ..|+.. .|.......+++.. . . | |.+.+.
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~ 108 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLR 108 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHH
Confidence 477777777 789999999999988774 666631 13222223444322 1 1 2 455666
Q ss_pred HHHhhCCCCCCcEEE-EcCChhhHHHhhccCcCCCCc
Q 024758 197 QLQKKPEHQGLRLHF-VEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 197 ~~l~~l~~~~~~~l~-VGDs~~Di~aA~~~~~~Agi~ 232 (263)
.+.+.+.-..-..+. +|++.+|+++=++ +||+
T Consensus 109 ~i~~~~~~~~~~f~~~~gn~~~D~~~y~~----~gi~ 141 (157)
T smart00775 109 DIKSLFPPQGNPFYAGFGNRITDVISYSA----VGIP 141 (157)
T ss_pred HHHHhcCCCCCCEEEEeCCCchhHHHHHH----cCCC
Confidence 666544322223343 7889999998876 7876
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=4.9e-05 Score=62.85 Aligned_cols=76 Identities=24% Similarity=0.323 Sum_probs=64.2
Q ss_pred HHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCc
Q 024758 148 LKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (263)
Q Consensus 148 L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 227 (263)
|.+.|++++|+|.+....++.-.+. +|+..+| .|.. .|-..+.++++++++.++++.||||-.+|+-.=++
T Consensus 47 l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~---qG~~--dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~--- 117 (170)
T COG1778 47 LLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLY---QGIS--DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK--- 117 (170)
T ss_pred HHHcCCeEEEEeCCCCHHHHHHHHH-cCCceee---echH--hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH---
Confidence 3378999999999999999999996 9997544 3433 57889999999999999999999999999987766
Q ss_pred CCCCcE
Q 024758 228 LDGWNL 233 (263)
Q Consensus 228 ~Agi~~ 233 (263)
.|.++
T Consensus 118 -vGls~ 122 (170)
T COG1778 118 -VGLSV 122 (170)
T ss_pred -cCCcc
Confidence 56554
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00016 Score=58.22 Aligned_cols=87 Identities=17% Similarity=0.146 Sum_probs=70.4
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhC------CCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP------EHQGL 207 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l------~~~~~ 207 (263)
.+++||.|+++|+ ..|+-++.+|=+...-+.+.|.. +++..||+.++-....-|-.++.+++..+ .++|.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcc
Confidence 4689999999999 78999999998999999999996 99999999998654333445666666554 47899
Q ss_pred cEEEEcCChhhHHHhhc
Q 024758 208 RLHFVEDRLATLKNVIK 224 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA~~ 224 (263)
+++|+.|+..-+..-..
T Consensus 118 ~Ivy~DDR~iH~~~Iwe 134 (164)
T COG4996 118 EIVYLDDRRIHFGNIWE 134 (164)
T ss_pred eEEEEecccccHHHHHH
Confidence 99999999877665554
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0026 Score=62.23 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=65.2
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-
Q 024758 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG- 187 (263)
Q Consensus 109 ~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~- 187 (263)
|++.+++++...++.+.|... .++|...+.++++|.. +|+|..++..++.++++++|++ .|+|.+
T Consensus 89 G~~~~el~~~~r~~l~~f~~~---------~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTeL 154 (497)
T PLN02177 89 GLKIRDIELVSRSVLPKFYAE---------DVHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTEL 154 (497)
T ss_pred CCCHHHHHHHHHHHHHHHHHH---------hcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEeccc
Confidence 677777766665555554321 3788888888766654 9999999999999997446775 444432
Q ss_pred ------------CCCc----HHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 188 ------------TGPK----VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 188 ------------~~pk----p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
.+++ .+-+..+.+.+|.+... +..|||.+|...-.-
T Consensus 155 ev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~ 206 (497)
T PLN02177 155 EVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSI 206 (497)
T ss_pred EECcCCEEeeeecCCCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHh
Confidence 1121 12233333445543333 899999999987653
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0007 Score=59.74 Aligned_cols=81 Identities=19% Similarity=0.126 Sum_probs=57.0
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCCCceEEcCC--CCC------cHHHHHHHHhh-
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLG--TGP------KVNVLKQLQKK- 201 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~iL~~~~gl~~~f~~v~G~~--~~p------kp~~l~~~l~~- 201 (263)
..++.||+.++++ ++|+++.++|+.++.. +..-|++ .|+..+ +.++-.. ... |.+...++.++
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~G 195 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEG 195 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCC
Confidence 3588999999999 8999999999999877 7777885 888755 5555332 222 44444444432
Q ss_pred CCCCCCcEEEEcCChhhHHHhh
Q 024758 202 PEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
..+ ...|||...|+.++-
T Consensus 196 YrI----v~~iGDq~sDl~G~~ 213 (229)
T TIGR01675 196 YRI----WGNIGDQWSDLLGSP 213 (229)
T ss_pred ceE----EEEECCChHHhcCCC
Confidence 223 268999999997653
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00015 Score=66.16 Aligned_cols=73 Identities=21% Similarity=0.192 Sum_probs=58.1
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-----------------------------
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----------------------------- 188 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----------------------------- 188 (263)
=|||.++|+ ++|++++|+|||+++.+..+|++ +|+..+|+.|+|++.
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~ 228 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVT 228 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCC
Confidence 399999999 89999999999999999999996 999999998887641
Q ss_pred ---C-Cc-HHHHHHHHhhCCCCCCc-EEEEcC
Q 024758 189 ---G-PK-VNVLKQLQKKPEHQGLR-LHFVED 214 (263)
Q Consensus 189 ---~-pk-p~~l~~~l~~l~~~~~~-~l~VGD 214 (263)
. || |.+++..|++.|+.--. .-.|.|
T Consensus 229 ~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDD 260 (303)
T PHA03398 229 DVKNLPKSPRVVLWYLRKKGVNYFKTITLVDD 260 (303)
T ss_pred cccCCCCCCeehHHHHHHcCcceeccEEEecc
Confidence 0 22 67788888888876433 335554
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.001 Score=63.57 Aligned_cols=52 Identities=15% Similarity=-0.118 Sum_probs=43.3
Q ss_pred CcHHHHHHHHhhC---CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 190 PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 190 pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
.|...+..+++++ |+++++++.+||+.||++.=+. +|+..|+| | +..+++.+
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~----ag~~gvam--~-NA~~elk~ 229 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSV----PDVYGVMV--S-NAQEELLQ 229 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhc----CCCCEEEE--c-CCcHHHHH
Confidence 6899999999999 9999999999999999999875 78767777 4 34555654
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00016 Score=63.78 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=55.4
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhhCCCCCCceEE-cCCC-C------CcHHHHHHHHhh-CC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLY-GLGT-G------PKVNVLKQLQKK-PE 203 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~---~a~~iL~~~~gl~~~f~~v~-G~~~-~------pkp~~l~~~l~~-l~ 203 (263)
++.||+.++++ ++|+++.++||.++. .+..-|++ .|....-..+. +... . -|.+....+.++ +.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~ 193 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR 193 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhccccccccccccccccchHHHHHHHHcCCc
Confidence 78899999999 899999999986654 56666775 88754333333 3222 1 255666666555 34
Q ss_pred CCCCcEEEEcCChhhHHHhh
Q 024758 204 HQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 204 ~~~~~~l~VGDs~~Di~aA~ 223 (263)
+ +++|||...|+..++
T Consensus 194 I----i~~iGD~~~D~~~~~ 209 (229)
T PF03767_consen 194 I----IANIGDQLSDFSGAK 209 (229)
T ss_dssp E----EEEEESSGGGCHCTH
T ss_pred E----EEEeCCCHHHhhccc
Confidence 4 479999999998843
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0014 Score=65.85 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=35.9
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEE--cCChhhHHHhhccCcCCCCcEE
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFV--EDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~V--GDs~~Di~aA~~~~~~Agi~~v 234 (263)
.|...+..+++.++.+.++++.| ||+.||+.+=+. +|..++
T Consensus 613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~----Ag~gVA 655 (694)
T PRK14502 613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLET----VDSPIL 655 (694)
T ss_pred CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHh----CCceEE
Confidence 78999999999999998888888 999999999876 787543
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0018 Score=57.63 Aligned_cols=48 Identities=13% Similarity=-0.092 Sum_probs=36.9
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
.|...+..+++++++++++++.+|||-||+..=. .+...|.| |-..++
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~-----~~~~~vvV--~Na~~e 212 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLE-----GGDHGVVV--GNAQPE 212 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHC-----CSSEEEE---TTS-HH
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHc-----CcCCEEEE--cCCCHH
Confidence 6889999999999999999999999999999874 56777666 534444
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0028 Score=51.11 Aligned_cols=91 Identities=11% Similarity=0.234 Sum_probs=69.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
-++|+.|.+.+. +. +.++|+|.-..-+..++++ ..|+.- +.|... .+|+.=.++++.|+.+-+.++||||
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae-~~gi~~--~rv~a~---a~~e~K~~ii~eLkk~~~k~vmVGn 101 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAE-FVGIPV--ERVFAG---ADPEMKAKIIRELKKRYEKVVMVGN 101 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHH-HcCCce--eeeecc---cCHHHHHHHHHHhcCCCcEEEEecC
Confidence 479999999999 55 9999999999999999999 488753 344421 3455556666677767789999999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
..||+.+-++ |.+-.+-+.-+
T Consensus 102 GaND~laLr~----ADlGI~tiq~e 122 (152)
T COG4087 102 GANDILALRE----ADLGICTIQQE 122 (152)
T ss_pred CcchHHHhhh----cccceEEeccC
Confidence 9999999987 66555444433
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0014 Score=63.31 Aligned_cols=95 Identities=18% Similarity=0.229 Sum_probs=67.1
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhC--------CCCCCceEEcCCCCC-------------------
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG--------VTITPDRLYGLGTGP------------------- 190 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~g--------l~~~f~~v~G~~~~p------------------- 190 (263)
=|.+..+|+ +.|.++.++||.+-.++..+++..+| |..+||.|+....||
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l 264 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKL 264 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSE
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcc
Confidence 478888888 88999999999999999999996443 568999999643211
Q ss_pred ---c---H---------HHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcC
Q 024758 191 ---K---V---------NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 191 ---k---p---------~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~w 238 (263)
+ + -.+..+.+.+|....+++||||+. .||...++ ..|+++++|-.
T Consensus 265 ~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~---~~gWrT~~Ii~ 325 (448)
T PF05761_consen 265 KWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKK---RHGWRTAAIIP 325 (448)
T ss_dssp ECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHH---HH-SEEEEE-T
T ss_pred ccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhcc---ccceEEEEEeh
Confidence 1 0 135566677788888999999997 69998887 37999999943
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0016 Score=57.83 Aligned_cols=39 Identities=15% Similarity=-0.043 Sum_probs=33.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhhHHHhhccCcCCCCcEEEEc
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
.|...+..++ ++++++.+|| +.||++.-+. -|+.++.|+
T Consensus 189 nKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~----~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFES----ERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhC----CCcceEEeC
Confidence 6777777776 8999999999 7999999974 499999996
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.02 Score=52.42 Aligned_cols=74 Identities=7% Similarity=0.026 Sum_probs=47.3
Q ss_pred EEEcCCchHHHHHHHHHhhCCC----CCCceEEc------------------CCC-C-CcHHHHHHHHhhCCC--CCCcE
Q 024758 156 YIVTSNQSRFVETLLRELAGVT----ITPDRLYG------------------LGT-G-PKVNVLKQLQKKPEH--QGLRL 209 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~----~~f~~v~G------------------~~~-~-pkp~~l~~~l~~l~~--~~~~~ 209 (263)
.+-+..+... +..+++ .|+. ..|-.+.| .+. + +|...+..+.+.+.- .+-.+
T Consensus 152 ~~w~~~~~~~-~~~~~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~t 229 (302)
T PRK12702 152 FSYSGDPARL-REAFAQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKA 229 (302)
T ss_pred eEecCCHHHH-HHHHHH-cCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCceE
Confidence 3445555555 777775 7774 33545555 211 2 677777766665543 34478
Q ss_pred EEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 210 HFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 210 l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
+-+|||+||+..=.. +.+++|-
T Consensus 230 iaLGDspND~~mLe~----~D~~vvi 251 (302)
T PRK12702 230 LGIGCSPPDLAFLRW----SEQKVVL 251 (302)
T ss_pred EEecCChhhHHHHHh----CCeeEEe
Confidence 999999999998865 6776654
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0015 Score=56.68 Aligned_cols=51 Identities=12% Similarity=0.003 Sum_probs=44.0
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChh-hHHHhhccCcCCCCcEEEEcCCCCCh
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~-Di~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
||.|..+..+++.+|++|++++||||-.+ |+-+|++ .||+-|.|..|-.-+
T Consensus 181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~----~GMrgilVkTGK~rp 232 (262)
T KOG3040|consen 181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQA----CGMRGILVKTGKFRP 232 (262)
T ss_pred CCCHHHHHHHHHhcCCChHHheEEccccccchhhHhh----hcceeEEeeccccCC
Confidence 38999999999999999999999999876 5677766 899999999985444
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.006 Score=61.77 Aligned_cols=86 Identities=14% Similarity=0.132 Sum_probs=66.1
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
++-||+.+.++ +.|+++.++|.-....++.+-++ +|+++++ ..-. ..|-+.+....++ ...+.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v~----a~~~PedK~~~v~~lq~~----g~~VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDFI----AEATPEDKIALIRQEQAE----GKLVAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEEE----cCCCHHHHHHHHHHHHHc----CCeEEEECC
Confidence 67899999999 89999999999999999999996 9996533 3221 1355666665443 346899999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
..||.-+-++ |++ |+..|-
T Consensus 517 G~NDapAL~~----Adv---GiAm~~ 535 (675)
T TIGR01497 517 GTNDAPALAQ----ADV---GVAMNS 535 (675)
T ss_pred CcchHHHHHh----CCE---eEEeCC
Confidence 9999999876 774 566663
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.027 Score=50.97 Aligned_cols=80 Identities=15% Similarity=0.153 Sum_probs=51.2
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhhCCCCCCceEEc--C-CCC------CcHHHHHHHHhh
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYG--L-GTG------PKVNVLKQLQKK 201 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~---~a~~iL~~~~gl~~~f~~v~G--~-~~~------pkp~~l~~~l~~ 201 (263)
..++.||+.++.+ ++|+++.++|+.++. .+..=|++ .|...+ +.++= . +.. .|.+.-.++.++
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 4678999999999 899999999999864 34455554 677544 33332 2 111 233333333332
Q ss_pred -CCCCCCcEEEEcCChhhHHHh
Q 024758 202 -PEHQGLRLHFVEDRLATLKNV 222 (263)
Q Consensus 202 -l~~~~~~~l~VGDs~~Di~aA 222 (263)
+.+ ...|||...|+.+.
T Consensus 221 GYrI----v~~iGDq~sDl~G~ 238 (275)
T TIGR01680 221 GYNI----VGIIGDQWNDLKGE 238 (275)
T ss_pred CceE----EEEECCCHHhccCC
Confidence 223 26899999999655
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.012 Score=59.58 Aligned_cols=87 Identities=15% Similarity=0.119 Sum_probs=65.4
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
++-||+++.++ +.|+++.++|.-....+..+-++ .|++.+| ..-.. .|-+.+.... -..+-+.|+||
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~----A~~~PedK~~iV~~lQ----~~G~~VaMtGD 511 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFV----AECKPEDKINVIREEQ----AKGHIVAMTGD 511 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEE----cCCCHHHHHHHHHHHH----hCCCEEEEECC
Confidence 67899999999 78999999999999999999996 9997543 32211 3444554433 33455789999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
..||.-+=++ |.+ |+.-|-+
T Consensus 512 GvNDAPALa~----ADV---GIAMgsG 531 (673)
T PRK14010 512 GTNDAPALAE----ANV---GLAMNSG 531 (673)
T ss_pred ChhhHHHHHh----CCE---EEEeCCC
Confidence 9999998876 664 6677733
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.003 Score=53.69 Aligned_cols=40 Identities=15% Similarity=0.028 Sum_probs=36.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+|+..+..++++++.+++++++|||+.+|+.+.+. +|+.+
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~----~~~~v 202 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMFEV----AGLAV 202 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH----cCCce
Confidence 89999999999999999999999999999999986 67654
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0039 Score=55.09 Aligned_cols=51 Identities=12% Similarity=0.012 Sum_probs=41.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC---cCCCCcEEEEcCCC
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP---ELDGWNLYLGNLFR 240 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~---~~Agi~~v~v~wGy 240 (263)
.|...+..++++++..+.+++||||+.+|+.+.+.+. ..-|..++.|.+|-
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~ 220 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS 220 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC
Confidence 5779999999999999999999999999999998620 11167788887773
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.013 Score=59.42 Aligned_cols=87 Identities=15% Similarity=0.166 Sum_probs=65.6
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
++-||+++.++ +.|+++.++|.-....++.+-++ .|+++ ++..-.. .|-+.+....+ ..+-+.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~----v~A~~~PedK~~iV~~lQ~----~G~~VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDD----FLAEATPEDKLALIRQEQA----EGRLVAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcE----EEccCCHHHHHHHHHHHHH----cCCeEEEECC
Confidence 57899999998 89999999999999999999996 99965 3333221 35555555433 3345789999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
..||.-+=++ |.| |+.-|-+
T Consensus 516 GvNDAPALa~----ADV---GIAMgsG 535 (679)
T PRK01122 516 GTNDAPALAQ----ADV---GVAMNSG 535 (679)
T ss_pred CcchHHHHHh----CCE---eEEeCCC
Confidence 9999988876 664 6666733
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.036 Score=49.64 Aligned_cols=100 Identities=18% Similarity=0.253 Sum_probs=73.8
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHhhCCCCCCce------E----E-c-CC------------CC-C
Q 024758 142 PGVSDALK---LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDR------L----Y-G-LG------------TG-P 190 (263)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~~~~a~---~iL~~~~gl~~~f~~------v----~-G-~~------------~~-p 190 (263)
|.+.++++ ++|+++..+|..+..+.. +-|++ +||+.--.. + . . .. .+ +
T Consensus 84 ~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~ 162 (252)
T PF11019_consen 84 SDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQD 162 (252)
T ss_pred hhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCc
Confidence 45555555 899999999987765544 45554 787532111 0 0 1 11 11 7
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 191 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
|.+++..++.+.|..|+.+|||.|+...+.+..++-...||.++|..|..-.
T Consensus 163 KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~~ 214 (252)
T PF11019_consen 163 KGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGAE 214 (252)
T ss_pred cHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcchh
Confidence 8999999999999999999999999999887776666799999999998543
|
The function is not known. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.02 Score=58.34 Aligned_cols=94 Identities=16% Similarity=0.246 Sum_probs=69.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
-++-|+..+.++ ++|+++.++|.-.+..++.+-++ +||+.++..+. ..-|.+.+.++.+ ....+.||||
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Aell---PedK~~~V~~l~~----~g~~VamVGD 607 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAELL---PEDKAEIVRELQA----EGRKVAMVGD 607 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhheccCC---cHHHHHHHHHHHh----cCCEEEEEeC
Confidence 368899999998 89999999999999999999996 99965543222 1146677766553 2356899999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
..||.-+=.+ |. ||+.-|-++.-..
T Consensus 608 GINDAPALA~----Ad---VGiAmG~GtDvA~ 632 (713)
T COG2217 608 GINDAPALAA----AD---VGIAMGSGTDVAI 632 (713)
T ss_pred CchhHHHHhh----cC---eeEeecCCcHHHH
Confidence 9999987654 44 4666676554433
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.0033 Score=55.66 Aligned_cols=48 Identities=13% Similarity=-0.040 Sum_probs=37.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
.|...+..+++. +++++.||| +.||+.+=+. ++...++|. +.++.+..
T Consensus 188 sKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~----~~~~g~~v~---n~~~~~~~ 239 (247)
T PTZ00174 188 DKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYND----PRTIGHSVK---NPEDTIKI 239 (247)
T ss_pred cHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhc----CCCceEEeC---CHHHHHHH
Confidence 788999999887 689999999 8999999875 566556665 44554443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.052 Score=48.91 Aligned_cols=72 Identities=17% Similarity=0.264 Sum_probs=50.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~---~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
..++||+.++|+ ++|++++++||.+ ......-|++ +|+....+.|+. ........+++......++++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~t-----s~~~~~~~l~~~~~~~~~v~~ 90 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFS-----SALCAARLLRQPPDAPKAVYV 90 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEec-----HHHHHHHHHHhhCcCCCEEEE
Confidence 468999999998 7899999999954 4444456674 888655555554 334555556654444567888
Q ss_pred EcCC
Q 024758 212 VEDR 215 (263)
Q Consensus 212 VGDs 215 (263)
||+.
T Consensus 91 iG~~ 94 (279)
T TIGR01452 91 IGEE 94 (279)
T ss_pred EcCH
Confidence 9875
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.026 Score=47.46 Aligned_cols=89 Identities=18% Similarity=0.094 Sum_probs=58.8
Q ss_pred CcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCC-CCCce--EEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 140 LYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITPDR--LYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 140 lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~-~~f~~--v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
+=.+|...|. ++..+++-+|+...++.+..=.- +.+. ..++. |+|.. .| ..+.+.++++ +|+.|
T Consensus 73 ~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~-l~~q~ih~~~l~i~g~h--~K----V~~vrth~id----lf~ed 141 (194)
T COG5663 73 LAQLVKQVLPSLKEEHRLIYITARKADLTRITYAW-LFIQNIHYDHLEIVGLH--HK----VEAVRTHNID----LFFED 141 (194)
T ss_pred HHHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHH-HHHhccchhhhhhhccc--cc----chhhHhhccC----ccccc
Confidence 3367777787 77788999999988887765442 3221 22333 33432 22 3456677887 99999
Q ss_pred ChhhH-HHhhccCcCCCCcEEEEcCCCCCh
Q 024758 215 RLATL-KNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 215 s~~Di-~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
+.... +.|+ ++|++++...--|+-.
T Consensus 142 ~~~na~~iAk----~~~~~vilins~ynRk 167 (194)
T COG5663 142 SHDNAGQIAK----NAGIPVILINSPYNRK 167 (194)
T ss_pred cCchHHHHHH----hcCCcEEEecCccccc
Confidence 97654 4444 4999999998777643
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.026 Score=43.29 Aligned_cols=71 Identities=20% Similarity=0.297 Sum_probs=43.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
..++||+.|+|+ ++|+++.++||.+... ....|++ +|+..-.+.|+. ........+++. ....++++
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~-~Gi~~~~~~i~t-----s~~~~~~~l~~~-~~~~~v~v 85 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK-LGIPVDEDEIIT-----SGMAAAEYLKEH-KGGKKVYV 85 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH-TTTT--GGGEEE-----HHHHHHHHHHHH-TTSSEEEE
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh-cCcCCCcCEEEC-----hHHHHHHHHHhc-CCCCEEEE
Confidence 579999999999 8999999999987443 3333464 888755566664 234445555542 33556777
Q ss_pred EcCC
Q 024758 212 VEDR 215 (263)
Q Consensus 212 VGDs 215 (263)
||-.
T Consensus 86 lG~~ 89 (101)
T PF13344_consen 86 LGSD 89 (101)
T ss_dssp ES-H
T ss_pred EcCH
Confidence 7754
|
... |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.043 Score=46.71 Aligned_cols=95 Identities=14% Similarity=0.074 Sum_probs=65.8
Q ss_pred hhccccCCCCcccHHHHHH---hCCCcEEEEcCCch----HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHH--HHHhh
Q 024758 131 FTTWIGANRLYPGVSDALK---LASSRIYIVTSNQS----RFVETLLRELAGVTITPDRLYGLGTGPKVNVLK--QLQKK 201 (263)
Q Consensus 131 ~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~----~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~--~~l~~ 201 (263)
..+|.+.+-|..=+++++. ++|-.++.+|.... ..++.+-+ .|.|......++.++ +|||.-.. ..+..
T Consensus 106 n~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak-~F~i~~m~pv~f~Gd-k~k~~qy~Kt~~i~~ 183 (237)
T COG3700 106 NNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAK-NFHITNMNPVIFAGD-KPKPGQYTKTQWIQD 183 (237)
T ss_pred hcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHh-hcccCCCcceeeccC-CCCcccccccHHHHh
Confidence 3567777778888888888 89999999996543 33444444 588887777777655 34443332 23444
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
-++. ++-|||.+||.+||+ ||++-|-
T Consensus 184 ~~~~----IhYGDSD~Di~AAke----aG~RgIR 209 (237)
T COG3700 184 KNIR----IHYGDSDNDITAAKE----AGARGIR 209 (237)
T ss_pred cCce----EEecCCchhhhHHHh----cCcccee
Confidence 5555 899999999999998 6665543
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.066 Score=55.97 Aligned_cols=93 Identities=12% Similarity=0.112 Sum_probs=64.1
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-------------------CCcHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------------GPKVNVL 195 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-------------------~pkp~~l 195 (263)
-+|-|++.+.++ +.|+++.++|.-....+..+-++ .||..- +.+.|.+- +-.|+-=
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 367899999999 89999999999999999999996 999621 23333220 0123322
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.++.+.+.-..+.+.|+||+.||.-+=++ |++ |+.-|
T Consensus 592 ~~iV~~lq~~G~vVam~GDGvNDapALk~----AdV---GIAmg 628 (867)
T TIGR01524 592 SRIIGLLKKAGHTVGFLGDGINDAPALRK----ADV---GISVD 628 (867)
T ss_pred HHHHHHHHhCCCEEEEECCCcccHHHHHh----CCE---EEEeC
Confidence 22222332234568899999999999887 775 44445
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.0074 Score=49.46 Aligned_cols=79 Identities=16% Similarity=0.088 Sum_probs=56.4
Q ss_pred CCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCC-CCCCceEEcCCCC---CcHHHHHHHHhhCCCCCCcEEEE
Q 024758 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG---PKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 139 ~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl-~~~f~~v~G~~~~---pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
.+-||+.++|+ .+.+.++|.|+..+..++.+++. +.- ..+|+.++..+.- .+.. .+-++.+|-+.+++|+|
T Consensus 36 ~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~--~KdL~~l~~~~~~vviv 112 (159)
T PF03031_consen 36 KLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSY--IKDLSKLGRDLDNVVIV 112 (159)
T ss_dssp EE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEE--E--GGGSSS-GGGEEEE
T ss_pred eeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhcccccccccccccccccccc--ccchHHHhhccccEEEE
Confidence 56799999999 78899999999999999999996 776 4678888875421 1111 24566777788999999
Q ss_pred cCChhhHH
Q 024758 213 EDRLATLK 220 (263)
Q Consensus 213 GDs~~Di~ 220 (263)
.|++.-..
T Consensus 113 DD~~~~~~ 120 (159)
T PF03031_consen 113 DDSPRKWA 120 (159)
T ss_dssp ES-GGGGT
T ss_pred eCCHHHee
Confidence 99988653
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.057 Score=55.57 Aligned_cols=86 Identities=9% Similarity=0.074 Sum_probs=60.5
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC---ce-----------------------EEcCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DR-----------------------LYGLGT 188 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f---~~-----------------------v~G~~~ 188 (263)
-+|-|++.+.++ +.|+++.++|.-....++.+-++ .||.... +. |++.
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr-- 517 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAE-- 517 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe--
Confidence 378899999999 89999999999999999999996 9996410 00 2221
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
-.|+-=.++.+.+.-...-+.|+||..||.-+=++ |.|
T Consensus 518 -~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~----AdV 555 (755)
T TIGR01647 518 -VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKK----ADV 555 (755)
T ss_pred -cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHh----CCe
Confidence 12322222233333334568999999999998876 665
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.11 Score=54.71 Aligned_cols=93 Identities=12% Similarity=0.102 Sum_probs=64.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-C------------------CCcHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T------------------GPKVNVL 195 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~------------------~pkp~~l 195 (263)
-+|-|++.+.++ ++|+++.++|.-....+..+-++ .||..- ..+-|.+ . +-.|+-=
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~-~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPG-EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCC-CccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 368899999999 89999999999999999999996 999521 2222222 0 0133322
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.++.+.+.-..+-+.|+||..||.-|=++ |.| |+.-|
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~----ADV---GIAmg 663 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGINDAPALRD----ADV---GISVD 663 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchhHHHHHh----CCE---EEEeC
Confidence 22333333334568999999999998886 675 44445
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.26 Score=48.13 Aligned_cols=65 Identities=12% Similarity=0.120 Sum_probs=42.8
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC
Q 024758 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (263)
Q Consensus 109 ~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~ 187 (263)
|+..+++++.-.++...|.. + . +-|..-+...++| +.+|+|.-++..++..++.++|. |.|+|.+
T Consensus 75 Gl~~~die~vaRavlpkf~~---~----d--v~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTE 139 (498)
T PLN02499 75 GVHESEIESVARAVLPKFYM---D----D--VDMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSE 139 (498)
T ss_pred CCCHHHHHHHHHHHhhHHHH---h----h--CCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeee
Confidence 67777666665555555422 1 1 2233444444666 99999999999999999975776 5666653
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.13 Score=55.00 Aligned_cols=98 Identities=7% Similarity=-0.044 Sum_probs=65.5
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC----------CceEE-cCCC----------------
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT----------PDRLY-GLGT---------------- 188 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~----------f~~v~-G~~~---------------- 188 (263)
+|-|++.++++ ++|+++.++|.-....+..+-++ .||... -..++ |.+-
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 78899999999 89999999999999999999996 999532 11222 2110
Q ss_pred ---CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 189 ---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 189 ---~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
.-.|+-=.++.+.+.-..+.+.|+||+.||.-+=++ |+| |+.-|.+..+
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~----AdV---GIAmg~~gt~ 776 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKM----ANV---GIAMGINGSD 776 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHh----CCc---cEecCCCccH
Confidence 012322222222232234568899999999998876 675 5555644343
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.11 Score=54.45 Aligned_cols=93 Identities=13% Similarity=0.098 Sum_probs=63.6
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-------------------CCcHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------------GPKVNVL 195 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-------------------~pkp~~l 195 (263)
-+|-|++.+.++ ++|+++.++|.-....+..+-++ .||.. -..+.|.+- +-.|+-=
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~-~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDA-GEVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCc-cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 367899999999 89999999999999999999996 99952 122223220 0123322
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.++.+.+.-...-+.|+||..||.-|=++ |.| |+.-|
T Consensus 627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~----ADV---GIAmg 663 (902)
T PRK10517 627 ERIVTLLKREGHVVGFMGDGINDAPALRA----ADI---GISVD 663 (902)
T ss_pred HHHHHHHHHCCCEEEEECCCcchHHHHHh----CCE---EEEeC
Confidence 22222332234557899999999998887 664 55556
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.18 Score=53.14 Aligned_cols=89 Identities=17% Similarity=0.141 Sum_probs=63.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc-----------------------eEEcCCCC-Cc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD-----------------------RLYGLGTG-PK 191 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~-----------------------~v~G~~~~-pk 191 (263)
+|-|++.+.++ ++|+++.++|.-....+..+-++ .||...-. .|++.-+. .|
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 78899999999 89999999999999999999996 99963211 23322211 23
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 192 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
-+++.. +++. ..-+.|+||+.||.-|=++ |.| |+.-|
T Consensus 658 ~~iV~~-lq~~---g~vVam~GDGvNDapALk~----AdV---GIAmg 694 (941)
T TIGR01517 658 QLLVLM-LKDM---GEVVAVTGDGTNDAPALKL----ADV---GFSMG 694 (941)
T ss_pred HHHHHH-HHHC---CCEEEEECCCCchHHHHHh----CCc---ceecC
Confidence 344444 3332 3468999999999999886 664 45556
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.021 Score=45.83 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=13.0
Q ss_pred CcEEEEecCcccccC
Q 024758 2 EDLYALDFDGVICDS 16 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (263)
-|+|+||+||||++.
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 079999999999975
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.56 Score=41.81 Aligned_cols=102 Identities=15% Similarity=0.113 Sum_probs=76.2
Q ss_pred CCCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc--eEEcCCCC-CcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~--~v~G~~~~-pkp~~l~~~l~~l~~~~~~ 208 (263)
-.|+|.+.++++ +.|+.+.-+++.+...++++.+ +|-+-... ..+|+..+ .+|+.+..+.+..+++
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~--~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~vp--- 177 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADVP--- 177 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCCc---
Confidence 468999999999 5799888677788888888887 67764333 45565544 5799999888775554
Q ss_pred EEEEc---CChhhHHHhhccCcCCCCcEEEEcCCCCC---hHHHHhh
Q 024758 209 LHFVE---DRLATLKNVIKEPELDGWNLYLGNLFRFL---CHILLLY 249 (263)
Q Consensus 209 ~l~VG---Ds~~Di~aA~~~~~~Agi~~v~v~wGy~~---~~~l~~~ 249 (263)
+++| .+..|+..|.+ .|.+.|.|.++... +....++
T Consensus 178 -VI~egGI~tpeda~~Ame----lGAdgVlV~SAIt~a~dP~~ma~a 219 (248)
T cd04728 178 -VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAKAKDPVAMARA 219 (248)
T ss_pred -EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhcCCCCHHHHHHH
Confidence 6776 35778888876 89999999999987 4444433
|
ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH). |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.049 Score=43.35 Aligned_cols=14 Identities=14% Similarity=0.422 Sum_probs=13.2
Q ss_pred cEEEEecCcccccC
Q 024758 3 DLYALDFDGVICDS 16 (263)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (263)
|+++|||||||.+.
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 68999999999998
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.18 Score=49.24 Aligned_cols=75 Identities=17% Similarity=0.293 Sum_probs=57.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
.++.|++.++++ +.|+++.++|......+..+-++ .|+ ++.-. .-|.+.+..+. -....+.|||
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~----~~g~~v~~vG 413 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQ----KKGRVVAMTG 413 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHH----HCCCEEEEEC
Confidence 478999999999 88999999999999999999996 886 22211 13445555542 2236789999
Q ss_pred CChhhHHHhhc
Q 024758 214 DRLATLKNVIK 224 (263)
Q Consensus 214 Ds~~Di~aA~~ 224 (263)
|..+|..+-++
T Consensus 414 Dg~nD~~al~~ 424 (499)
T TIGR01494 414 DGVNDAPALKK 424 (499)
T ss_pred CChhhHHHHHh
Confidence 99999988775
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.28 Score=52.18 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=35.3
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
+|-|++.+.++ ++|+++.++|+-....+..+.++ .|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 67899999999 89999999999999999999996 9984
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.049 Score=46.63 Aligned_cols=53 Identities=11% Similarity=-0.103 Sum_probs=42.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|+++++++.|||+.+|+.+-+. +|.. ++| | +..++++..+
T Consensus 186 sK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~----~~~~-~am--~-na~~~~k~~a 238 (254)
T PF08282_consen 186 SKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLEL----AGYS-VAM--G-NATPELKKAA 238 (254)
T ss_dssp SHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHH----SSEE-EEE--T-TS-HHHHHHS
T ss_pred CHHHHHHHHhhhcccccceeEEeecccccHhHHhh----cCeE-EEE--c-CCCHHHHHhC
Confidence 78999999999999999999999999999999987 6653 445 4 3345565443
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.23 Score=51.43 Aligned_cols=88 Identities=14% Similarity=0.146 Sum_probs=66.3
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
.+-||+..++. +.|++++++|+-....++.+-++ .| ++.|+..-.. .|.+.+.++.++- ..+.||||
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~~----~~VaMVGD 793 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKNG----GPVAMVGD 793 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhcC----CcEEEEeC
Confidence 56788888777 89999999999999999999997 88 5677775432 5778888876643 55799999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
..||--+=.+ |. ||+.=|-++
T Consensus 794 GINDaPALA~----Ad---VGIaig~gs 814 (951)
T KOG0207|consen 794 GINDAPALAQ----AD---VGIAIGAGS 814 (951)
T ss_pred CCCccHHHHh----hc---cceeecccc
Confidence 9999765432 33 455556553
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.34 Score=43.16 Aligned_cols=81 Identities=15% Similarity=0.211 Sum_probs=56.3
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHH----HHHHHHHhhCCCCCC--ceEEcCCCCCcHHHHHHHHhhCCCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF----VETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~----a~~iL~~~~gl~~~f--~~v~G~~~~pkp~~l~~~l~~l~~~~~ 207 (263)
.+++-||+.|+|+ ++|..+.-+||..++. +..-|++ +||..-- ..+.=.+.++|..-...+-+.+.
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~---- 194 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDYK---- 194 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhccc----
Confidence 4689999999999 8999999999988776 6666775 8885321 12222333366655555554333
Q ss_pred cEEEEcCChhhHHHh
Q 024758 208 RLHFVEDRLATLKNV 222 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA 222 (263)
=+++|||+..|....
T Consensus 195 iVm~vGDNl~DF~d~ 209 (274)
T COG2503 195 IVMLVGDNLDDFGDN 209 (274)
T ss_pred eeeEecCchhhhcch
Confidence 368999999997543
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.55 Score=42.51 Aligned_cols=50 Identities=36% Similarity=0.569 Sum_probs=36.6
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHH---HHHhhCCCCCCceEEcC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGL 186 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~i---L~~~~gl~~~f~~v~G~ 186 (263)
..++|||+.+.|+ ++|+++.++||++....+.+ |+.+.|++-..+.|+.+
T Consensus 22 G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS 77 (269)
T COG0647 22 GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS 77 (269)
T ss_pred CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH
Confidence 3589999999999 89999999999877655533 33224555556777764
|
|
| >PRK00208 thiG thiazole synthase; Reviewed | Back alignment and domain information |
|---|
Probab=93.03 E-value=3.1 Score=37.21 Aligned_cols=102 Identities=15% Similarity=0.112 Sum_probs=75.1
Q ss_pred CCCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc--eEEcCCCC-CcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~--~v~G~~~~-pkp~~l~~~l~~l~~~~~~ 208 (263)
-.++|.+.++++ +.|+.+.-+++.+...++++.+ +|-+.... ..+|+..+ .+|+.+..+.+..+++
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~--~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~vp--- 177 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEE--AGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADVP--- 177 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCCe---
Confidence 457999999999 5699888567777788888877 67764333 55665544 5799988888766554
Q ss_pred EEEEcC---ChhhHHHhhccCcCCCCcEEEEcCCCCC---hHHHHhh
Q 024758 209 LHFVED---RLATLKNVIKEPELDGWNLYLGNLFRFL---CHILLLY 249 (263)
Q Consensus 209 ~l~VGD---s~~Di~aA~~~~~~Agi~~v~v~wGy~~---~~~l~~~ 249 (263)
+++|= +..|+..|.+ .|.+.|.|.+|... +....++
T Consensus 178 -VIveaGI~tpeda~~Ame----lGAdgVlV~SAItka~dP~~ma~a 219 (250)
T PRK00208 178 -VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAVAGDPVAMARA 219 (250)
T ss_pred -EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhhCCCCHHHHHHH
Confidence 77764 4677777776 89999999999987 4544433
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.64 Score=41.12 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=74.9
Q ss_pred HHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhC-------CCCCCceEEcCCCCCcHHHH
Q 024758 126 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVL 195 (263)
Q Consensus 126 y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~g-------l~~~f~~v~G~~~~pkp~~l 195 (263)
|.+-|..+-+. ...||.|...++ ..|++++|-|+-+...-+.+.. |-+ ++.|||.-+|.- -....+
T Consensus 111 w~~gy~sg~lk-~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg-~s~~gdl~~y~~gyfDt~iG~K--~e~~sy 186 (254)
T KOG2630|consen 111 WAAGYESGELK-AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFG-YSDAGDLRKYISGYFDTTIGLK--VESQSY 186 (254)
T ss_pred HHhhccccccc-ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHc-ccCcchHHHHhhhhhhccccce--ehhHHH
Confidence 55555544443 479999999999 8999999998877665554444 232 234566555421 345788
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
.++.+.+|.++.+.+|.=|-..-..+|+. +|+.+..+
T Consensus 187 ~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~----aGl~a~l~ 223 (254)
T KOG2630|consen 187 KKIGHLIGKSPREILFLTDVPREAAAARK----AGLQAGLV 223 (254)
T ss_pred HHHHHHhCCChhheEEeccChHHHHHHHh----cccceeee
Confidence 99999999999999999999999999987 77766544
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.056 Score=45.86 Aligned_cols=14 Identities=36% Similarity=0.627 Sum_probs=12.3
Q ss_pred EEEEecCcccccCH
Q 024758 4 LYALDFDGVICDSC 17 (263)
Q Consensus 4 ~vlFDlDGTLvDS~ 17 (263)
+++||+||||+++-
T Consensus 1 li~~D~DgTL~~~~ 14 (204)
T TIGR01484 1 LLFFDLDGTLLDPN 14 (204)
T ss_pred CEEEeCcCCCcCCC
Confidence 58999999999875
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.067 Score=45.21 Aligned_cols=15 Identities=40% Similarity=0.543 Sum_probs=13.7
Q ss_pred CcEEEEecCcccccC
Q 024758 2 EDLYALDFDGVICDS 16 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (263)
.|+|+||+||||+|+
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 489999999999996
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=92.19 E-value=0.095 Score=48.35 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=21.3
Q ss_pred EEEEecCcccccCHHHHHHHHHHHHHHh
Q 024758 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~di~~s~~~~~~~~ 31 (263)
+++||+||||+++..- ...+..+++.+
T Consensus 2 ~~ifD~DGvL~~g~~~-i~ga~eal~~L 28 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKP-IAGASDALRRL 28 (321)
T ss_pred EEEEeCcCceECCccc-cHHHHHHHHHH
Confidence 6899999999999887 55555666666
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.077 Score=43.04 Aligned_cols=16 Identities=38% Similarity=0.397 Sum_probs=14.3
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
++++||+||||.++-.
T Consensus 1 ~~~~~d~dgtl~~~~~ 16 (147)
T TIGR01656 1 PALFLDRDGVINEDTV 16 (147)
T ss_pred CeEEEeCCCceeccCC
Confidence 5799999999999875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=92.03 E-value=0.29 Score=43.70 Aligned_cols=46 Identities=26% Similarity=0.137 Sum_probs=38.6
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G 185 (263)
..+|++.++|+ ++|++++|+|+++...+..++++ +|+..++-..-|
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~i~~nG 69 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPFIVENG 69 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCEEEEcC
Confidence 56788999998 89999999999999999999996 999766543334
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.064 Score=43.84 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.3
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
|+++|||||||+.+..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999999865
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=91.92 E-value=0.099 Score=47.88 Aligned_cols=30 Identities=10% Similarity=0.093 Sum_probs=20.5
Q ss_pred CcEEEEecCcccccCHHHH---HHHHHHHHHHh
Q 024758 2 EDLYALDFDGVICDSCEET---ALSAVKAARVR 31 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di---~~s~~~~~~~~ 31 (263)
.++|+|||||||++.-..+ -..+..+++++
T Consensus 126 ~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~L 158 (301)
T TIGR01684 126 PHVVVFDLDSTLITDEEPVRIRDPRIYDSLTEL 158 (301)
T ss_pred ceEEEEecCCCCcCCCCccccCCHHHHHHHHHH
Confidence 3799999999999986543 23444444444
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.096 Score=43.74 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=14.0
Q ss_pred CcEEEEecCcccccCH
Q 024758 2 EDLYALDFDGVICDSC 17 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (263)
.|+++||+||||+++-
T Consensus 13 ~k~~~~D~Dgtl~~~~ 28 (166)
T TIGR01664 13 SKVAAFDLDGTLITTR 28 (166)
T ss_pred CcEEEEeCCCceEecC
Confidence 4899999999999864
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=91.52 E-value=0.079 Score=40.48 Aligned_cols=16 Identities=31% Similarity=0.426 Sum_probs=13.7
Q ss_pred EEEEecCcccccCHHH
Q 024758 4 LYALDFDGVICDSCEE 19 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~d 19 (263)
+++||+||||+++-+.
T Consensus 1 ~~vfD~D~tl~~~~~~ 16 (139)
T cd01427 1 AVLFDLDGTLLDSEPG 16 (139)
T ss_pred CeEEccCCceEccCcc
Confidence 4899999999998763
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=91.35 E-value=0.12 Score=47.46 Aligned_cols=19 Identities=16% Similarity=0.303 Sum_probs=16.1
Q ss_pred CcEEEEecCcccccCHHHH
Q 024758 2 EDLYALDFDGVICDSCEET 20 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di 20 (263)
.++|+||+||||+++-..+
T Consensus 128 ~~~i~~D~D~TL~~~~~~v 146 (303)
T PHA03398 128 PHVIVFDLDSTLITDEEPV 146 (303)
T ss_pred ccEEEEecCCCccCCCCcc
Confidence 4899999999999995544
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.38 Score=42.60 Aligned_cols=48 Identities=13% Similarity=0.163 Sum_probs=40.6
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcC---CchHHHHHHHHHhhCCCCCCceEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGL 186 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~Tn---K~~~~a~~iL~~~~gl~~~f~~v~G~ 186 (263)
..++||+.+.|+ ++|++++++|| ++.......|++ +|++...+.|+++
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~-~g~~~~~~~iit~ 69 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS-FDIPATLETVFTA 69 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEeeH
Confidence 467899999998 89999999998 667788888886 9998777778865
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.1 Score=42.81 Aligned_cols=14 Identities=50% Similarity=0.805 Sum_probs=12.8
Q ss_pred cEEEEecCcccccC
Q 024758 3 DLYALDFDGVICDS 16 (263)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (263)
|+|+||+||||+|.
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 2 RLLILDVDGVLTDG 15 (154)
T ss_pred eEEEEeCceeEEcC
Confidence 79999999999974
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=90.82 E-value=0.47 Score=42.04 Aligned_cols=38 Identities=13% Similarity=0.390 Sum_probs=33.4
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCC
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV 176 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl 176 (263)
.++-||+.++++ ++-++-.|+|+.-+..++++.+ +.|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~-~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTAS-MIGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHH-hcCC
Confidence 478999999999 7777889999999999999998 5887
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.61 E-value=2.7 Score=37.30 Aligned_cols=48 Identities=21% Similarity=0.275 Sum_probs=36.2
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH--hhCCCCCCceEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE--LAGVTITPDRLYGL 186 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~--~~gl~~~f~~v~G~ 186 (263)
+++||+.+.|+ ++|+++.++||.+....+.+.++ .+|+.--.+.|+++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence 68999999998 88999999999888766555553 15775445666653
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=89.89 E-value=6.3 Score=34.47 Aligned_cols=71 Identities=23% Similarity=0.359 Sum_probs=44.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~---~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
..+|||+.+.|+ ++|+++.++||.+ .......|.+++|+.--++.|+.+ ...+...+++.+ +...++.
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits-----~~~~~~~l~~~~-~~~~v~v 86 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS-----GSVTKDLLRQRF-EGEKVYV 86 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH-----HHHHHHHHHHhC-CCCEEEE
Confidence 468999999998 7899999999654 443434444346776555666643 223334444322 2345777
Q ss_pred EcC
Q 024758 212 VED 214 (263)
Q Consensus 212 VGD 214 (263)
+|.
T Consensus 87 ~G~ 89 (236)
T TIGR01460 87 IGV 89 (236)
T ss_pred ECC
Confidence 885
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.61 E-value=1.5 Score=46.35 Aligned_cols=90 Identities=10% Similarity=0.189 Sum_probs=64.4
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc--eEE-cCC-CC------------------CcH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-GLG-TG------------------PKV 192 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~--~v~-G~~-~~------------------pkp 192 (263)
-+|-|+++++++ ++|+++.++|.-....|..+-++ .|+..--+ .++ |.+ .. -.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 478899999999 89999999999999999999996 99865432 244 543 10 124
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 193 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 193 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
+-=.++.+.+.-...-+.|+||..||+-|=|+ |.|-
T Consensus 625 ~qK~~IV~~lq~~g~vVamtGDGvNDapALk~----ADVG 660 (917)
T COG0474 625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKA----ADVG 660 (917)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCchhHHHHHh----cCcc
Confidence 32222333333334558899999999999887 7753
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=89.61 E-value=0.17 Score=41.96 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=12.1
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
|+++||+||||+-+..
T Consensus 1 Kia~fD~DgTLi~~~s 16 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS 16 (159)
T ss_dssp SEEEE-SCTTTEE-ST
T ss_pred CEEEEeCCCCccCCCC
Confidence 6789999999998754
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.25 E-value=0.22 Score=44.71 Aligned_cols=35 Identities=17% Similarity=0.180 Sum_probs=31.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
.|...+.++++.+|+..+++++|||..+|+.+=+.
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~ 208 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAV 208 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHH
Confidence 78899999999999999999999999999887654
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=89.18 E-value=0.37 Score=42.92 Aligned_cols=46 Identities=26% Similarity=0.381 Sum_probs=35.5
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCCCceEEc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYG 185 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~iL~~~~gl~~~f~~v~G 185 (263)
.++||+.+.|+ ++|++++++||++... ....|+. +|++.-.+.|+.
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~t 72 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFT 72 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEc
Confidence 38999999999 7999999999976664 5566675 888655556665
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=89.03 E-value=3.9 Score=36.57 Aligned_cols=85 Identities=20% Similarity=0.193 Sum_probs=52.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC--------------C----CCCcHHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL--------------G----TGPKVNVLK 196 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~--------------~----~~pkp~~l~ 196 (263)
..+-+|+.++++ ++++|+.|.|.--...++.+|++ .|....=-.|++. + +..|-+...
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q-~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ-AGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH-TT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH-cCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 467899999998 89999999999999999999997 6653222223321 1 013333222
Q ss_pred H---HHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 197 Q---LQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 197 ~---~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
. -.+++ -...+++..|||..|+.+|.-
T Consensus 168 ~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G 197 (246)
T PF05822_consen 168 EDSPYFKQL-KKRTNVLLLGDSLGDLHMADG 197 (246)
T ss_dssp TTHHHHHCT-TT--EEEEEESSSGGGGTTTT
T ss_pred cCchHHHHh-ccCCcEEEecCccCChHhhcC
Confidence 1 11222 246789999999999999864
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=88.58 E-value=2.7 Score=45.10 Aligned_cols=39 Identities=15% Similarity=0.326 Sum_probs=34.4
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
-+|-|||.++++ ++|+++.++|+-..+.|..+-.+ .|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 378899999999 89999999999999999999875 7773
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=88.46 E-value=2.6 Score=45.21 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=36.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
.++-|++.+.++ ++|+++.++|+-....+..+-++ .||-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 478999999999 89999999999999999999996 9994
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=88.06 E-value=2.2 Score=41.74 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=59.3
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC--------CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHH
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 221 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~--------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~a 221 (263)
++|+-++|+|-+...-++.+..+ + -+.|.-.+. .||.+-++++++++|+..+..+||.|++.-.+-
T Consensus 269 kqGVlLav~SKN~~~da~evF~k-h-----p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~ 342 (574)
T COG3882 269 KQGVLLAVCSKNTEKDAKEVFRK-H-----PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAEREL 342 (574)
T ss_pred hccEEEEEecCCchhhHHHHHhh-C-----CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHH
Confidence 89999999999999999888875 2 345665431 299999999999999999999999999999999
Q ss_pred hhc
Q 024758 222 VIK 224 (263)
Q Consensus 222 A~~ 224 (263)
-|+
T Consensus 343 vk~ 345 (574)
T COG3882 343 VKR 345 (574)
T ss_pred HHh
Confidence 987
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=87.97 E-value=0.29 Score=41.27 Aligned_cols=17 Identities=18% Similarity=0.215 Sum_probs=12.0
Q ss_pred CcEEEEecCcccccCHH
Q 024758 2 EDLYALDFDGVICDSCE 18 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~ 18 (263)
+|+|+||||+||-+---
T Consensus 3 PklvvFDLD~TlW~~~~ 19 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWM 19 (169)
T ss_dssp -SEEEE-STTTSSSS-T
T ss_pred CcEEEEcCcCCCCchhH
Confidence 58999999999976433
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=87.97 E-value=3 Score=35.95 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=58.6
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCC----CceEEcCC---------CC---CcHHHHHHHHhhCC
Q 024758 142 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTIT----PDRLYGLG---------TG---PKVNVLKQLQKKPE 203 (263)
Q Consensus 142 pGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~----f~~v~G~~---------~~---pkp~~l~~~l~~l~ 203 (263)
||+.+.|+ .+.+.++|-|+.....++.+++. +|+... +..+.... .+ -|+ +..+-++++
T Consensus 48 P~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd--L~~lw~~l~ 124 (195)
T TIGR02245 48 PYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP--LGVIWALLP 124 (195)
T ss_pred CCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEee--cHHhhhhcc
Confidence 99999999 78999999999999999999995 876321 11222211 11 122 222223444
Q ss_pred --CCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 204 --HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 204 --~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.+..++|+|.|++.-...-=. +|+.+- .|-
T Consensus 125 ~~~~~~ntiiVDd~p~~~~~~P~----N~i~I~--~f~ 156 (195)
T TIGR02245 125 EFYSMKNTIMFDDLRRNFLMNPQ----NGLKIR--PFK 156 (195)
T ss_pred cCCCcccEEEEeCCHHHHhcCCC----CccccC--Ccc
Confidence 267899999999887653222 577764 554
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.87 E-value=0.26 Score=43.45 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=21.4
Q ss_pred HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHH
Q 024758 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQL 198 (263)
Q Consensus 164 ~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~ 198 (263)
..++.++++ +++..-.-..+| |+..+.+++..+
T Consensus 170 ~a~~~~~~~-~~~~~~~~i~iG-D~~~D~~~~~~~ 202 (244)
T TIGR00685 170 EIVKRLLWH-QPGSGISPVYLG-DDITDEDAFRVV 202 (244)
T ss_pred HHHHHHHHh-cccCCCceEEEc-CCCcHHHHHHHH
Confidence 667788885 887654444445 444677777765
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=86.33 E-value=0.34 Score=40.73 Aligned_cols=49 Identities=16% Similarity=0.111 Sum_probs=27.7
Q ss_pred HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHh
Q 024758 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 222 (263)
Q Consensus 164 ~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA 222 (263)
...+.++++ +|+..--...+|.. ..+-+ +++..|++ +.++++..++..+
T Consensus 85 ~~~~~~~~~-l~~~~~ev~~iGD~-~nDi~----~~~~ag~~----~am~nA~~~lk~~ 133 (169)
T TIGR02726 85 EPYAQMLEE-MNISDAEVCYVGDD-LVDLS----MMKRVGLA----VAVGDAVADVKEA 133 (169)
T ss_pred HHHHHHHHH-cCcCHHHEEEECCC-HHHHH----HHHHCCCe----EECcCchHHHHHh
Confidence 456677775 88764323344533 23323 34445655 7788888877654
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.17 E-value=1.9 Score=42.46 Aligned_cols=78 Identities=13% Similarity=0.168 Sum_probs=59.3
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 215 (263)
...||++|-.. +-|++...+|.-.+-.+..+-++ -|+++|... .+||-=.+++++.+....=+-|.||.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiAe-------atPEdK~~~I~~eQ~~grlVAMtGDG 518 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIAE-------ATPEDKLALIRQEQAEGRLVAMTGDG 518 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhhc-------CChHHHHHHHHHHHhcCcEEEEcCCC
Confidence 35799999887 89999999999999999999996 999876532 34554444455555455557899999
Q ss_pred hhhHHHhhc
Q 024758 216 LATLKNVIK 224 (263)
Q Consensus 216 ~~Di~aA~~ 224 (263)
.||.-+-.+
T Consensus 519 TNDAPALAq 527 (681)
T COG2216 519 TNDAPALAQ 527 (681)
T ss_pred CCcchhhhh
Confidence 999866543
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=85.12 E-value=0.47 Score=36.24 Aligned_cols=19 Identities=26% Similarity=0.525 Sum_probs=13.7
Q ss_pred EEEecCcccccCHHHHHHH
Q 024758 5 YALDFDGVICDSCEETALS 23 (263)
Q Consensus 5 vlFDlDGTLvDS~~di~~s 23 (263)
++||+||||.+.-..|-.|
T Consensus 1 ~l~D~dGvl~~g~~~ipga 19 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGA 19 (101)
T ss_dssp EEEESTTTSEETTEE-TTH
T ss_pred CEEeCccEeEeCCCcCcCH
Confidence 6899999999865544433
|
... |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=85.12 E-value=0.52 Score=38.31 Aligned_cols=16 Identities=25% Similarity=0.401 Sum_probs=14.3
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
..+++||||||++|..
T Consensus 3 ~~lvldld~tl~~~~~ 18 (148)
T smart00577 3 KTLVLDLDETLVHSTH 18 (148)
T ss_pred cEEEEeCCCCeECCCC
Confidence 5799999999999865
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.10 E-value=2.5 Score=37.89 Aligned_cols=46 Identities=9% Similarity=-0.042 Sum_probs=25.9
Q ss_pred HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024758 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (263)
Q Consensus 164 ~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 215 (263)
..++.++++ +|+..-.-..+| |...+-+++..+- +++ .-.+-||.+
T Consensus 177 ~al~~ll~~-~~~~~~~v~~~G-D~~nD~~mf~~~~-~~~---g~~vavg~a 222 (266)
T PRK10187 177 EAIAAFMQE-APFAGRTPVFVG-DDLTDEAGFAVVN-RLG---GISVKVGTG 222 (266)
T ss_pred HHHHHHHHh-cCCCCCeEEEEc-CCccHHHHHHHHH-hcC---CeEEEECCC
Confidence 456778884 888644333344 4445666776653 222 234677755
|
|
| >PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional | Back alignment and domain information |
|---|
Probab=84.74 E-value=15 Score=34.25 Aligned_cols=121 Identities=16% Similarity=0.144 Sum_probs=84.6
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhcccc------CCCCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCC-
Q 024758 111 NREALIELSGKVRDEWMDTDFTTWIG------ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVT- 177 (263)
Q Consensus 111 ~~~~~~~~~~~~r~~y~~~~~~~~~~------~~~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~- 177 (263)
+.+++-....-.|+.+ ..+|.+ .-.++|.+.++++ +.|+.+.++++.+...++++.+ +|-.
T Consensus 148 ta~eAv~~a~lare~~----~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~--~g~~a 221 (326)
T PRK11840 148 TAEEAVRTLRLAREAG----GWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED--AGAVA 221 (326)
T ss_pred CHHHHHHHHHHHHHhc----CCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh--cCCEE
Confidence 4444444445455543 234432 2458999999999 5799998888888888888877 5652
Q ss_pred -CCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC---ChhhHHHhhccCcCCCCcEEEEcCCCCChHH
Q 024758 178 -ITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED---RLATLKNVIKEPELDGWNLYLGNLFRFLCHI 245 (263)
Q Consensus 178 -~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD---s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~ 245 (263)
......+|+..+ .+|+.+..+.+...++ ++||= +..|+..|-+ .|.+-++++-|--....
T Consensus 222 vmPl~~pIGsg~gv~~p~~i~~~~e~~~vp----VivdAGIg~~sda~~Ame----lGadgVL~nSaIa~a~d 286 (326)
T PRK11840 222 VMPLGAPIGSGLGIQNPYTIRLIVEGATVP----VLVDAGVGTASDAAVAME----LGCDGVLMNTAIAEAKN 286 (326)
T ss_pred EeeccccccCCCCCCCHHHHHHHHHcCCCc----EEEeCCCCCHHHHHHHHH----cCCCEEEEcceeccCCC
Confidence 122445565544 7999999999986665 77774 4678888877 89999999998754433
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=84.17 E-value=2.7 Score=37.84 Aligned_cols=78 Identities=21% Similarity=0.083 Sum_probs=52.4
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEE--cCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCc
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY--GLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~--G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 227 (263)
..-++++|||..+...-+++++.+..|.-..|..+ |+- +|..++.. ++ |. ||+.|....++.|.
T Consensus 184 ~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLgG~--~K~~vL~~----~~--ph--IFFDDQ~~H~~~a~---- 249 (264)
T PF06189_consen 184 NSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLGGL--PKGPVLKA----FR--PH--IFFDDQDGHLESAS---- 249 (264)
T ss_pred CCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhCCC--chhHHHHh----hC--CC--EeecCchhhhhHhh----
Confidence 35589999998776666666654333443444333 222 45554433 22 33 99999999999997
Q ss_pred CCCCcEEEEcCCCCC
Q 024758 228 LDGWNLYLGNLFRFL 242 (263)
Q Consensus 228 ~Agi~~v~v~wGy~~ 242 (263)
.+++++-|.||-.+
T Consensus 250 -~~vps~hVP~gv~n 263 (264)
T PF06189_consen 250 -KVVPSGHVPYGVAN 263 (264)
T ss_pred -cCCCEEeccCCcCC
Confidence 59999999999654
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.76 E-value=4.2 Score=42.25 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=69.2
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc----eEE-cCC--C-----------------CCc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----RLY-GLG--T-----------------GPK 191 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~----~v~-G~~--~-----------------~pk 191 (263)
+|-|+|.+.++ +.|+++-++|.-....|+.|-++ .|+...-+ ..+ |++ . +-.
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 67899999998 99999999999999999999996 99865544 222 222 0 012
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 192 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
|..=.++.+.|+...+=+-|-||..||.-+-|. |.| |+.-|-..-+
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~----AdI---GIAMG~~GTd 708 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKK----ADI---GIAMGISGTD 708 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhh----ccc---ceeecCCccH
Confidence 433334444444455557899999999999887 664 6666744333
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=82.92 E-value=14 Score=33.17 Aligned_cols=81 Identities=11% Similarity=0.131 Sum_probs=59.8
Q ss_pred CcEEEEcCCchHHHHHHHHHhhCCCCCC--ceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCC
Q 024758 153 SRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 153 ~~laI~TnK~~~~a~~iL~~~~gl~~~f--~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
+.+.|-|+.--+.+-+.|= +||+.+| +-|+++....|...++.+.+++|-+...-+.|||..---++|+. -+
T Consensus 177 vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~----l~ 250 (274)
T TIGR01658 177 INVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQA----MN 250 (274)
T ss_pred eEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHh----cC
Confidence 4444444444455555553 6777665 55666544489999999999999988999999999999899987 89
Q ss_pred CcEEEEcCC
Q 024758 231 WNLYLGNLF 239 (263)
Q Consensus 231 i~~v~v~wG 239 (263)
++++=+.-.
T Consensus 251 wPFw~I~~h 259 (274)
T TIGR01658 251 WPFVKIDLH 259 (274)
T ss_pred CCeEEeecC
Confidence 999877544
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=82.90 E-value=0.65 Score=40.03 Aligned_cols=15 Identities=33% Similarity=0.430 Sum_probs=13.5
Q ss_pred cEEEEecCcccccCH
Q 024758 3 DLYALDFDGVICDSC 17 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (263)
+++++||||||+|+.
T Consensus 22 klLVLDLDeTLvh~~ 36 (195)
T TIGR02245 22 KLLVLDIDYTLFDHR 36 (195)
T ss_pred cEEEEeCCCceEccc
Confidence 799999999999864
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >CHL00162 thiG thiamin biosynthesis protein G; Validated | Back alignment and domain information |
|---|
Probab=82.75 E-value=18 Score=32.59 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=75.6
Q ss_pred CCCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCC--CCceEEcCCCC-CcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~~--~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~ 208 (263)
-.++|...|+|+ +.|+.+.--||-+...++++.+ .|-.- ..-.-+|+..+ .+|..+..+++...++
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLed--~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~vp--- 191 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLED--IGCATVMPLGSPIGSGQGLQNLLNLQIIIENAKIP--- 191 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--cCCeEEeeccCcccCCCCCCCHHHHHHHHHcCCCc---
Confidence 468999999999 8999999999999999999887 56531 12223454455 7899999999887776
Q ss_pred EEEEcC---ChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 209 LHFVED---RLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 209 ~l~VGD---s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
++||= +..|+..|-+ .|.+-|+++-|--...
T Consensus 192 -VivdAGIgt~sDa~~AmE----lGaDgVL~nSaIakA~ 225 (267)
T CHL00162 192 -VIIDAGIGTPSEASQAME----LGASGVLLNTAVAQAK 225 (267)
T ss_pred -EEEeCCcCCHHHHHHHHH----cCCCEEeecceeecCC
Confidence 77764 5678888877 8999999999875433
|
|
| >COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=82.61 E-value=4.9 Score=36.68 Aligned_cols=81 Identities=17% Similarity=0.108 Sum_probs=62.6
Q ss_pred EEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 155 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 155 laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
++-+|.+.++.++.+... ..+ -.|+|+..-.+..-+.++.++.|. .++.| |+..||.... ..|+.+|
T Consensus 195 ICyAT~nRQ~Avk~la~~-~Dl----~iVVG~~nSSNs~rL~eiA~~~g~---~aylI-d~~~ei~~~w----~~~~~~V 261 (294)
T COG0761 195 ICYATQNRQDAVKELAPE-VDL----VIVVGSKNSSNSNRLAEIAKRHGK---PAYLI-DDAEEIDPEW----LKGVKTV 261 (294)
T ss_pred cchhhhhHHHHHHHHhhc-CCE----EEEECCCCCccHHHHHHHHHHhCC---CeEEe-CChHhCCHHH----hcCccEE
Confidence 788899999988888774 332 357786544667778888888887 34777 6678887664 5899999
Q ss_pred EEcCCCCChHHHHh
Q 024758 235 LGNLFRFLCHILLL 248 (263)
Q Consensus 235 ~v~wGy~~~~~l~~ 248 (263)
|||=|-..++.+.+
T Consensus 262 GvTAGAStPd~lV~ 275 (294)
T COG0761 262 GVTAGASTPDWLVQ 275 (294)
T ss_pred EEecCCCCCHHHHH
Confidence 99999999999864
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=82.50 E-value=0.68 Score=38.58 Aligned_cols=13 Identities=38% Similarity=0.296 Sum_probs=11.7
Q ss_pred cEEEEecCccccc
Q 024758 3 DLYALDFDGVICD 15 (263)
Q Consensus 3 ~~vlFDlDGTLvD 15 (263)
|+++||+||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 6899999999985
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=82.26 E-value=2.6 Score=36.01 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=31.0
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
.|-..++|+ ++|++++|+|+++...++.+++. +|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 344677777 89999999999999999999995 9986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=82.19 E-value=2.7 Score=36.65 Aligned_cols=40 Identities=23% Similarity=0.053 Sum_probs=34.5
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~ 179 (263)
...|+..+.|+ ++|+++.++|+++...+..++++ +|+..+
T Consensus 15 ~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~~ 57 (225)
T TIGR02461 15 YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEPP 57 (225)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCc
Confidence 45678889988 78999999999999999999996 998643
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.03 E-value=0.75 Score=38.40 Aligned_cols=17 Identities=41% Similarity=0.528 Sum_probs=14.9
Q ss_pred CCcEEEEecCcccccCH
Q 024758 1 MEDLYALDFDGVICDSC 17 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~ 17 (263)
|.|+++||.||||.|..
T Consensus 7 ~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 7 NIKLLILDVDGVLTDGK 23 (170)
T ss_pred hceEEEEeccceeecCe
Confidence 45899999999999974
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.99 E-value=2.9 Score=39.84 Aligned_cols=84 Identities=13% Similarity=0.137 Sum_probs=62.0
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhC--CCCCCceEEcCCCC----------------------------------CcHH
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG----------------------------------PKVN 193 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~g--l~~~f~~v~G~~~~----------------------------------pkp~ 193 (263)
+.|.++.++||-.-.++..++++++| |..||+.|+-...+ +.+-
T Consensus 212 ~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~~ySgg 291 (424)
T KOG2469|consen 212 DSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGGVYSGG 291 (424)
T ss_pred hhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcccCCcc
Confidence 89999999999999999999997665 77889888753100 1224
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChh-hHHHhhccCcCCCCcEEEE
Q 024758 194 VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 194 ~l~~~l~~l~~~~~~~l~VGDs~~-Di~aA~~~~~~Agi~~v~v 236 (263)
....+++.+++...+++||||... ||..-++ .-|.+++.|
T Consensus 292 s~~~~~~~l~~~g~diLy~gdHi~~dvl~skk---~~~wrt~lv 332 (424)
T KOG2469|consen 292 SLKTVETSMKVKGKDILYGGDHIWGDVLVSKK---RRGWRTVLV 332 (424)
T ss_pred hHHHHHHHhcccccceeecccceeeeEEecce---ecceEEEEE
Confidence 555666667777789999999874 6655553 367777766
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=80.37 E-value=2.9 Score=38.41 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=34.5
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~ 179 (263)
..++-+.+.|+ ++|++++++|+|....+..+.+. +|+..+
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl~~p 60 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQ-LRLEHP 60 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCCCCe
Confidence 45677888887 89999999999999999999996 998753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 263 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 7e-05
Identities = 55/305 (18%), Positives = 86/305 (28%), Gaps = 117/305 (38%)
Query: 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETG 61
ED + +FD C ++ S + + D I+ +G
Sbjct: 26 EDAFVDNFD---CKDVQDMPKSILSKEEI--------------DHIIMS-----KDAVSG 63
Query: 62 YDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILE---NWLKIKPVIMEEWSENREALIEL 118
TL L LL ++ + + VE +L +L M
Sbjct: 64 --TLRLFWTLLS------KQEEMVQKF-VEEVLRINYKFL------MSPIKT-------- 100
Query: 119 SGKVRDEWMDTD-FTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVT 177
+ R M T + +RLY K SR+ + +E LR V
Sbjct: 101 --EQRQPSMMTRMYIEQR--DRLYNDNQVFAKYNVSRLQPYLKLRQALLE--LRPAKNVL 154
Query: 178 ITPDRLYG-LGTGPKV-------------------------------NVLKQLQK----- 200
+ G LG+G VL+ LQK
Sbjct: 155 -----IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209
Query: 201 ------KPEHQG---LRLHFVEDRLATLKNVIKEPE-------LDG-WNLYLGNLFRFLC 243
+ +H LR+H ++ L + ++K L N N F C
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAEL---RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC 266
Query: 244 HILLL 248
ILL
Sbjct: 267 KILLT 271
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 263 | |||
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 100.0 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.98 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.97 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.97 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.96 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.96 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.96 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.96 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.96 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.96 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.96 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.96 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.96 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.95 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.95 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.95 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.95 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.95 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.95 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.95 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.94 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.94 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.94 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.94 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.94 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.94 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.94 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.94 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.94 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.94 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.94 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.93 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.93 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.93 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.93 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.93 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.93 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.93 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.93 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.93 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.93 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.93 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.93 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.92 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.92 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.92 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.92 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.92 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.92 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.92 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.92 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.91 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.91 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.91 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.91 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.9 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.9 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.89 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.89 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.89 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.89 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.87 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.86 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.86 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.86 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.86 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.84 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.83 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.83 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.82 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.82 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.82 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.82 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.81 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.81 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.81 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.8 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.8 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.78 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.78 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.63 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.76 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.76 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.76 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.74 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.74 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.72 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.7 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.7 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.7 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.7 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.7 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.69 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.69 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.69 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.68 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.68 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.68 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.67 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.67 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.67 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.66 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.66 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.65 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.6 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.59 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.57 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.55 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.54 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.54 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.53 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.52 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.5 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.47 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.46 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.44 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.41 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.41 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.39 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.36 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.3 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.29 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.29 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.27 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.27 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.22 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.13 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.12 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.11 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.09 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.07 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.03 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.98 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.89 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.8 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.76 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.73 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.71 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.67 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.61 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.47 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.35 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.3 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 98.14 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.88 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 97.68 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.58 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.55 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.48 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.44 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.26 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.25 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 96.46 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.32 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.19 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 96.05 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.04 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 95.8 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.76 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 95.42 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 95.09 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 94.72 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 94.25 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 93.83 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 93.38 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 93.38 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 93.27 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 93.08 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 92.9 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 92.81 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 91.72 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 91.24 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 91.15 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 90.87 | |
| 1wv2_A | 265 | Thiazole moeity, thiazole biosynthesis protein THI | 88.55 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 88.35 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 88.28 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 85.57 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 84.88 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 84.71 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 84.43 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 83.44 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 81.33 |
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=238.45 Aligned_cols=197 Identities=16% Similarity=0.113 Sum_probs=149.2
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.|+|+|||||||+||.+.+..+.+.+++++ |++... .+.++.++|.+....+ ..+
T Consensus 4 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~--~~~---------- 58 (210)
T 2ah5_A 4 ITAIFFDLDGTLVDSSIGIHNAFTYTFKEL------GVPSPD-------AKTIRGFMGPPLESSF--ATC---------- 58 (210)
T ss_dssp CCEEEECSBTTTEECHHHHHHHHHHHHHHH------TCCCCC-------HHHHHHTSSSCHHHHH--HTT----------
T ss_pred CCEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCCCC-------HHHHHHHcCccHHHHH--HHH----------
Confidence 489999999999999999999999999999 443211 2346667776643322 100
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEEEc
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVT 159 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI~T 159 (263)
++.+..++..+.+++.|.. ......++|||+.++|+ ++|++++|+|
T Consensus 59 ----------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~L~~~~~l~i~T 106 (210)
T 2ah5_A 59 ----------------------------LSKDQISEAVQIYRSYYKA----KGIYEAQLFPQIIDLLEELSSSYPLYITT 106 (210)
T ss_dssp ----------------------------SCGGGHHHHHHHHHHHHHH----TGGGSCEECTTHHHHHHHHHTTSCEEEEE
T ss_pred ----------------------------cCHHHHHHHHHHHHHHHHH----hccCCCCCCCCHHHHHHHHHcCCeEEEEe
Confidence 0001112233334444433 22334679999999999 3399999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCceEEcCC--CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 160 SNQSRFVETLLRELAGVTITPDRLYGLG--TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 160 nK~~~~a~~iL~~~~gl~~~f~~v~G~~--~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
|+++..++.+|++ +|+..+|+.|++++ .+|||++++.+++++|++|++|+|||||.+|+++|++ ||+++|+|.
T Consensus 107 ~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~----aG~~~i~v~ 181 (210)
T 2ah5_A 107 TKDTSTAQDMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARE----TGIQKLAIT 181 (210)
T ss_dssp EEEHHHHHHHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEEEEES
T ss_pred CCCHHHHHHHHHh-cCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHH----CCCcEEEEc
Confidence 9999999999995 99999999999876 3499999999999999999999999999999999998 999999999
Q ss_pred CCCCChHHHHhhhhHhHHHhhhcc
Q 024758 238 LFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 238 wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
||++..+++.+ ..|..++.++++
T Consensus 182 ~~~~~~~~l~~-~~a~~v~~~~~e 204 (210)
T 2ah5_A 182 WGFGEQADLLN-YQPDYIAHKPLE 204 (210)
T ss_dssp SSSSCHHHHHT-TCCSEEESSTTH
T ss_pred CCCCCHHHHHh-CCCCEEECCHHH
Confidence 99987777652 345555555544
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=232.38 Aligned_cols=188 Identities=16% Similarity=0.099 Sum_probs=143.0
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
|+|+|||||||+||.+.+..+.+.+++++ |++.. .+..+.+.|....... +...+..
T Consensus 2 kAViFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~------- 58 (216)
T 3kbb_A 2 EAVIFDMDGVLMDTEPLYFEAYRRVAESY------GKPYT--------EDLHRRIMGVPEREGL--PILMEAL------- 58 (216)
T ss_dssp CEEEEESBTTTBCCGGGHHHHHHHHHHHT------TCCCC--------HHHHHHHTTSCHHHHH--HHHHHHT-------
T ss_pred eEEEECCCCcccCCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHhccchhhhh--hhhhhcc-------
Confidence 89999999999999999999999999999 44321 2345666666544332 1111100
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEc
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (263)
.. ....+ +....+.+.+... +....+++||+.++|+ ++|++++|+|
T Consensus 59 ----~~--------------------~~~~~---~~~~~~~~~~~~~----~~~~~~~~pg~~~~l~~L~~~g~~~~i~t 107 (216)
T 3kbb_A 59 ----EI--------------------KDSLE---NFKKRVHEEKKRV----FSELLKENPGVREALEFVKSKRIKLALAT 107 (216)
T ss_dssp ----TC--------------------CSCHH---HHHHHHHHHHHHH----HHHHCCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred ----cc--------------------hhhHH---HHHHHHHHHHHHH----HHHhcccCccHHHHHHHHHHcCCCccccc
Confidence 00 00111 1112222332222 2234579999999999 8999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE-
Q 024758 160 SNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY- 234 (263)
Q Consensus 160 nK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v- 234 (263)
|+++..+...+++ +|+..|||.+++++ .||+|+++..+++++|++|++|+|||||.+|+++|++ +|+++|
T Consensus 108 n~~~~~~~~~l~~-~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~----aG~~~i~ 182 (216)
T 3kbb_A 108 STPQREALERLRR-LDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKS----AGIERIY 182 (216)
T ss_dssp SSCHHHHHHHHHH-TTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHH----TTCCCEE
T ss_pred CCcHHHHHHHHHh-cCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHH----cCCcEEE
Confidence 9999999999995 99999999999875 3599999999999999999999999999999999998 999998
Q ss_pred EEcCCCCChHHHHhh
Q 024758 235 LGNLFRFLCHILLLY 249 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~ 249 (263)
+|+||+++.+++.+.
T Consensus 183 ~v~~g~~~~~~l~~~ 197 (216)
T 3kbb_A 183 GVVHSLNDGKALLEA 197 (216)
T ss_dssp EECCSSSCCHHHHHT
T ss_pred EecCCCCCHHHHHhC
Confidence 699999999988753
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.9e-32 Score=234.13 Aligned_cols=221 Identities=13% Similarity=0.082 Sum_probs=158.1
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCC-cchhhhhhhhhhccccccccchHHHHHHHHHhhcccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVD-SALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~-~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~ 79 (263)
|.|+|+|||||||+||.+.+..+.+.+++++ |++ ... .+.++.++|.+....+. +.+....
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~------g~~~~~~-------~~~~~~~~g~~~~~~~~-~~~~~~~---- 64 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQT------GHRHDFT-------VEDIKNFFGSGVVVAVT-RALAYEA---- 64 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TSCCCCC-------HHHHHHHCSSCHHHHHH-HHHHHHT----
T ss_pred cccEEEEecCCCCccCHHHHHHHHHHHHHHc------CCCCCCC-------HHHHHHhcCccHHHHHH-HHHHhcc----
Confidence 4699999999999999999999999999998 443 221 24567788887655431 2221000
Q ss_pred cccccccCcchHHHHHhhhhhhhhHHh-hhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcE
Q 024758 80 RKSSVAEGLTVEGILENWLKIKPVIME-EWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (263)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (263)
....... ..+. ..+.. ..+++++..++....+++.|.. ......++|||+.++|+ ++|+++
T Consensus 65 -------~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~l~~~g~~~ 129 (240)
T 2hi0_A 65 -------GSSRESL-VAFG---TKDEQIPEAVTQTEVNRVLEVFKPYYAD----HCQIKTGPFPGILDLMKNLRQKGVKL 129 (240)
T ss_dssp -------TCCHHHH-TTTT---STTCCCCTTCCHHHHHHHHHHHHHHHHH----TSSSSCEECTTHHHHHHHHHHTTCEE
T ss_pred -------ccccccc-cccc---ccccccCCCCCHHHHHHHHHHHHHHHHH----hhhhcCCcCCCHHHHHHHHHHCCCEE
Confidence 0011110 0000 00000 0123444455555555555543 33345689999999998 789999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 156 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
+|+||+++..++.+|++ +|+. +|+.+++++ .+|||+++..+++++|++|++|+||||+.+|+++|++ ||+
T Consensus 130 ~i~t~~~~~~~~~~l~~-~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~----aG~ 203 (240)
T 2hi0_A 130 AVVSNKPNEAVQVLVEE-LFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARN----SEM 203 (240)
T ss_dssp EEEEEEEHHHHHHHHHH-HSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----TTC
T ss_pred EEEeCCCHHHHHHHHHH-cCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHH----CCC
Confidence 99999999999999995 9999 999999864 3499999999999999999999999999999999997 999
Q ss_pred cEEEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 232 NLYLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 232 ~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
.+|+|.||++..+++.+ ..|..++.++++
T Consensus 204 ~~v~v~~~~~~~~~~~~-~~a~~~~~~~~e 232 (240)
T 2hi0_A 204 DEIAVNWGFRSVPFLQK-HGATVIVDTAEK 232 (240)
T ss_dssp EEEEESSSSSCHHHHHH-TTCCCEECSHHH
T ss_pred eEEEECCCCCchhHHHh-cCCCEEECCHHH
Confidence 99999999988777653 334445555443
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=230.58 Aligned_cols=195 Identities=15% Similarity=0.072 Sum_probs=140.7
Q ss_pred CC-cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccc
Q 024758 1 ME-DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (263)
Q Consensus 1 m~-~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~ 79 (263)
|. |+|+|||||||+||.+.+..+.+.+++++ |++.. .+..+.+.|.+....+ .+.+.. .
T Consensus 3 MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~-~---- 62 (243)
T 4g9b_A 3 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEI------GISID--------AQFNESLKGISRDESL-RRILQH-G---- 62 (243)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCC--------TTGGGGGTTCCHHHHH-HHHHHH-T----
T ss_pred ccCcEEEEcCCCcccCCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHcCCCHHHHH-HHHHHH-h----
Confidence 65 99999999999999999999999999999 44311 2356667777765543 122211 0
Q ss_pred cccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEE
Q 024758 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~la 156 (263)
+... ........+........|...... .....++||+.++|+ ++|++++
T Consensus 63 -------~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~ll~~L~~~g~~i~ 115 (243)
T 4g9b_A 63 -------GKEG------------------DFNSQERAQLAYRKNLLYVHSLRE--LTVNAVLPGIRSLLADLRAQQISVG 115 (243)
T ss_dssp -------TCGG------------------GCCHHHHHHHHHHHHHHHHHHHHT--CCGGGBCTTHHHHHHHHHHTTCEEE
T ss_pred -------hccc------------------chhHHHHHHHHHHHHHHHHHHHHh--cccccccccHHHHHHhhhcccccce
Confidence 0000 001111111111111122221111 223478999999999 8999999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
|+||+.. +..+|++ +|+..+|+.|++++ .||+|++++.+++++|++|++|+|||||.+||++|++ ||++
T Consensus 116 i~t~~~~--~~~~l~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~----aG~~ 188 (243)
T 4g9b_A 116 LASVSLN--APTILAA-LELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINA----SGMR 188 (243)
T ss_dssp ECCCCTT--HHHHHHH-TTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHH----HTCE
T ss_pred ecccccc--hhhhhhh-hhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHH----cCCE
Confidence 9999865 4678995 99999999999865 3599999999999999999999999999999999998 9999
Q ss_pred EEEEcCCCCChHHHHhh
Q 024758 233 LYLGNLFRFLCHILLLY 249 (263)
Q Consensus 233 ~v~v~wGy~~~~~l~~~ 249 (263)
+|+|+||+...+.+...
T Consensus 189 ~I~V~~g~~~ad~~~~~ 205 (243)
T 4g9b_A 189 SVGIGAGLTGAQLLLPS 205 (243)
T ss_dssp EEEESTTCCSCSEEESS
T ss_pred EEEECCCCCcHHHhcCC
Confidence 99999999877655433
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=218.61 Aligned_cols=200 Identities=16% Similarity=0.137 Sum_probs=156.0
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+||.+.+..+.+.+++++ |.+.. ..+.++.++|.+....+. ..
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~-------~~~~~~~~~g~~~~~~~~-~~---------- 58 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKF------DIQVE-------DLSSLNKFVGPPLKTSFM-EY---------- 58 (226)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHHHHHTT------TCCCS-------CGGGGGGGSSSCHHHHHH-HH----------
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHHHHHHc------CCCCC-------CHHHHHHHhCcCHHHHHH-HH----------
Confidence 5699999999999999999999999999998 44321 124667777776544321 11
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
++++.+........+++.|. +.......++||+.++|+ ++|++++|
T Consensus 59 ---------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~~~i 107 (226)
T 3mc1_A 59 ---------------------------YNFDEETATVAIDYYRDYFK----AKGMFENKVYDGIEALLSSLKDYGFHLVV 107 (226)
T ss_dssp ---------------------------HCCCHHHHHHHHHHHHHHHT----TTGGGSCCBCTTHHHHHHHHHHHTCEEEE
T ss_pred ---------------------------hCCCHHHHHHHHHHHHHHHH----HhCcccCccCcCHHHHHHHHHHCCCeEEE
Confidence 12333334444444555443 333445789999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||++...++.++++ +|+..+|+.+++++ .+|||+.+..+++++|++|++++||||+.+|+++|++ ||+++
T Consensus 108 ~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~----aG~~~ 182 (226)
T 3mc1_A 108 ATSKPTVFSKQILEH-FKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALK----NNLPS 182 (226)
T ss_dssp EEEEEHHHHHHHHHH-TTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHT----TTCCE
T ss_pred EeCCCHHHHHHHHHH-hCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHH----CCCCE
Confidence 999999999999996 99999999999865 2499999999999999999999999999999999997 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
|+|.||++..+++. ...|..+..++++
T Consensus 183 i~v~~g~~~~~~~~-~~~ad~v~~s~~e 209 (226)
T 3mc1_A 183 IGVTYGFGSYEELK-NAGANYIVNSVDE 209 (226)
T ss_dssp EEESSSSSCHHHHH-HHTCSEEESSHHH
T ss_pred EEEccCCCCHHHHH-HcCCCEEECCHHH
Confidence 99999999888774 2345555555544
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-30 Score=219.88 Aligned_cols=182 Identities=15% Similarity=0.159 Sum_probs=142.0
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+||.+.+..+.+.+++++ |++.. ..+.++.++|.+....+. +.+..
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~-------~~~~~~~~~g~~~~~~~~-~~~~~------- 60 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEKTLKEL------GLEEY-------YPDNVTKYIGGGVRALLE-KVLKD------- 60 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHHHHHHT------TCGGG-------CCSCGGGGCSSCHHHHHH-HHHGG-------
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHHHHHHc------CCCCC-------CHHHHHHHhCcCHHHHHH-HHhCh-------
Confidence 3689999999999999999999999999998 44321 124567778877654431 22110
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
... ++....+++.|. ..+....++|||+.++|+ ++|++++|
T Consensus 61 -------~~~-------------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~~~i 104 (222)
T 2nyv_A 61 -------KFR-------------------------EEYVEVFRKHYL----ENPVVYTKPYPEIPYTLEALKSKGFKLAV 104 (222)
T ss_dssp -------GCC-------------------------THHHHHHHHHHH----HCSCSSCEECTTHHHHHHHHHHTTCEEEE
T ss_pred -------HHH-------------------------HHHHHHHHHHHH----HhccccCccCCCHHHHHHHHHHCCCeEEE
Confidence 000 011222333333 233445689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||++...++.++++ +|+..+|+.+++++ .+|||+++..+++++|++|++++||||+.+|+.+|++ +|+.+
T Consensus 105 ~s~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~----aG~~~ 179 (222)
T 2nyv_A 105 VSNKLEELSKKILDI-LNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKR----AGTKT 179 (222)
T ss_dssp ECSSCHHHHHHHHHH-TTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred EcCCCHHHHHHHHHH-cCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHH----CCCeE
Confidence 999999999999996 99999999999865 3599999999999999999999999999999999997 99999
Q ss_pred EEEcCCCCChH
Q 024758 234 YLGNLFRFLCH 244 (263)
Q Consensus 234 v~v~wGy~~~~ 244 (263)
|+|.||++..+
T Consensus 180 i~v~~g~~~~~ 190 (222)
T 2nyv_A 180 ALALWGYVKLN 190 (222)
T ss_dssp EEETTSSCSCC
T ss_pred EEEcCCCCCcc
Confidence 99999987654
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=219.06 Aligned_cols=201 Identities=17% Similarity=0.142 Sum_probs=140.0
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+||.+.+..+.+.+++++ |++.. .+..+.+.|.+....+ .+.+..
T Consensus 25 MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~------- 82 (250)
T 4gib_A 25 MIEAFIFDLDGVITDTAYYHYMAWRKLAHKV------GIDID--------TKFNESLKGISRMESL-DRILEF------- 82 (250)
T ss_dssp CCCEEEECTBTTTBCCHHHHHHHHHHHHHTT------TCCCC--------TTGGGGTTTCCHHHHH-HHHHHH-------
T ss_pred hhheeeecCCCcccCCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHhCcchHHHH-HHhhhh-------
Confidence 7899999999999999999999999999998 44311 1344555665543322 111110
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
....+.++++...+..+...+.|...... .....++||+.++|+ ++|+++++
T Consensus 83 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~ll~~Lk~~g~~i~i 137 (250)
T 4gib_A 83 -----------------------GNKKYSFSEEEKVRMAEEKNNYYVSLIDE--ITSNDILPGIESLLIDVKSNNIKIGL 137 (250)
T ss_dssp -----------------------TTCTTTSCHHHHHHHHHHHHHHHHHHHTT--CCGGGSCTTHHHHHHHHHHTTCEEEE
T ss_pred -----------------------hcCCCCCCHHHHHHHHHHHHHHHHHHHhh--ccccccchhHHHHHHHHHhccccccc
Confidence 00011122222223333333444332221 233578999999998 89999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+|++.. +..+|++ +|+..||+.|++++ .||+|++++.+++++|++|++|+|||||.+|+++|++ ||+++
T Consensus 138 ~~~~~~--~~~~L~~-~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~----aG~~~ 210 (250)
T 4gib_A 138 SSASKN--AINVLNH-LGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINS----ANMFS 210 (250)
T ss_dssp CCSCTT--HHHHHHH-HTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----TTCEE
T ss_pred ccccch--hhhHhhh-cccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHH----cCCEE
Confidence 888754 5678995 99999999999875 3599999999999999999999999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|+|.. .+.+. .|.-+.+++++|
T Consensus 211 i~v~~----~~~~~---~ad~vi~~l~eL 232 (250)
T 4gib_A 211 VGVGN----YENLK---KANLVVDSTNQL 232 (250)
T ss_dssp EEESC----TTTTT---TSSEEESSGGGC
T ss_pred EEECC----hhHhc---cCCEEECChHhC
Confidence 99953 22232 244455555554
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=215.10 Aligned_cols=200 Identities=15% Similarity=0.102 Sum_probs=152.2
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.|+|+|||||||+|+...+..+.+.+++++++ .. ..+.++.+.|.+....+ +.+...
T Consensus 19 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~-------~~-------~~~~~~~~~g~~~~~~~--~~~~~~------- 75 (237)
T 4ex6_A 19 DRGVILDLDGTLADTPAAIATITAEVLAAMGT-------AV-------SRGAILSTVGRPLPASL--AGLLGV------- 75 (237)
T ss_dssp CEEEEECSBTTTBCCHHHHHHHHHHHHHHTTC-------CC-------CHHHHHHHTTSCHHHHH--HHHHTS-------
T ss_pred CCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCC-------CC-------CHHHHHHhcCccHHHHH--HHHhCC-------
Confidence 58999999999999999999999999999841 11 12456667777765543 222110
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccc--cCCCCcccHHHHHH---hCCCcEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWI--GANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~--~~~~lypGv~e~L~---~~g~~la 156 (263)
. .+++........+++.|.+. +. ....+|||+.++|+ ++|++++
T Consensus 76 -----~----------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~~~ 124 (237)
T 4ex6_A 76 -----P----------------------VEDPRVAEATEEYGRRFGAH----VRAAGPRLLYPGVLEGLDRLSAAGFRLA 124 (237)
T ss_dssp -----C----------------------TTSHHHHHHHHHHHHHHHHH----HHHHGGGGBCTTHHHHHHHHHHTTEEEE
T ss_pred -----C----------------------CCHHHHHHHHHHHHHHHHHh----cccccCCccCCCHHHHHHHHHhCCCcEE
Confidence 0 01122223333344444332 22 34679999999999 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
|+||++...++.++++ +|+..+|+.+++++ .+|||+.+..+++++|++|++|+||||+.+|+++|++ +|++
T Consensus 125 i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~----aG~~ 199 (237)
T 4ex6_A 125 MATSKVEKAARAIAEL-TGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRA----AGMT 199 (237)
T ss_dssp EECSSCHHHHHHHHHH-HTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----TTCE
T ss_pred EEcCCChHHHHHHHHH-cCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHH----CCCe
Confidence 9999999999999995 99999999999876 2499999999999999999999999999999999998 9999
Q ss_pred EEEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 233 LYLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 233 ~v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+|+|.||++..+++.+ ..|..+..++++
T Consensus 200 ~i~v~~g~~~~~~~~~-~~ad~v~~~~~e 227 (237)
T 4ex6_A 200 VIGVSYGVSGPDELMR-AGADTVVDSFPA 227 (237)
T ss_dssp EEEESSSSSCHHHHHH-TTCSEEESSHHH
T ss_pred EEEEecCCCCHHHHHh-cCCCEEECCHHH
Confidence 9999999988887764 345545555443
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=218.26 Aligned_cols=210 Identities=17% Similarity=0.121 Sum_probs=154.8
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+||.+.+..+.+.+++++ |++... .+.++.++|.|....+. +.+...
T Consensus 22 ~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~~-~~~~~~------ 81 (243)
T 2hsz_A 22 QFKLIGFDLDGTLVNSLPDLALSINSALKDV------NLPQAS-------ENLVMTWIGNGADVLSQ-RAVDWA------ 81 (243)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TCCCCC-------HHHHHHHCSSCHHHHHH-HHHHHH------
T ss_pred cCCEEEEcCCCcCCCCHHHHHHHHHHHHHHc------CCCCCC-------HHHHHHHhCchHHHHHH-HHhhhh------
Confidence 5689999999999999999999999999998 444221 23566788888655431 222110
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
. ... ..+.+++.+++....+.+.|.. .+....++|||+.++|+ ++|++++|
T Consensus 82 -----------------~----~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~~~~i 135 (243)
T 2hsz_A 82 -----------------C----KQA-EKELTEDEFKYFKRQFGFYYGE----NLCNISRLYPNVKETLEALKAQGYILAV 135 (243)
T ss_dssp -----------------H----HHH-TCCCCHHHHHHHHHHHHHHHHH----HTTSSCEECTTHHHHHHHHHHTTCEEEE
T ss_pred -----------------h----ccc-cccCCHHHHHHHHHHHHHHHHH----hccccCccCCCHHHHHHHHHHCCCEEEE
Confidence 0 000 0012333333344444444433 33345689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||.+...++.++++ +|+..+|+.+++++ .+|+|+.+..+++++|+++++++||||+.+|+.+|++ +|+.+
T Consensus 136 ~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~----aG~~~ 210 (243)
T 2hsz_A 136 VTNKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHS----AGCAV 210 (243)
T ss_dssp ECSSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred EECCcHHHHHHHHHH-cCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHH----CCCeE
Confidence 999999999999996 99999999999865 3599999999999999999999999999999999997 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++|.||++....+. ...|..++.++.+|
T Consensus 211 i~v~~g~~~~~~~~-~~~ad~vi~~~~el 238 (243)
T 2hsz_A 211 VGLTYGYNYNIPIA-QSKPDWIFDDFADI 238 (243)
T ss_dssp EEESSSCSTTCCGG-GGCCSEEESSGGGG
T ss_pred EEEcCCCCchhhhh-hCCCCEEECCHHHH
Confidence 99999987654432 33455555555543
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-29 Score=210.59 Aligned_cols=203 Identities=15% Similarity=0.045 Sum_probs=154.3
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+|+.+.+..+...+++++ |++.. ...++.++|.+....+ +.+....
T Consensus 5 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~----- 63 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQNVAAWKEALDAE------NIPLA--------MWRIHRKIGMSGGLML--KSLSRET----- 63 (233)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHHHHT------TCCCC--------HHHHHHHTTSCHHHHH--HHHHHC------
T ss_pred cCcEEEEcCCCccccChHHHHHHHHHHHHHc------CCCCC--------HHHHHHHcCCcHHHHH--HHHHHhc-----
Confidence 4699999999999999999999999999998 44421 2345666676654432 1111100
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
+ ..++.+...+....+++.|... .....++||+.++|+ ++|++++|
T Consensus 64 ------~--------------------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~g~~~~i 112 (233)
T 3s6j_A 64 ------G--------------------MSITDEQAERLSEKHAQAYERL-----QHQIIALPGAVELLETLDKENLKWCI 112 (233)
T ss_dssp -----------------------------CCHHHHHHHHHHHHHHHHHT-----GGGCEECTTHHHHHHHHHHTTCCEEE
T ss_pred ------C--------------------CCCCHHHHHHHHHHHHHHHHHh-----hccCccCCCHHHHHHHHHHCCCeEEE
Confidence 0 0123333444444444544332 234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||.+...++.++++ +|+..+|+.+++++ .+|||+.+..+++++|++|++++||||+.+|+++|++ +|+++
T Consensus 113 ~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~----aG~~~ 187 (233)
T 3s6j_A 113 ATSGGIDTATINLKA-LKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARR----CKATG 187 (233)
T ss_dssp ECSSCHHHHHHHHHT-TTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----TTCEE
T ss_pred EeCCchhhHHHHHHh-cchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHH----CCCEE
Confidence 999999999999995 99999999999865 3499999999999999999999999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
|+|.||++..+++.+ ..|..+..++++
T Consensus 188 i~v~~g~~~~~~l~~-~~ad~v~~~~~e 214 (233)
T 3s6j_A 188 VGLLSGGYDIGELER-AGALRVYEDPLD 214 (233)
T ss_dssp EEEGGGSCCHHHHHH-TTCSEEESSHHH
T ss_pred EEEeCCCCchHhHHh-cCCCEEECCHHH
Confidence 999999998888774 445555555544
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-29 Score=213.17 Aligned_cols=200 Identities=16% Similarity=0.131 Sum_probs=157.4
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+|+-+.+..+.+.+++++ |.+ .. .+.++.+.|.+....+ +
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~------g~~-~~-------~~~~~~~~g~~~~~~~--~----------- 80 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSF------GIK-ED-------LENLDQFIGPPLHDTF--K----------- 80 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TCC-CC-------GGGGGGGSSSCHHHHH--H-----------
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHc------CCC-CC-------HHHHHHHhCccHHHHH--H-----------
Confidence 5699999999999999999999999999998 444 11 2466777776643322 1
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
..++++.+...+....+++.|.+ .......++||+.++|+ ++|++++|
T Consensus 81 -------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~~~~i 131 (240)
T 3sd7_A 81 -------------------------EYYKFEDKKAKEAVEKYREYFAD----KGIFENKIYENMKEILEMLYKNGKILLV 131 (240)
T ss_dssp -------------------------HTSCCCHHHHHHHHHHHHHHHHH----TGGGCCEECTTHHHHHHHHHHTTCEEEE
T ss_pred -------------------------HHhCCCHHHHHHHHHHHHHHHHH----hcccccccCccHHHHHHHHHHCCCeEEE
Confidence 11133444444555555555543 33445689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
+||.+...++.++++ +|+..+|+.+++++ .+|||+.+..+++++|++ |++++||||+.+|+++|++ +|++
T Consensus 132 ~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~----aG~~ 206 (240)
T 3sd7_A 132 ATSKPTVFAETILRY-FDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKK----IGID 206 (240)
T ss_dssp EEEEEHHHHHHHHHH-TTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHH----HTCE
T ss_pred EeCCcHHHHHHHHHH-cCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHH----CCCC
Confidence 999999999999996 99999999999865 249999999999999999 9999999999999999998 9999
Q ss_pred EEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 233 LYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 233 ~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+++|.||++..+++. ...|..++.+.++|
T Consensus 207 ~i~v~~g~~~~~~~~-~~~ad~v~~~~~el 235 (240)
T 3sd7_A 207 SIGVLYGYGSFEEIS-ESEPTYIVENVESI 235 (240)
T ss_dssp EEEESSSSCCHHHHH-HHCCSEEESSSTTH
T ss_pred EEEEeCCCCCHHHHh-hcCCCEEECCHHHH
Confidence 999999999888774 34555556655543
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=213.70 Aligned_cols=192 Identities=14% Similarity=0.052 Sum_probs=146.8
Q ss_pred CcEEEEecCcccccCHHHH-HHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEET-ALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di-~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+|||||||+||-..+ ..+++.+++++ |++.. ...++.++|.+....+. ..+ .
T Consensus 14 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~~~~~~~~~~-~~~-~------- 70 (277)
T 3iru_A 14 VEALILDWAGTTIDFGSLAPVYAFMELFKQE------GIEVT--------QAEAREPMGTEKSEHIR-RML-G------- 70 (277)
T ss_dssp CCEEEEESBTTTBSTTCCHHHHHHHHHHHTT------TCCCC--------HHHHHTTTTSCHHHHHH-HHT-T-------
T ss_pred CcEEEEcCCCCcccCCcccHHHHHHHHHHHh------CCCCC--------HHHHHHHhcCchHHHHH-Hhc-c-------
Confidence 5899999999999986644 67888888888 44421 24677888877655431 221 0
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhh--cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (263)
..... ..+...+ .++.+...+....+++.|.+.+ .....+|||+.++|+ ++|+++
T Consensus 71 ---------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~ 130 (277)
T 3iru_A 71 ---------NSRIA-------NAWLSIKGQASNEEDIKRLYDLFAPIQTRIV----AQRSQLIPGWKEVFDKLIAQGIKV 130 (277)
T ss_dssp ---------SHHHH-------HHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH----HHTCCBCTTHHHHHHHHHHTTCEE
T ss_pred ---------chHHH-------HHHHHHhccCCCHHHHHHHHHHHHHHHHHHh----hccCccCcCHHHHHHHHHHcCCeE
Confidence 01111 1112222 2355666666666666655433 344689999999998 789999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCC-CceEEcCC----CCCcHHHHHHHHhhCCCCC-CcEEEEcCChhhHHHhhccCcCC
Q 024758 156 YIVTSNQSRFVETLLRELAGVTIT-PDRLYGLG----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEPELD 229 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~~~-f~~v~G~~----~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~aA~~~~~~A 229 (263)
+|+||++...++.++++ +|+..+ |+.+++++ .+|||+.+..+++++|++| ++|+||||+.+|+++|++ +
T Consensus 131 ~i~tn~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~----a 205 (277)
T 3iru_A 131 GGNTGYGPGMMAPALIA-AKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLR----A 205 (277)
T ss_dssp EEECSSCHHHHHHHHHH-HHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHH----T
T ss_pred EEEeCCchHHHHHHHHh-cCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHH----C
Confidence 99999999999999995 999888 89999865 2499999999999999999 999999999999999998 9
Q ss_pred CCcEEEEcCCCC
Q 024758 230 GWNLYLGNLFRF 241 (263)
Q Consensus 230 gi~~v~v~wGy~ 241 (263)
|+.+|+|.||++
T Consensus 206 G~~~v~v~~g~~ 217 (277)
T 3iru_A 206 GMWTVGVSCSGN 217 (277)
T ss_dssp TCEEEEECSSST
T ss_pred CCeEEEEecCCc
Confidence 999999999986
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=207.24 Aligned_cols=201 Identities=10% Similarity=-0.026 Sum_probs=143.2
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHH-hCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARV-RWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~-~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~ 79 (263)
|.|+|+|||||||+||-+.+..+.+.++++ ++ .+.. ..++.+.|.+....+ ...+
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g------~~~~---------~~~~~~~g~~~~~~~-~~~~-------- 58 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYG------TEGS---------TGSHDFSGKMDGAII-YEVL-------- 58 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHS------CCCC---------C---CCTTCCHHHHH-HHHH--------
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHHhC------CCCc---------cchhhhcCCChHHHH-HHHH--------
Confidence 479999999999999999999999888888 53 2210 234566676654322 1111
Q ss_pred cccccccCcchHHHHHhhhhhhhhHHhhhcCC----HHHHHHHHHHHHHHHHhhhhhccc-cCCCCcccHHHHHH---hC
Q 024758 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSEN----REALIELSGKVRDEWMDTDFTTWI-GANRLYPGVSDALK---LA 151 (263)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~r~~y~~~~~~~~~-~~~~lypGv~e~L~---~~ 151 (263)
+.+|++ ++.+......+.+.|.+ .+. ....++||+.++|+ ++
T Consensus 59 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~ 108 (234)
T 2hcf_A 59 --------------------------SNVGLERAEIADKFDKAKETYIALFRE----RARREDITLLEGVRELLDALSSR 108 (234)
T ss_dssp --------------------------HTTTCCHHHHHHHHHHHHHHHHHHHHH----HCCGGGEEECTTHHHHHHHHHTC
T ss_pred --------------------------HHcCCCcccchhHHHHHHHHHHHHHHH----HhccCCCCcCCCHHHHHHHHHhC
Confidence 111221 11122233333333322 222 34578999999999 67
Q ss_pred -CCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-C--C--CcHHHHHHHHhhCC--CCCCcEEEEcCChhhHHHhh
Q 024758 152 -SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T--G--PKVNVLKQLQKKPE--HQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 152 -g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~--~--pkp~~l~~~l~~l~--~~~~~~l~VGDs~~Di~aA~ 223 (263)
|++++|+||++...++..+++ +|+..+|+.++.++ . + |+|+.+..+++++| ++|++|+||||+.+|+++|+
T Consensus 109 ~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~ 187 (234)
T 2hcf_A 109 SDVLLGLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCAR 187 (234)
T ss_dssp TTEEEEEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHH
T ss_pred CCceEEEEcCCcHHHHHHHHHH-CCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHH
Confidence 899999999999999999995 99999999766543 2 1 55788999999999 89999999999999999999
Q ss_pred ccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 224 KEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 224 ~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+ ||+.+++|.||+...+++.. ..|..+..++++
T Consensus 188 ~----aG~~~i~v~~~~~~~~~~~~-~~a~~v~~~~~e 220 (234)
T 2hcf_A 188 E----LDARSIAVATGNFTMEELAR-HKPGTLFKNFAE 220 (234)
T ss_dssp T----TTCEEEEECCSSSCHHHHHT-TCCSEEESCSCC
T ss_pred H----CCCcEEEEcCCCCCHHHHHh-CCCCEEeCCHHh
Confidence 7 99999999999988777653 334445555444
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=210.08 Aligned_cols=195 Identities=13% Similarity=0.063 Sum_probs=145.4
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+||.+.+..+.+.+++++ |.+.. .+.++.++|.+....+ +.+
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~--~~~--------- 57 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATY------GKPFS--------PAQAQKTFPMAAEQAM--TEL--------- 57 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTT------TCCCC--------HHHHHHHTTSCHHHHH--HHT---------
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHHHHHHh------CCCCC--------HHHHHHHcCCcHHHHH--HHc---------
Confidence 4699999999999999999999999999888 33211 2345666666543322 111
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
+++.+.+.+.+..+.+.+. . +.....++||+.++|+ ++ ++++|
T Consensus 58 ----------------------------~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~l~~l~~~-~~~~i 103 (209)
T 2hdo_A 58 ----------------------------GIAASEFDHFQAQYEDVMA----S-HYDQIELYPGITSLFEQLPSE-LRLGI 103 (209)
T ss_dssp ----------------------------TCCGGGHHHHHHHHHHHHT----T-CGGGCEECTTHHHHHHHSCTT-SEEEE
T ss_pred ----------------------------CCCHHHHHHHHHHHHHHHh----h-hcccCCcCCCHHHHHHHHHhc-CcEEE
Confidence 1111111122222222221 1 2244689999999999 56 99999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||++...++.++++ +|+..+|+.+++++ .||+|+.+..+++++|++|++++||||+.+|+.+|++ +|+.+
T Consensus 104 ~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~----aG~~~ 178 (209)
T 2hdo_A 104 VTSQRRNELESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQA----ANVDF 178 (209)
T ss_dssp ECSSCHHHHHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred EeCCCHHHHHHHHHH-cChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHH----cCCeE
Confidence 999999999999995 99999999999864 3588999999999999999999999999999999997 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+++.||++..+++.+ |..++.++++|
T Consensus 179 ~~~~~~~~~~~~~~~---a~~~~~~~~el 204 (209)
T 2hdo_A 179 GLAVWGMDPNADHQK---VAHRFQKPLDI 204 (209)
T ss_dssp EEEGGGCCTTGGGSC---CSEEESSGGGG
T ss_pred EEEcCCCCChhhhcc---CCEEeCCHHHH
Confidence 999999987766653 55555555543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-28 Score=206.78 Aligned_cols=200 Identities=15% Similarity=0.037 Sum_probs=149.8
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.|+|+|||||||+|+.+.+..+...+++++ |++.. ....+...|......+. ..+.
T Consensus 24 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~~-~~~~--------- 79 (243)
T 3qxg_A 24 LKAVLFDMDGVLFNSMPYHSEAWHQVMKTH------GLDLS--------REEAYMHEGRTGASTIN-IVFQ--------- 79 (243)
T ss_dssp CCEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCC--------HHHHHHTTTSCHHHHHH-HHHH---------
T ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHHHh------CCCCC--------HHHHHHHhCCCHHHHHH-HHHH---------
Confidence 599999999999999999999999999998 44321 12334444443322210 1110
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhh--cCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~la 156 (263)
+.+ .++++.+.+....+.+.|.. .....+|||+.++|+ ++|++++
T Consensus 80 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~l~~~g~~~~ 129 (243)
T 3qxg_A 80 ------------------------RELGKEATQEEIESIYHEKSILFNS------YPEAERMPGAWELLQKVKSEGLTPM 129 (243)
T ss_dssp ------------------------HHHSSCCCHHHHHHHHHHHHHHHHT------SSCCCBCTTHHHHHHHHHHTTCEEE
T ss_pred ------------------------HHhCCCCCHHHHHHHHHHHHHHHHh------cccCCCCCCHHHHHHHHHHcCCcEE
Confidence 001 12344444444544444322 134689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCC--ceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCC
Q 024758 157 IVTSNQSRFVETLLRELAGVTITP--DRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f--~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
|+||++...+...|+ . |+..+| +.+++++ .+|+|+.+..+++++|++|++|+||||+.+|+++|++ ||
T Consensus 130 i~t~~~~~~~~~~l~-~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~----aG 203 (243)
T 3qxg_A 130 VVTGSGQLSLLERLE-H-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHK----AG 203 (243)
T ss_dssp EECCCCCHHHHTTHH-H-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHH----TT
T ss_pred EEeCCcHHHHHHHHH-H-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH----CC
Confidence 999999999999999 6 999999 8899865 2499999999999999999999999999999999998 99
Q ss_pred CcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 231 WNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 231 i~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+.+|+|.||+...+++.+ .+|..++.++++|
T Consensus 204 ~~~i~v~~~~~~~~~l~~-~~ad~v~~s~~el 234 (243)
T 3qxg_A 204 IFTIAVNTGPLDGQVLLD-AGADLLFPSMQTL 234 (243)
T ss_dssp CEEEEECCSSSCHHHHHH-TTCSEEESCHHHH
T ss_pred CEEEEEeCCCCCHHHHHh-cCCCEEECCHHHH
Confidence 999999999988887763 4566566655543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.9e-28 Score=205.40 Aligned_cols=199 Identities=16% Similarity=0.035 Sum_probs=145.1
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.|+|+|||||||+||.+.+..+.+.+++++ |.+.. ....+...|......+. ..+.
T Consensus 23 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~~-~~~~--------- 78 (247)
T 3dv9_A 23 LKAVLFDMDGVLFDSMPNHAESWHKIMKRF------GFGLS--------REEAYMHEGRTGASTIN-IVSR--------- 78 (247)
T ss_dssp CCEEEEESBTTTBCCHHHHHHHHHHHHHHT------TCCCC--------HHHHHHTTTSCHHHHHH-HHHH---------
T ss_pred CCEEEECCCCccCcCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHhCCChHHHHH-HHHH---------
Confidence 589999999999999999999999999998 44321 12334444444322210 1110
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhc--CCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~la 156 (263)
+.++ ++++.+.+....+.+.|.. .....++||+.++|+ ++|++++
T Consensus 79 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~l~~~g~~~~ 128 (247)
T 3dv9_A 79 ------------------------RERGHDATEEEIKAIYQAKTEEFNK------CPKAERMPGALEVLTKIKSEGLTPM 128 (247)
T ss_dssp ------------------------HHHSSCCCHHHHHHHHHHHHHHHTT------SCCCCBCTTHHHHHHHHHHTTCEEE
T ss_pred ------------------------HhcCCCCCHHHHHHHHHHHHHHHHh------cccCCCCCCHHHHHHHHHHcCCcEE
Confidence 0011 2344444444444444322 134689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCC--ceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCC
Q 024758 157 IVTSNQSRFVETLLRELAGVTITP--DRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f--~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
|+||.+...+...|+ . |+..+| +.+++++ .+|+|+++..+++++|++|++|+||||+.+|+++|++ +|
T Consensus 129 i~t~~~~~~~~~~l~-~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~----aG 202 (247)
T 3dv9_A 129 VVTGSGQTSLLDRLN-H-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVA----AG 202 (247)
T ss_dssp EECSCC---CHHHHH-H-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHH----TT
T ss_pred EEcCCchHHHHHHHH-h-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHH----CC
Confidence 999999999999999 6 999999 8899865 3499999999999999999999999999999999998 99
Q ss_pred CcEEEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 231 WNLYLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 231 i~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+.+|+|.||+...+++.+ ..|..+..++++
T Consensus 203 ~~~i~v~~~~~~~~~l~~-~~ad~v~~~~~e 232 (247)
T 3dv9_A 203 IFTIAVNTGPLHDNVLLN-EGANLLFHSMPD 232 (247)
T ss_dssp SEEEEECCSSSCHHHHHT-TTCSEEESSHHH
T ss_pred CeEEEEcCCCCCHHHHHh-cCCCEEECCHHH
Confidence 999999999988887753 345545554443
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-28 Score=206.85 Aligned_cols=119 Identities=14% Similarity=0.038 Sum_probs=102.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .+|+|+++..+++++|++|++|+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i 171 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILR-LELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEAL 171 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHH-cCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 578999999999 78999999999999999999996 99999999999764 35999999999999999999999
Q ss_pred EEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 211 FVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 211 ~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
||||+. +|+.+|++ ||+.+++|.||++..+++.....|..++.++++
T Consensus 172 ~iGD~~~~Di~~a~~----aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~e 219 (241)
T 2hoq_A 172 MVGDRLYSDIYGAKR----VGMKTVWFRYGKHSERELEYRKYADYEIDNLES 219 (241)
T ss_dssp EEESCTTTTHHHHHH----TTCEEEEECCSCCCHHHHTTGGGCSEEESSTTH
T ss_pred EECCCchHhHHHHHH----CCCEEEEECCCCCCcccccccCCCCEEECCHHH
Confidence 999998 99999998 999999999999887766322244444444443
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=198.83 Aligned_cols=199 Identities=13% Similarity=0.034 Sum_probs=144.2
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+||...+..+.+.++++++ .+.. .+.++.+.|.+..... +.+....
T Consensus 4 m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~----- 62 (214)
T 3e58_A 4 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQKG------ISID--------HLPPSFFIGGNTKQVW--ENILRDE----- 62 (214)
T ss_dssp CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTT------CCCT--------TSCHHHHTTSCGGGCH--HHHHGGG-----
T ss_pred cccEEEEcCCCCccccHHHHHHHHHHHHHHcC------CCCC--------HHHHHHHcCCCHHHHH--HHHHHhh-----
Confidence 67999999999999999999999999999983 3211 2345555565543322 1111100
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccc-cCCCCcccHHHHHH---hCCCcEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWI-GANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~-~~~~lypGv~e~L~---~~g~~la 156 (263)
+. ....+ +....+++.+.+ ... ....++||+.++|+ ++|++++
T Consensus 63 ------~~--------------------~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~~~ 109 (214)
T 3e58_A 63 ------YD--------------------KWDVS---TLQEEYNTYKQN----NPLPYKELIFPDVLKVLNEVKSQGLEIG 109 (214)
T ss_dssp ------GG--------------------GSCHH---HHHHHHHHHHHH----SCCCHHHHBCTTHHHHHHHHHHTTCEEE
T ss_pred ------cC--------------------CCCHH---HHHHHHHHHHHH----hhcccCCCcCchHHHHHHHHHHCCCCEE
Confidence 00 01111 112222333322 111 12378999999999 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
|+||.+...++.++++ +|+..+|+.+++++ .+|+|+.+..+++++|++|++++||||+.+|+.+|++ +|+.
T Consensus 110 i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~----aG~~ 184 (214)
T 3e58_A 110 LASSSVKADIFRALEE-NRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVA----ADVE 184 (214)
T ss_dssp EEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHH----TTCE
T ss_pred EEeCCcHHHHHHHHHH-cCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHH----CCCE
Confidence 9999999999999995 99999999999865 2499999999999999999999999999999999998 9999
Q ss_pred EEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 233 LYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 233 ~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++++.+|...... ..|..+..++++|
T Consensus 185 ~~~~~~~~~~~~~----~~a~~~~~~~~el 210 (214)
T 3e58_A 185 VWAIRDNEFGMDQ----SAAKGLLDSLTDV 210 (214)
T ss_dssp EEEECCSSSCCCC----TTSSEEESSGGGG
T ss_pred EEEECCCCccchh----ccHHHHHHHHHHH
Confidence 9999998554432 4455555555544
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=205.27 Aligned_cols=198 Identities=10% Similarity=0.058 Sum_probs=145.3
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+||.+.+..+...+++++ |.+.. .+.++.+.|.+....+ +.+..
T Consensus 29 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~--~~~~~------- 85 (250)
T 3l5k_A 29 PVTHLIFDMDGLLLDTERLYSVVFQEICNRY------DKKYS--------WDVKSLVMGKKALEAA--QIIID------- 85 (250)
T ss_dssp CCSEEEEETBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHHHHHHTTCCHHHHH--HHHHH-------
T ss_pred CCcEEEEcCCCCcCCCHHHHHHHHHHHHHHh------CCCCC--------HHHHHHhcCCCHHHHH--HHHHH-------
Confidence 3589999999999999999999999999998 33311 2345666666554432 11111
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcC--CHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (263)
.+++ +.+.+ ...+++.|.+. .....++||+.++|+ ++|+++
T Consensus 86 --------------------------~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~g~~~ 131 (250)
T 3l5k_A 86 --------------------------VLQLPMSKEEL---VEESQTKLKEV-----FPTAALMPGAEKLIIHLRKHGIPF 131 (250)
T ss_dssp --------------------------HHTCSSCHHHH---HHHHHHHHHHH-----GGGCCBCTTHHHHHHHHHHTTCCE
T ss_pred --------------------------HhCCCCCHHHH---HHHHHHHHHHH-----hccCCCCCCHHHHHHHHHhCCCcE
Confidence 1111 11111 12233333222 234689999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCCCceEEcCC--C----CCcHHHHHHHHhhCCCCC--CcEEEEcCChhhHHHhhccCc
Q 024758 156 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG--T----GPKVNVLKQLQKKPEHQG--LRLHFVEDRLATLKNVIKEPE 227 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~--~----~pkp~~l~~~l~~l~~~~--~~~l~VGDs~~Di~aA~~~~~ 227 (263)
+|+||.+...+...+.+++|+..+|+.+++++ . +|+|+++..+++++|+++ ++|+||||+.+|+++|++
T Consensus 132 ~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~--- 208 (250)
T 3l5k_A 132 ALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALA--- 208 (250)
T ss_dssp EEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHH---
T ss_pred EEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHH---
Confidence 99999998888877753368989999999765 2 499999999999999998 999999999999999998
Q ss_pred CCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 228 LDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 228 ~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+|+.+++|.+|....+ ....|..+..++++|
T Consensus 209 -aG~~~i~v~~~~~~~~---~~~~ad~v~~sl~el 239 (250)
T 3l5k_A 209 -AGMQVVMVPDGNLSRD---LTTKATLVLNSLQDF 239 (250)
T ss_dssp -TTCEEEECCCTTSCGG---GSTTSSEECSCGGGC
T ss_pred -cCCEEEEEcCCCCchh---hcccccEeecCHHHh
Confidence 9999999999987654 234555566666654
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-27 Score=200.14 Aligned_cols=200 Identities=16% Similarity=0.103 Sum_probs=138.2
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.|+|+|||||||+||.+.+..+.+.+++++ |++.. .+.++.+.|.+....+ +.+....
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~------ 59 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQI------DIPFD--------RDMNERLKGISREESL--ESILIFG------ 59 (233)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHHHHHTTTCCHHHHH--HHHHHHT------
T ss_pred CcEEEECCCCCcCCCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHcCCCHHHHH--HHHHHHh------
Confidence 489999999999999999999999999998 44421 2356677777654433 1111100
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
+. ...++++........+.+.|.+.... .....+|||+.++|+ ++|++++|+
T Consensus 60 -----~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i~ 114 (233)
T 3nas_A 60 -----GA------------------ETKYTNAEKQELMHRKNRDYQMLISK--LTPEDLLPGIGRLLCQLKNENIKIGLA 114 (233)
T ss_dssp -----TC------------------TTTSCHHHHHHHHHHHHHHHHHHHHT--CCGGGSCTTHHHHHHHHHHTTCEEEEC
T ss_pred -----CC------------------CCCCCHHHHHHHHHHHHHHHHHHHhh--cCcCCcCcCHHHHHHHHHHCCCcEEEE
Confidence 00 00123334444444455554443221 112348999999999 789999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||++. ++.++++ +|+..+|+.+++++ .+|+|+++..+++++|++|++|+||||+.+|+++|++ ||+.++
T Consensus 115 t~~~~--~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~----aG~~~~ 187 (233)
T 3nas_A 115 SSSRN--APKILRR-LAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKS----AGMFAV 187 (233)
T ss_dssp CSCTT--HHHHHHH-TTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHH----TTCEEE
T ss_pred cCchh--HHHHHHH-cCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHH----cCCEEE
Confidence 99866 8889995 99999999999875 2488999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++.+. +++. .|..+..++++|
T Consensus 188 ~~~~~----~~~~---~ad~v~~s~~el 208 (233)
T 3nas_A 188 GVGQG----QPML---GADLVVRQTSDL 208 (233)
T ss_dssp ECC--------------CSEECSSGGGC
T ss_pred EECCc----cccc---cCCEEeCChHhC
Confidence 98654 3333 455555665554
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-27 Score=205.31 Aligned_cols=197 Identities=17% Similarity=0.133 Sum_probs=145.8
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.|+|+|||||||+|+...+..+.+.+++++ |++... .+.++.+.|.+....+ +.+..
T Consensus 28 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~--~~~~~-------- 84 (259)
T 4eek_A 28 FDAVLFDLDGVLVESEGIIAQVWQSVLAER------GLHLDL-------TEIAMYFTGQRFDGVL--AYLAQ-------- 84 (259)
T ss_dssp CSEEEEESBTTTEECHHHHHHHHHHHHHHT------TCCCCH-------HHHHHHTTTCCHHHHH--HHHHH--------
T ss_pred CCEEEECCCCCcccCHHHHHHHHHHHHHHh------CCCCCH-------HHHHHHHhCCCHHHHH--HHHHH--------
Confidence 589999999999999999999999999998 444211 1334556666654433 11111
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhc--CCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~la 156 (263)
.++ .+++.. ..+++.|.+.+ ....++||+.++|+ ++|++++
T Consensus 85 -------------------------~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~l~~l~~~g~~~~ 130 (259)
T 4eek_A 85 -------------------------QHDFVPPPDFL----DVLETRFNAAM-----TGVTAIEGAAETLRALRAAGVPFA 130 (259)
T ss_dssp -------------------------HHCCCCCTTHH----HHHHHHHHHHH-----TTCEECTTHHHHHHHHHHHTCCEE
T ss_pred -------------------------HcCCCCCHHHH----HHHHHHHHHHh-----ccCCcCccHHHHHHHHHHCCCeEE
Confidence 011 111111 22333333322 34689999999998 6799999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCce-EEcCC-----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCC
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDR-LYGLG-----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~-v~G~~-----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 230 (263)
|+||.+...++.++++ +|+..+|+. +++++ .+|+|+.+..+++++|++|++++||||+.+|+++|++ +|
T Consensus 131 i~s~~~~~~~~~~l~~-~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~----aG 205 (259)
T 4eek_A 131 IGSNSERGRLHLKLRV-AGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLA----AG 205 (259)
T ss_dssp EECSSCHHHHHHHHHH-TTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HT
T ss_pred EEeCCCHHHHHHHHHh-cChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH----CC
Confidence 9999999999999996 999999998 88653 3499999999999999999999999999999999998 99
Q ss_pred CcEEEEcCCCCC----hHHHHhhhhHhHHHhhhcc
Q 024758 231 WNLYLGNLFRFL----CHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 231 i~~v~v~wGy~~----~~~l~~~~~~~~~~~~~~~ 261 (263)
+.+|+|.||... .+++. ...|.-++.++++
T Consensus 206 ~~~i~v~~g~~~~~~~~~~~~-~~~ad~vi~~l~e 239 (259)
T 4eek_A 206 ATLWGLLVPGHPHPDGAAALS-RLGAARVLTSHAE 239 (259)
T ss_dssp CEEEEECCTTSCCSSCHHHHH-HHTCSEEECSHHH
T ss_pred CEEEEEccCCCcccccHHHHH-hcCcchhhCCHHH
Confidence 999999999766 55554 3445555555544
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=193.94 Aligned_cols=201 Identities=12% Similarity=0.064 Sum_probs=147.6
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.|+|+|||||||+|+-+.+..+...+++++ |.+... .+.++.++|.+..... ..+..
T Consensus 6 ~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~--~~~~~-------- 62 (225)
T 3d6j_A 6 YTVYLFDFDYTLADSSRGIVTCFRSVLERH------GYTGIT-------DDMIKRTIGKTLEESF--SILTG-------- 62 (225)
T ss_dssp CSEEEECCBTTTEECHHHHHHHHHHHHHHT------TCCCCC-------HHHHHTTTTSCHHHHH--HHHHC--------
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHHHHHHHh------CCCCCC-------HHHHHHHhCCcHHHHH--HHHcC--------
Confidence 599999999999999999999998999988 333211 1345556676654432 11111
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
.. ..+........+...|. +.+.....++||+.++|+ ++|++++|+
T Consensus 63 -----~~----------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~ 111 (225)
T 3d6j_A 63 -----IT----------------------DADQLESFRQEYSKEAD----IYMNANTILFPDTLPTLTHLKKQGIRIGII 111 (225)
T ss_dssp -----CC----------------------CHHHHHHHHHHHHHHHH----HHTGGGCEECTTHHHHHHHHHHHTCEEEEE
T ss_pred -----CC----------------------CHHHHHHHHHHHHHHHH----HhccccCccCcCHHHHHHHHHHCCCeEEEE
Confidence 00 11111122222333332 223344678999999998 679999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||.+...++..+++ +|+..+|+.+++.+ .+|+|+.+..+++++|++++++++|||+.+|+.++++ +|+.++
T Consensus 112 s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~----aG~~~~ 186 (225)
T 3d6j_A 112 STKYRFRILSFLRN-HMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAA----AGVSFT 186 (225)
T ss_dssp CSSCHHHHHHHHHT-SSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEEE
T ss_pred ECCCHHHHHHHHHH-cCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH----CCCeEE
Confidence 99999999999995 99999999998754 3488999999999999999999999999999999997 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+|.||++..+++.+ ..|..+..+.++|
T Consensus 187 ~~~~~~~~~~~l~~-~~ad~v~~~~~el 213 (225)
T 3d6j_A 187 GVTSGMTTAQEFQA-YPYDRIISTLGQL 213 (225)
T ss_dssp EETTSSCCTTGGGG-SCCSEEESSGGGG
T ss_pred EECCCCCChHHHhh-cCCCEEECCHHHH
Confidence 99999988776653 3344455555543
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.7e-27 Score=196.95 Aligned_cols=212 Identities=12% Similarity=0.074 Sum_probs=140.7
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+|+-+.+..+...+.+.+... |.+......+.........++|.+..... ..+.+
T Consensus 7 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------- 74 (234)
T 3ddh_A 7 LIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPY---GTSKEISAALFQTEMNNLQILGYGAKAFT--ISMVE------- 74 (234)
T ss_dssp TCCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGG---SCHHHHHHHHHHHHHHTHHHHCSSHHHHH--HHHHH-------
T ss_pred cccEEEEeCCCCCccCcchHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhhhhhhcCCcchhH--HHHHH-------
Confidence 5799999999999999998888877666665211 21100000000001111345565543321 10100
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHh--hhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCC-Cc
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIME--EWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS-SR 154 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g-~~ 154 (263)
.... ...++++...+....+++ .+.....+|||+.++|+ ++| ++
T Consensus 75 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~l~~~g~~~ 124 (234)
T 3ddh_A 75 ----------------------TALQISNGKIAADIIRQIVDLGKS--------LLKMPIELLPGVKETLKTLKETGKYK 124 (234)
T ss_dssp ----------------------HHHHHTTTCCCHHHHHHHHHHHHH--------HTTCCCCBCTTHHHHHHHHHHHCCCE
T ss_pred ----------------------HHHHHhcCCCCHHHHHHHHHHHHH--------HhhccCCcCccHHHHHHHHHhCCCeE
Confidence 0001 012333333333333322 22345689999999999 778 99
Q ss_pred EEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcE
Q 024758 155 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNL 233 (263)
Q Consensus 155 laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~ 233 (263)
++|+||.+...++.++++ +|+..+|+.+++.. +|||+.+..+++++|++|++|++|||+. +|+++|++ +|+.+
T Consensus 125 ~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~-kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~----aG~~~ 198 (234)
T 3ddh_A 125 LVVATKGDLLDQENKLER-SGLSPYFDHIEVMS-DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLS----LGGYG 198 (234)
T ss_dssp EEEEEESCHHHHHHHHHH-HTCGGGCSEEEEES-CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHH----HTCEE
T ss_pred EEEEeCCchHHHHHHHHH-hCcHhhhheeeecC-CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHH----CCCeE
Confidence 999999999999999995 99999999999753 6999999999999999999999999996 99999998 99999
Q ss_pred EEE----cCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLG----NLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v----~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++| +||+...+. ....+..+..++++|
T Consensus 199 v~v~~~~~~g~~~~~~--~~~~~d~v~~~l~el 229 (234)
T 3ddh_A 199 VHIPFEVMWKHEVTET--FAHERLKQVKRLDDL 229 (234)
T ss_dssp EECCCCTTCCCC---C--CCCTTEEECSSGGGH
T ss_pred EEecCCcccccCCccc--ccCCCceecccHHHH
Confidence 999 777765553 222334555555543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=191.68 Aligned_cols=203 Identities=15% Similarity=0.074 Sum_probs=145.7
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+|+-+.+..+...+++++ |.+.. ..+.++.+.|......+. ..+..
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~-------~~~~~~~~~g~~~~~~~~-~~~~~------- 66 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDIS-------RRNELPDTLGLRIDMVVD-LWYAR------- 66 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHT------TCCGG-------GGGGSCCCTTCCHHHHHH-HHHHH-------
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHc------CCCCC-------hHHHHHHHhCCCHHHHHH-HHHHH-------
Confidence 4689999999999999999998888889988 44321 023455566665443321 11111
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.+++.....+....+++.|.+.+ .....++||+.++|+ ++|++++|
T Consensus 67 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i 115 (226)
T 1te2_A 67 ---------------------------QPWNGPSRQEVVERVIARAISLV----EETRPLLPGVREAVALCKEQGLLVGL 115 (226)
T ss_dssp ---------------------------SCCSSSCHHHHHHHHHHHHHHHH----HHHCCBCTTHHHHHHHHHHTTCEEEE
T ss_pred ---------------------------cCCCccCHHHHHHHHHHHHHHHH----hccCCcCccHHHHHHHHHHCCCcEEE
Confidence 01100001111222233333222 123578999999998 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||.+...++.++++ +|+..+|+.+++.+ .+|+|+.+..+++++|++++++++|||+.+|+++|++ +|+.+
T Consensus 116 ~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~----aG~~~ 190 (226)
T 1te2_A 116 ASASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKA----ARMRS 190 (226)
T ss_dssp EESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHH----TTCEE
T ss_pred EeCCcHHHHHHHHHh-cCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH----cCCEE
Confidence 999999999999995 99999999999865 2488999999999999999999999999999999997 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++|.||++..+++. ..|..++.+.++|
T Consensus 191 ~~~~~~~~~~~~~~--~~a~~v~~~~~el 217 (226)
T 1te2_A 191 IVVPAPEAQNDPRF--VLANVKLSSLTEL 217 (226)
T ss_dssp EECCCTTTTTCGGG--GGSSEECSCGGGC
T ss_pred EEEcCCCCcccccc--cccCeEECCHHHH
Confidence 99999987665433 3445555555554
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=195.91 Aligned_cols=211 Identities=13% Similarity=0.094 Sum_probs=145.6
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHh---CCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVR---WPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLP 77 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~---~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~ 77 (263)
|.|+|+||+||||+|+-+.+..+...+++.+ ++. .....|..+..+. ..+.. ..|
T Consensus 1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~-------------------~~~~~~~~~~~~~--~~~~~-~~~ 58 (230)
T 3vay_A 1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPK-------------------LGPVPVEHLWEIR--SRLLD-EDP 58 (230)
T ss_dssp CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTT-------------------TCSCCHHHHHHHH--HHHHH-HCG
T ss_pred CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCc-------------------chhhHHHHHHHHH--HHHHH-hCc
Confidence 8899999999999999988887776666555 211 0001111111111 11111 001
Q ss_pred cccccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcE
Q 024758 78 SLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRI 155 (263)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~l 155 (263)
. ...+... .+......+...++++.+...+....+.+.|... .....+|||+.++|+ ++.+++
T Consensus 59 ~-------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~~~~ 123 (230)
T 3vay_A 59 S-------FKHRISA---LRRRVLFHALEDAGYDSDEAQQLADESFEVFLHG-----RHQVQIFPEVQPTLEILAKTFTL 123 (230)
T ss_dssp G-------GGGCHHH---HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH-----HTCCCBCTTHHHHHHHHHTTSEE
T ss_pred c-------ccccHHH---HHHHHHHHHHHHhCCChhhhHHHHHHHHHHHHHh-----hccCccCcCHHHHHHHHHhCCeE
Confidence 0 0001111 1112234455667888877777777776666543 234689999999999 444999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCC
Q 024758 156 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDG 230 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Ag 230 (263)
+|+||.+.. |++ +|+..+|+.+++++ .+|+|+++..+++++|++|++++||||+. +|+++|++ +|
T Consensus 124 ~i~t~~~~~-----l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~----aG 193 (230)
T 3vay_A 124 GVITNGNAD-----VRR-LGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQ----AG 193 (230)
T ss_dssp EEEESSCCC-----GGG-STTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHH----TT
T ss_pred EEEECCchh-----hhh-cCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHH----CC
Confidence 999999876 674 99999999999864 35999999999999999999999999998 99999998 99
Q ss_pred CcEEEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 231 WNLYLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 231 i~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+.+++|.||++..+. ...|..++.++++
T Consensus 194 ~~~~~v~~~~~~~~~---~~~~~~~~~~l~e 221 (230)
T 3vay_A 194 MRAIWYNPQGKAWDA---DRLPDAEIHNLSQ 221 (230)
T ss_dssp CEEEEECTTCCCCCS---SSCCSEEESSGGG
T ss_pred CEEEEEcCCCCCCcc---cCCCCeeECCHHH
Confidence 999999999886654 3344444444443
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-26 Score=198.62 Aligned_cols=100 Identities=13% Similarity=0.027 Sum_probs=91.1
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..++|||+.++|+ +++++++|+||++...++.+|++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+
T Consensus 119 ~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 197 (260)
T 2gfh_A 119 HMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 197 (260)
T ss_dssp TCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHh-cCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 4689999999999 66799999999999999999995 99999999988754 35999999999999999999999
Q ss_pred EEcCC-hhhHHHhhccCcCCCC-cEEEEcCCCC
Q 024758 211 FVEDR-LATLKNVIKEPELDGW-NLYLGNLFRF 241 (263)
Q Consensus 211 ~VGDs-~~Di~aA~~~~~~Agi-~~v~v~wGy~ 241 (263)
||||+ .+|+++|++ +|+ .+|+|+||..
T Consensus 198 ~vGDs~~~Di~~A~~----aG~~~~i~v~~~~~ 226 (260)
T 2gfh_A 198 MVGDTLETDIQGGLN----AGLKATVWINKSGR 226 (260)
T ss_dssp EEESCTTTHHHHHHH----TTCSEEEEECTTCC
T ss_pred EECCCchhhHHHHHH----CCCceEEEEcCCCC
Confidence 99995 999999998 999 8999998854
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-26 Score=198.60 Aligned_cols=193 Identities=13% Similarity=-0.001 Sum_probs=142.0
Q ss_pred CcEEEEecCcccccCHH-HHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCE-ETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~-di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+|||||||+||-. .+..+.+.+++++ |++.. ...++.++|.+....+ ..+..
T Consensus 6 ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~------G~~~~--------~~~~~~~~g~~~~~~~--~~~~~------- 62 (267)
T 1swv_A 6 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKR------GVAIT--------AEEARKPMGLLKIDHV--RALTE------- 62 (267)
T ss_dssp CCEEEECSBTTTBSTTCCTTHHHHHHHHHTT------TCCCC--------HHHHHTTTTSCHHHHH--HHHHH-------
T ss_pred ceEEEEecCCCEEeCCCccHHHHHHHHHHHc------CCCCC--------HHHHHHHhccchHHHH--HHhcc-------
Confidence 58999999999999987 7788888889888 44321 2356677777654432 11111
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhc--CCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (263)
+ .... ..+...++ ++.+.+.+....+++.|.. .+.....+|||+.++|+ ++|+++
T Consensus 63 ------~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~~~ 122 (267)
T 1swv_A 63 ------M---PRIA-------SEWNRVFRQLPTEADIQEMYEEFEEILFA----ILPRYASPINGVKEVIASLRERGIKI 122 (267)
T ss_dssp ------S---HHHH-------HHHHHHHSSCCCHHHHHHHHHHHHHHHHH----HGGGGCCBCTTHHHHHHHHHHTTCEE
T ss_pred ------c---HHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHH----hhccccccCccHHHHHHHHHHcCCeE
Confidence 0 0000 01111222 2444444445555544433 23344679999999998 789999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCCC-ceEEcCC----CCCcHHHHHHHHhhCCCCC-CcEEEEcCChhhHHHhhccCcCC
Q 024758 156 YIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEPELD 229 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~~~f-~~v~G~~----~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~aA~~~~~~A 229 (263)
+|+||++...++.++++ +|+..+| +.+++.+ .+|||+.+..+++++|+++ +++++|||+.+|+++|++ |
T Consensus 123 ~i~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~----a 197 (267)
T 1swv_A 123 GSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRN----A 197 (267)
T ss_dssp EEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHH----T
T ss_pred EEEcCCCHHHHHHHHHH-cCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHH----C
Confidence 99999999999999995 9988885 8888764 3499999999999999999 999999999999999997 9
Q ss_pred CCcEEEEcCCCCC
Q 024758 230 GWNLYLGNLFRFL 242 (263)
Q Consensus 230 gi~~v~v~wGy~~ 242 (263)
|+.+++|.||++.
T Consensus 198 G~~~i~v~~~~~~ 210 (267)
T 1swv_A 198 GMWTVGVILGSSE 210 (267)
T ss_dssp TSEEEEECTTCTT
T ss_pred CCEEEEEcCCCCc
Confidence 9999999999874
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=193.52 Aligned_cols=195 Identities=14% Similarity=0.102 Sum_probs=135.1
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.|+|+|||||||+|+.+.+..+.+.+++++ |++... ...+.+.+.+.... ..+.. .
T Consensus 7 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~--------~~~~~~~~~~~~~~---~~~~~-~------ 62 (238)
T 3ed5_A 7 YRTLLFDVDDTILDFQAAEALALRLLFEDQ------NIPLTN--------DMKAQYKTINQGLW---RAFEE-G------ 62 (238)
T ss_dssp CCEEEECCBTTTBCHHHHHHHHHHHHHHHT------TCCCCH--------HHHHHHHHHHHHHH---HHHHT-T------
T ss_pred CCEEEEcCcCcCcCCchhHHHHHHHHHHHc------CCCcch--------HHHHHHHHHHHHHH---HHHHh-c------
Confidence 599999999999999999999999999998 444211 11222222111110 11111 0
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
..+..+... .....+.+.++++.. ...+.+.|.+. +.....+|||+.++|+ ++ ++++|+
T Consensus 63 -----~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~-~~~~i~ 124 (238)
T 3ed5_A 63 -----KMTRDEVVN---TRFSALLKEYGYEAD-----GALLEQKYRRF----LEEGHQLIDGAFDLISNLQQQ-FDLYIV 124 (238)
T ss_dssp -----SSCHHHHHH---HHHHHHHHHTTCCCC-----HHHHHHHHHHH----HTTCCCBCTTHHHHHHHHHTT-SEEEEE
T ss_pred -----cCCHHHHHH---HHHHHHHHHcCCCCc-----HHHHHHHHHHH----HHhcCCCCccHHHHHHHHHhc-CeEEEE
Confidence 111211110 111223333333211 01222333322 2234689999999999 55 999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCC-CCCCcEEEEcCCh-hhHHHhhccCcCCCCc
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPE-HQGLRLHFVEDRL-ATLKNVIKEPELDGWN 232 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~-~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~ 232 (263)
||++...++..+++ +|+..+|+.+++++ .+|+|+.+..+++++| ++|++++||||+. +|+++|++ +|+.
T Consensus 125 t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~----aG~~ 199 (238)
T 3ed5_A 125 TNGVSHTQYKRLRD-SGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQL----AGLD 199 (238)
T ss_dssp ECSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHH----TTCE
T ss_pred eCCCHHHHHHHHHH-cChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHH----CCCE
Confidence 99999999999996 99999999999864 3499999999999999 9999999999998 99999998 9999
Q ss_pred EEEEcCCCCCh
Q 024758 233 LYLGNLFRFLC 243 (263)
Q Consensus 233 ~v~v~wGy~~~ 243 (263)
+|+|.||....
T Consensus 200 ~i~~~~~~~~~ 210 (238)
T 3ed5_A 200 TCWMNPDMKPN 210 (238)
T ss_dssp EEEECTTCCCC
T ss_pred EEEECCCCCCC
Confidence 99999996543
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.9e-27 Score=198.99 Aligned_cols=217 Identities=10% Similarity=-0.037 Sum_probs=144.8
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.|+|+|||||||+|+.+.+..+.+.+++++ |++... .+..+.+.+...... .+.... ..+
T Consensus 15 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~~~~~~~~--~~~~~~-~~~---- 74 (254)
T 3umg_A 15 VRAVLFDTFGTVVDWRTGIATAVADYAARH------QLEVDA-------VAFADRWRARYQPSM--DAILSG-ARE---- 74 (254)
T ss_dssp CCEEEECCBTTTBCHHHHHHHHHHHHHHHT------TCCCCH-------HHHHHHHHTTHHHHH--HHHHTT-SSC----
T ss_pred ceEEEEeCCCceecCchHHHHHHHHHHHHh------cCCCCH-------HHHHHHHHHhHHHHH--HHHHhc-CCC----
Confidence 589999999999999999999999999999 444221 123344554322111 121111 000
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEEEc
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVT 159 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI~T 159 (263)
....... +......+.+.++.+.+.+. ....+.+... .....+|||+.++|+ +++++++|+|
T Consensus 75 -----~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~~~~~i~t 138 (254)
T 3umg_A 75 -----FVTLDIL---HRENLDFVLRESGIDPTNHD---SGELDELARA-----WHVLTPWPDSVPGLTAIKAEYIIGPLS 138 (254)
T ss_dssp -----CCCHHHH---HHHHHHHHHHHTTCCGGGSC---HHHHHHHHGG-----GGSCCBCTTHHHHHHHHHHHSEEEECS
T ss_pred -----CCCHHHH---HHHHHHHHHHHhCCCcCcCC---HHHHHHHHHH-----HhhCcCCcCHHHHHHHHHhCCeEEEEe
Confidence 0011111 11112233344443100000 0111222221 234689999999998 3349999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 160 SNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 160 nK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
|++...++.++++ +|+. |+.+++++ .+|+|+.+..+++++|++|++++||||+.+|+++|++ +|+.+++
T Consensus 139 ~~~~~~~~~~l~~-~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~----aG~~~~~ 211 (254)
T 3umg_A 139 NGNTSLLLDMAKN-AGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHA----TGLATAF 211 (254)
T ss_dssp SSCHHHHHHHHHH-HTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHH----TTCEEEE
T ss_pred CCCHHHHHHHHHh-CCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHH----CCCEEEE
Confidence 9999999999995 9996 88888754 4599999999999999999999999999999999998 9999999
Q ss_pred Ec----CCCCChHHHHhhhhHhHHHhhhcc
Q 024758 236 GN----LFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 236 v~----wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
|. ||++..+++.....|..++.++.+
T Consensus 212 ~~~~~~~g~~~~~~~~~~~~~d~~~~~~~e 241 (254)
T 3umg_A 212 ILRPVEHGPHQTDDLAPTGSWDISATDITD 241 (254)
T ss_dssp ECCTTTTCTTCCSCSSCSSCCSEEESSHHH
T ss_pred EecCCcCCCCccccccccCCCceEECCHHH
Confidence 99 999887766334455555554443
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=194.67 Aligned_cols=197 Identities=10% Similarity=-0.020 Sum_probs=133.6
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+|+-+.+..+.+.+++++ |.+... ...+.++.+- .... .....
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-----~~~~~~~~~~----~~~~--~~~~~------- 58 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKIS------GLHIKD-----VANAVIEVRN----EIKK--MRAQA------- 58 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHH------TCCHHH-----HHHHHHHHHH----HHHH--HHHTT-------
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHc------CCCCcH-----HHHHHHHHHH----HHHH--Hhhhh-------
Confidence 4699999999999999999998998899888 433110 0001111100 0000 00000
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.+.+..... .....+...++++.+...+... .|...+ .. ..++||+.++|+ ++|++++|
T Consensus 59 -----~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~-~~~~~~~~~~l~~l~~~g~~~~i 120 (235)
T 2om6_A 59 -----SEDPRKVLT----GSQEALAGKLKVDVELVKRATA----RAILNV----DE-SLVLEGTKEALQFVKERGLKTAV 120 (235)
T ss_dssp -----CCCTTTHHH----HHHHHHHHHHTCCHHHHHHHHH----HHHHHC----CG-GGBCTTHHHHHHHHHHTTCEEEE
T ss_pred -----cCCCcchHH----HHHHHHHHHhCCCHHHHHHHHH----HHHHhc----cc-cCcCccHHHHHHHHHHCCCEEEE
Confidence 011111000 1112233333454433333332 222222 12 246999999999 78999999
Q ss_pred EcCCc---hHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCC
Q 024758 158 VTSNQ---SRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELD 229 (263)
Q Consensus 158 ~TnK~---~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~A 229 (263)
+||++ ...++..+++ +|+..+|+.+++++ .+|+|+++..+++++|++|++|++|||+. +|+++|++ |
T Consensus 121 ~t~~~~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~----a 195 (235)
T 2om6_A 121 IGNVMFWPGSYTRLLLER-FGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARK----V 195 (235)
T ss_dssp EECCCSSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHH----T
T ss_pred EcCCcccchhHHHHHHHh-CCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHH----C
Confidence 99999 9999999995 99999999999854 45999999999999999999999999999 99999997 9
Q ss_pred CCcEEEEcCCCCChHH
Q 024758 230 GWNLYLGNLFRFLCHI 245 (263)
Q Consensus 230 gi~~v~v~wGy~~~~~ 245 (263)
|+.++++.|| +...+
T Consensus 196 G~~~~~~~~~-~~~~~ 210 (235)
T 2om6_A 196 GMWAVWINQE-GDKVR 210 (235)
T ss_dssp TSEEEEECTT-CCSCE
T ss_pred CCEEEEECCC-CCCcc
Confidence 9999999999 44433
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.5e-26 Score=195.67 Aligned_cols=190 Identities=11% Similarity=0.036 Sum_probs=131.7
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCc---chhhhhhhhhhccc--cccccchHHHHHHHHHhhccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDS---ALEDWIVDQMHTLR--PVVETGYDTLLLVRLLLEMRL 76 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~---~~~~~~~~~~~~~r--~~ig~G~~~~i~~~~l~~~~~ 76 (263)
.|+|+|||||||+||.+.+..+.+.+++.+... |.+. .. +.+.. ..++ ...|.+...+. +.+..
T Consensus 13 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~---g~~~~~~~~-~~~~~--~~~~~~~~~g~~~~~~~--~~~~~--- 81 (251)
T 2pke_A 13 IQLVGFDGDDTLWKSEDYYRTAEADFEAILSGY---LDLGDSRMQ-QHLLA--VERRNLKIFGYGAKGMT--LSMIE--- 81 (251)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTT---CCC-----C-TTHHH--HHHHHHHHHCSSHHHHH--HHHHH---
T ss_pred eeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHh---CCchhHHHH-HHHHH--HHhhhhhhccCcchHHH--HHHHH---
Confidence 589999999999999999999988888654111 3331 10 00000 1111 24565544322 11100
Q ss_pred ccccccccccCcchHHHHHhhhhhhhhHHhhhc--CCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCC
Q 024758 77 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LAS 152 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g 152 (263)
.....++ .+.+ ....+.+.|.+. +.....++||+.++|+ ++|
T Consensus 82 --------------------------~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~ 127 (251)
T 2pke_A 82 --------------------------TAIELTEARIEAR----DIQRIVEIGRAT----LQHPVEVIAGVREAVAAIAAD 127 (251)
T ss_dssp --------------------------HHHHHTTTCCCHH----HHHHHHHHHHHH----HTCCCCBCTTHHHHHHHHHTT
T ss_pred --------------------------HHHHhcCCCCChH----HHHHHHHHHHHH----HhccCCcCccHHHHHHHHHCC
Confidence 0000011 1111 122233333322 2345689999999999 788
Q ss_pred CcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCC
Q 024758 153 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGW 231 (263)
Q Consensus 153 ~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi 231 (263)
++++|+||++...++..+++ +|+..+|+.+++. .+|+|+.+..+++++|++|++|++|||+. +|+++|++ +|+
T Consensus 128 ~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~-~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~----aG~ 201 (251)
T 2pke_A 128 YAVVLITKGDLFHQEQKIEQ-SGLSDLFPRIEVV-SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLA----IGG 201 (251)
T ss_dssp SEEEEEEESCHHHHHHHHHH-HSGGGTCCCEEEE-SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHH----TTC
T ss_pred CEEEEEeCCCHHHHHHHHHH-cCcHHhCceeeee-CCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHH----CCC
Confidence 99999999999999999995 9999999999884 36999999999999999999999999999 99999997 999
Q ss_pred cEEEEcCCCCC
Q 024758 232 NLYLGNLFRFL 242 (263)
Q Consensus 232 ~~v~v~wGy~~ 242 (263)
.+++|.||+..
T Consensus 202 ~~~~v~~~~~~ 212 (251)
T 2pke_A 202 WGIYTPYAVTW 212 (251)
T ss_dssp EEEECCCC---
T ss_pred EEEEECCCCcc
Confidence 99999999863
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-26 Score=193.15 Aligned_cols=199 Identities=13% Similarity=0.082 Sum_probs=139.4
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcc--hhhhhhhhhhccccccccchHHHHHHHHHhhccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSA--LEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPS 78 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~--~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~ 78 (263)
|.|+|+||+||||+|+.+.+..+.+.+++++ |++.. +.+ +....+.+.+.... ..+..
T Consensus 4 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~----- 63 (240)
T 3qnm_A 4 KYKNLFFDLDDTIWAFSRNARDTFEEVYQKY------SFDRYFDSFD------HYYTLYQRRNTELW---LEYGE----- 63 (240)
T ss_dssp CCSEEEECCBTTTBCHHHHHHHHHHHHHHHT------TGGGTSSSHH------HHHHHHHHHHHHHH---HHHHT-----
T ss_pred CceEEEEcCCCCCcCchhhHHHHHHHHHHHc------CCCcccCCHH------HHHHHHHHHHHHHH---HHHhc-----
Confidence 3699999999999999999999999999998 33310 011 11222222111110 11110
Q ss_pred ccccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEE
Q 024758 79 LRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIY 156 (263)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~la 156 (263)
.....++... .....+++.++++.+ +....+.+.|.. .+.....+|||+.++|+ ++|++++
T Consensus 64 -------~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~g~~~~ 126 (240)
T 3qnm_A 64 -------GKVTKEELNR---QRFFYPLQAVGVEDE---ALAERFSEDFFA----IIPTKSGLMPHAKEVLEYLAPQYNLY 126 (240)
T ss_dssp -------TSSCHHHHHH---HHHHHHHHHTTCCCH---HHHHHHHHHHHH----HGGGCCCBSTTHHHHHHHHTTTSEEE
T ss_pred -------CCCCHHHHHH---HHHHHHHHHcCCCcH---HHHHHHHHHHHH----HhhhcCCcCccHHHHHHHHHcCCeEE
Confidence 0112222111 112334444455421 222333334333 23344689999999999 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCC
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGW 231 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi 231 (263)
|+||.+...++..++. +|+..+|+.+++++ .+|+|+.+..+++++|++|++++||||+. +|+++|++ +|+
T Consensus 127 i~sn~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~----aG~ 201 (240)
T 3qnm_A 127 ILSNGFRELQSRKMRS-AGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHG----VGM 201 (240)
T ss_dssp EEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHH----TTC
T ss_pred EEeCCchHHHHHHHHH-cChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHH----cCC
Confidence 9999999999999996 99999999999865 34999999999999999999999999995 99999998 999
Q ss_pred cEEEEcCCCC
Q 024758 232 NLYLGNLFRF 241 (263)
Q Consensus 232 ~~v~v~wGy~ 241 (263)
.++++.+|..
T Consensus 202 ~~~~~~~~~~ 211 (240)
T 3qnm_A 202 HQAFYNVTER 211 (240)
T ss_dssp EEEEECCSCC
T ss_pred eEEEEcCCCC
Confidence 9999999986
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=188.98 Aligned_cols=198 Identities=16% Similarity=0.121 Sum_probs=139.6
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+||-+.+..+...+++++ |.+... ....+.+.|.+....+. ..+ .
T Consensus 1 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~~-~~~-~------- 58 (221)
T 2wf7_A 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEI------GINGVD-------RQFNEQLKGVSREDSLQ-KIL-D------- 58 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHT------TCCCCS-------HHHHTTTTTCCHHHHHH-HHH-H-------
T ss_pred CCcEEEECCCCcccCChHHHHHHHHHHHHHc------CCCCCC-------HHHHHHhCCCCHHHHHH-HHH-H-------
Confidence 7899999999999999999999998999988 333111 12345566655433221 111 1
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhc--CCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (263)
.++ ++.+...+....+++.|...... .....++||+.++|+ ++|+++
T Consensus 59 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~ 110 (221)
T 2wf7_A 59 --------------------------LADKKVSAEEFKELAKRKNDNYVKMIQD--VSPADVYPGILQLLKDLRSNKIKI 110 (221)
T ss_dssp --------------------------HTTCCCCHHHHHHHHHHHHHHHHHHGGG--CCGGGBCTTHHHHHHHHHHTTCEE
T ss_pred --------------------------HhCCCCChHHHHHHHHHHHHHHHHHHhh--ccCCCCCCCHHHHHHHHHHCCCeE
Confidence 111 23333334444444444432211 123578999999998 789999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 156 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
+|+||+ ..++.++++ +|+..+|+.+++++ .+|+|+.+..+++++|++|++|++|||+.+|+++|++ ||+
T Consensus 111 ~i~t~~--~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~----aG~ 183 (221)
T 2wf7_A 111 ALASAS--KNGPFLLER-MNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD----SGA 183 (221)
T ss_dssp EECCCC--TTHHHHHHH-TTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTC
T ss_pred EEEcCc--HHHHHHHHH-cChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHH----CCC
Confidence 999999 456788995 99999999998865 3488999999999999999999999999999999997 999
Q ss_pred cEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 232 NLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 232 ~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
.++.+ +..+++. .|..+..+.++|
T Consensus 184 ~~~~~----~~~~~~~---~a~~v~~~~~el 207 (221)
T 2wf7_A 184 LPIGV----GRPEDLG---DDIVIVPDTSHY 207 (221)
T ss_dssp EEEEE----SCHHHHC---SSSEEESSGGGC
T ss_pred EEEEE----CCHHHhc---cccchhcCHHhC
Confidence 99888 3445543 344444554443
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-26 Score=202.21 Aligned_cols=221 Identities=14% Similarity=0.188 Sum_probs=147.4
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
|+|+|||||||+|+...+..+...+++++ |++.. + +.++..++.....+. ..+ |..
T Consensus 2 k~iiFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~-~-------~~~~~~~~~~~~~~~--~~~-----~~~--- 57 (263)
T 3k1z_A 2 RLLTWDVKDTLLRLRHPLGEAYATKARAH------GLEVE-P-------SALEQGFRQAYRAQS--HSF-----PNY--- 57 (263)
T ss_dssp CEEEECCBTTTEEESSCHHHHHHHHHHHT------TCCCC-H-------HHHHHHHHHHHHHHH--HHS-----TGG---
T ss_pred cEEEEcCCCceeCCCCCHHHHHHHHHHHh------CCCCC-H-------HHHHHHHHHHHHHhh--hhc-----ccc---
Confidence 79999999999999888888888888888 44311 1 122222221111110 000 000
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcC-CHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSE-NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
....+....+ .|..+....+...+. +.+.+.+....+...| +.. ....+|||+.++|+ ++|++++|+
T Consensus 58 ~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~l~~l~~~g~~~~i~ 128 (263)
T 3k1z_A 58 GLSHGLTSRQ---WWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDF---SHP---CTWQVLDGAEDTLRECRTRGLRLAVI 128 (263)
T ss_dssp GGGGTCCHHH---HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT---TSG---GGEEECTTHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCHHH---HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh---cCc---ccceECcCHHHHHHHHHhCCCcEEEE
Confidence 0000111111 111122233333333 3333333333333322 111 12479999999999 789999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNL 233 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~ 233 (263)
||.+.. ++.+|++ +|+..+|+.+++++ .+|+|+++..+++++|++|++|+||||+. +|+++|++ +|+.+
T Consensus 129 tn~~~~-~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~----aG~~~ 202 (263)
T 3k1z_A 129 SNFDRR-LEGILGG-LGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRA----VGMHS 202 (263)
T ss_dssp ESCCTT-HHHHHHH-TTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHT----TTCEE
T ss_pred eCCcHH-HHHHHHh-CCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHH----CCCEE
Confidence 998875 6899995 99999999999864 45999999999999999999999999997 99999997 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++|.||+....+.+....|..++.++++|
T Consensus 203 i~~~~~~~~~~~~~~~~~ad~v~~~l~el 231 (263)
T 3k1z_A 203 FLVVGPQALDPVVRDSVPKEHILPSLAHL 231 (263)
T ss_dssp EEECCSSCCCHHHHHHSCGGGEESSGGGH
T ss_pred EEEcCCCCCchhhcccCCCceEeCCHHHH
Confidence 99999987766555566677777776654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-26 Score=197.87 Aligned_cols=214 Identities=11% Similarity=-0.022 Sum_probs=146.5
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+|+.+.+..+...+++++ |++... .+..+.+++..... + ...+.. ..+
T Consensus 21 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~~~~~~~-~-~~~~~~-~~~--- 81 (254)
T 3umc_A 21 GMRAILFDVFGTLVDWRSSLIEQFQALEREL------GGTLPC-------VELTDRWRQQYKPA-M-DRVRNG-QAP--- 81 (254)
T ss_dssp SCCEEEECCBTTTEEHHHHHHHHHHHHHHHS------SSCCCH-------HHHHHHHHHHTHHH-H-HHHHTT-SSC---
T ss_pred CCcEEEEeCCCccEecCccHHHHHHHHHHHh------cCCCCH-------HHHHHHHHHHHHHH-H-HHHhcc-cCC---
Confidence 3699999999999999999999999999999 443211 12233333322111 1 111111 000
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcC--CHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIY 156 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~la 156 (263)
...... .+......+.+.++. +++. .+.+.. ......+|||+.++|+ +++++++
T Consensus 82 ------~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-----~~~~~~~~~~~~~~l~~l~~~~~~~ 139 (254)
T 3umc_A 82 ------WQHLDQ---LHRQSLEALAGEFGLALDEAL--------LQRITG-----FWHRLRPWPDTLAGMHALKADYWLA 139 (254)
T ss_dssp ------CCCHHH---HHHHHHHHHHHHTTCCCCHHH--------HHHHHG-----GGGSCEECTTHHHHHHHHTTTSEEE
T ss_pred ------cccHHH---HHHHHHHHHHHHhCCCCCHHH--------HHHHHH-----HHhcCCCCccHHHHHHHHHhcCeEE
Confidence 001111 111112233334433 2211 111211 1234689999999999 5569999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
|+||++...++.+++. +|+. |+.+++++ .+|||+.+..+++++|++|++++||||+.+|+++|++ +|+.
T Consensus 140 i~s~~~~~~~~~~l~~-~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~----aG~~ 212 (254)
T 3umc_A 140 ALSNGNTALMLDVARH-AGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARA----LGLK 212 (254)
T ss_dssp ECCSSCHHHHHHHHHH-HTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHH----TTCE
T ss_pred EEeCCCHHHHHHHHHH-cCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHH----CCCe
Confidence 9999999999999996 9996 89998764 3599999999999999999999999999999999998 9999
Q ss_pred EEEEc----CCCCChHHHHhhhhHhHHHhhhccc
Q 024758 233 LYLGN----LFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 233 ~v~v~----wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++++. ||++..+++.....|..+..++++|
T Consensus 213 ~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el 246 (254)
T 3umc_A 213 TAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDL 246 (254)
T ss_dssp EEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHH
T ss_pred EEEEecCCccCCCCCcccccCCCCcEEECCHHHH
Confidence 99999 9998888773344566666665543
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-26 Score=202.94 Aligned_cols=121 Identities=10% Similarity=0.028 Sum_probs=102.7
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh---CCCCCCceEEcCC--CCCcHHHHHHHHhhCCCCCC
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGLG--TGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~---gl~~~f~~v~G~~--~~pkp~~l~~~l~~l~~~~~ 207 (263)
....+|||+.++|+ ++|++++|+||++...++.+|++ + |+..+|+.|++.+ .||+|+++..+++++|++|+
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh-hcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcc
Confidence 34689999999999 78999999999999999999983 5 5999999998753 46999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 208 RLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+|+||||+.+|+++|++ +|+++|+|.|++....+.. ...+..++.++++|
T Consensus 206 ~~l~VgDs~~di~aA~~----aG~~~i~v~~~~~~~~~~~-~~~~~~~i~~l~el 255 (261)
T 1yns_A 206 NILFLTDVTREASAAEE----ADVHVAVVVRPGNAGLTDD-EKTYYSLITSFSEL 255 (261)
T ss_dssp GEEEEESCHHHHHHHHH----TTCEEEEECCTTCCCCCHH-HHHHSCEESSGGGC
T ss_pred cEEEEcCCHHHHHHHHH----CCCEEEEEeCCCCCccccc-ccCCCEEECCHHHh
Confidence 99999999999999998 9999999999766543332 23466667777665
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-26 Score=193.36 Aligned_cols=174 Identities=13% Similarity=0.131 Sum_probs=131.9
Q ss_pred CcEEEEecCcccccCHHHHHHHH-HHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSA-VKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~-~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+|||||||+||-+.+..+. +.+++++ |.+. ..+..+.|.+....+. ..+ .
T Consensus 25 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~------g~~~----------~~~~~~~g~~~~~~~~-~~~-~------- 79 (231)
T 3kzx_A 25 PTAVIFDWYNTLIDTSINIDRTTFYQVLDQM------GYKN----------IDLDSIPNSTIPKYLI-TLL-G------- 79 (231)
T ss_dssp CSEEEECTBTTTEETTSSCCHHHHHHHHHHT------TCCC----------CCCTTSCTTTHHHHHH-HHH-G-------
T ss_pred CCEEEECCCCCCcCCchhHHHHHHHHHHHHc------CCCH----------HHHHHHhCccHHHHHH-HHh-C-------
Confidence 58999999999999999999999 8999998 3331 2445555555433221 111 0
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.. .......+++.|.. ........++||+.++|+ ++|++++|
T Consensus 80 -----------------------------~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~g~~~~i 124 (231)
T 3kzx_A 80 -----------------------------KR---WKEATILYENSLEK---SQKSDNFMLNDGAIELLDTLKENNITMAI 124 (231)
T ss_dssp -----------------------------GG---HHHHHHHHHHHHHH---CCSCCCCEECTTHHHHHHHHHHTTCEEEE
T ss_pred -----------------------------ch---HHHHHHHHHHHHhh---hcccccceECcCHHHHHHHHHHCCCeEEE
Confidence 00 01112223333320 234456789999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCC-cEEEEcCChhhHHHhhccCcCCCCc
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL-RLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~-~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
+||.+...++.++++ +|+..+|+.+++++ .+|+|+.+..+++++|++|+ +++||||+.+|+++|++ +|+.
T Consensus 125 ~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~----aG~~ 199 (231)
T 3kzx_A 125 VSNKNGERLRSEIHH-KNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIE----AGCL 199 (231)
T ss_dssp EEEEEHHHHHHHHHH-TTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHH----TTCE
T ss_pred EECCCHHHHHHHHHH-CCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHH----CCCe
Confidence 999999999999996 99999999999864 24999999999999999999 99999999999999998 9999
Q ss_pred EEEEcCCC
Q 024758 233 LYLGNLFR 240 (263)
Q Consensus 233 ~v~v~wGy 240 (263)
+|++..+.
T Consensus 200 ~v~~~~~~ 207 (231)
T 3kzx_A 200 PIKYGSTN 207 (231)
T ss_dssp EEEECC--
T ss_pred EEEECCCC
Confidence 99986553
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-26 Score=190.83 Aligned_cols=190 Identities=13% Similarity=0.150 Sum_probs=135.2
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+||-+.+. +.+++++ |++.. .+..+.+.|.+....+. ..
T Consensus 4 m~k~iiFDlDGTL~d~~~~~~---~~~~~~~------g~~~~--------~~~~~~~~~~~~~~~~~-~g---------- 55 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHLNREES---IRRFKAI------GVADI--------EEMLDPYLQKGLFLDLE-SG---------- 55 (211)
T ss_dssp CCSEEEECSBTTTEEECHHHH---HHHHHHT------TCTTH--------HHHTCC---CCHHHHHH-HS----------
T ss_pred cceEEEEeCCCeeEecchHHH---HHHHHHh------CCchH--------HHHHHHHhCchHHHHHH-cC----------
Confidence 679999999999999998765 5667777 43321 23566777777543321 10
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhc--CCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIY 156 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~la 156 (263)
..+..+... .+.+.++ .+.+ .+.+.|.. ....++||+.++|+ ++|++++
T Consensus 56 ------~~~~~~~~~-------~~~~~~~~~~~~~-------~~~~~~~~-------~~~~~~~~~~~~l~~l~~g~~~~ 108 (211)
T 2i6x_A 56 ------RKSEEEFRT-------ELSRYIGKELTYQ-------QVYDALLG-------FLEEISAEKFDYIDSLRPDYRLF 108 (211)
T ss_dssp ------SSCHHHHHH-------HHHHHHTSCCCHH-------HHHHHHGG-------GEEEECHHHHHHHHHHTTTSEEE
T ss_pred ------CCCHHHHHH-------HHHHHhCCCCCHH-------HHHHHHHH-------hhcccChHHHHHHHHHHcCCeEE
Confidence 112222211 1112222 1111 12222211 12368999999999 4499999
Q ss_pred EEcCCchHHHHHHHHHh------hCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC
Q 024758 157 IVTSNQSRFVETLLREL------AGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~------~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 226 (263)
|+||++...++.+++ . +|+..+|+.+++++ .+|+|+++..+++++|++|++|+||||+.+|+.+|++
T Consensus 109 i~t~~~~~~~~~~~~-~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~-- 185 (211)
T 2i6x_A 109 LLSNTNPYVLDLAMS-PRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAER-- 185 (211)
T ss_dssp EEECCCHHHHHHHTS-TTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHH--
T ss_pred EEeCCCHHHHHHHHh-hhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHH--
Confidence 999999999999998 5 69999999999754 4599999999999999999999999999999999997
Q ss_pred cCCCCcEEEEcCCCCChHHHHhhh
Q 024758 227 ELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 227 ~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
+|+.++++.||....+.|.+.+
T Consensus 186 --aG~~~~~~~~~~~~~~~l~~~l 207 (211)
T 2i6x_A 186 --LGFHTYCPDNGENWIPAITRLL 207 (211)
T ss_dssp --TTCEEECCCTTCCCHHHHHHHH
T ss_pred --cCCEEEEECCHHHHHHHHHHHH
Confidence 9999999999998888776543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=194.94 Aligned_cols=115 Identities=16% Similarity=0.116 Sum_probs=97.9
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
...+|||+.++|+ ++ ++++|+||++...++..+++ +|+..+|+.+++++ .+|+|+++..+++++|++|+++
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHH-cCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence 4589999999999 55 99999999999999999995 99999999999864 4599999999999999999999
Q ss_pred EEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhc
Q 024758 210 HFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMD 260 (263)
Q Consensus 210 l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~ 260 (263)
+||||+. +|+++|++ +|+.+++|.||....+ +.+ .|..+..+++
T Consensus 176 ~~vGD~~~~Di~~a~~----aG~~~~~v~~~~~~~~-~~~--~a~~~~~~~~ 220 (234)
T 3u26_A 176 VYVGDNPVKDCGGSKN----LGMTSILLDRKGEKRE-FWD--KCDFIVSDLR 220 (234)
T ss_dssp EEEESCTTTTHHHHHT----TTCEEEEECSSSTTGG-GGG--GCSEEESSTH
T ss_pred EEEcCCcHHHHHHHHH----cCCEEEEECCCCCccc-ccc--CCCEeeCCHH
Confidence 9999997 99999997 9999999999965443 332 3444444443
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-26 Score=191.44 Aligned_cols=105 Identities=14% Similarity=0.082 Sum_probs=96.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..++||+.++|+ ++| +++|+||++...++.++++ +|+..+|+.+++++ .+|+|+++..+++++|++|++++
T Consensus 85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 162 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRT-FGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV 162 (200)
T ss_dssp CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHH-HTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHh-CCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 469999999999 678 9999999999999999995 99999999998754 45999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
||||+.+|+++|++ +|+++++|.||+...++|.+
T Consensus 163 ~vgD~~~Di~~a~~----aG~~~~~~~~~~~~~~~l~~ 196 (200)
T 3cnh_A 163 MVDDRLQNVQAARA----VGMHAVQCVDAAQLREELAA 196 (200)
T ss_dssp EEESCHHHHHHHHH----TTCEEEECSCHHHHHHHHHH
T ss_pred EeCCCHHHHHHHHH----CCCEEEEECCchhhHHHHHH
Confidence 99999999999997 99999999999887777653
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-26 Score=198.36 Aligned_cols=198 Identities=15% Similarity=0.088 Sum_probs=132.4
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccch-HHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGY-DTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~-~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+|||||||+||.+.+..+.+.+++++ |++.. .......+.++..+|... ...+ ..+..
T Consensus 11 ~k~viFDlDGTL~ds~~~~~~~~~~~~~~~------g~~~~--~~~~~~~~~~~~~~g~~~~~~~~--~~~~~------- 73 (231)
T 2p11_A 11 DIVFLFDCDNTLLDNDHVLADLRAHMMREF------GAQNS--ARYWEIFETLRTELGYADYLGAL--QRYRL------- 73 (231)
T ss_dssp SEEEEECCBTTTBCHHHHHHHHHHHHHHHH------CHHHH--HHHHHHHHHHHHHC-CCCHHHHH--HHHHH-------
T ss_pred CeEEEEcCCCCCEecHHHHHHHHHHHHHHc------CCCcc--hHHHHHHHHHHHhcCchHHHHHH--HHHHh-------
Confidence 479999999999999999999999999998 44311 111111234444455331 1111 10000
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
....++ ....+++.|.. +....++|||+.++|+ ++| +++|
T Consensus 74 ------~~~~~~-------------------------~~~~~~~~~~~-----~~~~~~~~~g~~~~l~~l~~~g-~~~i 116 (231)
T 2p11_A 74 ------EQPRDT-------------------------RLLLMSSFLID-----YPFASRVYPGALNALRHLGARG-PTVI 116 (231)
T ss_dssp ------HCTTCT-------------------------GGGGGHHHHHH-----CCGGGGBCTTHHHHHHHHHTTS-CEEE
T ss_pred ------ccccch-------------------------HHHHHHHHHHH-----HHHhCCcCccHHHHHHHHHhCC-CEEE
Confidence 000000 00112222222 1234589999999999 678 9999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChh---hHHHhhccCcCCCCcEE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLA---TLKNVIKEPELDGWNLY 234 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~---Di~aA~~~~~~Agi~~v 234 (263)
+||++...++.+|++ +|+..+|+.+++. ..+||..+..+++ +++|++|+|||||.+ |+++|++ ||+++|
T Consensus 117 ~Tn~~~~~~~~~l~~-~gl~~~f~~~~~~-~~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~----aG~~~i 188 (231)
T 2p11_A 117 LSDGDVVFQPRKIAR-SGLWDEVEGRVLI-YIHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWG----ARLTTV 188 (231)
T ss_dssp EEECCSSHHHHHHHH-TTHHHHTTTCEEE-ESSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHG----GGEEEE
T ss_pred EeCCCHHHHHHHHHH-cCcHHhcCeeEEe-cCChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHH----cCCeEE
Confidence 999999999999996 9999888876542 1367877777776 789999999999999 9999987 999999
Q ss_pred EEcCCCC--ChHHHHhhh-hHhHHHhhhccc
Q 024758 235 LGNLFRF--LCHILLLYL-YAVALFAKMDVL 262 (263)
Q Consensus 235 ~v~wGy~--~~~~l~~~~-~~~~~~~~~~~~ 262 (263)
+|+||+. ..+++. .. .+..++.++++|
T Consensus 189 ~v~~g~~~~~~~~l~-~~~~~~~~i~~~~el 218 (231)
T 2p11_A 189 FPRQGHYAFDPKEIS-SHPPADVTVERIGDL 218 (231)
T ss_dssp EECCSSSSSCHHHHH-HSCCCSEEESSGGGG
T ss_pred EeCCCCCCCcchhcc-ccCCCceeecCHHHH
Confidence 9999974 444454 33 255556665544
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=185.93 Aligned_cols=177 Identities=16% Similarity=0.146 Sum_probs=131.5
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccc-cchHHHHHHHHHhhcccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVE-TGYDTLLLVRLLLEMRLPSL 79 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig-~G~~~~i~~~~l~~~~~~~~ 79 (263)
|.|+|+|||||||+|+-+.+..+.+.+++++ |++.. ...++.+.| .+....+ +.+.
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~~--~~~~------- 59 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQF------SIPYD--------KEKVREFIFKYSVQDLL--VRVA------- 59 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHHHHHH------TCCCC--------HHHHHHHHHHSCHHHHH--HHHH-------
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHHccccHHHHH--HHhh-------
Confidence 4699999999999999999999988889888 33211 134455555 4432221 1110
Q ss_pred cccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEE
Q 024758 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~la 156 (263)
...+++. +....+...+. +.......++||+.++|+ ++|++++
T Consensus 60 --------------------------~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~~~ 105 (207)
T 2go7_A 60 --------------------------EDRNLDV----EVLNQVRAQSL----AEKNAQVVLMPGAREVLAWADESGIQQF 105 (207)
T ss_dssp --------------------------HHHTCCH----HHHHHHHHHHH----TTCGGGCEECTTHHHHHHHHHHTTCEEE
T ss_pred --------------------------chhhccH----HHHHHHHHHHH----HhccccceeCcCHHHHHHHHHHCCCeEE
Confidence 0001111 11122233332 222345678999999999 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
|+||....... .++. +|+..+|+.+++++ .+|+|+.+..+++++|++++++++|||+.+|+.+|++ +|+.
T Consensus 106 i~s~~~~~~~~-~~~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~----aG~~ 179 (207)
T 2go7_A 106 IYTHKGNNAFT-ILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQN----SGIQ 179 (207)
T ss_dssp EECSSCTHHHH-HHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----HTCE
T ss_pred EEeCCchHHHH-HHHH-cCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHH----CCCe
Confidence 99999999999 9995 99999999998764 3488999999999999999999999999999999997 9999
Q ss_pred EEEEcCCC
Q 024758 233 LYLGNLFR 240 (263)
Q Consensus 233 ~v~v~wGy 240 (263)
++++.||+
T Consensus 180 ~i~~~~~~ 187 (207)
T 2go7_A 180 SINFLEST 187 (207)
T ss_dssp EEESSCCS
T ss_pred EEEEecCC
Confidence 99999997
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-25 Score=194.80 Aligned_cols=100 Identities=14% Similarity=0.160 Sum_probs=85.9
Q ss_pred cCCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhh--C---------CCCCCceEEcC---CCCCcHHHHHHHHhh
Q 024758 136 GANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA--G---------VTITPDRLYGL---GTGPKVNVLKQLQKK 201 (263)
Q Consensus 136 ~~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL~~~~--g---------l~~~f~~v~G~---~~~pkp~~l~~~l~~ 201 (263)
...++|||+.++|+. |++++|+||++...++.+|++ + | +..+|+.++.. ..||+|++++.++++
T Consensus 122 ~~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~-~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~ 199 (253)
T 2g80_A 122 IKAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGY-VQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRD 199 (253)
T ss_dssp CCBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHS-BCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHh-hcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHH
Confidence 346899999999999 999999999999999999995 7 5 44445444321 147999999999999
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcC-CCC
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNL-FRF 241 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~w-Gy~ 241 (263)
+|++|++|+|||||..|+++|++ ||+++|+|+| |+.
T Consensus 200 lg~~p~~~l~vgDs~~di~aA~~----aG~~~i~v~~~~~~ 236 (253)
T 2g80_A 200 IGAKASEVLFLSDNPLELDAAAG----VGIATGLASRPGNA 236 (253)
T ss_dssp HTCCGGGEEEEESCHHHHHHHHT----TTCEEEEECCTTSC
T ss_pred cCCCcccEEEEcCCHHHHHHHHH----cCCEEEEEcCCCCC
Confidence 99999999999999999999997 9999999999 543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-25 Score=182.01 Aligned_cols=175 Identities=16% Similarity=0.187 Sum_probs=126.2
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccc-cchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVE-TGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig-~G~~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+|||||||+||.+.+..+.+.+++++ |++.. .+.++..++ .+..... ..+..
T Consensus 6 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~~~~~~~~~~--~~~~~------- 62 (190)
T 2fi1_A 6 YHDYIWDLGGTLLDNYETSTAAFVETLALY------GITQD--------HDSVYQALKVSTPFAIE--TFAPN------- 62 (190)
T ss_dssp CSEEEECTBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHHHHHHHHHCHHHHHH--HHCTT-------
T ss_pred ccEEEEeCCCCcCCCHHHHHHHHHHHHHHh------CCCCC--------HHHHHHHHccccHHHHH--HHhhh-------
Confidence 589999999999999999999999999988 33311 122333332 2221111 11000
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
.. .....+.+.|.+. +.. ..++||+.++|+ ++|++++|
T Consensus 63 ---------~~-------------------------~~~~~~~~~~~~~----~~~-~~~~~~~~~~l~~l~~~g~~~~i 103 (190)
T 2fi1_A 63 ---------LE-------------------------NFLEKYKENEARE----LEH-PILFEGVSDLLEDISNQGGRHFL 103 (190)
T ss_dssp ---------CT-------------------------THHHHHHHHHHHH----TTS-CCBCTTHHHHHHHHHHTTCEEEE
T ss_pred ---------HH-------------------------HHHHHHHHHHHHh----cCc-CccCcCHHHHHHHHHHCCCcEEE
Confidence 00 0011222333222 222 349999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||++. .++..+++ +|+..+|+.+++++ .+|+|+.+..+++++|++ ++++|||+.+|+++|++ +|+.+
T Consensus 104 ~t~~~~-~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~----aG~~~ 175 (190)
T 2fi1_A 104 VSHRND-QVLEILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQA----AGLDT 175 (190)
T ss_dssp ECSSCT-HHHHHHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHH----TTCEE
T ss_pred EECCcH-HHHHHHHH-cCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHH----cCCeE
Confidence 999875 68889995 99999999999864 349999999999999998 99999999999999997 99999
Q ss_pred EEEcCCCCChHHH
Q 024758 234 YLGNLFRFLCHIL 246 (263)
Q Consensus 234 v~v~wGy~~~~~l 246 (263)
+++.||+...+.|
T Consensus 176 ~~~~~~~~~~~~l 188 (190)
T 2fi1_A 176 HLFTSIVNLRQVL 188 (190)
T ss_dssp EECSCHHHHHHHH
T ss_pred EEECCCCChhhcc
Confidence 9999987554443
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=190.64 Aligned_cols=121 Identities=15% Similarity=0.069 Sum_probs=100.9
Q ss_pred cCCCCcccHHHHHH---hCCC--cEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC--------CCCcHHHHHHHHhhC
Q 024758 136 GANRLYPGVSDALK---LASS--RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--------TGPKVNVLKQLQKKP 202 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~--~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~--------~~pkp~~l~~~l~~l 202 (263)
....+|||+.++|+ ++|+ +++|+||.+...++.++++ +|+..+|+.+++++ .+|||+.+..+++++
T Consensus 139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~l 217 (282)
T 3nuq_A 139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL-LGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKES 217 (282)
T ss_dssp GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHH-HTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHH
T ss_pred hccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHh-CCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHc
Confidence 34689999999999 7899 9999999999999999995 99999999999753 159999999999999
Q ss_pred CCCC-CcEEEEcCChhhHHHhhccCcCCCC-cEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 203 EHQG-LRLHFVEDRLATLKNVIKEPELDGW-NLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 203 ~~~~-~~~l~VGDs~~Di~aA~~~~~~Agi-~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|++| ++|+||||+.+|+.+|++ +|+ .++++..+... +.+.....|+.+.+++++|
T Consensus 218 gi~~~~~~i~vGD~~~Di~~a~~----aG~~~~~~~~~~~~~-~~~~~~~~ad~vi~sl~el 274 (282)
T 3nuq_A 218 GLARYENAYFIDDSGKNIETGIK----LGMKTCIHLVENEVN-EILGQTPEGAIVISDILEL 274 (282)
T ss_dssp TCCCGGGEEEEESCHHHHHHHHH----HTCSEEEEECSCCC-----CCCCTTCEEESSGGGG
T ss_pred CCCCcccEEEEcCCHHHHHHHHH----CCCeEEEEEcCCccc-cccccCCCCCEEeCCHHHH
Confidence 9999 999999999999999998 999 78899888643 3333344555666666654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=181.35 Aligned_cols=181 Identities=17% Similarity=0.101 Sum_probs=131.5
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+|||||||+|+-..+..+.+.+++++ |.+... .+..+.+.|......+ ..+..
T Consensus 3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~--~~~~~------- 60 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEA------GYPISV-------EEMGERFAGMTWKNIL--LQVES------- 60 (229)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCCH-------HHHHHHHTTCCHHHHH--HHHHH-------
T ss_pred CccEEEEcCCCCcCccHHHHHHHHHHHHHHh------CCCCCH-------HHHHHHHhCCCHHHHH--HHHHH-------
Confidence 3599999999999999999988888889888 433210 1233444554433322 11111
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcC--CHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHHhCCCcEEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIV 158 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~~~g~~laI~ 158 (263)
.++. ..+.. ..+.+.|.+.+ .....++||+.++|+....+++|+
T Consensus 61 --------------------------~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~~~i~ 106 (229)
T 2fdr_A 61 --------------------------EASIPLSASLL----DKSEKLLDMRL----ERDVKIIDGVKFALSRLTTPRCIC 106 (229)
T ss_dssp --------------------------HHCCCCCTHHH----HHHHHHHHHHH----HHHCCBCTTHHHHHHHCCSCEEEE
T ss_pred --------------------------HcCCCCCHHHH----HHHHHHHHHHh----hcCCccCcCHHHHHHHhCCCEEEE
Confidence 1111 11111 11222332221 123578999999999323399999
Q ss_pred cCCchHHHHHHHHHhhCCCCCC-ceEEcCC----C--CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 159 TSNQSRFVETLLRELAGVTITP-DRLYGLG----T--GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f-~~v~G~~----~--~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
||.+...++.++++ +|+..+| +.+++.+ . +|||+.+..+++++|++|+++++|||+.+|+++|++ +|+
T Consensus 107 s~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~----aG~ 181 (229)
T 2fdr_A 107 SNSSSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARA----AGM 181 (229)
T ss_dssp ESSCHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----TTC
T ss_pred ECCChhHHHHHHHh-CChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHH----CCC
Confidence 99999999999996 9999999 8888753 5 799999999999999999999999999999999997 999
Q ss_pred cEEEEcCCCCC
Q 024758 232 NLYLGNLFRFL 242 (263)
Q Consensus 232 ~~v~v~wGy~~ 242 (263)
.++++.+|...
T Consensus 182 ~~i~~~~~~~~ 192 (229)
T 2fdr_A 182 RVIGFTGASHT 192 (229)
T ss_dssp EEEEECCSTTC
T ss_pred EEEEEecCCcc
Confidence 99999999864
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-25 Score=188.26 Aligned_cols=104 Identities=12% Similarity=0.101 Sum_probs=96.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .+|+|+++..+++++|++|++|+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKS-AGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL 176 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHT-TTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHH-CCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE
Confidence 689999999999 78999999999999999999995 99999999999865 35999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
||||+.+|+.+|++ +|+.+++|.||.+..+++
T Consensus 177 ~vGD~~~Di~~a~~----~G~~~~~v~~~~~~~~~~ 208 (233)
T 3umb_A 177 FVSSNGWDACGATW----HGFTTFWINRLGHPPEAL 208 (233)
T ss_dssp EEESCHHHHHHHHH----HTCEEEEECTTCCCCCSS
T ss_pred EEeCCHHHHHHHHH----cCCEEEEEcCCCCCchhc
Confidence 99999999999998 999999999998776655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=189.51 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=94.6
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..++||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .+|+|+++..+++++|++|++++
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 172 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL 172 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-cChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 579999999998 78999999999999999999995 99999999999865 35999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHH
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHI 245 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~ 245 (263)
||||+.+|+.+|++ +|+.+++|.||++..++
T Consensus 173 ~iGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~ 203 (232)
T 1zrn_A 173 FVASNAWDATGARY----FGFPTCWINRTGNVFEE 203 (232)
T ss_dssp EEESCHHHHHHHHH----HTCCEEEECTTCCCCCS
T ss_pred EEeCCHHHHHHHHH----cCCEEEEEcCCCCCccc
Confidence 99999999999998 99999999999765443
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-25 Score=189.16 Aligned_cols=117 Identities=11% Similarity=0.005 Sum_probs=91.2
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHH---HhhCCCCCC
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQL---QKKPEHQGL 207 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~---l~~l~~~~~ 207 (263)
...+|||+.++|+ ++|++++|+||.+...++..++. +..+|+.+++++ .||+|+++..+ ++++|++|+
T Consensus 97 ~~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~---l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~ 173 (240)
T 3smv_A 97 NWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAK---LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKK 173 (240)
T ss_dssp GCCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTT---TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGG
T ss_pred cCCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHh---cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCch
Confidence 4689999999999 44899999999999999999884 557899999864 45999998888 889999999
Q ss_pred cEEEEcCCh-hhHHHhhccCcCCCCcEEEEc-----CCCCChHHHHhhhhHhHHHhhhc
Q 024758 208 RLHFVEDRL-ATLKNVIKEPELDGWNLYLGN-----LFRFLCHILLLYLYAVALFAKMD 260 (263)
Q Consensus 208 ~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~-----wGy~~~~~l~~~~~~~~~~~~~~ 260 (263)
+|+||||+. +|+++|++ +|+.++++. |||+...+-.....|..+..+++
T Consensus 174 ~~~~vGD~~~~Di~~a~~----aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~ 228 (240)
T 3smv_A 174 DILHTAESLYHDHIPAND----AGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMG 228 (240)
T ss_dssp GEEEEESCTTTTHHHHHH----HTCEEEEECTTCC-------CCCSSCCCCSEEESSHH
T ss_pred hEEEECCCchhhhHHHHH----cCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHH
Confidence 999999996 99999998 999999998 77766543332334444444443
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=188.77 Aligned_cols=105 Identities=20% Similarity=0.142 Sum_probs=95.5
Q ss_pred ccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC--ceEEcCCC---CCcHHHHHHHHhhCCCCC
Q 024758 135 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGT---GPKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f--~~v~G~~~---~pkp~~l~~~l~~l~~~~ 206 (263)
.....++||+.++|+ ++|++++|+||++...++.++++ +|+..+| +.+++.+. +|+|+.+..+++++|+++
T Consensus 66 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~ 144 (205)
T 3m9l_A 66 AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEA-IGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSP 144 (205)
T ss_dssp EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCG
T ss_pred hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHH-cCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCH
Confidence 345689999999999 78999999999999999999995 9999999 88998763 499999999999999999
Q ss_pred CcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 207 ~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
++|+||||+.+|+++|++ +|+++|+|.+|.....
T Consensus 145 ~~~i~iGD~~~Di~~a~~----aG~~~i~v~~~~~~~~ 178 (205)
T 3m9l_A 145 SRMVMVGDYRFDLDCGRA----AGTRTVLVNLPDNPWP 178 (205)
T ss_dssp GGEEEEESSHHHHHHHHH----HTCEEEECSSSSCSCG
T ss_pred HHEEEECCCHHHHHHHHH----cCCEEEEEeCCCCccc
Confidence 999999999999999998 9999999999986443
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=191.14 Aligned_cols=195 Identities=11% Similarity=0.013 Sum_probs=136.4
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.|+|+|||||||+||-+.+..+.+.++++++. .+. ...+....|......+ +.+..
T Consensus 35 ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-----~~~---------~~~~~~~~G~~~~~~~--~~~~~-------- 90 (275)
T 2qlt_A 35 INAALFDVDGTIIISQPAIAAFWRDFGKDKPY-----FDA---------EHVIHISHGWRTYDAI--AKFAP-------- 90 (275)
T ss_dssp ESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-----CCH---------HHHHHHCTTCCHHHHH--HHHCG--------
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-----CCH---------HHHHHHhcCCCHHHHH--HHHhc--------
Confidence 48999999999999999998888887777720 121 1122334454433221 11110
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hC-CCcEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA-SSRIYI 157 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~-g~~laI 157 (263)
. ...++.. ..+.+.|.+ .+.....++||+.++|+ ++ |++++|
T Consensus 91 -----~---------------------~~~~~~~----~~~~~~~~~----~~~~~~~~~~g~~~~L~~l~~~~g~~l~i 136 (275)
T 2qlt_A 91 -----D---------------------FADEEYV----NKLEGEIPE----KYGEHSIEVPGAVKLCNALNALPKEKWAV 136 (275)
T ss_dssp -----G---------------------GCCHHHH----HHHHHTHHH----HHCTTCEECTTHHHHHHHHHTSCGGGEEE
T ss_pred -----c---------------------CCcHHHH----HHHHHHHHH----HHhcCCCcCcCHHHHHHHHHhccCCeEEE
Confidence 0 0011111 112222222 22344678999999999 56 899999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCC-------CCCcEEEEcCChhhHHHhhccC
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEH-------QGLRLHFVEDRLATLKNVIKEP 226 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~-------~~~~~l~VGDs~~Di~aA~~~~ 226 (263)
+||++...++..+++ +|+. +|+.+++++ .+|+|+.+..+++++|+ +|++|++|||+.+|+++|++
T Consensus 137 ~T~~~~~~~~~~l~~-~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~-- 212 (275)
T 2qlt_A 137 ATSGTRDMAKKWFDI-LKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKA-- 212 (275)
T ss_dssp ECSSCHHHHHHHHHH-HTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHH--
T ss_pred EeCCCHHHHHHHHHH-cCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHH--
Confidence 999999999999995 9997 478888754 24999999999999999 99999999999999999997
Q ss_pred cCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 227 ELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 227 ~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
||+.+++|.||++ .+++. ...|..++.++++|
T Consensus 213 --AG~~~i~v~~~~~-~~~~~-~~~ad~v~~~~~el 244 (275)
T 2qlt_A 213 --AGCKIVGIATTFD-LDFLK-EKGCDIIVKNHESI 244 (275)
T ss_dssp --TTCEEEEESSSSC-HHHHT-TSSCSEEESSGGGE
T ss_pred --cCCEEEEECCCCC-HHHHh-hCCCCEEECChHHc
Confidence 9999999999965 44443 23455555555543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-25 Score=188.58 Aligned_cols=99 Identities=15% Similarity=0.137 Sum_probs=92.7
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .+|+|+++..+++++|++|++|+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 182 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC 182 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHh-cCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 579999999998 78999999999999999999996 99999999999864 35999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
||||+.+|+++|++ +|+.+++|.||+.
T Consensus 183 ~iGD~~~Di~~a~~----aG~~~~~v~~~~~ 209 (240)
T 2no4_A 183 FVSSNAWDLGGAGK----FGFNTVRINRQGN 209 (240)
T ss_dssp EEESCHHHHHHHHH----HTCEEEEECTTCC
T ss_pred EEeCCHHHHHHHHH----CCCEEEEECCCCC
Confidence 99999999999998 9999999999976
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.7e-25 Score=185.95 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=95.5
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
...++||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.+++++ .+|+|+.+..+++++|++|+++
T Consensus 94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGN-SGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHH-CCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 4689999999998 78999999999999999999996 99999999999865 3499999999999999999999
Q ss_pred EEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHH
Q 024758 210 HFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHI 245 (263)
Q Consensus 210 l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~ 245 (263)
+||||+.+|+++|++ +|+.+++|.||.+..+.
T Consensus 173 ~~iGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~ 204 (230)
T 3um9_A 173 LFVSCNSWDATGAKY----FGYPVCWINRSNGVFDQ 204 (230)
T ss_dssp EEEESCHHHHHHHHH----HTCCEEEECTTSCCCCC
T ss_pred EEEeCCHHHHHHHHH----CCCEEEEEeCCCCcccc
Confidence 999999999999998 99999999999766544
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=9e-25 Score=185.74 Aligned_cols=94 Identities=13% Similarity=-0.002 Sum_probs=83.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCC-CcE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQG-LRL 209 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~-~~~ 209 (263)
.++|||+.++|+ ++|++++|+||+++..+..+ .+ .+|+.|+|++ .||+|+++..+++++|+.+ ++|
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~----~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 108 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPL----AA--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGC 108 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH----HT--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh----cC--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccE
Confidence 478999999999 78999999999999887332 44 5789888865 3599999999999999975 899
Q ss_pred EEEcCChhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 210 HFVEDRLATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 210 l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
+|||||.+||++|++ ||+++|+|+||++
T Consensus 109 v~VGDs~~Di~aA~~----aG~~~i~v~~g~~ 136 (196)
T 2oda_A 109 VLISGDPRLLQSGLN----AGLWTIGLASCGP 136 (196)
T ss_dssp EEEESCHHHHHHHHH----HTCEEEEESSSST
T ss_pred EEEeCCHHHHHHHHH----CCCEEEEEccCCc
Confidence 999999999999998 9999999999987
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-25 Score=184.66 Aligned_cols=98 Identities=13% Similarity=0.126 Sum_probs=89.5
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..+|||+.+ |+ ++ ++++|+||++...++.++++ +|+..+|+.+++++ .+|+|+++..+++++| |++++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~ 147 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLER-NGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF 147 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHH-CCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence 579999999 88 56 99999999999999999995 99999999999864 3599999999999999 99999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
||||+.+|+++|++ +|+++++|.||++..+
T Consensus 148 ~vGD~~~Di~~a~~----aG~~~~~~~~~~~~~~ 177 (201)
T 2w43_A 148 LVSSNAFDVIGAKN----AGMRSIFVNRKNTIVD 177 (201)
T ss_dssp EEESCHHHHHHHHH----TTCEEEEECSSSCCCC
T ss_pred EEeCCHHHhHHHHH----CCCEEEEECCCCCCcc
Confidence 99999999999998 9999999999877544
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-24 Score=186.99 Aligned_cols=96 Identities=14% Similarity=0.163 Sum_probs=89.9
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
...+|||+.++|+ + |++++|+||++...++.++++ +|+..+|+.+++++ .+|+|+.+..+++++|++|++|+
T Consensus 91 ~~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 168 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168 (253)
T ss_dssp SCCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred cCCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHH-CCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 3589999999999 6 999999999999999999995 99999999999865 35999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcC
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~w 238 (263)
||||+.+|+++|++ +|+.++++.|
T Consensus 169 ~vGD~~~Di~~a~~----aG~~~~~~~~ 192 (253)
T 1qq5_A 169 FVSSNGFDVGGAKN----FGFSVARVAR 192 (253)
T ss_dssp EEESCHHHHHHHHH----HTCEEEEECC
T ss_pred EEeCChhhHHHHHH----CCCEEEEECC
Confidence 99999999999998 9999999999
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-24 Score=185.20 Aligned_cols=94 Identities=16% Similarity=0.084 Sum_probs=80.2
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
..++|||+.++|+ ++|++++|+||++. .++.+|++ +|+..+|+.+++++ .||+|+++..+++++|++|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~--- 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEK-FDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA--- 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHH-HTCGGGCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHh-cCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence 3579999999999 67999999999987 48899995 99999999999875 2488899999999999988
Q ss_pred EEEcCChh-hHHHhhccCcCCCCcEEEEcCC
Q 024758 210 HFVEDRLA-TLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 210 l~VGDs~~-Di~aA~~~~~~Agi~~v~v~wG 239 (263)
+||||+.+ |+++|++ +|+++++|.++
T Consensus 168 ~~vgD~~~~Di~~a~~----aG~~~i~v~~~ 194 (220)
T 2zg6_A 168 VHVGDIYELDYIGAKR----SYVDPILLDRY 194 (220)
T ss_dssp EEEESSCCCCCCCSSS----CSEEEEEBCTT
T ss_pred EEEcCCchHhHHHHHH----CCCeEEEECCC
Confidence 99999999 9999987 99999999876
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-24 Score=181.28 Aligned_cols=105 Identities=11% Similarity=0.135 Sum_probs=91.6
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..++||+.++|+ ++|++++|+||++...++.++++.+|+..+|+.+++++ .+|+|+++..+++++|+++++++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 169 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 478999999999 68999999999999888777762268888899999854 45999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
||||+.+|+.+|++ +|+.++++.||....+.|
T Consensus 170 ~vgD~~~Di~~a~~----aG~~~~~~~~~~~~~~~l 201 (206)
T 2b0c_A 170 FFDDNADNIEGANQ----LGITSILVKDKTTIPDYF 201 (206)
T ss_dssp EEESCHHHHHHHHT----TTCEEEECCSTTHHHHHH
T ss_pred EeCCCHHHHHHHHH----cCCeEEEecCCchHHHHH
Confidence 99999999999997 999999999987544444
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-23 Score=179.33 Aligned_cols=115 Identities=13% Similarity=0.138 Sum_probs=90.2
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC--CCceEE---------cCCC-------CCcHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLY---------GLGT-------GPKVNVL 195 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~--~f~~v~---------G~~~-------~pkp~~l 195 (263)
..+++||+.++|+ ++|++++|+||++...++.++++ +|+.. +|+.++ |.+. +|||+++
T Consensus 84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 162 (225)
T 1nnl_A 84 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 162 (225)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH-cCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence 3579999999999 78999999999999999999995 99974 776653 4332 3799999
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
..+++++|+ ++|+||||+.+|+.+|++ ||+ +|++ |++...+.. ...+..++.++.+|
T Consensus 163 ~~~~~~~~~--~~~~~vGDs~~Di~~a~~----ag~-~i~~--~~~~~~~~~-~~~~~~~~~~~~el 219 (225)
T 1nnl_A 163 KLLKEKFHF--KKIIMIGDGATDMEACPP----ADA-FIGF--GGNVIRQQV-KDNAKWYITDFVEL 219 (225)
T ss_dssp HHHHHHHCC--SCEEEEESSHHHHTTTTT----SSE-EEEE--CSSCCCHHH-HHHCSEEESCGGGG
T ss_pred HHHHHHcCC--CcEEEEeCcHHhHHHHHh----CCe-EEEe--cCccccHHH-HhcCCeeecCHHHH
Confidence 999999998 789999999999999987 899 6554 554433333 23455566666554
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.2e-23 Score=176.29 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=91.5
Q ss_pred CCcccHHHHHH--hCCCcEEEEcCCchHHHHHHH------HHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCC
Q 024758 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLL------RELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 139 ~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL------~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~ 206 (263)
.++||+.++|+ ++.++++|+||.+...++.++ +. +|+..+|+.+++++ .||+|+++..+++++|++|
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRT-FKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTT-BCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhcc-CCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 57899999999 333999999999999998666 64 78889999998864 4599999999999999999
Q ss_pred CcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 207 ~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
++|+||||+.+|+++|++ +|+.+++|.+|....+.|.
T Consensus 191 ~~~~~vGD~~~Di~~a~~----aG~~~i~v~~~~~~k~~L~ 227 (229)
T 4dcc_A 191 KETFFIDDSEINCKVAQE----LGISTYTPKAGEDWSHLFR 227 (229)
T ss_dssp GGEEEECSCHHHHHHHHH----TTCEEECCCTTCCGGGGGC
T ss_pred HHeEEECCCHHHHHHHHH----cCCEEEEECCHHHHHHHhh
Confidence 999999999999999998 9999999999977665543
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-23 Score=173.31 Aligned_cols=107 Identities=20% Similarity=0.064 Sum_probs=95.4
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~-~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
..+++||+.++|+ ++|++++|+||++ ...++.++++ +|+..+|+.+++.. +|||+.+..+++++|++|++|+||
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~-~gl~~~f~~~~~~~-~~k~~~~~~~~~~~~~~~~~~~~i 143 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLEL-FDLFRYFVHREIYP-GSKITHFERLQQKTGIPFSQMIFF 143 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHH-TTCTTTEEEEEESS-SCHHHHHHHHHHHHCCCGGGEEEE
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHH-cCcHhhcceeEEEe-CchHHHHHHHHHHcCCChHHEEEE
Confidence 4579999999999 7899999999999 6999999996 99999999876543 589999999999999999999999
Q ss_pred cCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 213 EDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 213 GDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
||+.+|+++|++ +|+++|+|+||++ .+++.+.+
T Consensus 144 gD~~~Di~~a~~----aG~~~i~v~~g~~-~~~~~~~l 176 (187)
T 2wm8_A 144 DDERRNIVDVSK----LGVTCIHIQNGMN-LQTLSQGL 176 (187)
T ss_dssp ESCHHHHHHHHT----TTCEEEECSSSCC-HHHHHHHH
T ss_pred eCCccChHHHHH----cCCEEEEECCCCC-hHHHHHHH
Confidence 999999999997 9999999999986 45565554
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.1e-23 Score=191.71 Aligned_cols=108 Identities=17% Similarity=0.055 Sum_probs=89.6
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCC--chHHHHHHHHH-hhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSN--QSRFVETLLRE-LAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK--~~~~a~~iL~~-~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~ 207 (263)
..+|||+.++|+ ++|++++|+||. .....+..+.. ..|+..+|+.|++++ .||+|++++.+++++|++|+
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~ 178 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPS 178 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCChh
Confidence 589999999998 889999999998 22222223332 126788999999864 46999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 208 RLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+|+||||+.+|+++|++ +|+++++..+|+...+.+.+.
T Consensus 179 ~~~~v~D~~~di~~a~~----aG~~~~~~~~~~~~~~~l~~~ 216 (555)
T 3i28_A 179 EVVFLDDIGANLKPARD----LGMVTILVQDTDTALKELEKV 216 (555)
T ss_dssp GEEEEESCHHHHHHHHH----HTCEEEECSSHHHHHHHHHHH
T ss_pred HEEEECCcHHHHHHHHH----cCCEEEEECCCccHHHHHHhh
Confidence 99999999999999998 999999999998777766554
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.3e-24 Score=178.43 Aligned_cols=91 Identities=14% Similarity=0.116 Sum_probs=80.5
Q ss_pred cCCCCcccHHHHHH---hC-CCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 136 GANRLYPGVSDALK---LA-SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~-g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
...++|||+.++|+ ++ |++++|+||++...++.+|++ +|+ |+.++|+ .+++++|++|++|+|
T Consensus 70 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~gl---f~~i~~~----------~~~~~~~~~~~~~~~ 135 (193)
T 2i7d_A 70 LDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEK-YRW---VEQHLGP----------QFVERIILTRDKTVV 135 (193)
T ss_dssp TTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHH-HHH---HHHHHCH----------HHHTTEEECSCGGGB
T ss_pred ccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHH-hCc---hhhhcCH----------HHHHHcCCCcccEEE
Confidence 35689999999999 56 899999999999999999995 998 7888764 278899999999999
Q ss_pred EcCChhh----HHHhh-ccCcCCCCcEEEEcCCCCChH
Q 024758 212 VEDRLAT----LKNVI-KEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 212 VGDs~~D----i~aA~-~~~~~Agi~~v~v~wGy~~~~ 244 (263)
|||+..| +++|+ + +|+++|+++++++...
T Consensus 136 vgDs~~dD~~~i~~A~~~----aG~~~i~~~~~~~~~~ 169 (193)
T 2i7d_A 136 LGDLLIDDKDTVRGQEET----PSWEHILFTCCHNRHL 169 (193)
T ss_dssp CCSEEEESSSCCCSSCSS----CSSEEEEECCGGGTTC
T ss_pred ECCchhhCcHHHhhcccc----cccceEEEEeccCccc
Confidence 9999999 99887 6 9999999999887553
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-22 Score=168.81 Aligned_cols=92 Identities=11% Similarity=0.042 Sum_probs=81.1
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC-ceEEc-CCC------CCcHHHHHHHHhhCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYG-LGT------GPKVNVLKQLQKKPEHQ 205 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f-~~v~G-~~~------~pkp~~l~~~l~~l~~~ 205 (263)
..++|||+.++|+ ++ ++++|+||++...++.++++ +|+..+| +.++. .+. +|+|+.+..++++++..
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~ 144 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHH-cCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhc
Confidence 4689999999999 55 99999999999999999995 9999999 45554 332 29999999999999999
Q ss_pred CCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 206 GLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 206 ~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
|++|+||||+.+|+.+|++ +|+.++
T Consensus 145 ~~~~~~iGD~~~Di~~a~~----aG~~~~ 169 (206)
T 1rku_A 145 YYRVIAAGDSYNDTTMLSE----AHAGIL 169 (206)
T ss_dssp TCEEEEEECSSTTHHHHHH----SSEEEE
T ss_pred CCEEEEEeCChhhHHHHHh----cCccEE
Confidence 9999999999999999997 899754
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-23 Score=176.89 Aligned_cols=88 Identities=14% Similarity=0.075 Sum_probs=79.5
Q ss_pred CCCCcccHHHHHH---hC-CCcEEEEcCCchHHHHHHHHHhhCCCC-CCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 137 ANRLYPGVSDALK---LA-SSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~-g~~laI~TnK~~~~a~~iL~~~~gl~~-~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
..++|||+.++|+ ++ |++++|+||+++..++.+|++ +|+.. ||+ ..++++++++|++|+|
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~f~--------------~~~~~~l~~~~~~~~~ 137 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEK-YAWVEKYFG--------------PDFLEQIVLTRDKTVV 137 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHH-HHHHHHHHC--------------GGGGGGEEECSCSTTS
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHH-hchHHHhch--------------HHHHHHhccCCccEEE
Confidence 4689999999999 67 999999999999999999995 99987 886 5678889999999999
Q ss_pred EcCChhh----HHHhh-ccCcCCCCcEEEEcCCCCCh
Q 024758 212 VEDRLAT----LKNVI-KEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 212 VGDs~~D----i~aA~-~~~~~Agi~~v~v~wGy~~~ 243 (263)
|||+..| +++|+ + ||+++|++.|+++..
T Consensus 138 vgDs~~dD~~~~~~a~~~----aG~~~i~~~~~~~~~ 170 (197)
T 1q92_A 138 SADLLIDDRPDITGAEPT----PSWEHVLFTACHNQH 170 (197)
T ss_dssp CCSEEEESCSCCCCSCSS----CSSEEEEECCTTTTT
T ss_pred ECcccccCCchhhhcccC----CCceEEEecCccccc
Confidence 9999999 99887 6 999999999998764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=9.1e-22 Score=165.32 Aligned_cols=102 Identities=10% Similarity=-0.012 Sum_probs=88.8
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC-----------C---CCCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-----------G---TGPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~-----------~---~~pkp~~l~~~l~ 200 (263)
.+++||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.+++. + .+|||+.+..+++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~ 152 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDL-LHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQR 152 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH-cCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHH
Confidence 679999999999 78999999999999999999996 9999999988632 1 2499999999999
Q ss_pred hCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 201 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
++|++|++++||||+.+|+.+|++ +|+.++ | +..+++.+.
T Consensus 153 ~~g~~~~~~i~vGDs~~Di~~a~~----aG~~~~---~--~~~~~l~~~ 192 (217)
T 3m1y_A 153 LLNISKTNTLVVGDGANDLSMFKH----AHIKIA---F--NAKEVLKQH 192 (217)
T ss_dssp HHTCCSTTEEEEECSGGGHHHHTT----CSEEEE---E--SCCHHHHTT
T ss_pred HcCCCHhHEEEEeCCHHHHHHHHH----CCCeEE---E--CccHHHHHh
Confidence 999999999999999999999987 898653 3 566767654
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-23 Score=177.65 Aligned_cols=121 Identities=12% Similarity=0.063 Sum_probs=95.2
Q ss_pred cCCCCcccHHHHHH---hCCCcEE---------------------------------EEcCCchHHHHHHHHHhhC-CCC
Q 024758 136 GANRLYPGVSDALK---LASSRIY---------------------------------IVTSNQSRFVETLLRELAG-VTI 178 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~la---------------------------------I~TnK~~~~a~~iL~~~~g-l~~ 178 (263)
....++||+.++|+ ++|++++ |+||++ .....+++. +| +..
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~-~~~~~~ 161 (250)
T 2c4n_A 84 GKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPA-CGALCA 161 (250)
T ss_dssp CCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBC-HHHHHH
T ss_pred CCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeec-chHHHH
Confidence 34578999999998 7899999 999987 444444442 45 445
Q ss_pred CCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh-hhhH
Q 024758 179 TPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRFLCHILLL-YLYA 252 (263)
Q Consensus 179 ~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~-~~~~ 252 (263)
+|+.+.+.+ .+|||+.+..+++++|+++++|++|||+ .+|+++|++ ||+.+++|.||++..+++.+ ...|
T Consensus 162 ~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~----aG~~~~~v~~g~~~~~~~~~~~~~~ 237 (250)
T 2c4n_A 162 GIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ----AGLETILVLSGVSSLDDIDSMPFRP 237 (250)
T ss_dssp HHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH----TTCEEEEESSSSCCGGGGSSCSSCC
T ss_pred HHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHH----cCCeEEEECCCCCChhhhhhcCCCC
Confidence 566666654 3499999999999999999999999999 699999997 99999999999988776642 2456
Q ss_pred hHHHhhhccc
Q 024758 253 VALFAKMDVL 262 (263)
Q Consensus 253 ~~~~~~~~~~ 262 (263)
..++.++++|
T Consensus 238 ~~v~~~~~el 247 (250)
T 2c4n_A 238 SWIYPSVAEI 247 (250)
T ss_dssp SEEESSGGGC
T ss_pred CEEECCHHHh
Confidence 6666666654
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.2e-20 Score=157.38 Aligned_cols=92 Identities=15% Similarity=0.008 Sum_probs=77.9
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEc------------CCC-C-CcHHHHHHHHhh
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG------------LGT-G-PKVNVLKQLQKK 201 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G------------~~~-~-pkp~~l~~~l~~ 201 (263)
.++||+.++|+ ++|++++|+||++...++.++++ +|++.+|...+. ... + +|++.+..++++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARA-FGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 58999999998 78999999999999999999996 999765543221 111 1 688999999999
Q ss_pred CC---CCCCcEEEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 202 PE---HQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 202 l~---~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
+| ++|++|+|||||.+|+.++++ ||+.++.
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~~~~~~----ag~~~~~ 203 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDVPLLEA----VTRPIAA 203 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGHHHHHH----SSEEEEE
T ss_pred cCCCcCchhheEEEeCCHhhHHHHHh----CCCeEEE
Confidence 99 999999999999999999997 8987643
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-20 Score=156.15 Aligned_cols=86 Identities=14% Similarity=0.071 Sum_probs=66.8
Q ss_pred ccCCCCcccHHHHHH--hCCCcEEEEcCC---ch--HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCC
Q 024758 135 IGANRLYPGVSDALK--LASSRIYIVTSN---QS--RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 135 ~~~~~lypGv~e~L~--~~g~~laI~TnK---~~--~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~ 207 (263)
....++|||+.++|+ +++++++|+||+ ++ ......|++++|+..+|+.|++++.. .+ +
T Consensus 65 ~~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-----------~l----~ 129 (180)
T 3bwv_A 65 FRNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-----------II----L 129 (180)
T ss_dssp GGSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-----------GB----C
T ss_pred hccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-----------ee----c
Confidence 345789999999999 556999999999 53 23355566457888889999987631 12 6
Q ss_pred cEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 208 RLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
+|+|||||.+++..| || ++|++.|+|+.
T Consensus 130 ~~l~ieDs~~~i~~a------aG-~~i~~~~~~~~ 157 (180)
T 3bwv_A 130 ADYLIDDNPKQLEIF------EG-KSIMFTASHNV 157 (180)
T ss_dssp CSEEEESCHHHHHHC------SS-EEEEECCGGGT
T ss_pred ccEEecCCcchHHHh------CC-CeEEeCCCccc
Confidence 789999999999532 89 99999999863
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.7e-21 Score=166.18 Aligned_cols=96 Identities=13% Similarity=-0.024 Sum_probs=79.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEE-cC------CCCCcHHHHHHHHhhCCCCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY-GL------GTGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~-G~------~~~pkp~~l~~~l~~l~~~~~ 207 (263)
..++||+.++|+ ++|++++|+||++...++.+++. +..+|+.++ |. ..||+|+++.++++++|+
T Consensus 87 ~~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~---l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~--- 160 (211)
T 2b82_A 87 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT---LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI--- 160 (211)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH---HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE---
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH---HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC---
Confidence 357899999998 78999999999988776666663 444566552 21 245899999999999998
Q ss_pred cEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 208 RLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
|+||||+.+|+++|++ ||+++|+|.||+++..
T Consensus 161 -~l~VGDs~~Di~aA~~----aG~~~i~v~~g~~~~~ 192 (211)
T 2b82_A 161 -RIFYGDSDNDITAARD----VGARGIRILRASNSTY 192 (211)
T ss_dssp -EEEEESSHHHHHHHHH----TTCEEEECCCCTTCSS
T ss_pred -EEEEECCHHHHHHHHH----CCCeEEEEecCCCCcc
Confidence 9999999999999998 9999999999998654
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.82 E-value=3.7e-21 Score=171.67 Aligned_cols=91 Identities=14% Similarity=0.114 Sum_probs=77.4
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEE
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
...+++||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++. +| ..++++++.. ++|+||
T Consensus 160 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~---~K----~~~~~~l~~~-~~~~~v 230 (287)
T 3a1c_A 160 VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAEVLPH---QK----SEEVKKLQAK-EVVAFV 230 (287)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCTT---CH----HHHHHHHTTT-CCEEEE
T ss_pred eccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCceeeeecChH---HH----HHHHHHHhcC-CeEEEE
Confidence 34689999999999 78999999999999999999996 9999888877632 34 5677788888 999999
Q ss_pred cCChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 213 EDRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 213 GDs~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
||+.+|+.+|++ ||+. |.||++.
T Consensus 231 GDs~~Di~~a~~----ag~~---v~~~~~~ 253 (287)
T 3a1c_A 231 GDGINDAPALAQ----ADLG---IAVGSGS 253 (287)
T ss_dssp ECTTTCHHHHHH----SSEE---EEECCCS
T ss_pred ECCHHHHHHHHH----CCee---EEeCCCC
Confidence 999999999997 8985 5667643
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-22 Score=176.55 Aligned_cols=121 Identities=12% Similarity=0.017 Sum_probs=95.4
Q ss_pred cCCCCcccHHHHHH--hCCCcEEEEcCCchHH--HHH-HHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCC
Q 024758 136 GANRLYPGVSDALK--LASSRIYIVTSNQSRF--VET-LLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 136 ~~~~lypGv~e~L~--~~g~~laI~TnK~~~~--a~~-iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~ 206 (263)
....+|||+.++|+ ++|+++ |+||++... ... +++ ..++..+|+.+++.+ .||+|+++..+++++|++|
T Consensus 123 ~~~~~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~-~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~ 200 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPG-AGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEK 200 (264)
T ss_dssp CTTCCHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEEC-HHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCG
T ss_pred CCCcCHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccC-CcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCH
Confidence 34579999999999 889987 999998743 222 233 244556778888765 3599999999999999999
Q ss_pred CcEEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhccc
Q 024758 207 LRLHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDVL 262 (263)
Q Consensus 207 ~~~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~~ 262 (263)
++++||||+ .+|+++|++ +|+++|+|.||++..+++.+. ..|..+++++.+|
T Consensus 201 ~~~~~vGD~~~~Di~~a~~----aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el 254 (264)
T 1yv9_A 201 EQVIMVGDNYETDIQSGIQ----NGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 254 (264)
T ss_dssp GGEEEEESCTTTHHHHHHH----HTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred HHEEEECCCcHHHHHHHHH----cCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHH
Confidence 999999999 599999998 999999999999887666532 2566666666654
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.82 E-value=5.7e-21 Score=164.75 Aligned_cols=93 Identities=12% Similarity=0.193 Sum_probs=78.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC------------CCCcHHHHH------
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------------TGPKVNVLK------ 196 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~------------~~pkp~~l~------ 196 (263)
.++|||+.++|+ ++|++++|+||++...++.+++ |+..+ +.|++.+ .+|+|+++.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~---~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~ 151 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE---GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC 151 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT---TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh---cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCc
Confidence 589999999999 7899999999999999999886 66665 7888754 235666433
Q ss_pred --HHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCC
Q 024758 197 --QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 197 --~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
.+++++++++++++||||+.+|+.+|++ ||+.++ .||+
T Consensus 152 K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~----aG~~~~--~~~~ 191 (236)
T 2fea_A 152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKL----SDLCFA--RDYL 191 (236)
T ss_dssp HHHHHHHHCCTTCEEEEEECCGGGHHHHHT----CSEEEE--CHHH
T ss_pred HHHHHHHHhccCCeEEEEeCChHHHHHHHh----CCeeee--chHH
Confidence 8899999999999999999999999997 999885 4664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-21 Score=160.58 Aligned_cols=117 Identities=8% Similarity=0.050 Sum_probs=87.9
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC--CCCc--eEEcCC--------CCCcHHHHHHH-Hhh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT--ITPD--RLYGLG--------TGPKVNVLKQL-QKK 201 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~--~~f~--~v~G~~--------~~pkp~~l~~~-l~~ 201 (263)
..++||+.++|+ ++|++++|+||++...++.++++ +|+. .+|. .+++.+ .+|+|....++ .+.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADY-LNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-cCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 358999999999 88999999999999999999995 9994 3444 333332 22555544444 455
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+|+++++++||||+.+|+.+++ +|+.++++.||.++..+... ..|..+..++++
T Consensus 160 ~~~~~~~~~~vGD~~~Di~~~~-----~G~~~~~v~~~~~~~~~~~~-~~ad~v~~~~~e 213 (219)
T 3kd3_A 160 KGLIDGEVIAIGDGYTDYQLYE-----KGYATKFIAYMEHIEREKVI-NLSKYVARNVAE 213 (219)
T ss_dssp GGGCCSEEEEEESSHHHHHHHH-----HTSCSEEEEECSSCCCHHHH-HHCSEEESSHHH
T ss_pred hCCCCCCEEEEECCHhHHHHHh-----CCCCcEEEeccCccccHHHH-hhcceeeCCHHH
Confidence 6999999999999999999984 79999999999887665542 234444444443
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-20 Score=169.16 Aligned_cols=103 Identities=13% Similarity=0.040 Sum_probs=87.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC-----------C---CCCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-----------G---TGPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~-----------~---~~pkp~~l~~~l~ 200 (263)
.+++||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.+++. + .+|||+++..+++
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~-lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKAR-YQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHH-cCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 479999999999 89999999999999999999996 9999999877531 1 1389999999999
Q ss_pred hCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 201 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
++|++|++++||||+.+|+.+|++ ||+ +|.|+ ....+.+..
T Consensus 257 ~lgv~~~~~i~VGDs~~Di~aa~~----AG~---~va~~--~~~~~~~~a 297 (317)
T 4eze_A 257 RLNIATENIIACGDGANDLPMLEH----AGT---GIAWK--AKPVVREKI 297 (317)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----SSE---EEEES--CCHHHHHHC
T ss_pred HcCCCcceEEEEeCCHHHHHHHHH----CCC---eEEeC--CCHHHHHhc
Confidence 999999999999999999999997 896 55564 344454443
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.5e-20 Score=151.49 Aligned_cols=109 Identities=15% Similarity=0.069 Sum_probs=86.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcC-C-------------CCCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-G-------------TGPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~-~-------------~~pkp~~l~~~l~ 200 (263)
.+++||+.++|+ ++|++++|+||++...++.+++. +|+..+|+.++.. + ..+||+.+..+++
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 578999999998 88999999999999999999995 9998766543311 1 1278999999999
Q ss_pred hCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhh
Q 024758 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAK 258 (263)
Q Consensus 201 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~ 258 (263)
++|+++++|++|||+.+|+.+|++ ||+.+ + ++ ..+++.+ .|..+..+
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~~~~----ag~~~-~--~~--~~~~~~~--~a~~v~~~ 200 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISMFKK----AGLKI-A--FC--AKPILKE--KADICIEK 200 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----CSEEE-E--ES--CCHHHHT--TCSEEECS
T ss_pred HcCCCHHHEEEEecChhHHHHHHH----CCCEE-E--EC--CCHHHHh--hcceeecc
Confidence 999999999999999999999997 89853 2 34 3455543 34445554
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-20 Score=153.22 Aligned_cols=119 Identities=13% Similarity=0.103 Sum_probs=98.5
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEE-----cCC----CC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLY-----GLG----TG 189 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~-----G~~----~~ 189 (263)
..++|||+.++|+ ++|++++|+||++. ..++.+|++ +| .+|+.++ +++ .|
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g--~~~~~~~~~~~~~~~~~~~~K 101 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQ-MG--GVVDAIFMCPHGPDDGCACRK 101 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHH-TT--CCCCEEEEECCCTTSCCSSST
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHh-CC--CceeEEEEcCCCCCCCCCCCC
Confidence 3589999999999 88999999999997 778889995 88 4555555 222 35
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh-hhhHhHHHhhhccc
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL-YLYAVALFAKMDVL 262 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~-~~~~~~~~~~~~~~ 262 (263)
|+|+++..+++++|++|++++||||+.+|+++|++ +|+++|+|.||++..+.+.. ...|..++.++++|
T Consensus 102 P~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el 171 (179)
T 3l8h_A 102 PLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQ----AGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAV 171 (179)
T ss_dssp TSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHH----HTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----CCCcEEEECCCCcchhhhhcccCCCcEEecCHHHH
Confidence 99999999999999999999999999999999998 99999999999987776643 34566666666553
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-21 Score=168.06 Aligned_cols=116 Identities=8% Similarity=-0.048 Sum_probs=92.0
Q ss_pred CCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc---eEEcCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024758 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 139 ~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~---~v~G~~----~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
.+|||+.++|+ .+|+++ |+||++.......+.. +|+..+|+ .+++.+ .+|+|+++..+++++|++|++|
T Consensus 122 ~~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 199 (259)
T 2ho4_A 122 FHYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLA-LGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEA 199 (259)
T ss_dssp CBHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEE-ECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGE
T ss_pred CCHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcc-cCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHE
Confidence 48999999998 689999 9999988777666764 88887776 555654 3599999999999999999999
Q ss_pred EEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHh-hhhHhHHHhhhc
Q 024758 210 HFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLL-YLYAVALFAKMD 260 (263)
Q Consensus 210 l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~-~~~~~~~~~~~~ 260 (263)
+||||+. +|+.+|++ ||+++|+|.||.....+... ...|..++.++.
T Consensus 200 ~~iGD~~~~Di~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~ 248 (259)
T 2ho4_A 200 VMIGDDCRDDVDGAQN----IGMLGILVKTGKYKAADEEKINPPPYLTCESFP 248 (259)
T ss_dssp EEEESCTTTTHHHHHH----TTCEEEEESSTTCCTTGGGGSSSCCSEEESCHH
T ss_pred EEECCCcHHHHHHHHH----CCCcEEEECCCCCCcccccccCCCCCEEECCHH
Confidence 9999998 99999998 99999999999654433221 334444444443
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-19 Score=157.08 Aligned_cols=91 Identities=13% Similarity=0.064 Sum_probs=76.1
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 215 (263)
+++||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++.+ |...+....+.+ +++||||+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~~~~---k~~~~k~~~~~~-----~~~~vGD~ 214 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEE-LGLDDYFAEVLPHE---KAEKVKEVQQKY-----VTAMVGDG 214 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCGGG---HHHHHHHHHTTS-----CEEEEECT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCChhHhHhcCHHH---HHHHHHHHHhcC-----CEEEEeCC
Confidence 68999999998 78999999999999999999995 99999999888764 444444444433 78999999
Q ss_pred hhhHHHhhccCcCCCCcEEEEcCCCCChHH
Q 024758 216 LATLKNVIKEPELDGWNLYLGNLFRFLCHI 245 (263)
Q Consensus 216 ~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~ 245 (263)
.+|++++++ || ++|.||++..+.
T Consensus 215 ~nDi~~~~~----Ag---~~va~~~~~~~~ 237 (280)
T 3skx_A 215 VNDAPALAQ----AD---VGIAIGAGTDVA 237 (280)
T ss_dssp TTTHHHHHH----SS---EEEECSCCSSSC
T ss_pred chhHHHHHh----CC---ceEEecCCcHHH
Confidence 999999997 89 489999865543
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.2e-19 Score=147.70 Aligned_cols=100 Identities=10% Similarity=0.098 Sum_probs=93.1
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhhCCCCCCceEEcCCC--------CCcHHHHHHHHhhC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTITPDRLYGLGT--------GPKVNVLKQLQKKP 202 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~---~~a~~iL~~~~gl~~~f~~v~G~~~--------~pkp~~l~~~l~~l 202 (263)
..++|||+.++|+ ++|++++|+||++. ..++.+|++ +|+..+|+.|++++. ||+|+++..+++++
T Consensus 32 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN-FGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-TTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred CceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh-cCchhheEEEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 4789999999999 88999999999988 899999996 999999999998652 59999999999999
Q ss_pred CCCCCcEEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 203 EHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 203 ~~~~~~~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
|++|++++||||+ .+|+++|++ +|+++|+|.+|..
T Consensus 111 ~~~~~~~l~VGD~~~~Di~~A~~----aG~~~i~v~~~~~ 146 (189)
T 3ib6_A 111 QIDKTEAVMVGNTFESDIIGANR----AGIHAIWLQNPEV 146 (189)
T ss_dssp TCCGGGEEEEESBTTTTHHHHHH----TTCEEEEECCTTT
T ss_pred CCCcccEEEECCCcHHHHHHHHH----CCCeEEEECCccc
Confidence 9999999999999 799999998 9999999999976
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.7e-20 Score=164.58 Aligned_cols=110 Identities=13% Similarity=0.074 Sum_probs=90.0
Q ss_pred ccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 135 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
....++|||+.++|+ ++|++++|+||+++..++.++++ +|+..+|+.++ |+....++++++..+++++|
T Consensus 132 ~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~-------p~~k~~~~~~l~~~~~~~~~ 203 (263)
T 2yj3_A 132 NISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKE-LNIQEYYSNLS-------PEDKVRIIEKLKQNGNKVLM 203 (263)
Confidence 345689999999999 78999999999999999999996 99999998876 45567788899999999999
Q ss_pred EcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHH--hhhccc
Q 024758 212 VEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALF--AKMDVL 262 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~--~~~~~~ 262 (263)
|||+.+|+.++++ || ++|.||+++.... ..|..++ .+++.|
T Consensus 204 VGD~~~D~~aa~~----Ag---v~va~g~~~~~~~---~~ad~v~~~~~l~~l 246 (263)
T 2yj3_A 204 IGDGVNDAAALAL----AD---VSVAMGNGVDISK---NVADIILVSNDIGTL 246 (263)
Confidence 9999999999987 88 5799997644332 2355555 555543
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-19 Score=166.05 Aligned_cols=120 Identities=15% Similarity=-0.082 Sum_probs=103.4
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc--eEEcCC---------------CCCcHHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLG---------------TGPKVNVLK 196 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~--~v~G~~---------------~~pkp~~l~ 196 (263)
..++|||+.++|+ ++|++++|+||++...++.+|++ +|+..+|+ .|++++ .||+|+++.
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~-lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-cCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 3579999999999 78999999999999999999995 99999999 788743 469999999
Q ss_pred HHHhhCC--------------CCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCC---hHHHHhhhhHhHHHhhh
Q 024758 197 QLQKKPE--------------HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFL---CHILLLYLYAVALFAKM 259 (263)
Q Consensus 197 ~~l~~l~--------------~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~---~~~l~~~~~~~~~~~~~ 259 (263)
.+++++| ++|++|+|||||.+|+++|++ ||+++|+|+||++. .+++. ..+|..++.++
T Consensus 292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~----AG~~~I~V~~g~~~~~~~~~l~-~~~ad~vi~sl 366 (384)
T 1qyi_A 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK----IGATFIGTLTGLKGKDAAGELE-AHHADYVINHL 366 (384)
T ss_dssp HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHH----HTCEEEEESCBTTBGGGHHHHH-HTTCSEEESSG
T ss_pred HHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHH----cCCEEEEECCCccccccHHHHh-hcCCCEEECCH
Confidence 9999999 899999999999999999998 99999999999864 34443 34666677776
Q ss_pred ccc
Q 024758 260 DVL 262 (263)
Q Consensus 260 ~~~ 262 (263)
.+|
T Consensus 367 ~eL 369 (384)
T 1qyi_A 367 GEL 369 (384)
T ss_dssp GGH
T ss_pred HHH
Confidence 654
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-19 Score=140.93 Aligned_cols=108 Identities=10% Similarity=0.055 Sum_probs=98.0
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
.++||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++++|
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 96 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRE-LETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVL 96 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHH-HHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-CChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 57899999999 78999999999999999999995 99999999999753 469999999999999999999999
Q ss_pred EcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhh
Q 024758 212 VEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLY 251 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~ 251 (263)
|||+..|+++|++ +|+.++++.||....++|.+.++
T Consensus 97 vgD~~~di~~a~~----~G~~~i~~~~~~~~~~~l~~~~~ 132 (137)
T 2pr7_A 97 VDDSILNVRGAVE----AGLVGVYYQQFDRAVVEIVGLFG 132 (137)
T ss_dssp EESCHHHHHHHHH----HTCEEEECSCHHHHHHHHHHHHT
T ss_pred EcCCHHHHHHHHH----CCCEEEEeCChHHHHHHHHHHhC
Confidence 9999999999998 99999999999877777776654
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.6e-20 Score=162.95 Aligned_cols=118 Identities=14% Similarity=0.013 Sum_probs=89.6
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHH---HHHHhhCCCCCCceEEcCCC-----CCcHHHHHHHHhhCCCCCC
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVET---LLRELAGVTITPDRLYGLGT-----GPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~---iL~~~~gl~~~f~~v~G~~~-----~pkp~~l~~~l~~l~~~~~ 207 (263)
..+|||+.++|+ ++|+++ |+||++...... +++. .++..+|+.+++.+. +|||+.+..+++++|++|+
T Consensus 136 ~~~~~~~~~~l~~l~~~~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~ 213 (271)
T 1vjr_A 136 TLTYERLKKACILLRKGKFY-IATHPDINCPSKEGPVPDA-GSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKE 213 (271)
T ss_dssp TCCHHHHHHHHHHHTTTCEE-EESCCCSEECCTTSCEECH-HHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGG
T ss_pred CcCHHHHHHHHHHHHCCCeE-EEECCCccccCCCCccccc-cHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCc
Confidence 468999999998 788998 999987543221 2232 344445666666543 4999999999999999999
Q ss_pred cEEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhcc
Q 024758 208 RLHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDV 261 (263)
Q Consensus 208 ~~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~ 261 (263)
+++||||+ .+|+++|++ ||+.+++|.||++..+++.+. ..|..++.++.+
T Consensus 214 e~i~iGD~~~nDi~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~e 265 (271)
T 1vjr_A 214 RMAMVGDRLYTDVKLGKN----AGIVSILVLTGETTPEDLERAETKPDFVFKNLGE 265 (271)
T ss_dssp GEEEEESCHHHHHHHHHH----HTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHH
T ss_pred eEEEECCCcHHHHHHHHH----cCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHH
Confidence 99999999 599999998 999999999999988777542 244444444443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.3e-18 Score=158.86 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=84.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEE--------c---CC---CCCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY--------G---LG---TGPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~--------G---~~---~~pkp~~l~~~l~ 200 (263)
.+++||+.++|+ ++|++++|+||.....++.++++ +|++.+|+..+ | .+ .+|||+.+..+++
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEE-LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 379999999999 78999999999999999999996 99988776422 1 11 2399999999999
Q ss_pred hCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 201 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
++|++|++++||||+.+|+.+|++ ||+.++ | +....+.+
T Consensus 334 ~~gi~~~~~i~vGD~~~Di~~a~~----aG~~va---~--~~~~~~~~ 372 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGANDIDMLAA----AGLGIA---F--NAKPALRE 372 (415)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----SSEEEE---E--SCCHHHHH
T ss_pred HcCcChhhEEEEECCHHHHHHHHH----CCCeEE---E--CCCHHHHH
Confidence 999999999999999999999997 897544 4 34444543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-18 Score=146.57 Aligned_cols=116 Identities=15% Similarity=0.110 Sum_probs=95.7
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCc---------------hHHHHHHHHHhhCCCCCCceEE-cC-----------
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQ---------------SRFVETLLRELAGVTITPDRLY-GL----------- 186 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~---------------~~~a~~iL~~~~gl~~~f~~v~-G~----------- 186 (263)
..++|||+.++|+ ++|++++|+||++ ...++.+|++ +|+. |+.++ +.
T Consensus 48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--f~~~~~~~~~~~~~~~~~~ 124 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVD--LDGIYYCPHHPQGSVEEFR 124 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCBTTCSSGGGB
T ss_pred cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH-cCCc--eEEEEECCcCCCCcccccC
Confidence 4689999999999 7899999999999 4788999996 9997 66654 21
Q ss_pred -C---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE-EEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 187 -G---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 187 -~---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~-v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
+ .||+|+++..+++++|++|++++||||+.+|+++|++ +|+++ ++|.||+...+... ..|..++.++.+
T Consensus 125 ~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~----aG~~~~i~v~~g~~~~~~~~--~~~d~vi~~l~e 198 (211)
T 2gmw_A 125 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVA----ANVGTKVLVRTGKPITPEAE--NAADWVLNSLAD 198 (211)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHH----TTCSEEEEESSSSCCCHHHH--HHCSEEESCGGG
T ss_pred ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH----CCCceEEEEecCCCcccccc--CCCCEEeCCHHH
Confidence 1 3599999999999999999999999999999999998 99999 99999997654332 345545555544
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.8e-18 Score=150.63 Aligned_cols=98 Identities=15% Similarity=0.026 Sum_probs=81.8
Q ss_pred CCcccHHHHHH---hC-CCcEEEEcCC---------------------chHHHHHHHHHhhCCCCCCceE----------
Q 024758 139 RLYPGVSDALK---LA-SSRIYIVTSN---------------------QSRFVETLLRELAGVTITPDRL---------- 183 (263)
Q Consensus 139 ~lypGv~e~L~---~~-g~~laI~TnK---------------------~~~~a~~iL~~~~gl~~~f~~v---------- 183 (263)
.++||+.++|+ ++ |+++++.|++ ....+..+|++ +|+..+|..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEE-YGVSVNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHH-HTEEEEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHH-cCCCEEEEEccccccCCCCc
Confidence 57899999998 44 9999999988 77888999995 9998777654
Q ss_pred EcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 184 YGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 184 ~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
++.+ ..+|++.+..+++++|+++++++||||+.+|+.++++ || ++|.||....+
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~----ag---~~~~~~~~~~~ 258 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQT----VG---NGYLLKNATQE 258 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTT----SS---EEEECTTCCHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHh----CC---cEEEECCccHH
Confidence 3222 2389999999999999999999999999999999987 88 56778876544
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=6.2e-18 Score=140.74 Aligned_cols=105 Identities=15% Similarity=0.158 Sum_probs=87.3
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhhCCCCCCceEE-c-----CC---C
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRLY-G-----LG---T 188 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK---------------~~~~a~~iL~~~~gl~~~f~~v~-G-----~~---~ 188 (263)
...++|||+.++|+ ++|++++|+||+ +...++.+|++ +|+. |+.|+ + .+ .
T Consensus 39 ~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~v~~s~~~~~~~~~~~ 115 (176)
T 2fpr_A 39 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQ--FDEVLICPHLPADECDCR 115 (176)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHH-TTCC--EEEEEEECCCGGGCCSSS
T ss_pred HHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHH-cCCC--eeEEEEcCCCCccccccc
Confidence 35689999999999 789999999999 78899999996 9997 88875 3 22 3
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
||+|+++..+++++|++|++++||||+..|+++|++ +|+++|+|.+|-..-+++.
T Consensus 116 KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~----aG~~~i~v~~~~~~~~~~~ 170 (176)
T 2fpr_A 116 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAEN----MGINGLRYDRETLNWPMIG 170 (176)
T ss_dssp TTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHH----HTSEEEECBTTTBCHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH----cCCeEEEEcCCcccHHHHH
Confidence 599999999999999999999999999999999998 9999999999965444443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.7e-17 Score=141.53 Aligned_cols=81 Identities=15% Similarity=0.174 Sum_probs=71.9
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 144 v~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
..+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||+.++.+++++|+++++|+||||+.+|+.+++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~-lgi~~~f~~~-----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~ 157 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANT-LGITHLYQGQ-----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMA 157 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCCEEECSC-----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHT
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCchhhccc-----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHH
Confidence 44445589999999999999999999996 9998777654 79999999999999999999999999999999998
Q ss_pred ccCcCCCCcEE
Q 024758 224 KEPELDGWNLY 234 (263)
Q Consensus 224 ~~~~~Agi~~v 234 (263)
+ ||+.++
T Consensus 158 ~----ag~~~a 164 (211)
T 3ij5_A 158 Q----VGLSVA 164 (211)
T ss_dssp T----SSEEEE
T ss_pred H----CCCEEE
Confidence 7 897643
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.70 E-value=9.8e-19 Score=153.41 Aligned_cols=119 Identities=13% Similarity=0.047 Sum_probs=92.1
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHH--HHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCc
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFV--ETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a--~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~ 208 (263)
...+|||+.++|+ ++|+++ |+||++.... ..++....++..+|+.++|.+ .||+|+++..++++ ++|++
T Consensus 128 ~~~~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~ 204 (263)
T 1zjj_A 128 PDLTYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEE 204 (263)
T ss_dssp TTCBHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCE
T ss_pred CCCCHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCccc
Confidence 4578999999998 789998 9999987554 223321134555678888865 35999999999998 99999
Q ss_pred EEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhccc
Q 024758 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDVL 262 (263)
Q Consensus 209 ~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~~ 262 (263)
++||||+. +||.+|++ +|+++++|.||++..+++.+. ..|..++.++.+|
T Consensus 205 ~~~VGD~~~~Di~~A~~----aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el 256 (263)
T 1zjj_A 205 LWMVGDRLDTDIAFAKK----FGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYEL 256 (263)
T ss_dssp EEEEESCTTTHHHHHHH----TTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGG
T ss_pred EEEECCChHHHHHHHHH----cCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 99999995 99999998 999999999999988877542 2455555555443
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=9.5e-19 Score=156.92 Aligned_cols=121 Identities=12% Similarity=0.039 Sum_probs=95.3
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEcCCchHHH--H-HHHHHhhC-CCCCCceEEcCC----CCCcHHHHHHHHhhCCC
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFV--E-TLLRELAG-VTITPDRLYGLG----TGPKVNVLKQLQKKPEH 204 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a--~-~iL~~~~g-l~~~f~~v~G~~----~~pkp~~l~~~l~~l~~ 204 (263)
....+|||+.++|+ ++|+ ++|+||++.... . .++.. +| +..+|+.+++.+ .||+|+++..+++++|+
T Consensus 153 ~~~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi 230 (306)
T 2oyc_A 153 DEHFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPG-TGSLAAAVETASGRQALVVGKPSPYMFECITENFSI 230 (306)
T ss_dssp CTTCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEEC-HHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCC-CcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCC
Confidence 34568999999998 5688 999999987654 2 23332 44 555677777765 35999999999999999
Q ss_pred CCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHh-------hhhHhHHHhhhccc
Q 024758 205 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLL-------YLYAVALFAKMDVL 262 (263)
Q Consensus 205 ~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~-------~~~~~~~~~~~~~~ 262 (263)
+|++++||||+. +||++|++ +|+++++|.||++..+++.+ ...|..++.++.+|
T Consensus 231 ~~~e~l~vGD~~~~Di~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el 292 (306)
T 2oyc_A 231 DPARTLMVGDRLETDILFGHR----CGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL 292 (306)
T ss_dssp CGGGEEEEESCTTTHHHHHHH----HTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGG
T ss_pred ChHHEEEECCCchHHHHHHHH----CCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHH
Confidence 999999999996 99999998 99999999999998887764 24566666666554
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.4e-19 Score=153.91 Aligned_cols=115 Identities=10% Similarity=0.031 Sum_probs=74.9
Q ss_pred CcccHHHHHH---hC-CCcEEEEcCCchHHHHHHHHHhhCCCCCCc---eEEcCC----CCCcHHHHHHHHhhCCCCCCc
Q 024758 140 LYPGVSDALK---LA-SSRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 140 lypGv~e~L~---~~-g~~laI~TnK~~~~a~~iL~~~~gl~~~f~---~v~G~~----~~pkp~~l~~~l~~l~~~~~~ 208 (263)
+||++.+.++ ++ |+++ |+||.+.......+.. .++..+|+ .+.+.+ .+|||+.+..+++++|+++++
T Consensus 132 ~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~ 209 (271)
T 2x4d_A 132 SYQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLM-LDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQ 209 (271)
T ss_dssp CHHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEE-ECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGG
T ss_pred CHHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcc-cChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcce
Confidence 4667777766 34 7777 6776654332222221 22222222 122222 349999999999999999999
Q ss_pred EEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHh-hhhHhHHHhhhc
Q 024758 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLL-YLYAVALFAKMD 260 (263)
Q Consensus 209 ~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~-~~~~~~~~~~~~ 260 (263)
+++|||+. +|+.+|++ ||+.+++|.||....++... ...|..++.++.
T Consensus 210 ~i~iGD~~~nDi~~a~~----aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 259 (271)
T 2x4d_A 210 AVMIGDDIVGDVGGAQR----CGMRALQVRTGKFRPSDEHHPEVKADGYVDNLA 259 (271)
T ss_dssp EEEEESCTTTTHHHHHH----TTCEEEEESSTTCCGGGGGCSSCCCSEEESSHH
T ss_pred EEEECCCcHHHHHHHHH----CCCcEEEEcCCCCCchhhcccCCCCCEEeCCHH
Confidence 99999998 99999997 99999999999554433222 233444444443
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-18 Score=143.16 Aligned_cols=94 Identities=10% Similarity=0.049 Sum_probs=75.2
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-----CCcHHHHHHHHhhCCCCCCc
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----GPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-----~pkp~~l~~~l~~l~~~~~~ 208 (263)
...++||+.++|+ ++|++++|+||++...++.+ ++ +|+..+++.+...+. +|.|.....+++++ ++++
T Consensus 77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~ 152 (201)
T 4ap9_A 77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KE-LGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGF 152 (201)
T ss_dssp GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TT-TSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSC
T ss_pred hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HH-cCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCc
Confidence 4589999999999 78999999999999999999 85 999877666664331 24444445667766 8999
Q ss_pred EEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 209 LHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 209 ~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
++||||+.+|+.+|++ ||+. +++..+
T Consensus 153 ~i~iGD~~~Di~~~~~----ag~~-v~~~~~ 178 (201)
T 4ap9_A 153 ILAMGDGYADAKMFER----ADMG-IAVGRE 178 (201)
T ss_dssp EEEEECTTCCHHHHHH----CSEE-EEESSC
T ss_pred EEEEeCCHHHHHHHHh----CCce-EEECCC
Confidence 9999999999999998 8996 555444
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.6e-17 Score=147.07 Aligned_cols=95 Identities=18% Similarity=0.088 Sum_probs=82.1
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHh--------hCCCCCCceEEcCC---CCCcHHHHHHHHh
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLREL--------AGVTITPDRLYGLG---TGPKVNVLKQLQK 200 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~iL~~~--------~gl~~~f~~v~G~~---~~pkp~~l~~~l~ 200 (263)
+++||||.++|+ ++|++++|+|||++.. +...|+ + +|+ +|+.+++.+ .+|+|+++..+++
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~-~~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~ 263 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYR-MTRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFW 263 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHH-HHHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHH-hcccccccccCC--CchheeeccCCCCcHHHHHHHHHHH
Confidence 457999999999 8999999999999765 466777 5 788 588888754 3599999999999
Q ss_pred hCCCCCCc-EEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 201 KPEHQGLR-LHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 201 ~l~~~~~~-~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
+++.++.+ ++|||||.+|+++|++ |||++++|+||
T Consensus 264 ~~~~~~~~~~~~vgD~~~di~~a~~----aG~~~~~v~~G 299 (301)
T 1ltq_A 264 KHIAPHFDVKLAIDDRTQVVEMWRR----IGVECWQVASG 299 (301)
T ss_dssp HHTTTTCEEEEEEECCHHHHHHHHH----TTCCEEECSCC
T ss_pred HHhccccceEEEeCCcHHHHHHHHH----cCCeEEEecCC
Confidence 99877655 7999999999999998 99999999999
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4e-17 Score=153.68 Aligned_cols=95 Identities=22% Similarity=0.235 Sum_probs=81.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCc---------h---HHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHH
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQ---------S---RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQ 199 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~---------~---~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l 199 (263)
.+|||+.++|+ ++|++++|+||++ . ..++.+|++ +|+. |+.+++++ .||+|++++.++
T Consensus 87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~-lgl~--fd~i~~~~~~~~~KP~p~~~~~a~ 163 (416)
T 3zvl_A 87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQ 163 (416)
T ss_dssp ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSTTSTTSSHHHHHHH
T ss_pred hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHH-cCCC--EEEEEECCCCCCCCCCHHHHHHHH
Confidence 38999999999 8999999999987 2 338899995 9994 89999865 359999999999
Q ss_pred hhCC----CCCCcEEEEcCCh-----------------hhHHHhhccCcCCCCcEEEEcCCC
Q 024758 200 KKPE----HQGLRLHFVEDRL-----------------ATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 200 ~~l~----~~~~~~l~VGDs~-----------------~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
+++| +++++|+||||+. .|+.+|++ +|++++.....|
T Consensus 164 ~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~----aGi~f~~pe~~f 221 (416)
T 3zvl_A 164 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALN----VGLPFATPEEFF 221 (416)
T ss_dssp HHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHH----HTCCEECHHHHH
T ss_pred HHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHH----cCCcccCcHHhh
Confidence 9997 9999999999997 89999997 999987654444
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.68 E-value=5.3e-17 Score=136.56 Aligned_cols=87 Identities=15% Similarity=0.125 Sum_probs=74.5
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 144 v~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
..+.|+++|++++|+||+++..++.++++ +|+..+|+.+ .+||+.+..+++++|+++++++||||+.+|+.+++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgl~~~f~~~-----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~ 127 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKS-LGIEHLFQGR-----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIR 127 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHH-cCCHHHhcCc-----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHH
Confidence 44445589999999999999999999996 9998887765 68999999999999999999999999999999999
Q ss_pred ccCcCCCCcEEEEcCCCCCh
Q 024758 224 KEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 224 ~~~~~Agi~~v~v~wGy~~~ 243 (263)
+ ||+. +.+|...+
T Consensus 128 ~----ag~~---~~~~~~~~ 140 (189)
T 3mn1_A 128 R----VGLG---MAVANAAS 140 (189)
T ss_dssp H----SSEE---EECTTSCH
T ss_pred H----CCCe---EEeCCccH
Confidence 7 8975 34554433
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-17 Score=149.58 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=85.9
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEE--------c---CC---CCCcHHHHHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY--------G---LG---TGPKVNVLKQLQ 199 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~--------G---~~---~~pkp~~l~~~l 199 (263)
..+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+..+ | .+ .+|||+.+..++
T Consensus 176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~ 254 (335)
T 3n28_A 176 TLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQ-LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLA 254 (335)
T ss_dssp TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHH
T ss_pred hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHH
Confidence 3579999999999 78999999999999999999996 99988777542 1 12 138999999999
Q ss_pred hhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 200 KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 200 ~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
+++|+++++|+||||+.+|+.++++ ||+.+ .| +..+.+.+.+
T Consensus 255 ~~lgi~~~~~v~vGDs~nDi~~a~~----aG~~v---a~--~~~~~~~~~a 296 (335)
T 3n28_A 255 QQYDVEIHNTVAVGDGANDLVMMAA----AGLGV---AY--HAKPKVEAKA 296 (335)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHH----SSEEE---EE--SCCHHHHTTS
T ss_pred HHcCCChhhEEEEeCCHHHHHHHHH----CCCeE---Ee--CCCHHHHhhC
Confidence 9999999999999999999999997 89744 44 3445555443
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=6.2e-17 Score=131.84 Aligned_cols=81 Identities=12% Similarity=0.017 Sum_probs=71.2
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 144 v~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
+.+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||+.+..+++++++++++++||||+.+|+.+|+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~ 112 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEK-LKVDYLFQGV-----VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLK 112 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHH-TTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHT
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHH-cCCCEeeccc-----CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 34444488999999999999999999996 9998776543 79999999999999999999999999999999998
Q ss_pred ccCcCCCCcEE
Q 024758 224 KEPELDGWNLY 234 (263)
Q Consensus 224 ~~~~~Agi~~v 234 (263)
+ +|+.++
T Consensus 113 ~----ag~~~~ 119 (164)
T 3e8m_A 113 R----VGIAGV 119 (164)
T ss_dssp T----SSEEEC
T ss_pred H----CCCeEE
Confidence 7 898554
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-16 Score=140.88 Aligned_cols=104 Identities=15% Similarity=0.094 Sum_probs=79.6
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhhCCC--CCCceEEcCCCCCcHHHHHHHHhhCCCCCCc
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVT--ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~---~~~a~~iL~~~~gl~--~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~ 208 (263)
..+++||+.++|+ ++|++++|+||++ ...+...|+. +|+. .+|+.+++.+...||.+...+++ .+. ..
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~-~Gl~~v~~~~vi~~~~~~~K~~~~~~~~~-~~~--~~ 174 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLER-VGAPQATKEHILLQDPKEKGKEKRRELVS-QTH--DI 174 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHH-HTCSSCSTTTEEEECTTCCSSHHHHHHHH-HHE--EE
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHH-cCCCcCCCceEEECCCCCCCcHHHHHHHH-hCC--Cc
Confidence 3579999999999 8999999999999 6678888895 9998 78999988764344555544432 232 34
Q ss_pred EEEEcCChhhHHHhh-------c-----cCcCCCCcEEEEcCCCCChH
Q 024758 209 LHFVEDRLATLKNVI-------K-----EPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 209 ~l~VGDs~~Di~aA~-------~-----~~~~Agi~~v~v~wGy~~~~ 244 (263)
++||||+.+|+++|+ + .+..+|++++.+.|+....-
T Consensus 175 ~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w 222 (258)
T 2i33_A 175 VLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDW 222 (258)
T ss_dssp EEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHH
T ss_pred eEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchh
Confidence 899999999999984 1 11237999999999965543
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.6e-17 Score=140.60 Aligned_cols=101 Identities=24% Similarity=0.201 Sum_probs=88.0
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEE-cC-----------
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLY-GL----------- 186 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~-G~----------- 186 (263)
..+++||+.++|+ ++|++++|+||++. ..++.+|++ +|+. |+.++ +.
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--~~~~~~~~~~~~g~~~~~~ 130 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGVF--VDMVLACAYHEAGVGPLAI 130 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCCTTCCSTTCC
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHH-cCCc--eeeEEEeecCCCCceeecc
Confidence 3589999999999 78999999999998 788999996 9985 55433 32
Q ss_pred C----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE-EEEcCCCCChH
Q 024758 187 G----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLGNLFRFLCH 244 (263)
Q Consensus 187 ~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~-v~v~wGy~~~~ 244 (263)
+ .||+|+++..+++++|++|++++||||+.+|+++|++ +|+++ ++|.||+...+
T Consensus 131 ~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~----aG~~~~i~v~~g~~~~~ 189 (218)
T 2o2x_A 131 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKR----AGLAQGWLVDGEAAVQP 189 (218)
T ss_dssp SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHH----TTCSEEEEETCCCEEET
T ss_pred cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHH----CCCCEeEEEecCCCCcc
Confidence 2 2599999999999999999999999999999999998 99999 99999987654
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-18 Score=152.06 Aligned_cols=119 Identities=11% Similarity=0.002 Sum_probs=81.6
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHH---HHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~---~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~ 208 (263)
...|+++.+.+. ..+. ..++||+...... .++.. .++..+|+.+++.+ .+|||..+..+++++|+++++
T Consensus 125 ~~~~~~~~~~~~~l~~~~-~~i~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 202 (266)
T 3pdw_A 125 SITYEKFAVGCLAIRNGA-RFISTNGDIAIPTERGLLPGN-GSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSE 202 (266)
T ss_dssp TCCHHHHHHHHHHHHTTC-EEEESCCCCEEEETTEEEECH-HHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGG
T ss_pred CCCHHHHHHHHHHHHCCC-eEEEEcCCceeECCCceEecc-hHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhh
Confidence 457899998887 5555 6788987653210 00000 11222344444443 359999999999999999999
Q ss_pred EEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhccc
Q 024758 209 LHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDVL 262 (263)
Q Consensus 209 ~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~~ 262 (263)
++||||+ .+|+.+|++ +|+.+++|.||++..+++.+. ..|..+.+++++|
T Consensus 203 ~~~iGD~~~~Di~~~~~----aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el 254 (266)
T 3pdw_A 203 TLMVGDNYATDIMAGIN----AGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEW 254 (266)
T ss_dssp EEEEESCTTTHHHHHHH----HTCEEEEECCC------CCTTSCCCSEEESSGGGG
T ss_pred EEEECCCcHHHHHHHHH----CCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHH
Confidence 9999999 799999998 999999999999988887643 3577777777665
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.2e-17 Score=134.26 Aligned_cols=86 Identities=19% Similarity=0.174 Sum_probs=72.0
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 144 v~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
..+.|+++|++++|+||++...++.++++ +|+. +| .+. +|||+.+..+++++|+++++++||||+.+|+.+++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgi~-~~---~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~ 119 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARK-LKIP-VL---HGI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFA 119 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHH-HTCC-EE---ESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHH-cCCe-eE---eCC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHH
Confidence 44445589999999999999999999996 9997 32 222 79999999999999999999999999999999999
Q ss_pred ccCcCCCCcEEEEcCCCCCh
Q 024758 224 KEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 224 ~~~~~Agi~~v~v~wGy~~~ 243 (263)
+ ||+ ++.+|...+
T Consensus 120 ~----ag~---~v~~~~~~~ 132 (176)
T 3mmz_A 120 L----VGW---PVAVASAHD 132 (176)
T ss_dssp H----SSE---EEECTTCCH
T ss_pred H----CCC---eEECCChhH
Confidence 7 885 455665444
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-18 Score=152.86 Aligned_cols=119 Identities=12% Similarity=0.064 Sum_probs=86.6
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHH---HHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCc
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~---~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~ 208 (263)
...|+++.+.+. .++. ..|+||+...... .++.. .++..+|+.+++.+ .||+|+++..+++++|+++++
T Consensus 124 ~~~~~~~~~~~~~l~~~~-~~i~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 201 (264)
T 3epr_A 124 NVTYDKLATATLAIQNGA-LFIGTNPDLNIPTERGLLPGA-GSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQ 201 (264)
T ss_dssp TCCHHHHHHHHHHHHTTC-EEEESCCCSEEEETTEEEECH-HHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGG
T ss_pred CCCHHHHHHHHHHHHCCC-eEEEEcCCccccCCCceecCc-cHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhCcCccc
Confidence 346888888877 5665 4588987642110 00000 11222345555544 359999999999999999999
Q ss_pred EEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhccc
Q 024758 209 LHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDVL 262 (263)
Q Consensus 209 ~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~~ 262 (263)
++||||+ .+|+.+|++ +|+++++|.||++..+++.+. ..|..+++++++|
T Consensus 202 ~~~vGD~~~~Di~~a~~----aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l 253 (264)
T 3epr_A 202 AVMVGDNYLTDIMAGIN----NDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEW 253 (264)
T ss_dssp EEEEESCTTTHHHHHHH----HTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGC
T ss_pred EEEECCCcHHHHHHHHH----CCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 9999999 699999998 999999999999998887642 3677777777765
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-15 Score=129.43 Aligned_cols=78 Identities=21% Similarity=0.230 Sum_probs=69.2
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhcc
Q 024758 146 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (263)
Q Consensus 146 e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 225 (263)
+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||+.+..+++++|+++++++||||+.+|+.++++
T Consensus 62 ~~L~~~G~~~~ivT~~~~~~~~~~l~~-lgi~~~~~~~-----k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~- 134 (195)
T 3n07_A 62 KALMNAGIEIAIITGRRSQIVENRMKA-LGISLIYQGQ-----DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEK- 134 (195)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHHHHH-TTCCEEECSC-----SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTT-
T ss_pred HHHHHCCCEEEEEECcCHHHHHHHHHH-cCCcEEeeCC-----CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH-
Confidence 444588999999999999999999996 9998766532 799999999999999999999999999999999987
Q ss_pred CcCCCCcE
Q 024758 226 PELDGWNL 233 (263)
Q Consensus 226 ~~~Agi~~ 233 (263)
+|+.+
T Consensus 135 ---ag~~v 139 (195)
T 3n07_A 135 ---VALRV 139 (195)
T ss_dssp ---SSEEE
T ss_pred ---CCCEE
Confidence 88654
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=9.1e-16 Score=127.62 Aligned_cols=75 Identities=12% Similarity=0.104 Sum_probs=68.0
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCC
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 229 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 229 (263)
++|++++|+||++...++.++++ +|+..+|+. .+|||+.+..+++++++++++++||||+.+|+.++++ +
T Consensus 49 ~~G~~~~i~Tg~~~~~~~~~~~~-lgl~~~~~~-----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~----a 118 (180)
T 1k1e_A 49 DADIQVAVLSGRDSPILRRRIAD-LGIKLFFLG-----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA----C 118 (180)
T ss_dssp HTTCEEEEEESCCCHHHHHHHHH-HTCCEEEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----S
T ss_pred HCCCeEEEEeCCCcHHHHHHHHH-cCCceeecC-----CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----c
Confidence 78999999999999999999996 999876532 3699999999999999999999999999999999997 8
Q ss_pred CCcEE
Q 024758 230 GWNLY 234 (263)
Q Consensus 230 gi~~v 234 (263)
|+.++
T Consensus 119 g~~~~ 123 (180)
T 1k1e_A 119 GTSFA 123 (180)
T ss_dssp SEEEE
T ss_pred CCeEE
Confidence 98765
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-14 Score=126.92 Aligned_cols=98 Identities=13% Similarity=-0.021 Sum_probs=68.1
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhC--CCCCCceEEcCC------C-C-CcHHHHHHHHhhCCCCCC
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLG------T-G-PKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~g--l~~~f~~v~G~~------~-~-pkp~~l~~~l~~l~~~~~ 207 (263)
++++.++++ ....++.+.+++ ...+.+.+. +. +...+..+.+.. . + +|+..+..+++++|++++
T Consensus 138 ~~~~~~~~~~~~~~~~ki~~~~~~--~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~ 214 (279)
T 4dw8_A 138 IRETNDFLTDITLPVAKCLIVGDA--GKLIPVESE-LCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTRE 214 (279)
T ss_dssp EEECSCHHHHSCSCCSCEEEESCH--HHHHHHHHH-HHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGG
T ss_pred cccHHHHHHhhcCCceEEEEeCCH--HHHHHHHHH-HHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 445555554 556777777643 233333332 22 334466666542 1 2 789999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 208 RLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
++++|||+.+|+++++. || ++|.||...++ +.+.
T Consensus 215 ~~i~~GD~~NDi~m~~~----ag---~~vam~na~~~-~k~~ 248 (279)
T 4dw8_A 215 EVIAIGDGYNDLSMIKF----AG---MGVAMGNAQEP-VKKA 248 (279)
T ss_dssp GEEEEECSGGGHHHHHH----SS---EEEECTTSCHH-HHHH
T ss_pred HEEEECCChhhHHHHHH----cC---cEEEcCCCcHH-HHHh
Confidence 99999999999999997 78 68999976544 5444
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-14 Score=125.03 Aligned_cols=77 Identities=10% Similarity=-0.038 Sum_probs=62.8
Q ss_pred EEEEc-CCchHHHHHHHHHhhCCCCCCceEEcCC-------CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC
Q 024758 155 IYIVT-SNQSRFVETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (263)
Q Consensus 155 laI~T-nK~~~~a~~iL~~~~gl~~~f~~v~G~~-------~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 226 (263)
++++| +++.+.++.++++ ++ .+|+.+.|.. .+||+..+..+++++|++++++++|||+.+|+.+++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~-- 187 (231)
T 1wr8_A 113 LVIMRETINVETVREIINE-LN--LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKV-- 187 (231)
T ss_dssp EEECTTTSCHHHHHHHHHH-TT--CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHH--
T ss_pred EEEECCCCCHHHHHHHHHh-cC--CcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH--
Confidence 57888 8899999999995 75 5677663321 1389999999999999999999999999999999997
Q ss_pred cCCCCcEEEEcCC
Q 024758 227 ELDGWNLYLGNLF 239 (263)
Q Consensus 227 ~~Agi~~v~v~wG 239 (263)
+|+. ++|.||
T Consensus 188 --ag~~-v~~~~~ 197 (231)
T 1wr8_A 188 --VGYK-VAVAQA 197 (231)
T ss_dssp --SSEE-EECTTS
T ss_pred --cCCe-EEecCC
Confidence 8986 455554
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=8.6e-15 Score=127.57 Aligned_cols=87 Identities=7% Similarity=-0.146 Sum_probs=65.6
Q ss_pred CCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC---------C-CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHH
Q 024758 151 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---------T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 220 (263)
Q Consensus 151 ~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~---------~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~ 220 (263)
.++...+++ ++......+++. ++.. |+.+.+.. . .+|+..+..+++++|++++++++|||+.+|++
T Consensus 155 ~~~~ki~~~-~~~~~~~~~~~~-l~~~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~ 230 (274)
T 3fzq_A 155 QDIHKICLW-SNEKVFDEVKDI-LQDK--MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIV 230 (274)
T ss_dssp CCCCEEEEE-CCHHHHHHHHHH-HGGG--EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHH
T ss_pred cCeEEEEEE-cCHHHHHHHHHH-hhcc--eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHH
Confidence 344344444 777888888885 6543 45555432 1 28999999999999999999999999999999
Q ss_pred HhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 221 NVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 221 aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+++. || ++|.||...++ +.+.
T Consensus 231 m~~~----ag---~~vam~na~~~-~k~~ 251 (274)
T 3fzq_A 231 MFQA----SD---VTIAMKNSHQQ-LKDI 251 (274)
T ss_dssp HHHT----CS---EEEEETTSCHH-HHHH
T ss_pred HHHh----cC---ceEEecCccHH-HHHh
Confidence 9997 88 68889977655 4443
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.54 E-value=5.2e-17 Score=143.59 Aligned_cols=117 Identities=12% Similarity=0.025 Sum_probs=96.2
Q ss_pred CcccHHHHHHhCCCcEEEEcCCchHHH--H--HHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhC----CCCCC
Q 024758 140 LYPGVSDALKLASSRIYIVTSNQSRFV--E--TLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKP----EHQGL 207 (263)
Q Consensus 140 lypGv~e~L~~~g~~laI~TnK~~~~a--~--~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l----~~~~~ 207 (263)
.|+++.+.|+++|++ +|+||++.... . .+++. .|+..+|+.++|++ .||+|+++..+++++ |++|+
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~ 226 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAI-GGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKR 226 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECH-HHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccC-ChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcc
Confidence 677777766688999 99999987765 3 23463 67888899999876 359999999999999 99999
Q ss_pred cEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHh-----hhhHhHHHhhhccc
Q 024758 208 RLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLL-----YLYAVALFAKMDVL 262 (263)
Q Consensus 208 ~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~-----~~~~~~~~~~~~~~ 262 (263)
+++||||+. +||.+|++ +|+++++|+||++..+++.+ ...|..+++++.+|
T Consensus 227 ~~~~VGD~~~~Di~~A~~----aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 227 EILMVGDTLHTDILGGNK----FGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp GEEEEESCTTTHHHHHHH----HTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred eEEEECCCcHHHHHHHHH----cCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 999999995 99999998 99999999999998887752 24566666666654
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.53 E-value=1e-14 Score=129.12 Aligned_cols=89 Identities=8% Similarity=-0.022 Sum_probs=65.3
Q ss_pred hCCCcEEEE--cCCchHHHHHHHHHhhCCCCCCceEEcCCC-------C-CcHHHHHHHHhhCCCCCCcEEEEcCChhhH
Q 024758 150 LASSRIYIV--TSNQSRFVETLLRELAGVTITPDRLYGLGT-------G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (263)
Q Consensus 150 ~~g~~laI~--TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-------~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 219 (263)
+..+++.|+ +++.+...+.+.+. ++ ..+..+.+... + +|+..+..+++.+|++++++++|||+.||+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~-~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPA-WN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHH-HT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHH-hc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 456888988 44455556666664 65 34555655431 2 799999999999999999999999999999
Q ss_pred HHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 220 KNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 220 ~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
++.+. || ++|.+|... +++.+.
T Consensus 241 ~ml~~----ag---~~vam~na~-~~~k~~ 262 (283)
T 3dao_A 241 EMLQN----AG---ISYAVSNAR-QEVIAA 262 (283)
T ss_dssp HHHHH----SS---EEEEETTSC-HHHHHH
T ss_pred HHHHh----CC---CEEEcCCCC-HHHHHh
Confidence 99987 78 466667544 445544
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.6e-14 Score=126.06 Aligned_cols=69 Identities=12% Similarity=-0.061 Sum_probs=57.7
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCC-hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-----hhHhHHHhhhcc
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-----LYAVALFAKMDV 261 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-----~~~~~~~~~~~~ 261 (263)
+|+|+++..+++++|+++++++||||+ .+|+++|++ +|+++++|.||++..+++.+. ..|..++.++++
T Consensus 187 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~----~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~e 261 (268)
T 3qgm_A 187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKA----IGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKD 261 (268)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH----HTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHH
T ss_pred CCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHH----CCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHH
Confidence 499999999999999999999999999 599999998 999999999999988777521 245555555544
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.50 E-value=4.1e-14 Score=126.49 Aligned_cols=87 Identities=11% Similarity=-0.067 Sum_probs=61.6
Q ss_pred CcEEEEcCCchHHHHHHHHHhhC--CCC-CCceEEcCCC-------C-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHH
Q 024758 153 SRIYIVTSNQSRFVETLLRELAG--VTI-TPDRLYGLGT-------G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 221 (263)
Q Consensus 153 ~~laI~TnK~~~~a~~iL~~~~g--l~~-~f~~v~G~~~-------~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~a 221 (263)
.++.+.+ ++ ...+.+++. +. +.. .+..+.+... + +|+..+..+++++|++++++++|||+.+|+++
T Consensus 183 ~ki~~~~-~~-~~~~~~~~~-l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m 259 (304)
T 3l7y_A 183 FKLTLQV-KE-EESAQIMKA-IADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEM 259 (304)
T ss_dssp EEEEEEC-CG-GGHHHHHHH-HHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHH
T ss_pred EEEEEEc-CH-HHHHHHHHH-HHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHH
Confidence 4555555 33 334555553 43 444 4666665431 2 79999999999999999999999999999999
Q ss_pred hhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 222 VIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 222 A~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
++. || ++|.+|...+ ++.+.+
T Consensus 260 ~~~----ag---~~vam~na~~-~~k~~A 280 (304)
T 3l7y_A 260 LKL----AK---YSYAMANAPK-NVKAAA 280 (304)
T ss_dssp HHH----CT---EEEECTTSCH-HHHHHC
T ss_pred HHh----cC---CeEEcCCcCH-HHHHhc
Confidence 997 88 5788886544 455443
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-13 Score=122.10 Aligned_cols=102 Identities=10% Similarity=0.004 Sum_probs=70.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-------CC-CcHHHHHHHHhhCCCCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-------~~-pkp~~l~~~l~~l~~~~ 206 (263)
..+++++.++++ ....++.+ ++.++ ....+++........+..+.+.. .+ +|+..+..+++++|+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~ki~~-~~~~~-~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~ 218 (290)
T 3dnp_A 141 VQFVESLSDLLMDEPVSAPVIEV-YTEHD-IQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSM 218 (290)
T ss_dssp EEECSCHHHHHHHSCCCCSEEEE-ECCGG-GHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCG
T ss_pred ccccCCHHHHHhcCCCCceEEEE-eCCHH-HHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCH
Confidence 356788999887 45677755 44333 33445442112223455555432 12 79999999999999999
Q ss_pred CcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 207 ~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+++++|||+.+|+++++. ||+ +|.+|-.. +++.+.
T Consensus 219 ~~~i~~GD~~NDi~m~~~----ag~---~vam~na~-~~~k~~ 253 (290)
T 3dnp_A 219 DDVVAIGHQYDDLPMIEL----AGL---GVAMGNAV-PEIKRK 253 (290)
T ss_dssp GGEEEEECSGGGHHHHHH----SSE---EEECTTSC-HHHHHH
T ss_pred HHEEEECCchhhHHHHHh----cCC---EEEecCCc-HHHHHh
Confidence 999999999999999997 884 77778554 445444
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.46 E-value=3.8e-14 Score=124.32 Aligned_cols=85 Identities=8% Similarity=-0.070 Sum_probs=56.5
Q ss_pred EEcCCchHHHHHHHHHhhC--CCCCCceEEcCCC-------C-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC
Q 024758 157 IVTSNQSRFVETLLRELAG--VTITPDRLYGLGT-------G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~g--l~~~f~~v~G~~~-------~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 226 (263)
|++..+....+.+++. +. +...+..+.+... + +|+..+..+++.+|++++++++|||+.+|+++++.
T Consensus 155 i~~~~~~~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~-- 231 (279)
T 3mpo_A 155 AMFVDYPQVIEQVKAN-MPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKY-- 231 (279)
T ss_dssp EEEECCHHHHHHHHHH-CCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHH--
T ss_pred EEEcCCHHHHHHHHHH-HHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHh--
Confidence 3333556666777774 42 1223455554431 1 59999999999999999999999999999999997
Q ss_pred cCCCCcEEEEcCCCCChHHHHhhh
Q 024758 227 ELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 227 ~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
|| ++|.+|...++ +.+.+
T Consensus 232 --ag---~~vam~na~~~-~k~~A 249 (279)
T 3mpo_A 232 --AG---LGVAMGNAIDE-VKEAA 249 (279)
T ss_dssp --ST---EECBC---CCH-HHHHC
T ss_pred --cC---ceeeccCCCHH-HHHhc
Confidence 88 68888865544 55443
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.8e-14 Score=126.34 Aligned_cols=92 Identities=10% Similarity=-0.092 Sum_probs=64.2
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhC--CCCCCceEEcCC-------CC-CcHHHHHHHHhhCCCCCCcEEEEcCChhhH
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~g--l~~~f~~v~G~~-------~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 219 (263)
..++...++++++......+.+. +. +...+..+.+.. .+ +|+..+..+++.+|++++++++|||+.+|+
T Consensus 160 ~~~i~ki~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi 238 (285)
T 3pgv_A 160 PQGISKVFFTCEDHEHLLPLEQA-MNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDA 238 (285)
T ss_dssp CSSEEEEEEECSCHHHHHHHHHH-HHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred CCCceEEEEeCCCHHHHHHHHHH-HHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhH
Confidence 35566667776665555444432 21 122344555433 12 799999999999999999999999999999
Q ss_pred HHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 220 KNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 220 ~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
++.+. || ++|.+|... +++.+.+
T Consensus 239 ~ml~~----ag---~~vAm~Na~-~~vk~~A 261 (285)
T 3pgv_A 239 EMLSM----AG---KGCIMANAH-QRLKDLH 261 (285)
T ss_dssp HHHHH----SS---EEEECTTSC-HHHHHHC
T ss_pred HHHHh----cC---CEEEccCCC-HHHHHhC
Confidence 99997 88 688889654 4555544
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.41 E-value=3e-13 Score=109.59 Aligned_cols=88 Identities=15% Similarity=0.145 Sum_probs=74.9
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChh
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLA 217 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~ 217 (263)
.|+..++|+ ++|++++|+||++...++.++++ +|+..+|+. .+|||+.+..++++++++|++++||||+.+
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~~-----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 111 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKE-LGVEEIYTG-----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVV 111 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHH-TTCCEEEEC-----C--CHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCHhhccC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 466677887 78999999999999999999996 999876643 469999999999999999999999999999
Q ss_pred hHHHhhccCcCCCCcEEEEcCC
Q 024758 218 TLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 218 Di~aA~~~~~~Agi~~v~v~wG 239 (263)
|+.+|++ +|+.++ +.+|
T Consensus 112 Di~~a~~----ag~~~~-~~~~ 128 (162)
T 2p9j_A 112 DIEVMKK----VGFPVA-VRNA 128 (162)
T ss_dssp GHHHHHH----SSEEEE-CTTS
T ss_pred HHHHHHH----CCCeEE-ecCc
Confidence 9999997 899865 4343
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.1e-13 Score=121.76 Aligned_cols=88 Identities=6% Similarity=-0.104 Sum_probs=67.5
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhC--CCCCCceEEcCC-------C-CCcHHHHHHHHhhCCCCCCcEEEEcCChhhH
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLG-------T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~g--l~~~f~~v~G~~-------~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 219 (263)
+.+++++|+|++.. +..++++ ++ +..+|+.+.+.. . .+|+..+..+++++|++++++++|||+.+|+
T Consensus 144 ~~~~ki~i~~~~~~--~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~ 220 (271)
T 1rlm_A 144 DVLFKFSLNLPDEQ--IPLVIDK-LHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDA 220 (271)
T ss_dssp SCEEEEEEECCGGG--HHHHHHH-HHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CceEEEEEEcCHHH--HHHHHHH-HHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHH
Confidence 46789999998865 5566663 54 556677777652 1 2999999999999999999999999999999
Q ss_pred HHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 220 KNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 220 ~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
.+++. +|+ +|.+|... +++.+
T Consensus 221 ~m~~~----ag~---~va~~na~-~~~k~ 241 (271)
T 1rlm_A 221 EMLKM----ARY---SFAMGNAA-ENIKQ 241 (271)
T ss_dssp HHHHH----CSE---EEECTTCC-HHHHH
T ss_pred HHHHH----cCC---eEEeCCcc-HHHHH
Confidence 99997 887 44567544 44543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-13 Score=121.90 Aligned_cols=101 Identities=13% Similarity=0.150 Sum_probs=76.9
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCch----HHHHHHHHHhhCCCCCC--ceEEcCCCCCcHHHHHHHHhhCCCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQS----RFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~----~~a~~iL~~~~gl~~~f--~~v~G~~~~pkp~~l~~~l~~l~~~~~ 207 (263)
..+++||+.++|+ ++|++++|+||+++ ..+..-|++ +|+..++ ..+...+...|+.....+.+. |..
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~-Gy~-- 174 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKR-LGFNGVEESAFYLKKDKSAKAARFAEIEKQ-GYE-- 174 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHH-HTCSCCSGGGEEEESSCSCCHHHHHHHHHT-TEE--
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHH-cCcCcccccceeccCCCCChHHHHHHHHhc-CCC--
Confidence 4689999999999 89999999999976 589999996 9998777 455554444677766666554 432
Q ss_pred cEEEEcCChhhHHHhhc----cCcCCCCcEEEEcCCCC
Q 024758 208 RLHFVEDRLATLKNVIK----EPELDGWNLYLGNLFRF 241 (263)
Q Consensus 208 ~~l~VGDs~~Di~aA~~----~~~~Agi~~v~v~wGy~ 241 (263)
-++||||..+|+.++.. .+++++|..+++.||..
T Consensus 175 iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~ 212 (262)
T 3ocu_A 175 IVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKT 212 (262)
T ss_dssp EEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTTT
T ss_pred EEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCCC
Confidence 38999999999998321 11237888999999953
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.36 E-value=4.6e-13 Score=118.71 Aligned_cols=97 Identities=15% Similarity=0.092 Sum_probs=74.8
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCch----HHHHHHHHHhhCCCCCCc--eEEcCCCCCcHHHHHHHHhhCCCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQS----RFVETLLRELAGVTITPD--RLYGLGTGPKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~----~~a~~iL~~~~gl~~~f~--~v~G~~~~pkp~~l~~~l~~l~~~~~ 207 (263)
..++|||+.++|+ ++|++++|+||+++ ..+..-|++ +|+..+++ .+.+.+...|...... +.+.|. .
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~-L~~~gy--~ 174 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKR-LGFTGVNDKTLLLKKDKSNKSVRFKQ-VEDMGY--D 174 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHH-HTCCCCSTTTEEEESSCSSSHHHHHH-HHTTTC--E
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHH-cCcCccccceeEecCCCCChHHHHHH-HHhcCC--C
Confidence 4689999999999 89999999999976 499999996 99987774 5555443355444444 444443 3
Q ss_pred cEEEEcCChhhHHH--------hhccCcCCCCcEEEEcCCCC
Q 024758 208 RLHFVEDRLATLKN--------VIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 208 ~~l~VGDs~~Di~a--------A~~~~~~Agi~~v~v~wGy~ 241 (263)
-++||||+.+|+.+ +|+ ++|..+++.||..
T Consensus 175 iv~~iGD~~~Dl~~~~~~~~~~~r~----a~v~~~~~~fG~~ 212 (260)
T 3pct_A 175 IVLFVGDNLNDFGDATYKKSNAERR----DFVAKNSKAFGKK 212 (260)
T ss_dssp EEEEEESSGGGGCGGGTTCCHHHHH----HHHHHTGGGBTTT
T ss_pred EEEEECCChHHcCcccccCCHHHHH----HHHHHHHHHhCCC
Confidence 38999999999998 444 8899999999963
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.5e-12 Score=112.13 Aligned_cols=50 Identities=4% Similarity=-0.210 Sum_probs=43.6
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
|||..+..+++++|++++++++|||+.+|+.+++. +|+ +|.||...+ ++.
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~----ag~---~v~~~n~~~-~~~ 236 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRH----AAI---GVAMGQAKE-DVK 236 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSE---EEECTTSCH-HHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----cCc---eEEecCccH-HHH
Confidence 89999999999999999999999999999999997 886 567785544 444
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.29 E-value=3.1e-11 Score=105.03 Aligned_cols=52 Identities=8% Similarity=-0.121 Sum_probs=45.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+|+..+..+++++|++++++++|||+.+|+++++. || ++|.+|.. .+++.+.
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~----ag---~~vam~na-~~~~k~~ 245 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKA----AG---IGVAMGNA-SEKVQSV 245 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHH----SS---EEEECTTS-CHHHHHT
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHh----CC---CeEEeCCC-cHHHHHh
Confidence 89999999999999999999999999999999987 88 57788855 4556554
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.29 E-value=4.4e-12 Score=106.68 Aligned_cols=78 Identities=19% Similarity=0.240 Sum_probs=70.6
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhcc
Q 024758 146 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (263)
Q Consensus 146 e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 225 (263)
+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||+.+..+++++++++++++||||+.+|+.++++
T Consensus 56 ~~L~~~g~~~~ivTn~~~~~~~~~l~~-lgl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~- 128 (191)
T 3n1u_A 56 KLLMAAGIQVAIITTAQNAVVDHRMEQ-LGITHYYKGQ-----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQ- 128 (191)
T ss_dssp HHHHHTTCEEEEECSCCSHHHHHHHHH-HTCCEEECSC-----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH-
T ss_pred HHHHHCCCeEEEEeCcChHHHHHHHHH-cCCccceeCC-----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH-
Confidence 444589999999999999999999996 9998776644 799999999999999999999999999999999997
Q ss_pred CcCCCCcE
Q 024758 226 PELDGWNL 233 (263)
Q Consensus 226 ~~~Agi~~ 233 (263)
+|+.+
T Consensus 129 ---ag~~~ 133 (191)
T 3n1u_A 129 ---VGLGV 133 (191)
T ss_dssp ---SSEEE
T ss_pred ---CCCEE
Confidence 89875
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.27 E-value=2.6e-11 Score=105.19 Aligned_cols=52 Identities=10% Similarity=-0.100 Sum_probs=44.3
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+|...+..+++.+|++++++++|||+.||+.+++. ||+ +|.+| +..+++.+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~----ag~---~vam~-na~~~~k~~ 234 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSF----VGT---GVAMG-NAHEEVKRV 234 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHH----SSE---EEEET-TCCHHHHHT
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHh----CCc---EEEeC-CCcHHHHHh
Confidence 78999999999999999999999999999999987 887 44567 455666654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=8.3e-12 Score=104.33 Aligned_cols=81 Identities=17% Similarity=0.156 Sum_probs=70.5
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 144 v~e~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
+.+.|+++|++++|+||++...++.++++ +|+..+|+. .+|||+.+..+++++|+++++++||||+.+|+.+|+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~-lgl~~~~~~-----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~ 134 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCAT-LGITHLYQG-----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVME 134 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHH-HTCCEEECS-----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHT
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHH-cCCceeecC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 34444588999999999999999999996 999765542 369999999999999999999999999999999998
Q ss_pred ccCcCCCCcEE
Q 024758 224 KEPELDGWNLY 234 (263)
Q Consensus 224 ~~~~~Agi~~v 234 (263)
+ +|+.++
T Consensus 135 ~----ag~~~~ 141 (188)
T 2r8e_A 135 K----VGLSVA 141 (188)
T ss_dssp T----SSEEEE
T ss_pred H----CCCEEE
Confidence 7 898763
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.22 E-value=3.2e-11 Score=105.85 Aligned_cols=51 Identities=12% Similarity=-0.002 Sum_probs=44.3
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
+|+..+..+++.+|++++++++|||+.+|+.+++. +|+ +|.||.. .+++.+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~----ag~---~v~~~n~-~~~~~~ 240 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEE----AGL---RVAMENA-IEKVKE 240 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTT----CSE---EEECTTS-CHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHH----cCC---EEEecCC-CHHHHh
Confidence 89999999999999999999999999999999987 786 6788865 445554
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.13 E-value=4.5e-12 Score=106.34 Aligned_cols=103 Identities=8% Similarity=-0.074 Sum_probs=84.6
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
+.++||+.++|+ .+.++++|+||+++..++.+++. +|+..+|+.+++.+.- ...+.+.+.++.+|.++++|++|||
T Consensus 54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~-ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdD 132 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDN 132 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECS
T ss_pred EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHH-HCCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeC
Confidence 578999999999 44599999999999999999995 9999999999986532 2225677888999999999999999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCCC-CChHHHH
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLFR-FLCHILL 247 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wGy-~~~~~l~ 247 (263)
|..++.++.+ |||.+ ..|-. .+..+|.
T Consensus 133 s~~~~~~~~~----ngi~i--~~~~~~~~D~eL~ 160 (181)
T 2ght_A 133 SPASYVFHPD----NAVPV--ASWFDNMSDTELH 160 (181)
T ss_dssp CGGGGTTCTT----SBCCC--CCCSSCTTCCHHH
T ss_pred CHHHhccCcC----CEeEe--ccccCCCChHHHH
Confidence 9999998876 89985 66733 3334443
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=4.9e-12 Score=107.49 Aligned_cols=102 Identities=8% Similarity=-0.075 Sum_probs=85.0
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC--CcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~--pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
+.++||+.++|+ .+.++++|+||+++..++.+|+. +|+..+|+.+++.+.- .| +.+.+.++.+|.++++|++||
T Consensus 67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~-ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~vivD 144 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADL-LDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIVD 144 (195)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEEE
T ss_pred EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEEE
Confidence 578999999999 44499999999999999999996 9999999999987632 33 667888999999999999999
Q ss_pred CChhhHHHhhccCcCCCCcEEEEcC-CCCChHHHH
Q 024758 214 DRLATLKNVIKEPELDGWNLYLGNL-FRFLCHILL 247 (263)
Q Consensus 214 Ds~~Di~aA~~~~~~Agi~~v~v~w-Gy~~~~~l~ 247 (263)
||..++.++++ |||.+ +.| |-.+..+|.
T Consensus 145 Ds~~~~~~~~~----ngi~i--~~~~~~~~D~eL~ 173 (195)
T 2hhl_A 145 NSPASYIFHPE----NAVPV--QSWFDDMTDTELL 173 (195)
T ss_dssp SCGGGGTTCGG----GEEEC--CCCSSCTTCCHHH
T ss_pred CCHHHhhhCcc----CccEE--eeecCCCChHHHH
Confidence 99999999887 89987 444 334445554
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.11 E-value=5.8e-11 Score=98.45 Aligned_cols=89 Identities=8% Similarity=0.065 Sum_probs=69.1
Q ss_pred HHHHHhCCCcEEEEcCCchHHHHHHHHH-hhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 145 SDALKLASSRIYIVTSNQSRFVETLLRE-LAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 145 ~e~L~~~g~~laI~TnK~~~~a~~iL~~-~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
.+.|+++|++++|+||| ..++.++++ .+|+. .+.|. .+||+.+..+++++|+++++++||||+.+|+.+++
T Consensus 45 L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~----~~~g~--~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~ 116 (168)
T 3ewi_A 45 ISLLKKSGIEVRLISER--ACSKQTLSALKLDCK----TEVSV--SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLK 116 (168)
T ss_dssp HHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC----EECSC--SCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHH
T ss_pred HHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE----EEECC--CChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHH
Confidence 45555899999999999 788899993 04553 33343 48999999999999999999999999999999999
Q ss_pred ccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 224 KEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 224 ~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+ +|+.+ ++. +..+++.+.
T Consensus 117 ~----ag~~~-a~~---na~~~~k~~ 134 (168)
T 3ewi_A 117 R----VGLSA-VPA---DACSGAQKA 134 (168)
T ss_dssp H----SSEEE-ECT---TCCHHHHTT
T ss_pred H----CCCEE-EeC---ChhHHHHHh
Confidence 7 89874 452 234555443
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-10 Score=101.16 Aligned_cols=70 Identities=14% Similarity=-0.106 Sum_probs=50.9
Q ss_pred chHHHHHHHHHhhCCCCCCceEEcCC------CCCcHHHHHHHHhhCCCCC--CcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 162 QSRFVETLLRELAGVTITPDRLYGLG------TGPKVNVLKQLQKKPEHQG--LRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G~~------~~pkp~~l~~~l~~l~~~~--~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
....+...++. .+ |+.+.+.. ..+|+..+..+++++|+++ +++++|||+.+|+.+++. ||+
T Consensus 147 ~~~~~~~~l~~-~~----~~~~~s~~~~ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~----ag~-- 215 (259)
T 3zx4_A 147 EVEAVLEALEA-VG----LEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRA----VDL-- 215 (259)
T ss_dssp THHHHHHHHHH-TT----CEEEECSSSEEEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHT----SSE--
T ss_pred HHHHHHHHHHH-CC----cEEEecCceEEEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHh----CCC--
Confidence 44555566664 44 45555542 1378999999999999999 999999999999999987 785
Q ss_pred EEEcCCCCCh
Q 024758 234 YLGNLFRFLC 243 (263)
Q Consensus 234 v~v~wGy~~~ 243 (263)
+|..|-..+
T Consensus 216 -~va~~na~~ 224 (259)
T 3zx4_A 216 -AVYVGRGDP 224 (259)
T ss_dssp -EEECSSSCC
T ss_pred -eEEeCChhh
Confidence 344454333
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.07 E-value=3.5e-10 Score=100.02 Aligned_cols=51 Identities=18% Similarity=-0.067 Sum_probs=44.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
+|+..+..+++.+|++++++++|||+.+|+.+++. ||+ .++|.|+ .+++.+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~-~va~~~~---~~~~~~ 266 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEA----AGK-GVAMGNA---REDIKS 266 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHH----SSE-EEECTTC---CHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH----cCc-EEEEcCC---CHHHHh
Confidence 79999999999999999999999999999999997 898 6777654 344544
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.03 E-value=2.1e-09 Score=92.44 Aligned_cols=51 Identities=6% Similarity=-0.126 Sum_probs=42.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
+|+..+..+++++|++++++++|||+.+|+.+++. +|+. +++ |... +++.+
T Consensus 153 ~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~----ag~~-va~--~n~~-~~~k~ 203 (227)
T 1l6r_A 153 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQL----PVRK-ACP--ANAT-DNIKA 203 (227)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTS----SSEE-EEC--TTSC-HHHHH
T ss_pred CHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHH----cCce-EEe--cCch-HHHHH
Confidence 89999999999999999999999999999999987 8873 444 5443 34544
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.5e-10 Score=103.39 Aligned_cols=95 Identities=13% Similarity=0.086 Sum_probs=65.4
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC------------------------CCc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT------------------------GPK 191 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~------------------------~pk 191 (263)
.++|++.++|+ + |++++|+|++....+...++. +++. +.+.+... .+.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 177 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASM-IGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLSG 177 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH-TTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchh-hhhh---hhhcccccchhhhccccccceeEEecCHHHHhhhh
Confidence 67999999999 6 999999999998888888885 7662 33333210 011
Q ss_pred ---------------HHHHH------------HHHhhCCCCCCc----EEEEcCChhhHHHhhccCcCC----CCcEEEE
Q 024758 192 ---------------VNVLK------------QLQKKPEHQGLR----LHFVEDRLATLKNVIKEPELD----GWNLYLG 236 (263)
Q Consensus 192 ---------------p~~l~------------~~l~~l~~~~~~----~l~VGDs~~Di~aA~~~~~~A----gi~~v~v 236 (263)
|..+. .+++ ++++++ +++|||+.+|+.+++. | |+. |+|
T Consensus 178 ~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--gi~~~~~~~~via~GDs~NDi~ml~~----A~~~~g~~-vam 250 (332)
T 1y8a_A 178 EELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--GYCESKGIDFPVVVGDSISDYKMFEA----ARGLGGVA-IAF 250 (332)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--HHHHHHTCSSCEEEECSGGGHHHHHH----HHHTTCEE-EEE
T ss_pred HHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--ccChhhcCceEEEEeCcHhHHHHHHH----HhhcCCeE-EEe
Confidence 22222 1122 567788 9999999999999987 7 885 455
Q ss_pred cCCCCChHHHHhh
Q 024758 237 NLFRFLCHILLLY 249 (263)
Q Consensus 237 ~wGy~~~~~l~~~ 249 (263)
++ .+++.+.
T Consensus 251 -na---~~~lk~~ 259 (332)
T 1y8a_A 251 -NG---NEYALKH 259 (332)
T ss_dssp -SC---CHHHHTT
T ss_pred -cC---CHHHHhh
Confidence 43 4555543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.89 E-value=1.1e-09 Score=95.23 Aligned_cols=60 Identities=8% Similarity=-0.194 Sum_probs=49.0
Q ss_pred CcHHHHHHHHhhCCC-CCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhh
Q 024758 190 PKVNVLKQLQKKPEH-QGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAK 258 (263)
Q Consensus 190 pkp~~l~~~l~~l~~-~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~ 258 (263)
.|...+..+++.+|+ +++++++|||+.||+.+.+. +|+ +|.+|....+++.+. |..+..+
T Consensus 179 sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~----ag~---~va~gna~~~~~~~~--a~~v~~~ 239 (249)
T 2zos_A 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEV----VDK---VFIVGSLKHKKAQNV--SSIIDVL 239 (249)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTT----SSE---EEEESSCCCTTEEEE--SSHHHHH
T ss_pred ChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHh----CCc---EEEeCCCCccccchh--ceEEecc
Confidence 799999999999998 99999999999999999986 786 577787765667653 5555544
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.80 E-value=6.6e-09 Score=91.70 Aligned_cols=51 Identities=10% Similarity=-0.081 Sum_probs=42.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
+|+..+..+++.+|++++++++|||+.+|+.+++. +|+ +|.+|... +++.+
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~---~va~~n~~-~~~~~ 248 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEY----AGV---GVAVDNAI-PSVKE 248 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSE---EEECTTSC-HHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHH----CCc---EEEecCCc-HHHHh
Confidence 89999999999999999999999999999999987 886 45556444 44544
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.76 E-value=1e-07 Score=88.70 Aligned_cols=115 Identities=13% Similarity=0.149 Sum_probs=82.2
Q ss_pred hcCCHHHHHHHHHHHHHHHHhhhhh------------------ccccCCCCcccHHHHHH---hCCCcEEEEcCCchHHH
Q 024758 108 WSENREALIELSGKVRDEWMDTDFT------------------TWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFV 166 (263)
Q Consensus 108 ~~~~~~~~~~~~~~~r~~y~~~~~~------------------~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a 166 (263)
.|++++++++....+.+.....-.. .+....++|||+.++++ ++|++++|||+-...++
T Consensus 172 ~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v 251 (385)
T 4gxt_A 172 KNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIV 251 (385)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHH
T ss_pred cCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHH
Confidence 4889998888888777654321100 01112358999999999 99999999999999999
Q ss_pred HHHHHHhhCCCC--CCceEEcCC-----C---------------C-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhh
Q 024758 167 ETLLRELAGVTI--TPDRLYGLG-----T---------------G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (263)
Q Consensus 167 ~~iL~~~~gl~~--~f~~v~G~~-----~---------------~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 223 (263)
+.+.++ +|+.. ..+.|+|.. . + .|++.|++.++. ......++++|||.+|+.+-+
T Consensus 252 ~~ia~~-lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~ 329 (385)
T 4gxt_A 252 RAFATD-TNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLK 329 (385)
T ss_dssp HHHHHC-TTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHHH
T ss_pred HHHHHH-hCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHh
Confidence 999995 88642 224555521 0 0 277888776654 244556899999999999987
Q ss_pred c
Q 024758 224 K 224 (263)
Q Consensus 224 ~ 224 (263)
+
T Consensus 330 ~ 330 (385)
T 4gxt_A 330 E 330 (385)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.73 E-value=6.3e-08 Score=86.60 Aligned_cols=51 Identities=10% Similarity=-0.012 Sum_probs=42.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
+|+..+..+++.+|++++++++|||+.+|+.+++. +|+. ++ +|... +++.+
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~~-va--~~na~-~~~k~ 274 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSN----FKYS-FA--VANAT-DSAKS 274 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHS----CSEE-EE--CTTCC-HHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----cCCe-EE--EcCCc-HHHHh
Confidence 89999999999999999999999999999999987 8873 34 55443 34543
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.71 E-value=2.4e-08 Score=88.79 Aligned_cols=99 Identities=11% Similarity=0.013 Sum_probs=70.7
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-----C-------------CCcHHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----T-------------GPKVNVLK 196 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-----~-------------~pkp~~l~ 196 (263)
.++.||+.++++ ++|+++.|+|......++.++++ +|+......|++.. . ..++.+..
T Consensus 140 i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~-~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHH-TTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHH-cCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence 578999999999 89999999999999999999996 99875444444321 0 13444444
Q ss_pred HH--HhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 197 QL--QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 197 ~~--l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
+. ...+.....+++||||+.||+-+++. ..-.-+++..||-
T Consensus 219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~----l~~advgiaiGfl 261 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGDSQGDLRMADG----VANVEHILKIGYL 261 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEESSGGGGGTTTT----CSCCSEEEEEEEE
T ss_pred HHHHHHHhhccCCEEEEEeCcHHHHHHHhC----ccccCeEEEEEec
Confidence 32 22334456789999999999998764 2223357777874
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.67 E-value=6.5e-08 Score=95.64 Aligned_cols=88 Identities=17% Similarity=0.142 Sum_probs=72.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-CCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~~pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
.++.|++.+.|+ ++|+++.++|+++...++.+.++ +|++. ++..- ...|.+.+.++.++ ++++|||
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~~----~~~~~~P~~K~~~v~~l~~~-----~~v~~vG 525 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDL----VIAEVLPHQKSEEVKKLQAK-----EVVAFVG 525 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSE----EECSCCTTCHHHHHHHHTTT-----CCEEEEE
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCE----EEEeCCHHhHHHHHHHHhhC-----CeEEEEe
Confidence 468999999999 89999999999999999999996 99963 44332 23677777766543 7899999
Q ss_pred CChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 214 DRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 214 Ds~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
|+.||+.+.++ || +|+.+|-++
T Consensus 526 Dg~ND~~al~~----A~---vgiamg~g~ 547 (645)
T 3j08_A 526 DGINDAPALAQ----AD---LGIAVGSGS 547 (645)
T ss_dssp CSSSCHHHHHH----SS---EEEEECCCS
T ss_pred CCHhHHHHHHh----CC---EEEEeCCCc
Confidence 99999999987 77 788888544
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.61 E-value=4.9e-08 Score=85.93 Aligned_cols=54 Identities=9% Similarity=-0.167 Sum_probs=42.2
Q ss_pred CcHHHHHHHHhhCC-CCCCc--EEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 190 PKVNVLKQLQKKPE-HQGLR--LHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 190 pkp~~l~~~l~~l~-~~~~~--~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
+|+..+..+++.+| +++++ +++|||+.+|+.+.+. +|+ .|+|.++....+++.+
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~-~va~~n~~~~~~~~~~ 245 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEV----MDY-AVIVKGLNREGVHLHD 245 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHT----SSE-EEECCCCC--------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHh----CCc-eEEecCCCccchhhcc
Confidence 89999999999999 99999 9999999999999987 888 4888888765666643
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.47 E-value=8.5e-08 Score=88.93 Aligned_cols=80 Identities=11% Similarity=0.113 Sum_probs=63.8
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCc-eEEcCCCCCcHHHHHHHHhhC-CCCCCcEEE
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPD-RLYGLGTGPKVNVLKQLQKKP-EHQGLRLHF 211 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~-~f~-~v~G~~~~pkp~~l~~~l~~l-~~~~~~~l~ 211 (263)
.+.+-||+.++|+ .+++.++|.|+..+..+..+++. ++... +|. .+++.+.-+. ...+-++.+ |.+++++++
T Consensus 73 ~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~-LDp~~~~f~~ri~sr~~~g~--~~~KdL~~L~~~dl~~vii 149 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGS--LAQKSLRRLFPCDTSMVVV 149 (372)
T ss_dssp EEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HCTTSCSSSSCEECTTTSSC--SSCCCGGGTCSSCCTTEEE
T ss_pred EEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHH-hccCCceeeeEEEEecCCCC--cceecHHHhcCCCCceEEE
Confidence 4678999999999 89999999999999999999995 99886 787 7886543211 122345555 889999999
Q ss_pred EcCChhhH
Q 024758 212 VEDRLATL 219 (263)
Q Consensus 212 VGDs~~Di 219 (263)
|.|++.-.
T Consensus 150 iDd~~~~~ 157 (372)
T 3ef0_A 150 IDDRGDVW 157 (372)
T ss_dssp EESCSGGG
T ss_pred EeCCHHHc
Confidence 99998644
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=3.2e-07 Score=88.48 Aligned_cols=94 Identities=12% Similarity=0.174 Sum_probs=76.0
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhC-------------CCCCCceEEcCCCCCcHHH----------
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------------VTITPDRLYGLGTGPKVNV---------- 194 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~g-------------l~~~f~~v~G~~~~pkp~~---------- 194 (263)
=|++..+|+ +.| ++.++||.+..++..+++..+| |..|||.|+..-.||..-.
T Consensus 248 dp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~Vd~ 326 (555)
T 2jc9_A 248 DGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDT 326 (555)
T ss_dssp CTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEEET
T ss_pred ChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEeec
Confidence 478999988 889 9999999999999999996337 5689999776443332111
Q ss_pred ------------------------HHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcC
Q 024758 195 ------------------------LKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 195 ------------------------l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~w 238 (263)
+..+++.+|..+.+++||||.. .||..++. .+|+++++|--
T Consensus 327 ~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk---~~GWrTiLViP 392 (555)
T 2jc9_A 327 KTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKK---RQGWRTFLVIP 392 (555)
T ss_dssp TTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHH---HHCCEEEEECT
T ss_pred CCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHh---hcCeEEEEEEe
Confidence 4788888899999999999997 68999973 28999999965
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=1.5e-06 Score=79.26 Aligned_cols=111 Identities=11% Similarity=0.119 Sum_probs=73.2
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhh---------ccccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh--
Q 024758 109 SENREALIELSGKVRDEWMDTDFT---------TWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA-- 174 (263)
Q Consensus 109 ~~~~~~~~~~~~~~r~~y~~~~~~---------~~~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~-- 174 (263)
|++.+++++..+++.+.-...... .......+||++.++++ ++|+++.|||..++.+++.+-+. .
T Consensus 104 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~-~~~ 182 (327)
T 4as2_A 104 GFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAAD-PRY 182 (327)
T ss_dssp TSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTC-GGG
T ss_pred CCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhh-ccc
Confidence 788888877777665432110000 01112368999999999 89999999999999999999873 4
Q ss_pred CCCCCCceEEcCCC------------------------------------------C-CcHHHHHHHHhhCCCCCCcEEE
Q 024758 175 GVTITPDRLYGLGT------------------------------------------G-PKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 175 gl~~~f~~v~G~~~------------------------------------------~-pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
|....-+.|+|... + -||..|...++. | ...++.
T Consensus 183 ~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~-g--~~Pi~a 259 (327)
T 4as2_A 183 GYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDR-W--KRPILV 259 (327)
T ss_dssp SCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCS-S--CCCSEE
T ss_pred ccCCCHHHeEeeeeeeeccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHhh-C--CCCeEE
Confidence 22223466777420 1 267777776532 2 234699
Q ss_pred EcCC-hhhHHHhh
Q 024758 212 VEDR-LATLKNVI 223 (263)
Q Consensus 212 VGDs-~~Di~aA~ 223 (263)
+||| -.|..+=.
T Consensus 260 ~Gns~dgD~~ML~ 272 (327)
T 4as2_A 260 AGDTPDSDGYMLF 272 (327)
T ss_dssp EESCHHHHHHHHH
T ss_pred ecCCCCCCHHHHh
Confidence 9999 58977654
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=1.9e-07 Score=85.97 Aligned_cols=68 Identities=12% Similarity=-0.026 Sum_probs=49.5
Q ss_pred CCcHHHHHHHHhhC----------------------CC-----CCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCC
Q 024758 189 GPKVNVLKQLQKKP----------------------EH-----QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 189 ~pkp~~l~~~l~~l----------------------~~-----~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
||.|.++..+++.+ |. ++++++||||+. +||++|++ +|+++|+|.||+
T Consensus 246 KP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~----aG~~ti~V~~G~ 321 (352)
T 3kc2_A 246 KPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQN----YGWNSCLVKTGV 321 (352)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHH----HTCEEEECSSSS
T ss_pred CCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHH----cCCEEEEEccCC
Confidence 58888888775543 22 679999999999 59999998 999999999999
Q ss_pred CChHHHHhhhhHhHHHhhhc
Q 024758 241 FLCHILLLYLYAVALFAKMD 260 (263)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~~ 260 (263)
+..+.......|..+++++.
T Consensus 322 ~~~~~~~~~~~pd~vi~~l~ 341 (352)
T 3kc2_A 322 YNEGDDLKECKPTLIVNDVF 341 (352)
T ss_dssp CCTTCCCTTCCCSEECSSHH
T ss_pred CCcccccccCCCCEEECCHH
Confidence 87654222334444444443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.88 E-value=4.8e-05 Score=76.07 Aligned_cols=88 Identities=17% Similarity=0.123 Sum_probs=71.4
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC-CCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~~pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
.++.|++.+.++ ++|+++.++|+.+...++.+.++ +|++ .++..- ...|.+.+..+.++ ++++|||
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~----~~~~~~~P~~K~~~v~~l~~~-----~~v~~vG 603 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKKLQAK-----EVVAFVG 603 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCTTCHHHHHHHHTTT-----CCEEEEE
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCc----EEEccCCHHHHHHHHHHHhcC-----CeEEEEE
Confidence 468899999999 89999999999999999999996 9986 344433 23677777776543 7899999
Q ss_pred CChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 214 DRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 214 Ds~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
|+.||+.+-++ || +|+..|-++
T Consensus 604 Dg~ND~~al~~----A~---vgiamg~g~ 625 (723)
T 3j09_A 604 DGINDAPALAQ----AD---LGIAVGSGS 625 (723)
T ss_dssp CSSTTHHHHHH----SS---EEEECCCCS
T ss_pred CChhhHHHHhh----CC---EEEEeCCCc
Confidence 99999999987 77 678888443
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00014 Score=63.37 Aligned_cols=65 Identities=17% Similarity=0.312 Sum_probs=42.9
Q ss_pred hCCCcEEEEcC---CchHHHHHHHHHhhCCC-CCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEE-EEcCChhhHHHhh
Q 024758 150 LASSRIYIVTS---NQSRFVETLLRELAGVT-ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH-FVEDRLATLKNVI 223 (263)
Q Consensus 150 ~~g~~laI~Tn---K~~~~a~~iL~~~~gl~-~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l-~VGDs~~Di~aA~ 223 (263)
++|++++++|| ++.......+++ +|+. ..++.|+++. ......+++ +.+. ++. .+|.. ......+
T Consensus 44 ~~g~~~~~~Tn~~~r~~~~~~~~l~~-lg~~~~~~~~ii~~~-----~~~~~~l~~-~~~~-~v~~~lg~~-~l~~~l~ 113 (284)
T 2hx1_A 44 AQGQDYYIVTNDASRSPEQLADSYHK-LGLFSITADKIISSG-----MITKEYIDL-KVDG-GIVAYLGTA-NSANYLV 113 (284)
T ss_dssp HTTCEEEEEECCCSSCHHHHHHHHHH-TTCTTCCGGGEEEHH-----HHHHHHHHH-HCCS-EEEEEESCH-HHHHTTC
T ss_pred HCCCEEEEEeCCCCcCHHHHHHHHHH-CCcCCCCHhhEEcHH-----HHHHHHHHh-hcCC-cEEEEecCH-HHHHHHH
Confidence 68999999998 778888888996 9998 7777777632 222233332 2223 667 78875 4444443
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00015 Score=68.86 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=74.7
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh--------CCCCCCceEEcCCCCCc------------------
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA--------GVTITPDRLYGLGTGPK------------------ 191 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~--------gl~~~f~~v~G~~~~pk------------------ 191 (263)
=|.+..+|+ +.|.++.++||.+-.++..+++..+ .|..+||.|+....||.
T Consensus 188 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l 267 (470)
T 4g63_A 188 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTM 267 (470)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCCE
T ss_pred CHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCcc
Confidence 478888888 8899999999999999999999655 47789999997532210
Q ss_pred --------H-----HHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcC
Q 024758 192 --------V-----NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 192 --------p-----~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~w 238 (263)
+ -.+..+.+.+|....+++||||+. .||..++. ..|+++++|--
T Consensus 268 ~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk---~~gWrT~~Ii~ 325 (470)
T 4g63_A 268 TNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKK---DCNWRTALVVE 325 (470)
T ss_dssp EECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHH---SCCCEEEEECT
T ss_pred cccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhh---ccCCeEEEEhH
Confidence 1 123445566788888999999997 69988886 48999999954
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.55 E-value=9.5e-05 Score=74.10 Aligned_cols=90 Identities=12% Similarity=0.130 Sum_probs=68.6
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
-++-|++.+.++ ++|+++.++|+.+...++.+.++ +|++. ++..-. ..|.+.+..+.+ ....++|||
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~-lgi~~----v~a~~~P~~K~~~v~~l~~----~g~~V~~vG 623 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGT-LGIKK----VVAEIMPEDKSRIVSELKD----KGLIVAMAG 623 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH-HTCCC----EECSCCHHHHHHHHHHHHH----HSCCEEEEE
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCE----EEEecCHHHHHHHHHHHHh----cCCEEEEEE
Confidence 367799999999 88999999999999999999996 99964 333221 134455555443 456799999
Q ss_pred CChhhHHHhhccCcCCCCcEEEEcCCCCCh
Q 024758 214 DRLATLKNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 214 Ds~~Di~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
|+.||+.+-++ |+ +|+..|-++.
T Consensus 624 DG~ND~paL~~----Ad---vGIAmg~g~d 646 (736)
T 3rfu_A 624 DGVNDAPALAK----AD---IGIAMGTGTD 646 (736)
T ss_dssp CSSTTHHHHHH----SS---EEEEESSSCS
T ss_pred CChHhHHHHHh----CC---EEEEeCCccH
Confidence 99999999887 77 5777775443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00047 Score=71.21 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=67.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc----e-----------------------EEcCC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----R-----------------------LYGLG 187 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~----~-----------------------v~G~~ 187 (263)
-++.||+.++++ ++|+++.++|+.....++.+.++ +|+....+ . +++.-
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~-lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~ 680 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 680 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence 367899999999 89999999999999999999996 99975432 1 22221
Q ss_pred C-CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 188 T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 188 ~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
+ ..|.+.+..+.++ .+.++||||+.||+.+-++ |++ |+.-|
T Consensus 681 ~P~~K~~~v~~l~~~----g~~v~~~GDG~ND~~alk~----Adv---giamg 722 (995)
T 3ar4_A 681 EPSHKSKIVEYLQSY----DEITAMTGDGVNDAPALKK----AEI---GIAMG 722 (995)
T ss_dssp CSSHHHHHHHHHHTT----TCCEEEEECSGGGHHHHHH----STE---EEEET
T ss_pred CHHHHHHHHHHHHHC----CCEEEEEcCCchhHHHHHH----CCe---EEEeC
Confidence 1 1355555554443 4789999999999999987 786 44446
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.44 E-value=1.7e-05 Score=67.60 Aligned_cols=103 Identities=11% Similarity=-0.055 Sum_probs=76.9
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCC-CCCceEEcCCC-CCcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~-~~f~~v~G~~~-~pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
+..-||+.++|+ .+++.++|.|+..+..++.+++. ++.. .+|+..+..+. ...+..+.+.++.+|.++++||+|.
T Consensus 58 v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~-LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiID 136 (204)
T 3qle_A 58 TAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEK-LDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIID 136 (204)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-TSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEE
T ss_pred EEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEE
Confidence 467799999999 89999999999999999999996 8886 48887665442 1122224556778899999999999
Q ss_pred CChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 214 DRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 214 Ds~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
|+..-+....+ +||.+. .|--...++|.
T Consensus 137 Dsp~~~~~~p~----N~I~I~--~~~~~~D~eL~ 164 (204)
T 3qle_A 137 TDPNSYKLQPE----NAIPME--PWNGEADDKLV 164 (204)
T ss_dssp SCTTTTTTCGG----GEEECC--CCCSSCCCHHH
T ss_pred CCHHHHhhCcc----CceEee--eECCCCChhHH
Confidence 99998865443 677764 44323344554
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00027 Score=60.66 Aligned_cols=52 Identities=13% Similarity=-0.076 Sum_probs=43.4
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+|+..+..+++.+|++++++++|||+.+|+.+.+. +|+ +|.+|.. .+++.+.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~----~g~---~va~~na-~~~~k~~ 213 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFET----SAR---GVIVRNA-QPELLHW 213 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTS----SSE---EEECTTC-CHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhc----cCc---EEEEcCC-cHHHHHH
Confidence 89999999999999999999999999999999986 776 4555644 4556553
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00051 Score=55.07 Aligned_cols=35 Identities=17% Similarity=0.202 Sum_probs=25.2
Q ss_pred ccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhhCCC
Q 024758 142 PGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVT 177 (263)
Q Consensus 142 pGv~e~L~---~~g~~laI~TnK~---~~~a~~iL~~~~gl~ 177 (263)
|++.++|+ ++|++++|+|+.+ ...+...+++ +|+.
T Consensus 27 ~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~-~gi~ 67 (142)
T 2obb_A 27 PFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-RGLE 67 (142)
T ss_dssp TTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-TTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHH-cCCC
Confidence 55666666 7899999999987 4455566664 6774
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=96.46 E-value=0.014 Score=60.58 Aligned_cols=90 Identities=12% Similarity=0.109 Sum_probs=64.3
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC------------------------c----------
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------------------------D---------- 181 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f------------------------~---------- 181 (263)
+|-|++.+.++ ++|+++.++|+-....+..+.++ +|+...- .
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 57799999999 89999999999999999999996 9996320 1
Q ss_pred ---------------eEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCC
Q 024758 182 ---------------RLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 182 ---------------~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
.+++..+. .|-.++..+. +.| +.+.||||+.||+.+-++ |++ |+.-|-
T Consensus 678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq-~~g---~~V~~iGDG~ND~paLk~----Adv---GIAmg~ 741 (1028)
T 2zxe_A 678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQ-RQG---AIVAVTGDGVNDSPALKK----ADI---GVAMGI 741 (1028)
T ss_dssp CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHH-HTT---CCEEEEECSGGGHHHHHH----SSE---EEEESS
T ss_pred CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHH-hCC---CEEEEEcCCcchHHHHHh----CCc---eEEeCC
Confidence 12222111 2334444433 333 578999999999999987 785 555564
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.011 Score=60.61 Aligned_cols=89 Identities=12% Similarity=0.025 Sum_probs=65.8
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC-c------------------------eEEcCCC-C
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP-D------------------------RLYGLGT-G 189 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f-~------------------------~v~G~~~-~ 189 (263)
+|-|++.+.++ ++|+++.++|+-....++.+-++ +||.... + .|++.-+ .
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~-lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQ-LGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ 613 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHH-HTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHH-cCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence 67899999999 89999999999999999999996 9996311 0 1222211 1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.|.+.+..+.+ .| +.+.|+||+.||.-+=++ |++ |+.-|
T Consensus 614 ~K~~iV~~Lq~-~g---~~Vam~GDGvNDapaLk~----Adv---GIAmg 652 (920)
T 1mhs_A 614 HKYNVVEILQQ-RG---YLVAMTGDGVNDAPSLKK----ADT---GIAVE 652 (920)
T ss_dssp HHHHHHHHHHT-TT---CCCEECCCCGGGHHHHHH----SSE---EEEET
T ss_pred HHHHHHHHHHh-CC---CeEEEEcCCcccHHHHHh----CCc---Ccccc
Confidence 35666666544 33 678999999999999887 775 44445
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.001 Score=57.37 Aligned_cols=52 Identities=10% Similarity=-0.046 Sum_probs=38.3
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCC----hhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDR----LATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAV 253 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs----~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~ 253 (263)
.|...+..+++ ++++++.|||+ .||+.+-+. +|. +.+|++++++....+...
T Consensus 187 ~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~----a~~----~g~~v~n~~~~~~~~~~~ 242 (246)
T 3f9r_A 187 DKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTD----KRT----IGHKVTSYKDTIAEVEKI 242 (246)
T ss_dssp SGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTC----TTS----EEEECSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhC----CCc----cEEEeCCHHHHHHHHHHH
Confidence 67888888776 88999999996 999999875 553 334556677766555443
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0021 Score=49.82 Aligned_cols=15 Identities=20% Similarity=0.443 Sum_probs=13.7
Q ss_pred cEEEEecCcccccCH
Q 024758 3 DLYALDFDGVICDSC 17 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (263)
|+|+||+||||+|+-
T Consensus 2 k~i~~DlDGTL~~~~ 16 (126)
T 1xpj_A 2 KKLIVDLDGTLTQAN 16 (126)
T ss_dssp CEEEECSTTTTBCCC
T ss_pred CEEEEecCCCCCCCC
Confidence 799999999999875
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.04 E-value=0.026 Score=58.50 Aligned_cols=103 Identities=12% Similarity=0.029 Sum_probs=67.2
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC------------------------c-eEEcCCC-
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------------------------D-RLYGLGT- 188 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f------------------------~-~v~G~~~- 188 (263)
-+|-|++.+.++ ++|+++.++|+.+...+..+.++ +|+...- . .+-|.+.
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAAS-VGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence 367899999999 89999999999999999999996 9984210 0 1111110
Q ss_pred --------------------CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 189 --------------------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 189 --------------------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
.-.|+--..+.+.+.-....++|+||+.||+.+=+. ||+ ||.-|-+..++..+
T Consensus 682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~----A~v---GIAMg~ng~d~aK~ 754 (1034)
T 3ixz_A 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKK----ADI---GVAMGIAGSDAAKN 754 (1034)
T ss_pred hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHH----CCe---eEEeCCccCHHHHH
Confidence 012322222222222223558999999999999887 774 66667444444444
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0025 Score=50.50 Aligned_cols=17 Identities=35% Similarity=0.536 Sum_probs=14.8
Q ss_pred CCcEEEEecCcccccCH
Q 024758 1 MEDLYALDFDGVICDSC 17 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~ 17 (263)
|.|+++||+||||+++-
T Consensus 8 ~~k~v~~DlDGTL~~~~ 24 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGK 24 (162)
T ss_dssp HCCEEEECCTTTTSCSE
T ss_pred ceeEEEEecCcceECCc
Confidence 46899999999999864
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.76 E-value=0.0023 Score=54.55 Aligned_cols=50 Identities=8% Similarity=-0.134 Sum_probs=35.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
.|...+..+ +|+++++++.||| +.||+.+-+. +|.. ++.-| +..+++.+.
T Consensus 188 ~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~----a~~a--g~av~-Na~~~vk~~ 241 (246)
T 2amy_A 188 DKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTD----PRTM--GYSVT-APEDTRRIC 241 (246)
T ss_dssp SGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHC----TTEE--EEECS-SHHHHHHHH
T ss_pred chHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHh----CCcc--eEEee-CCCHHHHHH
Confidence 677777777 8999999999999 9999999975 6643 44444 334555544
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.0034 Score=54.17 Aligned_cols=50 Identities=10% Similarity=-0.115 Sum_probs=39.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
.|...+..+ +|+++++++.||| +.||+.+-+. +|...++| | +..+++.+.
T Consensus 197 sKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~----~~~~g~av--~-NA~~~~k~~ 250 (262)
T 2fue_A 197 DKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFAD----PRTVGHSV--V-SPQDTVQRC 250 (262)
T ss_dssp STTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHS----TTSEEEEC--S-SHHHHHHHH
T ss_pred CHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhc----CccCcEEe--c-CCCHHHHHh
Confidence 688888887 8999999999999 9999999986 77666666 4 445556544
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=95.09 E-value=0.014 Score=49.84 Aligned_cols=29 Identities=10% Similarity=-0.067 Sum_probs=20.2
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHH
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARV 30 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~ 30 (263)
|+.+|+|||||||+++-..+ .....++++
T Consensus 2 ~~~li~~DlDGTLl~~~~~~-~~~~~~l~~ 30 (244)
T 1s2o_A 2 RQLLLISDLDNTWVGDQQAL-EHLQEYLGD 30 (244)
T ss_dssp CSEEEEECTBTTTBSCHHHH-HHHHHHHHT
T ss_pred CCeEEEEeCCCCCcCCHHHH-HHHHHHHHH
Confidence 34599999999999987544 344444544
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=94.72 E-value=0.012 Score=48.22 Aligned_cols=16 Identities=44% Similarity=0.630 Sum_probs=14.1
Q ss_pred CcEEEEecCcccccCH
Q 024758 2 EDLYALDFDGVICDSC 17 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (263)
.|+|+||+||||+|+.
T Consensus 26 ik~vifD~DGTL~~~~ 41 (188)
T 2r8e_A 26 IRLLILDVDGVLSDGL 41 (188)
T ss_dssp CSEEEECCCCCCBCSE
T ss_pred CCEEEEeCCCCcCCCC
Confidence 5899999999999963
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.25 E-value=0.036 Score=56.54 Aligned_cols=84 Identities=12% Similarity=0.114 Sum_probs=61.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC---Cce-----------------------EEcCCCC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT---PDR-----------------------LYGLGTG 189 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~---f~~-----------------------v~G~~~~ 189 (263)
+|-|++.+.++ ++|+++.++|+-....++.+-++ +|+... -.. |++.-..
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~-lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHT-TTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHH-hCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 57899999999 89999999999999999999996 999531 011 1211111
Q ss_pred -CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCC
Q 024758 190 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (263)
Q Consensus 190 -pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi 231 (263)
.|.+.+..+.++ | +.+.|+||+.||.-+=++ |++
T Consensus 567 ~~K~~iV~~lq~~-g---~~Vam~GDGvNDapaLk~----Adv 601 (885)
T 3b8c_A 567 EHKYEIVKKLQER-K---HIVGMTGDGVNDAPALKK----ADI 601 (885)
T ss_dssp HHHHHHHHHHHHT-T---CCCCBCCCSSTTHHHHHH----SSS
T ss_pred HHHHHHHHHHHHC-C---CeEEEEcCCchhHHHHHh----CCE
Confidence 345566555443 3 568999999999999887 675
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=93.83 E-value=0.057 Score=40.50 Aligned_cols=29 Identities=17% Similarity=0.000 Sum_probs=20.7
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAGVTITP 180 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f 180 (263)
+.|++ +|..+......+.+.+ ++|+..+|
T Consensus 109 ~~G~~-~i~~~~~~~~~~~l~~-~~~~~~~f 137 (137)
T 2pr7_A 109 EAGLV-GVYYQQFDRAVVEIVG-LFGLEGEF 137 (137)
T ss_dssp HHTCE-EEECSCHHHHHHHHHH-HHTCCSCC
T ss_pred HCCCE-EEEeCChHHHHHHHHH-HhCCccCC
Confidence 67884 6666666677777777 48888775
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=93.38 E-value=0.033 Score=45.28 Aligned_cols=67 Identities=12% Similarity=0.076 Sum_probs=36.0
Q ss_pred ccHHHHHH--hCCCcEEEEcCCch-HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhh
Q 024758 142 PGVSDALK--LASSRIYIVTSNQS-RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLAT 218 (263)
Q Consensus 142 pGv~e~L~--~~g~~laI~TnK~~-~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~D 218 (263)
+.+...++ ..|+. .+...++. ...+.++++ +|+..---..+| |+..+-++ ++..|++ +.++|....
T Consensus 62 ~~~~~~l~~l~lgi~-~~~g~~~K~~~l~~~~~~-~gi~~~~~~~vG-D~~nDi~~----~~~ag~~----~a~~na~~~ 130 (168)
T 3ewi_A 62 ACSKQTLSALKLDCK-TEVSVSDKLATVDEWRKE-MGLCWKEVAYLG-NEVSDEEC----LKRVGLS----AVPADACSG 130 (168)
T ss_dssp CCCHHHHHTTCCCCC-EECSCSCHHHHHHHHHHH-TTCCGGGEEEEC-CSGGGHHH----HHHSSEE----EECTTCCHH
T ss_pred HHHHHHHHHhCCCcE-EEECCCChHHHHHHHHHH-cCcChHHEEEEe-CCHhHHHH----HHHCCCE----EEeCChhHH
Confidence 55666666 45655 34443433 445667775 888754333445 33344443 4445654 567887544
Q ss_pred H
Q 024758 219 L 219 (263)
Q Consensus 219 i 219 (263)
+
T Consensus 131 ~ 131 (168)
T 3ewi_A 131 A 131 (168)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=93.38 E-value=0.029 Score=46.16 Aligned_cols=15 Identities=33% Similarity=0.479 Sum_probs=13.7
Q ss_pred CcEEEEecCcccccC
Q 024758 2 EDLYALDFDGVICDS 16 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (263)
.|+|+||+||||+|+
T Consensus 19 ik~vifD~DGtL~~~ 33 (191)
T 3n1u_A 19 IKCLICDVDGVLSDG 33 (191)
T ss_dssp CSEEEECSTTTTBCS
T ss_pred CCEEEEeCCCCCCCC
Confidence 379999999999996
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.27 E-value=0.079 Score=49.87 Aligned_cols=79 Identities=10% Similarity=0.103 Sum_probs=59.3
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCce-EEcCCCCCcHHHHHHHHhhC-CCCCCcEEEE
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDR-LYGLGTGPKVNVLKQLQKKP-EHQGLRLHFV 212 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~-~f~~-v~G~~~~pkp~~l~~~l~~l-~~~~~~~l~V 212 (263)
+.+-||+.++|+ .+.+.++|.|+..+..|..+++. ++... +|.. +++.+.-.. ...+=|.++ |.+..++|+|
T Consensus 82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~-LDp~~~~f~~Rl~sRd~cg~--~~~KdL~~ll~rdl~~vvII 158 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGS--LAQKSLRRLFPCDTSMVVVI 158 (442)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-HCTTSTTTTTCEECTTTSSC--SSCCCGGGTCSSCCTTEEEE
T ss_pred EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-hccCCccccceEEEecCCCC--ceeeehHHhcCCCcceEEEE
Confidence 577899999999 89999999999999999999995 88875 6754 775442110 011124433 7888999999
Q ss_pred cCChhhH
Q 024758 213 EDRLATL 219 (263)
Q Consensus 213 GDs~~Di 219 (263)
.|+..-.
T Consensus 159 Dd~p~~~ 165 (442)
T 3ef1_A 159 DDRGDVW 165 (442)
T ss_dssp ESCSGGG
T ss_pred ECCHHHh
Confidence 9998533
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=93.08 E-value=0.051 Score=46.06 Aligned_cols=40 Identities=5% Similarity=-0.090 Sum_probs=32.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCC--CCcEEEEcCC
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD--GWNLYLGNLF 239 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A--gi~~v~v~wG 239 (263)
.|...+..+++.+| ++.|||+.||+.+=+. + |. .|+|.-+
T Consensus 160 ~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~----a~~g~-~vam~Na 201 (239)
T 1u02_A 160 NKGSAIRSVRGERP-----AIIAGDDATDEAAFEA----NDDAL-TIKVGEG 201 (239)
T ss_dssp CHHHHHHHHHTTSC-----EEEEESSHHHHHHHHT----TTTSE-EEEESSS
T ss_pred CHHHHHHHHHhhCC-----eEEEeCCCccHHHHHH----hhCCc-EEEECCC
Confidence 78999999999998 8999999999999875 5 54 4455443
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=92.90 E-value=0.034 Score=44.35 Aligned_cols=47 Identities=11% Similarity=0.017 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhH
Q 024758 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (263)
Q Consensus 164 ~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 219 (263)
...+.++++ +|+..--..++|... .+ ..+.+..|+. ++.|......-
T Consensus 105 ~~~~~~~~~-~~~~~~~~~~vGD~~---~D--i~~a~~aG~~---~i~v~~g~~~~ 151 (179)
T 3l8h_A 105 GMYRDIARR-YDVDLAGVPAVGDSL---RD--LQAAAQAGCA---PWLVQTGNGRK 151 (179)
T ss_dssp HHHHHHHHH-HTCCCTTCEEEESSH---HH--HHHHHHHTCE---EEEESTTTHHH
T ss_pred HHHHHHHHH-cCCCHHHEEEECCCH---HH--HHHHHHCCCc---EEEECCCCcch
Confidence 456677785 888765556667531 11 2234455663 67776554433
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=92.81 E-value=0.014 Score=52.66 Aligned_cols=90 Identities=14% Similarity=0.097 Sum_probs=62.7
Q ss_pred CcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc----eEEcCCC------CCcHHHHHHHHhhC-----
Q 024758 140 LYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD----RLYGLGT------GPKVNVLKQLQKKP----- 202 (263)
Q Consensus 140 lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~----~v~G~~~------~pkp~~l~~~l~~l----- 202 (263)
.-||+.++|+ .+.+.++|.|+.....+..+++. ++....++ .+...+. ...+..+.+-++.+
T Consensus 165 ~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~-Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p 243 (320)
T 3shq_A 165 MRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRL-LGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYK 243 (320)
T ss_dssp BCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHH-TTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCT
T ss_pred eCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccC
Confidence 4599999999 88999999999999999999996 88764432 1222211 01111122233344
Q ss_pred CCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 203 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 203 ~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
|.+.+++|+|.|++.-...... +||.+.
T Consensus 244 ~rdl~~tIiIDdsp~~~~~~p~----NgI~I~ 271 (320)
T 3shq_A 244 QYNSSNTIMFDDIRRNFLMNPK----SGLKIR 271 (320)
T ss_dssp TCCGGGEEEEESCGGGGTTSGG----GEEECC
T ss_pred CCChhHEEEEeCChHHhccCcC----ceEEeC
Confidence 7788999999999998876654 677653
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=91.72 E-value=0.061 Score=44.58 Aligned_cols=16 Identities=31% Similarity=0.179 Sum_probs=13.9
Q ss_pred CcEEEEecCcccccCH
Q 024758 2 EDLYALDFDGVICDSC 17 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (263)
.|+++||+||||+++.
T Consensus 25 ~k~v~~D~DGTL~~~~ 40 (211)
T 2gmw_A 25 VPAIFLDRDGTINVDH 40 (211)
T ss_dssp BCEEEECSBTTTBCCC
T ss_pred CCEEEEcCCCCeECCC
Confidence 4799999999999854
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=91.24 E-value=0.49 Score=42.95 Aligned_cols=83 Identities=19% Similarity=0.156 Sum_probs=54.7
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCc----hHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQ----SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~----~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..++||+.+.|+ ++|+++.++||.+ +..++.+-+. +|+....+.|+.+... ....++ ....++
T Consensus 28 ~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~-lgi~~~~~~i~ts~~~-----~~~~~~----~~~~v~ 97 (352)
T 3kc2_A 28 KKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSK-LDVDVSPLQIIQSHTP-----YKSLVN----KYSRIL 97 (352)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHH-HTSCCCGGGEECTTGG-----GGGGTT----TCSEEE
T ss_pred CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHh-cCCCCChhhEeehHHH-----HHHHHh----cCCEEE
Confidence 368899999998 8999999999976 4445555554 8998777888875421 011111 235677
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEE
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
.||-. .-.+..++ +|++.+.
T Consensus 98 viG~~-~l~~~l~~----~G~~~v~ 117 (352)
T 3kc2_A 98 AVGTP-SVRGVAEG----YGFQDVV 117 (352)
T ss_dssp EESST-THHHHHHH----HTCSEEE
T ss_pred EECCH-HHHHHHHh----CCCeEec
Confidence 77754 33444444 7888775
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=91.15 E-value=0.24 Score=42.33 Aligned_cols=30 Identities=13% Similarity=0.138 Sum_probs=21.6
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHh
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVR 31 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~ 31 (263)
.|+|+|||||||+++-..|......+++++
T Consensus 13 ~kli~~DlDGTLl~~~~~is~~~~~al~~l 42 (262)
T 2fue_A 13 RVLCLFDVDGTLTPARQKIDPEVAAFLQKL 42 (262)
T ss_dssp CEEEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred eEEEEEeCccCCCCCCCcCCHHHHHHHHHH
Confidence 489999999999998654544444555554
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=90.87 E-value=0.074 Score=43.12 Aligned_cols=15 Identities=7% Similarity=-0.035 Sum_probs=13.4
Q ss_pred CcEEEEecCcccccC
Q 024758 2 EDLYALDFDGVICDS 16 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (263)
.|+|+||+||||++.
T Consensus 3 ik~vifD~DgtL~~~ 17 (189)
T 3ib6_A 3 LTHVIWDMGETLNTV 17 (189)
T ss_dssp CCEEEECTBTTTBCC
T ss_pred ceEEEEcCCCceeec
Confidence 489999999999884
|
| >1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 | Back alignment and structure |
|---|
Probab=88.55 E-value=1.1 Score=39.09 Aligned_cols=92 Identities=18% Similarity=0.204 Sum_probs=70.7
Q ss_pred CCcccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE----EcCCCC-CcHHHHHHHHhhCCCCCC
Q 024758 139 RLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL----YGLGTG-PKVNVLKQLQKKPEHQGL 207 (263)
Q Consensus 139 ~lypGv~e~L~------~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v----~G~~~~-pkp~~l~~~l~~l~~~~~ 207 (263)
.++|.+.++++ +.|+++..+++.+...++++.+ .|-.-. .. +|+..+ .+++.+..+.+..+++
T Consensus 116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~--~G~~aV--mPlg~pIGsG~Gi~~~~lI~~I~e~~~vP-- 189 (265)
T 1wv2_A 116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAE--IGCIAV--MPLAGLIGSGLGICNPYNLRIILEEAKVP-- 189 (265)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHH--SCCSEE--EECSSSTTCCCCCSCHHHHHHHHHHCSSC--
T ss_pred ccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--hCCCEE--EeCCccCCCCCCcCCHHHHHHHHhcCCCC--
Confidence 46899999998 6799988778888888888776 666421 22 232223 5899999998877777
Q ss_pred cEEEEc---CChhhHHHhhccCcCCCCcEEEEcCCCCC
Q 024758 208 RLHFVE---DRLATLKNVIKEPELDGWNLYLGNLFRFL 242 (263)
Q Consensus 208 ~~l~VG---Ds~~Di~aA~~~~~~Agi~~v~v~wGy~~ 242 (263)
|+++ -+..|+..|.+ .|++.|.|..+...
T Consensus 190 --VI~eGGI~TPsDAa~Ame----LGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 190 --VLVDAGVGTASDAAIAME----LGCEAVLMNTAIAH 221 (265)
T ss_dssp --BEEESCCCSHHHHHHHHH----HTCSEEEESHHHHT
T ss_pred --EEEeCCCCCHHHHHHHHH----cCCCEEEEChHHhC
Confidence 7777 68889998887 89999999998865
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.35 E-value=0.12 Score=42.92 Aligned_cols=15 Identities=20% Similarity=0.377 Sum_probs=13.7
Q ss_pred cEEEEecCcccccCH
Q 024758 3 DLYALDFDGVICDSC 17 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (263)
++++||||||||+|.
T Consensus 29 ~~LVLDLD~TLvhs~ 43 (195)
T 2hhl_A 29 KCVVIDLDETLVHSS 43 (195)
T ss_dssp CEEEECCBTTTEEEE
T ss_pred eEEEEccccceEccc
Confidence 689999999999984
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=88.28 E-value=0.19 Score=41.50 Aligned_cols=16 Identities=31% Similarity=0.175 Sum_probs=14.2
Q ss_pred CCcEEEEecCcccccC
Q 024758 1 MEDLYALDFDGVICDS 16 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS 16 (263)
|.++++||+||||+++
T Consensus 30 ~~k~i~~D~DGtl~~~ 45 (218)
T 2o2x_A 30 HLPALFLDRDGTINVD 45 (218)
T ss_dssp SCCCEEECSBTTTBCC
T ss_pred cCCEEEEeCCCCcCCC
Confidence 4589999999999987
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=85.57 E-value=0.97 Score=38.22 Aligned_cols=78 Identities=14% Similarity=0.217 Sum_probs=48.1
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH--hhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE--LAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~--~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
.++|++.+.|+ ++|++++++||.+......+.++ .+|+....+.++++. ......+++.. +..++..||
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~-----~~~~~~l~~~~-~~~~v~viG 90 (263)
T 1zjj_A 17 RAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG-----LATRLYMSKHL-DPGKIFVIG 90 (263)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH-----HHHHHHHHHHS-CCCCEEEES
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH-----HHHHHHHHHhC-CCCEEEEEc
Confidence 45699999998 78999999999876444444432 167765556666522 22333343332 335788888
Q ss_pred CChhhHHHhh
Q 024758 214 DRLATLKNVI 223 (263)
Q Consensus 214 Ds~~Di~aA~ 223 (263)
.. ......+
T Consensus 91 ~~-~l~~~l~ 99 (263)
T 1zjj_A 91 GE-GLVKEMQ 99 (263)
T ss_dssp CH-HHHHHHH
T ss_pred CH-HHHHHHH
Confidence 75 4444444
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=84.88 E-value=0.3 Score=39.22 Aligned_cols=16 Identities=19% Similarity=0.264 Sum_probs=14.1
Q ss_pred cEEEEecCcccccCHH
Q 024758 3 DLYALDFDGVICDSCE 18 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (263)
|+++||+||||+++.+
T Consensus 15 k~~~~D~Dgtl~~~~~ 30 (176)
T 2fpr_A 15 KYLFIDRDGTLISEPP 30 (176)
T ss_dssp EEEEECSBTTTBCCC-
T ss_pred cEEEEeCCCCeEcCCC
Confidence 7999999999999865
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=84.71 E-value=0.87 Score=38.27 Aligned_cols=13 Identities=38% Similarity=0.736 Sum_probs=12.4
Q ss_pred cEEEEecCccccc
Q 024758 3 DLYALDFDGVICD 15 (263)
Q Consensus 3 ~~vlFDlDGTLvD 15 (263)
++|+|||||||++
T Consensus 2 kli~~DlDGTLl~ 14 (239)
T 1u02_A 2 SLIFLDYDGTLVP 14 (239)
T ss_dssp CEEEEECBTTTBC
T ss_pred eEEEEecCCCCcC
Confidence 7899999999998
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=84.43 E-value=0.27 Score=40.19 Aligned_cols=15 Identities=13% Similarity=0.226 Sum_probs=13.5
Q ss_pred cEEEEecCcccccCH
Q 024758 3 DLYALDFDGVICDSC 17 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (263)
+++++||||||++|.
T Consensus 16 ~~LVLDLD~TLvhs~ 30 (181)
T 2ght_A 16 ICVVINLDETLVHSS 30 (181)
T ss_dssp CEEEECCBTTTEEEE
T ss_pred eEEEECCCCCeECCc
Confidence 689999999999974
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=83.44 E-value=5.1 Score=34.84 Aligned_cols=80 Identities=13% Similarity=0.146 Sum_probs=58.7
Q ss_pred CCCcEEEEcCCch-HHHHHHHHHhhCCCCCC--ceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCc
Q 024758 151 ASSRIYIVTSNQS-RFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (263)
Q Consensus 151 ~g~~laI~TnK~~-~~a~~iL~~~~gl~~~f--~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 227 (263)
.+.-=++||+..- +..-++| .+|++.+| +-|+++..-.|-..+.++.++.| ++..-+.|||+.---++||+
T Consensus 175 ~~~vNVLVTs~qLVPaLaK~L--LygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eEe~AAk~--- 248 (274)
T 3geb_A 175 PNCVNVLVTTTQLIPALAKVL--LYGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEEEQGAKK--- 248 (274)
T ss_dssp TTEEEEEEESSCHHHHHHHHH--HTTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHHHHHHHH---
T ss_pred CceeEEEEecCchHHHHHHHH--HhhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHHHHHHHH---
Confidence 3444456665544 4444444 37888776 45777654479999999999996 55778899999999999998
Q ss_pred CCCCcEEEEc
Q 024758 228 LDGWNLYLGN 237 (263)
Q Consensus 228 ~Agi~~v~v~ 237 (263)
.+++++=++
T Consensus 249 -~n~PFwrI~ 257 (274)
T 3geb_A 249 -HNMPFWRIS 257 (274)
T ss_dssp -TTCCEEECC
T ss_pred -cCCCeEEee
Confidence 899997764
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=81.33 E-value=0.36 Score=40.60 Aligned_cols=29 Identities=14% Similarity=0.143 Sum_probs=21.7
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHh
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~ 31 (263)
|+|+||+||||+++-..+......+++++
T Consensus 7 kli~~DlDGTLl~~~~~i~~~~~~al~~l 35 (246)
T 2amy_A 7 ALCLFDVDGTLTAPRQKITKEMDDFLQKL 35 (246)
T ss_dssp EEEEEESBTTTBCTTSCCCHHHHHHHHHH
T ss_pred eEEEEECCCCcCCCCcccCHHHHHHHHHH
Confidence 89999999999998655555555555555
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 263 | |||
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 100.0 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 100.0 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 100.0 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.97 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.97 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.97 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.97 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.96 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.96 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.96 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.94 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.93 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.9 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.9 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.9 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.9 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.88 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.84 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.83 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.8 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.8 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.71 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.7 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.67 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.66 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.66 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.65 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.63 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.62 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.59 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.57 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.28 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.95 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.94 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.9 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.53 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.52 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.47 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.46 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.36 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.34 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.25 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.22 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.14 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.13 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.98 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.91 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.57 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.47 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.23 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.8 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 96.4 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 95.66 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 95.2 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.48 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 94.29 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 94.26 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 92.51 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 90.93 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 87.71 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 87.26 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 85.88 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 85.73 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 83.22 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 82.89 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 80.07 |
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=1.2e-34 Score=243.05 Aligned_cols=197 Identities=17% Similarity=0.135 Sum_probs=158.7
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
|+|+||+||||+||.+.+..+++.+++++ |++.. ..+.++.++|.+....+. +.+
T Consensus 5 k~VifD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~-------~~~~~~~~~~~~~~~~~~-~~~----------- 59 (210)
T d2ah5a1 5 TAIFFDLDGTLVDSSIGIHNAFTYTFKEL------GVPSP-------DAKTIRGFMGPPLESSFA-TCL----------- 59 (210)
T ss_dssp CEEEECSBTTTEECHHHHHHHHHHHHHHH------TCCCC-------CHHHHHHTSSSCHHHHHH-TTS-----------
T ss_pred CEEEEeCCCccccCHHHHHHHHHHHHHHC------CCCCC-------CHHHHHHhhhcchhhhcc-ccc-----------
Confidence 89999999999999999999999999999 45432 135788899988755431 111
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEEEcC
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTS 160 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI~Tn 160 (263)
..+ ...+....++..+. .......++|||+.++|+ +.+++++|+||
T Consensus 60 ------~~~----------------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~~~~~i~t~ 107 (210)
T d2ah5a1 60 ------SKD----------------------QISEAVQIYRSYYK----AKGIYEAQLFPQIIDLLEELSSSYPLYITTT 107 (210)
T ss_dssp ------CGG----------------------GHHHHHHHHHHHHH----HTGGGSCEECTTHHHHHHHHHTTSCEEEEEE
T ss_pred ------cch----------------------hhHHHHHHHHHHHH----hhhhhcccchhHHHHHHhhhhcccchhhccc
Confidence 010 01122223333332 234456789999999999 67789999999
Q ss_pred CchHHHHHHHHHhhCCCCCCceEEcCCC--CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcC
Q 024758 161 NQSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 161 K~~~~a~~iL~~~~gl~~~f~~v~G~~~--~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~w 238 (263)
++...++.+|++ +|++.+|+.|++.+. +|||+++..+++++|++|++++|||||.+|+.+|++ +|+++|+|.|
T Consensus 108 ~~~~~~~~~l~~-~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~----aGi~~i~v~~ 182 (210)
T d2ah5a1 108 KDTSTAQDMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARE----TGIQKLAITW 182 (210)
T ss_dssp EEHHHHHHHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEEEEESS
T ss_pred ccchhhhHHHHh-hcccccccccccccccccccccccchhhhhhhcccccceeecCCHHHHHHHHH----cCCeEEEEcC
Confidence 999999999995 999999999998653 499999999999999999999999999999999998 9999999999
Q ss_pred CCCChHHHHhhhhHhHHHhhhccc
Q 024758 239 FRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 239 Gy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|++..+++.+ ++|..+++++++|
T Consensus 183 g~~~~~~l~~-~~pd~vi~~l~el 205 (210)
T d2ah5a1 183 GFGEQADLLN-YQPDYIAHKPLEV 205 (210)
T ss_dssp SSSCHHHHHT-TCCSEEESSTTHH
T ss_pred CCCCHHHHHh-CCCCEEECCHHHH
Confidence 9999998874 6788888888765
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=100.00 E-value=1.1e-33 Score=237.59 Aligned_cols=195 Identities=14% Similarity=0.074 Sum_probs=146.9
Q ss_pred CC-cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccc
Q 024758 1 ME-DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (263)
Q Consensus 1 m~-~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~ 79 (263)
|+ |+|+|||||||+||.+.+..+++.+++++ |++... ++.+..++...+..+ ..+
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~~--------~~~~~~~~~~~~~~~--~~~-------- 56 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATY------GKPFSP--------AQAQKTFPMAAEQAM--TEL-------- 56 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTT------TCCCCH--------HHHHHHTTSCHHHHH--HHT--------
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHc------CCCCCH--------HHHHHHhcchhhhhh--hcc--------
Confidence 77 99999999999999999999999999998 444221 233444444433222 111
Q ss_pred cccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEE
Q 024758 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYI 157 (263)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI 157 (263)
+ .+....++....+++.+ .. +...+++|||+.++|+ +++++++|
T Consensus 57 -------~----------------------~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~g~~~~L~~l~~~~~~~i 102 (207)
T d2hdoa1 57 -------G----------------------IAASEFDHFQAQYEDVM----AS-HYDQIELYPGITSLFEQLPSELRLGI 102 (207)
T ss_dssp -------T----------------------CCGGGHHHHHHHHHHHH----TT-CGGGCEECTTHHHHHHHSCTTSEEEE
T ss_pred -------c----------------------cchhhHHHHHHHhhhhh----cc-cccccccccchhhhhhhhcccccccc
Confidence 1 00111111222233332 22 2345789999999999 77899999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||++...++.+|++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+|||||.+|+++|++ +|+++
T Consensus 103 vT~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~----aG~~~ 177 (207)
T d2hdoa1 103 VTSQRRNELESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQA----ANVDF 177 (207)
T ss_dssp ECSSCHHHHHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred ccccccccccccccc-ccccccccccccccccccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHH----cCCeE
Confidence 999999999999995 99999999999864 3499999999999999999999999999999999998 99999
Q ss_pred EEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 234 YLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 234 v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
|+|.||+.+..++.++-+ ++.++.+
T Consensus 178 i~v~~g~~~~~~~~~~~~---~i~~l~d 202 (207)
T d2hdoa1 178 GLAVWGMDPNADHQKVAH---RFQKPLD 202 (207)
T ss_dssp EEEGGGCCTTGGGSCCSE---EESSGGG
T ss_pred EEEecCCCChhHhhhcCc---EeCCHHH
Confidence 999999999988765433 3445443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=100.00 E-value=5.7e-33 Score=233.59 Aligned_cols=208 Identities=17% Similarity=0.123 Sum_probs=157.0
Q ss_pred cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccccc
Q 024758 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~~ 82 (263)
|+|+|||||||+||.+.+..+++.+++++ |++... .+.++.+.+........ +.+..
T Consensus 5 k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~--------- 61 (224)
T d2hsza1 5 KLIGFDLDGTLVNSLPDLALSINSALKDV------NLPQAS-------ENLVMTWIGNGADVLSQ-RAVDW--------- 61 (224)
T ss_dssp SEEEECSBTTTEECHHHHHHHHHHHHHHT------TCCCCC-------HHHHHHHCSSCHHHHHH-HHHHH---------
T ss_pred CEEEEeCCCCcccCHHHHHHHHHHHHHHC------CCCCCc-------HHHHHHHhhhhhhhhhh-hhhhh---------
Confidence 89999999999999999999999999999 444332 34677777777654331 22110
Q ss_pred ccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEEc
Q 024758 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~T 159 (263)
....+ ...+..+... ..+......+........++|||+.++|. ++|++++|+|
T Consensus 62 ----------~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~t 118 (224)
T d2hsza1 62 ----------ACKQA---------EKELTEDEFK----YFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVT 118 (224)
T ss_dssp ----------HHHHH---------TCCCCHHHHH----HHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEEC
T ss_pred ----------hhhhh---------hhhhhHHHHH----HHHHHHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccc
Confidence 00000 0011111111 11122222222334556789999999999 7999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEE
Q 024758 160 SNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (263)
Q Consensus 160 nK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~ 235 (263)
|.++..++.+|++ +||..+|+.+++++ .+|+|+++..++++++.++++++||||+..|+++|++ +|+++|+
T Consensus 119 n~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~----aG~~~i~ 193 (224)
T d2hsza1 119 NKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHS----AGCAVVG 193 (224)
T ss_dssp SSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----HTCEEEE
T ss_pred cccHHHHHHHHHh-cCchhhccccccccccccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHH----cCCeEEE
Confidence 9999999999996 99999999999875 2499999999999999999999999999999999998 9999999
Q ss_pred EcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 236 GNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 236 v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|+|||++..++.+ ..|..+++++++|
T Consensus 194 v~~g~~~~~~l~~-~~~d~~v~~l~dL 219 (224)
T d2hsza1 194 LTYGYNYNIPIAQ-SKPDWIFDDFADI 219 (224)
T ss_dssp ESSSCSTTCCGGG-GCCSEEESSGGGG
T ss_pred EeCCCCCcchhhh-cCCCEEECCHHHH
Confidence 9999998887763 5777777777765
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=4.2e-31 Score=222.46 Aligned_cols=203 Identities=15% Similarity=0.090 Sum_probs=150.5
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
.+++||||||||+||.+....+.+.+++++ |++.. ..++++.+.|.+....+. .......+.
T Consensus 3 i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~------g~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~---- 64 (218)
T d1te2a_ 3 ILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDIS-------RRNELPDTLGLRIDMVVD-LWYARQPWN---- 64 (218)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHT------TCCGG-------GGGGSCCCTTCCHHHHHH-HHHHHSCCS----
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHc------CCCCC-------HHHHHHHHhCCCccchhh-hhhhccccc----
Confidence 379999999999999998888999999999 44321 124677888877655432 111110000
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEEE
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI~ 158 (263)
.... .+..+...+.+.+.+ .....+|||+.++|+ ++|++++|+
T Consensus 65 -----~~~~-------------------------~~~~~~~~~~~~~~~----~~~~~~~pg~~~~l~~L~~~g~~~~i~ 110 (218)
T d1te2a_ 65 -----GPSR-------------------------QEVVERVIARAISLV----EETRPLLPGVREAVALCKEQGLLVGLA 110 (218)
T ss_dssp -----SSCH-------------------------HHHHHHHHHHHHHHH----HHHCCBCTTHHHHHHHHHHTTCEEEEE
T ss_pred -----chhH-------------------------HHHHHHHHHHHHHhh----hccccccchHHHHHHHhhhcccccccc
Confidence 0000 011112222222211 123568999999999 899999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
||+++..++.++++ +|+..+|+.|++++ .||+|+++..+++++|++|++++||||+..|+.+|++ +|+++|
T Consensus 111 T~~~~~~~~~~l~~-~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~----~G~~~i 185 (218)
T d1te2a_ 111 SASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKA----ARMRSI 185 (218)
T ss_dssp ESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHH----TTCEEE
T ss_pred cccccccccccccc-ccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHH----cCCEEE
Confidence 99999999999995 99999999999975 2489999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChHHHHhhhhHhHHHhhhcccC
Q 024758 235 LGNLFRFLCHILLLYLYAVALFAKMDVLN 263 (263)
Q Consensus 235 ~v~wGy~~~~~l~~~~~~~~~~~~~~~~~ 263 (263)
+|.+++...+.. ...|..+..++.+|+
T Consensus 186 ~v~~~~~~~~~~--~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 186 VVPAPEAQNDPR--FVLANVKLSSLTELT 212 (218)
T ss_dssp ECCCTTTTTCGG--GGGSSEECSCGGGCC
T ss_pred EECCCCCccchh--hcCCCEEECChhhCC
Confidence 999998765543 345566677776653
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=4.2e-31 Score=220.88 Aligned_cols=180 Identities=17% Similarity=0.182 Sum_probs=134.6
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhcccccc-ccchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVV-ETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~i-g~G~~~~i~~~~l~~~~~~~~~ 80 (263)
+++++|||||||+||.+.+..+++.+++++ |++.. .++++.++ +.+...++ .+.. .
T Consensus 1 ~~a~iFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~~~~~~~~~~-~~~~-~------- 57 (204)
T d2go7a1 1 KTAFIWDLDGTLLDSYEAILSGIEETFAQF------SIPYD--------KEKVREFIFKYSVQDLL-VRVA-E------- 57 (204)
T ss_dssp CCEEEECTBTTTEECHHHHHHHHHHHHHHH------TCCCC--------HHHHHHHHHHSCHHHHH-HHHH-H-------
T ss_pred CEEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHhhccccccccc-cccc-c-------
Confidence 368999999999999999999999999999 55422 12333333 44433322 1111 1
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
..+...+ .+..+...+. ..+.....+||||.++|+ ++|++++|
T Consensus 58 --------------------------~~~~~~~----~~~~~~~~~~----~~~~~~~~~~pgv~~~L~~L~~~g~~~~v 103 (204)
T d2go7a1 58 --------------------------DRNLDVE----VLNQVRAQSL----AEKNAQVVLMPGAREVLAWADESGIQQFI 103 (204)
T ss_dssp --------------------------HHTCCHH----HHHHHHHHHH----TTCGGGCEECTTHHHHHHHHHHTTCEEEE
T ss_pred --------------------------hhhhhHH----HHHHHHHHHH----HhhcccCcccchHHhhhhcccccccchhh
Confidence 1112222 1222222322 233455789999999999 88999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||+++. +..+|++ +|+..||+.|+|++ .+|+|+++..+++++|++|++|+||||+.+|+++|++ +|+++
T Consensus 104 ~Sn~~~~-~~~~l~~-~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~----~G~~~ 177 (204)
T d2go7a1 104 YTHKGNN-AFTILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQN----SGIQS 177 (204)
T ss_dssp ECSSCTH-HHHHHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred hcccchh-hhhhhhh-cccccccccccccccccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHH----cCCeE
Confidence 9999875 5678995 99999999999875 3499999999999999999999999999999999998 99999
Q ss_pred EEEcCCCCChH
Q 024758 234 YLGNLFRFLCH 244 (263)
Q Consensus 234 v~v~wGy~~~~ 244 (263)
|+|.||....+
T Consensus 178 i~v~~~~~~~~ 188 (204)
T d2go7a1 178 INFLESTYEGN 188 (204)
T ss_dssp EESSCCSCTTE
T ss_pred EEEcCCCCCcC
Confidence 99999965443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.97 E-value=1.4e-30 Score=221.19 Aligned_cols=205 Identities=11% Similarity=-0.016 Sum_probs=143.6
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHh-CCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVR-WPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~-~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+||+||||+||-+....+.+.++.++ +.... . .-..+.+.-....+ ...+ .
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~-~~~~-~------- 57 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS----T-----------GSHDFSGKMDGAII-YEVL-S------- 57 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC----C--------------CCTTCCHHHHH-HHHH-H-------
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCcc----H-----------HHHHHhcCchHHHH-HHHH-H-------
Confidence 479999999999999999999999888887 32211 0 00111221111111 1111 1
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccc-cCCCCcccHHHHHH---hCC-CcE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWI-GANRLYPGVSDALK---LAS-SRI 155 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~-~~~~lypGv~e~L~---~~g-~~l 155 (263)
..++......+.+..+++.|...+.+... ...++|||+.++|+ ++| +++
T Consensus 58 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~ 111 (228)
T d2hcfa1 58 --------------------------NVGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLL 111 (228)
T ss_dssp --------------------------TTTCCHHHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEE
T ss_pred --------------------------HhCCChHHHHHHHHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccc
Confidence 11122222222333333333333333222 23479999999999 566 899
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC----CCcHHHHHHHHhhC---CCCCCcEEEEcCChhhHHHhhccCcC
Q 024758 156 YIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPEL 228 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----~pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~ 228 (263)
+|+||+++..+..+|++ +||..||+.+++++. +|+|+++...+..+ +++|++|+||||+.+|+.+|++
T Consensus 112 ~v~t~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~---- 186 (228)
T d2hcfa1 112 GLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARE---- 186 (228)
T ss_dssp EEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHT----
T ss_pred cccCCCcchhhhhhhhh-hcccccccccccccccccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHH----
Confidence 99999999999999995 999999999998762 27788766655555 7899999999999999999997
Q ss_pred CCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 229 DGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 229 Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
+|+++|+|.||+++.++|.+ .+|..++.++++|
T Consensus 187 aG~~~i~v~~g~~~~~~l~~-~~ad~vi~~~~el 219 (228)
T d2hcfa1 187 LDARSIAVATGNFTMEELAR-HKPGTLFKNFAET 219 (228)
T ss_dssp TTCEEEEECCSSSCHHHHHT-TCCSEEESCSCCH
T ss_pred cCCEEEEEcCCCCCHHHHhh-CCCCEEECCHHHH
Confidence 99999999999999998874 4788788877765
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.97 E-value=3e-31 Score=229.34 Aligned_cols=192 Identities=14% Similarity=0.039 Sum_probs=138.3
Q ss_pred CcEEEEecCcccccCHHH-HHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 2 EDLYALDFDGVICDSCEE-TALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~d-i~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
.|+|+|||||||+|+-.. ...+.+.+++++ |++. +.++++.++|..-...+ +.+...
T Consensus 2 IkaviFD~dGTL~d~~~~~~~~~~~~~~~~~------g~~~--------~~~~~~~~~g~~~~~~~--~~~~~~------ 59 (257)
T d1swva_ 2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKR------GVAI--------TAEEARKPMGLLKIDHV--RALTEM------ 59 (257)
T ss_dssp CCEEEECSBTTTBSTTCCTTHHHHHHHHHTT------TCCC--------CHHHHHTTTTSCHHHHH--HHHHHS------
T ss_pred cEEEEEcCCCCeEeCcchHHHHHHHHHHHHc------CCCC--------CHHHHHHHhCCcHHHHH--HHHhhh------
Confidence 389999999999998653 356777888888 4432 13567777765433322 222110
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhc--CCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (263)
......| .+.++ ..+.........+.+.|.+. +.....+|||+.++|+ ++|+++
T Consensus 60 ----------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~L~~Lk~~g~~i 118 (257)
T d1swva_ 60 ----------PRIASEW-------NRVFRQLPTEADIQEMYEEFEEILFAI----LPRYASPINGVKEVIASLRERGIKI 118 (257)
T ss_dssp ----------HHHHHHH-------HHHHSSCCCHHHHHHHHHHHHHHHHHH----GGGGCCBCTTHHHHHHHHHHTTCEE
T ss_pred ----------hhhhHHH-------HHHhcccCCHHHHHHHHHHHHHHHHHH----hhccCccCCcHHHHHHHHHhcccce
Confidence 0000111 11111 13344444444455554443 3345689999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCCC-ceEEcCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhhHHHhhccCcCC
Q 024758 156 YIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELD 229 (263)
Q Consensus 156 aI~TnK~~~~a~~iL~~~~gl~~~f-~~v~G~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~~~~A 229 (263)
+|+||.++..++.+|++ +|+..+| |.+++++ .||+|+++..+++++|+. +++|+|||||.+||++|++ |
T Consensus 119 ~i~Tn~~~~~~~~~l~~-~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~----a 193 (257)
T d1swva_ 119 GSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRN----A 193 (257)
T ss_dssp EEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHH----T
T ss_pred eecCCCchhhHHHHHHH-HhhcccccccccccccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHH----C
Confidence 99999999999999995 9999876 8887764 249999999999999995 5899999999999999998 9
Q ss_pred CCcEEEEcCCCC
Q 024758 230 GWNLYLGNLFRF 241 (263)
Q Consensus 230 gi~~v~v~wGy~ 241 (263)
|+.+|+|+||++
T Consensus 194 G~~ti~v~~G~~ 205 (257)
T d1swva_ 194 GMWTVGVILGSS 205 (257)
T ss_dssp TSEEEEECTTCT
T ss_pred CCEEEEEccCCC
Confidence 999999999986
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=1.1e-29 Score=210.69 Aligned_cols=175 Identities=15% Similarity=0.194 Sum_probs=130.6
Q ss_pred CC-cEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccc
Q 024758 1 ME-DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (263)
Q Consensus 1 m~-~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~ 79 (263)
|. |+|+|||||||+||.+.+..+++.+++++ |++.. .+.++..+|.+....+ ..+
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~~~~~~~~~--~~~-------- 56 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALY------GITQD--------HDSVYQALKVSTPFAI--ETF-------- 56 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHHHHHHHHHCHHHHH--HHH--------
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHc------CCCcc--------HHHHHhhhhccchhhh--hhh--------
Confidence 66 99999999999999999999999999988 44421 2345555555433321 111
Q ss_pred cccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEE
Q 024758 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (263)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~la 156 (263)
.+..+ ...+.+++.+. .. .....+||||.++|+ ++|++++
T Consensus 57 ------------------~~~~~--------------~~~~~~~~~~~----~~-~~~~~~~~gv~~~l~~l~~~g~~~~ 99 (187)
T d2fi1a1 57 ------------------APNLE--------------NFLEKYKENEA----RE-LEHPILFEGVSDLLEDISNQGGRHF 99 (187)
T ss_dssp ------------------CTTCT--------------THHHHHHHHHH----HH-TTSCCBCTTHHHHHHHHHHTTCEEE
T ss_pred ------------------hHHHH--------------HHHHHHHHHHH----HH-hhcCcccchhHHHHHHHHhhhcccc
Confidence 00000 11122233322 22 335789999999998 8999999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc
Q 024758 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (263)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~ 232 (263)
|+||+++... .+|++ +|+..+|+.|+|++ .||+|+++..+++++++ ++|+|||||..|+++|++ +|++
T Consensus 100 i~Sn~~~~~~-~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~----aG~~ 171 (187)
T d2fi1a1 100 LVSHRNDQVL-EILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQA----AGLD 171 (187)
T ss_dssp EECSSCTHHH-HHHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHH----TTCE
T ss_pred ccccCccchh-hhhhh-hccccccccccccccccccCCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHH----cCCE
Confidence 9999988766 47885 99999999999875 35889999999999986 459999999999999998 9999
Q ss_pred EEEEcCCCCChH
Q 024758 233 LYLGNLFRFLCH 244 (263)
Q Consensus 233 ~v~v~wGy~~~~ 244 (263)
+++|++|++.++
T Consensus 172 ~i~v~~~~~~~~ 183 (187)
T d2fi1a1 172 THLFTSIVNLRQ 183 (187)
T ss_dssp EEECSCHHHHHH
T ss_pred EEEECCCCChHh
Confidence 999998876554
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.96 E-value=3.4e-29 Score=211.26 Aligned_cols=202 Identities=17% Similarity=0.085 Sum_probs=146.3
Q ss_pred CcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhcccccccc
Q 024758 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~~ 81 (263)
+|+|||||||||+||.+....+++.+++++ |++.. . .+....+.|..+..++. +.+...
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~------g~~~~-~------~~~~~~~~g~~~~~~~~-~~~~~~------- 60 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEA------GYPIS-V------EEMGERFAGMTWKNILL-QVESEA------- 60 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCC-H------HHHHHHHTTCCHHHHHH-HHHHHH-------
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHc------CCCCC-H------HHHHHHHhhhccccccc-cccccc-------
Confidence 689999999999999999999999999999 44421 1 12234455555554431 222110
Q ss_pred cccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHHhCCCcEEEEcCC
Q 024758 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSN 161 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~~~g~~laI~TnK 161 (263)
+... +. +..+.+...|.+.. .....++||+.++|++.+.+.+|+||.
T Consensus 61 -----~~~~--------------------~~----~~~~~~~~~~~~~~----~~~~~~~~g~~~~L~~l~~~~~i~t~~ 107 (222)
T d2fdra1 61 -----SIPL--------------------SA----SLLDKSEKLLDMRL----ERDVKIIDGVKFALSRLTTPRCICSNS 107 (222)
T ss_dssp -----CCCC--------------------CT----HHHHHHHHHHHHHH----HHHCCBCTTHHHHHHHCCSCEEEEESS
T ss_pred -----cccc--------------------cc----cchhHHHHHHHHHh----hhccchhhhHHHHhhhccccceeeeec
Confidence 0000 11 11222233332222 234689999999999667788999999
Q ss_pred chHHHHHHHHHhhCCCCCCceEEc-CC------CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEE
Q 024758 162 QSRFVETLLRELAGVTITPDRLYG-LG------TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G-~~------~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v 234 (263)
.+..++.+|++ +|+..+|+.++. .+ .||+|++++.+++++|++|++|+||||+..|+++|++ +|+++|
T Consensus 108 ~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~----aG~~~i 182 (222)
T d2fdra1 108 SSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARA----AGMRVI 182 (222)
T ss_dssp CHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----TTCEEE
T ss_pred chhhhhhhhcc-cccccccceeecccccccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHH----cCCEEE
Confidence 99999999995 999999986543 22 3589999999999999999999999999999999998 999999
Q ss_pred EEcCCCCChH---HHHhhhhHhHHHhhhccc
Q 024758 235 LGNLFRFLCH---ILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 235 ~v~wGy~~~~---~l~~~~~~~~~~~~~~~~ 262 (263)
+|+||+.... +-+...+|..+++++.+|
T Consensus 183 ~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL 213 (222)
T d2fdra1 183 GFTGASHTYPSHADRLTDAGAETVISRMQDL 213 (222)
T ss_dssp EECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred EEccCCCCCcchHHHHHhCCCCEEECCHHHH
Confidence 9999987542 333355677777777664
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.96 E-value=2.3e-28 Score=205.93 Aligned_cols=185 Identities=17% Similarity=0.153 Sum_probs=137.8
Q ss_pred CCcEEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCcchhhhhhhhhhccccccccchHHHHHHHHHhhccccccc
Q 024758 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (263)
Q Consensus 1 m~~~vlFDlDGTLvDS~~di~~s~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~r~~ig~G~~~~i~~~~l~~~~~~~~~ 80 (263)
|.|+|+||+||||+||.+.+..+.+.+++++ |++... .+..+.+.|.+....+ +.+.+..
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~~----- 60 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEI------GINGVD-------RQFNEQLKGVSREDSL--QKILDLA----- 60 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHT------TCCCCC-------HHHHTTTTTCCHHHHH--HHHHTTS-----
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHc------CCCCCh-------HHHHHHHhhccchhhh--hhccccc-----
Confidence 8999999999999999999999999999998 444221 1234445565554432 2221100
Q ss_pred ccccccCcchHHHHHhhhhhhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH---hCCCcEEE
Q 024758 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~---~~g~~laI 157 (263)
. ..++++.+.+....+.+.|...... ....++|||+.++|+ ++|++++|
T Consensus 61 ------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~l~~~~~~i~i 112 (221)
T d1o08a_ 61 ------D--------------------KKVSAEEFKELAKRKNDNYVKMIQD--VSPADVYPGILQLLKDLRSNKIKIAL 112 (221)
T ss_dssp ------S--------------------SCCCHHHHHHHHHHHHHHHHHHTTT--CCGGGBCTTHHHHHHHHHHTTCEEEE
T ss_pred ------c--------------------ccchhhhhhhHHHHHHhhccccccc--cccccccCCceeccccccccccceEE
Confidence 0 0123333344444444555443221 234579999999999 89999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcE
Q 024758 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~ 233 (263)
+||... ....++. +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+..|+++|++ +|+++
T Consensus 113 ~s~~~~--~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~----aG~~~ 185 (221)
T d1o08a_ 113 ASASKN--GPFLLER-MNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD----SGALP 185 (221)
T ss_dssp CCSCTT--HHHHHHH-TTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred Eeecch--hhHHHHh-hccccccccccccccccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHH----cCCEE
Confidence 999754 5788995 99999999999865 2499999999999999999999999999999999998 99999
Q ss_pred EEEcCCC
Q 024758 234 YLGNLFR 240 (263)
Q Consensus 234 v~v~wGy 240 (263)
|+|.||+
T Consensus 186 i~v~~~~ 192 (221)
T d1o08a_ 186 IGVGRPE 192 (221)
T ss_dssp EEESCHH
T ss_pred EEECChh
Confidence 9999875
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.94 E-value=6.7e-27 Score=198.81 Aligned_cols=117 Identities=15% Similarity=0.142 Sum_probs=100.8
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
..||||+.++|+ ++|++++|+||.+....+.+|++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+|
T Consensus 99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~ 177 (230)
T d1x42a1 99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY 177 (230)
T ss_dssp CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CcccccHHHHHHHhhccCceeeeeccccccchhhhcc-cccccccccccccccccccchhhHHHHHHHhhhcccccccce
Confidence 579999999999 77899999999999999999995 99999999999874 459999999999999999999999
Q ss_pred EcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 212 VEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 212 VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
|||+. +|+++|++ +|+++|++.++....+... .+..++.++++|
T Consensus 178 vgD~~~~Di~~A~~----~G~~~v~v~~~~~~~~~~~---~~d~~i~~l~el 222 (230)
T d1x42a1 178 VGDNPVKDCGGSKN----LGMTSILLDRKGEKREFWD---KCDFIVSDLREV 222 (230)
T ss_dssp EESCTTTTHHHHHT----TTCEEEEECTTSCCGGGGG---GSSEEESSTTHH
T ss_pred eecCcHhHHHHHHH----cCCEEEEECCCCCCccccc---CCCEEECCHHHH
Confidence 99985 79999997 9999999999977655332 334455555543
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=7.5e-27 Score=190.87 Aligned_cols=110 Identities=16% Similarity=0.056 Sum_probs=97.0
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCch-HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQS-RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 212 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~-~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~V 212 (263)
..++||||.++|+ ++|++++|+||+++ ..++.+++. +++..+|+.+.+. .+|+|+++..+++++|++|++++||
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~-~~~~~~~~~~~~~-~kp~~~~~~~~~~~~~~~~~~~l~i 121 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLEL-FDLGKYFIQREIY-PGSKVTHFERLHHKTGVPFSQMVFF 121 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHH-TTCGGGCSEEEES-SSCHHHHHHHHHHHHCCCGGGEEEE
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhc-ccccccceeeecc-cCCChHHHHHHHHHhCCChHHEEEE
Confidence 4589999999999 89999999998776 557778885 9999999988764 3699999999999999999999999
Q ss_pred cCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHh
Q 024758 213 EDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAV 253 (263)
Q Consensus 213 GDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~ 253 (263)
||+..|+++|++ +||++|+|.||| +.+++.+.+...
T Consensus 122 gD~~~di~aA~~----aG~~~i~v~~G~-~~~~~~~~l~~f 157 (164)
T d1u7pa_ 122 DDENRNIIDVGR----LGVTCIHIRDGM-SLQTLTQGLETF 157 (164)
T ss_dssp ESCHHHHHHHHT----TTCEEEECSSCC-CHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH----cCCEEEEECCCC-ChHHHHHHHHHH
Confidence 999999999998 999999999998 677777766543
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.90 E-value=7.3e-25 Score=183.56 Aligned_cols=117 Identities=12% Similarity=0.082 Sum_probs=100.5
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~ 209 (263)
...+||++.++|+ ++|++++|+||+.....+.++++ +++..+||.+++++ .||+|+.+..+++++|++|++|
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~-~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~ 169 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 169 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhh-ccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceE
Confidence 4679999999999 89999999999999999999995 99999999999875 3599999999999999999999
Q ss_pred EEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhc
Q 024758 210 HFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMD 260 (263)
Q Consensus 210 l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~ 260 (263)
+||||+..|+++|++ +|+++|+|.++....+++.. .|..+..++.
T Consensus 170 l~VgD~~~Di~~A~~----aG~~~v~v~r~~~~~~~~~~--~~d~~i~~l~ 214 (220)
T d1zrna_ 170 LFVASNAWDATGARY----FGFPTCWINRTGNVFEEMGQ--TPDWEVTSLR 214 (220)
T ss_dssp EEEESCHHHHHHHHH----HTCCEEEECTTCCCCCSSSC--CCSEEESSHH
T ss_pred EEEecChHhHHHHHH----cCCEEEEEcCCCCCcccccC--CCCEEECCHH
Confidence 999999999999998 99999999877666555422 2444444443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=2.1e-23 Score=178.00 Aligned_cols=100 Identities=13% Similarity=0.030 Sum_probs=89.3
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
...+|||+.++|+ ++|++++|+||.+....+..+++ +|+..||+.+++++ .||+|+++..+++++|++|++++
T Consensus 107 ~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l 185 (247)
T d2gfha1 107 HMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 185 (247)
T ss_dssp TCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cCccCccHHHHHHHhhcccceEEeecccchhhhhhhhh-ccccccccccccccccccchhhhhhHHHHHHHhhcCHHhcc
Confidence 4579999999999 78999999999999999999996 99999999999864 35999999999999999999999
Q ss_pred EEcCCh-hhHHHhhccCcCCCCcEEEEcCCCC
Q 024758 211 FVEDRL-ATLKNVIKEPELDGWNLYLGNLFRF 241 (263)
Q Consensus 211 ~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~ 241 (263)
||||+. +|+.+|++ +|++++++.-+.+
T Consensus 186 ~iGD~~~~Di~~A~~----~G~~~~~~~~~~~ 213 (247)
T d2gfha1 186 MVGDTLETDIQGGLN----AGLKATVWINKSG 213 (247)
T ss_dssp EEESCTTTHHHHHHH----TTCSEEEEECTTC
T ss_pred eeccChHhHHHHHHH----cCCeEEEEECCCC
Confidence 999996 79999998 9999776654433
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1e-23 Score=177.63 Aligned_cols=122 Identities=10% Similarity=0.013 Sum_probs=97.3
Q ss_pred ccCCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEc-CC----CCCcHHHHHHHHhhCCCCC
Q 024758 135 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-LG----TGPKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G-~~----~~pkp~~l~~~l~~l~~~~ 206 (263)
.....+|||+.++|+ ++|++++|+||.+....+.+++. .|+..+|+.... .+ .||+|++++.+++++|++|
T Consensus 123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p 201 (253)
T d1zs9a1 123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCST 201 (253)
T ss_dssp SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCG
T ss_pred hcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHH-cCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCc
Confidence 334689999999999 79999999999999999999995 999888775432 22 3699999999999999999
Q ss_pred CcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhhHhHHHhhhccc
Q 024758 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLYAVALFAKMDVL 262 (263)
Q Consensus 207 ~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~~~~~~~~~~~~ 262 (263)
++|+||||+.+|+.+|++ ||+++|+|.++.+...... .-.+..+..+.++|
T Consensus 202 ~~~l~vgD~~~dv~aA~~----aG~~ti~v~r~g~~~~~~~-~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 202 NNILFLTDVTREASAAEE----ADVHVAVVVRPGNAGLTDD-EKTYYSLITSFSEL 252 (253)
T ss_dssp GGEEEEESCHHHHHHHHH----TTCEEEEECCTTCCCCCHH-HHHHSCEESSGGGC
T ss_pred CcEEEEeCCHHHHHHHHH----cCCEEEEEeCCCCCCCchh-hcCCCcEECChHHh
Confidence 999999999999999998 9999999998644322221 22223345555554
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.90 E-value=4.5e-24 Score=181.23 Aligned_cols=98 Identities=15% Similarity=0.192 Sum_probs=90.9
Q ss_pred CCCCcccHHHHHH-hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEE
Q 024758 137 ANRLYPGVSDALK-LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (263)
Q Consensus 137 ~~~lypGv~e~L~-~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~ 211 (263)
...+|||+.++|+ -++++++|+||.+...+..++++ +|+..+||.|++++ .||+|+++..+++++|++|++|+|
T Consensus 91 ~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~-~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~ 169 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (245)
T ss_dssp SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred ccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhh-cccccccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence 4589999999999 68999999999999999999995 99999999999875 359999999999999999999999
Q ss_pred EcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 212 VEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 212 VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
|||+.+||.+|++ +|+++|+|..+
T Consensus 170 VgD~~~di~~A~~----aG~~tv~v~r~ 193 (245)
T d1qq5a_ 170 VSSNGFDVGGAKN----FGFSVARVARL 193 (245)
T ss_dssp EESCHHHHHHHHH----HTCEEEEECCS
T ss_pred EeCCHHHHHHHHH----cCCeEEEEcCC
Confidence 9999999999998 99999999754
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=1.4e-25 Score=187.99 Aligned_cols=112 Identities=14% Similarity=-0.010 Sum_probs=98.2
Q ss_pred ccCCCCcccHHHHHH---hCCCcEEEEcC----CchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCC
Q 024758 135 IGANRLYPGVSDALK---LASSRIYIVTS----NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPE 203 (263)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~laI~Tn----K~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~ 203 (263)
....++|||+.++|. ++|++++|+|| ......+..+.+ +|+..|||.+++++ .||+|++++.++++++
T Consensus 93 ~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~-~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~ 171 (222)
T d1cr6a1 93 MAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMM-CELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK 171 (222)
T ss_dssp HHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHH-HHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred HhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHh-cChHhhhceeeehhhccCCCCChHHHHHHHHHhC
Confidence 345689999999999 89999999997 455566777774 89999999999874 3599999999999999
Q ss_pred CCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhh
Q 024758 204 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLY 251 (263)
Q Consensus 204 ~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~ 251 (263)
++|++|+||||+..|+++|++ +|+++|+|.+|....++|.+.++
T Consensus 172 v~p~~~l~IgD~~~Di~~A~~----aG~~ti~V~~~~~~~~el~~~~~ 215 (222)
T d1cr6a1 172 AKPNEVVFLDDFGSNLKPARD----MGMVTILVHNTASALRELEKVTG 215 (222)
T ss_dssp SCTTSEEEEESSSTTTHHHHH----HTCEEEECCSSSHHHHHHHHHHS
T ss_pred CCcceEEEEECCHHHHHHHHH----cCCEEEEECCcchHHHHHHHhhC
Confidence 999999999999999999998 99999999999888888776544
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=8.7e-24 Score=175.44 Aligned_cols=107 Identities=16% Similarity=-0.015 Sum_probs=91.3
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchH----HHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCC
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSR----FVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ 205 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~----~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~ 205 (263)
...++||+.++|+ ++|++++|+||.... ..+..... .++..+||.|++++ .||+|+++..+++.+|++
T Consensus 97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~-~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~ 175 (225)
T d1zd3a1 97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-CELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS 175 (225)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-HHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhh-cChHhhccEEEeccccccchhHHHHHHHHhhhcccC
Confidence 3578999999999 899999999986544 34444443 67889999999864 469999999999999999
Q ss_pred CCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 206 ~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
|++++||||+..|+++|++ +|+++|+|.+|....++|.+
T Consensus 176 p~e~l~VgD~~~Di~~A~~----~G~~ti~v~~~~~~~~~l~~ 214 (225)
T d1zd3a1 176 PSEVVFLDDIGANLKPARD----LGMVTILVQDTDTALKELEK 214 (225)
T ss_dssp GGGEEEEESCHHHHHHHHH----TTCEEEECSSHHHHHHHHHH
T ss_pred ccceeEEecCHHHHHHHHH----cCCEEEEECCcchhHHHHHH
Confidence 9999999999999999998 99999999998776676653
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=8.1e-23 Score=165.51 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=87.0
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l 210 (263)
..++||+.+++. .+|++++|+||.+...+...+.++.|+..+|+.+++++ .+|+|+++..+++++|++|++|+
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l 162 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 162 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEE
Confidence 478999999988 89999999999988887777775248889999999864 45999999999999999999999
Q ss_pred EEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 211 FVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 211 ~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
|||||.+|+++|++ +|+++|+|+-.
T Consensus 163 ~vgDs~~di~~A~~----aG~~ti~v~~~ 187 (197)
T d2b0ca1 163 FFDDNADNIEGANQ----LGITSILVKDK 187 (197)
T ss_dssp EEESCHHHHHHHHT----TTCEEEECCST
T ss_pred EEeCCHHHHHHHHH----cCCEEEEECCC
Confidence 99999999999998 99999998643
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=1.1e-20 Score=157.27 Aligned_cols=98 Identities=13% Similarity=0.173 Sum_probs=84.1
Q ss_pred cCCCCcccHHHHHHhCCCcEEEEcCCchHHHHHHH-----------HHhhCCCCCCceEEcCC---CCCcHHHHHHHHhh
Q 024758 136 GANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL-----------RELAGVTITPDRLYGLG---TGPKVNVLKQLQKK 201 (263)
Q Consensus 136 ~~~~lypGv~e~L~~~g~~laI~TnK~~~~a~~iL-----------~~~~gl~~~f~~v~G~~---~~pkp~~l~~~l~~ 201 (263)
....+++++.+++. .+.++++.|++.......+. +. +||..||+.|++++ .||+|+++..++++
T Consensus 94 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~~ 171 (225)
T d2g80a1 94 IKAPVYADAIDFIK-RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDS-LDLNSYIDGYFDINTSGKKTETQSYANILRD 171 (225)
T ss_dssp CCBCCCHHHHHHHH-HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCC-BCCGGGCCEEECHHHHCCTTCHHHHHHHHHH
T ss_pred ccccchhhHHHHHh-hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHh-cCCccccceeeeccccCCCCChhHhHHHHHh
Confidence 34578999999885 56678999999887766554 42 68889999999865 46999999999999
Q ss_pred CCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 202 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
+|++|++|+||||+..|+.+|++ +|+++|+|...
T Consensus 172 lg~~p~e~l~VgD~~~Dv~~A~~----aG~~ti~v~r~ 205 (225)
T d2g80a1 172 IGAKASEVLFLSDNPLELDAAAG----VGIATGLASRP 205 (225)
T ss_dssp HTCCGGGEEEEESCHHHHHHHHT----TTCEEEEECCT
T ss_pred cccCchhceeecCCHHHHHHHHH----cCCEEEEEeCC
Confidence 99999999999999999999997 99999999864
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=4.8e-20 Score=152.62 Aligned_cols=116 Identities=14% Similarity=0.096 Sum_probs=88.1
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEEcC-------------
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL------------- 186 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~------------- 186 (263)
.++||||.++|+ ++|++++|+||++. ......+.. .|+.. .+..++.
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~cp~~p~~~~~~~~~~ 103 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVDL-DGIYYCPHHPQGSVEEFRQV 103 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCCC-SEEEEECCBTTCSSGGGBSC
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhh-hcccc-cceeeccccccccccccccc
Confidence 468999999999 89999999999984 233334443 55532 2223221
Q ss_pred --CCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCc-EEEEcCCCCChHHHHhhhhHhHHHhhhcc
Q 024758 187 --GTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN-LYLGNLFRFLCHILLLYLYAVALFAKMDV 261 (263)
Q Consensus 187 --~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~-~v~v~wGy~~~~~l~~~~~~~~~~~~~~~ 261 (263)
..||+|.+++++++++++++++++|||||.+||++|++ ||+. +++|.+|++..+..... |.-++.++.+
T Consensus 104 ~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~----Ag~~~~~lv~~g~~~~~~~~~~--ad~v~~~l~d 175 (182)
T d2gmwa1 104 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVA----ANVGTKVLVRTGKPITPEAENA--ADWVLNSLAD 175 (182)
T ss_dssp CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHH----TTCSEEEEESSSSCCCHHHHHH--CSEEESCGGG
T ss_pred ccccCCccccccchhhhcccccccccccCCCHHHHHHHHH----hCCCcEEEECCCCCCCcccccC--CCEEECCHHH
Confidence 13699999999999999999999999999999999997 9996 58899998877766543 4445555544
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.80 E-value=1.1e-20 Score=159.05 Aligned_cols=95 Identities=7% Similarity=0.055 Sum_probs=78.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCce---EEcCC--------------CCCcHHHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR---LYGLG--------------TGPKVNVLKQ 197 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~---v~G~~--------------~~pkp~~l~~ 197 (263)
.+++||+.++|+ ++|++++|+||+.+..++.+|++ +|+..+|.. .+..+ .+++|+.+..
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~-l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 152 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPS 152 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTT-TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHH
T ss_pred cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHH-cCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHH
Confidence 579999999999 89999999999999999999995 998766521 11111 1378899999
Q ss_pred HHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcC
Q 024758 198 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNL 238 (263)
Q Consensus 198 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~w 238 (263)
++++++.++++++|||||.+|+.+|++ ||+.+ ++.+
T Consensus 153 ~~~~~~~~~~~~i~iGDs~~Dl~~a~~----A~~~~-a~~~ 188 (226)
T d2feaa1 153 VIHELSEPNQYIIMIGDSVTDVEAAKL----SDLCF-ARDY 188 (226)
T ss_dssp HHHHHCCTTCEEEEEECCGGGHHHHHT----CSEEE-ECHH
T ss_pred HHHHhcCCCceEEEEeCchhhHHHHHH----CCEEE-Eecc
Confidence 999999999999999999999999987 88733 4433
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.71 E-value=4.4e-20 Score=159.29 Aligned_cols=108 Identities=10% Similarity=0.038 Sum_probs=78.9
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhc
Q 024758 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIK 224 (263)
Q Consensus 150 ~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~ 224 (263)
.++....++|++....-...+.. ..+..+|+.+.|.+ .||+|+++..+++++|++|++|+||||++ +||++|++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~ 212 (250)
T d2c4na1 134 VANGARFIATNPDTHGRGFYPAC-GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ 212 (250)
T ss_dssp HHTTCEEEESCCCSBSSTTCBCH-HHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH
T ss_pred HhccccccccccccccCceeecC-cchHHHHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHH
Confidence 34556788898765321111110 11122344444544 36999999999999999999999999996 59999998
Q ss_pred cCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhccc
Q 024758 225 EPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDVL 262 (263)
Q Consensus 225 ~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~~ 262 (263)
||+++|+|+||+++++++... ..|..++.++.+|
T Consensus 213 ----aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL 247 (250)
T d2c4na1 213 ----AGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp ----TTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred ----CCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHh
Confidence 999999999999999988754 3467777777776
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.70 E-value=9.3e-18 Score=144.72 Aligned_cols=70 Identities=9% Similarity=-0.001 Sum_probs=60.9
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChh-hHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhccc
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDVL 262 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~-Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~~ 262 (263)
||+|+++..+++++|++|++|+||||+.. ||++|++ |||++|+|+||+.+++++.++ ..|+.++.++.++
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~----aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIK----NDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHH----TTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHH----CCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 79999999999999999999999999976 9999998 999999999999988876533 3467777777665
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.67 E-value=2.8e-17 Score=130.13 Aligned_cols=97 Identities=14% Similarity=0.038 Sum_probs=71.5
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHH---HHHHhhC------CCCCCceEEcCCC---CCcHHHHHHHHhhC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVET---LLRELAG------VTITPDRLYGLGT---GPKVNVLKQLQKKP 202 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~---iL~~~~g------l~~~f~~v~G~~~---~pkp~~l~~~l~~l 202 (263)
..+||||.++|+ ++|++++|+||+++...+. -|+. .+ ...+++....... .|++......+.++
T Consensus 35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM-TRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH-HHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHH-HhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHh
Confidence 478999999999 8999999999998543322 2321 11 2234555555432 26777777777777
Q ss_pred CCCCCc-EEEEcCChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 203 EHQGLR-LHFVEDRLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 203 ~~~~~~-~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
...+.+ +++|||+..|+++|++ +|++|++|+||
T Consensus 114 ~~~~~~i~~~igD~~~dv~a~~~----~Gi~~~~V~~G 147 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRTQVVEMWRR----IGVECWQVASG 147 (149)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHH----TTCCEEECSCC
T ss_pred ccCCCceEEEEcCCHHHHHHHHH----CCCcEEEeCCC
Confidence 666555 4678999999999998 99999999999
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=1.4e-16 Score=134.77 Aligned_cols=97 Identities=13% Similarity=0.202 Sum_probs=71.9
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC------ceE-----EcCCC-C------CcHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------DRL-----YGLGT-G------PKVNVL 195 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f------~~v-----~G~~~-~------pkp~~l 195 (263)
..+++||+.++|+ ++|++++|+|++....++.++++ +|++.+. ... .|... . .|.+.+
T Consensus 80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~-lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v 158 (217)
T d1nnla_ 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 158 (217)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHH-hCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHH
Confidence 3578999999999 89999999999999999999995 9997431 111 11111 1 245666
Q ss_pred HHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCCh
Q 024758 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 196 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
..+.+. .++++++|||||.+|+.+++. ||+ +|.||.+..
T Consensus 159 ~~~~~~--~~~~~~~~vGDs~~Di~~~~~----ag~---~va~~~~~~ 197 (217)
T d1nnla_ 159 KLLKEK--FHFKKIIMIGDGATDMEACPP----ADA---FIGFGGNVI 197 (217)
T ss_dssp HHHHHH--HCCSCEEEEESSHHHHTTTTT----SSE---EEEECSSCC
T ss_pred HHHHhc--cCccccEEEEeCHhhHHHHHh----CCc---eEEECCCHH
Confidence 666553 567899999999999999987 886 455665443
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.66 E-value=7e-17 Score=136.89 Aligned_cols=100 Identities=23% Similarity=0.162 Sum_probs=81.3
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEEcCC------------
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG------------ 187 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~~------------ 187 (263)
.++||||.++|+ ++|++++|+||++. ......|+. .|+ +++.+++..
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~-~g~--~~~~~~~~~~~~~~~~~~~~~ 123 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGV--FVDMVLACAYHEAGVGPLAIP 123 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTC--CCSEEEEECCCTTCCSTTCCS
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhh-ccc--ccceEEEeccccccccccccc
Confidence 479999999999 88999999999762 233444553 555 344444321
Q ss_pred ----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChH
Q 024758 188 ----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCH 244 (263)
Q Consensus 188 ----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~ 244 (263)
.||+|.++.++++++++++++|+||||+.+||++|++ |||++++|.+|++..+
T Consensus 124 ~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~----AGi~~i~v~~g~~~~~ 180 (209)
T d2o2xa1 124 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKR----AGLAQGWLVDGEAAVQ 180 (209)
T ss_dssp SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHH----TTCSEEEEETCCCEEE
T ss_pred ccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHH----CCCcEEEEeCCCCccc
Confidence 2699999999999999999999999999999999998 9999999999997654
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.65 E-value=5.1e-17 Score=149.03 Aligned_cols=119 Identities=15% Similarity=-0.080 Sum_probs=97.9
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCce--EEc-CC--------------CCCcHHHHHHH
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR--LYG-LG--------------TGPKVNVLKQL 198 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~--v~G-~~--------------~~pkp~~l~~~ 198 (263)
+|+|||.++|+ ++|++++|+||++...++.++++ +||..||+. +++ .+ .+|+|+++..+
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~-lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 47889999999 89999999999999999999996 999999874 332 11 24899999988
Q ss_pred HhhC--------------CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHH--HhhhhHhHHHhhhccc
Q 024758 199 QKKP--------------EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHIL--LLYLYAVALFAKMDVL 262 (263)
Q Consensus 199 l~~l--------------~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l--~~~~~~~~~~~~~~~~ 262 (263)
+..+ +..+++|+||||+.+|+.+||+ ||+++|||+||++..+.- ++..+|+.+++++.+|
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~----Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el 369 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK----IGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL 369 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHH----HTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGH
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHH----CCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHH
Confidence 7554 5668899999999999999998 999999999999876432 2355677777777654
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=3.4e-17 Score=133.47 Aligned_cols=106 Identities=14% Similarity=0.149 Sum_probs=80.7
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEcCCc---------------hHHHHHHHHHhhCCCC---CCceEEcCC----CCC
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVTSNQ---------------SRFVETLLRELAGVTI---TPDRLYGLG----TGP 190 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~---------------~~~a~~iL~~~~gl~~---~f~~v~G~~----~~p 190 (263)
....+||||.++|+ ++|++++|+||++ .......|+. .|+.. ||+...+.+ .||
T Consensus 27 ~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~i~~~~~~~~~~~~~~KP 105 (161)
T d2fpwa1 27 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQFDEVLICPHLPADECDCRKP 105 (161)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHH-TTCCEEEEEEECCCGGGCCSSSTT
T ss_pred HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccc-cccccceeeecccccccccccccc
Confidence 45689999999999 8999999999986 2345566774 77742 232223322 369
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHH
Q 024758 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHIL 246 (263)
Q Consensus 191 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l 246 (263)
+|++++++++++|++|++++||||+..|+++|++ |||+++++.-+..+-..+
T Consensus 106 ~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~----aG~~~i~i~~~~~~~~~i 157 (161)
T d2fpwa1 106 KVKLVERYLAEQAMDRANSYVIGDRATDIQLAEN----MGINGLRYDRETLNWPMI 157 (161)
T ss_dssp SSGGGGGGC----CCGGGCEEEESSHHHHHHHHH----HTSEEEECBTTTBCHHHH
T ss_pred ccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHH----cCCeEEEECCCCCCHHHH
Confidence 9999999999999999999999999999999998 999999998776555544
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.62 E-value=2e-16 Score=129.38 Aligned_cols=103 Identities=14% Similarity=0.028 Sum_probs=83.9
Q ss_pred CCCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCC--------------CCcHHHHHHHH
Q 024758 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--------------GPKVNVLKQLQ 199 (263)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~--------------~pkp~~l~~~l 199 (263)
...+++|+.++++ .+|..++++|++....+....++ .++..++......+. .+++..+..++
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhc-cchhhhhhhhhccccccccccccccccccccccchhhhHH
Confidence 3579999999999 89999999999999999999996 888776655554220 15688999999
Q ss_pred hhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 200 KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 200 ~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
+.++++++++++||||.+|+.+++. ||+. |++ +..+++.+.
T Consensus 152 ~~~~~~~~~~i~iGDs~nDi~m~~~----ag~~-va~----na~~~lk~~ 192 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGANDISMFKK----AGLK-IAF----CAKPILKEK 192 (210)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHHH----CSEE-EEE----SCCHHHHTT
T ss_pred HHhcccccceEEecCCcChHHHHHH----CCCC-EEE----CCCHHHHHh
Confidence 9999999999999999999999987 8974 333 346666653
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.59 E-value=6.4e-16 Score=132.97 Aligned_cols=70 Identities=20% Similarity=0.048 Sum_probs=59.7
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhccc
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDVL 262 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~~ 262 (263)
||+|.++..+++++|++|++++||||+. +||.+|++ +|+++|+|+||+.+.+++... ..|.-+..++++|
T Consensus 185 KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~----aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL 256 (261)
T d1vjra_ 185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKN----AGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL 256 (261)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHH----HTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred CCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHH----CCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence 5999999999999999999999999995 69999998 999999999999999887543 3456566666554
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.57 E-value=3.3e-16 Score=134.51 Aligned_cols=70 Identities=11% Similarity=0.058 Sum_probs=58.2
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh-hhHhHHHhhhccc
Q 024758 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY-LYAVALFAKMDVL 262 (263)
Q Consensus 189 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~-~~~~~~~~~~~~~ 262 (263)
||+|+++.++++++|++|++++||||+. +||++|++ ||+++|+|+||+...+++.+. ..|.-+.++.+++
T Consensus 180 KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~----aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 180 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQ----NGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp TTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHH----HTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred ccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHH----CCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence 6999999999999999999999999996 59999997 999999999999877655432 2355666665554
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.28 E-value=1.2e-11 Score=100.08 Aligned_cols=102 Identities=9% Similarity=-0.033 Sum_probs=78.0
Q ss_pred CCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEc--CC------CCCcHHHHHHHHhhCCCCC
Q 024758 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG--LG------TGPKVNVLKQLQKKPEHQG 206 (263)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G--~~------~~pkp~~l~~~l~~l~~~~ 206 (263)
....+|+....+. ..+.+.+++|............. +++..++....- .. ..+++......++.++.++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 145 (206)
T d1rkua_ 67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 145 (206)
T ss_dssp TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred hccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHH-hCCchhhcceeeeecccccccccccchhhHHHHHHHhcccc
Confidence 3478899988888 88999999999999999999995 887655433221 11 1266777788888999999
Q ss_pred CcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHh
Q 024758 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLL 248 (263)
Q Consensus 207 ~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~ 248 (263)
+++++|||+.||+.+.+. ||+ ||..+ ..+++.+
T Consensus 146 ~eviaiGDg~NDi~Ml~~----Ag~---gIAmn--a~~~v~~ 178 (206)
T d1rkua_ 146 YRVIAAGDSYNDTTMLSE----AHA---GILFH--APENVIR 178 (206)
T ss_dssp CEEEEEECSSTTHHHHHH----SSE---EEEES--CCHHHHH
T ss_pred cceEEecCCccCHHHHHh----CCc---cEEEC--CCHHHHH
Confidence 999999999999999987 886 45444 4455543
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.95 E-value=7.9e-10 Score=90.80 Aligned_cols=90 Identities=11% Similarity=-0.015 Sum_probs=61.9
Q ss_pred hCCCcEEEEcC-CchHHHHHHHHHhhCCCCCCceEEcCC------C-CCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHH
Q 024758 150 LASSRIYIVTS-NQSRFVETLLRELAGVTITPDRLYGLG------T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 221 (263)
Q Consensus 150 ~~g~~laI~Tn-K~~~~a~~iL~~~~gl~~~f~~v~G~~------~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~a 221 (263)
.+...+.+... ...+.++.++++ ++.... ...+.. . .+|+..+..+++++|++++++++|||+.||+.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~m 183 (230)
T d1wr8a_ 107 DRRAGLVIMRETINVETVREIINE-LNLNLV--AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDA 183 (230)
T ss_dssp GCSSCEEECTTTSCHHHHHHHHHH-TTCSCE--EEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHH
T ss_pred cceeeEEEecccccHHHHHHHHHH-hccceE--EeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHH
Confidence 34444555443 345667888885 765422 222221 1 289999999999999999999999999999999
Q ss_pred hhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 222 VIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 222 A~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.+. ||+ +|..|.. .+++.+.+
T Consensus 184 l~~----ag~---~vav~na-~~~~k~~A 204 (230)
T d1wr8a_ 184 FKV----VGY---KVAVAQA-PKILKENA 204 (230)
T ss_dssp HHH----SSE---EEECTTS-CHHHHTTC
T ss_pred HHH----CCe---EEEECCC-CHHHHHhC
Confidence 987 785 4555644 45565543
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.94 E-value=3e-10 Score=94.56 Aligned_cols=52 Identities=6% Similarity=-0.144 Sum_probs=41.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
.|...+..+++++|++++++++|||+.+|+.+.+. +|. .|+| |-. .+++.+.
T Consensus 151 ~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~----a~~-~vav--~na-~~~~k~~ 202 (225)
T d1l6ra_ 151 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQL----PVR-KACP--ANA-TDNIKAV 202 (225)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTS----SSE-EEEC--TTS-CHHHHHH
T ss_pred chHHHHHHHhhhhccchhheeeecCCcchHHHHHH----CCe-EEEE--CCC-cHHHHHh
Confidence 68899999999999999999999999999999986 774 3344 422 4455543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.90 E-value=3.8e-09 Score=89.92 Aligned_cols=53 Identities=11% Similarity=-0.051 Sum_probs=43.3
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|++++++++|||+.+|+.+-+. +|. .|+|..+ .+++.+.+
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~----~~~-sva~~na---~~~~k~~A 242 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEE----AGL-RVAMENA---IEKVKEAS 242 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTT----CSE-EEECTTS---CHHHHHHC
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHh----CCc-EEEeCCC---CHHHHHhC
Confidence 78999999999999999999999999999999976 775 3455433 56666554
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.53 E-value=5.5e-08 Score=81.21 Aligned_cols=89 Identities=11% Similarity=-0.001 Sum_probs=63.7
Q ss_pred cCCCCcccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhhCCC--CCCceEEcCCC--C-CcHHHHHHHHhhCCC
Q 024758 136 GANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVT--ITPDRLYGLGT--G-PKVNVLKQLQKKPEH 204 (263)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~laI~TnK~~---~~a~~iL~~~~gl~--~~f~~v~G~~~--~-pkp~~l~~~l~~l~~ 204 (263)
....+.||+.++|+ ++|+++..+||..+ +.+.+-|++.+|+. ...+.++..+. + ++-..+ +++++
T Consensus 83 ~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~I----k~y~I 158 (209)
T d2b82a1 83 EFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWL----QDKNI 158 (209)
T ss_dssp GGCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHH----HHTTE
T ss_pred cccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHH----HHcCe
Confidence 34678899999999 89999999999653 33444443237873 33455555432 2 444433 45677
Q ss_pred CCCcEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 205 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 205 ~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
.+|+||...|+.+|++ ||+++|-|
T Consensus 159 ----~l~~GD~l~Df~aA~e----agi~~iRi 182 (209)
T d2b82a1 159 ----RIFYGDSDNDITAARD----VGARGIRI 182 (209)
T ss_dssp ----EEEEESSHHHHHHHHH----TTCEEEEC
T ss_pred ----EEEecCCHHHHhHHHH----cCCCceEe
Confidence 4999999999999998 99999887
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.52 E-value=4.2e-07 Score=79.44 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=63.1
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCC------------CC------CcHHHHH
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------------TG------PKVNVLK 196 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~------------~~------pkp~~l~ 196 (263)
..+-||+.++++ ++|++++|+|+--..+++.+|++ +|+...--.|++-. .+ .|-+.+.
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~-lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~ 212 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 212 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHH-TTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-cCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence 578999999999 89999999999999999999996 88853212344311 01 2334444
Q ss_pred HHHhh--CCCCCCcEEEEcCChhhHHHhhc
Q 024758 197 QLQKK--PEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 197 ~~l~~--l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
+.... ...+..++++||||.+|+.+|+.
T Consensus 213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g 242 (291)
T d2bdua1 213 KNTDYFSQLKDNSNIILLGDSQGDLRMADG 242 (291)
T ss_dssp TTHHHHHHTTTCCEEEEEESSSGGGGTTTT
T ss_pred hhHHHHhccCCcCcEEEEeCCHhHHHHHhC
Confidence 43332 23466789999999999999874
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.47 E-value=9.9e-08 Score=78.93 Aligned_cols=88 Identities=23% Similarity=0.274 Sum_probs=68.5
Q ss_pred CcccHHHHHH---hCCCcEEEEcCCch------------HHHHHHHHHhhCCCCCCceEEcC-C---CCCcHHHHHHHHh
Q 024758 140 LYPGVSDALK---LASSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGL-G---TGPKVNVLKQLQK 200 (263)
Q Consensus 140 lypGv~e~L~---~~g~~laI~TnK~~------------~~a~~iL~~~~gl~~~f~~v~G~-~---~~pkp~~l~~~l~ 200 (263)
+||||.+.|+ ++|+.++|+||.+. .....+++. +++. ++..++. . .+|+|-++..+++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~-l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHH-cCCC--ccEEEecCccccCCCccHHHHHHHH
Confidence 5899999999 88999999999642 224556664 6664 3444442 2 4599999999999
Q ss_pred hCC----CCCCcEEEEcCC-----------------hhhHHHhhccCcCCCCcEE
Q 024758 201 KPE----HQGLRLHFVEDR-----------------LATLKNVIKEPELDGWNLY 234 (263)
Q Consensus 201 ~l~----~~~~~~l~VGDs-----------------~~Di~aA~~~~~~Agi~~v 234 (263)
+++ ++.++++||||. ..|++.|+| +|++++
T Consensus 128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N----~gikF~ 178 (195)
T d1yj5a1 128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALN----VGLPFA 178 (195)
T ss_dssp TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHH----HTCCEE
T ss_pred HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHH----CCCccc
Confidence 985 778899999995 499999997 899874
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.46 E-value=1.6e-07 Score=79.58 Aligned_cols=53 Identities=17% Similarity=-0.076 Sum_probs=43.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++.+|++++++++|||+.||+.+-+. +|. .|+|..| .+++.+.+
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~----a~~-svam~na---~~~~k~~A 265 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEA----AGK-GVAMGNA---REDIKSIA 265 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHH----SSE-EEECTTC---CHHHHHHC
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHh----CCe-EEEeCCC---CHHHHHhC
Confidence 68999999999999999999999999999999986 774 4577665 45565443
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.36 E-value=2e-07 Score=78.50 Aligned_cols=54 Identities=9% Similarity=-0.161 Sum_probs=44.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYLY 251 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~~ 251 (263)
.|...+..+++.++++++++++|||+.+|+.+-+. +|. .++| | +..+++.+.+.
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~----~~~-~~am--~-na~~~lk~~a~ 250 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEY----AGV-GVAV--D-NAIPSVKEVAN 250 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSE-EEEC--T-TSCHHHHHHCS
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHh----CCc-EEEe--C-CCCHHHHHhCC
Confidence 68899999999999999999999999999999986 674 3345 4 45677776543
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.34 E-value=7e-07 Score=72.57 Aligned_cols=91 Identities=14% Similarity=0.104 Sum_probs=62.1
Q ss_pred cccCCCCcccHHHHHH---h-CCCcEEEEcCCchH------HHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCC
Q 024758 134 WIGANRLYPGVSDALK---L-ASSRIYIVTSNQSR------FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE 203 (263)
Q Consensus 134 ~~~~~~lypGv~e~L~---~-~g~~laI~TnK~~~------~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~ 203 (263)
+....+|+||+.++|+ + .+..+.|+|+.+.. ....=|++|+|-..+...+++.+ |. .+.
T Consensus 69 ff~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~---K~--------~~~ 137 (195)
T d1q92a_ 69 FFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD---KT--------VVS 137 (195)
T ss_dssp TTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC---ST--------TSC
T ss_pred HHhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc---cc--------eec
Confidence 3455699999999998 4 45678899987633 22334676565444444555443 21 122
Q ss_pred CCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCCh
Q 024758 204 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLC 243 (263)
Q Consensus 204 ~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~ 243 (263)
. + ++|.|++..+.+..+ +|+.+|...+.|+..
T Consensus 138 ~--d--~lIDD~p~n~~~~~~----~g~~~il~~~~~N~~ 169 (195)
T d1q92a_ 138 A--D--LLIDDRPDITGAEPT----PSWEHVLFTACHNQH 169 (195)
T ss_dssp C--S--EEEESCSCCCCSCSS----CSSEEEEECCTTTTT
T ss_pred C--e--EEecCcHHHHHHHhc----CCCeEEEECCCcccC
Confidence 2 2 899999999988765 899999999998764
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.25 E-value=1.3e-06 Score=73.35 Aligned_cols=53 Identities=9% Similarity=-0.006 Sum_probs=42.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+..+++++|++++++++|||+.+|+.+-+. +|.. ++|..+ .+++.+.+
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~----ag~~-vam~Na---~~~lk~~A 242 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKM----ARYS-FAMGNA---AENIKQIA 242 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----CSEE-EECTTC---CHHHHHHC
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHh----CCeE-EEeCCC---CHHHHHhC
Confidence 68899999999999999999999999999999976 6653 345443 56666554
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.22 E-value=9.9e-07 Score=72.35 Aligned_cols=43 Identities=12% Similarity=-0.059 Sum_probs=36.2
Q ss_pred CcHHHHHHHHhhC-CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEc
Q 024758 190 PKVNVLKQLQKKP-EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGN 237 (263)
Q Consensus 190 pkp~~l~~~l~~l-~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~ 237 (263)
.|...+..+++++ +.++++++.|||+.||+.+-+. +|. .++|.
T Consensus 179 ~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~----a~~-~va~~ 222 (243)
T d1wzca1 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEV----VDK-VFIVG 222 (243)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTT----SSE-EEEES
T ss_pred ccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHc----CCc-EEEeC
Confidence 7888999999998 4888999999999999999876 774 45663
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.14 E-value=1.4e-05 Score=66.71 Aligned_cols=52 Identities=4% Similarity=-0.222 Sum_probs=42.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
.|...+..+++++|++++++++|||+.+|+.+-+. +|. +|+|.-+ .+++.+.
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~----a~~-svav~na---~~~lk~~ 237 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRH----AAI-GVAMGQA---KEDVKAA 237 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSE-EEECTTS---CHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHh----CCe-EEEeCCC---CHHHHHh
Confidence 68899999999999999999999999999999976 787 4566433 4555543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.13 E-value=1.6e-05 Score=66.24 Aligned_cols=52 Identities=10% Similarity=-0.081 Sum_probs=42.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
.|...+..+++.++++++++++|||+.||+.+-+. +|. .|+|..+ .+++.+.
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~----a~~-~va~~na---~~~~k~~ 258 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSN----FKY-SFAVANA---TDSAKSH 258 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHS----CSE-EEECTTC---CHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHh----CCc-EEEeCCC---CHHHHHh
Confidence 78899999999999999999999999999999986 785 4566544 3555543
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=97.98 E-value=5.7e-06 Score=66.84 Aligned_cols=42 Identities=5% Similarity=-0.190 Sum_probs=32.5
Q ss_pred CcHHHHHH---HHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEE
Q 024758 190 PKVNVLKQ---LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (263)
Q Consensus 190 pkp~~l~~---~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v 236 (263)
.|...+.. .++++|+++++++.|||+.+|+.+-+. +|. .|+|
T Consensus 184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~----a~~-~vaV 228 (232)
T d1xvia_ 184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEV----MDY-AVIV 228 (232)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHT----SSE-EEEC
T ss_pred hHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHh----CCe-EEEE
Confidence 55555444 445679999999999999999999986 786 4555
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.91 E-value=1.7e-05 Score=65.40 Aligned_cols=52 Identities=13% Similarity=-0.051 Sum_probs=41.4
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
.|...+..+++.+|++++++++|||+.+|+.+-+. +|. .|+|. +..+++.+.
T Consensus 162 ~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~----~~~-~vav~---na~~~lk~~ 213 (244)
T d1s2oa1 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFET----SAR-GVIVR---NAQPELLHW 213 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTS----SSE-EEECT---TCCHHHHHH
T ss_pred chhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhh----CCc-EEEeC---CCCHHHHHH
Confidence 68899999999999999999999999999999976 673 44553 335555544
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.57 E-value=4.8e-05 Score=61.21 Aligned_cols=75 Identities=15% Similarity=0.172 Sum_probs=61.9
Q ss_pred HHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhccC
Q 024758 147 ALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (263)
Q Consensus 147 ~L~~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 226 (263)
.|+..|+.++|+|......++...++ +++.. ...+. .+|...+..+++++++++++++||||..+|+.+-+.
T Consensus 43 ~l~~~gi~~~iis~~~~~~v~~~~~~-l~~~~---~~~~~--~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~-- 114 (177)
T d1k1ea_ 43 MLMDADIQVAVLSGRDSPILRRRIAD-LGIKL---FFLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA-- 114 (177)
T ss_dssp HHHHTTCEEEEEESCCCHHHHHHHHH-HTCCE---EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH--
T ss_pred HHhhhcEEEEEecCCchhHHHHHHhh-hcccc---ccccc--ccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhh--
Confidence 34478999999999999999999986 87742 22232 368888999999999999999999999999999886
Q ss_pred cCCCC
Q 024758 227 ELDGW 231 (263)
Q Consensus 227 ~~Agi 231 (263)
+|+
T Consensus 115 --~g~ 117 (177)
T d1k1ea_ 115 --CGT 117 (177)
T ss_dssp --SSE
T ss_pred --CCe
Confidence 675
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.47 E-value=0.00028 Score=64.56 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=74.5
Q ss_pred cccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh--------CCCCCCceEEcCCCC--------------------
Q 024758 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA--------GVTITPDRLYGLGTG-------------------- 189 (263)
Q Consensus 141 ypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~--------gl~~~f~~v~G~~~~-------------------- 189 (263)
=|.+..+|+ +.|.++.++||.+-.++..+++..+ .|..+||.||..-.|
T Consensus 187 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l 266 (458)
T d2bdea1 187 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTM 266 (458)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTCCE
T ss_pred ChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCCcc
Confidence 477888888 7899999999999999999999666 677899999964211
Q ss_pred ------CcH-----HHHHHHHhhCCCCCCcEEEEcCCh-hhHHHhhccCcCCCCcEEEEcCC
Q 024758 190 ------PKV-----NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 190 ------pkp-----~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
.++ -.+..+.+-+|....+++||||+. .||...+. ..|+++++|--=
T Consensus 267 ~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk---~~gWrT~~Ii~E 325 (458)
T d2bdea1 267 TNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKK---DCNWRTALVVEE 325 (458)
T ss_dssp EECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHH---HHCSEEEEECTT
T ss_pred ccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhh---hcCCceEEehHH
Confidence 011 124455566688888999999997 58888875 389999999643
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.23 E-value=0.00094 Score=51.07 Aligned_cols=84 Identities=14% Similarity=0.093 Sum_probs=63.3
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC-CcHHHHHHHHhhCCCCCCcEEEEcC
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~l~~~~~~~l~VGD 214 (263)
++-|++.++++ +.|+++.|+|.-....++.+-++ +||+ .+++.... .|.+.+.. +.. ...+.||||
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~-lgI~----~v~~~~~p~~k~~~v~~----~q~-~~~v~~vGD 90 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKK----LQA-KEVVAFVGD 90 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCHHHHHHHHHH----HTT-TSCEEEEEC
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhh-hhhh----hhccccchhHHHHHHHH----HHc-CCEEEEEeC
Confidence 67899999998 89999999999999999999996 9984 45554321 33444433 332 246889999
Q ss_pred ChhhHHHhhccCcCCCCcEEEEcCC
Q 024758 215 RLATLKNVIKEPELDGWNLYLGNLF 239 (263)
Q Consensus 215 s~~Di~aA~~~~~~Agi~~v~v~wG 239 (263)
..+|..+-++ |++ +++.|
T Consensus 91 g~nD~~aL~~----Adv---gia~~ 108 (135)
T d2b8ea1 91 GINDAPALAQ----ADL---GIAVG 108 (135)
T ss_dssp SSSSHHHHHH----SSE---EEEEC
T ss_pred CCCcHHHHHh----CCe---eeecC
Confidence 9999999876 774 55555
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.80 E-value=0.00012 Score=58.80 Aligned_cols=50 Identities=10% Similarity=-0.132 Sum_probs=35.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhhHHHhhccCcCCCCcEEEEcCCCCChHHHHhhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLGNLFRFLCHILLLYL 250 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~~ 250 (263)
.|...+.+++ +.++++++.||| +.||+++-+. +|...++| +++++..+-+
T Consensus 185 sKg~al~~l~---~~~~~ev~afGD~~~~g~NDi~Ml~~----~g~~~~~v----~~~~~~~~~~ 238 (243)
T d2amya1 185 DKRYCLRHVE---NDGYKTIYFFGDKTMPGGNDHEIFTD----PRTMGYSV----TAPEDTRRIC 238 (243)
T ss_dssp SGGGGGGGTT---TSCCSEEEEEECSCC---CCCHHHHC----TTEEEEEC----SSHHHHHHHH
T ss_pred CHHHHHHHHh---CCCcceEEEEcCCCCCCCCcHHHHHc----cCCcEEEe----CCHHHHHHHH
Confidence 5666666553 678999999999 6699999876 78666666 4566655433
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.40 E-value=0.0069 Score=47.63 Aligned_cols=91 Identities=10% Similarity=0.036 Sum_probs=63.4
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE-----EcCC-------------------CCCc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL-----YGLG-------------------TGPK 191 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v-----~G~~-------------------~~pk 191 (263)
+|-|+++++++ +.|+++.++|.-....++.+-++ +||...-..+ .|.+ ..-.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~-~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHH-cCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 67899999998 89999999999999999999996 9995322221 1111 0012
Q ss_pred HH---HHHHHHhhCCCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCC
Q 024758 192 VN---VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFR 240 (263)
Q Consensus 192 p~---~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy 240 (263)
|+ .+.+.+++.| ..+.||||..+|..+-++ |++ |+.-|-
T Consensus 99 p~~K~~lv~~l~~~g---~~Va~vGDG~nD~~AL~~----Adv---GIa~~~ 140 (168)
T d1wpga2 99 PSHKSKIVEYLQSYD---EITAMTGDGVNDAPALKK----AEI---GIAMGS 140 (168)
T ss_dssp HHHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHH----SSE---EEEETT
T ss_pred hhHHHHHHHHHHhcc---cceeEEecCCCCHHHHHh----CCE---EEEecc
Confidence 32 2333344443 568999999999999887 664 555553
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.66 E-value=0.0012 Score=52.46 Aligned_cols=50 Identities=10% Similarity=-0.091 Sum_probs=37.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCCh----hhHHHhhccCcCCCCcEEEEcCCCCChHHHHhh
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRL----ATLKNVIKEPELDGWNLYLGNLFRFLCHILLLY 249 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~----~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~~~ 249 (263)
.|...+..+++ .+.++++.|||+. ||+++=+. ||...++|. +..++++.+
T Consensus 185 sKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~----a~~~~~av~---na~~~~k~~ 238 (244)
T d2fuea1 185 DKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFAD----PRTVGHSVV---SPQDTVQRC 238 (244)
T ss_dssp STTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHS----TTSEEEECS---SHHHHHHHH
T ss_pred cHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHc----CCCcEEEcC---CHHHHHHHH
Confidence 67888888764 4889999999985 99999876 887777774 445555544
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.20 E-value=0.0019 Score=51.11 Aligned_cols=30 Identities=7% Similarity=0.005 Sum_probs=24.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhhHHHhhc
Q 024758 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (263)
Q Consensus 190 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 224 (263)
.|...+..++++ +++++|||+.+|+.+=+.
T Consensus 159 ~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf~~ 188 (229)
T d1u02a_ 159 NKGSAIRSVRGE-----RPAIIAGDDATDEAAFEA 188 (229)
T ss_dssp CHHHHHHHHHTT-----SCEEEEESSHHHHHHHHT
T ss_pred CHHHHHHHHhcc-----ccceeecCCCChHHHHhc
Confidence 678888887753 678999999999988764
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.48 E-value=0.087 Score=43.95 Aligned_cols=123 Identities=11% Similarity=0.095 Sum_probs=81.4
Q ss_pred hhhhHHhhhcCCHHHHHHHHHHHHHHHHhhhhhccccCCCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 024758 100 IKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT 177 (263)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~ 177 (263)
|...|+..+|+..+++.+.-+ . ..++-||+.++|+ ++-.+-+|+|+.-+..++++-+ +.|+
T Consensus 57 LIvPFl~a~Gvt~edL~~fSE----~-----------~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~-~~gf- 119 (308)
T d1y8aa1 57 LLTPFLAAAGVKNRDVERIAE----L-----------SAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTAS-MIGV- 119 (308)
T ss_dssp HHHHHHHHTTCCHHHHHHHHH----H-----------HCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHH-HTTC-
T ss_pred hHHHHHHHhCCCHHHHHHHhh----h-----------ceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHh-hcCC-
Confidence 445677888888876644322 1 2478899999999 7889999999999999999999 4888
Q ss_pred CCCceEEcCCC----C--C-------------------------------------------------cHHHHHHHHhhC
Q 024758 178 ITPDRLYGLGT----G--P-------------------------------------------------KVNVLKQLQKKP 202 (263)
Q Consensus 178 ~~f~~v~G~~~----~--p-------------------------------------------------kp~~l~~~l~~l 202 (263)
++. +++-+. - | |..++...++..
T Consensus 120 -p~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~ 197 (308)
T d1y8aa1 120 -RGE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESK 197 (308)
T ss_dssp -CSE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHH
T ss_pred -Cce-eecccccccccCCChHHHHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccc
Confidence 344 443220 0 1 123344455555
Q ss_pred CCCCCcEEEEcCChhhHHHhhccCcCCCCcEEEEcCCCCChHHHH
Q 024758 203 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLGNLFRFLCHILL 247 (263)
Q Consensus 203 ~~~~~~~l~VGDs~~Di~aA~~~~~~Agi~~v~v~wGy~~~~~l~ 247 (263)
+..+. +|||||.+|++.-+.+ -|-.-++|++- |+.-.|.
T Consensus 198 ~~~~~--~~VGDSITDve~Lr~~---r~~gGlaIsFN-GN~Yal~ 236 (308)
T d1y8aa1 198 GIDFP--VVVGDSISDYKMFEAA---RGLGGVAIAFN-GNEYALK 236 (308)
T ss_dssp TCSSC--EEEECSGGGHHHHHHH---HHTTCEEEEES-CCHHHHT
T ss_pred cCCcc--eeccCccccHHHHHHH---hcCCCeeEEec-Ccccccc
Confidence 66654 9999999999887653 22223456554 3444443
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=94.29 E-value=0.0079 Score=45.12 Aligned_cols=47 Identities=19% Similarity=0.109 Sum_probs=35.8
Q ss_pred CCCcccHHHHHH---hCCCcEEEEcCCc---------------hHHHHHHHHHhhCCCCCCceEEcC
Q 024758 138 NRLYPGVSDALK---LASSRIYIVTSNQ---------------SRFVETLLRELAGVTITPDRLYGL 186 (263)
Q Consensus 138 ~~lypGv~e~L~---~~g~~laI~TnK~---------------~~~a~~iL~~~~gl~~~f~~v~G~ 186 (263)
+.|.|++.+.|. ++|+++.|.|+.. ...+..-|++ .|+ .|-..+.|.
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~-~gI-~Yd~Li~gK 87 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDK-HQV-PYDEILVGK 87 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHH-TTC-CCSEEEECC
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHH-cCC-CceEEEECC
Confidence 367888888888 8999999999885 3557777886 898 465555563
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.26 E-value=0.0046 Score=49.13 Aligned_cols=90 Identities=8% Similarity=-0.062 Sum_probs=64.7
Q ss_pred CCCcccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEcCCCC--CcHHHHHHHHhhCCCCCCcEEEEc
Q 024758 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVE 213 (263)
Q Consensus 138 ~~lypGv~e~L~--~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~--pkp~~l~~~l~~l~~~~~~~l~VG 213 (263)
+.+-||+.++|+ .+.+.++|-|+-.++.|+.+++. +.-...|......+.- .... ..+-++.+|-+.+++++|.
T Consensus 54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~-ldp~~~~~~~~~r~~c~~~~~~-~~KdL~~l~~~l~~vvivD 131 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGN-YVKDLSRLGRDLRRVLILD 131 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCSSCCEEEEECGGGSEEETTE-EECCGGGSCSCGGGEEEEC
T ss_pred EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHH-hccCCceeEEEEeeeeeecCCc-ccccHhhcCCCHHHeEEEc
Confidence 456799999999 78899999999999999999996 8776666666554311 1111 1123566788889999999
Q ss_pred CChhhHHHhhccCcCCCCcE
Q 024758 214 DRLATLKNVIKEPELDGWNL 233 (263)
Q Consensus 214 Ds~~Di~aA~~~~~~Agi~~ 233 (263)
|+..-...--. ++|.+
T Consensus 132 d~~~~~~~~~~----N~I~I 147 (181)
T d1ta0a_ 132 NSPASYVFHPD----NAVPV 147 (181)
T ss_dssp SCGGGGTTCGG----GBCCC
T ss_pred CChhhhhcCcc----CeeEe
Confidence 99886644222 46655
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=92.51 E-value=0.016 Score=44.87 Aligned_cols=16 Identities=19% Similarity=0.310 Sum_probs=13.8
Q ss_pred CcEEEEecCcccccCH
Q 024758 2 EDLYALDFDGVICDSC 17 (263)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (263)
.|+|+||+||||++..
T Consensus 2 ~K~i~~D~DGtL~~~~ 17 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEP 17 (161)
T ss_dssp CEEEEECCBTTTBCCC
T ss_pred CcEEEEeCCCCeEeeC
Confidence 4899999999999754
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=90.93 E-value=0.032 Score=41.39 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=30.7
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCCCceE
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRL 183 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~---a~~iL~~~~gl~~~f~~v 183 (263)
+|+|++.+.|+ ++|.++.|.|+.+... +..-|++ .|+. |+.+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~-~~i~--yd~i 68 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-RGLE--FYAA 68 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-TTCC--CSEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHH-cCCC--ceeh
Confidence 46788888888 8999999999997755 4455664 6663 4555
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=87.71 E-value=0.099 Score=40.92 Aligned_cols=92 Identities=13% Similarity=0.054 Sum_probs=48.0
Q ss_pred cccHHHHHHhCCCcEEEEcCCch-HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhhH
Q 024758 141 YPGVSDALKLASSRIYIVTSNQS-RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (263)
Q Consensus 141 ypGv~e~L~~~g~~laI~TnK~~-~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 219 (263)
.+-+....++.++.......++. ...+.++++ +|+..---..+|.+ -++-++ ++..|.+ +-++|+...+
T Consensus 59 ~~~v~~~~~~l~~~~~~~~~~~K~~~l~~~~~~-~~i~~~~v~~vGDd-~nDl~~----l~~~g~s----iap~nA~~~v 128 (177)
T d1k1ea_ 59 SPILRRRIADLGIKLFFLGKLEKETACFDLMKQ-AGVTAEQTAYIGDD-SVDLPA----FAACGTS----FAVADAPIYV 128 (177)
T ss_dssp CHHHHHHHHHHTCCEEEESCSCHHHHHHHHHHH-HTCCGGGEEEEECS-GGGHHH----HHHSSEE----EECTTSCHHH
T ss_pred hhHHHHHHhhhcccccccccccHHHHHHHHHHH-hcCCcceeEEecCC-ccHHHH----HhhCCeE----EEcCCccHHH
Confidence 34444434344444444443333 345677785 88875433344544 244443 5555665 7788887777
Q ss_pred HHhhccCcCCCCcEEEEcCCC-CChHHHHhhh
Q 024758 220 KNVIKEPELDGWNLYLGNLFR-FLCHILLLYL 250 (263)
Q Consensus 220 ~aA~~~~~~Agi~~v~v~wGy-~~~~~l~~~~ 250 (263)
.. -.+.|.-..|- +--.|+++.+
T Consensus 129 k~--------~A~~Vt~~~GG~GavrE~~e~i 152 (177)
T d1k1ea_ 129 KN--------AVDHVLSTHGGKGAFREMSDMI 152 (177)
T ss_dssp HT--------TSSEECSSCTTTTHHHHHHHHH
T ss_pred HH--------hCCEEeCCCCCCchHHHHHHHH
Confidence 43 33455555543 3355565554
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=87.26 E-value=0.35 Score=38.65 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=39.9
Q ss_pred CCcccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEEc
Q 024758 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (263)
Q Consensus 139 ~lypGv~e~L~---~~g~~laI~TnK~~~~a~~iL~~~~gl~~~f~~v~G 185 (263)
++-|...++|+ ++|++++|+|+++...+..+++. +++...++.+++
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~-l~l~~~~~~~i~ 69 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKE-LHMEQPGDYCIT 69 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHH-TTCCSTTCEEEE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-hcCcCCCcEEEE
Confidence 45688888888 89999999999999999999996 999887777764
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.88 E-value=0.29 Score=37.70 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=20.2
Q ss_pred EEEEecCcccccCHHHHHHHHHHHHHHh
Q 024758 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (263)
Q Consensus 4 ~vlFDlDGTLvDS~~di~~s~~~~~~~~ 31 (263)
+++|||||||+|+-..+......+++++
T Consensus 3 i~lFDlDGTLl~~~~~is~~~~~~i~~l 30 (244)
T d2fuea1 3 LCLFDVDGTLTPARQKIDPEVAAFLQKL 30 (244)
T ss_dssp EEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred EEEEccccCccCCCCcCCHHHHHHHHHH
Confidence 3458999999998766655555566655
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=85.73 E-value=0.11 Score=41.57 Aligned_cols=47 Identities=9% Similarity=0.058 Sum_probs=26.1
Q ss_pred Cch-HHHHHHHHHhhCCCCCCceEEcCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024758 161 NQS-RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (263)
Q Consensus 161 K~~-~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 216 (263)
||. .....++++ ++++.--..++|.. ..+ ..+.+..|+. +++|-...
T Consensus 129 KP~p~ml~~a~~~-~~i~~~~~~~VGD~---~~D--i~aA~~AGi~---~i~v~~g~ 176 (209)
T d2o2xa1 129 KPNPGMLVEAGKR-LALDLQRSLIVGDK---LAD--MQAGKRAGLA---QGWLVDGE 176 (209)
T ss_dssp TTSCHHHHHHHHH-HTCCGGGCEEEESS---HHH--HHHHHHTTCS---EEEEETCC
T ss_pred cccchhhhHhHHH-hCCCccceEEeCCC---HHH--HHHHHHCCCc---EEEEeCCC
Confidence 543 345667775 88876556677743 123 2345556764 45664443
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=83.22 E-value=1.1 Score=32.76 Aligned_cols=12 Identities=25% Similarity=0.548 Sum_probs=10.3
Q ss_pred cEEEEecCcccc
Q 024758 3 DLYALDFDGVIC 14 (263)
Q Consensus 3 ~~vlFDlDGTLv 14 (263)
|.++||||||||
T Consensus 2 K~i~~DiDGTI~ 13 (124)
T d1xpja_ 2 KKLIVDLDGTLT 13 (124)
T ss_dssp CEEEECSTTTTB
T ss_pred CEEEEeCCCCeE
Confidence 578899999996
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=82.89 E-value=0.46 Score=41.07 Aligned_cols=23 Identities=26% Similarity=0.267 Sum_probs=18.8
Q ss_pred cEEEEecCcccccCHHHHHHHHH
Q 024758 3 DLYALDFDGVICDSCEETALSAV 25 (263)
Q Consensus 3 ~~vlFDlDGTLvDS~~di~~s~~ 25 (263)
|.|+||+||+|+|.-.-.-.|..
T Consensus 2 ~~i~fd~dGVll~~~~~~D~s~l 24 (380)
T d1qyia_ 2 KKILFDVDGVFLSEERCFDVSAL 24 (380)
T ss_dssp CEEEECSBTTTBCSHHHHHHHHH
T ss_pred ceEEEeCCcEEEcceeecchHhh
Confidence 78999999999999886655543
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=80.07 E-value=0.25 Score=39.24 Aligned_cols=14 Identities=29% Similarity=0.612 Sum_probs=12.5
Q ss_pred cEEEEecCcccccC
Q 024758 3 DLYALDFDGVICDS 16 (263)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (263)
|.++||.||||+-+
T Consensus 22 Kia~fDrDGtLik~ 35 (195)
T d1yj5a1 22 KVAAFDLDGTLITT 35 (195)
T ss_dssp CEEEECSBTTTEEC
T ss_pred cEEEEECCCceEee
Confidence 78999999999865
|