Citrus Sinensis ID: 024806

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260--
Protein Sequence
MASTTFSLSLSTLASSTAYNSGNHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV
Secondary Structure (PSIPRED)
cccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccHHHcccHHHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHccccccccccEEEccccccccccHHHHHHHHHHHccccccEEccccEEc
Secondary Structure Prediction (SSPRO)
cccccEEEEHHHHccccccccccccccEEcccccccccccccccccccccccccccccccccHHccccccccccccccEEEEEccccEcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHccccHHHHcEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MASTTFSLSLSTLASstaynsgnhiptiscksneksslclssssflgsrlnvsrrtssanpmsmrnVRVTCsasvlpsallfdcdgvlvdtekdghrisfndtfkekelgvtwDVDLYGELLkigggkerMTAYFnktgwpekapsdeEERKQFIASLHKRKTELFMVLIEkkllplrpGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIfagdvvprkkpdpvkicsLTVDIVCNVLKThahknvlv
Flexible Loop (DISEMBL)
MASTTFSLSLSTLASSTAYNSGNHIPTISCKSNEKSSLCLSsssflgsrlnvsrrtssanpmsmrNVRVTCSASVLPSALLFDCDGVLVDTEKDghrisfndtfkekelgvtwdVDLYGELLKIGGGKERMTAYFNKtgwpekapsdeEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAvcstsnekAVTAIVSFLLGPERAEKIQifagdvvprkkpdpvkICSLTVDIVCNVLkthahknvlv
Low Complexity Region (SEG)
MasttfslslstlasstaYNSGNHIPTIscksneksslclssssflgsrlnvsRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV
Disordered region (IsUnstruct)
******************************************************************VRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGW*************FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAH*****
Disordered Region (DISOPRED)
*********LSTLA****************************************************************ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV
Disordered Region (DISEMBL)
*********LSTLASSTAYNSGNHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWP**********KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV
Disordered Region (DISPRO)
*****FSLSLSTLASSTAYNS*NH*P*ISC*******************************************SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHK****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASTTFSLSLSTLASSTAYNSGNHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	262	2.2.26 [Sep-21-2011]
O33513	227	Protein CbbY OS=Rhodobact	yes	no	0.572	0.660	0.375	2e-20
P95649	230	Protein CbbY OS=Rhodobact	yes	no	0.572	0.652	0.388	2e-20
P40119	254	Protein CbbY, chromosomal	yes	no	0.576	0.594	0.367	2e-19
Q04541	254	Protein CbbY, plasmid OS=	yes	no	0.580	0.598	0.363	1e-18

>sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 10/160 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           AL+FD DG L +TE + HR +FN+TF  + L   W  + Y  LL+  GGKERM  +    
Sbjct: 5   ALIFDVDGTLAETE-EVHRQAFNETFAAQGLDWYWSKEDYRTLLRTTGGKERMAKHRENL 63

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
           G     PSD +     IA LHK KT+ ++ +I    + L PGVA+LID+A   G+++A+ 
Sbjct: 64  G---SGPSDAK-----IADLHKAKTQRYVEIIASGQVGLLPGVAELIDRAKASGLRLAIA 115

Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIF-AGDVVPRKKPDP 237
           +T+    V A+++        +  ++  AGD V +KKP P
Sbjct: 116 TTTTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAP 155

Rhodobacter capsulatus (taxid: 1061)

>sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 12/162 (7%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-N 136
            A+LFD DG L +TE + HR +FN+TF    +   WD + Y ELL   GGKER+  +  +
Sbjct: 3   EAILFDVDGTLAETE-ELHRRAFNETFAALGVDWFWDREEYRELLTTTGGKERIARFLRH 61

Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
           + G P   P         IA +H+ KTE F+ L+ +  + LRPG+A LI +A   G+++A
Sbjct: 62  QKGDPAPLP---------IADIHRAKTERFVALMAEGEIALRPGIADLIAEAKRAGIRLA 112

Query: 197 VCSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVVPRKKPDP 237
           V +T++   V A+     G P R     I AGD+V  KKP P
Sbjct: 113 VATTTSLPNVEALCRACFGHPAREIFDVIAAGDMVAEKKPSP 154

Rhodobacter sphaeroides (taxid: 1063)

>sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3

 Score = 95.9 bits (237), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 84/166 (50%), Gaps = 15/166 (9%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
            AL+FD DG L DTE   H  +FN  F E  L   WD  LY  LLK+ GGKER+  Y+  
Sbjct: 2   QALIFDVDGTLADTES-AHLQAFNAAFAEVGLDWYWDAPLYTRLLKVAGGKERLMHYWRM 60

Query: 138 TGWPEKAPSDEEER----KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
                     EE R    K+ I ++H  KT  +   +    LPLRPG+A+LID+A E G+
Sbjct: 61  V-------DPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGL 113

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPRKKPDP 237
            +A+ +T+    + A++   LG +   +     GD      KKP P
Sbjct: 114 PLAIATTTTPANLDALLQAPLGADWRRRFAAI-GDAGTTAIKKPAP 158

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666)

>sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1

 Score = 93.6 bits (231), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 13/165 (7%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
            AL+FD DG L DTE   H  +FN  F E  L   WD  LY  LLK+ GGKER+  Y+  
Sbjct: 2   QALIFDVDGTLADTET-AHLQAFNAAFAEVGLDWHWDAPLYTRLLKVAGGKERLMHYWRM 60

Query: 138 TGWPEKAPSDEEER----KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
                     EE R    K+ I ++H  KT  +   +    LPLRPG+A+LI +A E G+
Sbjct: 61  V-------DPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGL 113

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDP 237
            +A+ +T+    + A++   LG + R     I        KKP P
Sbjct: 114 PLAIATTTTPANLDALLQAHLGADWRGRFAAICDAGTTAIKKPAP 158

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	262
255540407	321	2-deoxyglucose-6-phosphate phosphatase,	0.889	0.725	0.735	3e-90
118488927	328	unknown [Populus trichocarpa x Populus d	0.748	0.597	0.82	3e-88
224136009	328	predicted protein [Populus trichocarpa]	0.748	0.597	0.815	2e-87
225456794	324	PREDICTED: protein CbbY [Vitis vinifera]	0.740	0.598	0.789	5e-87
449440594	319	PREDICTED: protein CbbY-like [Cucumis sa	0.744	0.611	0.798	7e-86
21554817	319	unknown [Arabidopsis thaliana]	0.721	0.592	0.811	8e-86
18408627	319	haloacid dehalogenase-like hydrolase dom	0.721	0.592	0.811	1e-85
388512915	329	unknown [Lotus japonicus]	0.770	0.613	0.738	2e-85
51970096	319	unknown protein [Arabidopsis thaliana]	0.721	0.592	0.811	3e-85
4678346	686	putative protein [Arabidopsis thaliana]	0.725	0.276	0.807	5e-85

>gi|255540407|ref|XP_002511268.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223550383|gb|EEF51870.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 178/242 (73%), Positives = 198/242 (81%), Gaps = 9/242 (3%)

Query: 1   MASTTFSLSLSTLASSTAYNSG---NHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTS 57
           MAS + SLSL+T + S++ +      + P IS   + KS L   SS+  G+++ V +  +
Sbjct: 1   MASNSISLSLATFSISSSPSFSSSQKNTP-ISILKSCKSKL---SSTLFGTKVCVDKTKA 56

Query: 58  SA--NPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDV 115
           S   N  S  +   TC AS LPSALLFDCDGVLVDTEKDGHRISFNDTF E+ELGVTWDV
Sbjct: 57  SKAINKRSTTSTGFTCLASALPSALLFDCDGVLVDTEKDGHRISFNDTFNERELGVTWDV 116

Query: 116 DLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLL 175
           DLYGELLKIGGGKERMTAYFNKTGWPEKAP +EEERK+FIASLHKRKTELFM LIEKKLL
Sbjct: 117 DLYGELLKIGGGKERMTAYFNKTGWPEKAPKNEEERKEFIASLHKRKTELFMALIEKKLL 176

Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
           PLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVS LLGPERAEKI+IFAGDVVPRKKP
Sbjct: 177 PLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIKIFAGDVVPRKKP 236

Query: 236 DP 237
           DP
Sbjct: 237 DP 238

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488927|gb|ABK96272.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 164/200 (82%), Positives = 175/200 (87%), Gaps = 4/200 (2%)

Query: 42  SSSFLGSRLNVSRRTSSANPMSMRNVR--VTC--SASVLPSALLFDCDGVLVDTEKDGHR 97
           SSS LG+R+ V  +T+    +   +     TC  S+SVLPSALLFDCDGVLVDTEKDGHR
Sbjct: 46  SSSLLGTRIRVYNKTARTRVVEKSSTSNGTTCLASSSVLPSALLFDCDGVLVDTEKDGHR 105

Query: 98  ISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIAS 157
           ISFNDTF E+ELGVTWDVDLYGELLKIGGGKERMTAYFNKT WPEKAP  EEERK+FIAS
Sbjct: 106 ISFNDTFNERELGVTWDVDLYGELLKIGGGKERMTAYFNKTRWPEKAPKSEEERKEFIAS 165

Query: 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217
           LHKRKTELFM LIEKKLLPLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVSFLLG E
Sbjct: 166 LHKRKTELFMALIEKKLLPLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSFLLGAE 225

Query: 218 RAEKIQIFAGDVVPRKKPDP 237
           RAEKI+IFAGDVVPRKKPDP
Sbjct: 226 RAEKIKIFAGDVVPRKKPDP 245

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136009|ref|XP_002322216.1| predicted protein [Populus trichocarpa] gi|222869212|gb|EEF06343.1| predicted protein [Populus trichocarpa]

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 163/200 (81%), Positives = 174/200 (87%), Gaps = 4/200 (2%)

Query: 42  SSSFLGSRLNVSRRTSSANPMSMRNVR--VTC--SASVLPSALLFDCDGVLVDTEKDGHR 97
           SSS LG+R+ V  +T+    +   +     TC  S+SVLPSALLFDCDGVLVDTEKDGHR
Sbjct: 46  SSSLLGTRIRVYNKTTRTRVVEKSSTSNGTTCLASSSVLPSALLFDCDGVLVDTEKDGHR 105

Query: 98  ISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIAS 157
           ISFNDTF E+ELGVTWDVDLYGELLKIGGGKERMTAYFNKT WPEKAP  E ERK+FIAS
Sbjct: 106 ISFNDTFNERELGVTWDVDLYGELLKIGGGKERMTAYFNKTRWPEKAPKSEVERKEFIAS 165

Query: 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217
           LHKRKTELFM LIEKKLLPLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVSFLLG E
Sbjct: 166 LHKRKTELFMALIEKKLLPLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSFLLGAE 225

Query: 218 RAEKIQIFAGDVVPRKKPDP 237
           RAEKI+IFAGDVVPRKKPDP
Sbjct: 226 RAEKIKIFAGDVVPRKKPDP 245

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456794|ref|XP_002277650.1| PREDICTED: protein CbbY [Vitis vinifera] gi|297733644|emb|CBI14891.3| unnamed protein product [Vitis vinifera]

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 165/209 (78%), Positives = 176/209 (84%), Gaps = 15/209 (7%)

Query: 42  SSSFLGSRLNVSRRT-------SSANPMSMRNVRVT------CSASVLPSALLFDCDGVL 88
           SSS  G+R  ++RR        ++  P+  R  R +      CSA  LPSALLFDCDGVL
Sbjct: 35  SSSLFGTRPGITRRAITTTTTTTTTRPVIRRGARHSGVRFSVCSA--LPSALLFDCDGVL 92

Query: 89  VDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDE 148
           VDTEKDGHRISFNDTF E+ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAP  E
Sbjct: 93  VDTEKDGHRISFNDTFAERELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPKSE 152

Query: 149 EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA 208
           EERK+FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL KGV VAVCSTSNEKAV+A
Sbjct: 153 EERKEFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALGKGVNVAVCSTSNEKAVSA 212

Query: 209 IVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           IVS LLGPERAEKI+IFAGDVVPRKKPDP
Sbjct: 213 IVSCLLGPERAEKIKIFAGDVVPRKKPDP 241

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440594|ref|XP_004138069.1| PREDICTED: protein CbbY-like [Cucumis sativus] gi|449501370|ref|XP_004161349.1| PREDICTED: protein CbbY-like [Cucumis sativus]

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 159/199 (79%), Positives = 174/199 (87%), Gaps = 4/199 (2%)

Query: 42  SSSFLGSRLNVSRRTSSANPMSMRNVR--VTCSAS-VLPSALLFDCDGVLVDTEKDGHRI 98
           S+S LG  L++   TS   P   +N    +TC AS +LPSALLFDCDGVLVDTEKDGHRI
Sbjct: 39  STSLLGKSLSL-YPTSRIRPTDAKNASNGITCQASSILPSALLFDCDGVLVDTEKDGHRI 97

Query: 99  SFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASL 158
           SFN+TF+EKELGVTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE+ERK FIA L
Sbjct: 98  SFNETFEEKELGVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEDERKAFIAGL 157

Query: 159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER 218
           HKRKT+LFM LIEK+LLPLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVSFLLG +R
Sbjct: 158 HKRKTDLFMALIEKQLLPLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSFLLGSQR 217

Query: 219 AEKIQIFAGDVVPRKKPDP 237
           AE+I+IFAGDVVPRKKPDP
Sbjct: 218 AEQIKIFAGDVVPRKKPDP 236

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554817|gb|AAM63700.1| unknown [Arabidopsis thaliana]

 Score =  322 bits (826), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 172/196 (87%), Gaps = 7/196 (3%)

Query: 49  RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
           +L  + ++  A PM   S R+V VTCSAS     LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41  KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100

Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
           DTFKE++L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKERDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160

Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
           KTELFMVLIEKKLLPLRPGVAKL+DQAL  GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220

Query: 222 IQIFAGDVVPRKKPDP 237
           I+IFAGDVVP+KKPDP
Sbjct: 221 IKIFAGDVVPKKKPDP 236

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18408627|ref|NP_566903.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|13877975|gb|AAK44065.1|AF370250_1 unknown protein [Arabidopsis thaliana] gi|17104703|gb|AAL34240.1| unknown protein [Arabidopsis thaliana] gi|26451286|dbj|BAC42744.1| unknown protein [Arabidopsis thaliana] gi|51969874|dbj|BAD43629.1| unknown protein [Arabidopsis thaliana] gi|51971787|dbj|BAD44558.1| unknown protein [Arabidopsis thaliana] gi|332644893|gb|AEE78414.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 172/196 (87%), Gaps = 7/196 (3%)

Query: 49  RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
           +L  + ++  A PM   S R+V VTCSAS     LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41  KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100

Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
           DTFKE++L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKERDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160

Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
           KTELFMVLIEKKLLPLRPGVAKL+DQAL  GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220

Query: 222 IQIFAGDVVPRKKPDP 237
           I+IFAGDVVP+KKPDP
Sbjct: 221 IKIFAGDVVPKKKPDP 236

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512915|gb|AFK44519.1| unknown [Lotus japonicus]

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 164/222 (73%), Positives = 181/222 (81%), Gaps = 20/222 (9%)

Query: 23  NHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTSSANPMSMRNV---RVTCSASV---- 75
           +H+PT S          L+ +S L S L +S  +S A   SMR     R++CSAS     
Sbjct: 38  HHVPTSS----------LTGTSTLAS-LKIS--SSPATTTSMRTATRRRLSCSASASPST 84

Query: 76  LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF 135
           LPSALLFDCDGVLVDTEKDGHRISFN TF+E+ELGVTWDVDLYGELLKIGGGKERMTAYF
Sbjct: 85  LPSALLFDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAYF 144

Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
           NKTGWP  APS E+ERK+F+ASLHK+KTELFM LIEKKLLPLRPGVAKL+DQAL +GV V
Sbjct: 145 NKTGWPANAPSGEQERKEFVASLHKQKTELFMALIEKKLLPLRPGVAKLVDQALTQGVNV 204

Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           AVCSTSNE AV+AIVSFLLGPERAEKIQIFAGDVV RKKPDP
Sbjct: 205 AVCSTSNENAVSAIVSFLLGPERAEKIQIFAGDVVHRKKPDP 246

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51970096|dbj|BAD43740.1| unknown protein [Arabidopsis thaliana]

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 171/196 (87%), Gaps = 7/196 (3%)

Query: 49  RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
           +L  + ++  A PM   S R+V VTCSAS     LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41  KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100

Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
           DTFKE +L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKEGDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160

Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
           KTELFMVLIEKKLLPLRPGVAKL+DQAL  GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220

Query: 222 IQIFAGDVVPRKKPDP 237
           I+IFAGDVVP+KKPDP
Sbjct: 221 IKIFAGDVVPKKKPDP 236

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4678346|emb|CAB41156.1| putative protein [Arabidopsis thaliana]

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 159/197 (80%), Positives = 172/197 (87%), Gaps = 7/197 (3%)

Query: 49  RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
           +L  + ++  A PM   S R+V VTCSAS     LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41  KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100

Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
           DTFKE++L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKERDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160

Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
           KTELFMVLIEKKLLPLRPGVAKL+DQAL  GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220

Query: 222 IQIFAGDVVPRKKPDPV 238
           I+IFAGDVVP+KKPDP 
Sbjct: 221 IKIFAGDVVPKKKPDPA 237

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	262
TAIR|locus:2101165	319	AT3G48420 [Arabidopsis thalian	0.683	0.561	0.849	4.2e-79
TAIR|locus:2140050	316	AT4G39970 [Arabidopsis thalian	0.694	0.575	0.345	3.3e-24
TAIR|locus:2153348	372	AT5G45170 "AT5G45170" [Arabido	0.549	0.387	0.337	8.6e-15
TIGR_CMR|GSU_1839	228	GSU_1839 "hydrolase, haloacid	0.541	0.622	0.294	6.6e-05
UNIPROTKB|Q88A30	272	PSPTO_0567 "Phosphoglycolate p	0.568	0.547	0.281	0.00095

TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)]

 Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
 Identities = 158/186 (84%), Positives = 167/186 (89%)

Query:    59 ANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV 111
             A PM   S R+V VTCSAS     LPSALLFDCDGVLVDTEKDGHRISFNDTFKE++L V
Sbjct:    51 AKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFNDTFKERDLNV 110

Query:   112 TWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
             TWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+KTELFMVLIE
Sbjct:   111 TWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQKTELFMVLIE 170

Query:   172 KKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP 231
             KKLLPLRPGVAKL+DQAL  GVKVAVCSTSNEKAV+AIVS LLGPERAEKI+IFAGDVVP
Sbjct:   171 KKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIKIFAGDVVP 230

Query:   232 RKKPDP 237
             +KKPDP
Sbjct:   231 KKKPDP 236

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2140050 AT4G39970 [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 69/200 (34%), Positives = 109/200 (54%)

Query:    55 RTSSANPMSMRNVRVTCSASVLPS--ALLFDCDGVLVDTEKDGHRISFNDTFKEKEL--- 109
             R  S +  S   V    SA  L S  AL+FDCDGV++++E + HR ++ND F   ++   
Sbjct:    39 RFKSRSVYSKSRVSSPVSALPLRSLEALIFDCDGVILESE-NLHRQAYNDAFSHFDVRCP 97

Query:   110 -----GVTWDVDLYGELLK-IGGGKERMTAYFNKTGWP-----EKAPSDEEERKQFIASL 158
                   + W ++ Y +    +GGGK +M  YF + GWP     +  P ++++R + I +L
Sbjct:    98 PSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSPPQNDDDRAKLIDTL 157

Query:   159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER 218
                KTE +  +I+   +  RPGV +L+D+A   G K+AVCS + + +V   +  L+  ER
Sbjct:   158 QDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVILCLENLIDIER 217

Query:   219 AEKIQIF-AGDVVPRKKPDP 237
              + +  F AGD V  KKPDP
Sbjct:   218 FQGLDCFLAGDDVKEKKPDP 237

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2153348 AT5G45170 "AT5G45170" [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 8.6e-15, P = 8.6e-15
 Identities = 53/157 (33%), Positives = 83/157 (52%)

Query:    79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELG-VTWDVDLYGELLKIGGGKER--MTAYF 135
             A++ + D V++DT    +R +FN  F++  L    W   +Y +LL+ G   E   +  YF
Sbjct:    80 AVILEVDRVMIDTWSS-NRQAFNVAFQKLGLDCANWPEPVYSDLLRKGAADEEKMLLLYF 138

Query:   136 NKTGWPEKAPSDEEERKQFIAS-LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
             N+ GWP   P+ E  +  F+ S L ++K  +   LI K L PLR GV + ID A  + V 
Sbjct:   139 NQIGWPSSLPTSE--KASFVKSVLREKKNAMDEFLISKSL-PLRSGVQEFIDNAYAEKVP 195

Query:   195 VAVCST---SNEKAVTAIVSFLLGPERAEKIQIFAGD 228
             VA+ +    S +K   +IV  +LG ER   +++  GD
Sbjct:   196 VAIVTAYCKSGDKVALSIVE-MLGQERLPNVKVI-GD 230

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0015979 "photosynthesis" evidence=RCA

TIGR_CMR|GSU_1839 GSU_1839 "hydrolase, haloacid dehalogenase-like family" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 115 (45.5 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 48/163 (29%), Positives = 77/163 (47%)

Query:    78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD--VDLYGELLKIG-GGKERMTAY 134
             SA++FD DG++VDTE   +R +F    +    G +W+  VD+Y     +G   ++     
Sbjct:     3 SAVIFDFDGIIVDTEPLHYR-AFQAILEPIGFGYSWEAYVDVY-----MGYDDRDAFREA 56

Query:   135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
             F   G      +D E+R+  +  L  RK   F  +I   + P  PGV +LI + ++    
Sbjct:    57 FRVRG------ADLEDRE--LEGLIARKAAAFQEIIASGVTPY-PGVVELI-RNIKANHP 106

Query:   195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
             VA+CS +    +  I+  L G      + + A D V   KPDP
Sbjct:   107 VALCSGALRSDILPILEGL-GLSGIFDVMVTA-DEVSASKPDP 147

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

UNIPROTKB|Q88A30 PSPTO_0567 "Phosphoglycolate phosphatase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 107 (42.7 bits), Expect = 0.00095, P = 0.00095
 Identities = 49/174 (28%), Positives = 80/174 (45%)

Query:    73 ASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMT 132
             A  LP  ++FD DG LVD+  D              L V  D  L  EL +   G E + 
Sbjct:     9 AGKLPKLIMFDLDGTLVDSVPD--------------LAVAVDTML-AELGRPTAGLESVR 53

Query:   133 AYFNKTGWP---EKAPSDEEERKQFIASLHKRKTELFM-VLIEK-KLLPLRPGVAKLIDQ 187
             A+    G P    +A ++  +      +L +R  ++FM    EK +   + PGV + +  
Sbjct:    54 AWVGN-GAPVLVRRALANNLDHSGVDEALAERGLDIFMRAYAEKHEFTVVYPGVRETLKW 112

Query:   188 ALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPVKI 240
               + GV++A+ +   E+ V  ++  + LG  R  +  I  GD +P+KKPDP  +
Sbjct:   113 LQKMGVEMALITNKPERFVAPLLDEMKLG--RFFR-WIIGGDTMPQKKPDPAAL 163


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      262       220   0.00094  112 3  11 22  0.39    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  169 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.17u 0.12s 19.29t   Elapsed:  00:00:01
  Total cpu time:  19.17u 0.12s 19.29t   Elapsed:  00:00:01
  Start:  Sat May 11 01:35:04 2013   End:  Sat May 11 01:35:05 2013

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	262
PLN02779	286	PLN02779, PLN02779, haloacid dehalogenase-like hyd	1e-108
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	2e-17
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	1e-15
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	9e-13
TIGR02009	185	TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f	7e-11
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	2e-10
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	4e-09
TIGR01990	185	TIGR01990, bPGM, beta-phosphoglucomutase	4e-07
PLN02919	1057	PLN02919, PLN02919, haloacid dehalogenase-like hyd	6e-04
TIGR01549	162	TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup	0.001
PRK13222	226	PRK13222, PRK13222, phosphoglycolate phosphatase;	0.001

>gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein

 Score =  315 bits (808), Expect = e-108
 Identities = 125/202 (61%), Positives = 145/202 (71%), Gaps = 5/202 (2%)

Query: 41  SSSSFLGSRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISF 100
           SSS+ L S                     + SAS LP ALLFDCDGVLV+TE+DGHR++F
Sbjct: 4   SSSARLASASRTRAGRRRRRRSRSTARVASASASALPEALLFDCDGVLVETERDGHRVAF 63

Query: 101 NDTFKEKEL-GVTWDVDLYGELLKIGGGKERMTAYFNKTGWP----EKAPSDEEERKQFI 155
           ND FKE  L  V WDV+LY ELL IGGGKERMT YFN+ GWP    EKAP DEEERK+ +
Sbjct: 64  NDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKDEEERKELV 123

Query: 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG 215
            SLH RKTELF  LIE   LPLRPGV +L+D+AL  G+KVAVCSTSNEKAV+ IV+ LLG
Sbjct: 124 DSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLG 183

Query: 216 PERAEKIQIFAGDVVPRKKPDP 237
           PERA+ + +FAGD VP+KKPDP
Sbjct: 184 PERAQGLDVFAGDDVPKKKPDP 205

Length = 286

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 78.2 bits (193), Expect = 2e-17
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 17/159 (10%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A++FD DG LVD+E   H  ++ +    KE G+    +   EL   GGG  R+     K 
Sbjct: 4   AVIFDMDGTLVDSE-PLHARAWLEAL--KEYGIEISDEEIREL--HGGGIARIIDLLRKL 58

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
               + P+D  E ++          E   + +E   L   PGV +L++Q   +G+ +AV 
Sbjct: 59  -AAGEDPADLAELER-------LLYEAEALELEG--LKPIPGVVELLEQLKARGIPLAVA 108

Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           S+S  +A   +++ L   +  + I + A D V R KP P
Sbjct: 109 SSSPRRAAERVLARLGLLDYFDVI-VTADD-VARGKPAP 145

Length = 221

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 72.1 bits (177), Expect = 1e-15
 Identities = 37/159 (23%), Positives = 57/159 (35%), Gaps = 22/159 (13%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DGVLVDT                E  +    +L    +        +     + 
Sbjct: 1   AVLFDLDGVLVDTAHAIA-----KLVDRAEFPLV-PDELGVSEV------GSLELALRRW 48

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
                     E+ +           +LF   +EK+ L   PGV  L++    +G K+A+ 
Sbjct: 49  KAKYGRTMSAEDAQLLY-------KQLFYEALEKEGLKPLPGVRALLEALRARGKKLALL 101

Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           + S      A +   LG      + I + DV    KPDP
Sbjct: 102 TNSP--RADAKLVLELGLRALFDVVIDSSDVG-LGKPDP 137

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 65.6 bits (160), Expect = 9e-13
 Identities = 41/160 (25%), Positives = 62/160 (38%), Gaps = 18/160 (11%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DG LVD+  +    +FN    E  L     +D       IG G + +       
Sbjct: 6   AILFDLDGTLVDSA-EDILRAFNAALAELGLP---PLDEEEIRQLIGLGLDELIERLLGE 61

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
                  +DEE   + +  L +     +    E     L PGV +L+      G K+ + 
Sbjct: 62  -------ADEEAAAELVERLREEFLTAYA---ELLESRLFPGVKELLAALKSAGYKLGIV 111

Query: 199 STSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDP 237
           +   E+ +  ++  L L         I  GD VP  KPDP
Sbjct: 112 TNKPERELDILLKALGLADYFDV---IVGGDDVPPPKPDP 148

Length = 220

>gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase

 Score = 59.3 bits (144), Expect = 7e-11
 Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 24/165 (14%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
             A++FD DGV+ DT    H  ++     +   G+++D   Y E LK G  +E +     
Sbjct: 1   YKAVIFDMDGVITDTAP-LHAQAWKHIAAK--YGISFDKQ-YNESLK-GLSREDILRAIL 55

Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
           K           EE  Q    L +RK EL+  L+    + + PG+  L+ +   KG+ V 
Sbjct: 56  K---LRGDGLSLEEIHQ----LAERKNELYRELLRLTGVAVLPGIRNLLKRLKAKGIAVG 108

Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKPDP 237
           + S+S           +L   +      F        V   KP P
Sbjct: 109 LGSSS------KNAPRIL--AKLGLRDYFDAIVDASEVKNGKPHP 145

This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 58.1 bits (140), Expect = 2e-10
 Identities = 31/162 (19%), Positives = 53/162 (32%), Gaps = 14/162 (8%)

Query: 79  ALLFDCDGVLVDTEKD-GHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
           A++FD DG L D E       +  +      + +                KE       +
Sbjct: 3   AVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVI-------AAGENLTKEGREELVRR 55

Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
                 A  +  E      +      +L ++ +     PL PG  + + +  E G+K+A+
Sbjct: 56  LLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAI 115

Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPRKKPDP 237
            +  N     AI   L   +      + A     V   KPDP
Sbjct: 116 LTGDNRLTANAIARLLGLFDAL----VSADLYGLVGVGKPDP 153

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 54.3 bits (131), Expect = 4e-09
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 22/158 (13%)

Query: 80  LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTG 139
           ++FD DG L+D +      +  D   E  LG+    +   E     GG     A      
Sbjct: 1   IIFDLDGTLIDFD-PVIFEALRDLAAE-RLGLDISAEELREA----GGLPFDEAL---AD 51

Query: 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCS 199
              + P D +E             E  +    +  L   P V +L+ +   KGVK+ + S
Sbjct: 52  LLREHPIDPDE-----------ILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILS 100

Query: 200 TSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
             + +AV  ++  L   +  +   +F  D V  +KPDP
Sbjct: 101 NGSREAVERLLEKLGLLDLFD--AVFTSDDVGARKPDP 136

Length = 176

>gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 35/169 (20%)

Query: 79  ALLFDCDGVLVDTEK----DGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY 134
           A++FD DGV+ DT +        ++        ELG+ +D +   E LK    +E +   
Sbjct: 1   AVIFDLDGVITDTAEYHYLAWKHLA-------DELGIPFDEEF-NESLKGVSREESLERI 52

Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP--LRPGVAKLIDQALEKG 192
            +  G        EEE+++    L +RK + ++ L+ K+L P  + PG+  L+    +  
Sbjct: 53  LDLGG----KKYSEEEKEE----LAERKNDYYVELL-KELTPADVLPGIKSLLADLKKNN 103

Query: 193 VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK----KPDP 237
           +K+A+ S S           +L  E+ E I  F   V P +    KPDP
Sbjct: 104 IKIALASASKN------APTIL--EKLELIDYFDAIVDPAELKKGKPDP 144

This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185

>gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein

 Score = 40.6 bits (95), Expect = 6e-04
 Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 33/141 (23%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLY------GELLKIGGGKERM 131
           SA+LFD DGVL ++E +  R +  D F   E+GV   V+ +      GE   +GG     
Sbjct: 76  SAVLFDMDGVLCNSE-EPSRRAAVDVF--AEMGVEVTVEDFVPFMGTGEANFLGG----- 127

Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLR----PGVAKLIDQ 187
               +  G     P   ++R              F + +EK   P      PG  +LI Q
Sbjct: 128 --VASVKGVKGFDPDAAKKR-------------FFEIYLEKYAKPNSGIGFPGALELITQ 172

Query: 188 ALEKGVKVAVCSTSNEKAVTA 208
              KG+KVAV S+++   V A
Sbjct: 173 CKNKGLKVAVASSADRIKVDA 193

Length = 1057

>gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 32/160 (20%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DG LVD  K   R +F  TF+E       +   +  L  + G  E +       
Sbjct: 1   AILFDIDGTLVDI-KFAIRRAFAQTFEE----FGLNPAAFKRLKALRGLAEEL------- 48

Query: 139 GWPEKAPS-DEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
                A    EE +        +                  PG A L+ +  E G+K+ +
Sbjct: 49  -LWRIATEALEELQGHIGYDAEE---------------AYIPGAADLLPRLKEAGIKLGI 92

Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            S  + +A   ++      +     ++  G      KP+P
Sbjct: 93  ISNGSLRAQKLLLRKHGLGDY---FELILGSDEIGSKPEP 129

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162

>gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional

 Score = 38.6 bits (91), Expect = 0.001
 Identities = 37/173 (21%), Positives = 58/173 (33%), Gaps = 42/173 (24%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV-------TWDVDLYGELLKIGGGKERM 131
           A+ FD DG LVD+  D    + N       L         TW          +G G + +
Sbjct: 8   AVAFDLDGTLVDSAPDLAA-AVNAALAALGLPPAGEERVRTW----------VGNGADVL 56

Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKR-------KTELFMVLIEKKLLPLRPGVAKL 184
                   W  + P DEE  ++      +         + L+            PGV + 
Sbjct: 57  VE--RALTWAGREP-DEELLEKLRELFDRHYAENVAGGSRLY------------PGVKET 101

Query: 185 IDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           +      G  +AV +      V  ++  L   +      +  GD +P KKPDP
Sbjct: 102 LAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS--VVIGGDSLPNKKPDP 152

Length = 226

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	262
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.95
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.94
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.94
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.94
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.94
PLN02575	381	haloacid dehalogenase-like hydrolase	99.93
PRK13288	214	pyrophosphatase PpaX; Provisional	99.93
COG0546	220	Gph Predicted phosphatases [General function predi	99.93
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.93
PRK11587	218	putative phosphatase; Provisional	99.92
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.92
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.92
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.92
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.92
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.91
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.91
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.91
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.9
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.9
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.9
PLN02940	382	riboflavin kinase	99.9
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.9
PRK09449	224	dUMP phosphatase; Provisional	99.89
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.89
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.89
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.89
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.89
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.88
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.88
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.88
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.87
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.87
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.87
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.86
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.86
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.85
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.85
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.84
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.84
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.83
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.82
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.81
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.8
PLN02811	220	hydrolase	99.79
PHA02597	197	30.2 hypothetical protein; Provisional	99.73
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.7
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.7
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.6
PLN02954	224	phosphoserine phosphatase	99.59
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.59
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.58
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.57
PRK06769	173	hypothetical protein; Validated	99.55
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.54
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.54
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.53
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.5
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.49
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.49
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.48
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.44
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.37
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.35
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.31
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.28
PRK11590	211	hypothetical protein; Provisional	99.25
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.25
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.24
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.24
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	99.24
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.23
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.22
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.18
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.18
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.16
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.14
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.14
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.11
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.08
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.07
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.03
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.02
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.01
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	98.98
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	98.94
PRK08238	479	hypothetical protein; Validated	98.93
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	98.89
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.87
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	98.85
PHA02530	300	pseT polynucleotide kinase; Provisional	98.85
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	98.81
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.71
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.68
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	98.65
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	98.57
COG4229	229	Predicted enolase-phosphatase [Energy production a	98.51
PLN02645	311	phosphoglycolate phosphatase	98.51
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.5
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	98.49
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.47
PTZ00445	219	p36-lilke protein; Provisional	98.46
PRK10444	248	UMP phosphatase; Provisional	98.4
COG4359	220	Uncharacterized conserved protein [Function unknow	98.34
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	98.24
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.16
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.08
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.04
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.01
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.99
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	97.96
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	97.96
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.95
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.94
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.93
COG0241	181	HisB Histidinol phosphatase and related phosphatas	97.87
PRK10513	270	sugar phosphate phosphatase; Provisional	97.82
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	97.77
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	97.69
PRK10976	266	putative hydrolase; Provisional	97.68
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.66
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.65
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	97.59
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.56
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.56
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	97.56
COG4996	164	Predicted phosphatase [General function prediction	97.51
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	97.46
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.4
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	97.35
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.3
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	97.24
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.24
PTZ00174	247	phosphomannomutase; Provisional	97.23
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	97.23
PLN02887	580	hydrolase family protein	97.22
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	97.14
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	97.14
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.13
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	97.13
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	97.1
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	97.06
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	97.03
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	96.99
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	96.69
PLN02645	311	phosphoglycolate phosphatase	96.42
PLN02177	497	glycerol-3-phosphate acyltransferase	96.32
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	96.19
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	96.0
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	95.94
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	95.92
PRK10671	834	copA copper exporting ATPase; Provisional	95.82
COG2503	274	Predicted secreted acid phosphatase [General funct	95.75
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	95.72
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	95.66
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	95.58
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	95.5
PLN02499	498	glycerol-3-phosphate acyltransferase	95.11
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	95.06
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	94.57
PLN02580	384	trehalose-phosphatase	94.45
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	94.3
PLN02423	245	phosphomannomutase	94.2
PRK10444	248	UMP phosphatase; Provisional	94.08
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	93.98
PLN03017	366	trehalose-phosphatase	93.73
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	93.69
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	93.5
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	93.49
PLN02151	354	trehalose-phosphatase	93.45
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	93.24
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	92.78
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	92.7
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	92.41
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	92.35
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	92.27
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	92.16
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	92.12
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	92.11
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	92.08
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	91.87
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	90.66
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	90.56
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	90.49
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	90.25
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	90.07
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	90.01
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	89.93
PRK14010	673	potassium-transporting ATPase subunit B; Provision	89.64
COG0731	296	Fe-S oxidoreductases [Energy production and conver	89.5
PRK01122	679	potassium-transporting ATPase subunit B; Provision	89.34
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	88.76
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	88.57
COG5663	194	Uncharacterized conserved protein [Function unknow	88.51
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	87.75
COG4030	315	Uncharacterized protein conserved in archaea [Func	87.57
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	86.79
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	86.12
KOG4549	144	consensus Magnesium-dependent phosphatase [General	85.74
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	85.35
COG4087	152	Soluble P-type ATPase [General function prediction	84.51
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	84.33
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	84.17
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	83.4
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	83.24
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	83.0
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	82.65
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	81.35
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	80.41

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.95  E-value=7.7e-27  Score=200.22  Aligned_cols=183  Identities=65%  Similarity=1.068  Sum_probs=137.4

Q ss_pred             CCCCcEEEEecCccccccC-cchHHHHHHHHHHHccC-CCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCC----CCCCCc
Q 024806           74 SVLPSALLFDCDGVLVDTE-KDGHRISFNDTFKEKEL-GVTWDVDLYGELLKIGGGKERMTAYFNKTGWP----EKAPSD  147 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~-~~~~~~a~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  147 (262)
                      ...+++|||||||||+|+. .. +..+|.++++++|+ ...++.+.+..+..+|.+...+...+...+|+    ...+..
T Consensus        37 ~~~~k~VIFDlDGTLvDS~~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (286)
T PLN02779         37 SALPEALLFDCDGVLVETERDG-HRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKD  115 (286)
T ss_pred             ccCCcEEEEeCceeEEccccHH-HHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCcc
Confidence            3457999999999999999 85 88899999999998 43445555544434666666666666555555    222222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeC
Q 024806          148 EEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s  227 (262)
                      ++..++..+.+.+.+.+.|.+.+....+.++||+.++|+.|+++|++++|+||+....+..+++.+++..+|+.+.++++
T Consensus       116 ~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~  195 (286)
T PLN02779        116 EEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAG  195 (286)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEec
Confidence            33334445555555556666665444468999999999999999999999999999999999998755555553235588


Q ss_pred             CCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          228 DVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       228 ~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++++..||+|++|     ..+++++|++|++|+||
T Consensus       196 ~~~~~~KP~p~~~-----~~a~~~~~~~p~~~l~I  225 (286)
T PLN02779        196 DDVPKKKPDPDIY-----NLAAETLGVDPSRCVVV  225 (286)
T ss_pred             cccCCCCCCHHHH-----HHHHHHhCcChHHEEEE
Confidence            8889999999999     88999999999999986

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.94  E-value=2e-26  Score=190.59  Aligned_cols=164  Identities=28%  Similarity=0.375  Sum_probs=123.1

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHH-hcCCCCCCCCcHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  154 (262)
                      ++++|||||||||+||++. +.++|.++++++|+..+  .+.....  .|.........+. ..+...  +.....    
T Consensus         1 ~~~avIFD~DGvLvDse~~-~~~a~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~--~~~~~~----   69 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPL-HARAWLEALKEYGIEIS--DEEIREL--HGGGIARIIDLLRKLAAGED--PADLAE----   69 (221)
T ss_pred             CCcEEEEcCCCCcCcchHH-HHHHHHHHHHHcCCCCC--HHHHHHH--HCCChHHHHHHHHHHhcCCc--ccCHHH----
Confidence            4799999999999999996 99999999999988764  3444444  4444333333322 221110  001111    


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      .+....   +.+...  .....++||+.++|+.|+++|++++++||+.+..++..|+.+|+.++|+  .+++++++...|
T Consensus        70 ~~~~~~---~~~~~~--~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~--~~v~~~dv~~~K  142 (221)
T COG0637          70 LERLLY---EAEALE--LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD--VIVTADDVARGK  142 (221)
T ss_pred             HHHHHH---HHHHhh--hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc--hhccHHHHhcCC
Confidence            111111   111111  1247899999999999999999999999999999999999999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     ..++++||++|++||+|
T Consensus       143 P~Pd~y-----L~Aa~~Lgv~P~~Cvvi  165 (221)
T COG0637         143 PAPDIY-----LLAAERLGVDPEECVVV  165 (221)
T ss_pred             CCCHHH-----HHHHHHcCCChHHeEEE
Confidence            999999     88999999999999976

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.94  E-value=6.5e-26  Score=191.00  Aligned_cols=167  Identities=22%  Similarity=0.280  Sum_probs=126.7

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCC--CCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELG--VTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEER  151 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (262)
                      ..++|+|||||||||+|+... +..+|.++++++|+.  .+.+.+.+.+. ..|.+...+...+...        .....
T Consensus        19 ~~~~k~viFDlDGTLiDs~~~-~~~a~~~~~~~~g~~~g~~~~~~~~~~~-~~G~~~~~~~~~~~~~--------~~~~~   88 (248)
T PLN02770         19 LAPLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVEN-IAGKHNEDIALGLFPD--------DLERG   88 (248)
T ss_pred             cCccCEEEEcCCCccCcCHHH-HHHHHHHHHHHhccccCCCCCHHHHHHH-cCCCCHHHHHHHHcCc--------chhhH
Confidence            456899999999999999996 889999999998764  23333433322 2455555444332111        01111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCC
Q 024806          152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP  231 (262)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~  231 (262)
                      .    .+...+.+.|.+.... ...++||+.++|+.|+++|++++|+||+.+..++..++++|+.+||+  .|+++++++
T Consensus        89 ~----~~~~~~~~~y~~~~~~-~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd--~iv~~~~~~  161 (248)
T PLN02770         89 L----KFTDDKEALFRKLASE-QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ--AVIIGSECE  161 (248)
T ss_pred             H----HHHHHHHHHHHHHHHh-cCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc--EEEecCcCC
Confidence            1    1222233344443332 47899999999999999999999999999999999999999999999  899999999


Q ss_pred             CCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          232 RKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       232 ~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ..||+|++|     ..+++++|++|++|+||
T Consensus       162 ~~KP~p~~~-----~~a~~~~~~~~~~~l~v  187 (248)
T PLN02770        162 HAKPHPDPY-----LKALEVLKVSKDHTFVF  187 (248)
T ss_pred             CCCCChHHH-----HHHHHHhCCChhHEEEE
Confidence            999999999     88999999999999986

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.94  E-value=1.9e-25  Score=186.08  Aligned_cols=165  Identities=21%  Similarity=0.306  Sum_probs=126.4

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      .|+|+|||||||||+|+... +..+|+++++++|.+. .+.+.+...  .|.+...+......    .   ..+...++.
T Consensus        10 ~~~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~-~~~~~~~~~--~g~~~~~~~~~~~~----~---~~~~~~~~~   78 (229)
T PRK13226         10 RFPRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRAP-ITLAQLRPV--VSKGARAMLAVAFP----E---LDAAARDAL   78 (229)
T ss_pred             ccCCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCCC-CCHHHHHHH--hhhHHHHHHHHHhc----c---CChHHHHHH
Confidence            46799999999999999996 8899999999999864 344555544  44444444333211    0   122222333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      .+.+.    +.|.+.... ..+++||+.++|+.|+++|++++|+||+....+...++++++.++|+  .++++++++..|
T Consensus        79 ~~~~~----~~~~~~~~~-~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~K  151 (229)
T PRK13226         79 IPEFL----QRYEALIGT-QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA--VLIGGDTLAERK  151 (229)
T ss_pred             HHHHH----HHHHHhhhh-cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc--EEEecCcCCCCC
Confidence            33333    333333222 36899999999999999999999999999999999999999999999  888999889999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     ..+++++|++|++|+||
T Consensus       152 P~p~~~-----~~~~~~l~~~p~~~l~I  174 (229)
T PRK13226        152 PHPLPL-----LVAAERIGVAPTDCVYV  174 (229)
T ss_pred             CCHHHH-----HHHHHHhCCChhhEEEe
Confidence            999999     88999999999999986

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.94  E-value=2.5e-25  Score=188.11  Aligned_cols=167  Identities=18%  Similarity=0.221  Sum_probs=126.4

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      ..+|+|||||||||+|+....+..+|.++++++|+..+. .+.+...  .|.+.......+..  +.    ...+...++
T Consensus        22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~-~e~~~~~--~G~~~~~~~~~l~~--~~----~~~~~~~~l   92 (260)
T PLN03243         22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPP-AFLLKRA--EGMKNEQAISEVLC--WS----RDFLQMKRL   92 (260)
T ss_pred             CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCH-HHHHHHh--cCCCHHHHHHHHhc--cC----CCHHHHHHH
Confidence            368999999999999997544778999999999987542 2333333  66666555544321  11    112222222


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      ...    +...+.. .......++||+.++|+.|+++|++++|+||+....++..++++|+.+||+  .|+++++++..|
T Consensus        93 ~~~----~~~~~~~-~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd--~ii~~~d~~~~K  165 (260)
T PLN03243         93 AIR----KEDLYEY-MQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS--VVLAAEDVYRGK  165 (260)
T ss_pred             HHH----HHHHHHH-HHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc--EEEecccCCCCC
Confidence            222    2222221 122346789999999999999999999999999999999999999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     ..+++++|++|++|+||
T Consensus       166 P~Pe~~-----~~a~~~l~~~p~~~l~I  188 (260)
T PLN03243        166 PDPEMF-----MYAAERLGFIPERCIVF  188 (260)
T ss_pred             CCHHHH-----HHHHHHhCCChHHeEEE
Confidence            999999     88999999999999986

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.93  E-value=6.4e-25  Score=192.43  Aligned_cols=166  Identities=17%  Similarity=0.210  Sum_probs=129.4

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (262)
                      .+++|||||||||+|+....+..+|.++++++|+... ..+.+...  .|.+.......+....      ..+...+   
T Consensus       130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~-~~e~~~~~--~G~~~~~~l~~ll~~~------~~~~~~e---  197 (381)
T PLN02575        130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPP-PAFILRRV--EGMKNEQAISEVLCWS------RDPAELR---  197 (381)
T ss_pred             CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCC-HHHHHHHh--cCCCHHHHHHHHhhcc------CCHHHHH---
Confidence            7899999999999999875466799999999998754 23334443  6766666555432211      1122222   


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCC
Q 024806          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (262)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KP  235 (262)
                       .+...+.+.|.+... ....++||+.++|+.|+++|++++|+||+.+..++.+++++|+.+||+  .|+++++++..||
T Consensus       198 -~l~~~~~~~y~~~~~-~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd--~Iv~sddv~~~KP  273 (381)
T PLN02575        198 -RMATRKEEIYQALQG-GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS--VIVAAEDVYRGKP  273 (381)
T ss_pred             -HHHHHHHHHHHHHhc-cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce--EEEecCcCCCCCC
Confidence             333333444544433 236899999999999999999999999999999999999999999999  8999999999999


Q ss_pred             ChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          236 DPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       236 dp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|++|     ..+++++|+.|++|+||
T Consensus       274 ~Peif-----l~A~~~lgl~Peecl~I  295 (381)
T PLN02575        274 DPEMF-----IYAAQLLNFIPERCIVF  295 (381)
T ss_pred             CHHHH-----HHHHHHcCCCcccEEEE
Confidence            99999     88999999999999986

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.93  E-value=1.2e-24  Score=179.40  Aligned_cols=161  Identities=20%  Similarity=0.212  Sum_probs=123.7

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |++++||||+||||+|+... +..+|.+++++++... .+.+.+...  .|.+.......+           .+...+++
T Consensus         1 m~~~~viFD~DGTL~ds~~~-~~~a~~~~~~~~~~~~-~~~~~~~~~--~G~~~~~~~~~~-----------~~~~~~~~   65 (214)
T PRK13288          1 MKINTVLFDLDGTLINTNEL-IISSFLHTLKTYYPNQ-YKREDVLPF--IGPSLHDTFSKI-----------DESKVEEM   65 (214)
T ss_pred             CCccEEEEeCCCcCccCHHH-HHHHHHHHHHHhCCCC-CCHHHHHHH--hCcCHHHHHHhc-----------CHHHHHHH
Confidence            46899999999999999996 8899999999987653 234445444  455544333321           11122222


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      ...    +.+.+..... ....++||+.++|+.|+++|++++|+||+....+...++.+|+.++|+  .++++++++..|
T Consensus        66 ~~~----~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~K  138 (214)
T PRK13288         66 ITT----YREFNHEHHD-ELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD--VVITLDDVEHAK  138 (214)
T ss_pred             HHH----HHHHHHHhhh-hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee--EEEecCcCCCCC
Confidence            222    2222222222 236799999999999999999999999999999999999999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     ..+++++|++|++++||
T Consensus       139 p~p~~~-----~~~~~~~~~~~~~~~~i  161 (214)
T PRK13288        139 PDPEPV-----LKALELLGAKPEEALMV  161 (214)
T ss_pred             CCcHHH-----HHHHHHcCCCHHHEEEE
Confidence            999999     88899999999999986

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.93  E-value=2.7e-24  Score=177.96  Aligned_cols=168  Identities=26%  Similarity=0.391  Sum_probs=131.4

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (262)
                      ++++++||||+||||+|+... +..+++.+++++|++. .+.+.+...  +|.+...+.......  .     ..+...+
T Consensus         1 ~~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--ig~~~~~~~~~~~~~--~-----~~~~~~~   69 (220)
T COG0546           1 MMMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP-LDEEEIRQL--IGLGLDELIERLLGE--A-----DEEAAAE   69 (220)
T ss_pred             CCCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC-CCHHHHHHH--hcCCHHHHHHHHhcc--c-----cchhHHH
Confidence            367999999999999999996 8889999999999884 345666665  677666655543211  0     1111113


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      ..+.+...+.+.+.+..   ...++||+.++|+.|+++|++++|+||.+...++.+++++|+.+||+  .++++++....
T Consensus        70 ~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~--~i~g~~~~~~~  144 (220)
T COG0546          70 LVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD--VIVGGDDVPPP  144 (220)
T ss_pred             HHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc--eEEcCCCCCCC
Confidence            34444444444443322   15799999999999999999999999999999999999999999999  88888888999


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|..+     ..+|+.+|++|++++||
T Consensus       145 KP~P~~l-----~~~~~~~~~~~~~~l~V  168 (220)
T COG0546         145 KPDPEPL-----LLLLEKLGLDPEEALMV  168 (220)
T ss_pred             CcCHHHH-----HHHHHHhCCChhheEEE
Confidence            9999999     78899999998899987

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.93  E-value=2.3e-24  Score=178.38  Aligned_cols=165  Identities=16%  Similarity=0.157  Sum_probs=126.7

Q ss_pred             CcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHHHHH
Q 024806           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQFI  155 (262)
Q Consensus        77 ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  155 (262)
                      +|+||||+||||+|+... +..+|.++++++|...+  .+.+.+. ..|.....+.+. +...+.      .....+++.
T Consensus         1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~~~--~~~~~~~-~~g~~~~~~~~~~~~~~~~------~~~~~~~~~   70 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLSPT--PEEVQSA-WMGQSKIEAIRALLALDGA------DEAEAQAAF   70 (220)
T ss_pred             CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCCCC--HHHHHHh-hcCCCHHHHHHHHHhccCC------CHHHHHHHH
Confidence            589999999999999996 88999999999888643  3444331 256655555443 333332      122222233


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC--CCcccceEEeCCCCCCC
Q 024806          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP--ERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~--~~f~~~~Iv~s~~~~~~  233 (262)
                      ..+    .+.+.+.+......++||+.++|+.|+++|++++|+||+....++..|+.+|+.  ++|+  .++++++++..
T Consensus        71 ~~~----~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~--~i~~~~~~~~~  144 (220)
T TIGR03351        71 ADF----EERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD--AVVCPSDVAAG  144 (220)
T ss_pred             HHH----HHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC--EEEcCCcCCCC
Confidence            333    333433333334689999999999999999999999999999999999999998  9999  89999999999


Q ss_pred             CCChHHHhhhhhhhhhhhcccC-CcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTH-AHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~-p~e~v~I  262 (262)
                      ||+|++|     ..+++++|+. |++|+||
T Consensus       145 KP~p~~~-----~~a~~~~~~~~~~~~~~i  169 (220)
T TIGR03351       145 RPAPDLI-----LRAMELTGVQDVQSVAVA  169 (220)
T ss_pred             CCCHHHH-----HHHHHHcCCCChhHeEEe
Confidence            9999999     8889999997 7999986

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK11587 putative phosphatase; Provisional

Probab=99.92  E-value=1.5e-24  Score=179.32  Aligned_cols=161  Identities=19%  Similarity=0.194  Sum_probs=118.2

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |++|+||||+||||+|+... +..+|+++++++|++.    ..+... ..|.+.....+.+.. ++      ..+.   .
T Consensus         1 M~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~----~~~~~~-~~g~~~~~~~~~~~~-~~------~~~~---~   64 (218)
T PRK11587          1 MRCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP----DEVLNF-IHGKQAITSLRHFMA-GA------SEAE---I   64 (218)
T ss_pred             CCCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH----HHHHHH-HcCCCHHHHHHHHhc-cC------CcHH---H
Confidence            46899999999999999996 8889999999999853    222222 245555554443321 11      1111   1


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      .+.+...  ..+.... .....++||+.++|+.|+++|++++|+||+....+...++..++ .+|+  .++++++++..|
T Consensus        65 ~~~~~~~--~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~--~i~~~~~~~~~K  138 (218)
T PRK11587         65 QAEFTRL--EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPE--VFVTAERVKRGK  138 (218)
T ss_pred             HHHHHHH--HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCcc--EEEEHHHhcCCC
Confidence            1222110  0111111 12468999999999999999999999999998888888888877 5677  788888888999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     ..+++++|+.|++|+||
T Consensus       139 P~p~~~-----~~~~~~~g~~p~~~l~i  161 (218)
T PRK11587        139 PEPDAY-----LLGAQLLGLAPQECVVV  161 (218)
T ss_pred             CCcHHH-----HHHHHHcCCCcccEEEE
Confidence            999999     88999999999999986

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.92  E-value=7.3e-24  Score=180.45  Aligned_cols=169  Identities=18%  Similarity=0.220  Sum_probs=121.5

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH----------H-HhcCCCC
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY----------F-NKTGWPE  142 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~  142 (262)
                      |+++|+||||+||||+|+....+..+|.++++++|++.+  .+.+...  .|.+.......          + ...+.+ 
T Consensus         1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~--~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~g~~-   75 (267)
T PRK13478          1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEIT--LEEARGP--MGLGKWDHIRALLKMPRVAARWQAVFGRL-   75 (267)
T ss_pred             CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCC--HHHHHHh--cCCCHHHHHHHHHhcHHHHHHHHHHhCCC-
Confidence            567999999999999999653246799999999987643  3444433  44443221111          1 111211 


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc-cc
Q 024806          143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EK  221 (262)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f-~~  221 (262)
                         .......++...+.    +.+.+... ....++||+.++|+.|+++|++++|+||+.+..+..+++.+++.++| + 
T Consensus        76 ---~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d-  146 (267)
T PRK13478         76 ---PTEADVDALYAAFE----PLQIAKLA-DYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPD-  146 (267)
T ss_pred             ---CCHHHHHHHHHHHH----HHHHHHHh-hcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCce-
Confidence               12222233333322    23333222 23689999999999999999999999999999999999999888885 6 


Q ss_pred             ceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccC-CcccccC
Q 024806          222 IQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTH-AHKNVLV  262 (262)
Q Consensus       222 ~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~-p~e~v~I  262 (262)
                       .|+++++++..||+|++|     ..+++++|+. |++|+||
T Consensus       147 -~i~~~~~~~~~KP~p~~~-----~~a~~~l~~~~~~e~l~I  182 (267)
T PRK13478        147 -HVVTTDDVPAGRPYPWMA-----LKNAIELGVYDVAACVKV  182 (267)
T ss_pred             -EEEcCCcCCCCCCChHHH-----HHHHHHcCCCCCcceEEE
Confidence             789999999999999999     8899999996 6899986

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.92  E-value=6.3e-24  Score=179.48  Aligned_cols=166  Identities=18%  Similarity=0.162  Sum_probs=120.6

Q ss_pred             CcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-----------HHhcCCCCCCC
Q 024806           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-----------FNKTGWPEKAP  145 (262)
Q Consensus        77 ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~  145 (262)
                      +|+||||+||||+|+....+..+|.++++++|...  +.+.+...  .|.+.......           ....+.+    
T Consensus         2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~--~~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~----   73 (253)
T TIGR01422         2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQI--TLEEARGP--MGLGKWDHIRALLKMPAVAERWRAKFGRL----   73 (253)
T ss_pred             ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCc--cHHHHHHh--cCccHHHHHHHHhcCHHHHHHHHHHhCCC----
Confidence            68999999999999965325679999999988754  34444433  44443222211           1112211    


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc-ccceE
Q 024806          146 SDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EKIQI  224 (262)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f-~~~~I  224 (262)
                      ..++...++...    +.+.+.+.... ...++||+.++|+.|+++|++++|+||++...++.+++.+|+.++| +  .|
T Consensus        74 ~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d--~i  146 (253)
T TIGR01422        74 PTEADIEAIYEA----FEPLQLAKLAE-YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPD--YN  146 (253)
T ss_pred             CCHHHHHHHHHH----HHHHHHHHHHh-cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCc--eE
Confidence            122222222222    22333332222 3789999999999999999999999999999999999999999996 7  89


Q ss_pred             EeCCCCCCCCCChHHHhhhhhhhhhhhcccC-CcccccC
Q 024806          225 FAGDVVPRKKPDPVKICSLTVDIVCNVLKTH-AHKNVLV  262 (262)
Q Consensus       225 v~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~-p~e~v~I  262 (262)
                      +++++++..||+|++|     ..+++++|+. |++|+||
T Consensus       147 i~~~~~~~~KP~p~~~-----~~a~~~l~~~~~~~~l~I  180 (253)
T TIGR01422       147 VTTDDVPAGRPAPWMA-----LKNAIELGVYDVAACVKV  180 (253)
T ss_pred             EccccCCCCCCCHHHH-----HHHHHHcCCCCchheEEE
Confidence            9999999999999999     8899999995 9999986

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.92  E-value=4.7e-24  Score=176.84  Aligned_cols=166  Identities=19%  Similarity=0.307  Sum_probs=125.2

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHH-hcCCCCCCCCcHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  153 (262)
                      .++++||||+||||+|+.+. +..++.++++++|+.... .+.+...  .|.........+. ..+|..  + .   ..+
T Consensus         5 ~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~~--~-~---~~~   74 (222)
T PRK10826          5 RQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISR-REELPDT--LGLRIDQVVDLWYARQPWNG--P-S---RQE   74 (222)
T ss_pred             ccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCCCCH-HHHHHHh--hCCCHHHHHHHHHHhcCCCC--C-C---HHH
Confidence            46899999999999999996 888999999999876432 2333333  4555444444332 222211  1 1   112


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      ....+.+    .+.+... ....++||+.++|+.|+++|++++|+||+....++.+++.+++.++|+  .++++++++..
T Consensus        75 ~~~~~~~----~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~  147 (222)
T PRK10826         75 VVQRIIA----RVISLIE-ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASAEKLPYS  147 (222)
T ss_pred             HHHHHHH----HHHHHHh-cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEcccCCCC
Confidence            2222222    2222222 236899999999999999999999999999999999999999999999  89999999999


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|++|     ..+++++|+.|++|++|
T Consensus       148 Kp~~~~~-----~~~~~~~~~~~~~~~~i  171 (222)
T PRK10826        148 KPHPEVY-----LNCAAKLGVDPLTCVAL  171 (222)
T ss_pred             CCCHHHH-----HHHHHHcCCCHHHeEEE
Confidence            9999999     88999999999999986

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.92  E-value=4.4e-24  Score=175.67  Aligned_cols=163  Identities=21%  Similarity=0.302  Sum_probs=123.7

Q ss_pred             EEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHHHHHHHH
Q 024806           80 LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQFIASL  158 (262)
Q Consensus        80 viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  158 (262)
                      ||||+||||+|+... +..+++++++++|... .+.+.+...  .|.+...+... +...+.+    .....    .+.+
T Consensus         1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~~----~~~~   68 (213)
T TIGR01449         1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLPP-ATLARVIGF--IGNGVPVLMERVLAWAGQE----PDAQR----VAEL   68 (213)
T ss_pred             CeecCCCccccCHHH-HHHHHHHHHHHCCCCC-CCHHHHHHH--hcccHHHHHHHHhhccccc----cChHH----HHHH
Confidence            699999999999986 7789999999998863 344555544  45554444333 3222211    12222    2233


Q ss_pred             HHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChH
Q 024806          159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPV  238 (262)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~  238 (262)
                      .+.+.+.|.+...+ ...++||+.++|+.|+++|++++|+||+....++.+++++|+.++|+  .++++++++..||+|+
T Consensus        69 ~~~~~~~~~~~~~~-~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~p~  145 (213)
T TIGR01449        69 RKLFDRHYEEVAGE-LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS--VLIGGDSLAQRKPHPD  145 (213)
T ss_pred             HHHHHHHHHHhccc-cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc--EEEecCCCCCCCCChH
Confidence            33333444443322 36899999999999999999999999999999999999999999999  8999999999999999


Q ss_pred             HHhhhhhhhhhhhcccCCcccccC
Q 024806          239 KICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       239 ~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|     ..+++++|++|++|+||
T Consensus       146 ~~-----~~~~~~~~~~~~~~~~i  164 (213)
T TIGR01449       146 PL-----LLAAERLGVAPQQMVYV  164 (213)
T ss_pred             HH-----HHHHHHcCCChhHeEEe
Confidence            99     88999999999999986

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.91  E-value=6.3e-24  Score=170.91  Aligned_cols=164  Identities=24%  Similarity=0.305  Sum_probs=123.0

Q ss_pred             CcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHHHHH
Q 024806           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQFI  155 (262)
Q Consensus        77 ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  155 (262)
                      +|+|+||+||||+|+... +..+|.++++++|...  +.+.....  .|......... +...+.    ........   
T Consensus         1 ~~~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~----~~~~~~~~---   68 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPL-HAQAWKHLADKYGIEF--DKQYNTSL--GGLSREDILRAILKLRKP----GLSLETIH---   68 (185)
T ss_pred             CCeEEEcCCCcccCChHH-HHHHHHHHHHHcCCCC--CHHHHHHc--CCCCHHHHHHHHHHhcCC----CCCHHHHH---
Confidence            589999999999999996 8889999999998764  32322222  44554444333 333211    11222222   


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCC
Q 024806          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (262)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KP  235 (262)
                       .+...+.+.|.+.+......++||+.++|+.|+++|++++|+||+  ..++.+++.+|+.++|+  .++++++++..||
T Consensus        69 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~--~v~~~~~~~~~kp  143 (185)
T TIGR02009        69 -QLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFD--AIVDADEVKEGKP  143 (185)
T ss_pred             -HHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCC--EeeehhhCCCCCC
Confidence             233333344544443334789999999999999999999999998  67899999999999999  8999999999999


Q ss_pred             ChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          236 DPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       236 dp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|++|     ..+++++|++|+++++|
T Consensus       144 ~~~~~-----~~~~~~~~~~~~~~v~I  165 (185)
T TIGR02009       144 HPETF-----LLAAELLGVSPNECVVF  165 (185)
T ss_pred             ChHHH-----HHHHHHcCCCHHHeEEE
Confidence            99999     88999999999999986

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.91  E-value=1.5e-23  Score=168.77  Aligned_cols=162  Identities=21%  Similarity=0.336  Sum_probs=120.7

Q ss_pred             EEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHH-HHHhcCCCCCCCCcHHHHHHHHHH
Q 024806           79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQFIAS  157 (262)
Q Consensus        79 ~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  157 (262)
                      +||||+||||+|+... +..+|.++++++|++.  +.+....+  .+.+...... .+.+.+.+    ..+....++.+.
T Consensus         1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~   71 (185)
T TIGR01990         1 AVIFDLDGVITDTAEY-HYLAWKALADELGIPF--DEEFNESL--KGVSREDSLERILDLGGKK----YSEEEKEELAER   71 (185)
T ss_pred             CeEEcCCCccccChHH-HHHHHHHHHHHcCCCC--CHHHHHHh--cCCChHHHHHHHHHhcCCC----CCHHHHHHHHHH
Confidence            5899999999999996 8889999999998864  33444333  4544444443 44444432    223333333333


Q ss_pred             HHHHHHHHHHHHHHh-cCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCC
Q 024806          158 LHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPD  236 (262)
Q Consensus       158 ~~~~~~~~~~~~~~~-~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPd  236 (262)
                      +.    +.|.+.+.. ....++||+.++|+.|+++|++++|+||+.  .....++++++.++|+  .++++++++..||+
T Consensus        72 ~~----~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~  143 (185)
T TIGR01990        72 KN----DYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFD--AIVDPAEIKKGKPD  143 (185)
T ss_pred             HH----HHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCc--EEEehhhcCCCCCC
Confidence            33    333333221 124789999999999999999999999975  3567899999999999  89999999999999


Q ss_pred             hHHHhhhhhhhhhhhcccCCcccccC
Q 024806          237 PVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       237 p~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |++|     ..+++++|++|++||||
T Consensus       144 p~~~-----~~~~~~~~~~~~~~v~v  164 (185)
T TIGR01990       144 PEIF-----LAAAEGLGVSPSECIGI  164 (185)
T ss_pred             hHHH-----HHHHHHcCCCHHHeEEE
Confidence            9999     88999999999999986

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.91  E-value=9e-24  Score=170.54  Aligned_cols=163  Identities=20%  Similarity=0.223  Sum_probs=121.0

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHH-HHHhcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  152 (262)
                      |..+++||||+||||+|+... +..+|.++++++|...  +.+.....  .|.....+.. .+...+.+    ...+   
T Consensus         2 ~~~~~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~---   69 (188)
T PRK10725          2 YDRYAGLIFDMDGTILDTEPT-HRKAWREVLGRYGLQF--DEQAMVAL--NGSPTWRIAQAIIELNQAD----LDPH---   69 (188)
T ss_pred             CCcceEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCC--CHHHHHHh--cCCCHHHHHHHHHHHhCCC----CCHH---
Confidence            346899999999999999996 8899999999998864  33444433  5555544433 33323211    1111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~  232 (262)
                      ++..    ...+.+..... ....++|| .++|+.|++. ++++|+||++...++..++++|+.+||+  .|+++++++.
T Consensus        70 ~~~~----~~~~~~~~~~~-~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd--~i~~~~~~~~  140 (188)
T PRK10725         70 ALAR----EKTEAVKSMLL-DSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD--AVVAADDVQH  140 (188)
T ss_pred             HHHH----HHHHHHHHHHh-ccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce--EEEehhhccC
Confidence            1111    12222322222 23567886 5999999876 9999999999999999999999999999  8999999999


Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .||+|++|     ..+++++|++|++|+||
T Consensus       141 ~KP~p~~~-----~~~~~~~~~~~~~~l~i  165 (188)
T PRK10725        141 HKPAPDTF-----LRCAQLMGVQPTQCVVF  165 (188)
T ss_pred             CCCChHHH-----HHHHHHcCCCHHHeEEE
Confidence            99999999     88999999999999986

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.90  E-value=2.4e-23  Score=172.43  Aligned_cols=164  Identities=19%  Similarity=0.223  Sum_probs=120.7

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  152 (262)
                      |+.+++|+||+||||+|+... +..+|.+++.++|+..+  .+++... ..+.+...+... +.+.+.+.    ..+   
T Consensus         1 ~~~~~~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~~--~~~~~~~-~~g~~~~~~~~~~~~~~~~~~----~~~---   69 (221)
T PRK10563          1 MSQIEAVFFDCDGTLVDSEVI-CSRAYVTMFAEFGITLS--LEEVFKR-FKGVKLYEIIDIISKEHGVTL----AKA---   69 (221)
T ss_pred             CCCCCEEEECCCCCCCCChHH-HHHHHHHHHHHcCCCCC--HHHHHHH-hcCCCHHHHHHHHHHHhCCCC----CHH---
Confidence            346899999999999999986 78899999999987643  3333222 245544444443 33444321    111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~  232 (262)
                      ++...+.+.+...+     .....++||+.++|+.|   +++++|+||++...+...|+++++.++|+. .++++++++.
T Consensus        70 ~~~~~~~~~~~~~~-----~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~-~v~~~~~~~~  140 (221)
T PRK10563         70 ELEPVYRAEVARLF-----DSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD-KLFSGYDIQR  140 (221)
T ss_pred             HHHHHHHHHHHHHH-----HccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc-eEeeHHhcCC
Confidence            22222222222211     12478999999999999   499999999999999999999999999963 5778888899


Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .||+|++|     ..+++++|++|++|+||
T Consensus       141 ~KP~p~~~-----~~a~~~~~~~p~~~l~i  165 (221)
T PRK10563        141 WKPDPALM-----FHAAEAMNVNVENCILV  165 (221)
T ss_pred             CCCChHHH-----HHHHHHcCCCHHHeEEE
Confidence            99999999     88999999999999986

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.90  E-value=7e-23  Score=167.41  Aligned_cols=164  Identities=18%  Similarity=0.245  Sum_probs=114.3

Q ss_pred             cEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCH--HHHHHHHH------------hCCCHHHH-----HHHHHhc
Q 024806           78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDV--DLYGELLK------------IGGGKERM-----TAYFNKT  138 (262)
Q Consensus        78 k~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~--~~~~~~~~------------~~~~~~~~-----~~~~~~~  138 (262)
                      |+|+||+||||+|+... +..++.++++++|+....+.  +.+.+.+.            .|.....+     ...+...
T Consensus         1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   79 (203)
T TIGR02252         1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRA   79 (203)
T ss_pred             CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhc
Confidence            58999999999999986 88899999999998754211  01111110            02222111     1222222


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCC
Q 024806          139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER  218 (262)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~  218 (262)
                      +.+     ......+.       ..+.+..........++||+.++|+.|+++|++++|+||+... +...++.+|+..+
T Consensus        80 ~~~-----~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~  146 (203)
T TIGR02252        80 GVP-----DPESFEKI-------FEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY  146 (203)
T ss_pred             CCC-----CchhHHHH-------HHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh
Confidence            211     11111111       1122221111123578999999999999999999999999864 5788999999999


Q ss_pred             cccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          219 AEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       219 f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+  .|+++++++..||+|++|     ..+++.+|++|++++||
T Consensus       147 fd--~i~~s~~~~~~KP~~~~~-----~~~~~~~~~~~~~~~~I  183 (203)
T TIGR02252       147 FD--FVVTSYEVGAEKPDPKIF-----QEALERAGISPEEALHI  183 (203)
T ss_pred             cc--eEEeecccCCCCCCHHHH-----HHHHHHcCCChhHEEEE
Confidence            99  899999999999999999     88999999999999987

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.90  E-value=8.8e-23  Score=168.87  Aligned_cols=164  Identities=16%  Similarity=0.137  Sum_probs=111.3

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHH---HHccCCCCCCHHHHHHHHH-----hCCCHH-HHHHHHHhcCCCCCCCC
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTF---KEKELGVTWDVDLYGELLK-----IGGGKE-RMTAYFNKTGWPEKAPS  146 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~---~~~g~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~  146 (262)
                      |+++|+||+||||+|+... +..++..+.   .++|++.+  .+.+...+.     .+.... .....+...+..    .
T Consensus         1 ~~~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~   73 (221)
T TIGR02253         1 MIKAIFFDLDDTLIDTSGL-AEKARRNAIEVLIEAGLNVD--FEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEE----Y   73 (221)
T ss_pred             CceEEEEeCCCCCcCCCCc-cCHHHHHHHHHHHHCCCcCC--HHHHHHHHHHHHHHhccccCcchHHHHHHHhhh----c
Confidence            4889999999999999996 666776554   45566543  333322110     011000 000111111000    0


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEe
Q 024806          147 DEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (262)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~  226 (262)
                      ..+.    .   .+.....+ ... .....++||+.++|+.|+++|++++|+||+....+...++++|+.++|+  .|++
T Consensus        74 ~~~~----~---~~~~~~~~-~~~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~--~i~~  142 (221)
T TIGR02253        74 NPKL----V---AAFVYAYH-KLK-FAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD--AVIT  142 (221)
T ss_pred             CHHH----H---HHHHHHHH-HHH-HHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc--EEEE
Confidence            0110    1   11111111 111 1236899999999999999999999999999899999999999999999  8999


Q ss_pred             CCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          227 GDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       227 s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +++++..||+|++|     ..+++++|++|++++||
T Consensus       143 ~~~~~~~KP~~~~~-----~~~~~~~~~~~~~~~~i  173 (221)
T TIGR02253       143 SEEEGVEKPHPKIF-----YAALKRLGVKPEEAVMV  173 (221)
T ss_pred             eccCCCCCCCHHHH-----HHHHHHcCCChhhEEEE
Confidence            99999999999999     88999999999999986

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PLN02940 riboflavin kinase

Probab=99.90  E-value=3e-23  Score=184.53  Aligned_cols=163  Identities=20%  Similarity=0.216  Sum_probs=125.3

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHH-HHHHHhcCCCCCCCCcHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM-TAYFNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  153 (262)
                      ..+++||||+||||+|+... +..+|..+++++|...  +.+.+...  .|...... ...+.+.+.+.    .   .++
T Consensus         9 ~~ik~VIFDlDGTLvDt~~~-~~~a~~~~~~~~G~~~--~~~~~~~~--~G~~~~~~~~~~~~~~~~~~----~---~~~   76 (382)
T PLN02940          9 KLVSHVILDLDGTLLNTDGI-VSDVLKAFLVKYGKQW--DGREAQKI--VGKTPLEAAATVVEDYGLPC----S---TDE   76 (382)
T ss_pred             ccCCEEEECCcCcCCcCHHH-HHHHHHHHHHHcCCCC--CHHHHHHh--cCCCHHHHHHHHHHHhCCCC----C---HHH
Confidence            45899999999999999996 8889999999998764  34444443  55554443 33444444321    1   122


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH-HhcCCCCcccceEEeCCCCCC
Q 024806          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVS-FLLGPERAEKIQIFAGDVVPR  232 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~-~~~l~~~f~~~~Iv~s~~~~~  232 (262)
                      +.+.+.+.    +.+..  ....++||+.++|+.|+++|++++|+||+.+..++..++ .+++.++|+  .|+++++++.
T Consensus        77 ~~~~~~~~----~~~~~--~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd--~ii~~d~v~~  148 (382)
T PLN02940         77 FNSEITPL----LSEQW--CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFS--VIVGGDEVEK  148 (382)
T ss_pred             HHHHHHHH----HHHHH--ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCC--EEEehhhcCC
Confidence            22222222    22222  136799999999999999999999999999999998887 789999999  8999999999


Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .||+|++|     ..+++++|++|++|+||
T Consensus       149 ~KP~p~~~-----~~a~~~lgv~p~~~l~V  173 (382)
T PLN02940        149 GKPSPDIF-----LEAAKRLNVEPSNCLVI  173 (382)
T ss_pred             CCCCHHHH-----HHHHHHcCCChhHEEEE
Confidence            99999999     88999999999999986

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.90  E-value=1.1e-22  Score=173.40  Aligned_cols=170  Identities=22%  Similarity=0.293  Sum_probs=125.5

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      .++|+|||||||||+|+.+. +..++.+++.++|.... ..+.+...  .+.+...+...+....+.. ....+...+++
T Consensus        11 ~~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~l~~~~~~-~~~~~~~~~~~   85 (272)
T PRK13223         11 RLPRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPPA-GLEAVRHW--VGNGAPVLVRRALAGSIDH-DGVDDELAEQA   85 (272)
T ss_pred             ccCCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--hChhHHHHHHHHhcccccc-cCCCHHHHHHH
Confidence            36899999999999999996 88999999999998643 23444443  5555444433321110100 01122222222


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                          .+.+.+.|....  ....++||+.++|+.|+++|++++|+||++...++.+++.+++..+|+  .++++++++..|
T Consensus        86 ----~~~~~~~~~~~~--~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~--~i~~~d~~~~~K  157 (272)
T PRK13223         86 ----LALFMEAYADSH--ELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR--WIIGGDTLPQKK  157 (272)
T ss_pred             ----HHHHHHHHHhcC--cCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe--EEEecCCCCCCC
Confidence                222233332211  135789999999999999999999999999999999999999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     +.+++++|++|++|+||
T Consensus       158 p~p~~~-----~~~~~~~g~~~~~~l~I  180 (272)
T PRK13223        158 PDPAAL-----LFVMKMAGVPPSQSLFV  180 (272)
T ss_pred             CCcHHH-----HHHHHHhCCChhHEEEE
Confidence            999999     88899999999999986

>PRK09449 dUMP phosphatase; Provisional

Probab=99.89  E-value=2.4e-22  Score=166.71  Aligned_cols=165  Identities=12%  Similarity=0.165  Sum_probs=113.1

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHH---
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEER---  151 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  151 (262)
                      |++|+||||+||||+|..   ...++.++++.+|+..+  .+.+..+...+.   .+...+....      ......   
T Consensus         1 m~~k~iiFDlDGTLid~~---~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~   66 (224)
T PRK09449          1 MKYDWILFDADETLFHFD---AFAGLQRMFSRYGVDFT--AEDFQDYQAVNK---PLWVDYQNGA------ITALQLQHT   66 (224)
T ss_pred             CCccEEEEcCCCchhcch---hhHHHHHHHHHhCCCCc--HHHHHHHHHHHH---HHHHHHHcCC------CCHHHHHHH
Confidence            368999999999999853   34688899999887643  333333211211   1111111110      011111   


Q ss_pred             --HHHHHHH---HHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEe
Q 024806          152 --KQFIASL---HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (262)
Q Consensus       152 --~~~~~~~---~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~  226 (262)
                        ..+.+.+   .....+.|.+.+.. ...++||+.++|+.|+ +|++++|+||+....++..++.+|+.++|+  .|++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~v~~  142 (224)
T PRK09449         67 RFESWAEKLNVTPGELNSAFLNAMAE-ICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD--LLVI  142 (224)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHhh-cCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC--EEEE
Confidence              0011110   01122333333332 3679999999999999 579999999999999999999999999999  8999


Q ss_pred             CCCCCCCCCChHHHhhhhhhhhhhhcccCC-cccccC
Q 024806          227 GDVVPRKKPDPVKICSLTVDIVCNVLKTHA-HKNVLV  262 (262)
Q Consensus       227 s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p-~e~v~I  262 (262)
                      +++++..||+|++|     ..+++++|+.| ++|+||
T Consensus       143 ~~~~~~~KP~p~~~-----~~~~~~~~~~~~~~~~~v  174 (224)
T PRK09449        143 SEQVGVAKPDVAIF-----DYALEQMGNPDRSRVLMV  174 (224)
T ss_pred             ECccCCCCCCHHHH-----HHHHHHcCCCCcccEEEE
Confidence            99999999999999     88999999865 788886

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.89  E-value=1e-22  Score=165.82  Aligned_cols=81  Identities=20%  Similarity=0.315  Sum_probs=77.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+++|++++|+||++...+...++++|+.++|+  .|+++++++..||+|++|     +.+++++|+
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~~~~~-----~~~~~~~~~  163 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD--AVLSADAVRAYKPAPQVY-----QLALEALGV  163 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh--eeEehhhcCCCCCCHHHH-----HHHHHHhCC
Confidence            6789999999999999999999999999999999999999999999  899999999999999999     889999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|+++++|
T Consensus       164 ~p~~~~~v  171 (198)
T TIGR01428       164 PPDEVLFV  171 (198)
T ss_pred             ChhhEEEE
Confidence            99999986

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.89  E-value=2.5e-22  Score=164.48  Aligned_cols=153  Identities=24%  Similarity=0.334  Sum_probs=117.4

Q ss_pred             EEEecCccccccCcchHHHHHHHHHHHc-cCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHHHHHH
Q 024806           80 LLFDCDGVLVDTEKDGHRISFNDTFKEK-ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASL  158 (262)
Q Consensus        80 viFD~DGTL~d~~~~~~~~a~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (262)
                      |||||||||+|+... +..+++++++++ |.+. .+.+.+...  .|.....+.+.   .+.+      ...    ...+
T Consensus         1 iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~--~g~~~~~~~~~---~~~~------~~~----~~~~   63 (205)
T TIGR01454         1 VVFDLDGVLVDSFAV-MREAFAIAYREVVGDGP-APFEEYRRH--LGRYFPDIMRI---MGLP------LEM----EEPF   63 (205)
T ss_pred             CeecCcCccccCHHH-HHHHHHHHHHHhcCCCC-CCHHHHHHH--hCccHHHHHHH---cCCC------HHH----HHHH
Confidence            699999999999996 889999999884 6643 244555554  55554444332   2221      111    1111


Q ss_pred             HHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChH
Q 024806          159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPV  238 (262)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~  238 (262)
                      ..   +.+ ..  .....++||+.++|+.|+++|++++|+||+....+...++.+|+.++|+  .++++++++..||+|+
T Consensus        64 ~~---~~~-~~--~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~~~  135 (205)
T TIGR01454        64 VR---ESY-RL--AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFD--HVIGSDEVPRPKPAPD  135 (205)
T ss_pred             HH---HHH-Hh--hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhee--eEEecCcCCCCCCChH
Confidence            11   111 11  1247899999999999999999999999999999999999999999999  8999999999999999


Q ss_pred             HHhhhhhhhhhhhcccCCcccccC
Q 024806          239 KICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       239 ~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|     ..+++++|++|++++||
T Consensus       136 ~~-----~~~~~~~~~~~~~~l~i  154 (205)
T TIGR01454       136 IV-----REALRLLDVPPEDAVMV  154 (205)
T ss_pred             HH-----HHHHHHcCCChhheEEE
Confidence            99     88899999999999986

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.89  E-value=2.8e-22  Score=163.22  Aligned_cols=173  Identities=15%  Similarity=0.069  Sum_probs=116.3

Q ss_pred             cEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCC-------HHHHHHHHHhcCCCCCCCCcHHH
Q 024806           78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGG-------KERMTAYFNKTGWPEKAPSDEEE  150 (262)
Q Consensus        78 k~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  150 (262)
                      ++|||||||||+|+.+. +..+++++++++|.. ..+.+.+..+...+..       ...+...+.......  ......
T Consensus         1 ~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   76 (197)
T TIGR01548         1 QALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV-SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSER--VRDAPT   76 (197)
T ss_pred             CceEEecCceEEechHH-HHHHHHHHHHHHcCC-CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchh--ccCCcc
Confidence            47999999999999996 889999999999753 2234556555322221       122333332110000  001111


Q ss_pred             HHHHHHHHHHHHHHH--HHHHH-Hh-cCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEe
Q 024806          151 RKQFIASLHKRKTEL--FMVLI-EK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (262)
Q Consensus       151 ~~~~~~~~~~~~~~~--~~~~~-~~-~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~  226 (262)
                      .+++.+.+.+.+...  +.... .. ....+.+++.++|+.|+++|++++|+||+++..++.+++.+|+..+|+  .+++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~~~~  154 (197)
T TIGR01548        77 LEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP--VQIW  154 (197)
T ss_pred             HHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC--EEEe
Confidence            122222222221110  00000 00 012455677999999999999999999999999999999999999999  8999


Q ss_pred             CCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          227 GDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       227 s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++++.. ||+|++|     ..+++++|++|++|+||
T Consensus       155 ~~~~~~-KP~p~~~-----~~~~~~~~~~~~~~i~v  184 (197)
T TIGR01548       155 MEDCPP-KPNPEPL-----ILAAKALGVEACHAAMV  184 (197)
T ss_pred             ecCCCC-CcCHHHH-----HHHHHHhCcCcccEEEE
Confidence            998877 9999999     78899999999999986

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.89  E-value=5.8e-22  Score=164.41  Aligned_cols=168  Identities=22%  Similarity=0.308  Sum_probs=126.7

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  153 (262)
                      +++++|+||+||||+|+... +..++..+++++|.... +.+.+...  .+.+...+... +...+.    .......++
T Consensus         4 ~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~--~g~~~~~~~~~~~~~~~~----~~~~~~~~~   75 (226)
T PRK13222          4 MDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLPPA-GEERVRTW--VGNGADVLVERALTWAGR----EPDEELLEK   75 (226)
T ss_pred             CcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCCCC-CHHHHHHH--hCccHHHHHHHHHhhccC----CccHHHHHH
Confidence            56899999999999999886 77899999999887643 34455443  45554444333 322111    122333233


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      ..    ..+.+.|.+... ....++||+.++|+.|+++|++++|+||+....+..+++.+++..+|+  .++++++++..
T Consensus        76 ~~----~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~  148 (226)
T PRK13222         76 LR----ELFDRHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS--VVIGGDSLPNK  148 (226)
T ss_pred             HH----HHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc--EEEcCCCCCCC
Confidence            23    333333443322 236799999999999999999999999999999999999999999999  89999999999


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|++|     +.++++++++|+++++|
T Consensus       149 kp~~~~~-----~~~~~~~~~~~~~~i~i  172 (226)
T PRK13222        149 KPDPAPL-----LLACEKLGLDPEEMLFV  172 (226)
T ss_pred             CcChHHH-----HHHHHHcCCChhheEEE
Confidence            9999999     88999999999999986

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.88  E-value=3.3e-22  Score=165.91  Aligned_cols=82  Identities=9%  Similarity=0.097  Sum_probs=78.2

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ...++||+.++|+.|+++|++++|+||+.+..++..++++|+.++|+  .|+++++++..||+|++|     ..+++++|
T Consensus        91 ~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~iv~s~~~~~~KP~p~~~-----~~~~~~~~  163 (224)
T PRK14988         91 RAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD--LLLSTHTFGYPKEDQRLW-----QAVAEHTG  163 (224)
T ss_pred             cCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC--EEEEeeeCCCCCCCHHHH-----HHHHHHcC
Confidence            37899999999999999999999999999999999999999999999  899999999999999999     88999999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|++|+||
T Consensus       164 ~~p~~~l~i  172 (224)
T PRK14988        164 LKAERTLFI  172 (224)
T ss_pred             CChHHEEEE
Confidence            999999986

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.88  E-value=1.7e-21  Score=161.33  Aligned_cols=165  Identities=15%  Similarity=0.225  Sum_probs=115.6

Q ss_pred             CcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHH-HHHHH
Q 024806           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEE-RKQFI  155 (262)
Q Consensus        77 ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  155 (262)
                      +|+|+||+||||+|+... +..++.++++++|+...  ......+  .+.+. ..+..+.. +.     ..... ..+.+
T Consensus         1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~~~~~-~~~~~~~~-~~-----~~~~~~~~~~~   68 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIPLT--EDMFAQY--KEINQ-GLWRAYEE-GK-----ITKDEVVNTRF   68 (224)
T ss_pred             CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCCcc--HHHHHHH--HHHhH-HHHHHHHc-CC-----CCHHHHHHHHH
Confidence            689999999999999996 77889999999887643  2222221  11111 11111111 10     01110 00000


Q ss_pred             HHHH---------HHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEe
Q 024806          156 ASLH---------KRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (262)
Q Consensus       156 ~~~~---------~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~  226 (262)
                      ..+.         +...+.|...... ...++||+.++|+.|+++ ++++|+||+....++..++.+++..+|+  .|++
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd--~i~~  144 (224)
T TIGR02254        69 SALLKEYNTEADEALLNQKYLRFLEE-GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD--DIFV  144 (224)
T ss_pred             HHHHHHhCCCCcHHHHHHHHHHHHhc-cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC--EEEE
Confidence            0000         0122233332222 367999999999999999 9999999999999999999999999999  8999


Q ss_pred             CCCCCCCCCChHHHhhhhhhhhhhhc-ccCCcccccC
Q 024806          227 GDVVPRKKPDPVKICSLTVDIVCNVL-KTHAHKNVLV  262 (262)
Q Consensus       227 s~~~~~~KPdp~~~~~~~~~~a~~~l-gv~p~e~v~I  262 (262)
                      +++++..||+|++|     ..+++++ |++|+++|||
T Consensus       145 ~~~~~~~KP~~~~~-----~~~~~~~~~~~~~~~v~i  176 (224)
T TIGR02254       145 SEDAGIQKPDKEIF-----NYALERMPKFSKEEVLMI  176 (224)
T ss_pred             cCccCCCCCCHHHH-----HHHHHHhcCCCchheEEE
Confidence            99999999999999     8899999 9999999987

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.88  E-value=1.6e-21  Score=165.93  Aligned_cols=158  Identities=16%  Similarity=0.162  Sum_probs=118.0

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (262)
                      .+++||||+||||+|+.+. +..+++++++++|+... +.+.+...  .+...+.+.+.   .++      .....+++.
T Consensus        61 ~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~~~-~~~~~~~~--~g~~~~~i~~~---~~~------~~~~~~~~~  127 (273)
T PRK13225         61 TLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYDPI-DERDYAQL--RQWSSRTIVRR---AGL------SPWQQARLL  127 (273)
T ss_pred             hcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCCCC-CHHHHHHH--hCccHHHHHHH---cCC------CHHHHHHHH
Confidence            5899999999999999996 78899999999998633 34555554  44444444332   222      122223333


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCC
Q 024806          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (262)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KP  235 (262)
                      +.+.+    .+....  ....++||+.++|+.|+++|++++|+||+....++.+++++|+.++|+  .+++++++.   |
T Consensus       128 ~~~~~----~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~~~---~  196 (273)
T PRK13225        128 QRVQR----QLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTPIL---S  196 (273)
T ss_pred             HHHHH----HHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCCCC---C
Confidence            33322    232221  236889999999999999999999999999999999999999999999  788777642   4


Q ss_pred             ChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          236 DPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       236 dp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|++|     ..+++++|++|++|+||
T Consensus       197 k~~~~-----~~~l~~~~~~p~~~l~I  218 (273)
T PRK13225        197 KRRAL-----SQLVAREGWQPAAVMYV  218 (273)
T ss_pred             CHHHH-----HHHHHHhCcChhHEEEE
Confidence            46778     77899999999999986

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.87  E-value=5.6e-22  Score=157.15  Aligned_cols=154  Identities=23%  Similarity=0.317  Sum_probs=115.2

Q ss_pred             EEEecCccccccCcchHHHHHHH-HHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHHHHHHH
Q 024806           80 LLFDCDGVLVDTEKDGHRISFND-TFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQFIAS  157 (262)
Q Consensus        80 viFD~DGTL~d~~~~~~~~a~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  157 (262)
                      |+||+||||+|+... +..++.. +++.++..  .+.+.++..  .+......... +...         ...       
T Consensus         1 iifD~dgtL~d~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~-------   59 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPA-IFRALQRLALEEFGLE--ISAEELREL--FGKSYEEALERLLERF---------GID-------   59 (176)
T ss_dssp             EEEESBTTTEEHHHH-HHHHHHHHHHHHTTHH--HHHHHHHHH--TTSHHHHHHHHHHHHH---------HHH-------
T ss_pred             cEEECCCCcEeCHHH-HHHHHHHHHHHHhCCC--CCHHHHHHH--hCCCHHHHHHHhhhcc---------chh-------
Confidence            799999999999985 6677877 46776655  223444443  33333333332 2211         000       


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCCh
Q 024806          158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP  237 (262)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp  237 (262)
                       .....+.+.+.......+++||+.++|+.|+++|++++++||++...++..++++|+.++|+  .++++++.+..||+|
T Consensus        60 -~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~--~i~~~~~~~~~Kp~~  136 (176)
T PF13419_consen   60 -PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFD--EIISSDDVGSRKPDP  136 (176)
T ss_dssp             -HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCS--EEEEGGGSSSSTTSH
T ss_pred             -HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccc--cccccchhhhhhhHH
Confidence             12222333333222357899999999999999999999999999999999999999999999  899999999999999


Q ss_pred             HHHhhhhhhhhhhhcccCCcccccC
Q 024806          238 VKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       238 ~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++|     +.+++++|++|++++||
T Consensus       137 ~~~-----~~~~~~~~~~p~~~~~v  156 (176)
T PF13419_consen  137 DAY-----RRALEKLGIPPEEILFV  156 (176)
T ss_dssp             HHH-----HHHHHHHTSSGGGEEEE
T ss_pred             HHH-----HHHHHHcCCCcceEEEE
Confidence            999     88999999999999986

...

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.87  E-value=1.1e-21  Score=161.38  Aligned_cols=162  Identities=17%  Similarity=0.164  Sum_probs=106.4

Q ss_pred             CcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHHHH
Q 024806           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIA  156 (262)
Q Consensus        77 ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (262)
                      +|+||||+||||+|+..  ...+|...+...|++   ..+....+  .+.....+.+.+. .|-     ...+   ++.+
T Consensus         2 ik~viFDldGtL~d~~~--~~~~~~~~~~~~g~~---~~~~~~~~--~~~~~~~~~~~~~-~g~-----~~~~---~~~~   65 (211)
T TIGR02247         2 IKAVIFDFGGVLLPSPG--VMRRWETERGLPGLK---DFIVTVNI--TGPDFNPWARTFE-RGE-----LTAE---AFDG   65 (211)
T ss_pred             ceEEEEecCCceecCHH--HHHHHHHHcCCCCCc---cHHHHHHh--cCCCCChHHHHHH-cCC-----CCHH---HHHH
Confidence            68999999999999865  444666655555543   12222222  3443333333222 110     1111   1222


Q ss_pred             HHHHHH----------HHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHH--HHHHHHHhcCCCCcccceE
Q 024806          157 SLHKRK----------TELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKA--VTAIVSFLLGPERAEKIQI  224 (262)
Q Consensus       157 ~~~~~~----------~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~--~~~~L~~~~l~~~f~~~~I  224 (262)
                      .+.+..          .+.+.. .......++||+.++|+.|+++|++++|+||+....  ....+...++.++|+  .|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd--~v  142 (211)
T TIGR02247        66 LFRHEYGLRLGHDVRIAPVFPL-LYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFD--AV  142 (211)
T ss_pred             HHHHHhccccCCCcCchhhHHH-HhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCC--EE
Confidence            222111          111222 122247799999999999999999999999987543  333444567889999  89


Q ss_pred             EeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          225 FAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       225 v~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +++++++..||+|++|     +.+++++|+.|++|+||
T Consensus       143 ~~s~~~~~~KP~p~~~-----~~~~~~~g~~~~~~l~i  175 (211)
T TIGR02247       143 VESCLEGLRKPDPRIY-----QLMLERLGVAPEECVFL  175 (211)
T ss_pred             EEeeecCCCCCCHHHH-----HHHHHHcCCCHHHeEEE
Confidence            9999999999999999     88999999999999986

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.87  E-value=4e-21  Score=175.37  Aligned_cols=165  Identities=19%  Similarity=0.215  Sum_probs=118.1

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccC----CCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKEL----GVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEE  149 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (262)
                      .+|+++|||||||||+|+... +..+|.+++++++.    ......+.+...  .|.+.......+...       ....
T Consensus       238 ~~m~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~G~~~~~~~~~l~~~-------~~~~  307 (459)
T PRK06698        238 NEMLQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREI--MGVPLPKVWEALLPD-------HSLE  307 (459)
T ss_pred             HHhhhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHH--cCCChHHHHHHHhhh-------cchh
Confidence            567899999999999999997 88899999998741    111123445444  566655554443211       0111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC
Q 024806          150 ERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV  229 (262)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~  229 (262)
                      .    .+.....+.+.+.+.+.....+++||+.++|+.|+++|++++|+||+....++..++.+++.+||+  .++++++
T Consensus       308 ~----~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~--~i~~~d~  381 (459)
T PRK06698        308 I----REQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVT--ETFSIEQ  381 (459)
T ss_pred             H----HHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcc--eeEecCC
Confidence            1    112222223333333333346899999999999999999999999999999999999999999999  8999988


Q ss_pred             CCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          230 VPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       230 ~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +. .||+|++|     ..++++++  |++|++|
T Consensus       382 v~-~~~kP~~~-----~~al~~l~--~~~~v~V  406 (459)
T PRK06698        382 IN-SLNKSDLV-----KSILNKYD--IKEAAVV  406 (459)
T ss_pred             CC-CCCCcHHH-----HHHHHhcC--cceEEEE
Confidence            74 46778888     66777764  6889876

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.86  E-value=1.4e-20  Score=185.47  Aligned_cols=168  Identities=26%  Similarity=0.278  Sum_probs=125.3

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHH-hcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (262)
                      -+++++|||||||||+|+... +..+|.++++++|++.  +.+.+...  .+.+...+...+. ..+.+.   ...   +
T Consensus        72 ~~~ikaVIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~i--t~e~~~~~--~G~~~~~~~~~~~~~~~l~~---~~~---~  140 (1057)
T PLN02919         72 WGKVSAVLFDMDGVLCNSEEP-SRRAAVDVFAEMGVEV--TVEDFVPF--MGTGEANFLGGVASVKGVKG---FDP---D  140 (1057)
T ss_pred             CCCCCEEEECCCCCeEeChHH-HHHHHHHHHHHcCCCC--CHHHHHHH--hCCCHHHHHHHHHHhcCCCC---CCH---H
Confidence            347899999999999999996 8899999999998864  34555544  5655555544332 222211   111   1


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC-CCcccceEEeCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP-ERAEKIQIFAGDVVP  231 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~-~~f~~~~Iv~s~~~~  231 (262)
                      +..+.+.+.+.+.|..   .....++||+.++|+.|+++|++++|+||+....++..++++++. .+|+  .++++++++
T Consensus       141 ~~~~~~~~~~~~~~~~---~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd--~iv~~~~~~  215 (1057)
T PLN02919        141 AAKKRFFEIYLEKYAK---PNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD--AIVSADAFE  215 (1057)
T ss_pred             HHHHHHHHHHHHHhhh---cccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC--EEEECcccc
Confidence            1122222222222211   112347999999999999999999999999999999999999996 7899  899999999


Q ss_pred             CCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          232 RKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       232 ~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ..||+|++|     ..+++++|+.|++|+||
T Consensus       216 ~~KP~Pe~~-----~~a~~~lgv~p~e~v~I  241 (1057)
T PLN02919        216 NLKPAPDIF-----LAAAKILGVPTSECVVI  241 (1057)
T ss_pred             cCCCCHHHH-----HHHHHHcCcCcccEEEE
Confidence            999999999     78899999999999986

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.86  E-value=6.5e-21  Score=158.36  Aligned_cols=80  Identities=18%  Similarity=0.212  Sum_probs=77.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      .+++|++.++|+.|+++ ++++|+||+....+...++++|+.++||  .|++|+++|..||+|++|     +.+++++|+
T Consensus        98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd--~v~~s~~~g~~KP~~~~f-----~~~~~~~g~  169 (229)
T COG1011          98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFD--AVFISEDVGVAKPDPEIF-----EYALEKLGV  169 (229)
T ss_pred             CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhh--eEEEecccccCCCCcHHH-----HHHHHHcCC
Confidence            78999999999999999 9999999999899999999999999999  999999999999999999     999999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|++++||
T Consensus       170 ~p~~~l~V  177 (229)
T COG1011         170 PPEEALFV  177 (229)
T ss_pred             CcceEEEE
Confidence            99999986

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.85  E-value=1.9e-20  Score=156.88  Aligned_cols=162  Identities=14%  Similarity=0.040  Sum_probs=106.1

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCC----CCCHHHHHHHHH---hCC----------CHHHHHHHHHh
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV----TWDVDLYGELLK---IGG----------GKERMTAYFNK  137 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~----~~~~~~~~~~~~---~~~----------~~~~~~~~~~~  137 (262)
                      .++|+|+||+||||+|+.+. +..+++++++..+...    .+....+..+..   ...          ....+...+..
T Consensus         8 ~~~k~iiFDlDGTL~D~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   86 (238)
T PRK10748          8 GRISALTFDLDDTLYDNRPV-ILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLD   86 (238)
T ss_pred             CCceeEEEcCcccccCChHH-HHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHH
Confidence            46899999999999999995 7888888776542111    111121221100   000          01112223333


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .|.+      ....+..    .....+.+....  ....++||+.++|+.|+++ ++++|+||++..     ++.+|+.+
T Consensus        87 ~g~~------~~~~~~~----~~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~  148 (238)
T PRK10748         87 AGLS------AEEASAG----ADAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGD  148 (238)
T ss_pred             cCCC------HHHHHHH----HHHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHH
Confidence            3321      1111111    111111222211  1368999999999999975 999999998754     47789999


Q ss_pred             CcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          218 RAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       218 ~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|+  .|+++++++..||+|++|     +.+++++|+.|++|+||
T Consensus       149 ~fd--~i~~~~~~~~~KP~p~~~-----~~a~~~~~~~~~~~~~V  186 (238)
T PRK10748        149 YFE--FVLRAGPHGRSKPFSDMY-----HLAAEKLNVPIGEILHV  186 (238)
T ss_pred             hhc--eeEecccCCcCCCcHHHH-----HHHHHHcCCChhHEEEE
Confidence            999  899999999999999999     88899999999999987

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.85  E-value=8.6e-21  Score=152.75  Aligned_cols=153  Identities=12%  Similarity=0.171  Sum_probs=104.7

Q ss_pred             cEEEEecCccccccCcchHHHHHHHHHH-----HccCCCCCCHHHHHHHH--HhCCCHHHHHHHHHhcCCCCCCCCcHHH
Q 024806           78 SALLFDCDGVLVDTEKDGHRISFNDTFK-----EKELGVTWDVDLYGELL--KIGGGKERMTAYFNKTGWPEKAPSDEEE  150 (262)
Q Consensus        78 k~viFD~DGTL~d~~~~~~~~a~~~~~~-----~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (262)
                      ++||||+||||+|+... +..++++.+.     ++|++.. +...+...+  ..|.....+.   ...+      ...  
T Consensus         1 ~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~~~g~~~~-~~~~l~~~~~~~~g~~~~~~~---~~~~------~~~--   67 (184)
T TIGR01993         1 DVWFFDLDNTLYPHSAG-IFLQIDRNITEFVAARLKLSEE-EARVLRKDYYREYGTTLAGLM---ILHE------IDA--   67 (184)
T ss_pred             CeEEEeCCCCCCCCccc-HHHHHHHHHHHHHHHHcCcCHH-HHHHHHHHHHHHHchHHHHHH---HhhC------CCH--
Confidence            47999999999999886 6677777654     4455422 111121110  1222222221   1111      111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCC
Q 024806          151 RKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV  230 (262)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~  230 (262)
                       +++.+.+.+.        .......++||+.++|+.|+   ++++|+||++...+...++.+|+.++|+  .|++++++
T Consensus        68 -~~~~~~~~~~--------~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd--~i~~~~~~  133 (184)
T TIGR01993        68 -DEYLRYVHGR--------LPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFD--GIFCFDTA  133 (184)
T ss_pred             -HHHHHHHhcc--------CCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhC--eEEEeecc
Confidence             1122222110        00113678999999999997   5899999999999999999999999999  89999988


Q ss_pred             CC----CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          231 PR----KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       231 ~~----~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +.    .||+|++|     +.+++++|++|++|+||
T Consensus       134 ~~~~~~~KP~p~~~-----~~~~~~~~~~~~~~l~v  164 (184)
T TIGR01993       134 NPDYLLPKPSPQAY-----EKALREAGVDPERAIFF  164 (184)
T ss_pred             cCccCCCCCCHHHH-----HHHHHHhCCCccceEEE
Confidence            87    59999999     88899999999999986

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.84  E-value=2.8e-20  Score=151.85  Aligned_cols=163  Identities=25%  Similarity=0.292  Sum_probs=125.9

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHH-hcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (262)
                      +..+.+++||+||||+|++.. +.++|++++.+||...++  +.....  .|....++.+.+. ...       .....+
T Consensus         7 ~~~~~~~lfD~dG~lvdte~~-y~~~~~~~~~~ygk~~~~--~~~~~~--mG~~~~eaa~~~~~~~~-------dp~s~e   74 (222)
T KOG2914|consen    7 SLKVSACLFDMDGTLVDTEDL-YTEAWQELLDRYGKPYPW--DVKVKS--MGKRTSEAARLFVKKLP-------DPVSRE   74 (222)
T ss_pred             ccceeeEEEecCCcEEecHHH-HHHHHHHHHHHcCCCChH--HHHHHH--cCCCHHHHHHHHHhhcC-------CCCCHH
Confidence            356789999999999999997 889999999999985443  444443  7777777776664 221       122233


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc-CCCCcccceEEe--CCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL-GPERAEKIQIFA--GDV  229 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~-l~~~f~~~~Iv~--s~~  229 (262)
                      ++..+......+.+.      ...++||+.++++.|+.+|++++++|+.++..++..+++++ +...|+  .++.  +.+
T Consensus        75 e~~~e~~~~~~~~~~------~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~--~~v~~d~~~  146 (222)
T KOG2914|consen   75 EFNKEEEEILDRLFM------NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFS--HVVLGDDPE  146 (222)
T ss_pred             HHHHHHHHHHHHhcc------ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcC--CCeecCCcc
Confidence            444444444333332      36789999999999999999999999999999999999986 778888  5555  668


Q ss_pred             CCCCCCChHHHhhhhhhhhhhhcccCC-ccccc
Q 024806          230 VPRKKPDPVKICSLTVDIVCNVLKTHA-HKNVL  261 (262)
Q Consensus       230 ~~~~KPdp~~~~~~~~~~a~~~lgv~p-~e~v~  261 (262)
                      +..+||+|++|     ..|++++|..| +.|++
T Consensus       147 v~~gKP~Pdi~-----l~A~~~l~~~~~~k~lV  174 (222)
T KOG2914|consen  147 VKNGKPDPDIY-----LKAAKRLGVPPPSKCLV  174 (222)
T ss_pred             ccCCCCCchHH-----HHHHHhcCCCCccceEE
Confidence            89999999999     78899999988 77765

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.84  E-value=2.1e-20  Score=146.10  Aligned_cols=140  Identities=24%  Similarity=0.266  Sum_probs=106.2

Q ss_pred             EEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHHHHHH
Q 024806           79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASL  158 (262)
Q Consensus        79 ~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (262)
                      +|+||+||||+|+... +..+|.++++++|.    +.+.+...  .|...+.+.....                 ..+++
T Consensus         1 ~iifD~DGTL~d~~~~-~~~~~~~~~~~~~~----~~~~~~~~--~g~~~~~~~~~~~-----------------~~~~~   56 (154)
T TIGR01549         1 AILFDIDGTLVDSSFA-IRRAFEETLEEFGE----DFQALKAL--RGLAEELLYRIAT-----------------SFEEL   56 (154)
T ss_pred             CeEecCCCcccccHHH-HHHHHHHHHHHhcc----cHHHHHHH--HccChHHHHHHHH-----------------HHHHH
Confidence            4899999999999885 88899999999874    23333332  2222222211110                 01111


Q ss_pred             HHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChH
Q 024806          159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPV  238 (262)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~  238 (262)
                      ..     |.     .....+||+.++|+.|+++|++++|+||+.+..+...++.+ +.++|+  .++++++++ .||+|+
T Consensus        57 ~~-----~~-----~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~--~i~~~~~~~-~Kp~~~  122 (154)
T TIGR01549        57 LG-----YD-----AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFD--LILGSDEFG-AKPEPE  122 (154)
T ss_pred             hC-----cc-----hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCc--EEEecCCCC-CCcCHH
Confidence            11     11     12457899999999999999999999999999999999998 888998  889999888 999999


Q ss_pred             HHhhhhhhhhhhhcccCCcccccC
Q 024806          239 KICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       239 ~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|     ..+++++|++| +|+||
T Consensus       123 ~~-----~~~~~~~~~~~-~~l~i  140 (154)
T TIGR01549       123 IF-----LAALESLGLPP-EVLHV  140 (154)
T ss_pred             HH-----HHHHHHcCCCC-CEEEE
Confidence            99     88999999999 99986

HAD subfamilies caused by an overly broad single model.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.83  E-value=9.7e-21  Score=151.13  Aligned_cols=150  Identities=22%  Similarity=0.290  Sum_probs=102.1

Q ss_pred             EEEEecCccccccCcchHHHHHHHHHHHccCCC-CCCHH----HHHHHHHhCC--CH-H----HHHHHHHhcCCCCCCCC
Q 024806           79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV-TWDVD----LYGELLKIGG--GK-E----RMTAYFNKTGWPEKAPS  146 (262)
Q Consensus        79 ~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~-~~~~~----~~~~~~~~~~--~~-~----~~~~~~~~~~~~~~~~~  146 (262)
                      +|+||+||||+|+... +..+++.++.+.+... .+...    .+... ..+.  .. +    .+.....+.|.+.    
T Consensus         1 ~viFD~DGTL~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~----   74 (175)
T TIGR01493         1 AMVFDVYGTLVDVHGG-VRACLAAIAPEGGAFSDLWRAKQQEYSWRRS-LMGDRRAFPEDTVRALRYIADRLGLDA----   74 (175)
T ss_pred             CeEEecCCcCcccHHH-HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH-HhcCcCCHHHHHHHHHHHHHHHcCCCC----
Confidence            5899999999999986 7778888877643210 01111    11111 0111  11 1    1222222333221    


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEe
Q 024806          147 DEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (262)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~  226 (262)
                      ..+        +.+.    +.+.+.  ...++||+.++|+       +++|+||++...++..++++|+.++|+  .|++
T Consensus        75 ~~~--------~~~~----~~~~~~--~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~v~~  131 (175)
T TIGR01493        75 EPK--------YGER----LRDAYK--NLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFD--RAFS  131 (175)
T ss_pred             CHH--------HHHH----HHHHHh--cCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHh--hhcc
Confidence            111        1111    111111  3679999999998       379999999999999999999999999  7899


Q ss_pred             CCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          227 GDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       227 s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +++++..||+|++|     ..+++++|++|++|+||
T Consensus       132 ~~~~~~~KP~p~~f-----~~~~~~~~~~p~~~l~v  162 (175)
T TIGR01493       132 VDTVRAYKPDPVVY-----ELVFDTVGLPPDRVLMV  162 (175)
T ss_pred             HhhcCCCCCCHHHH-----HHHHHHHCCCHHHeEeE
Confidence            99999999999999     88999999999999987

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.82  E-value=1.9e-19  Score=144.27  Aligned_cols=80  Identities=24%  Similarity=0.275  Sum_probs=74.1

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      .+++||+.++|+.|+++|++++|+||+.... ..++.++|+.++|+  .++++++++..||+|++|     +.+++++|+
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~--~i~~~~~~~~~KP~~~~~-----~~~~~~~~~  155 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD--VVIFSGDVGRGKPDPDIY-----LLALKKLGL  155 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC--EEEEcCCCCCCCCCHHHH-----HHHHHHcCC
Confidence            5789999999999999999999999999887 66776799999999  899999999999999999     888999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|++++||
T Consensus       156 ~~~~~~~v  163 (183)
T TIGR01509       156 KPEECLFV  163 (183)
T ss_pred             CcceEEEE
Confidence            99999986

HAD subfamilies caused by an overly broad single model.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.81  E-value=1.8e-19  Score=146.83  Aligned_cols=81  Identities=22%  Similarity=0.229  Sum_probs=73.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~-~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ..++||+.++|+.|+++|++++|+||++...+...+.. .++..+|+  .++++++++..||+|++|     +.+++++|
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~KP~p~~~-----~~~~~~~~  155 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAAD--HIYLSQDLGMRKPEARIY-----QHVLQAEG  155 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcC--EEEEecccCCCCCCHHHH-----HHHHHHcC
Confidence            46899999999999999999999999998877766655 36788999  899999999999999999     88999999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|++|+||
T Consensus       156 ~~p~~~l~v  164 (199)
T PRK09456        156 FSAADAVFF  164 (199)
T ss_pred             CChhHeEEe
Confidence            999999986

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.80  E-value=2.1e-19  Score=147.23  Aligned_cols=171  Identities=16%  Similarity=0.164  Sum_probs=115.9

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHH----HH----h--------C-CCHHHHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGEL----LK----I--------G-GGKERMTAYFN  136 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~----~~----~--------~-~~~~~~~~~~~  136 (262)
                      .+.+++|+||++|||+.+.+. ..+.+..+.+.+|+..+.  +.....    +.    .        | .+...++..+-
T Consensus         4 ~~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv   80 (237)
T KOG3085|consen    4 LMRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYDD--SLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLV   80 (237)
T ss_pred             ccceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCCH--HHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHH
Confidence            357899999999999997775 677899999999998532  222211    10    0        0 12233333211


Q ss_pred             hcCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      ...+........+   +..+.+.   ...|.... .......+++.++++.||++|..++++||.+ ...+..+..+|+.
T Consensus        81 ~~~f~~~~~~~~~---~~~~~~~---~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d-~r~~~~l~~~~l~  152 (237)
T KOG3085|consen   81 ESTFGKAGIDYEE---ELLENFS---FRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNFD-DRLRLLLLPLGLS  152 (237)
T ss_pred             HHHhccccchhHH---HHHhhhh---hheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCCc-HHHHHHhhccCHH
Confidence            1111110000000   0010000   11121111 1246778899999999999999999999999 4556888999999


Q ss_pred             CCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          217 ERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       217 ~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .|||  .++.|.++|..||||.||     ..+++++|++|+|||+|
T Consensus       153 ~~fD--~vv~S~e~g~~KPDp~If-----~~al~~l~v~Pee~vhI  191 (237)
T KOG3085|consen  153 AYFD--FVVESCEVGLEKPDPRIF-----QLALERLGVKPEECVHI  191 (237)
T ss_pred             Hhhh--hhhhhhhhccCCCChHHH-----HHHHHHhCCChHHeEEe
Confidence            9999  899999999999999999     88999999999999986

>PLN02811 hydrolase

Probab=99.79  E-value=2.7e-18  Score=142.09  Aligned_cols=156  Identities=19%  Similarity=0.257  Sum_probs=110.7

Q ss_pred             cCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 024806           84 CDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQFIASLHKRK  162 (262)
Q Consensus        84 ~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (262)
                      |||||+|+... +..+|.++++++|+..  ..+.+...  .|.....+... +...+.+..  ...+   ++...    .
T Consensus         1 ~DGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~--~G~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~----~   66 (220)
T PLN02811          1 MDGLLLDTEKF-YTEVQEKILARYGKTF--DWSLKAKM--MGKKAIEAARIFVEESGLSDS--LSPE---DFLVE----R   66 (220)
T ss_pred             CCCcceecHHH-HHHHHHHHHHHcCCCC--CHHHHHHc--cCCCHHHHHHHHHHHhCCCCC--CCHH---HHHHH----H
Confidence            79999999996 8899999999999864  33444433  56655444443 333343210  1111   11111    1


Q ss_pred             HHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHH-HHHhcCCCCcccceEEeCC--CCCCCCCChHH
Q 024806          163 TELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAI-VSFLLGPERAEKIQIFAGD--VVPRKKPDPVK  239 (262)
Q Consensus       163 ~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~-L~~~~l~~~f~~~~Iv~s~--~~~~~KPdp~~  239 (262)
                      ..++.... . ...++||+.++|+.|+++|++++|+||+.+..+... ++..++.++|+  .+++++  +++..||+|++
T Consensus        67 ~~~~~~~~-~-~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~--~i~~~~~~~~~~~KP~p~~  142 (220)
T PLN02811         67 EAMLQDLF-P-TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMH--HVVTGDDPEVKQGKPAPDI  142 (220)
T ss_pred             HHHHHHHH-h-hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCC--EEEECChhhccCCCCCcHH
Confidence            11222211 1 367899999999999999999999999987655543 44456789999  899999  88999999999


Q ss_pred             Hhhhhhhhhhhhcc---cCCcccccC
Q 024806          240 ICSLTVDIVCNVLK---THAHKNVLV  262 (262)
Q Consensus       240 ~~~~~~~~a~~~lg---v~p~e~v~I  262 (262)
                      |     ..+++++|   ++|++|+||
T Consensus       143 ~-----~~a~~~~~~~~~~~~~~v~I  163 (220)
T PLN02811        143 F-----LAAARRFEDGPVDPGKVLVF  163 (220)
T ss_pred             H-----HHHHHHhCCCCCCccceEEE
Confidence            9     88889996   999999987

>PHA02597 30

Probab=99.73  E-value=4.2e-17  Score=132.62  Aligned_cols=146  Identities=12%  Similarity=0.106  Sum_probs=94.3

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHH-HHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |+|+||||+||||+|+..     ++.++++++|++.    +.+...  .+..... +...+.         .......++
T Consensus         1 m~k~viFDlDGTLiD~~~-----~~~~~~~~~g~~~----~~~~~~--~g~~~~~~~~~~~~---------~~~~~~~~~   60 (197)
T PHA02597          1 MKPTILTDVDGVLLSWQS-----GLPYFAQKYNIPT----DHILKM--IQDERFRDPGELFG---------CDQELAKKL   60 (197)
T ss_pred             CCcEEEEecCCceEchhh-----ccHHHHHhcCCCH----HHHHHH--HhHhhhcCHHHHhc---------ccHHHHHHH
Confidence            589999999999999554     4677788887642    333333  2322111 122111         112222333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCC----cccceEEeCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER----AEKIQIFAGDVV  230 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~----f~~~~Iv~s~~~  230 (262)
                      .+.+..       ... .....++||+.++|+.|+++ ++++++||.........++.+++..+    |+  .++++++ 
T Consensus        61 ~~~~~~-------~~~-~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~--~i~~~~~-  128 (197)
T PHA02597         61 IEKYNN-------SDF-IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFS--EVLMCGH-  128 (197)
T ss_pred             hhhhhH-------HHH-HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCccc--EEEEecc-
Confidence            333221       111 11367999999999999987 57889999876666667777777654    45  5677666 


Q ss_pred             CCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          231 PRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       231 ~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                        .||+|++|     ..+++++|  |+++|||
T Consensus       129 --~~~kp~~~-----~~a~~~~~--~~~~v~v  151 (197)
T PHA02597        129 --DESKEKLF-----IKAKEKYG--DRVVCFV  151 (197)
T ss_pred             --CcccHHHH-----HHHHHHhC--CCcEEEe
Confidence              36778999     88899999  8888876

2 hypothetical protein; Provisional

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.70  E-value=2.7e-16  Score=127.93  Aligned_cols=86  Identities=20%  Similarity=0.102  Sum_probs=68.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHH----hh-hhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKI----CS-LTVDIVC  249 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~----~~-~~~~~a~  249 (262)
                      ..++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|.  .++..++.+..||++...    .+ ..++.++
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~--~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~  156 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYS--NELVFDEKGFIQPDGIVRVTFDNKGEAVERLK  156 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEE--EEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence            6799999999999999999999999999999999999999988887  556665556666664210    00 1126678


Q ss_pred             hhcccCCcccccC
Q 024806          250 NVLKTHAHKNVLV  262 (262)
Q Consensus       250 ~~lgv~p~e~v~I  262 (262)
                      +++|++|++++||
T Consensus       157 ~~~~~~~~~~i~i  169 (201)
T TIGR01491       157 RELNPSLTETVAV  169 (201)
T ss_pred             HHhCCCHHHEEEE
Confidence            8899999999886

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.70  E-value=1.8e-16  Score=130.91  Aligned_cols=83  Identities=22%  Similarity=0.143  Sum_probs=68.5

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccc-----eEEeCC---CCCCCCCChHHHhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAGD---VVPRKKPDPVKICSLTVD  246 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~-----~Iv~s~---~~~~~KPdp~~~~~~~~~  246 (262)
                      .+++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|...     .++++.   .....+|+|.+|     +
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-----~  158 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTL-----L  158 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHH-----H
Confidence            679999999999999999999999999999999999999999988521     122222   112356789999     8


Q ss_pred             hhhhhcccCCcccccC
Q 024806          247 IVCNVLKTHAHKNVLV  262 (262)
Q Consensus       247 ~a~~~lgv~p~e~v~I  262 (262)
                      .+++++|++|++|+||
T Consensus       159 ~~~~~~~~~~~~~i~i  174 (219)
T TIGR00338       159 ILLRKEGISPENTVAV  174 (219)
T ss_pred             HHHHHcCCCHHHEEEE
Confidence            8899999999999986

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.60  E-value=1.5e-15  Score=117.83  Aligned_cols=83  Identities=20%  Similarity=0.193  Sum_probs=65.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH---------------HHHHHHHHHhcCCCCcccceEE-eCCCCCCCCCChH
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIF-AGDVVPRKKPDPV  238 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---------------~~~~~~L~~~~l~~~f~~~~Iv-~s~~~~~~KPdp~  238 (262)
                      +.++||+.++|+.|+++|++++|+||+++               ..+...++++++...+....+. .+++.+..||+|+
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~  105 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPG  105 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHH
Confidence            45789999999999999999999999873               5677788888875221100112 2455677899999


Q ss_pred             HHhhhhhhhhhhhcccCCcccccC
Q 024806          239 KICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       239 ~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|     +.+++++|++|++|+||
T Consensus       106 ~~-----~~~~~~~~~~~~e~i~I  124 (147)
T TIGR01656       106 LI-----LEALKRLGVDASRSLVV  124 (147)
T ss_pred             HH-----HHHHHHcCCChHHEEEE
Confidence            99     88999999999999986

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PLN02954 phosphoserine phosphatase

Probab=99.59  E-value=2.7e-14  Score=118.38  Aligned_cols=153  Identities=15%  Similarity=0.161  Sum_probs=92.6

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  153 (262)
                      +.+|+|+|||||||+|+.      .+.++++.+|....+ .+....+............. +...  .    ...     
T Consensus        10 ~~~k~viFDfDGTL~~~~------~~~~~~~~~g~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~--~----~~~-----   71 (224)
T PLN02954         10 RSADAVCFDVDSTVCVDE------GIDELAEFCGAGEAV-AEWTAKAMGGSVPFEEALAARLSLF--K----PSL-----   71 (224)
T ss_pred             ccCCEEEEeCCCcccchH------HHHHHHHHcCChHHH-HHHHHHHHCCCCCHHHHHHHHHHHc--C----CCH-----
Confidence            468999999999999974      357777777765322 12222221111122222111 2111  0    000     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC--CCcccceE------E
Q 024806          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP--ERAEKIQI------F  225 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~--~~f~~~~I------v  225 (262)
                        +    .    +.+.+......++||+.++|+.|+++|++++|+|++....++.+++.+|+.  .+|....+      +
T Consensus        72 --~----~----~~~~~~~~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~  141 (224)
T PLN02954         72 --S----Q----VEEFLEKRPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEY  141 (224)
T ss_pred             --H----H----HHHHHHHccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcE
Confidence              1    1    111111113568999999999999999999999999999999999999886  45642111      1


Q ss_pred             eCCC----CCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          226 AGDV----VPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       226 ~s~~----~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .+.+    ....+|+|+++     +.+++.+|.  ++++||
T Consensus       142 ~g~~~~~~~~~~~~K~~~i-----~~~~~~~~~--~~~i~i  175 (224)
T PLN02954        142 AGFDENEPTSRSGGKAEAV-----QHIKKKHGY--KTMVMI  175 (224)
T ss_pred             ECccCCCcccCCccHHHHH-----HHHHHHcCC--CceEEE
Confidence            1111    12346677888     666777775  577765

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.59  E-value=2.1e-14  Score=118.30  Aligned_cols=79  Identities=16%  Similarity=0.164  Sum_probs=68.5

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---cCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNV  251 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~---~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~  251 (262)
                      .+++||+.++|+.|+++|++++|+||++...+...+++.   ++.++|+  .++. ...+ .||+|++|     ..++++
T Consensus        94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~--~~fd-~~~g-~KP~p~~y-----~~i~~~  164 (220)
T TIGR01691        94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFS--GYFD-TTVG-LKTEAQSY-----VKIAGQ  164 (220)
T ss_pred             cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcc--eEEE-eCcc-cCCCHHHH-----HHHHHH
Confidence            579999999999999999999999999998888888876   5677887  5554 3334 69999999     889999


Q ss_pred             cccCCcccccC
Q 024806          252 LKTHAHKNVLV  262 (262)
Q Consensus       252 lgv~p~e~v~I  262 (262)
                      +|++|++++||
T Consensus       165 lgv~p~e~lfV  175 (220)
T TIGR01691       165 LGSPPREILFL  175 (220)
T ss_pred             hCcChhHEEEE
Confidence            99999999986

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.58  E-value=9.3e-15  Score=117.33  Aligned_cols=79  Identities=19%  Similarity=0.224  Sum_probs=65.0

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH---------------HHHHHHHHHhcCCCCcccceEEeC-----CCCCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG-----DVVPRKK  234 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---------------~~~~~~L~~~~l~~~f~~~~Iv~s-----~~~~~~K  234 (262)
                      +.++||+.++|+.|+++|++++|+||++.               ..+...++++|+  +|+  .++.+     ++++..|
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~--~i~~~~~~~~~~~~~~K  103 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLD--GIYYCPHHPEDGCDCRK  103 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccc--eEEECCCCCCCCCcCCC
Confidence            46889999999999999999999999973               344556777765  466  56543     4567899


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     ..+++.+|+.|++|+||
T Consensus       104 P~p~~~-----~~~~~~l~~~~~~~~~V  126 (181)
T PRK08942        104 PKPGML-----LSIAERLNIDLAGSPMV  126 (181)
T ss_pred             CCHHHH-----HHHHHHcCCChhhEEEE
Confidence            999999     88999999999999986

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.57  E-value=2.9e-14  Score=117.95  Aligned_cols=88  Identities=15%  Similarity=0.158  Sum_probs=67.7

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC--CcccceEEeCCCCCCCCCChHHHhh-----hhhh
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE--RAEKIQIFAGDVVPRKKPDPVKICS-----LTVD  246 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~--~f~~~~Iv~s~~~~~~KPdp~~~~~-----~~~~  246 (262)
                      ...++||+.++|+.|+++|++++|+||+....++.+++.+ +..  .+.....+.++.....||+|.+...     ..-.
T Consensus        72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~  150 (219)
T PRK09552         72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKP  150 (219)
T ss_pred             CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchH
Confidence            3789999999999999999999999999999999999987 543  3311144667777788999876310     0013


Q ss_pred             hhhhhcccCCcccccC
Q 024806          247 IVCNVLKTHAHKNVLV  262 (262)
Q Consensus       247 ~a~~~lgv~p~e~v~I  262 (262)
                      .+++.++.++++++||
T Consensus       151 ~~l~~~~~~~~~~i~i  166 (219)
T PRK09552        151 SLIRKLSDTNDFHIVI  166 (219)
T ss_pred             HHHHHhccCCCCEEEE
Confidence            5778899999999886

>PRK06769 hypothetical protein; Validated

Probab=99.55  E-value=2e-14  Score=114.58  Aligned_cols=81  Identities=9%  Similarity=-0.027  Sum_probs=65.3

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHH--------HHHHHHHHhcCCCCcccceEE-eCCCCCCCCCChHHHhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEK--------AVTAIVSFLLGPERAEKIQIF-AGDVVPRKKPDPVKICSLTV  245 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~--------~~~~~L~~~~l~~~f~~~~Iv-~s~~~~~~KPdp~~~~~~~~  245 (262)
                      ..++||+.++|+.|+++|++++|+||....        .....++.+|+.++|.  .+. .+++++..||+|++|     
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~~~~~~~~~~~KP~p~~~-----   99 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL--CPHKHGDGCECRKPSTGML-----   99 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE--CcCCCCCCCCCCCCCHHHH-----
Confidence            467899999999999999999999998741        2344466777666554  232 466778899999999     


Q ss_pred             hhhhhhcccCCcccccC
Q 024806          246 DIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       246 ~~a~~~lgv~p~e~v~I  262 (262)
                      ..+++++|++|++|+||
T Consensus       100 ~~~~~~l~~~p~~~i~I  116 (173)
T PRK06769        100 LQAAEKHGLDLTQCAVI  116 (173)
T ss_pred             HHHHHHcCCCHHHeEEE
Confidence            88999999999999986

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.54  E-value=3.8e-14  Score=112.01  Aligned_cols=77  Identities=14%  Similarity=0.190  Sum_probs=66.0

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHH------------HHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEK------------AVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLT  244 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~------------~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~  244 (262)
                      ++||+.++|+.|+++|++++|+||++..            .++.+++.+|+..  +  .++++++....||+|++|    
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~--~ii~~~~~~~~KP~p~~~----  114 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--Q--VLAATHAGLYRKPMTGMW----  114 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--E--EEEecCCCCCCCCccHHH----
Confidence            6899999999999999999999998753            5678899998843  3  566666666789999999    


Q ss_pred             hhhhhhhcc--cCCcccccC
Q 024806          245 VDIVCNVLK--THAHKNVLV  262 (262)
Q Consensus       245 ~~~a~~~lg--v~p~e~v~I  262 (262)
                       ..+++++|  ++|++++||
T Consensus       115 -~~~~~~~~~~~~~~~~v~V  133 (166)
T TIGR01664       115 -EYLQSQYNSPIKMTRSFYV  133 (166)
T ss_pred             -HHHHHHcCCCCCchhcEEE
Confidence             78899999  999999986

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.54  E-value=4.4e-14  Score=107.46  Aligned_cols=77  Identities=21%  Similarity=0.249  Sum_probs=65.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC--------HHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN--------EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVD  246 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~--------~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~  246 (262)
                      ..++||+.++|+.|+++|++++|+||+.        ...+...++++++.  |+  .++.+.  +..||+|++|     +
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~--~~~~~~--~~~KP~~~~~-----~   92 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--ID--VLYACP--HCRKPKPGMF-----L   92 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EE--EEEECC--CCCCCChHHH-----H
Confidence            3578999999999999999999999998        88899999999875  33  334433  5789999999     8


Q ss_pred             hhhhhc-ccCCcccccC
Q 024806          247 IVCNVL-KTHAHKNVLV  262 (262)
Q Consensus       247 ~a~~~l-gv~p~e~v~I  262 (262)
                      .+++++ +++|++++||
T Consensus        93 ~~~~~~~~~~~~~~v~I  109 (132)
T TIGR01662        93 EALKRFNEIDPEESVYV  109 (132)
T ss_pred             HHHHHcCCCChhheEEE
Confidence            889999 5999999986

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.53  E-value=5.8e-15  Score=116.91  Aligned_cols=81  Identities=11%  Similarity=0.003  Sum_probs=73.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHhcCC---------CCcccceEEeCCCCCCCCCChHHHhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTS-NEKAVTAIVSFLLGP---------ERAEKIQIFAGDVVPRKKPDPVKICSLT  244 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~-~~~~~~~~L~~~~l~---------~~f~~~~Iv~s~~~~~~KPdp~~~~~~~  244 (262)
                      ..++||+.++|+.|+++|++++|+||+ ....++..++.+++.         ++|+  .++++++....||+|.++    
T Consensus        44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd--~iv~~~~~~~~kp~~~i~----  117 (174)
T TIGR01685        44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFD--DRIEIYKPNKAKQLEMIL----  117 (174)
T ss_pred             EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhce--eeeeccCCchHHHHHHHH----
Confidence            679999999999999999999999999 888899999999998         9999  899998888889999988    


Q ss_pred             hhhhhhhc--ccCCcccccC
Q 024806          245 VDIVCNVL--KTHAHKNVLV  262 (262)
Q Consensus       245 ~~~a~~~l--gv~p~e~v~I  262 (262)
                       +.+.+.+  |+.|++|+||
T Consensus       118 -~~~~~~~~~gl~p~e~l~V  136 (174)
T TIGR01685       118 -QKVNKVDPSVLKPAQILFF  136 (174)
T ss_pred             -HHhhhcccCCCCHHHeEEE
Confidence             6666777  8999999986

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.50  E-value=1.4e-13  Score=110.05  Aligned_cols=79  Identities=13%  Similarity=0.133  Sum_probs=63.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH---------------HHHHHHHHHhcCCCCcccceEEeC-----------C
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG-----------D  228 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---------------~~~~~~L~~~~l~~~f~~~~Iv~s-----------~  228 (262)
                      +.++||+.++|+.|+++|++++|+||++.               ..+...++.+++.  |+  .++.+           +
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~--~i~~~~~~~~~~~~~~~  100 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LD--GIYYCPHHPEGVEEFRQ  100 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--cc--EEEECCCCCcccccccC
Confidence            56889999999999999999999999984               3444566666554  66  45432           3


Q ss_pred             CCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          229 VVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       229 ~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +.+..||+|++|     ..+++++|++|++|+||
T Consensus       101 ~~~~~KP~p~~~-----~~a~~~~~~~~~~~v~V  129 (176)
T TIGR00213       101 VCDCRKPKPGML-----LQARKELHIDMAQSYMV  129 (176)
T ss_pred             CCCCCCCCHHHH-----HHHHHHcCcChhhEEEE
Confidence            456789999999     88999999999999986

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.49  E-value=2.8e-13  Score=112.53  Aligned_cols=64  Identities=16%  Similarity=0.150  Sum_probs=56.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCC----CHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHH
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTS----NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKI  240 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~----~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~  240 (262)
                      ..+++++.++|+.|+++|++++++||.    .+..++.+++.+|+.++|+  .++++++....||+|..+
T Consensus       113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~--~i~~~d~~~~~Kp~~~~~  180 (237)
T TIGR01672       113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNP--VIFAGDKPGQYQYTKTQW  180 (237)
T ss_pred             CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhee--EEECCCCCCCCCCCHHHH
Confidence            456778999999999999999999998    6678889999999999998  889988888889988654

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.49  E-value=2.1e-13  Score=118.49  Aligned_cols=83  Identities=17%  Similarity=0.166  Sum_probs=67.5

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccc-----eEEeCC---CCCCCCCChHHHhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAGD---VVPRKKPDPVKICSLTVD  246 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~-----~Iv~s~---~~~~~KPdp~~~~~~~~~  246 (262)
                      .+++||+.++|+.|++.|++++|+|++.....+.+++.+++...+...     ..+++.   +....||+++.+     +
T Consensus       180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L-----~  254 (322)
T PRK11133        180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTL-----T  254 (322)
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHH-----H
Confidence            789999999999999999999999999988899999999886644311     222332   223568999999     8


Q ss_pred             hhhhhcccCCcccccC
Q 024806          247 IVCNVLKTHAHKNVLV  262 (262)
Q Consensus       247 ~a~~~lgv~p~e~v~I  262 (262)
                      .+++++|++|+++++|
T Consensus       255 ~la~~lgi~~~qtIaV  270 (322)
T PRK11133        255 RLAQEYEIPLAQTVAI  270 (322)
T ss_pred             HHHHHcCCChhhEEEE
Confidence            8899999999999875

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.48  E-value=6.4e-13  Score=108.57  Aligned_cols=81  Identities=15%  Similarity=0.104  Sum_probs=59.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC---CCCCCCChHHHhhhhhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV---VPRKKPDPVKICSLTVDIVCNV  251 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~---~~~~KPdp~~~~~~~~~~a~~~  251 (262)
                      .+++||+.++|+.|+++ ++++|+||+....++.+++++|+..+|... +...++   .+..+|.|...     ..+++.
T Consensus        67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~-~~~~~~~~i~~~~~~~p~~k-----~~~l~~  139 (205)
T PRK13582         67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHS-LEVDEDGMITGYDLRQPDGK-----RQAVKA  139 (205)
T ss_pred             CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcce-EEECCCCeEECccccccchH-----HHHHHH
Confidence            67899999999999999 999999999999999999999999888632 222111   12223334333     334556


Q ss_pred             cccCCcccccC
Q 024806          252 LKTHAHKNVLV  262 (262)
Q Consensus       252 lgv~p~e~v~I  262 (262)
                      ++..+++++||
T Consensus       140 ~~~~~~~~v~i  150 (205)
T PRK13582        140 LKSLGYRVIAA  150 (205)
T ss_pred             HHHhCCeEEEE
Confidence            77777888875

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.44  E-value=2.1e-12  Score=103.76  Aligned_cols=52  Identities=19%  Similarity=0.330  Sum_probs=48.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      .+++||+.++|+.|+++|++++|+||+....++..++.+++.++|+  .|++++
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~i~~~~  122 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI--EIYSNP  122 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee--EEeccC
Confidence            6899999999999999999999999999999999999999999998  788654

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.37  E-value=2.3e-12  Score=97.35  Aligned_cols=81  Identities=22%  Similarity=0.357  Sum_probs=71.6

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC----------------CCChH
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK----------------KPDPV  238 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~----------------KPdp~  238 (262)
                      ..+++|+.++|+.|+++|++++|+||+....++..++.+++..+|+  .+++++.....                ||++.
T Consensus        23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (139)
T cd01427          23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD--PVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD  100 (139)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh--heeccchhhhhcccccccccccccccCCCCHH
Confidence            6789999999999999999999999999999999999999988888  78877765544                99999


Q ss_pred             HHhhhhhhhhhhhcccCCcccccC
Q 024806          239 KICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       239 ~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .+     ..+.+.++..++++++|
T Consensus       101 ~~-----~~~~~~~~~~~~~~~~i  119 (139)
T cd01427         101 KL-----LAALKLLGVDPEEVLMV  119 (139)
T ss_pred             HH-----HHHHHHcCCChhhEEEe
Confidence            99     77888888888888765

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.35  E-value=8e-12  Score=102.98  Aligned_cols=88  Identities=14%  Similarity=0.171  Sum_probs=65.6

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcc-cceEEeCCCCCCCCCChHHHhh-----hhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE-KIQIFAGDVVPRKKPDPVKICS-----LTVDIV  248 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~-~~~Iv~s~~~~~~KPdp~~~~~-----~~~~~a  248 (262)
                      .+++||+.++|+.|+++|++++|+|++....++.+++.++..+++. ...++.++.....||+|..+..     .--..+
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~  148 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL  148 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence            6899999999999999999999999999999999999875444441 1145566666778899887620     000245


Q ss_pred             hhhcccCCcccccC
Q 024806          249 CNVLKTHAHKNVLV  262 (262)
Q Consensus       249 ~~~lgv~p~e~v~I  262 (262)
                      ++.++..+++++||
T Consensus       149 l~~~~~~~~~~i~i  162 (214)
T TIGR03333       149 IRKLSEPNDYHIVI  162 (214)
T ss_pred             HHHHhhcCCcEEEE
Confidence            66677778888775

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.31  E-value=1.8e-11  Score=99.70  Aligned_cols=82  Identities=11%  Similarity=0.021  Sum_probs=61.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC-C---------CCCCCChHHHhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV-V---------PRKKPDPVKICSLT  244 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~-~---------~~~KPdp~~~~~~~  244 (262)
                      ..++||+.++|+.++++|++++|+|++....++.+++.+|+..+|... +...++ .         ..++++...+    
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~-l~~~~~g~~~g~~~~~~~~g~~K~~~l----  160 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTR-LEESEDGIYTGNIDGNNCKGEGKVHAL----  160 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecc-eEEcCCCEEeCCccCCCCCChHHHHHH----
Confidence            468999999999999999999999999999999999999998888632 232121 1         1123333444    


Q ss_pred             hhhhhhhcccCCcccccC
Q 024806          245 VDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       245 ~~~a~~~lgv~p~e~v~I  262 (262)
                       +..++..|++++++++|
T Consensus       161 -~~~~~~~~~~~~~~~~~  177 (202)
T TIGR01490       161 -AELLAEEQIDLKDSYAY  177 (202)
T ss_pred             -HHHHHHcCCCHHHcEee
Confidence             66677889888888764

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.28  E-value=8.6e-12  Score=98.01  Aligned_cols=79  Identities=11%  Similarity=0.114  Sum_probs=68.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC---------------HHHHHHHHHHhcCCCCcccceE-Ee----CCCCCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQI-FA----GDVVPRKK  234 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~---------------~~~~~~~L~~~~l~~~f~~~~I-v~----s~~~~~~K  234 (262)
                      +.++||+.++|+.|+++|++++|+||.+               ...+..+++.+|+.  |+  .+ ++    +++.+..|
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd--~ii~~~~~~~~~~~~~K  103 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FD--DVLICPHFPDDNCDCRK  103 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--ee--EEEECCCCCCCCCCCCC
Confidence            5789999999999999999999999973               55778889999886  76  45 44    57888999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     +.+++++|++|++|+||
T Consensus       104 P~~~~~-----~~~~~~~~~~~~e~l~I  126 (161)
T TIGR01261       104 PKIKLL-----EPYLKKNLIDKARSYVI  126 (161)
T ss_pred             CCHHHH-----HHHHHHcCCCHHHeEEE
Confidence            999999     88899999999999986

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PRK11590 hypothetical protein; Provisional

Probab=99.25  E-value=8.9e-11  Score=96.54  Aligned_cols=127  Identities=17%  Similarity=0.064  Sum_probs=73.9

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHH-HHccCCCCCCHHHHHHHHHhCCCHHHHHHHH--H--hcCCCCCCCCcHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTF-KEKELGVTWDVDLYGELLKIGGGKERMTAYF--N--KTGWPEKAPSDEEE  150 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~  150 (262)
                      ..|++|||+||||++..   ...+|...+ +++|+... ..+.....  +|.+........  .  ..-|....+..++.
T Consensus         5 ~~k~~iFD~DGTL~~~d---~~~~~~~~~~~~~g~~~~-~~~~~~~~--ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~   78 (211)
T PRK11590          5 ERRVVFFDLDGTLHQQD---MFGSFLRYLLRRQPLNLL-LVLPLLPV--IGLGLLVKGRAARWPMSLLLWGCTFGHSEAR   78 (211)
T ss_pred             cceEEEEecCCCCcccc---hHHHHHHHHHHhcchhhH-HHhHHHHH--hccCcccchhhhhhhHHHHHHHHHcCCCHHH
Confidence            45799999999999433   345677766 77776532 22333333  333322211110  0  00000000112222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHH-HHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          151 RKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLI-DQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L-~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .+++.+.+    .+.|.+     ...++||+.++| +.|+++|++++|+||+.+..++.+++.+|+..
T Consensus        79 ~~~~~~~f----~~~~~~-----~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~  137 (211)
T PRK11590         79 LQALEADF----VRWFRD-----NVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP  137 (211)
T ss_pred             HHHHHHHH----HHHHHH-----hCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc
Confidence            23333332    222322     146799999999 67888999999999999999999999987643

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.25  E-value=8.2e-11  Score=94.00  Aligned_cols=160  Identities=14%  Similarity=0.092  Sum_probs=101.9

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHH----HH-HHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFN----DT-FKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEE  149 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~----~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (262)
                      +.++.++||+|+||+..... ...+.+    +. .+++|+...........++...+   ...+-+...|...       
T Consensus        13 ~~~~~l~FDiDdtLYp~St~-i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG---~t~aGL~~~~~~~-------   81 (244)
T KOG3109|consen   13 PNYKCLFFDIDDTLYPLSTG-IQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYG---LTMAGLKAVGYIF-------   81 (244)
T ss_pred             ccceEEEEecccccccCchh-HHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHh---HHHHHHHHhcccC-------
Confidence            36899999999999987764 444444    33 33467765422222222211111   1122222222110       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC
Q 024806          150 ERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV  229 (262)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~  229 (262)
                      +    ..++.+.+.+    ...-..+.+.+...++|-.|++++  ..+.||+.+..+.++|+.+|+.+.|+  .|++-+-
T Consensus        82 d----~deY~~~V~~----~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFe--gii~~e~  149 (244)
T KOG3109|consen   82 D----ADEYHRFVHG----RLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFE--GIICFET  149 (244)
T ss_pred             C----HHHHHHHhhc----cCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhcc--ceeEeec
Confidence            0    1122221111    111113778888999999998875  77899999999999999999999999  6666543


Q ss_pred             CC------CCCCChHHHhhhhhhhhhhhcccC-CcccccC
Q 024806          230 VP------RKKPDPVKICSLTVDIVCNVLKTH-AHKNVLV  262 (262)
Q Consensus       230 ~~------~~KPdp~~~~~~~~~~a~~~lgv~-p~e~v~I  262 (262)
                      ..      .-||++..|     +.+.+..|+. |..++|+
T Consensus       150 ~np~~~~~vcKP~~~af-----E~a~k~agi~~p~~t~Ff  184 (244)
T KOG3109|consen  150 LNPIEKTVVCKPSEEAF-----EKAMKVAGIDSPRNTYFF  184 (244)
T ss_pred             cCCCCCceeecCCHHHH-----HHHHHHhCCCCcCceEEE
Confidence            32      459999999     8899999998 9888874

>TIGR01686 FkbH FkbH-like domain

Probab=99.24  E-value=1.7e-11  Score=107.06  Aligned_cols=75  Identities=15%  Similarity=0.231  Sum_probs=67.7

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH----hcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhh
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF----LLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNV  251 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~----~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~  251 (262)
                      .+++|+.++|+.|+++|++++|+||++...+..+++.    +++.++|+  .+..+     +||+|+.+     ..+++.
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~--~~~~~-----~~pk~~~i-----~~~~~~   98 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD--ARSIN-----WGPKSESL-----RKIAKK   98 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee--EEEEe-----cCchHHHH-----HHHHHH
Confidence            3579999999999999999999999999999999999    89999998  55443     68999999     888999


Q ss_pred             cccCCcccccC
Q 024806          252 LKTHAHKNVLV  262 (262)
Q Consensus       252 lgv~p~e~v~I  262 (262)
                      +|+.|+++|||
T Consensus        99 l~i~~~~~vfi  109 (320)
T TIGR01686        99 LNLGTDSFLFI  109 (320)
T ss_pred             hCCCcCcEEEE
Confidence            99999999986

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.24  E-value=9.1e-11  Score=93.42  Aligned_cols=81  Identities=19%  Similarity=0.151  Sum_probs=60.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCC-C---CCC--CCCC------hHHHhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD-V---VPR--KKPD------PVKICS  242 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~-~---~~~--~KPd------p~~~~~  242 (262)
                      +.++||+.++|+.|+++|++++|+|++....++.+++.+|+..+|..  .+..+ +   .+.  .||.      +..+  
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~--~~~~~~~g~~~g~~~~~~~~~~~~K~~~l--  147 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFAN--RLEFDDNGLLTGPIEGQVNPEGECKGKVL--  147 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheee--eEEECCCCEEeCccCCcccCCcchHHHHH--
Confidence            67899999999999999999999999999999999999999887763  22221 1   110  1122      2333  


Q ss_pred             hhhhhhhhhcccCCcccccC
Q 024806          243 LTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       243 ~~~~~a~~~lgv~p~e~v~I  262 (262)
                         +..++.+|+.++++++|
T Consensus       148 ---~~~~~~~~~~~~~~~~i  164 (177)
T TIGR01488       148 ---KELLEESKITLKKIIAV  164 (177)
T ss_pred             ---HHHHHHhCCCHHHEEEE
Confidence               55677888888888775

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01684 viral_ppase viral phosphatase

Probab=99.24  E-value=4.5e-11  Score=100.82  Aligned_cols=60  Identities=10%  Similarity=0.091  Sum_probs=56.7

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHH
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKI  240 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~  240 (262)
                      ||+.++|+.|+++|+++||+||+.+..+...++.+|+..+|+  .|++++++...||+|+..
T Consensus       149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFd--vIIs~Gdv~~~kp~~e~~  208 (301)
T TIGR01684       149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFD--IIISGGHKAEEYSTMSTE  208 (301)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccC--EEEECCccccCCCCcccc
Confidence            889999999999999999999999999999999999999999  899999999999999743

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.23  E-value=8.5e-12  Score=94.42  Aligned_cols=75  Identities=11%  Similarity=0.126  Sum_probs=67.3

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCC-CHHHHHHHHHHhc-------CCCCcccceEEeCCCCCCCCCChHHHhhhhhhhh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTS-NEKAVTAIVSFLL-------GPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIV  248 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~-~~~~~~~~L~~~~-------l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a  248 (262)
                      ++||+.++|+.|+++|++++|+||+ ....+...++.++       +.++|+  .++++++    ||+|++|     ..+
T Consensus        30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~--~~~~~~~----~pkp~~~-----~~a   98 (128)
T TIGR01681        30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFD--PLTIGYW----LPKSPRL-----VEI   98 (128)
T ss_pred             HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhh--hhhhcCC----CcHHHHH-----HHH
Confidence            6799999999999999999999999 8888888899888       789998  7777754    5889999     788


Q ss_pred             hhhcc--cCCcccccC
Q 024806          249 CNVLK--THAHKNVLV  262 (262)
Q Consensus       249 ~~~lg--v~p~e~v~I  262 (262)
                      ++++|  +.|++|+||
T Consensus        99 ~~~lg~~~~p~~~l~i  114 (128)
T TIGR01681        99 ALKLNGVLKPKSILFV  114 (128)
T ss_pred             HHHhcCCCCcceEEEE
Confidence            99999  999999986

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.22  E-value=1.3e-11  Score=101.05  Aligned_cols=76  Identities=29%  Similarity=0.401  Sum_probs=64.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      .+++||+.++|+.|+++|++++++|+.+...+..+.+.+|+.+     .++.++..  .||++++|     ..+++.|++
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-----~~v~a~~~--~kP~~k~~-----~~~i~~l~~  193 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-----SIVFARVI--GKPEPKIF-----LRIIKELQV  193 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-----EEEEESHE--TTTHHHHH-----HHHHHHHTC
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-----cccccccc--ccccchhH-----HHHHHHHhc
Confidence            4678999999999999999999999999999999999998833     23333322  79999999     788999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      ++++++||
T Consensus       194 ~~~~v~~v  201 (215)
T PF00702_consen  194 KPGEVAMV  201 (215)
T ss_dssp             TGGGEEEE
T ss_pred             CCCEEEEE
Confidence            99999886

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.18  E-value=8e-11  Score=103.17  Aligned_cols=79  Identities=13%  Similarity=0.161  Sum_probs=65.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCC---------------CHHHHHHHHHHhcCCCCcccceEE-e----CCCCCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTS---------------NEKAVTAIVSFLLGPERAEKIQIF-A----GDVVPRKK  234 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~---------------~~~~~~~~L~~~~l~~~f~~~~Iv-~----s~~~~~~K  234 (262)
                      ..++||+.++|+.|+++|++++|+||.               ....+..+++.+++.  |+  .++ +    +++.+.+|
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd--~i~i~~~~~sd~~~~rK  104 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FD--EVLICPHFPEDNCSCRK  104 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--ee--eEEEeCCcCcccCCCCC
Confidence            568999999999999999999999995               345677788888773  66  444 3    35677899


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|.+|     ..+++.++++|++++||
T Consensus       105 P~p~~l-----~~a~~~l~v~~~~svmI  127 (354)
T PRK05446        105 PKTGLV-----EEYLAEGAIDLANSYVI  127 (354)
T ss_pred             CCHHHH-----HHHHHHcCCCcccEEEE
Confidence            999999     77888999999999986

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.18  E-value=1.2e-10  Score=106.88  Aligned_cols=77  Identities=17%  Similarity=0.173  Sum_probs=66.4

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCH------------HHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNE------------KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLT  244 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~------------~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~  244 (262)
                      ++||+.+.|+.|++.|++++|+||...            ..+..+++.+|+.  |+  .+++.++...+||+|.++    
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fd--viia~~~~~~RKP~pGm~----  269 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQ--VFIAIGAGFYRKPLTGMW----  269 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eE--EEEeCCCCCCCCCCHHHH----
Confidence            689999999999999999999999876            4578889999874  77  778877778899999999    


Q ss_pred             hhhhhhhc----ccCCcccccC
Q 024806          245 VDIVCNVL----KTHAHKNVLV  262 (262)
Q Consensus       245 ~~~a~~~l----gv~p~e~v~I  262 (262)
                       ..+++.+    ++++++++||
T Consensus       270 -~~a~~~~~~~~~Id~~~S~~V  290 (526)
T TIGR01663       270 -DHLKEEANDGTEIQEDDCFFV  290 (526)
T ss_pred             -HHHHHhcCcccCCCHHHeEEe
Confidence             6777777    4899999987

Note that the EC number for the kinase function is: 2.7.1.78

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.16  E-value=4.1e-10  Score=92.44  Aligned_cols=84  Identities=19%  Similarity=0.065  Sum_probs=62.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC-------CCCCCCChHHHhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV-------VPRKKPDPVKICSLTVDI  247 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~-------~~~~KPdp~~~~~~~~~~  247 (262)
                      ..++||+.++++.|+++|++++|+|++....++.+.+.+|+...+..  ....++       .+..-...  -....++.
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an--~l~~~dG~ltG~v~g~~~~~~--~K~~~l~~  151 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN--ELEIDDGKLTGRVVGPICDGE--GKAKALRE  151 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee--EEEEeCCEEeceeeeeecCcc--hHHHHHHH
Confidence            68999999999999999999999999999999999999999988873  333333       11111100  11223367


Q ss_pred             hhhhcccCCcccccC
Q 024806          248 VCNVLKTHAHKNVLV  262 (262)
Q Consensus       248 a~~~lgv~p~e~v~I  262 (262)
                      .++.+|+++++++.+
T Consensus       152 ~~~~~g~~~~~~~a~  166 (212)
T COG0560         152 LAAELGIPLEETVAY  166 (212)
T ss_pred             HHHHcCCCHHHeEEE
Confidence            788899988888754

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.14  E-value=8.7e-11  Score=91.16  Aligned_cols=77  Identities=13%  Similarity=0.122  Sum_probs=69.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC-CcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~-~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ..++||+.++|+.|+ ++++++|+||+.+..++.+++++++.. +|+  .|++++++...||+   |     ..+++++|
T Consensus        44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~--~i~~~~d~~~~KP~---~-----~k~l~~l~  112 (148)
T smart00577       44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGY--RRLFRDECVFVKGK---Y-----VKDLSLLG  112 (148)
T ss_pred             EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEee--eEEECccccccCCe---E-----eecHHHcC
Confidence            578999999999998 579999999999999999999998865 457  89999999999997   6     66889999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|++||||
T Consensus       113 ~~p~~~i~i  121 (148)
T smart00577      113 RDLSNVIII  121 (148)
T ss_pred             CChhcEEEE
Confidence            999999986

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.14  E-value=6e-10  Score=90.92  Aligned_cols=64  Identities=17%  Similarity=0.083  Sum_probs=50.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEE------eCCCCCCCCCChHHH
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF------AGDVVPRKKPDPVKI  240 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv------~s~~~~~~KPdp~~~  240 (262)
                      ++++||+.++|+.|++.| +++|+|++....++.+++.+|+..+|.....+      ++... ..||++..+
T Consensus        67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~  136 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQS  136 (203)
T ss_pred             CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeee-cCcchHHHH
Confidence            689999999999999985 99999999999999999999999888642222      22211 456666665

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.11  E-value=2.6e-11  Score=95.85  Aligned_cols=63  Identities=16%  Similarity=0.032  Sum_probs=55.9

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      -++.|+++|++++|+||.+...++..++.+|+.++|+  .+         ||+|++|     +.+++++|++|+++++|
T Consensus        42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~--~~---------kpkp~~~-----~~~~~~l~~~~~ev~~i  104 (169)
T TIGR02726        42 GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE--GI---------KKKTEPY-----AQMLEEMNISDAEVCYV  104 (169)
T ss_pred             HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe--cC---------CCCHHHH-----HHHHHHcCcCHHHEEEE
Confidence            3567788999999999999999999999999998886  22         7999999     88899999999999886

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.08  E-value=5.7e-10  Score=85.70  Aligned_cols=68  Identities=24%  Similarity=0.232  Sum_probs=57.7

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcc
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHK  258 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e  258 (262)
                      |.+.+.+..++++|+++.|+||+.+..+....+.+|+. |.          .+..||.+..|     +.|++.++++|++
T Consensus        49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~-fi----------~~A~KP~~~~f-----r~Al~~m~l~~~~  112 (175)
T COG2179          49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP-FI----------YRAKKPFGRAF-----RRALKEMNLPPEE  112 (175)
T ss_pred             HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc-ee----------ecccCccHHHH-----HHHHHHcCCChhH
Confidence            44456667888999999999999999999999998652 22          25689999999     9999999999999


Q ss_pred             cccC
Q 024806          259 NVLV  262 (262)
Q Consensus       259 ~v~I  262 (262)
                      |+||
T Consensus       113 vvmV  116 (175)
T COG2179         113 VVMV  116 (175)
T ss_pred             EEEE
Confidence            9997

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.07  E-value=8.1e-11  Score=91.94  Aligned_cols=63  Identities=16%  Similarity=0.112  Sum_probs=56.4

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|+.|+++|++++|+||.+...+...++.+|+.++|+  .         .||+|+++     ..+++.+|+.|++|+||
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~--~---------~~~k~~~~-----~~~~~~~~~~~~~~~~v   98 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQ--G---------QSNKLIAF-----SDILEKLALAPENVAYI   98 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEe--c---------ccchHHHH-----HHHHHHcCCCHHHEEEE
Confidence            7889999999999999999999999999999888876  2         27889999     78899999999999886

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.03  E-value=2.5e-10  Score=97.85  Aligned_cols=78  Identities=10%  Similarity=0.060  Sum_probs=58.9

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHhcCCCCcccceEE---eCCCCCCCCCChHHHhhhhhhhhhhhc
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAV-TAIVSFLLGPERAEKIQIF---AGDVVPRKKPDPVKICSLTVDIVCNVL  252 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~-~~~L~~~~l~~~f~~~~Iv---~s~~~~~~KPdp~~~~~~~~~~a~~~l  252 (262)
                      .|+|+.++++.|+++|+ ++|+||.+.... ...+...+...+|+  .+.   ..+....+||+|.+|     +.+++++
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~--~i~~~~g~~~~~~gKP~p~~~-----~~~~~~~  215 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVA--AIETASGRQPLVVGKPSPYMF-----ECITENF  215 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHH--HHHHHhCCceeccCCCCHHHH-----HHHHHHh
Confidence            48899999999998887 789999985433 12233445556666  343   234456789999999     8889999


Q ss_pred             ccCCcccccC
Q 024806          253 KTHAHKNVLV  262 (262)
Q Consensus       253 gv~p~e~v~I  262 (262)
                      |++|++++||
T Consensus       216 ~~~~~~~lmI  225 (279)
T TIGR01452       216 SIDPARTLMV  225 (279)
T ss_pred             CCChhhEEEE
Confidence            9999999997

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.02  E-value=1.5e-09  Score=90.29  Aligned_cols=62  Identities=16%  Similarity=0.140  Sum_probs=51.6

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCC----CHHHHHHHHHHhcC--CCCcccceEEeCCCCCCCCCChHHH
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTS----NEKAVTAIVSFLLG--PERAEKIQIFAGDVVPRKKPDPVKI  240 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~----~~~~~~~~L~~~~l--~~~f~~~~Iv~s~~~~~~KPdp~~~  240 (262)
                      ..++||+.++|+.|+++|++++++||.    ....++.+++.+|+  .++|+  .++++++.  .||++...
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~--vil~gd~~--~K~~K~~~  180 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNP--VIFAGDKP--GQYTKTQW  180 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCccccee--EEEcCCCC--CCCCHHHH
Confidence            678999999999999999999999995    35577777778999  88998  78887763  78887654

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.01  E-value=1.2e-08  Score=86.34  Aligned_cols=89  Identities=11%  Similarity=0.112  Sum_probs=71.9

Q ss_pred             HHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceE------EeCCCCCCCCCCh---
Q 024806          167 MVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI------FAGDVVPRKKPDP---  237 (262)
Q Consensus       167 ~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~I------v~s~~~~~~KPdp---  237 (262)
                      .+.+.+..+.+.||+.++++.|+++|++++|+|++....++.+|+++|+.+.+.  .|      +..+.+-.+||+|   
T Consensus       112 ~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~--~IvSN~L~f~~dGvltG~~~P~i~  189 (277)
T TIGR01544       112 KEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV--KVVSNFMDFDEDGVLKGFKGPLIH  189 (277)
T ss_pred             HHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc--eEEeeeEEECCCCeEeCCCCCccc
Confidence            333433458999999999999999999999999999999999999998877776  56      5555555678998   


Q ss_pred             ------HHHhhhhhhhhhhhcc--cCCcccccC
Q 024806          238 ------VKICSLTVDIVCNVLK--THAHKNVLV  262 (262)
Q Consensus       238 ------~~~~~~~~~~a~~~lg--v~p~e~v~I  262 (262)
                            .++     ..+++.++  ..++++|+|
T Consensus       190 ~~~K~~~v~-----~~~~~~~~~~~~~~~vI~v  217 (277)
T TIGR01544       190 TFNKNHDVA-----LRNTEYFNQLKDRSNIILL  217 (277)
T ss_pred             ccccHHHHH-----HHHHHHhCccCCcceEEEE
Confidence                  555     56788888  788888875

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=98.98  E-value=2.7e-10  Score=96.50  Aligned_cols=79  Identities=6%  Similarity=-0.124  Sum_probs=65.8

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCC---CCCCChHHHhhhhhhhhhhhcc
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP---RKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~---~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      .|+++.+.++.|++.|++++|+||.+.......+..+|+..+|+  .+..+....   ..||+|++|     +.+++++|
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~--~i~~~~~~~~~~~gKP~p~~~-----~~~~~~~~  193 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVT--ALEYATDTKATVVGKPSKTFF-----LEALRATG  193 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHH--HHHHHhCCCceeecCCCHHHH-----HHHHHHhC
Confidence            46889999999999999999999998777766777778888887  666554433   379999999     88899999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|++++||
T Consensus       194 ~~~~~~~~v  202 (257)
T TIGR01458       194 CEPEEAVMI  202 (257)
T ss_pred             CChhhEEEE
Confidence            999999986

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=98.94  E-value=8.7e-09  Score=85.28  Aligned_cols=52  Identities=19%  Similarity=0.344  Sum_probs=47.8

Q ss_pred             CCCCCccHHHHHHHH--HHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeC
Q 024806          174 LLPLRPGVAKLIDQA--LEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L--~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s  227 (262)
                      .+++.||+.++++.+  .+.|+.+.|+|++..-+++.+|++.|+.+.|+  .|++.
T Consensus        69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~--~I~TN  122 (234)
T PF06888_consen   69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS--EIFTN  122 (234)
T ss_pred             cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc--eEEeC
Confidence            389999999999999  45799999999999999999999999999998  67775

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PRK08238 hypothetical protein; Validated

Probab=98.93  E-value=3e-08  Score=90.75  Aligned_cols=62  Identities=21%  Similarity=0.259  Sum_probs=55.4

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHH
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKI  240 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~  240 (262)
                      ..+.+||+.++|+.++++|++++|+||+++..++.+++++|+   |+  .++++++....||+++..
T Consensus        70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd--~Vigsd~~~~~kg~~K~~  131 (479)
T PRK08238         70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FD--GVFASDGTTNLKGAAKAA  131 (479)
T ss_pred             hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CC--EEEeCCCccccCCchHHH
Confidence            367889999999999999999999999999999999999976   88  899999887888877653

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=98.89  E-value=6.4e-08  Score=79.44  Aligned_cols=46  Identities=15%  Similarity=-0.016  Sum_probs=39.0

Q ss_pred             CCCCccHHHHHH-HHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcc
Q 024806          175 LPLRPGVAKLID-QALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (262)
Q Consensus       175 ~~~~pgv~e~L~-~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~  220 (262)
                      ..++||+.++|+ .++++|++++|+||+....++.+.+..++....+
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~  139 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN  139 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc
Confidence            367999999996 8888999999999999999999998866655443

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.87  E-value=9.1e-09  Score=87.05  Aligned_cols=51  Identities=20%  Similarity=0.148  Sum_probs=47.0

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCC
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP  231 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~  231 (262)
                      ||+.++|+.|+++|++++|+||+++..+...++.+|+.++|+  .|+++++..
T Consensus       151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFD--vII~~g~i~  201 (303)
T PHA03398        151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFD--IIICGGRKA  201 (303)
T ss_pred             hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcccc--EEEECCCcc
Confidence            888899999999999999999999999999999999999999  788887643

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=98.85  E-value=5.8e-09  Score=82.82  Aligned_cols=72  Identities=17%  Similarity=0.142  Sum_probs=59.9

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN-EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~-~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ..++||+.++|+.|+++|++++|+||++ ...+..+++.+++..+           .+..||+|++|     ..+++++|
T Consensus        42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-----------~~~~KP~p~~~-----~~~l~~~~  105 (170)
T TIGR01668        42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-----------PHAVKPPGCAF-----RRAHPEMG  105 (170)
T ss_pred             CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-----------cCCCCCChHHH-----HHHHHHcC
Confidence            4678999999999999999999999998 5777777776654321           13469999999     88899999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|++++||
T Consensus       106 ~~~~~~l~I  114 (170)
T TIGR01668       106 LTSEQVAVV  114 (170)
T ss_pred             CCHHHEEEE
Confidence            999999986

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.85  E-value=4.9e-09  Score=90.73  Aligned_cols=81  Identities=16%  Similarity=0.129  Sum_probs=72.3

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC-CcccceEEeCC-------CCCCCCCChHHHhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGD-------VVPRKKPDPVKICSLTVD  246 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~-~f~~~~Iv~s~-------~~~~~KPdp~~~~~~~~~  246 (262)
                      ..++||+.++|+.|+++|++++++||.+....+..++.+++.+ +|+  .+++.+       +.+..||+|+++     .
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~~~~~~~~~~~~kp~p~~~-----~  258 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPPDMHFQREQGDKRPDDVVK-----E  258 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcchhhhcccCCCCCCcHHHH-----H
Confidence            4689999999999999999999999999999999999999997 998  788877       456789999999     7


Q ss_pred             hhhhhccc-CCcccccC
Q 024806          247 IVCNVLKT-HAHKNVLV  262 (262)
Q Consensus       247 ~a~~~lgv-~p~e~v~I  262 (262)
                      .++++++. .|++|+||
T Consensus       259 ~~l~~~~~~~~~~~~~v  275 (300)
T PHA02530        259 EIFWEKIAPKYDVLLAV  275 (300)
T ss_pred             HHHHHHhccCceEEEEE
Confidence            78888888 57999886

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=98.81  E-value=2e-07  Score=81.38  Aligned_cols=86  Identities=10%  Similarity=0.054  Sum_probs=66.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-c-------CCCCcccceEEeCCCC----------------
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-L-------GPERAEKIQIFAGDVV----------------  230 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~-~-------l~~~f~~~~Iv~s~~~----------------  230 (262)
                      +...||+.++|+.|+++|++++|+||++...++..++.+ |       +.++||  .|+++..-                
T Consensus       183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD--~IIt~a~KP~FF~~~~pf~~v~~~  260 (343)
T TIGR02244       183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFD--VVIVDARKPGFFTEGRPFRQVDVE  260 (343)
T ss_pred             hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCc--EEEeCCCCCcccCCCCceEEEeCC
Confidence            667999999999999999999999999999999999997 6       889999  78876641                


Q ss_pred             -CCCCCCh-------HHHhhhhhhhhhhhcccCCcccccC
Q 024806          231 -PRKKPDP-------VKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       231 -~~~KPdp-------~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                       +..++..       .+|..=.+....+.+|+.+++++||
T Consensus       261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYv  300 (343)
T TIGR02244       261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYF  300 (343)
T ss_pred             CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEE
Confidence             1122222       2444334466778888888888875

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.71  E-value=1.7e-08  Score=79.51  Aligned_cols=77  Identities=18%  Similarity=0.292  Sum_probs=51.0

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeC-CCHHHHHHHHHHhcCC----------CCcccceEEeCCCCCCCCCChHHHhh
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCST-SNEKAVTAIVSFLLGP----------ERAEKIQIFAGDVVPRKKPDPVKICS  242 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn-~~~~~~~~~L~~~~l~----------~~f~~~~Iv~s~~~~~~KPdp~~~~~  242 (262)
                      .+.+||++.++|+.|+++|++++++|- ...+.+..+|+.+++.          ++|+...|..+       ....-|  
T Consensus        43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g-------sK~~Hf--  113 (169)
T PF12689_consen   43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPG-------SKTTHF--  113 (169)
T ss_dssp             EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS--------HHHHH--
T ss_pred             EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecC-------chHHHH--
Confidence            378999999999999999999999994 4567999999999999          88884222221       334556  


Q ss_pred             hhhhhhhhhcccCCcccccC
Q 024806          243 LTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       243 ~~~~~a~~~lgv~p~e~v~I  262 (262)
                         +.+.+..|++.++.+|+
T Consensus       114 ---~~i~~~tgI~y~eMlFF  130 (169)
T PF12689_consen  114 ---RRIHRKTGIPYEEMLFF  130 (169)
T ss_dssp             ---HHHHHHH---GGGEEEE
T ss_pred             ---HHHHHhcCCChhHEEEe
Confidence               66778999988887763

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.68  E-value=2.8e-07  Score=77.96  Aligned_cols=62  Identities=18%  Similarity=0.166  Sum_probs=46.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHH
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKI  240 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~  240 (262)
                      ..++||+.++|+.|+++|++++++||...   ......|+.+|+..++.. .++..++ +  +|.+.-+
T Consensus       117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-~lllr~~-~--~~K~~rr  181 (266)
T TIGR01533       117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-HLLLKKD-K--SSKESRR  181 (266)
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-eEEeCCC-C--CCcHHHH
Confidence            67899999999999999999999999874   445578888888765532 5666653 3  3444555

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.65  E-value=4.9e-08  Score=78.33  Aligned_cols=51  Identities=24%  Similarity=0.393  Sum_probs=47.6

Q ss_pred             CCCCccHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeC
Q 024806          175 LPLRPGVAKLIDQALEKGV-KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~-~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s  227 (262)
                      ++..||+.++++.+++.|. .+.|+|+.+.-+++.+|+++++.+.|.  .|++.
T Consensus        83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~--~IfTN  134 (256)
T KOG3120|consen   83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS--EIFTN  134 (256)
T ss_pred             CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH--HHhcC
Confidence            8999999999999999985 999999999999999999999999999  67764

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=98.57  E-value=4.3e-08  Score=82.66  Aligned_cols=78  Identities=14%  Similarity=-0.001  Sum_probs=51.5

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHH--H-HHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA--I-VSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVL  252 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~--~-L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~l  252 (262)
                      ..|+.+.+.+..|+ +|.+ .|+||.+......  . ...-.+...++  ...+.+.+...||+|++|     +.+++.+
T Consensus       121 ~~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~--~~~~~~~~~~gKP~~~~~-----~~~~~~~  191 (249)
T TIGR01457       121 IDYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLE--VATGVKPVYIGKPNAIIM-----EKAVEHL  191 (249)
T ss_pred             CCHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHH--HHhCCCccccCCChHHHH-----HHHHHHc
Confidence            34566666777774 5777 7889987543311  0 01111122233  345556667789999999     8899999


Q ss_pred             ccCCcccccC
Q 024806          253 KTHAHKNVLV  262 (262)
Q Consensus       253 gv~p~e~v~I  262 (262)
                      |++|++++||
T Consensus       192 ~~~~~~~~~V  201 (249)
T TIGR01457       192 GTEREETLMV  201 (249)
T ss_pred             CCCcccEEEE
Confidence            9999999986

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=98.51  E-value=8.7e-07  Score=69.16  Aligned_cols=80  Identities=14%  Similarity=0.106  Sum_probs=59.7

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---cCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhh
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCN  250 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~---~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~  250 (262)
                      ..++||++.+.|++.+++|++++|.|.++...+.....+-   .+..+|+  ..+.- .. -.|-...-|     ..++.
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfs--GyfDt-ti-G~KrE~~SY-----~kIa~  171 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFS--GYFDT-TI-GKKRESQSY-----AKIAG  171 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhc--ceeec-cc-cccccchhH-----HHHHH
Confidence            3689999999999999999999999999988777766542   3333444  22222 22 256777888     77788


Q ss_pred             hcccCCcccccC
Q 024806          251 VLKTHAHKNVLV  262 (262)
Q Consensus       251 ~lgv~p~e~v~I  262 (262)
                      ..|+.|.|.+|+
T Consensus       172 ~iGl~p~eilFL  183 (229)
T COG4229         172 DIGLPPAEILFL  183 (229)
T ss_pred             hcCCCchheEEe
Confidence            899999988764

>PLN02645 phosphoglycolate phosphatase

Probab=98.51  E-value=9.3e-08  Score=83.24  Aligned_cols=74  Identities=11%  Similarity=0.028  Sum_probs=52.1

Q ss_pred             HHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHhcCCCCcccceEEeCCCCC---CCCCChHHHhhhhhhhhhhhcccCCc
Q 024806          182 AKLIDQALEKGVKVAVCSTSNEKA-VTAIVSFLLGPERAEKIQIFAGDVVP---RKKPDPVKICSLTVDIVCNVLKTHAH  257 (262)
Q Consensus       182 ~e~L~~L~~~G~~l~IvTn~~~~~-~~~~L~~~~l~~~f~~~~Iv~s~~~~---~~KPdp~~~~~~~~~~a~~~lgv~p~  257 (262)
                      ......|+.++-.++|+||.+... ....+...|...+|+  .+.++....   .+||+|.+|     +.+++++|++++
T Consensus       176 ~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~--~i~~~~~~~~~~~gKP~p~~~-----~~a~~~~~~~~~  248 (311)
T PLN02645        176 QYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVG--AIKGSTEREPLVVGKPSTFMM-----DYLANKFGIEKS  248 (311)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHH--HHHHHhCCCcccCCCChHHHH-----HHHHHHcCCCcc
Confidence            334556654334678999998543 233445567777887  666655432   359999999     888999999999


Q ss_pred             ccccC
Q 024806          258 KNVLV  262 (262)
Q Consensus       258 e~v~I  262 (262)
                      +++||
T Consensus       249 ~~~~V  253 (311)
T PLN02645        249 QICMV  253 (311)
T ss_pred             cEEEE
Confidence            99987

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.50  E-value=4.9e-07  Score=70.90  Aligned_cols=76  Identities=21%  Similarity=0.379  Sum_probs=52.0

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCC---H-----------HHHHHHHHHhcCCCCcccceEEeC-CCCCCCCCChHHHh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSN---E-----------KAVTAIVSFLLGPERAEKIQIFAG-DVVPRKKPDPVKIC  241 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~---~-----------~~~~~~L~~~~l~~~f~~~~Iv~s-~~~~~~KPdp~~~~  241 (262)
                      +.|++.+.|+.|.+.||.++|+||-.   .           ..++.+++.+++.  +   .++.+ ..-..+||.+-|+ 
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~---~~~~a~~~d~~RKP~~GM~-  103 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I---QVYAAPHKDPCRKPNPGMW-  103 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E---EEEECGCSSTTSTTSSHHH-
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e---EEEecCCCCCCCCCchhHH-
Confidence            44689999999999999999999982   2           4455666667554  2   23333 3337899999999 


Q ss_pred             hhhhhhhhhhcc----cCCcccccC
Q 024806          242 SLTVDIVCNVLK----THAHKNVLV  262 (262)
Q Consensus       242 ~~~~~~a~~~lg----v~p~e~v~I  262 (262)
                          +.+++.+.    ++.++++||
T Consensus       104 ----~~~~~~~~~~~~id~~~Sf~V  124 (159)
T PF08645_consen  104 ----EFALKDYNDGVEIDLANSFYV  124 (159)
T ss_dssp             ----HHHCCCTSTT--S-CCC-EEE
T ss_pred             ----HHHHHhccccccccccceEEE
Confidence                66666665    477887775

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.49  E-value=2.9e-06  Score=66.98  Aligned_cols=44  Identities=20%  Similarity=0.329  Sum_probs=41.5

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .+.+-||+.+++..|+++|.+++++|++.+..++.+-..+|+..
T Consensus        86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~  129 (227)
T KOG1615|consen   86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPK  129 (227)
T ss_pred             CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence            47899999999999999999999999999999999999998866

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.47  E-value=2.1e-07  Score=78.08  Aligned_cols=76  Identities=14%  Similarity=0.074  Sum_probs=59.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHH--HHHHHhcCCC-CcccceEEeCCCCCCCCCChHHHhhhhhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVT--AIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNV  251 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~--~~L~~~~l~~-~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~  251 (262)
                      ..++||+.++|+.|+++|++++++||+++....  ..|+.+|+.. +|+  .|++++++..     ..+     ..++++
T Consensus        23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~--~Ii~s~~~~~-----~~l-----~~~~~~   90 (242)
T TIGR01459        23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPE--MIISSGEIAV-----QMI-----LESKKR   90 (242)
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccc--eEEccHHHHH-----HHH-----Hhhhhh
Confidence            467999999999999999999999999887666  7899999987 899  8899886432     233     445566


Q ss_pred             cccCCcccccC
Q 024806          252 LKTHAHKNVLV  262 (262)
Q Consensus       252 lgv~p~e~v~I  262 (262)
                      +|..|.++++|
T Consensus        91 ~~~~~~~~~~v  101 (242)
T TIGR01459        91 FDIRNGIIYLL  101 (242)
T ss_pred             ccCCCceEEEe
Confidence            66666666654

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PTZ00445 p36-lilke protein; Provisional

Probab=98.46  E-value=8.8e-07  Score=71.37  Aligned_cols=82  Identities=16%  Similarity=0.252  Sum_probs=58.4

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHH---------------HHHHHHHHhcCCCCcccceEEeCC-----------C
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEK---------------AVTAIVSFLLGPERAEKIQIFAGD-----------V  229 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~---------------~~~~~L~~~~l~~~f~~~~Iv~s~-----------~  229 (262)
                      .+-|+...++..|++.|++++|||=++..               .++..|+.-+-.--..  .+++..           .
T Consensus        75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~--~~~~yyp~~w~~p~~y~~  152 (219)
T PTZ00445         75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIK--KVYAYYPKFWQEPSDYRP  152 (219)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceee--eeeeeCCcccCChhhhhh
Confidence            35677888999999999999999988753               5777777432222121  232211           2


Q ss_pred             CCCCCCChHH--HhhhhhhhhhhhcccCCcccccC
Q 024806          230 VPRKKPDPVK--ICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       230 ~~~~KPdp~~--~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++..||+|.+  |- +  +.+++++|+.|+|++||
T Consensus       153 ~gl~KPdp~iK~yH-l--e~ll~~~gl~peE~LFI  184 (219)
T PTZ00445        153 LGLDAPMPLDKSYH-L--KQVCSDFNVNPDEILFI  184 (219)
T ss_pred             hcccCCCccchHHH-H--HHHHHHcCCCHHHeEee
Confidence            3788999999  71 1  55789999999999986

>PRK10444 UMP phosphatase; Provisional

Probab=98.40  E-value=9e-08  Score=80.56  Aligned_cols=33  Identities=24%  Similarity=0.313  Sum_probs=27.1

Q ss_pred             EeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          225 FAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       225 v~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .+.+.....||+|++|     +.+++.++++|++++||
T Consensus       165 ~g~~~~~~gKP~~~~~-----~~~~~~~~~~~~~~v~I  197 (248)
T PRK10444        165 SGRKPFYVGKPSPWII-----RAALNKMQAHSEETVIV  197 (248)
T ss_pred             hCCCccccCCCCHHHH-----HHHHHHcCCCcccEEEE
Confidence            3334445679999999     88899999999999987

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=98.34  E-value=7.8e-06  Score=64.01  Aligned_cols=54  Identities=19%  Similarity=0.359  Sum_probs=47.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      +.+.||..++++..+++++++.|+|++....+..+++.+++.+..+.+.|++.+
T Consensus        72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~  125 (220)
T COG4359          72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNN  125 (220)
T ss_pred             cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecC
Confidence            678999999999999999999999999999999999999877777755555544

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=98.24  E-value=1.4e-06  Score=69.92  Aligned_cols=41  Identities=24%  Similarity=0.357  Sum_probs=36.2

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      |++.++|+.++++|++++|+|++....++.+++.+|+...+
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~  132 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN  132 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE
Confidence            55559999999999999999999999999999998877643

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.16  E-value=3.8e-07  Score=76.51  Aligned_cols=77  Identities=14%  Similarity=0.172  Sum_probs=63.5

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceE--EeCCCCCCCCCChHHHhhhhhhhhhhhcccC
Q 024806          178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI--FAGDVVPRKKPDPVKICSLTVDIVCNVLKTH  255 (262)
Q Consensus       178 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~I--v~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~  255 (262)
                      ++++.++++.|+++|+++ |+||.+.......+..++...+|.  .+  .+.+....+||+|.+|     +.+++++|+.
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~--~i~~~g~~~~~~gKP~~~~~-----~~~~~~~~~~  211 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAE--LIKQLGGKVIYSGKPYPAIF-----HKALKECSNI  211 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHH--HHHHhCCcEecCCCCCHHHH-----HHHHHHcCCC
Confidence            789999999999899997 889999887777777777777776  44  5666656899999999     8889999975


Q ss_pred             -CcccccC
Q 024806          256 -AHKNVLV  262 (262)
Q Consensus       256 -p~e~v~I  262 (262)
                       +++++||
T Consensus       212 ~~~~~~~v  219 (242)
T TIGR01459       212 PKNRMLMV  219 (242)
T ss_pred             CcccEEEE
Confidence             5689886

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.08  E-value=5.3e-06  Score=65.27  Aligned_cols=77  Identities=9%  Similarity=0.096  Sum_probs=66.1

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC-CcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~-~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ....||+.++|+.|.+. +.++|.|++.+..++.+++.++... +|+  .+++.++....||.   |     ...++.+|
T Consensus        41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~--~~l~r~~~~~~~~~---~-----~K~L~~l~  109 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS--RRLYRESCVFTNGK---Y-----VKDLSLVG  109 (162)
T ss_pred             EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe--EEEEccccEEeCCC---E-----EeEchhcC
Confidence            56789999999999988 9999999999999999999998766 888  78888877666665   5     55688899


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      .+++++|+|
T Consensus       110 ~~~~~vIiV  118 (162)
T TIGR02251       110 KDLSKVIII  118 (162)
T ss_pred             CChhhEEEE
Confidence            988998876

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.04  E-value=1.5e-05  Score=68.15  Aligned_cols=40  Identities=18%  Similarity=0.186  Sum_probs=34.4

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       180 gv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      ++.++|+.|+++|++++++|+.+...+...++.+++..+|
T Consensus        25 ~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~   64 (273)
T PRK00192         25 PAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF   64 (273)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence            3457788889999999999999999999999999887655

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.01  E-value=2.4e-05  Score=61.53  Aligned_cols=64  Identities=19%  Similarity=0.180  Sum_probs=38.9

Q ss_pred             HHHHHHHHHCCC--eEEEEeCC-------CHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhc
Q 024806          182 AKLIDQALEKGV--KVAVCSTS-------NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVL  252 (262)
Q Consensus       182 ~e~L~~L~~~G~--~l~IvTn~-------~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~l  252 (262)
                      .+.++.+++.+.  ++.|+||+       ....++.+-+.+|+. .+-         ....||..  +     +.+.+.+
T Consensus        65 ~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-vl~---------h~~kKP~~--~-----~~i~~~~  127 (168)
T PF09419_consen   65 AEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-VLR---------HRAKKPGC--F-----REILKYF  127 (168)
T ss_pred             HHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-EEE---------eCCCCCcc--H-----HHHHHHH
Confidence            344455555554  59999998       467788888888642 221         23578843  3     3334444


Q ss_pred             c-----cCCcccccC
Q 024806          253 K-----THAHKNVLV  262 (262)
Q Consensus       253 g-----v~p~e~v~I  262 (262)
                      +     .+|+|.+||
T Consensus       128 ~~~~~~~~p~eiavI  142 (168)
T PF09419_consen  128 KCQKVVTSPSEIAVI  142 (168)
T ss_pred             hhccCCCCchhEEEE
Confidence            3     358888876

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.99  E-value=6.2e-05  Score=63.97  Aligned_cols=76  Identities=11%  Similarity=-0.038  Sum_probs=43.5

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCH-----HHHHHHHHHhcCCC---CcccceEEeCCCCCCCCCChHHHhhhhhhhh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNE-----KAVTAIVSFLLGPE---RAEKIQIFAGDVVPRKKPDPVKICSLTVDIV  248 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~-----~~~~~~L~~~~l~~---~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a  248 (262)
                      .++++.++++.++..+..+.++++...     ...+.+.+.+++..   +++...+.. .  +..|  +..+     +.+
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~-~--~~~K--~~~l-----~~l  207 (272)
T PRK10530        138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIAR-K--GNSK--GKRL-----TQW  207 (272)
T ss_pred             ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEec-C--CCCh--HHHH-----HHH
Confidence            457788888888777777777777542     22333334443321   111000111 1  1223  3455     788


Q ss_pred             hhhcccCCcccccC
Q 024806          249 CNVLKTHAHKNVLV  262 (262)
Q Consensus       249 ~~~lgv~p~e~v~I  262 (262)
                      ++.+|++++++++|
T Consensus       208 ~~~~gi~~~e~i~~  221 (272)
T PRK10530        208 VEAQGWSMKNVVAF  221 (272)
T ss_pred             HHHcCCCHHHeEEe
Confidence            99999999999875

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=97.96  E-value=2.3e-05  Score=66.32  Aligned_cols=76  Identities=14%  Similarity=0.079  Sum_probs=48.8

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-hcCCCCcccceEEeCCCC-----CCCCCChHHHh--hhhh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSF-LLGPERAEKIQIFAGDVV-----PRKKPDPVKIC--SLTV  245 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~---~~~~~~L~~-~~l~~~f~~~~Iv~s~~~-----~~~KPdp~~~~--~~~~  245 (262)
                      ++||+.++|+.|+++|.++.++||++.   +.+...|+. .++....+  .|++|.+.     ...+|...+|.  .-++
T Consensus        25 ~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~--~i~TS~~at~~~l~~~~~~~kv~viG~~~l  102 (269)
T COG0647          25 AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPD--DIVTSGDATADYLAKQKPGKKVYVIGEEGL  102 (269)
T ss_pred             cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHH--HeecHHHHHHHHHHhhCCCCEEEEECCcch
Confidence            568999999999999999999999964   334455555 44545566  68887643     23344445553  2222


Q ss_pred             hhhhhhccc
Q 024806          246 DIVCNVLKT  254 (262)
Q Consensus       246 ~~a~~~lgv  254 (262)
                      ...++.+|+
T Consensus       103 ~~~l~~~G~  111 (269)
T COG0647         103 KEELEGAGF  111 (269)
T ss_pred             HHHHHhCCc
Confidence            334444553

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=97.96  E-value=9e-06  Score=62.12  Aligned_cols=62  Identities=16%  Similarity=0.102  Sum_probs=50.3

Q ss_pred             HHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          185 IDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       185 L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+.|.+.|++++|+|+.....++...+.+|+..+|.     +.+      -.-..|     +..++++++.++|+.||
T Consensus        44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~q-----G~~------dK~~a~-----~~L~~~~~l~~e~~ayi  105 (170)
T COG1778          44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQ-----GIS------DKLAAF-----EELLKKLNLDPEEVAYV  105 (170)
T ss_pred             HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeee-----chH------hHHHHH-----HHHHHHhCCCHHHhhhh
Confidence            556778899999999999999999999999987775     111      124566     77899999999999875

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.95  E-value=2.8e-05  Score=64.48  Aligned_cols=35  Identities=14%  Similarity=0.095  Sum_probs=23.0

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +.|+.|+++|++++++|+.+...+...++.+++..
T Consensus        27 ~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (230)
T PRK01158         27 EAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG   61 (230)
T ss_pred             HHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence            45556666777777777777666666666665543

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.94  E-value=1.4e-05  Score=64.08  Aligned_cols=63  Identities=14%  Similarity=0.104  Sum_probs=53.5

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .++.|+++|++++|+||.....+..+++.+|+..+|+  .         .++.++.+     +.+++.+|++|+|++||
T Consensus        56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~--g---------~~~k~~~l-----~~~~~~~gl~~~ev~~V  118 (183)
T PRK09484         56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ--G---------QSNKLIAF-----SDLLEKLAIAPEQVAYI  118 (183)
T ss_pred             HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec--C---------CCcHHHHH-----HHHHHHhCCCHHHEEEE
Confidence            5667788999999999999999999999998877774  1         24557788     88899999999999986

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.93  E-value=0.00018  Score=59.42  Aligned_cols=52  Identities=17%  Similarity=0.098  Sum_probs=41.9

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHhcCCCCcccceEEeCC
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~---~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      ..++.|++.++++.|+++|+++.++|+.+...   ....|...|...+ +  .++...
T Consensus       118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~--~LiLR~  172 (229)
T TIGR01675       118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-K--HLILRG  172 (229)
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-C--eeeecC
Confidence            46899999999999999999999999998666   6677777776655 4  455543

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=97.87  E-value=0.0001  Score=58.57  Aligned_cols=79  Identities=15%  Similarity=0.195  Sum_probs=60.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC---------------HHHHHHHHHHhcCCCCcccceEEe-CC----CCCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQIFA-GD----VVPRKK  234 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~---------------~~~~~~~L~~~~l~~~f~~~~Iv~-s~----~~~~~K  234 (262)
                      +.+.||+.+.|..|++.||+++|+||.+               ...+...|+..|+  .|+  .|+. ..    ....+|
T Consensus        30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id--~i~~Cph~p~~~c~cRK  105 (181)
T COG0241          30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KID--GILYCPHHPEDNCDCRK  105 (181)
T ss_pred             hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccc--eEEECCCCCCCCCcccC
Confidence            5688999999999999999999999942               2334445555554  566  3433 22    246899


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |.|.++     +.+++.+++++....+|
T Consensus       106 P~~gm~-----~~~~~~~~iD~~~s~~V  128 (181)
T COG0241         106 PKPGML-----LSALKEYNIDLSRSYVV  128 (181)
T ss_pred             CChHHH-----HHHHHHhCCCccceEEe
Confidence            999999     88899999999988876

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.82  E-value=9.3e-05  Score=62.93  Aligned_cols=36  Identities=22%  Similarity=0.175  Sum_probs=30.9

Q ss_pred             HHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       182 ~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .+.|+.|+++|++++++|+.+...+...++.+++..
T Consensus        26 ~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (270)
T PRK10513         26 KQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ   61 (270)
T ss_pred             HHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence            366778889999999999999999999999887753

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=97.77  E-value=8.1e-05  Score=63.44  Aligned_cols=18  Identities=28%  Similarity=0.512  Sum_probs=15.3

Q ss_pred             CCcEEEEecCccccccCc
Q 024806           76 LPSALLFDCDGVLVDTEK   93 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~   93 (262)
                      |+|.++||+||||++...
T Consensus         1 m~kli~~DlDGTLl~~~~   18 (272)
T PRK15126          1 MARLAAFDMDGTLLMPDH   18 (272)
T ss_pred             CccEEEEeCCCcCcCCCC
Confidence            489999999999997543

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=97.69  E-value=0.00013  Score=59.97  Aligned_cols=38  Identities=16%  Similarity=0.204  Sum_probs=29.7

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       180 gv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      ...+.|+.|+++|++++++|+.+...+...++.+++..
T Consensus        22 ~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~   59 (215)
T TIGR01487        22 RAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG   59 (215)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence            34466778888899999999998888888888876653

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK10976 putative hydrolase; Provisional

Probab=97.68  E-value=0.00013  Score=61.97  Aligned_cols=18  Identities=22%  Similarity=0.408  Sum_probs=15.3

Q ss_pred             CCcEEEEecCccccccCc
Q 024806           76 LPSALLFDCDGVLVDTEK   93 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~   93 (262)
                      |+|.|+||+||||++...
T Consensus         1 mikli~~DlDGTLl~~~~   18 (266)
T PRK10976          1 MYQVVASDLDGTLLSPDH   18 (266)
T ss_pred             CceEEEEeCCCCCcCCCC
Confidence            379999999999997654

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.66  E-value=0.00014  Score=61.72  Aligned_cols=37  Identities=24%  Similarity=0.187  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       181 v~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +.+.|+.++++|++++++|+.+-..+..+++.+++..
T Consensus        25 ~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~   61 (264)
T COG0561          25 TKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG   61 (264)
T ss_pred             HHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence            3366667788899999999998888888888887766

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.65  E-value=0.00015  Score=58.51  Aligned_cols=40  Identities=15%  Similarity=0.264  Sum_probs=27.3

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHH-------HHHHHHHHh
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEK-------AVTAIVSFL  213 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~-------~~~~~L~~~  213 (262)
                      .++++||+.|+|+.|.+.|+.+.++|..+..       .....|++.
T Consensus        71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~h  117 (191)
T PF06941_consen   71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERH  117 (191)
T ss_dssp             T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHH
Confidence            3789999999999999999888888777533       334555554

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=97.59  E-value=4.2e-05  Score=63.96  Aligned_cols=27  Identities=26%  Similarity=0.426  Sum_probs=23.5

Q ss_pred             CCCCCChHHHhhhhhhhhhhhcccCCccc-ccC
Q 024806          231 PRKKPDPVKICSLTVDIVCNVLKTHAHKN-VLV  262 (262)
Q Consensus       231 ~~~KPdp~~~~~~~~~~a~~~lgv~p~e~-v~I  262 (262)
                      ...||+|++|     +.++++++++++++ +||
T Consensus       185 ~~~KP~~~~~-----~~~~~~~~~~~~~~~~~I  212 (236)
T TIGR01460       185 VVGKPSPAIY-----RAALNLLQARPERRDVMV  212 (236)
T ss_pred             eecCCCHHHH-----HHHHHHhCCCCccceEEE
Confidence            3679999999     88999999999888 775

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.56  E-value=0.00019  Score=59.74  Aligned_cols=46  Identities=26%  Similarity=0.245  Sum_probs=37.1

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHHhcCCCCcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSFLLGPERAE  220 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---~~~~~~L~~~~l~~~f~  220 (262)
                      .++.||+.++++.++++|++|.++||.+.   .....-|+..|...+-.
T Consensus       114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~  162 (229)
T PF03767_consen  114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDH  162 (229)
T ss_dssp             GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSC
T ss_pred             CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccch
Confidence            47899999999999999999999999854   45566677777655443

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.56  E-value=0.00028  Score=60.21  Aligned_cols=39  Identities=5%  Similarity=0.031  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       181 v~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      +.+.|+.|+++|++++++|+.....+..+.+.+++.++|
T Consensus        23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~   61 (302)
T PRK12702         23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPF   61 (302)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeE
Confidence            346778889999999999999999999999999887644

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=97.56  E-value=0.0014  Score=55.33  Aligned_cols=52  Identities=17%  Similarity=0.096  Sum_probs=39.0

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHhcCCCCcccceEEeCC
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~---~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      ..++.||+.++.+.|+++|+++.++||.+...   ....|+..|...+ +  .++..+
T Consensus       143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~--~LiLR~  197 (275)
T TIGR01680       143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-E--KLILKD  197 (275)
T ss_pred             cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-c--eeeecC
Confidence            37889999999999999999999999998543   4445555666554 3  455543

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>COG4996 Predicted phosphatase [General function prediction only]

Probab=97.51  E-value=0.00025  Score=52.61  Aligned_cols=80  Identities=19%  Similarity=0.098  Sum_probs=60.8

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHh---hhhh-hhhh
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKIC---SLTV-DIVC  249 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~---~~~~-~~a~  249 (262)
                      ...++|.+.++++.++..|+-++..|=+...-+...|+.+++..||+  .++.       +|+|.-++   ++.. ..+-
T Consensus        39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFh--y~Vi-------ePhP~K~~ML~~llr~i~~e  109 (164)
T COG4996          39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFH--YIVI-------EPHPYKFLMLSQLLREINTE  109 (164)
T ss_pred             EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEE--EEEe-------cCCChhHHHHHHHHHHHHHh
Confidence            37899999999999999999999999998899999999999999998  5554       45555443   1111 1223


Q ss_pred             hhcccCCcccccC
Q 024806          250 NVLKTHAHKNVLV  262 (262)
Q Consensus       250 ~~lgv~p~e~v~I  262 (262)
                      +...+.|.+.||+
T Consensus       110 r~~~ikP~~Ivy~  122 (164)
T COG4996         110 RNQKIKPSEIVYL  122 (164)
T ss_pred             hccccCcceEEEE
Confidence            4455678877763

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=97.46  E-value=0.00075  Score=57.23  Aligned_cols=26  Identities=12%  Similarity=0.276  Sum_probs=24.0

Q ss_pred             CCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          232 RKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       232 ~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .+||++.++     +.+.++++++|++++||
T Consensus       222 ~GKP~~~m~-----~~l~~~~~i~psRt~mv  247 (306)
T KOG2882|consen  222 LGKPSTFMF-----EYLLEKFNIDPSRTCMV  247 (306)
T ss_pred             cCCCCHHHH-----HHHHHHcCCCcceEEEE
Confidence            479999999     88899999999999997

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.40  E-value=0.00041  Score=54.13  Aligned_cols=54  Identities=17%  Similarity=0.197  Sum_probs=46.5

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC-CCcccceEEeCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP-ERAEKIQIFAGDVV  230 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~-~~f~~~~Iv~s~~~  230 (262)
                      ..++||+.++|+.|++. ++++|+|++.+..+..+++.++.. .+|.. .|++.++.
T Consensus        57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~-ri~~rd~~  111 (156)
T TIGR02250        57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGD-RIISRDES  111 (156)
T ss_pred             EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeecc-EEEEeccC
Confidence            67899999999999966 999999999999999999999887 48831 67777764

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=97.35  E-value=0.00042  Score=49.95  Aligned_cols=52  Identities=17%  Similarity=0.254  Sum_probs=39.1

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhcCCCCcccceEEeCCC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPERAEKIQIFAGDV  229 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~L~~~~l~~~f~~~~Iv~s~~  229 (262)
                      .++||+.++|+.|+++|.++.++||++   +......|+.+|+.--.+  .|+++..
T Consensus        14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~--~i~ts~~   68 (101)
T PF13344_consen   14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDED--EIITSGM   68 (101)
T ss_dssp             EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GG--GEEEHHH
T ss_pred             CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcC--EEEChHH
Confidence            478999999999999999999999995   345666778888875554  6887653

...

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.30  E-value=0.0002  Score=62.64  Aligned_cols=27  Identities=30%  Similarity=0.464  Sum_probs=20.2

Q ss_pred             EEEEecCccccccCcchHHHHHHHHHHHc
Q 024806           79 ALLFDCDGVLVDTEKDGHRISFNDTFKEK  107 (262)
Q Consensus        79 ~viFD~DGTL~d~~~~~~~~a~~~~~~~~  107 (262)
                      +++||+||||+++... +. .+.++++.+
T Consensus         2 ~~ifD~DGvL~~g~~~-i~-ga~eal~~L   28 (321)
T TIGR01456         2 GFAFDIDGVLFRGKKP-IA-GASDALRRL   28 (321)
T ss_pred             EEEEeCcCceECCccc-cH-HHHHHHHHH
Confidence            6899999999999885 43 455555543

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>smart00775 LNS2 LNS2 domain

Probab=97.24  E-value=0.0021  Score=50.20  Aligned_cols=36  Identities=25%  Similarity=0.303  Sum_probs=30.2

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHH---HHHHH
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVT---AIVSF  212 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~---~~L~~  212 (262)
                      ..|++.++++.|+++|+++.++|+.+...+.   ..++.
T Consensus        28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~   66 (157)
T smart00775       28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ   66 (157)
T ss_pred             CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence            3589999999999999999999999877664   56655

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.24  E-value=0.0011  Score=56.55  Aligned_cols=34  Identities=18%  Similarity=0.191  Sum_probs=30.2

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      +.|+.|+++|++++++|+.+...+...++.+++.
T Consensus        31 ~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~   64 (271)
T PRK03669         31 PWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             HHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence            5677888999999999999999999999999874

>PTZ00174 phosphomannomutase; Provisional

Probab=97.23  E-value=0.00097  Score=56.10  Aligned_cols=29  Identities=17%  Similarity=0.274  Sum_probs=20.2

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVS  211 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~  211 (262)
                      +.|+.|+++|++++++|+.+...+...++
T Consensus        29 ~ai~~l~~~Gi~~viaTGR~~~~i~~~l~   57 (247)
T PTZ00174         29 DTLAKLKSKGFKIGVVGGSDYPKIKEQLG   57 (247)
T ss_pred             HHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence            55666777888888888887665555554

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=97.23  E-value=0.00077  Score=55.55  Aligned_cols=33  Identities=15%  Similarity=0.222  Sum_probs=21.7

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcC
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l  215 (262)
                      +.|+.|+++|++++++|+.+...+..+++.+++
T Consensus        22 ~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~   54 (225)
T TIGR01482        22 EAIRKAESVGIPVVLVTGNSVQFARALAKLIGT   54 (225)
T ss_pred             HHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence            445566667777777777776666666666653

catalyze the same reaction as SPP.

>PLN02887 hydrolase family protein

Probab=97.22  E-value=0.0013  Score=61.92  Aligned_cols=35  Identities=31%  Similarity=0.431  Sum_probs=30.3

Q ss_pred             HHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       182 ~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      .+.|+.|+++|++++|+|+.+...+...++.+++.
T Consensus       331 ~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~  365 (580)
T PLN02887        331 AKALKEALSRGVKVVIATGKARPAVIDILKMVDLA  365 (580)
T ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence            36777889999999999999999998899888764

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=97.14  E-value=0.001  Score=53.46  Aligned_cols=35  Identities=14%  Similarity=0.301  Sum_probs=28.0

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVS  211 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~  211 (262)
                      ..||+.|.|+.|++++.++=.+||...+.-+.+.+
T Consensus        24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~   58 (262)
T KOG3040|consen   24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHE   58 (262)
T ss_pred             cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHH
Confidence            67999999999998889999999996554444433

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=97.14  E-value=0.0014  Score=55.24  Aligned_cols=34  Identities=26%  Similarity=0.253  Sum_probs=19.5

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      +.|+.|+++|++++++|+.+...+...++.+++.
T Consensus        23 ~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   56 (256)
T TIGR00099        23 EALAKLREKGIKVVLATGRPYKEVKNILKELGLD   56 (256)
T ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            4445555566666666666655555555555443

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.13  E-value=0.0031  Score=53.22  Aligned_cols=48  Identities=21%  Similarity=0.212  Sum_probs=42.9

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCC
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      |.+.+.|..|+++|.-+++=|-++++.+...++.+++.++|+  .|+++.
T Consensus       145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd--~ii~~G  192 (297)
T PF05152_consen  145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFD--IIICGG  192 (297)
T ss_pred             hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccE--EEEeCC
Confidence            556677889999999999999999999999999999999999  777654

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=97.13  E-value=0.0008  Score=63.33  Aligned_cols=46  Identities=24%  Similarity=0.231  Sum_probs=43.7

Q ss_pred             CCCCccHHHHHHHHHHCC-CeEEEEeCCCHHHHHHHHHHhcCCCCcc
Q 024806          175 LPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G-~~l~IvTn~~~~~~~~~L~~~~l~~~f~  220 (262)
                      ..++||+.++|+.|+++| ++++|+||.+...++.+++++|+.++|.
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~  429 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHA  429 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeec
Confidence            578999999999999999 9999999999999999999999988886

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=97.10  E-value=0.00067  Score=63.54  Aligned_cols=46  Identities=20%  Similarity=0.144  Sum_probs=43.5

Q ss_pred             CCCCccHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHhcCCCCcc
Q 024806          175 LPLRPGVAKLIDQALEKGV-KVAVCSTSNEKAVTAIVSFLLGPERAE  220 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~-~l~IvTn~~~~~~~~~L~~~~l~~~f~  220 (262)
                      -+++||+.++|+.|+++|+ +++++||.+...++.+++++|+.++|.
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~  407 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHA  407 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhh
Confidence            4689999999999999999 999999999999999999999988886

.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=97.06  E-value=0.0014  Score=54.28  Aligned_cols=38  Identities=16%  Similarity=0.272  Sum_probs=32.1

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      |...+.|+.|+++|++++++|+.+...+..+++.+++.
T Consensus        18 ~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~   55 (254)
T PF08282_consen   18 PETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID   55 (254)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred             HHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence            34457777888899999999999999999999988765

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=97.03  E-value=0.0023  Score=60.62  Aligned_cols=35  Identities=11%  Similarity=0.058  Sum_probs=29.4

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +.|+.|+++|++++++|+.+...+...++.+++.+
T Consensus       440 eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~  474 (694)
T PRK14502        440 DALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD  474 (694)
T ss_pred             HHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence            56677888999999999999888888888887644

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=96.99  E-value=0.0029  Score=47.45  Aligned_cols=74  Identities=16%  Similarity=0.175  Sum_probs=44.4

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHH---------------HHHHHHHhcCCCCcccceEEeCCC----CCC----C
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKA---------------VTAIVSFLLGPERAEKIQIFAGDV----VPR----K  233 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~---------------~~~~L~~~~l~~~f~~~~Iv~s~~----~~~----~  233 (262)
                      +.+++.+.|+.|+++|+.+.++|+.+...               ....|++.++ +| |  .++.+..    -+.    .
T Consensus        25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~i-pY-d--~l~~~kp~~~~~~~~~dD~  100 (126)
T TIGR01689        25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNV-PY-D--EIYVGKPWCGHDGFYVDDR  100 (126)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCC-CC-c--eEEeCCCcCCCCCceecch
Confidence            45677788889999999999999987553               3455555544 33 3  3433321    011    1


Q ss_pred             CCChHHHhhhhhhhhhhhccc
Q 024806          234 KPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      -=.|+.|.++..+.+.+.++.
T Consensus       101 ~ir~~~~~~~~~~~~~~~~~~  121 (126)
T TIGR01689       101 AIRPSEFSSLTYDEINTLTKI  121 (126)
T ss_pred             hhCHHHHHhcCHHHHHHHHhh
Confidence            123556666665666666654

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=96.69  E-value=0.0023  Score=60.37  Aligned_cols=42  Identities=21%  Similarity=0.263  Sum_probs=39.6

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      .+++||+.++|+.|+++|++++++||..+..++.+++.+|+.
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~  445 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN  445 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence            468999999999999999999999999999999999999884

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PLN02645 phosphoglycolate phosphatase

Probab=96.42  E-value=0.0077  Score=52.47  Aligned_cols=50  Identities=20%  Similarity=0.203  Sum_probs=41.5

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhcCCCCcccceEEeCC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      ++||+.++|+.|+++|++++++||++   .......|+.+|+...++  .|+++.
T Consensus        45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~--~I~ts~   97 (311)
T PLN02645         45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEE--EIFSSS   97 (311)
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChh--hEeehH
Confidence            67999999999999999999999997   455555667888877776  778775

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=96.32  E-value=0.077  Score=49.19  Aligned_cols=36  Identities=17%  Similarity=0.114  Sum_probs=26.7

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hcCC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGP  216 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~-~~l~  216 (262)
                      +.|.+.+   .++++|.. +|+|.+.+..++.+.+. +|++
T Consensus       111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid  147 (497)
T PLN02177        111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGAD  147 (497)
T ss_pred             cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCC
Confidence            5565554   44567755 99999999999999976 6654

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=96.19  E-value=0.0096  Score=59.20  Aligned_cols=54  Identities=22%  Similarity=0.443  Sum_probs=48.7

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP  231 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~  231 (262)
                      +++||+.++++.|++.|+++.++|+.....+..+.+.+|+.+.++  .++++++..
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~v~g~~l~  581 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTS--QSVSGEKLD  581 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCC--ceeEhHHhH
Confidence            789999999999999999999999999999999999999988887  667766553

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=96.00  E-value=0.017  Score=49.19  Aligned_cols=36  Identities=8%  Similarity=0.012  Sum_probs=28.2

Q ss_pred             CccHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHh
Q 024806          178 RPGVAKLIDQALE-KGVKVAVCSTSNEKAVTAIVSFL  213 (262)
Q Consensus       178 ~pgv~e~L~~L~~-~G~~l~IvTn~~~~~~~~~L~~~  213 (262)
                      .+.+.+.|+.|.+ .|+.++|+|+.+...+..+++.+
T Consensus        38 ~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~   74 (266)
T PRK10187         38 PDNILQGLQLLATANDGALALISGRSMVELDALAKPY   74 (266)
T ss_pred             CHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence            3566677888887 68999999999988887777654

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=95.94  E-value=0.13  Score=42.14  Aligned_cols=52  Identities=15%  Similarity=0.096  Sum_probs=30.2

Q ss_pred             eCCCHHHHHHHHHHhcCC----CCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          199 STSNEKAVTAIVSFLLGP----ERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       199 Tn~~~~~~~~~L~~~~l~----~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++.....+...++..++.    .+|.  .|...+   ..|+.  ..     +.+++.+|++++++++|
T Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~--ei~~~~---~~Kg~--al-----~~l~~~lgi~~~~vi~~  201 (221)
T TIGR02463       146 SDSRMPRFTALLADLGLAIVQGNRFS--HVLGAS---SSKGK--AA-----NWLKATYNQPDVKTLGL  201 (221)
T ss_pred             chhHHHHHHHHHHHcCCeEEecCCee--EEecCC---CCHHH--HH-----HHHHHHhCCCCCcEEEE
Confidence            444445555666665543    3332  233322   23444  33     77899999999998865

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=95.92  E-value=0.07  Score=41.47  Aligned_cols=74  Identities=14%  Similarity=0.182  Sum_probs=45.9

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHHh--cCCCCcccceEEeC-CCC------CCCCCChHHHhhhh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAV---TAIVSFL--LGPERAEKIQIFAG-DVV------PRKKPDPVKICSLT  244 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~---~~~L~~~--~l~~~f~~~~Iv~s-~~~------~~~KPdp~~~~~~~  244 (262)
                      .++|+.++...+.++||++.-+|..+....   +..|+..  +...+.+. -++.+ +..      ..-.++|+.|....
T Consensus        28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G-pv~~sP~~l~~al~rEvi~~~p~~fK~~~  106 (157)
T PF08235_consen   28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG-PVLLSPDSLFSALHREVISKDPEEFKIAC  106 (157)
T ss_pred             hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC-CEEECCcchhhhhhccccccChHHHHHHH
Confidence            458999999999999999999999974333   3444444  22244443 24444 210      12245788887555


Q ss_pred             hhhhhhh
Q 024806          245 VDIVCNV  251 (262)
Q Consensus       245 ~~~a~~~  251 (262)
                      +..+...
T Consensus       107 L~~l~~~  113 (157)
T PF08235_consen  107 LRDLRAL  113 (157)
T ss_pred             HHHHHHh
Confidence            5555554

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PRK10671 copA copper exporting ATPase; Provisional

Probab=95.82  E-value=0.014  Score=57.77  Aligned_cols=70  Identities=17%  Similarity=0.194  Sum_probs=54.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      -+++||+.+.|+.|+++|++++++|+.....++.+.+.+|+.++|.  .+         .|...       ..+.+.++.
T Consensus       649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~--~~---------~p~~K-------~~~i~~l~~  710 (834)
T PRK10671        649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIA--GV---------LPDGK-------AEAIKRLQS  710 (834)
T ss_pred             CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEe--CC---------CHHHH-------HHHHHHHhh
Confidence            3679999999999999999999999999999999999999977664  21         13222       224566677


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      ++++++||
T Consensus       711 ~~~~v~~v  718 (834)
T PRK10671        711 QGRQVAMV  718 (834)
T ss_pred             cCCEEEEE
Confidence            77777764

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=95.75  E-value=0.042  Score=45.42  Aligned_cols=47  Identities=15%  Similarity=0.140  Sum_probs=37.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHH----HHHHHHHhcCCCCccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA----VTAIVSFLLGPERAEK  221 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~----~~~~L~~~~l~~~f~~  221 (262)
                      ..+.||+.|++++..++|.+|.-+||...+.    ...-|++.|+...-+.
T Consensus       121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~  171 (274)
T COG2503         121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLES  171 (274)
T ss_pred             cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccccc
Confidence            5789999999999999999999999997665    3445556666555543

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=95.72  E-value=0.0052  Score=41.52  Aligned_cols=26  Identities=23%  Similarity=0.332  Sum_probs=24.0

Q ss_pred             CCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          232 RKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       232 ~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .+||+|.+|     +.+++.++++|++++||
T Consensus         2 ~gKP~p~~~-----~~a~~~~~~~~~~~~~V   27 (75)
T PF13242_consen    2 CGKPSPGML-----EQALKRLGVDPSRCVMV   27 (75)
T ss_dssp             CSTTSHHHH-----HHHHHHHTSGGGGEEEE
T ss_pred             CCCCcHHHH-----HHHHHHcCCCHHHEEEE
Confidence            479999999     88999999999999986

...

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=95.66  E-value=0.027  Score=47.42  Aligned_cols=50  Identities=10%  Similarity=0.254  Sum_probs=41.7

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhcCCCCcccceEEeCC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~---~~~~~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      ++||+.++|+.|+++|++++++||+   +...+...++.+|+....+  .|+++.
T Consensus        18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~--~iit~~   70 (249)
T TIGR01457        18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLE--TVFTAS   70 (249)
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh--hEeeHH
Confidence            4679999999999999999999994   4777788888898876666  677774

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=95.58  E-value=0.028  Score=48.12  Aligned_cols=50  Identities=20%  Similarity=0.254  Sum_probs=40.1

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhcCCCCcccceEEeCC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      ++||+.++|+.|+++|++++++||++   +......|+.+|+....+  .|+++.
T Consensus        19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~--~i~ts~   71 (279)
T TIGR01452        19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAE--QLFSSA   71 (279)
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh--hEecHH
Confidence            67999999999999999999999975   444456778888866655  677764

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=95.50  E-value=0.019  Score=48.64  Aligned_cols=50  Identities=14%  Similarity=0.183  Sum_probs=39.3

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHhcCCCCcccceEEeCC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEK---AVTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~---~~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      +.||+.++|+.|+++|++++++||++..   .+...|+.+|+.--.+  .|+++.
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~--~i~ts~   74 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISED--EVFTPA   74 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHH--HeEcHH
Confidence            6799999999999999999999997544   4677777887753333  566664

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=95.11  E-value=0.1  Score=47.83  Aligned_cols=31  Identities=13%  Similarity=-0.071  Sum_probs=26.4

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hcC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLG  215 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~-~~l  215 (262)
                      .++..+..| +++|+|.+++.+++..++. +|.
T Consensus       101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~  132 (498)
T PLN02499        101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA  132 (498)
T ss_pred             HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC
Confidence            566777788 9999999999999999998 544

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=95.06  E-value=0.23  Score=41.97  Aligned_cols=39  Identities=15%  Similarity=0.185  Sum_probs=31.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL  213 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~  213 (262)
                      -..-+++.++++.|.++|+++..+|..+.......++.+
T Consensus        80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~L  118 (252)
T PF11019_consen   80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLREL  118 (252)
T ss_pred             EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHH
Confidence            345689999999999999999999999866666655544

The function is not known.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=94.57  E-value=0.04  Score=42.84  Aligned_cols=53  Identities=15%  Similarity=0.282  Sum_probs=42.6

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcC-CCCcccceEEeCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVV  230 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l-~~~f~~~~Iv~s~~~  230 (262)
                      ..+.||+.++|+.|.+. +.++|.|.+.+..++.+++.+.- ..+|+  .++..++.
T Consensus        35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~--~~~~r~~~   88 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFS--RRLYRDDC   88 (159)
T ss_dssp             EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEE--EEEEGGGS
T ss_pred             EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhccccc--cccccccc
Confidence            55789999999999776 99999999999999999999965 56787  77776654

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PLN02580 trehalose-phosphatase

Probab=94.45  E-value=0.092  Score=46.90  Aligned_cols=36  Identities=11%  Similarity=0.174  Sum_probs=29.7

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF  212 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~  212 (262)
                      .+-|++.++|+.|.++ .+++|||+.+...+..++.-
T Consensus       141 ~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~  176 (384)
T PLN02580        141 LMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGL  176 (384)
T ss_pred             cCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCC
Confidence            3557888899999888 68999999998888887753

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=94.30  E-value=0.14  Score=42.45  Aligned_cols=63  Identities=10%  Similarity=0.106  Sum_probs=37.4

Q ss_pred             CCCeEEEEeCCCH----HHHHHHHHHhcCCCCcccceEEeC----CCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          191 KGVKVAVCSTSNE----KAVTAIVSFLLGPERAEKIQIFAG----DVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       191 ~G~~l~IvTn~~~----~~~~~~L~~~~l~~~f~~~~Iv~s----~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ..+++.+......    ..+...++..+  ..+.  .++++    +..+..++++...     +.+++++|++++++++|
T Consensus       111 ~~~~i~~~~~~~~~~~~~~~~~~l~~~~--~~~~--~~~~~~~~~ei~~~~~~K~~al-----~~l~~~~g~~~~~~i~~  181 (236)
T TIGR02471       111 GPFKISYLLDPEGEPILPQIRQRLRQQS--QAAK--VILSCGWFLDVLPLRASKGLAL-----RYLSYRWGLPLEQILVA  181 (236)
T ss_pred             CCeeEEEEECcccchHHHHHHHHHHhcc--CCEE--EEEECCceEEEeeCCCChHHHH-----HHHHHHhCCCHHHEEEE
Confidence            3477777665431    12333444432  2223  34454    3345566777777     78899999999888764

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PLN02423 phosphomannomutase

Probab=94.20  E-value=0.037  Score=46.46  Aligned_cols=29  Identities=28%  Similarity=0.475  Sum_probs=18.8

Q ss_pred             CCcEEE-EecCccccccCcchHHHHHHHHHH
Q 024806           76 LPSALL-FDCDGVLVDTEKDGHRISFNDTFK  105 (262)
Q Consensus        76 ~ik~vi-FD~DGTL~d~~~~~~~~a~~~~~~  105 (262)
                      +++.++ ||+||||++.... +.....++++
T Consensus         5 ~~~~i~~~D~DGTLl~~~~~-i~~~~~~ai~   34 (245)
T PLN02423          5 KPGVIALFDVDGTLTAPRKE-ATPEMLEFMK   34 (245)
T ss_pred             ccceEEEEeccCCCcCCCCc-CCHHHHHHHH
Confidence            456555 9999999987764 3333344444

>PRK10444 UMP phosphatase; Provisional

Probab=94.08  E-value=0.12  Score=43.45  Aligned_cols=51  Identities=12%  Similarity=0.209  Sum_probs=37.5

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHhcCCCCcccceEEeCC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~---~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      .+.||+.++|+.|+++|.++.++||++...   ....|+.+|+.--.+  .|+++.
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~--~i~ts~   70 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDS--VFYTSA   70 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHh--hEecHH
Confidence            367999999999999999999999997544   444555566633333  567763

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=93.98  E-value=0.084  Score=39.91  Aligned_cols=43  Identities=14%  Similarity=0.216  Sum_probs=32.3

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCC--CHHHHHHHHHHhcCCCCcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTS--NEKAVTAIVSFLLGPERAE  220 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~--~~~~~~~~L~~~~l~~~f~  220 (262)
                      +...|++.++++.|.+. |.++|+|..  .....+...+.+  .++|+
T Consensus        67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl--~E~FP  111 (180)
T COG4502          67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWL--KEKFP  111 (180)
T ss_pred             cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHH--HHHCC
Confidence            78899999999999998 999999988  334455555543  44454

>PLN03017 trehalose-phosphatase

Probab=93.73  E-value=0.17  Score=44.93  Aligned_cols=33  Identities=12%  Similarity=0.150  Sum_probs=26.3

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIV  210 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L  210 (262)
                      +.+++.+.|+.|. +|++++|+|+.+...+..++
T Consensus       134 i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~  166 (366)
T PLN03017        134 MSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV  166 (366)
T ss_pred             CCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence            3466677888888 67999999999988777764

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=93.69  E-value=0.62  Score=38.99  Aligned_cols=64  Identities=13%  Similarity=0.206  Sum_probs=37.6

Q ss_pred             HCCCeEEEEeCCCH-----HHHHHHHHHhcCCCCcccceEEeC----CCCCCCCCChHHHhhhhhhhhhhhcccCCcccc
Q 024806          190 EKGVKVAVCSTSNE-----KAVTAIVSFLLGPERAEKIQIFAG----DVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNV  260 (262)
Q Consensus       190 ~~G~~l~IvTn~~~-----~~~~~~L~~~~l~~~f~~~~Iv~s----~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v  260 (262)
                      +.-+++.++.....     ......+...++  .+.  .++++    +.....++.....     +.+++.+|+++++++
T Consensus       117 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~--~~~~~~~~ldi~~~~~~K~~al-----~~l~~~~~i~~~~~i  187 (249)
T TIGR01485       117 QRPHKVSFFLDPEAAPEVIKQLTEMLKETGL--DVK--LIYSSGKDLDILPQGSGKGQAL-----QYLLQKLAMEPSQTL  187 (249)
T ss_pred             cCCeeEEEEechhhhhHHHHHHHHHHHhcCC--CEE--EEEECCceEEEEeCCCChHHHH-----HHHHHHcCCCccCEE
Confidence            34578887765432     112223333222  122  34444    3445667777777     888999999999987


Q ss_pred             cC
Q 024806          261 LV  262 (262)
Q Consensus       261 ~I  262 (262)
                      ++
T Consensus       188 ~~  189 (249)
T TIGR01485       188 VC  189 (249)
T ss_pred             EE
Confidence            64

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=93.50  E-value=0.17  Score=49.45  Aligned_cols=36  Identities=14%  Similarity=0.165  Sum_probs=28.0

Q ss_pred             CccHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHh
Q 024806          178 RPGVAKLIDQALE-KGVKVAVCSTSNEKAVTAIVSFL  213 (262)
Q Consensus       178 ~pgv~e~L~~L~~-~G~~l~IvTn~~~~~~~~~L~~~  213 (262)
                      .+++.+.|+.|.+ .|+.++|+|+.+...++..+..+
T Consensus       516 ~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~  552 (726)
T PRK14501        516 DKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL  552 (726)
T ss_pred             CHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC
Confidence            3566688888888 48999999999988787776544

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=93.49  E-value=0.15  Score=46.58  Aligned_cols=52  Identities=15%  Similarity=0.241  Sum_probs=39.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc---------CCCCcccceEEeCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL---------GPERAEKIQIFAGD  228 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~---------l~~~f~~~~Iv~s~  228 (262)
                      +..-|.+..+|+.||+.|-++.++||++-..+...++.+-         +.++||  .|++..
T Consensus       182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFD--vVIv~A  242 (448)
T PF05761_consen  182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFD--VVIVDA  242 (448)
T ss_dssp             EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCEC--EEEES-
T ss_pred             ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhhee--EEEEcC
Confidence            3456899999999999999999999999999999999772         456899  777654

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PLN02151 trehalose-phosphatase

Probab=93.45  E-value=0.17  Score=44.73  Aligned_cols=35  Identities=11%  Similarity=0.140  Sum_probs=27.9

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVS  211 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~  211 (262)
                      .+.|++.+.|+.|.+ +.+++|+|+.+...+..++.
T Consensus       120 ~~~~~~~~aL~~La~-~~~vaIvSGR~~~~l~~~~~  154 (354)
T PLN02151        120 FMSKKMRNTVRKLAK-CFPTAIVSGRCREKVSSFVK  154 (354)
T ss_pred             cCCHHHHHHHHHHhc-CCCEEEEECCCHHHHHHHcC
Confidence            345777888888884 47999999999888877764

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=93.24  E-value=0.48  Score=38.97  Aligned_cols=74  Identities=11%  Similarity=0.117  Sum_probs=54.3

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc-------CCCCcccceEEeCCCCCCCCCChHHHhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL-------GPERAEKIQIFAGDVVPRKKPDPVKICSLTVDI  247 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~-------l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~  247 (262)
                      .+.++++...++..++.|++++|.|.++...+..+..+-+       +..|||  .     ..| .|-.-..|     ..
T Consensus       122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfD--t-----~iG-~K~e~~sy-----~~  188 (254)
T KOG2630|consen  122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFD--T-----TIG-LKVESQSY-----KK  188 (254)
T ss_pred             ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhh--c-----ccc-ceehhHHH-----HH
Confidence            4789999999999999999999999999776666554321       344665  2     123 35556777     66


Q ss_pred             hhhhcccCCccccc
Q 024806          248 VCNVLKTHAHKNVL  261 (262)
Q Consensus       248 a~~~lgv~p~e~v~  261 (262)
                      +.+.+|.+|.+.++
T Consensus       189 I~~~Ig~s~~eiLf  202 (254)
T KOG2630|consen  189 IGHLIGKSPREILF  202 (254)
T ss_pred             HHHHhCCChhheEE
Confidence            77888888877655

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=92.78  E-value=0.056  Score=43.26  Aligned_cols=16  Identities=38%  Similarity=0.480  Sum_probs=14.8

Q ss_pred             CCcEEEEecCcccccc
Q 024806           76 LPSALLFDCDGVLVDT   91 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~   91 (262)
                      .+|+|+||+||||+|.
T Consensus        20 ~ikli~~D~Dgtl~~~   35 (183)
T PRK09484         20 NIRLLICDVDGVFSDG   35 (183)
T ss_pred             CceEEEEcCCeeeecC
Confidence            5999999999999986

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=92.70  E-value=0.3  Score=48.37  Aligned_cols=34  Identities=15%  Similarity=0.157  Sum_probs=25.8

Q ss_pred             ccHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHH
Q 024806          179 PGVAKLIDQA-LEKGVKVAVCSTSNEKAVTAIVSF  212 (262)
Q Consensus       179 pgv~e~L~~L-~~~G~~l~IvTn~~~~~~~~~L~~  212 (262)
                      |++.++|+.| ++.|..++|+|+.+...++.++..
T Consensus       619 ~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~  653 (854)
T PLN02205        619 SKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP  653 (854)
T ss_pred             HHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence            5566777777 567899999999988777777753

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=92.41  E-value=0.075  Score=39.86  Aligned_cols=15  Identities=33%  Similarity=0.534  Sum_probs=13.3

Q ss_pred             cEEEEecCccccccC
Q 024806           78 SALLFDCDGVLVDTE   92 (262)
Q Consensus        78 k~viFD~DGTL~d~~   92 (262)
                      |+++||+||||++..
T Consensus         1 kli~~DlD~Tl~~~~   15 (128)
T TIGR01681         1 KVIVFDLDNTLWTGE   15 (128)
T ss_pred             CEEEEeCCCCCCCCC
Confidence            689999999999874

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=92.35  E-value=0.34  Score=40.07  Aligned_cols=40  Identities=8%  Similarity=-0.008  Sum_probs=35.9

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       178 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .+++.++|+.|+++|+++.++|+.+...+...++.+|+.+
T Consensus        17 ~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~   56 (225)
T TIGR02461        17 PGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP   56 (225)
T ss_pred             chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence            4568899999999999999999999999999999998755

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=92.27  E-value=0.36  Score=40.23  Aligned_cols=51  Identities=22%  Similarity=0.239  Sum_probs=38.0

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHH-hcCCCCcccceEEeCC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSF-LLGPERAEKIQIFAGD  228 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~L~~-~~l~~~f~~~~Iv~s~  228 (262)
                      .++|++.+.|+.|+++|+++.++||+.   .......|.. +|+.--++  .++++.
T Consensus        14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~--~iits~   68 (236)
T TIGR01460        14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPD--QIITSG   68 (236)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHH--HeeeHH
Confidence            468999999999999999999999885   3444445555 56654455  677764

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=92.16  E-value=0.34  Score=39.66  Aligned_cols=37  Identities=19%  Similarity=0.254  Sum_probs=33.9

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       180 gv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      ...++|+.|+++|++++++||.+...+...++.+++.
T Consensus        20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999999875

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=92.12  E-value=0.36  Score=40.98  Aligned_cols=36  Identities=11%  Similarity=0.071  Sum_probs=28.0

Q ss_pred             CCCccHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHH
Q 024806          176 PLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVS  211 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~-G~~l~IvTn~~~~~~~~~L~  211 (262)
                      .+.+++.++|+.|..+ .--++|+|+.+...++..+.
T Consensus        40 ~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~   76 (266)
T COG1877          40 VPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG   76 (266)
T ss_pred             CCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence            4567788888899887 23499999999887777776

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=92.11  E-value=0.95  Score=37.90  Aligned_cols=58  Identities=12%  Similarity=0.190  Sum_probs=40.2

Q ss_pred             HHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEe
Q 024806          167 MVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (262)
Q Consensus       167 ~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~  226 (262)
                      .+.+....+.+.+|+.++++.|.++++|+.|.|.+--..++.+|++.+.  +++...|++
T Consensus        81 ~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~--~~~Nv~VvS  138 (246)
T PF05822_consen   81 EEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGV--FHPNVKVVS  138 (246)
T ss_dssp             HHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEE
T ss_pred             HHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCC--CCCCeEEEe
Confidence            3444444588999999999999999999999999998999999999733  444444554

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=92.08  E-value=0.27  Score=48.06  Aligned_cols=44  Identities=27%  Similarity=0.231  Sum_probs=40.8

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      +++||+.+.|+.|+++|++++++|+.+...++.+.+.+|+..++
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~  611 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA  611 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec
Confidence            78999999999999999999999999999999999999986443

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=91.87  E-value=4.1  Score=36.45  Aligned_cols=47  Identities=11%  Similarity=0.056  Sum_probs=35.8

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---cCCCCcccceEEeC
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAG  227 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~---~l~~~f~~~~Iv~s  227 (262)
                      +....+|..+++.|-++.++||+.-.........+   ++..||+  .+++.
T Consensus       201 ~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd--~v~~~  250 (424)
T KOG2469|consen  201 GTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFD--LVETR  250 (424)
T ss_pred             CccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEE--EEEEe
Confidence            33445899999999999999999877777777654   5677888  55543

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=90.66  E-value=0.63  Score=39.85  Aligned_cols=51  Identities=14%  Similarity=0.164  Sum_probs=36.7

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHhcCCCCcccceEEeC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAI---VSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~---L~~~~l~~~f~~~~Iv~s  227 (262)
                      .+.||+.++++.|++.|-.+.++||++....+..   .+.+|+.. +..+.|+++
T Consensus        38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-v~e~~i~ss   91 (306)
T KOG2882|consen   38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-VKEENIFSS   91 (306)
T ss_pred             CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-cCcccccCh
Confidence            5789999999999999999999999975544444   44555543 333345444

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=90.56  E-value=0.15  Score=36.57  Aligned_cols=15  Identities=47%  Similarity=0.806  Sum_probs=13.0

Q ss_pred             EEEecCccccccCcc
Q 024806           80 LLFDCDGVLVDTEKD   94 (262)
Q Consensus        80 viFD~DGTL~d~~~~   94 (262)
                      ++||+||||++....
T Consensus         1 ~l~D~dGvl~~g~~~   15 (101)
T PF13344_consen    1 FLFDLDGVLYNGNEP   15 (101)
T ss_dssp             EEEESTTTSEETTEE
T ss_pred             CEEeCccEeEeCCCc
Confidence            689999999987764

...

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=90.49  E-value=0.7  Score=40.41  Aligned_cols=49  Identities=14%  Similarity=0.156  Sum_probs=38.5

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---cCCCCcccceEEe
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFA  226 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~---~l~~~f~~~~Iv~  226 (262)
                      .--|....+|+.|+++|-++.++||++-.++..=.+.+   .+.++||  .|+.
T Consensus       240 ~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFD--VVIv  291 (510)
T KOG2470|consen  240 ERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFD--VVIV  291 (510)
T ss_pred             hccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhh--eeEE
Confidence            34577889999999999999999999988888766655   3456788  4444

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=90.25  E-value=0.44  Score=39.40  Aligned_cols=15  Identities=27%  Similarity=0.434  Sum_probs=12.2

Q ss_pred             EEEEecCccccccCc
Q 024806           79 ALLFDCDGVLVDTEK   93 (262)
Q Consensus        79 ~viFD~DGTL~d~~~   93 (262)
                      .|+||+||||++...
T Consensus         1 li~~DlDGTLl~~~~   15 (225)
T TIGR02461         1 VIFTDLDGTLLPPGY   15 (225)
T ss_pred             CEEEeCCCCCcCCCC
Confidence            378999999998544

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=90.07  E-value=0.45  Score=45.82  Aligned_cols=44  Identities=16%  Similarity=0.139  Sum_probs=41.0

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      ++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+.++|
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~  489 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI  489 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE
Confidence            78899999999999999999999999999999999999986655

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=90.01  E-value=0.51  Score=45.69  Aligned_cols=46  Identities=26%  Similarity=0.239  Sum_probs=42.5

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~  220 (262)
                      -++.|++.+.++.|+++|+++.++|+-++..++.+-+.+|+++++-
T Consensus       536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~A  581 (713)
T COG2217         536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRA  581 (713)
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhhec
Confidence            3688999999999999999999999999999999999999977764

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=89.93  E-value=0.76  Score=38.61  Aligned_cols=39  Identities=15%  Similarity=0.218  Sum_probs=34.5

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +...++|+.|+++|++++++|+.+...+...++.+++.+
T Consensus        19 ~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~   57 (256)
T TIGR01486        19 GPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED   57 (256)
T ss_pred             hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            346789999999999999999999999999999997653

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=89.64  E-value=0.59  Score=45.08  Aligned_cols=45  Identities=16%  Similarity=0.238  Sum_probs=41.8

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~  220 (262)
                      ++.||+.+.++.|++.|+++.++|+-+...+..+-+.+|+.++|-
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A  485 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVA  485 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEc
Confidence            789999999999999999999999999999999999999976653

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=89.50  E-value=1.3  Score=38.04  Aligned_cols=37  Identities=16%  Similarity=0.291  Sum_probs=31.9

Q ss_pred             CCCCCccHHHHHHHHHHCC-CeEEEEeCCCHHHHHHHHHHh
Q 024806          174 LLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFL  213 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G-~~l~IvTn~~~~~~~~~L~~~  213 (262)
                      +..+||...++++.+++.| .+++|+||+..   ..+++.+
T Consensus        90 EPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~L  127 (296)
T COG0731          90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEEL  127 (296)
T ss_pred             CcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHHh
Confidence            5789999999999999999 79999999996   4555554

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=89.34  E-value=0.61  Score=45.01  Aligned_cols=44  Identities=16%  Similarity=0.198  Sum_probs=40.8

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      ++.||+.+.++.|++.|+++.++|+-+...+..+-+.+|+.++|
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~  488 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFL  488 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEE
Confidence            56899999999999999999999999999999999999997655

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=88.76  E-value=0.99  Score=38.04  Aligned_cols=40  Identities=20%  Similarity=0.212  Sum_probs=34.6

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       178 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .|...+.|+.|+++|++++++|+.+...+...++.+++..
T Consensus        22 ~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (272)
T PRK10530         22 LPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT   61 (272)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence            4567789999999999999999999888999999887654

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=88.57  E-value=0.31  Score=39.35  Aligned_cols=27  Identities=7%  Similarity=0.080  Sum_probs=20.3

Q ss_pred             CCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          231 PRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       231 ~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +...+++...     +.+++.+|++++++++|
T Consensus       159 p~~~~K~~~~-----~~~~~~~~~~~~~~~~~  185 (204)
T TIGR01484       159 PAGVDKGSAL-----QALLKELNGKRDEILAF  185 (204)
T ss_pred             cCCCChHHHH-----HHHHHHhCCCHHHEEEE
Confidence            3456666666     78889999988888764

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=88.51  E-value=2.5  Score=33.19  Aligned_cols=33  Identities=6%  Similarity=0.051  Sum_probs=23.6

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Q 024806          178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVS  211 (262)
Q Consensus       178 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~  211 (262)
                      ..++...|..+++. .+++-+|..-....+..-.
T Consensus        74 ~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~  106 (194)
T COG5663          74 AQLVKQVLPSLKEE-HRLIYITARKADLTRITYA  106 (194)
T ss_pred             HHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHH
Confidence            35677788888887 8898888886655554433

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=87.75  E-value=0.26  Score=38.21  Aligned_cols=17  Identities=35%  Similarity=0.649  Sum_probs=13.5

Q ss_pred             cEEEEecCccccccCcc
Q 024806           78 SALLFDCDGVLVDTEKD   94 (262)
Q Consensus        78 k~viFD~DGTL~d~~~~   94 (262)
                      |.+|||+||||+.....
T Consensus         1 k~LVlDLD~TLv~~~~~   17 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSK   17 (159)
T ss_dssp             EEEEEE-CTTTEEEESS
T ss_pred             CEEEEeCCCcEEEEeec
Confidence            68999999999987753

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=87.57  E-value=9.2  Score=31.69  Aligned_cols=40  Identities=23%  Similarity=0.188  Sum_probs=35.3

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l  215 (262)
                      ..+.||+.+.++.|.++ +.=+|+|.+.+..+++....+|+
T Consensus        82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~  121 (315)
T COG4030          82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGV  121 (315)
T ss_pred             cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCC
Confidence            67999999999999887 77788899988899988888866

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=86.79  E-value=1.7  Score=43.03  Aligned_cols=37  Identities=16%  Similarity=0.158  Sum_probs=30.2

Q ss_pred             CCCccHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHH
Q 024806          176 PLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSF  212 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~-G~~l~IvTn~~~~~~~~~L~~  212 (262)
                      .+.|++.++|+.|.+. +-.++|+|+.+...++.++..
T Consensus       532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~  569 (797)
T PLN03063        532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE  569 (797)
T ss_pred             CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence            3557888889999765 688999999998888888864

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=86.12  E-value=1.5  Score=36.89  Aligned_cols=15  Identities=33%  Similarity=0.521  Sum_probs=12.8

Q ss_pred             EEEEecCccccccCc
Q 024806           79 ALLFDCDGVLVDTEK   93 (262)
Q Consensus        79 ~viFD~DGTL~d~~~   93 (262)
                      .|+||+||||++...
T Consensus         1 li~~DlDGTll~~~~   15 (256)
T TIGR01486         1 WIFTDLDGTLLDPHG   15 (256)
T ss_pred             CEEEcCCCCCcCCCC
Confidence            378999999999765

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=85.74  E-value=2.5  Score=31.51  Aligned_cols=43  Identities=7%  Similarity=0.079  Sum_probs=35.6

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHhcCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN-EKAVTAIVSFLLGPE  217 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~-~~~~~~~L~~~~l~~  217 (262)
                      +-.|+++...|..|+++|+.++++|++. .+.+...|+.+.+..
T Consensus        43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~   86 (144)
T KOG4549|consen   43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQ   86 (144)
T ss_pred             eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCc
Confidence            6689999999999999999999999994 456677777765543

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=85.35  E-value=3  Score=37.11  Aligned_cols=60  Identities=25%  Similarity=0.267  Sum_probs=37.4

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCC------------HHHHHHHHHHhcCCCCcccceEEeC-CCCCCCCCChHHHh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSN------------EKAVTAIVSFLLGPERAEKIQIFAG-DVVPRKKPDPVKIC  241 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~------------~~~~~~~L~~~~l~~~f~~~~Iv~s-~~~~~~KPdp~~~~  241 (262)
                      ++|.+.+=|+.|.+.||+++|-||..            ..-++.+...+++  -|   .+..+ .....+||..-+++
T Consensus       105 l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~v--Pi---~~~~A~~~~~yRKP~tGMwe  177 (422)
T KOG2134|consen  105 LFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGV--PI---QLLAAIIKGKYRKPSTGMWE  177 (422)
T ss_pred             eccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCC--ce---EEeeeccCCcccCcchhHHH
Confidence            55666677888899999999999974            1223333333322  22   12222 23357899999993

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=84.51  E-value=3.3  Score=31.17  Aligned_cols=43  Identities=16%  Similarity=0.210  Sum_probs=38.1

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER  218 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~  218 (262)
                      -.+++.+.+.|+.|++. +.++|.|+-....+...++..|+..+
T Consensus        29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~   71 (152)
T COG4087          29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE   71 (152)
T ss_pred             cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee
Confidence            46899999999999999 99999999999999999998875443

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=84.33  E-value=2  Score=43.24  Aligned_cols=42  Identities=26%  Similarity=0.354  Sum_probs=39.4

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      ++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+..
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~  578 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFS  578 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999899999999998864

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=84.17  E-value=2  Score=42.27  Aligned_cols=42  Identities=19%  Similarity=0.152  Sum_probs=39.7

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      ++.|++.+.++.|++.|+++.++|+-+...+..+-+.+|+.+
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~  483 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT  483 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence            688999999999999999999999999999999999999864

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=83.40  E-value=3  Score=39.76  Aligned_cols=57  Identities=19%  Similarity=0.258  Sum_probs=48.3

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-cCCCCcccceEEeCCCCCC
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPR  232 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~-~l~~~f~~~~Iv~s~~~~~  232 (262)
                      .+.+.|++.++|+.+.+. +.+.|+|-+.+..+..+++-+ .-..||.. .|++.++.+.
T Consensus       199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~d-RIisrde~~~  256 (635)
T KOG0323|consen  199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFGD-RIISRDESPF  256 (635)
T ss_pred             EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCccccc-eEEEecCCCc
Confidence            367899999999999988 999999999999999999977 55567775 7888887443

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=83.24  E-value=2.6  Score=42.57  Aligned_cols=53  Identities=23%  Similarity=0.296  Sum_probs=45.5

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV  230 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~  230 (262)
                      ++.|++.+.++.|++.|+++.++|+-....+..+-+.+|+.+--.  .++++++.
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~--~vi~G~~~  631 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG--LAMEGKEF  631 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc--eEeeHHHh
Confidence            788999999999999999999999999999999999999875443  46666553

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=83.00  E-value=2.6  Score=33.84  Aligned_cols=37  Identities=22%  Similarity=0.382  Sum_probs=32.7

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL  213 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~  213 (262)
                      +-+.+.+.|+.|+++|++++++|+.+...+..+++.+
T Consensus        18 ~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~   54 (204)
T TIGR01484        18 LSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL   54 (204)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence            3477889999999999999999999999999988864

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR00685 T6PP trehalose-phosphatase

Probab=82.65  E-value=0.73  Score=38.54  Aligned_cols=15  Identities=40%  Similarity=0.709  Sum_probs=12.7

Q ss_pred             cEEEEecCccccccC
Q 024806           78 SALLFDCDGVLVDTE   92 (262)
Q Consensus        78 k~viFD~DGTL~d~~   92 (262)
                      .+++||+||||++..
T Consensus         4 ~~l~lD~DGTL~~~~   18 (244)
T TIGR00685         4 RAFFFDYDGTLSEIV   18 (244)
T ss_pred             EEEEEecCccccCCc
Confidence            589999999999753

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=81.35  E-value=1.5  Score=34.48  Aligned_cols=19  Identities=26%  Similarity=0.310  Sum_probs=15.9

Q ss_pred             CCCcEEEEecCccccccCc
Q 024806           75 VLPSALLFDCDGVLVDTEK   93 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~   93 (262)
                      ..+++|++|+||||.+...
T Consensus        23 ~~v~~vv~D~Dgtl~~~~~   41 (170)
T TIGR01668        23 VGIKGVVLDKDNTLVYPDH   41 (170)
T ss_pred             CCCCEEEEecCCccccCCC
Confidence            4789999999999996544

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=80.41  E-value=1.8  Score=37.78  Aligned_cols=42  Identities=14%  Similarity=0.109  Sum_probs=32.4

Q ss_pred             CCCCccHHHHHHHHHHC----CCeEEEEeCCC---HHH-HHHHHHHhcCC
Q 024806          175 LPLRPGVAKLIDQALEK----GVKVAVCSTSN---EKA-VTAIVSFLLGP  216 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~----G~~l~IvTn~~---~~~-~~~~L~~~~l~  216 (262)
                      -.++||+.++++.|+.+    |+++.++||+.   ... ++.+.+.+|+.
T Consensus        15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~   64 (321)
T TIGR01456        15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD   64 (321)
T ss_pred             ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence            35699999999999998    99999999996   444 33344666653

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	262
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	1e-25
1te2_A	226	Putative phosphatase; structural genomics, phospha	5e-24
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	6e-23
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	5e-22
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	7e-22
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	2e-21
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	4e-21
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	1e-20
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	1e-20
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	6e-19
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	1e-18
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	7e-18
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	8e-18
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	2e-16
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	7e-16
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	1e-15
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	1e-13
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	1e-12
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	3e-12
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	1e-11
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	3e-11
2hsz_A	243	Novel predicted phosphatase; structural genomics,	4e-10
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	4e-10
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	2e-09
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	5e-09
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	4e-08
2zg6_A	220	Putative uncharacterized protein ST2620, probable	3e-07
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	4e-07
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	9e-07
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	3e-06
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	4e-06
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	2e-05
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	5e-05
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	2e-04
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	4e-04
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	5e-04
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	6e-04
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	7e-04
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	7e-04
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	8e-04

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 99.6 bits (249), Expect = 1e-25
 Identities = 29/176 (16%), Positives = 60/176 (34%), Gaps = 26/176 (14%)

Query: 62  MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGEL 121
           MS+R             + +FD DG L D+    +  ++ +        +   +      
Sbjct: 1   MSLRPQT----------SFIFDLDGTLTDSVYQ-NVAAWKEAL--DAENIPLAMWRIHRK 47

Query: 122 LKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGV 181
             IG     M    ++      + +DE+        L ++  + +  L  +  +   PG 
Sbjct: 48  --IGMSGGLMLKSLSR--ETGMSITDEQ-----AERLSEKHAQAYERLQHQ--IIALPGA 96

Query: 182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            +L++   ++ +K  + ++      T  +  L          I   D V   KPDP
Sbjct: 97  VELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI--NIVTRDDVSYGKPDP 150

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score = 95.4 bits (238), Expect = 5e-24
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 24/170 (14%)

Query: 72  SASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM 131
           S      A +FD DG+L+D+E      +  D      LGV         L    G +  M
Sbjct: 4   STPRQILAAIFDMDGLLIDSEPL-WDRAELDVM--ASLGVDISRRNE--LPDTLGLRIDM 58

Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK 191
                    P   PS +E        + +R     + L+E+   PL PGV + +    E+
Sbjct: 59  VVDLWYARQPWNGPSRQE--------VVERVIARAISLVEET-RPLLPGVREAVALCKEQ 109

Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ----IFAGDVVPRKKPDP 237
           G+ V + S S    +  ++         +       + + + +P  KP P
Sbjct: 110 GLLVGLASASPLHMLEKVL------TMFDLRDSFDALASAEKLPYSKPHP 153

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score = 93.1 bits (232), Expect = 6e-23
 Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 23/164 (14%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
            ++FD DGV+ DT    H  ++       E+G++ D      L   G  ++       + 
Sbjct: 7   GVIFDLDGVITDTAH-LHFQAWQQIA--AEIGISIDAQFNESL--KGISRDESLRRILQH 61

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKK-LLPLRPGVAKLIDQALEKGVKVAV 197
           G  E   + +E      A L  RK  L++  + +  +  + PG+  L+     + + V +
Sbjct: 62  GGKEGDFNSQE-----RAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGL 116

Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKPDP 237
            S S           +L     E  + F        +   KPDP
Sbjct: 117 ASVS------LNAPTIL--AALELREFFTFCADASQLKNSKPDP 152

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score = 90.4 bits (225), Expect = 5e-22
 Identities = 29/159 (18%), Positives = 59/159 (37%), Gaps = 15/159 (9%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DGVL ++    H  +++     K  G+    +        G           + 
Sbjct: 26  AVLFDMDGVLFNSMP-YHSEAWHQVM--KTHGLDLSREEAYMH--EGRTGASTINIVFQR 80

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
              ++A  +E E       ++  K+ LF    E       PG  +L+ +   +G+   V 
Sbjct: 81  ELGKEATQEEIES------IYHEKSILFNSYPE---AERMPGAWELLQKVKSEGLTPMVV 131

Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           + S + ++   +         +++ +     V   KP+P
Sbjct: 132 TGSGQLSLLERLEHNFPGMFHKEL-MVTAFDVKYGKPNP 169

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score = 89.7 bits (223), Expect = 7e-22
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 23/164 (14%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A++FD DGV+ DT +  H +++      +++ + +D D+   L   G  +E         
Sbjct: 4   AVIFDLDGVITDTAE-YHFLAWKHIA--EQIDIPFDRDMNERL--KGISREESLESILIF 58

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL-LPLRPGVAKLIDQALEKGVKVAV 197
           G  E   ++ E        L  RK   + +LI K     L PG+ +L+ Q   + +K+ +
Sbjct: 59  GGAETKYTNAE-----KQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGL 113

Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKPDP 237
            S+S           +L   R   I  F        + + KPDP
Sbjct: 114 ASSS------RNAPKIL--RRLAIIDDFHAIVDPTTLAKGKPDP 149

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score = 89.3 bits (222), Expect = 2e-21
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 17/160 (10%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DGVL D+    H  S++     K  G     +        G          ++ 
Sbjct: 25  AVLFDMDGVLFDSMP-NHAESWHKIM--KRFGFGLSREEAYMH--EGRTGASTINIVSRR 79

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
                A  +E +       +++ KTE F    +       PG  +++ +   +G+   V 
Sbjct: 80  ERGHDATEEEIKA------IYQAKTEEFNKCPK---AERMPGALEVLTKIKSEGLTPMVV 130

Query: 199 STS-NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           + S     +  +     G  +A    +     V   KP+P
Sbjct: 131 TGSGQTSLLDRLNHNFPGIFQAN--LMVTAFDVKYGKPNP 168

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score = 86.5 bits (215), Expect = 1e-20
 Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 38/171 (22%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DGV+ DT +  H  ++      +E+G+      + E LK G  +E         
Sbjct: 4   AVLFDLDGVITDTAE-YHFRAWKALA--EEIGINGVDRQFNEQLK-GVSREDSLQKILDL 59

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL-LPLRPGVAKLIDQALEKGVKVAV 197
              +   S EE        L KRK + ++ +I+      + PG+ +L+       +K+A+
Sbjct: 60  ADKK--VSAEE-----FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIAL 112

Query: 198 CSTS-NEKAV----------TAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            S S N   +           AI                    V   KP P
Sbjct: 113 ASASKNGPFLLERMNLTGYFDAIAD---------------PAEVAASKPAP 148

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score = 86.1 bits (214), Expect = 1e-20
 Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 31/166 (18%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A++FD DGVL DTEK  +         +   G++ D         IGG  +++     + 
Sbjct: 7   AIIFDMDGVLFDTEKY-YYDRRASFLGQ--KGISIDHLPPSFF--IGGNTKQVWENILRD 61

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
            + +             ++L +                + P V K++++   +G+++ + 
Sbjct: 62  EYDKWDV----------STLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLA 111

Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIF-------AGDVVPRKKPDP 237
           S+S +  +   +         E+ ++        +G+     KP+P
Sbjct: 112 SSSVKADIFRAL---------EENRLQGFFDIVLSGEEFKESKPNP 148

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250

 Score = 82.4 bits (204), Expect = 6e-19
 Identities = 36/184 (19%), Positives = 62/184 (33%), Gaps = 20/184 (10%)

Query: 57  SSANPMSMRNVRVTCSASVLP--SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD 114
           SS   +   N+     A+     + L+FD DG+L+DTE+  + + F +          + 
Sbjct: 8   SSGVDLGTENLYFQSMAAPPQPVTHLIFDMDGLLLDTERL-YSVVFQEIC--NRYDKKYS 64

Query: 115 VDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL 174
            D+   +  +G                 + P  +EE       L +        +     
Sbjct: 65  WDVKSLV--MGKKALEAAQIIIDVL---QLPMSKEE-------LVEESQTKLKEVFPT-- 110

Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV-VPRK 233
             L PG  KLI    + G+  A+ ++S   +     S            +   D  V   
Sbjct: 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHG 170

Query: 234 KPDP 237
           KPDP
Sbjct: 171 KPDP 174

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score = 81.6 bits (202), Expect = 1e-18
 Identities = 38/185 (20%), Positives = 57/185 (30%), Gaps = 19/185 (10%)

Query: 54  RRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW 113
              SS   +   N+           A+LFD DGVLV++E       +       E G+  
Sbjct: 5   HHHSSGVDLGTENLYFQSMPDAPFDAVLFDLDGVLVESEGI-IAQVWQSVL--AERGLHL 61

Query: 114 DVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKK 173
           D+         G   + + AY            D      F+  L  R            
Sbjct: 62  DLTEIAMYF-TGQRFDGVLAYL-------AQQHDFVPPPDFLDVLETRFNAAM------T 107

Query: 174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVVPR 232
            +    G A+ +      GV  A+ S S    +   +  + G  E A +       V  R
Sbjct: 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLR-VAGLTELAGEHIYDPSWVGGR 166

Query: 233 KKPDP 237
            KP P
Sbjct: 167 GKPHP 171

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score = 80.0 bits (197), Expect = 7e-18
 Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 13/164 (7%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           AL+ D  G  +D        +F + F  K+ G+        E   +G  K          
Sbjct: 16  ALILDWAGTTIDFGSLAPVYAFMELF--KQEGIEVTQAEAREP--MGTEKSEHIRRMLGN 71

Query: 139 G-----WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
                 W         E  + I  L+     +   ++ ++   + PG  ++ D+ + +G+
Sbjct: 72  SRIANAWLSIKGQASNE--EDIKRLYDLFAPIQTRIVAQRSQLI-PGWKEVFDKLIAQGI 128

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           KV    T     + A        +            V R +P P
Sbjct: 129 KVGGN-TGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFP 171

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score = 79.6 bits (196), Expect = 8e-18
 Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 33/186 (17%)

Query: 62  MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD------- 114
           M    +           A++F   G  VD         F + F ++ + +T +       
Sbjct: 1   MDRMKIE----------AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMG 50

Query: 115 ---VDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
              +D    L ++          F +           EE ++ + ++  R          
Sbjct: 51  LLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPI----- 105

Query: 172 KKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP 231
                   GV ++I    E+G+K+   +    + +  +       +  +   +   D VP
Sbjct: 106 -------NGVKEVIASLRERGIKIGSTTGYTREMMDIVAK-EAALQGYKPDFLVTPDDVP 157

Query: 232 RKKPDP 237
             +P P
Sbjct: 158 AGRPYP 163

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 28/187 (14%)

Query: 52  VSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV 111
            ++       M +     T   S+  +A LFD DG ++ ++       + D    K+   
Sbjct: 14  TTKANIQTIAMPLT----TKPLSLKINAALFDVDGTIIISQP-AIAAFWRDFG--KDKPY 66

Query: 112 TWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
                +       G       A F     P+ A  +   +      L     E +     
Sbjct: 67  FDAEHVIHIS--HGWRTYDAIAKFA----PDFADEEYVNK------LEGEIPEKY----- 109

Query: 172 KKLLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV 230
            +     PG  KL +        K AV ++             L  +R E       + V
Sbjct: 110 GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDI-LKIKRPE--YFITANDV 166

Query: 231 PRKKPDP 237
            + KP P
Sbjct: 167 KQGKPHP 173

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 73.5 bits (181), Expect = 7e-16
 Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 38/207 (18%)

Query: 55  RTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD 114
              +  P SM+             A++FD    L+DT  +  R +F       ++G    
Sbjct: 13  EAQTQGPGSMKQPT----------AVIFDWYNTLIDTSINIDRTTFYQVL--DQMGYKN- 59

Query: 115 VDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL 174
           +DL  + +      + +     K          +E    +  SL K          +   
Sbjct: 60  IDL--DSIPNSTIPKYLITLLGK--------RWKEATILYENSLEKS--------QKSDN 101

Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234
             L  G  +L+D   E  + +A+ S  N + + + +         +   I         K
Sbjct: 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD--SIIGSGDTGTIK 159

Query: 235 PDPVKICSLTVDIVCNVLKTHAHKNVL 261
           P P       V      +     K V 
Sbjct: 160 PSP-----EPVLAALTNINIEPSKEVF 181

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score = 73.1 bits (180), Expect = 1e-15
 Identities = 30/162 (18%), Positives = 61/162 (37%), Gaps = 24/162 (14%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNK 137
            ++FDCDGVLVD+E        +      E G    V+  GE    G   + +     ++
Sbjct: 6   LIIFDCDGVLVDSEII-AAQVESRLL--TEAGYPISVEEMGERF-AGMTWKNILLQVESE 61

Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
              P    +   ++ +          +L  + +E+  + +  GV   + +         +
Sbjct: 62  ASIPL--SASLLDKSE----------KLLDMRLERD-VKIIDGVKFALSRL---TTPRCI 105

Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIFAGD--VVPRKKPDP 237
           CS S+   +  +++  +G +      I++       R KP P
Sbjct: 106 CSNSSSHRLDMMLT-KVGLKPYFAPHIYSAKDLGADRVKPKP 146

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 66.8 bits (164), Expect = 1e-13
 Identities = 25/161 (15%), Positives = 54/161 (33%), Gaps = 27/161 (16%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           AL+FD DG L +++         +         +               ++ MT    + 
Sbjct: 6   ALMFDIDGTLTNSQPAYTT-VMREVLATYGKPFS-PAQAQKTF--PMAAEQAMT----EL 57

Query: 139 GWPEKAPSDEEERKQFIASL--HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
           G        +  + Q+   +  H  + EL+            PG+  L +  L   +++ 
Sbjct: 58  GIAA--SEFDHFQAQYEDVMASHYDQIELY------------PGITSLFE-QLPSELRLG 102

Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           + ++     + + +       R       + D  P++KPDP
Sbjct: 103 IVTSQRRNELESGMRSYPFMMRMA--VTISADDTPKRKPDP 141

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 63.7 bits (156), Expect = 1e-12
 Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 30/161 (18%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
             ++D  G L+D  +     +F +T      G+T D D   +   +          F   
Sbjct: 8   DYIWDLGGTLLDNYETSTA-AFVETL--ALYGITQDHDSVYQA--LKVSTPFAIETF--- 59

Query: 139 GWPEKAPSDEEERKQFIA--SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
                AP+ E   +++    +       LF             GV+ L++    +G +  
Sbjct: 60  -----APNLENFLEKYKENEARELEHPILF------------EGVSDLLEDISNQGGRHF 102

Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           + S  N++ +  +    +        ++       ++KP+P
Sbjct: 103 LVSHRNDQVLEILEKTSIAA-YFT--EVVTSSSGFKRKPNP 140

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 63.0 bits (154), Expect = 3e-12
 Identities = 23/163 (14%), Positives = 54/163 (33%), Gaps = 29/163 (17%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK--IGGGKERMTAYFN 136
           A ++D DG L+D+  +       +TF +    + +D +   ++ +       + +     
Sbjct: 6   AFIWDLDGTLLDS-YEAILSGIEETFAQ--FSIPYDKE---KVREFIFKYSVQDLLVRV- 58

Query: 137 KTGWPEKAPSDE--EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
                ++    E   + +    +    +  L             PG  +++  A E G++
Sbjct: 59  ---AEDRNLDVEVLNQVRAQSLAEKNAQVVLM------------PGAREVLAWADESGIQ 103

Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
             + +     A T +    +     E   I        +KP P
Sbjct: 104 QFIYTHKGNNAFTILKDLGVESYFTE---ILTSQSGFVRKPSP 143

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 61.4 bits (150), Expect = 1e-11
 Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 26/163 (15%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
             LFD D  L D+ +      F    +          D+      IG   E         
Sbjct: 8   VYLFDFDYTLADSSRGIVT-CFRSVLERHGYT-GITDDMIKRT--IGKTLEESF----SI 59

Query: 139 GWPEKAPSDEEE-RKQFIA---SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
                     E  R+++           T LF            P     +    ++G++
Sbjct: 60  LTGITDADQLESFRQEYSKEADIYMNANTILF------------PDTLPTLTHLKKQGIR 107

Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           + + ST     + + +   +  +  +   I  G+ V   KPDP
Sbjct: 108 IGIISTKYRFRILSFLRNHMPDDWFD--IIIGGEDVTHHKPDP 148

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 60.6 bits (148), Expect = 3e-11
 Identities = 40/162 (24%), Positives = 59/162 (36%), Gaps = 27/162 (16%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
            +LFD DG L+D+ KD    +   T KE  L   +  D   +   IGGG   +     + 
Sbjct: 5   VILFDLDGTLIDSAKDIAL-ALEKTLKELGLE-EYYPDNVTKY--IGGGVRALL----EK 56

Query: 139 GWPEKAPSDEEERKQFI---ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
              +K    EE  + F           T+ +            P +   ++    KG K+
Sbjct: 57  VLKDKF--REEYVEVFRKHYLENPVVYTKPY------------PEIPYTLEALKSKGFKL 102

Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           AV S   E+    I+  L      +   I  GD    KKP P
Sbjct: 103 AVVSNKLEELSKKILDILNLSGYFD--LIVGGDTFGEKKPSP 142

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score = 57.6 bits (140), Expect = 4e-10
 Identities = 36/171 (21%), Positives = 62/171 (36%), Gaps = 30/171 (17%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM--TAY 134
              + FD DG LV++  D    S N   K+  L      +L      IG G + +   A 
Sbjct: 23  FKLIGFDLDGTLVNSLPDLAL-SINSALKDVNLP-QASENLVMTW--IGNGADVLSQRAV 78

Query: 135 FNKTGWPEKAPSDEEE---RKQFIASLHK---RKTELFMVLIEKKLLPLRPGVAKLIDQA 188
                  EK  +++E    ++QF     +     + L+            P V + ++  
Sbjct: 79  DWACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLY------------PNVKETLEAL 126

Query: 189 LEKGVKVAVCSTSN--EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
             +G  +AV   +N   K V  I++           ++  G  +P  KP P
Sbjct: 127 KAQGYILAVV--TNKPTKHVQPILTAFGIDHLFS--EMLGGQSLPEIKPHP 173

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 57.3 bits (139), Expect = 4e-10
 Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 16/169 (9%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM------- 131
           A +FD DG ++DT  D    + N  F++      + V+        G G           
Sbjct: 6   AAIFDMDGTILDTSADLTS-ALNYAFEQTGHRHDFTVEDIKNF--FGSGVVVAVTRALAY 62

Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP---LRPGVAKLIDQA 188
            A  ++         DE+  +    +   R  E+F               PG+  L+   
Sbjct: 63  EAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNL 122

Query: 189 LEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            +KGVK+AV S    +AV  +V  L  P   +           R+KP P
Sbjct: 123 RQKGVKLAVVSNKPNEAVQVLVEELF-PGSFD--FALGEKSGIRRKPAP 168

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 24/176 (13%), Positives = 47/176 (26%), Gaps = 46/176 (26%)

Query: 62  MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGEL 121
           MS+  ++            +FD DG L     D   I        + L +  + D+   L
Sbjct: 1   MSLSEIK----------HWVFDMDGTLTIAVHDFAAI-------REALSIPAEDDILTHL 43

Query: 122 LKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGV 181
                              P    + +            + +               PG 
Sbjct: 44  ----------------AALPADESAAKHAWLLEHERDLAQGSRPA------------PGA 75

Query: 182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            +L+ +   +G ++ +  T N + +  +    +G           G      KP P
Sbjct: 76  VELVRELAGRGYRLGIL-TRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHP 130

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234

 Score = 54.3 bits (131), Expect = 5e-09
 Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 17/164 (10%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKE--KELGVTWDVDLYGELLKIGGGKERMTAY 134
            + +LFD DG L+  E    R    D   E     G T   D  G++   G     +   
Sbjct: 4   RTLVLFDIDGTLLKVESMNRR-VLADALIEVYGTEGSTGSHDFSGKM--DGAIIYEV--- 57

Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG-V 193
            +  G          E         +    LF     ++ + L  GV +L+D    +  V
Sbjct: 58  LSNVGLE------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDV 111

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            + + + + E +    +  L G +       FA D    +   P
Sbjct: 112 LLGLLTGNFEASGRHKLK-LPGIDHYFPFGAFA-DDALDRNELP 153

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 51.4 bits (124), Expect = 4e-08
 Identities = 23/170 (13%), Positives = 47/170 (27%), Gaps = 41/170 (24%)

Query: 79  ALLFDCDGVLVDTEKDGHRI--SFNDTFKEKELGV-TWDVDLYGELLKIGGG-KERMTAY 134
            +LFD DG L D+ +    I  S   +    +  +   D+    +   +G   K     Y
Sbjct: 6   YVLFDLDGTLTDSAEG---ITKSVKYSL--NKFDIQVEDLSSLNKF--VGPPLKTSFMEY 58

Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKR-------KTELFMVLIEKKLLPLRPGVAKLIDQ 187
           +           DEE     I             + +++             G+  L+  
Sbjct: 59  Y---------NFDEETATVAIDYYRDYFKAKGMFENKVY------------DGIEALLSS 97

Query: 188 ALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
             + G  + V ++        I+         +   I    +  +     
Sbjct: 98  LKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD--AIVGSSLDGKLSTKE 145

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 25/175 (14%), Positives = 46/175 (26%), Gaps = 42/175 (24%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+L D    LV  +              K+ G   D+                       
Sbjct: 5   AVLVDFGNTLVGFKPV-FYEKVYQVL--KDNGYDLDLRKV---------FRAYAKAMGMI 52

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTE-----LFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
            +P++   +  + K F+  L    +E     L    I      L     + ++     G 
Sbjct: 53  NYPDEDGLEHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGY 112

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKI-----------QIFAGDVVPRKKPDP 237
           K+A+   SN               R + +            +     +   KP+P
Sbjct: 113 KLALV--SN------------ASPRVKTLLEKFDLKKYFDALALSYEIKAVKPNP 153

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 22/187 (11%), Positives = 55/187 (29%), Gaps = 49/187 (26%)

Query: 60  NPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRI--SFNDTFKEKELGVTWDVDL 117
           N M                 +LFD DG L D ++    I  S   +      G+  D++ 
Sbjct: 23  NAMKKN-----------YEIVLFDLDGTLTDPKEG---ITKSIQYSLNS--FGIKEDLEN 66

Query: 118 YGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIA-------SLHKRKTELFMVLI 170
             +   IG         +           ++++ K+ +             + +++    
Sbjct: 67  LDQF--IGPPLHDTFKEY--------YKFEDKKAKEAVEKYREYFADKGIFENKIY---- 112

Query: 171 EKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV 230
                     + ++++   + G  + V ++        I+      +R  K  I   ++ 
Sbjct: 113 --------ENMKEILEMLYKNGKILLVATSKPTVFAETILR-YFDIDRYFKY-IAGSNLD 162

Query: 231 PRKKPDP 237
             +    
Sbjct: 163 GTRVNKN 169

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 47.1 bits (113), Expect = 9e-07
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 40/169 (23%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV-TWDVDLYGELLKIGGG-KERMTAYFN 136
           A+ FD DG LVD+    H  +F  TFKE  LGV + D         +G   +        
Sbjct: 6   AIFFDLDGTLVDSSIGIHN-AFTYTFKE--LGVPSPDAKTIRGF--MGPPLESSFATCL- 59

Query: 137 KTGWPEKAPSDEEERKQFIA-------SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL 189
                      +++  + +        +    + +LF            P +  L++  L
Sbjct: 60  ----------SKDQISEAVQIYRSYYKAKGIYEAQLF------------PQIIDLLE-EL 96

Query: 190 EKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPV 238
                + + +T +      +   L      +   I+        K D +
Sbjct: 97  SSSYPLYITTTKDTSTAQDMAKNLEIHHFFD--GIYGSSPEAPHKADVI 143

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 46.0 bits (109), Expect = 3e-06
 Identities = 26/201 (12%), Positives = 55/201 (27%), Gaps = 44/201 (21%)

Query: 48  SRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK 107
           S +++         M  + ++           LL D  GVL++                 
Sbjct: 9   SGVDLGTENLYFQSMKSKGIK----------NLLIDLGGVLIN----------------- 41

Query: 108 ELGVTWDVD-LYGELLKIGGG--KERMTAYFNKTGWPE---KAPSDEEERKQFIASLHKR 161
                 D +       KIG    +E+   +     + +      +  E R      + K 
Sbjct: 42  -----LDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKM 96

Query: 162 KT-ELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE 220
            + +         L+ +      L+   L +   V + S +N+     +          +
Sbjct: 97  VSDKQIDAAWNSFLVDIPTYKLDLL-LKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFK 155

Query: 221 KIQIFAGDV----VPRKKPDP 237
               F        +   KP+P
Sbjct: 156 VEDYFEKTYLSYEMKMAKPEP 176

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240

 Score = 45.6 bits (108), Expect = 4e-06
 Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 35/183 (19%)

Query: 62  MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKE--KELGVTWDVDLYG 119
           M + + +          AL FDC G L+D E         +  +   K  G T+  D   
Sbjct: 1   MQLTDFK----------ALTFDCYGTLIDWET-----GIVNALQPLAKRTGKTFTSDELL 45

Query: 120 ELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEK-----KL 174
           E+       ++             A   +  R  +     +   E      E+     K 
Sbjct: 46  EVFGRNESPQQ--------TETPGALYQDILRAVYDRIAKEWGLEPDAAEREEFGTSVKN 97

Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234
            P  P   + + Q L+K  K+ + S  +        + L          I     V   K
Sbjct: 98  WPAFPDTVEAL-QYLKKHYKLVILSNIDRNEFKLSNAKLGVEFDH----IITAQDVGSYK 152

Query: 235 PDP 237
           P+P
Sbjct: 153 PNP 155

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 25/173 (14%), Positives = 47/173 (27%), Gaps = 31/173 (17%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK---------IGGGKE 129
            + FD    L+D          +   K   L +    +   E+               ++
Sbjct: 6   LVTFDVWNTLLDLNIMLDEF-SHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRK 64

Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL 189
            +T          K   +  +R    A L+  ++ +              G  + +    
Sbjct: 65  VLTGSQEALAGKLKVDVELVKRATARAILNVDESLVL------------EGTKEALQFVK 112

Query: 190 EKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-----IFAGDVVPRKKPDP 237
           E+G+K AV    N   +    S+         +       F  D V   KP  
Sbjct: 113 ERGLKTAVI--GN--VMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRK 161

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 20/178 (11%), Positives = 44/178 (24%), Gaps = 35/178 (19%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVT-------------------WDVDLYG 119
            L +D    L+          +    +   L V                     +  L  
Sbjct: 3   LLTWDVKDTLLRLRHPLGEA-YATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSH 61

Query: 120 ELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRP 179
            L       + +   F+  G  +         + +    H    ++              
Sbjct: 62  GLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVL------------D 109

Query: 180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           G    + +   +G+++AV S  + +    +    L         +   +     KPDP
Sbjct: 110 GAEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDF---VLTSEAAGWPKPDP 164

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 17/125 (13%), Positives = 30/125 (24%), Gaps = 15/125 (12%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
               LFDCD  L+D +     +      +E     +       E L+   G         
Sbjct: 11  DIVFLFDCDNTLLDNDHVLADL-RAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQ 69

Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
           +     + P D          +                  + PG    +     +G    
Sbjct: 70  RYR--LEQPRDTRLLLMSSFLIDYPFAS-----------RVYPGALNALRHLGARG-PTV 115

Query: 197 VCSTS 201
           + S  
Sbjct: 116 ILSDG 120

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 40.2 bits (93), Expect = 4e-04
 Identities = 29/179 (16%), Positives = 51/179 (28%), Gaps = 39/179 (21%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM----- 131
               L   D V V      +  +  + F   EL V+ D  L+     +    + +     
Sbjct: 130 EQLPLQFLDNVKVGKN---NIYAALEEFATTELHVS-DATLFSLKGALWTLAQEVYQEWY 185

Query: 132 --TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL 189
             +  +      EK  +    +  +I               E  L P+   V  L++   
Sbjct: 186 LGSKLYEDV---EKKIARTTFKTGYIYQ-------------EIILRPV-DEVKVLLNDLK 228

Query: 190 EKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVV----------PRKKPDP 237
             G ++ + +             L L P         A DV+          P  KP+P
Sbjct: 229 GAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNP 287

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 23/127 (18%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
               +FD   V+VD       I FN                + +L +I     +  ++  
Sbjct: 7   KMLYIFDLGNVIVD-------IDFNRVLGA-----------WSDLTRIPLASLK-KSFHM 47

Query: 137 KTGWPEK---APSDEEERKQFIASLHKRKT-ELFMVLIEKKLLPLRPGVAKLIDQALEKG 192
              + +      SDE   +     +    + E F    +   + LRP V  ++ +  E+G
Sbjct: 48  GEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQG 107

Query: 193 VKVAVCS 199
            +V V S
Sbjct: 108 HRVVVLS 114

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 41/175 (23%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKE---KELGVTWDVDLYGELLKIGGGKERMTAYF 135
            + FD D  LVDT K    I+  +  +      L V ++   Y EL+++           
Sbjct: 4   VIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLPVDFE-TAYSELIEL----------- 50

Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEK---KLLPLRPGVAKLIDQALEKG 192
            K          +   ++     + +     ++         L   PG  K++ +  E G
Sbjct: 51  IKEYGSNFPYHFDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELG 110

Query: 193 VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ----------IFAGDVVPRKKPDP 237
            ++ + +  N                 EKI           +   D    KKP P
Sbjct: 111 YELGIITDGNPVKQW------------EKILRLELDDFFEHVIISDFEGVKKPHP 153

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196

 Score = 38.8 bits (90), Expect = 7e-04
 Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 7/62 (11%)

Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
            L PG    +    ++G+  A      E   T + + +   +      + A        P
Sbjct: 36  QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPV--NDW-----MIAAPRPTAGWP 88

Query: 236 DP 237
            P
Sbjct: 89  QP 90

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 39.0 bits (91), Expect = 7e-04
 Identities = 26/170 (15%), Positives = 49/170 (28%), Gaps = 34/170 (20%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVD-LYGELLKIGGGK-ERMTAYFN 136
            ++FD  GVL+                        + +        IG    E M   + 
Sbjct: 7   NIVFDLGGVLIH----------------------LNREESIRRFKAIGVADIEEMLDPYL 44

Query: 137 KTGWPEK----APSDEEERKQFIASLHKRKT-ELFMVLIEKKLLPLRPGVAKLIDQALEK 191
           + G          S+EE R +    + K  T +     +   L  +       I  +L  
Sbjct: 45  QKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYDALLGFLEEISAEKFDYI-DSLRP 103

Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV----VPRKKPDP 237
             ++ + S +N   +   +S    P        F        + + KP+ 
Sbjct: 104 DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNE 153

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232

 Score = 38.7 bits (90), Expect = 8e-04
 Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 36/182 (19%)

Query: 64  MRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK--ELGVTWDVDL--YG 119
           M  ++           + FD  G L D          ++ F  +  E+   W      Y 
Sbjct: 1   MDYIK----------GIAFDLYGTLFDV--HSVVGRCDEAFPGRGREISALWRQKQLEYT 48

Query: 120 ELLKIGGG---KERMTAY-FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLL 175
            L  +       ++ T      T        D   R     +  +              L
Sbjct: 49  WLRSLMNRYVNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLR--------------L 94

Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
                V   + +   +G+K+A+ S  + +++ A+VS     +  +   + + D V   KP
Sbjct: 95  APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPVQVYKP 152

Query: 236 DP 237
           D 
Sbjct: 153 DN 154

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	262
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.95
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.94
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.93
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.92
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.92
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.9
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.89
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.89
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.88
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.88
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.88
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.88
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.88
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.88
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.88
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.87
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.87
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.87
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.87
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.87
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.87
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.87
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.87
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.86
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.86
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.85
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.85
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.85
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.84
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.84
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.84
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.83
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.83
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.83
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.83
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.83
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.83
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.83
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.82
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.82
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.82
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.82
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.81
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.81
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.81
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.81
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.81
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.8
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.8
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.79
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.79
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.79
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.79
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.78
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.78
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.78
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.77
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.77
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.76
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.75
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.74
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.73
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.72
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.71
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.7
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.7
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.69
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.68
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.66
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.64
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.64
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.63
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.61
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.61
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.6
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.59
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.57
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.57
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.55
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.52
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.51
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.51
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.49
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.49
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.48
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.45
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.43
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.43
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.41
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.4
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.39
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.38
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.38
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.35
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.35
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.32
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.31
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.31
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.3
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.28
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.27
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.27
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.87
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.23
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.22
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.19
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.19
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.16
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	98.97
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.89
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.88
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	98.83
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.75
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.73
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.72
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.7
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.7
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.7
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	98.67
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.57
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.55
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.51
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.5
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.47
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	98.45
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.39
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.33
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.23
4gxt_A	385	A conserved functionally unknown protein; structur	98.2
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.13
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	98.13
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	98.09
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	98.03
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	97.94
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.93
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.9
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.88
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	97.82
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	97.79
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.75
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.73
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.71
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.54
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.52
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.5
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	97.33
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	97.12
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	97.03
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	96.72
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	96.61
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	95.91
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	94.65
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	93.89
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	93.81
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	93.16
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	92.98
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	92.74
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	92.36
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	91.88
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	91.06
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	90.93
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	90.72
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	89.95
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	89.8
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	86.37
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	85.79
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	83.99
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	82.11
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	81.94
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	80.87

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.95  E-value=5.2e-27  Score=191.29  Aligned_cols=162  Identities=23%  Similarity=0.298  Sum_probs=126.2

Q ss_pred             CcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHHHHH
Q 024806           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQFI  155 (262)
Q Consensus        77 ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  155 (262)
                      ||+||||+||||+|+.+. +..++.++++++|++.+  .+.+...  .+......... ........    .   .+++.
T Consensus         1 IkAViFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~----~---~~~~~   68 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPL-YFEAYRRVAESYGKPYT--EDLHRRI--MGVPEREGLPILMEALEIKD----S---LENFK   68 (216)
T ss_dssp             CCEEEEESBTTTBCCGGG-HHHHHHHHHHHTTCCCC--HHHHHHH--TTSCHHHHHHHHHHHTTCCS----C---HHHHH
T ss_pred             CeEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH--hccchhhhhhhhhhcccchh----h---HHHHH
Confidence            689999999999999996 88899999999988654  4555554  55555444443 33332221    1   12222


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCC
Q 024806          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (262)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KP  235 (262)
                      ..+.+.....+    .. ...++||+.++|+.|+++|++++|+||+++..+...++.+|+.++|+  .++++++++..||
T Consensus        69 ~~~~~~~~~~~----~~-~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd--~~~~~~~~~~~KP  141 (216)
T 3kbb_A           69 KRVHEEKKRVF----SE-LLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFD--VMVFGDQVKNGKP  141 (216)
T ss_dssp             HHHHHHHHHHH----HH-HCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECGGGSSSCTT
T ss_pred             HHHHHHHHHHH----HH-hcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcccc--ccccccccCCCcc
Confidence            22322222222    22 36789999999999999999999999999999999999999999999  8999999999999


Q ss_pred             ChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          236 DPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       236 dp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|++|     +.+++++|++|++|+||
T Consensus       142 ~p~~~-----~~a~~~lg~~p~e~l~V  163 (216)
T 3kbb_A          142 DPEIY-----LLVLERLNVVPEKVVVF  163 (216)
T ss_dssp             STHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             cHHHH-----HHHHHhhCCCccceEEE
Confidence            99999     88999999999999986

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.94  E-value=2e-26  Score=192.10  Aligned_cols=169  Identities=20%  Similarity=0.247  Sum_probs=125.4

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  152 (262)
                      +|.||+||||+||||+|+... +..+|.++++++|++.+.  +.+..+  .|......... +...+....  .....  
T Consensus         2 ~MkiKaViFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~~~--~~~~~~--~g~~~~~~~~~~~~~~~~~~~--~~~~~--   72 (243)
T 4g9b_A            2 VMKLQGVIFDLDGVITDTAHL-HFQAWQQIAAEIGISIDA--QFNESL--KGISRDESLRRILQHGGKEGD--FNSQE--   72 (243)
T ss_dssp             CCCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCCCT--TGGGGG--TTCCHHHHHHHHHHHTTCGGG--CCHHH--
T ss_pred             CccCcEEEEcCCCcccCCHHH-HHHHHHHHHHHcCCCCCH--HHHHHH--cCCCHHHHHHHHHHHhhcccc--hhHHH--
Confidence            467999999999999999996 888999999999987643  333332  45555554443 333332211  11221  


Q ss_pred             HHHHHHHHHHHHHHHHHHHh-cCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP  231 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~  231 (262)
                        ...........+.+.... ....++||+.++++.|+++|++++++||+.  ....+++.+|+.++|+  .|+++++++
T Consensus        73 --~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd--~i~~~~~~~  146 (243)
T 4g9b_A           73 --RAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFT--FCADASQLK  146 (243)
T ss_dssp             --HHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCS--EECCGGGCS
T ss_pred             --HHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccc--ccccccccc
Confidence              122222333334443332 224589999999999999999999999986  4577899999999999  899999999


Q ss_pred             CCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          232 RKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       232 ~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ..||+|++|     ..+++++|++|++||||
T Consensus       147 ~~KP~p~~~-----~~a~~~lg~~p~e~l~V  172 (243)
T 4g9b_A          147 NSKPDPEIF-----LAACAGLGVPPQACIGI  172 (243)
T ss_dssp             SCTTSTHHH-----HHHHHHHTSCGGGEEEE
T ss_pred             CCCCcHHHH-----HHHHHHcCCChHHEEEE
Confidence            999999999     88999999999999986

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.93  E-value=8.9e-26  Score=188.84  Aligned_cols=169  Identities=18%  Similarity=0.281  Sum_probs=124.1

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      .|||+||||+||||+|+.+. +..+|.++++++|++.+.  +....+  .+.........+.+..... ....+..... 
T Consensus        24 ~MIKaViFDlDGTLvDs~~~-~~~a~~~~~~~~g~~~~~--~~~~~~--~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~-   96 (250)
T 4gib_A           24 AMIEAFIFDLDGVITDTAYY-HYMAWRKLAHKVGIDIDT--KFNESL--KGISRMESLDRILEFGNKK-YSFSEEEKVR-   96 (250)
T ss_dssp             CCCCEEEECTBTTTBCCHHH-HHHHHHHHHHTTTCCCCT--TGGGGT--TTCCHHHHHHHHHHHTTCT-TTSCHHHHHH-
T ss_pred             chhheeeecCCCcccCCHHH-HHHHHHHHHHHcCCCCCH--HHHHHH--hCcchHHHHHHhhhhhcCC-CCCCHHHHHH-
Confidence            57999999999999999986 888999999999987653  223222  4444444444333222111 1223333222 


Q ss_pred             HHHHHHHHHHHHHHHHHh-cCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~-~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                         +.+...+.|...... ....++||+.++++.|+++|++++++|+..  .+...|+.+|+.++|+  .|+++++++..
T Consensus        97 ---~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd--~i~~~~~~~~~  169 (250)
T 4gib_A           97 ---MAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFD--FIADAGKCKNN  169 (250)
T ss_dssp             ---HHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCS--EECCGGGCCSC
T ss_pred             ---HHHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccc--eeecccccCCC
Confidence               233333444444332 134689999999999999999999987765  4677899999999999  89999999999


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|++|     ..+++++|++|++|+||
T Consensus       170 KP~p~~~-----~~a~~~lg~~p~e~l~V  193 (250)
T 4gib_A          170 KPHPEIF-----LMSAKGLNVNPQNCIGI  193 (250)
T ss_dssp             TTSSHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             CCcHHHH-----HHHHHHhCCChHHeEEE
Confidence            9999999     88999999999999986

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.92  E-value=1.7e-24  Score=179.58  Aligned_cols=172  Identities=22%  Similarity=0.246  Sum_probs=124.6

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHh------------cC--C
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK------------TG--W  140 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~--~  140 (262)
                      ||+|+|+||+||||+|+... +..++.++++++|+......+.+...  .|.+.......+..            .+  +
T Consensus         2 M~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (240)
T 2hi0_A            2 MKYKAAIFDMDGTILDTSAD-LTSALNYAFEQTGHRHDFTVEDIKNF--FGSGVVVAVTRALAYEAGSSRESLVAFGTKD   78 (240)
T ss_dssp             CSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTSCCCCCHHHHHHH--CSSCHHHHHHHHHHHHTTCCHHHHTTTTSTT
T ss_pred             CcccEEEEecCCCCccCHHH-HHHHHHHHHHHcCCCCCCCHHHHHHh--cCccHHHHHHHHHHhcccccccccccccccc
Confidence            46899999999999999996 88899999999987611234555544  56554444433210            00  0


Q ss_pred             CC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          141 PE-KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       141 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      .. ..........+    +.+.+.+.|..... ....++||+.++|+.|+++|++++|+||++...++..++.+|+. +|
T Consensus        79 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f  152 (240)
T 2hi0_A           79 EQIPEAVTQTEVNR----VLEVFKPYYADHCQ-IKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SF  152 (240)
T ss_dssp             CCCCTTCCHHHHHH----HHHHHHHHHHHTSS-SSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TC
T ss_pred             cccCCCCCHHHHHH----HHHHHHHHHHHhhh-hcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ce
Confidence            00 00112222222    22222333332211 23678999999999999999999999999999999999999988 99


Q ss_pred             ccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          220 EKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       220 ~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +  .++++++++..||+|++|     ..+++++|++|++|++|
T Consensus       153 ~--~~~~~~~~~~~Kp~p~~~-----~~~~~~l~~~~~~~~~v  188 (240)
T 2hi0_A          153 D--FALGEKSGIRRKPAPDMT-----SECVKVLGVPRDKCVYI  188 (240)
T ss_dssp             S--EEEEECTTSCCTTSSHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             e--EEEecCCCCCCCCCHHHH-----HHHHHHcCCCHHHeEEE
Confidence            9  899999999999999999     88999999999999986

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.92  E-value=1.2e-24  Score=177.10  Aligned_cols=160  Identities=16%  Similarity=0.208  Sum_probs=118.2

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (262)
                      ||++|+|+||+||||+|+... +..++.++++++|+... +.+.+...  .|.+....   +... ++      .....+
T Consensus         1 mM~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~---~~~~-~~------~~~~~~   66 (210)
T 2ah5_A            1 MTSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPSP-DAKTIRGF--MGPPLESS---FATC-LS------KDQISE   66 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCCC-CHHHHHHT--SSSCHHHH---HHTT-SC------GGGHHH
T ss_pred             CCCCCEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--cCccHHHH---HHHH-cC------HHHHHH
Confidence            456899999999999999986 77899999999987643 23444433  45443322   2221 11      111122


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      +.+.+.+    .+.+.. .....++||+.++|+.|++ |++++|+||+++..++..++++|+.++|+  .+++++  +..
T Consensus        67 ~~~~~~~----~~~~~~-~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~--~i~~~~--~~~  136 (210)
T 2ah5_A           67 AVQIYRS----YYKAKG-IYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD--GIYGSS--PEA  136 (210)
T ss_dssp             HHHHHHH----HHHHTG-GGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEEC--SSC
T ss_pred             HHHHHHH----HHHHhc-cCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee--eeecCC--CCC
Confidence            2222222    222211 1135789999999999999 99999999999999999999999999999  788887  789


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|++|     ..+++++|++|++|++|
T Consensus       137 Kp~p~~~-----~~~~~~lg~~p~~~~~v  160 (210)
T 2ah5_A          137 PHKADVI-----HQALQTHQLAPEQAIII  160 (210)
T ss_dssp             CSHHHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             CCChHHH-----HHHHHHcCCCcccEEEE
Confidence            9999999     88999999999999986

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.90  E-value=7.5e-23  Score=168.47  Aligned_cols=167  Identities=19%  Similarity=0.165  Sum_probs=129.5

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (262)
                      .+++|+|+||+||||+|+... +..++.++++++|  .....+.+...  .+.........+.....      .......
T Consensus        16 ~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g--~~~~~~~~~~~--~g~~~~~~~~~~~~~~~------~~~~~~~   84 (237)
T 4ex6_A           16 AAADRGVILDLDGTLADTPAA-IATITAEVLAAMG--TAVSRGAILST--VGRPLPASLAGLLGVPV------EDPRVAE   84 (237)
T ss_dssp             -CCCEEEEECSBTTTBCCHHH-HHHHHHHHHHHTT--CCCCHHHHHHH--TTSCHHHHHHHHHTSCT------TSHHHHH
T ss_pred             cccCCEEEEcCCCCCcCCHHH-HHHHHHHHHHHcC--CCCCHHHHHHh--cCccHHHHHHHHhCCCC------CHHHHHH
Confidence            467999999999999999986 8889999999998  33445555554  56666665555432211      2223333


Q ss_pred             HHHHHHHHHHHHHHHHHHh-cCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCC
Q 024806          154 FIASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~  232 (262)
                      +...+    .+.+.+.+.. ....++||+.++|+.|+++|++++|+||+....++..++.+|+.++|+  .++++++++.
T Consensus        85 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~  158 (237)
T 4ex6_A           85 ATEEY----GRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLT--VIAGDDSVER  158 (237)
T ss_dssp             HHHHH----HHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCS--EEECTTTSSS
T ss_pred             HHHHH----HHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhee--eEEeCCCCCC
Confidence            33333    3334443320 236789999999999999999999999999999999999999999999  8999999999


Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .||+|++|     +.+++++|++|+++++|
T Consensus       159 ~kp~~~~~-----~~~~~~lg~~~~~~i~v  183 (237)
T 4ex6_A          159 GKPHPDMA-----LHVARGLGIPPERCVVI  183 (237)
T ss_dssp             CTTSSHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             CCCCHHHH-----HHHHHHcCCCHHHeEEE
Confidence            99999999     88999999999999986

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.89  E-value=2.5e-22  Score=166.95  Aligned_cols=169  Identities=21%  Similarity=0.279  Sum_probs=125.9

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhc----CCCCCCCCcH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKT----GWPEKAPSDE  148 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~  148 (262)
                      ..++|+|+||+||||+|+... +..++.++++++|.... ..+.+..+  .+.+...+... +...    +.    ....
T Consensus        20 ~~~~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~----~~~~   91 (243)
T 2hsz_A           20 MTQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQA-SENLVMTW--IGNGADVLSQRAVDWACKQAEK----ELTE   91 (243)
T ss_dssp             CSSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCCC-CHHHHHHH--CSSCHHHHHHHHHHHHHHHHTC----CCCH
T ss_pred             CccCCEEEEcCCCcCCCCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--hCchHHHHHHHHhhhhhccccc----cCCH
Confidence            467999999999999999986 77899999999987643 33444443  55554443322 2210    11    1122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCC
Q 024806          149 EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD  228 (262)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~  228 (262)
                      ....+..    +.+.+.|..... ....++||+.++|+.|+++|++++|+||+....++.+++.+|+.++|+  .+++++
T Consensus        92 ~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~--~~~~~~  164 (243)
T 2hsz_A           92 DEFKYFK----RQFGFYYGENLC-NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS--EMLGGQ  164 (243)
T ss_dssp             HHHHHHH----HHHHHHHHHHTT-SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTT
T ss_pred             HHHHHHH----HHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE--EEEecc
Confidence            2222222    222333333222 236789999999999999999999999999999999999999999999  899999


Q ss_pred             CCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          229 VVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       229 ~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +++..||+|++|     +.+++++|++|+++++|
T Consensus       165 ~~~~~Kp~~~~~-----~~~~~~~~~~~~~~~~v  193 (243)
T 2hsz_A          165 SLPEIKPHPAPF-----YYLCGKFGLYPKQILFV  193 (243)
T ss_dssp             TSSSCTTSSHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             cCCCCCcCHHHH-----HHHHHHhCcChhhEEEE
Confidence            999999999999     88899999999999886

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.89  E-value=2.7e-23  Score=167.55  Aligned_cols=165  Identities=17%  Similarity=0.174  Sum_probs=121.8

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHH-HhcCCCCCCCCcHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  153 (262)
                      +|+|+|+||+||||+|+... +..++.++++++|.....  +.+...  .+.........+ ...+..    ...   .+
T Consensus         3 ~m~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~~--~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~---~~   70 (214)
T 3e58_A            3 AMVEAIIFDMDGVLFDTEKY-YYDRRASFLGQKGISIDH--LPPSFF--IGGNTKQVWENILRDEYDK----WDV---ST   70 (214)
T ss_dssp             -CCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCCCTT--SCHHHH--TTSCGGGCHHHHHGGGGGG----SCH---HH
T ss_pred             ccccEEEEcCCCCccccHHH-HHHHHHHHHHHcCCCCCH--HHHHHH--cCCCHHHHHHHHHHhhcCC----CCH---HH
Confidence            57999999999999999986 778999999998886543  334433  444444444433 222111    111   11


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      +...+    .+.+.+........++||+.++|+.|+++|++++|+||+....++..++.+|+.++|+  .++++++++..
T Consensus        71 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~  144 (214)
T 3e58_A           71 LQEEY----NTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFD--IVLSGEEFKES  144 (214)
T ss_dssp             HHHHH----HHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGCSSC
T ss_pred             HHHHH----HHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhee--eEeecccccCC
Confidence            22222    2222221111113589999999999999999999999999999999999999999999  89999999999


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|++|     +.+++++|++|+++++|
T Consensus       145 kp~~~~~-----~~~~~~~~~~~~~~~~i  168 (214)
T 3e58_A          145 KPNPEIY-----LTALKQLNVQASRALII  168 (214)
T ss_dssp             TTSSHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             CCChHHH-----HHHHHHcCCChHHeEEE
Confidence            9999999     88999999999999886

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.88  E-value=5.2e-23  Score=168.77  Aligned_cols=162  Identities=25%  Similarity=0.321  Sum_probs=120.5

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |++|+|+||+||||+|+... +..++.++++++|.... ..+.+...  .|.+...+...+...      ...+    ++
T Consensus         1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~~~~------~~~~----~~   66 (222)
T 2nyv_A            1 MSLRVILFDLDGTLIDSAKD-IALALEKTLKELGLEEY-YPDNVTKY--IGGGVRALLEKVLKD------KFRE----EY   66 (222)
T ss_dssp             CEECEEEECTBTTTEECHHH-HHHHHHHHHHHTTCGGG-CCSCGGGG--CSSCHHHHHHHHHGG------GCCT----HH
T ss_pred             CCCCEEEECCCCcCCCCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--hCcCHHHHHHHHhCh------HHHH----HH
Confidence            46899999999999999986 77889999999887621 11223222  455544444433210      0011    11


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      ...    +.+.|.+.. .....++||+.++|+.|+++|++++|+||+....++..++.+|+.++|+  .++++++++..|
T Consensus        67 ~~~----~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~K  139 (222)
T 2nyv_A           67 VEV----FRKHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFD--LIVGGDTFGEKK  139 (222)
T ss_dssp             HHH----HHHHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTSSCTTC
T ss_pred             HHH----HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHhe--EEEecCcCCCCC
Confidence            121    222222211 1246789999999999999999999999999999999999999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     +.+++++|++|+++++|
T Consensus       140 p~~~~~-----~~~~~~~~~~~~~~~~v  162 (222)
T 2nyv_A          140 PSPTPV-----LKTLEILGEEPEKALIV  162 (222)
T ss_dssp             CTTHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             CChHHH-----HHHHHHhCCCchhEEEE
Confidence            999999     88899999999999986

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.88  E-value=5.2e-22  Score=162.52  Aligned_cols=167  Identities=16%  Similarity=0.219  Sum_probs=126.3

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  152 (262)
                      |+++|+|+||+||||+|+... +..++.++++++|+...  .+.+...  .+.....+... +...+..    .......
T Consensus         3 ~~~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~~~~   73 (233)
T 3s6j_A            3 LRPQTSFIFDLDGTLTDSVYQ-NVAAWKEALDAENIPLA--MWRIHRK--IGMSGGLMLKSLSRETGMS----ITDEQAE   73 (233)
T ss_dssp             --CCCEEEECCBTTTEECHHH-HHHHHHHHHHHTTCCCC--HHHHHHH--TTSCHHHHHHHHHHC--------CCHHHHH
T ss_pred             CCcCcEEEEcCCCccccChHH-HHHHHHHHHHHcCCCCC--HHHHHHH--cCCcHHHHHHHHHHhcCCC----CCHHHHH
Confidence            457999999999999999885 78889999999888754  3445444  55555454443 3333221    2233333


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~  232 (262)
                      .+.    ....+.|....  ....++||+.++|+.|+++|++++|+||+....++..++.+|+.++|+  .++++++++.
T Consensus        74 ~~~----~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~  145 (233)
T 3s6j_A           74 RLS----EKHAQAYERLQ--HQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI--NIVTRDDVSY  145 (233)
T ss_dssp             HHH----HHHHHHHHHTG--GGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSS--CEECGGGSSC
T ss_pred             HHH----HHHHHHHHHhh--ccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhh--eeeccccCCC
Confidence            333    22333333321  236789999999999999999999999999999999999999999999  8999999999


Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .||+|++|     +.+++.+|++|+++++|
T Consensus       146 ~kp~~~~~-----~~~~~~l~~~~~~~i~i  170 (233)
T 3s6j_A          146 GKPDPDLF-----LAAAKKIGAPIDECLVI  170 (233)
T ss_dssp             CTTSTHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             CCCChHHH-----HHHHHHhCCCHHHEEEE
Confidence            99999999     88999999999999986

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.88  E-value=1.8e-22  Score=164.81  Aligned_cols=165  Identities=15%  Similarity=0.170  Sum_probs=123.5

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (262)
                      |+|+|+|+||+||||+|+... +..++.++++++|..... .+.+...  .|...........  ++      .......
T Consensus         1 M~m~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~--~~------~~~~~~~   68 (226)
T 3mc1_A            1 MSLYNYVLFDLDGTLTDSAEG-ITKSVKYSLNKFDIQVED-LSSLNKF--VGPPLKTSFMEYY--NF------DEETATV   68 (226)
T ss_dssp             -CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHTTTCCCSC-GGGGGGG--SSSCHHHHHHHHH--CC------CHHHHHH
T ss_pred             CCCCCEEEEeCCCccccCHHH-HHHHHHHHHHHcCCCCCC-HHHHHHH--hCcCHHHHHHHHh--CC------CHHHHHH
Confidence            456999999999999999985 778899999998877532 2333332  4555444433322  22      2222222


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      ....+.    +.+.+.. .....++||+.++|+.|+++|++++|+||+....++..++.+|+.++|+  .++++++++..
T Consensus        69 ~~~~~~----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~  141 (226)
T 3mc1_A           69 AIDYYR----DYFKAKG-MFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD--AIVGSSLDGKL  141 (226)
T ss_dssp             HHHHHH----HHHTTTG-GGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECTTSSS
T ss_pred             HHHHHH----HHHHHhC-cccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee--eeeccCCCCCC
Confidence            222222    2222111 1236799999999999999999999999999999999999999999999  89999999999


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|++|     +.+++++|++|+++++|
T Consensus       142 kp~~~~~-----~~~~~~lgi~~~~~i~i  165 (226)
T 3mc1_A          142 STKEDVI-----RYAMESLNIKSDDAIMI  165 (226)
T ss_dssp             CSHHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             CCCHHHH-----HHHHHHhCcCcccEEEE
Confidence            9999999     88999999999999886

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.88  E-value=3.8e-22  Score=165.25  Aligned_cols=165  Identities=19%  Similarity=0.199  Sum_probs=122.8

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHH-HHHHHh-cCCCCCCCCcHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM-TAYFNK-TGWPEKAPSDEEER  151 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~  151 (262)
                      |+++|+|+||+||||+|+... +..++.++++++|+...  .+.+...  .+...... ...+.. .+..    ......
T Consensus        21 m~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~----~~~~~~   91 (243)
T 3qxg_A           21 RKKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLDLS--REEAYMH--EGRTGASTINIVFQRELGKE----ATQEEI   91 (243)
T ss_dssp             -CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCCC--HHHHHHT--TTSCHHHHHHHHHHHHHSSC----CCHHHH
T ss_pred             cccCCEEEEcCCCCCCCCHHH-HHHHHHHHHHHhCCCCC--HHHHHHH--hCCCHHHHHHHHHHHHhCCC----CCHHHH
Confidence            678999999999999999986 77899999999887754  3333332  34443332 333322 2222    223333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc--ccceEEeCCC
Q 024806          152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA--EKIQIFAGDV  229 (262)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f--~~~~Iv~s~~  229 (262)
                      .+....+    .+.+..   .....++||+.++|+.|+++|++++|+||+....+...++. ++.++|  +  .++++++
T Consensus        92 ~~~~~~~----~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d--~i~~~~~  161 (243)
T 3qxg_A           92 ESIYHEK----SILFNS---YPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKE--LMVTAFD  161 (243)
T ss_dssp             HHHHHHH----HHHHHT---SSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGG--GEECTTT
T ss_pred             HHHHHHH----HHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcc--eEEeHHh
Confidence            3222222    222211   12367899999999999999999999999998999999999 999999  7  8999999


Q ss_pred             CCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          230 VPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       230 ~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++..||+|++|     +.+++++|++|++|++|
T Consensus       162 ~~~~kp~~~~~-----~~~~~~lg~~~~~~i~v  189 (243)
T 3qxg_A          162 VKYGKPNPEPY-----LMALKKGGLKADEAVVI  189 (243)
T ss_dssp             CSSCTTSSHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             CCCCCCChHHH-----HHHHHHcCCCHHHeEEE
Confidence            99999999999     88999999999999986

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.88  E-value=1.6e-21  Score=163.99  Aligned_cols=166  Identities=14%  Similarity=0.156  Sum_probs=112.4

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHH----ccCCCCCCHHHH-HHHH--HhC-------CCHHHHH-----HH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKE----KELGVTWDVDLY-GELL--KIG-------GGKERMT-----AY  134 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~----~g~~~~~~~~~~-~~~~--~~~-------~~~~~~~-----~~  134 (262)
                      .+++|+||||+||||+|+... +..++.+++++    +|+..  +...+ ....  ..+       .....+.     ..
T Consensus        15 ~~~~k~viFDlDGTLvds~~~-~~~a~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (260)
T 2gfh_A           15 LSRVRAVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKE--EAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEA   91 (260)
T ss_dssp             CCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHHHTTCCCT--HHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHH
T ss_pred             cccceEEEEcCCCCCCCCHHH-HHHHHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHH
Confidence            568999999999999999986 77888888774    44432  11111 1100  011       1111110     11


Q ss_pred             HHhcCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc
Q 024806          135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL  214 (262)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~  214 (262)
                      +....-.   .......    ..+    .+.|..... ....++||+.++|+.|++ |++++|+||++...++..++.+|
T Consensus        92 ~~~~~~~---~~~~~~~----~~~----~~~~~~~~~-~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~g  158 (260)
T 2gfh_A           92 IQETKGG---ADNRKLA----EEC----YFLWKSTRL-QHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACA  158 (260)
T ss_dssp             HHHHHCS---SCCHHHH----HHH----HHHHHHHHH-HTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHT
T ss_pred             HHHhcCc---cchHHHH----HHH----HHHHHHHHH-hcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcC
Confidence            1100000   0011111    111    111222111 237899999999999998 59999999999999999999999


Q ss_pred             CCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          215 GPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       215 l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +.++|+  .++++++++..||+|++|     +.+++++|++|++|+||
T Consensus       159 l~~~f~--~i~~~~~~~~~KP~p~~~-----~~~~~~~~~~~~~~~~v  199 (260)
T 2gfh_A          159 CQSYFD--AIVIGGEQKEEKPAPSIF-----YHCCDLLGVQPGDCVMV  199 (260)
T ss_dssp             CGGGCS--EEEEGGGSSSCTTCHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             HHhhhh--eEEecCCCCCCCCCHHHH-----HHHHHHcCCChhhEEEE
Confidence            999999  899999999999999999     88999999999999986

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.88  E-value=9.8e-22  Score=161.34  Aligned_cols=167  Identities=22%  Similarity=0.309  Sum_probs=116.0

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  154 (262)
                      .+|+|+||+||||+|+... +..++.++++++|+..  ..+.+...  .|......... +...+...  .........+
T Consensus         1 ~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   73 (233)
T 3nas_A            1 SLKAVIFDLDGVITDTAEY-HFLAWKHIAEQIDIPF--DRDMNERL--KGISREESLESILIFGGAET--KYTNAEKQEL   73 (233)
T ss_dssp             -CCEEEECSBTTTBCHHHH-HHHHHHHHHHHTTCCC--CHHHHHHT--TTCCHHHHHHHHHHHTTCTT--TSCHHHHHHH
T ss_pred             CCcEEEECCCCCcCCCHHH-HHHHHHHHHHHcCCCC--CHHHHHHH--cCCCHHHHHHHHHHHhCCCC--CCCHHHHHHH
Confidence            3789999999999999986 7889999999998874  34555544  56665555443 33333210  1223333333


Q ss_pred             HHHHHHHHHHHHHHHHHhc-CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKK-LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~-~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      ...    ..+.|.+.+... ...++||+.++|+.|+++|++++|+||+..  ++..++.+|+.++|+  .++++++++..
T Consensus        74 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~--~i~~~~~~~~~  145 (233)
T 3nas_A           74 MHR----KNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH--AIVDPTTLAKG  145 (233)
T ss_dssp             HHH----HHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS--EECCC------
T ss_pred             HHH----HHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC--EEeeHhhCCCC
Confidence            333    333444433321 123899999999999999999999999964  888999999999999  89999999999


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|++|     +.+++++|++|+++++|
T Consensus       146 Kp~~~~~-----~~~~~~lgi~~~~~i~v  169 (233)
T 3nas_A          146 KPDPDIF-----LTAAAMLDVSPADCAAI  169 (233)
T ss_dssp             ---CCHH-----HHHHHHHTSCGGGEEEE
T ss_pred             CCChHHH-----HHHHHHcCCCHHHEEEE
Confidence            9999999     88999999999999986

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.87  E-value=1.9e-21  Score=159.69  Aligned_cols=169  Identities=15%  Similarity=0.165  Sum_probs=120.0

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (262)
                      ||++|+|+||+||||+|+... +..++.++++++|+....  .....+...+   ......+.. +..    .......+
T Consensus         4 mm~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~--~~~~~~~~~~---~~~~~~~~~-~~~----~~~~~~~~   72 (238)
T 3ed5_A            4 MKRYRTLLFDVDDTILDFQAA-EALALRLLFEDQNIPLTN--DMKAQYKTIN---QGLWRAFEE-GKM----TRDEVVNT   72 (238)
T ss_dssp             CCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCCCCH--HHHHHHHHHH---HHHHHHHHT-TSS----CHHHHHHH
T ss_pred             cccCCEEEEcCcCcCcCCchh-HHHHHHHHHHHcCCCcch--HHHHHHHHHH---HHHHHHHHh-ccC----CHHHHHHH
Confidence            467999999999999999986 778999999998887542  2222221111   011111111 100    01111111


Q ss_pred             HHHHHH---------HHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceE
Q 024806          154 FIASLH---------KRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI  224 (262)
Q Consensus       154 ~~~~~~---------~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~I  224 (262)
                      .+..+.         ....+.|.+.... ...++||+.++|+.|+++ ++++|+||+....++..++.+|+.++|+  .+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~  148 (238)
T 3ed5_A           73 RFSALLKEYGYEADGALLEQKYRRFLEE-GHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK--DI  148 (238)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHTT-CCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS--EE
T ss_pred             HHHHHHHHcCCCCcHHHHHHHHHHHHHh-cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh--eE
Confidence            111111         1223334443332 378999999999999999 9999999999999999999999999999  89


Q ss_pred             EeCCCCCCCCCChHHHhhhhhhhhhhhcc-cCCcccccC
Q 024806          225 FAGDVVPRKKPDPVKICSLTVDIVCNVLK-THAHKNVLV  262 (262)
Q Consensus       225 v~s~~~~~~KPdp~~~~~~~~~~a~~~lg-v~p~e~v~I  262 (262)
                      +++++++..||+|++|     +.+++.+| ++|+++++|
T Consensus       149 ~~~~~~~~~kp~~~~~-----~~~~~~~g~~~~~~~i~v  182 (238)
T 3ed5_A          149 FVSEDTGFQKPMKEYF-----NYVFERIPQFSAEHTLII  182 (238)
T ss_dssp             EEGGGTTSCTTCHHHH-----HHHHHTSTTCCGGGEEEE
T ss_pred             EEecccCCCCCChHHH-----HHHHHHcCCCChhHeEEE
Confidence            9999999999999999     88999999 999999986

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.87  E-value=4.3e-21  Score=161.24  Aligned_cols=169  Identities=19%  Similarity=0.189  Sum_probs=123.8

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHH-----------HhcCCCC
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-----------NKTGWPE  142 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  142 (262)
                      |+++|+|+||+||||+|+.......++.++++++|+...  .+.+...  .+.........+           ...+.. 
T Consensus        11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   85 (277)
T 3iru_A           11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVT--QAEAREP--MGTEKSEHIRRMLGNSRIANAWLSIKGQA-   85 (277)
T ss_dssp             CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCC--HHHHHTT--TTSCHHHHHHHHTTSHHHHHHHHHHHSSC-
T ss_pred             hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCC--HHHHHHH--hcCchHHHHHHhccchHHHHHHHHHhccC-
Confidence            457999999999999999875226789999999888743  3444333  333322222211           111211 


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCC-ccc
Q 024806          143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER-AEK  221 (262)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~-f~~  221 (262)
                         .......++...+.    +.+.+.... ...++||+.++|+.|+++|++++|+||.....++..++.+++.++ |+ 
T Consensus        86 ---~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~-  156 (277)
T 3iru_A           86 ---SNEEDIKRLYDLFA----PIQTRIVAQ-RSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA-  156 (277)
T ss_dssp             ---CCHHHHHHHHHHHH----HHHHHHHHH-TCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS-
T ss_pred             ---CCHHHHHHHHHHHH----HHHHHHhhc-cCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc-
Confidence               23333333333333    233333322 378999999999999999999999999999999999999998888 88 


Q ss_pred             ceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCC-cccccC
Q 024806          222 IQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHA-HKNVLV  262 (262)
Q Consensus       222 ~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p-~e~v~I  262 (262)
                       .++++++++..||+|.+|     +.+++++|++| +++++|
T Consensus       157 -~~~~~~~~~~~kp~~~~~-----~~~~~~lgi~~~~~~i~v  192 (277)
T 3iru_A          157 -STVFATDVVRGRPFPDMA-----LKVALELEVGHVNGCIKV  192 (277)
T ss_dssp             -EEECGGGSSSCTTSSHHH-----HHHHHHHTCSCGGGEEEE
T ss_pred             -eEecHHhcCCCCCCHHHH-----HHHHHHcCCCCCccEEEE
Confidence             899999999999999999     88999999999 999886

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.87  E-value=1.1e-21  Score=162.33  Aligned_cols=165  Identities=16%  Similarity=0.083  Sum_probs=115.9

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCC-CCCCHHHHHHHHHhCC------CHHHHHHHHHhc-CCCCCCCCc
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELG-VTWDVDLYGELLKIGG------GKERMTAYFNKT-GWPEKAPSD  147 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~  147 (262)
                      |+|+|+||+||||+|+... +..++.+++++++.. .....+.+...+..+.      ....+...+... +..     .
T Consensus         1 m~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~   74 (241)
T 2hoq_A            1 MVKVIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPY-----N   74 (241)
T ss_dssp             CCCEEEECSBTTTBCHHHH-HHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCC-----C
T ss_pred             CccEEEEcCCCCCCCChhh-HHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCc-----c
Confidence            4799999999999999986 777888888876421 1112222222111110      011122233322 221     1


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeC
Q 024806          148 EEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s  227 (262)
                      .....    .+    .+.|.+.... ...++||+.++|+.|+++|++++|+||+....++..++.+|+.++|+  .++++
T Consensus        75 ~~~~~----~~----~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~  143 (241)
T 2hoq_A           75 PKWIS----AG----VIAYHNTKFA-YLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFE--HVIIS  143 (241)
T ss_dssp             HHHHH----HH----HHHHHHHHHH-HCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCS--EEEEG
T ss_pred             chHHH----HH----HHHHHHHHHh-hCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhcc--EEEEe
Confidence            11111    11    1222222222 26789999999999999999999999999999999999999999999  89999


Q ss_pred             CCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          228 DVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       228 ~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++++..||+|++|     +.+++++|++|++|++|
T Consensus       144 ~~~~~~Kp~~~~~-----~~~~~~~g~~~~~~i~i  173 (241)
T 2hoq_A          144 DFEGVKKPHPKIF-----KKALKAFNVKPEEALMV  173 (241)
T ss_dssp             GGGTCCTTCHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             CCCCCCCCCHHHH-----HHHHHHcCCCcccEEEE
Confidence            9999999999999     88999999999999986

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.87  E-value=8.7e-22  Score=162.76  Aligned_cols=165  Identities=20%  Similarity=0.210  Sum_probs=119.9

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHH-HHHHHh-cCCCCCCCCcHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM-TAYFNK-TGWPEKAPSDEEER  151 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~  151 (262)
                      ++++|+|+||+||||+|+... +..++.++++++|+...  .+.....  .+...... ...+.. .+..    ......
T Consensus        20 ~~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~----~~~~~~   90 (247)
T 3dv9_A           20 SIDLKAVLFDMDGVLFDSMPN-HAESWHKIMKRFGFGLS--REEAYMH--EGRTGASTINIVSRRERGHD----ATEEEI   90 (247)
T ss_dssp             CCCCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCCCC--HHHHHHT--TTSCHHHHHHHHHHHHHSSC----CCHHHH
T ss_pred             CCCCCEEEECCCCccCcCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH--hCCChHHHHHHHHHHhcCCC----CCHHHH
Confidence            467999999999999999986 77889999999887754  2333332  34443333 333322 2222    223332


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc--ccceEEeCCC
Q 024806          152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA--EKIQIFAGDV  229 (262)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f--~~~~Iv~s~~  229 (262)
                      .+....+    .+.+..   .....++||+.++|+.|+++|++++|+||+....+...++. ++.++|  +  .++++++
T Consensus        91 ~~~~~~~----~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~--~~~~~~~  160 (247)
T 3dv9_A           91 KAIYQAK----TEEFNK---CPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQAN--LMVTAFD  160 (247)
T ss_dssp             HHHHHHH----HHHHTT---SCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGG--GEECGGG
T ss_pred             HHHHHHH----HHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCC--eEEeccc
Confidence            2222222    222211   12367899999999999999999999999998889999999 999999  8  8999999


Q ss_pred             CCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          230 VPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       230 ~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++..||+|++|     +.+++++|++|++|++|
T Consensus       161 ~~~~kp~~~~~-----~~~~~~lg~~~~~~i~v  188 (247)
T 3dv9_A          161 VKYGKPNPEPY-----LMALKKGGFKPNEALVI  188 (247)
T ss_dssp             CSSCTTSSHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             CCCCCCCCHHH-----HHHHHHcCCChhheEEE
Confidence            99999999999     88999999999999986

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.87  E-value=8.9e-22  Score=163.70  Aligned_cols=164  Identities=20%  Similarity=0.252  Sum_probs=123.6

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHH-HHHhcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  152 (262)
                      ++++|+|+||+||||+|+... +..++.++++++|+...  .+.+...  .+........ .+...+.+.    ...   
T Consensus        27 ~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~----~~~---   94 (250)
T 3l5k_A           27 PQPVTHLIFDMDGLLLDTERL-YSVVFQEICNRYDKKYS--WDVKSLV--MGKKALEAAQIIIDVLQLPM----SKE---   94 (250)
T ss_dssp             CCCCSEEEEETBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHH--TTCCHHHHHHHHHHHHTCSS----CHH---
T ss_pred             ccCCcEEEEcCCCCcCCCHHH-HHHHHHHHHHHhCCCCC--HHHHHHh--cCCCHHHHHHHHHHHhCCCC----CHH---
Confidence            467999999999999999885 78899999999887643  4455444  5555555444 333444321    121   


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hcCCCCcccceEEeCC--C
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGPERAEKIQIFAGD--V  229 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~-~~l~~~f~~~~Iv~s~--~  229 (262)
                      ++...+    .+.+.+..  ....++||+.++|+.|+++|++++|+||+....+...+.. +++.++|+  .+++++  +
T Consensus        95 ~~~~~~----~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~--~~~~~~~~~  166 (250)
T 3l5k_A           95 ELVEES----QTKLKEVF--PTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFS--HIVLGDDPE  166 (250)
T ss_dssp             HHHHHH----HHHHHHHG--GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSS--CEECTTCTT
T ss_pred             HHHHHH----HHHHHHHh--ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhee--eEEecchhh
Confidence            122222    22233322  2378999999999999999999999999998888877754 58889999  899999  8


Q ss_pred             CCCCCCChHHHhhhhhhhhhhhcccCC--cccccC
Q 024806          230 VPRKKPDPVKICSLTVDIVCNVLKTHA--HKNVLV  262 (262)
Q Consensus       230 ~~~~KPdp~~~~~~~~~~a~~~lgv~p--~e~v~I  262 (262)
                      ++..||+|++|     +.+++++|++|  ++|++|
T Consensus       167 ~~~~Kp~~~~~-----~~~~~~lgi~~~~~~~i~i  196 (250)
T 3l5k_A          167 VQHGKPDPDIF-----LACAKRFSPPPAMEKCLVF  196 (250)
T ss_dssp             CCSCTTSTHHH-----HHHHHTSSSCCCGGGEEEE
T ss_pred             ccCCCCChHHH-----HHHHHHcCCCCCcceEEEE
Confidence            99999999999     88999999988  999886

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.87  E-value=4.1e-22  Score=163.55  Aligned_cols=160  Identities=12%  Similarity=0.102  Sum_probs=117.1

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHH-HHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISF-NDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (262)
                      |+++|+|+||+||||+|+... +..++ .++++++|.....    +...  .+.........+...        .     
T Consensus        22 m~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~~----~~~~--~g~~~~~~~~~~~~~--------~-----   81 (231)
T 3kzx_A           22 MKQPTAVIFDWYNTLIDTSIN-IDRTTFYQVLDQMGYKNID----LDSI--PNSTIPKYLITLLGK--------R-----   81 (231)
T ss_dssp             CCCCSEEEECTBTTTEETTSS-CCHHHHHHHHHHTTCCCCC----CTTS--CTTTHHHHHHHHHGG--------G-----
T ss_pred             cCCCCEEEECCCCCCcCCchh-HHHHHHHHHHHHcCCCHHH----HHHH--hCccHHHHHHHHhCc--------h-----
Confidence            678999999999999999986 66677 9999998876421    1111  222322222222111        0     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~  232 (262)
                        .......+.+.+..........++||+.++|+.|+++|++++|+||+....++..++.+|+.++|+  .++++++++.
T Consensus        82 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~  157 (231)
T 3kzx_A           82 --WKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD--SIIGSGDTGT  157 (231)
T ss_dssp             --HHHHHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEETSSSC
T ss_pred             --HHHHHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee--eEEcccccCC
Confidence              011111111222100001246789999999999999999999999999999999999999999999  8999999999


Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCc-ccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAH-KNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~-e~v~I  262 (262)
                      .||+|++|     +.+++++|++|+ ++++|
T Consensus       158 ~Kp~~~~~-----~~~~~~lgi~~~~~~v~v  183 (231)
T 3kzx_A          158 IKPSPEPV-----LAALTNINIEPSKEVFFI  183 (231)
T ss_dssp             CTTSSHHH-----HHHHHHHTCCCSTTEEEE
T ss_pred             CCCChHHH-----HHHHHHcCCCcccCEEEE
Confidence            99999999     889999999998 88875

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.87  E-value=1.1e-21  Score=163.95  Aligned_cols=164  Identities=21%  Similarity=0.236  Sum_probs=125.5

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHH-HhcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  152 (262)
                      ++++|+|+||+||||+|+... +..++.++++++|..... .+.+...  .+.........+ ...+...    ......
T Consensus        25 ~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~~----~~~~~~   96 (259)
T 4eek_A           25 DAPFDAVLFDLDGVLVESEGI-IAQVWQSVLAERGLHLDL-TEIAMYF--TGQRFDGVLAYLAQQHDFVP----PPDFLD   96 (259)
T ss_dssp             CCCCSEEEEESBTTTEECHHH-HHHHHHHHHHHTTCCCCH-HHHHHHT--TTCCHHHHHHHHHHHHCCCC----CTTHHH
T ss_pred             hcCCCEEEECCCCCcccCHHH-HHHHHHHHHHHhCCCCCH-HHHHHHH--hCCCHHHHHHHHHHHcCCCC----CHHHHH
Confidence            457999999999999999985 788999999998887532 2223332  455555554443 3444332    122222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccce-EEeCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-IFAGDVVP  231 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~-Iv~s~~~~  231 (262)
                          .+.....+.+      ....++||+.++|+.|+++|++++|+||.....++..++.+|+.++|+  . ++++++++
T Consensus        97 ----~~~~~~~~~~------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~i~~~~~~~  164 (259)
T 4eek_A           97 ----VLETRFNAAM------TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAG--EHIYDPSWVG  164 (259)
T ss_dssp             ----HHHHHHHHHH------TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHC--SCEECGGGGT
T ss_pred             ----HHHHHHHHHh------ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhcc--ceEEeHhhcC
Confidence                2222222222      247899999999999999999999999999999999999999999999  7 89999999


Q ss_pred             -CCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          232 -RKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       232 -~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                       ..||+|++|     +.+++.+|++|+++++|
T Consensus       165 ~~~Kp~~~~~-----~~~~~~lgi~~~~~i~i  191 (259)
T 4eek_A          165 GRGKPHPDLY-----TFAAQQLGILPERCVVI  191 (259)
T ss_dssp             TCCTTSSHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             cCCCCChHHH-----HHHHHHcCCCHHHEEEE
Confidence             999999999     88999999999999986

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.87  E-value=3e-22  Score=162.05  Aligned_cols=160  Identities=15%  Similarity=0.254  Sum_probs=121.3

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |++|+|+||+||||+|+... +..++.++++++|...  ..+.+...  .|.....+.+.+   +++      .....+.
T Consensus         2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~---~~~------~~~~~~~   67 (209)
T 2hdo_A            2 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKPF--SPAQAQKT--FPMAAEQAMTEL---GIA------ASEFDHF   67 (209)
T ss_dssp             CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCCC--CHHHHHHH--TTSCHHHHHHHT---TCC------GGGHHHH
T ss_pred             CcccEEEEcCCCCCcCCHHH-HHHHHHHHHHHhCCCC--CHHHHHHH--cCCcHHHHHHHc---CCC------HHHHHHH
Confidence            46899999999999999985 7788999999988743  44555554  555554444433   322      1111111


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      ...+.    +.+.. . .....++||+.++|+.|+++ ++++|+||+....++..++.+|+.++|+  .++++++.+..|
T Consensus        68 ~~~~~----~~~~~-~-~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~K  138 (209)
T 2hdo_A           68 QAQYE----DVMAS-H-YDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA--VTISADDTPKRK  138 (209)
T ss_dssp             HHHHH----HHHTT-C-GGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE--EEECGGGSSCCT
T ss_pred             HHHHH----HHHhh-h-cccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc--EEEecCcCCCCC
Confidence            11111    11111 0 12367899999999999999 9999999999999999999999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     +.+++++|++|+++++|
T Consensus       139 P~~~~~-----~~~~~~~~~~~~~~i~v  161 (209)
T 2hdo_A          139 PDPLPL-----LTALEKVNVAPQNALFI  161 (209)
T ss_dssp             TSSHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             CCcHHH-----HHHHHHcCCCcccEEEE
Confidence            999999     88999999999999886

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.86  E-value=1.1e-21  Score=162.14  Aligned_cols=162  Identities=14%  Similarity=0.156  Sum_probs=123.1

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (262)
                      |+|+|+||+||||+|+... +..++.++++++|...  ..+.+...  .+..........  .+      .......+..
T Consensus        28 mik~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~--~~------~~~~~~~~~~   94 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEG-ITKSIQYSLNSFGIKE--DLENLDQF--IGPPLHDTFKEY--YK------FEDKKAKEAV   94 (240)
T ss_dssp             CCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CGGGGGGG--SSSCHHHHHHHT--SC------CCHHHHHHHH
T ss_pred             hccEEEEecCCcCccCHHH-HHHHHHHHHHHcCCCC--CHHHHHHH--hCccHHHHHHHH--hC------CCHHHHHHHH
Confidence            6899999999999999985 7789999999988873  33444433  444433332221  12      2233333333


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCC
Q 024806          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (262)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KP  235 (262)
                      ..+.    +.+.+.. .....++||+.++|+.|+++|++++|+||+....++..++.+|+.++|+  .++++++.+..||
T Consensus        95 ~~~~----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp  167 (240)
T 3sd7_A           95 EKYR----EYFADKG-IFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK--YIAGSNLDGTRVN  167 (240)
T ss_dssp             HHHH----HHHHHTG-GGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECTTSCCCC
T ss_pred             HHHH----HHHHHhc-ccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE--EEEeccccCCCCC
Confidence            3322    2232211 1236799999999999999999999999999999999999999999999  8999999999999


Q ss_pred             ChHHHhhhhhhhhhhhcccC-CcccccC
Q 024806          236 DPVKICSLTVDIVCNVLKTH-AHKNVLV  262 (262)
Q Consensus       236 dp~~~~~~~~~~a~~~lgv~-p~e~v~I  262 (262)
                      +|.+|     +.+++.+|++ |+++++|
T Consensus       168 ~~~~~-----~~~~~~~g~~~~~~~i~v  190 (240)
T 3sd7_A          168 KNEVI-----QYVLDLCNVKDKDKVIMV  190 (240)
T ss_dssp             HHHHH-----HHHHHHHTCCCGGGEEEE
T ss_pred             CHHHH-----HHHHHHcCCCCCCcEEEE
Confidence            99999     8899999999 9999886

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.86  E-value=3.6e-21  Score=161.78  Aligned_cols=163  Identities=14%  Similarity=0.170  Sum_probs=116.7

Q ss_pred             CcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHH----------------hCCCHHH-----HHHHH
Q 024806           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK----------------IGGGKER-----MTAYF  135 (262)
Q Consensus        77 ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~----------------~~~~~~~-----~~~~~  135 (262)
                      +|+|+||+||||+|+... +..++.+++.++|+...  .+.+...+.                .|.....     +...+
T Consensus         1 ik~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   77 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHP-LGEAYATKARAHGLEVE--PSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTF   77 (263)
T ss_dssp             CCEEEECCBTTTEEESSC-HHHHHHHHHHHTTCCCC--HHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHH
T ss_pred             CcEEEEcCCCceeCCCCC-HHHHHHHHHHHhCCCCC--HHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHH
Confidence            589999999999999886 77899999999988753  333322210                1111111     11122


Q ss_pred             HhcCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcC
Q 024806          136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (262)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l  215 (262)
                      ...+..     ..       +.+.....+.+........+.++||+.++|+.|+++|++++|+||... .+...++.+|+
T Consensus        78 ~~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl  144 (263)
T 3k1z_A           78 HLAGVQ-----DA-------QAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGL  144 (263)
T ss_dssp             HHTTCC-----CH-------HHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTC
T ss_pred             HHcCCC-----CH-------HHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCc
Confidence            222210     11       111122223333322222357899999999999999999999999886 47899999999


Q ss_pred             CCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          216 PERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       216 ~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .++|+  .++++++++..||+|.+|     ..+++++|++|++|++|
T Consensus       145 ~~~f~--~~~~~~~~~~~Kp~~~~~-----~~~~~~~g~~~~~~~~v  184 (263)
T 3k1z_A          145 REHFD--FVLTSEAAGWPKPDPRIF-----QEALRLAHMEPVVAAHV  184 (263)
T ss_dssp             GGGCS--CEEEHHHHSSCTTSHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             HHhhh--EEEeecccCCCCCCHHHH-----HHHHHHcCCCHHHEEEE
Confidence            99999  899999999999999999     88999999999999986

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.85  E-value=9.2e-21  Score=155.59  Aligned_cols=165  Identities=16%  Similarity=0.222  Sum_probs=118.3

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCC-CHHHHHHHHHh-----------C-CCHHH-----HHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW-DVDLYGELLKI-----------G-GGKER-----MTAYFN  136 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~-~~~~~~~~~~~-----------~-~~~~~-----~~~~~~  136 (262)
                      |++|+|+||+||||+|+... +..++.++++++|+.... ..+.+...+..           + .....     +...+.
T Consensus         3 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (240)
T 3qnm_A            3 LKYKNLFFDLDDTIWAFSRN-ARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQ   81 (240)
T ss_dssp             CCCSEEEECCBTTTBCHHHH-HHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCCcCchhh-HHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence            47999999999999999986 778899999998876410 12222221100           0 00001     112222


Q ss_pred             hcCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      ..+++     ...        ......+.|..... ....++||+.++|+.|+ +|++++|+||+....++..++.+|+.
T Consensus        82 ~~~~~-----~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~  146 (240)
T 3qnm_A           82 AVGVE-----DEA--------LAERFSEDFFAIIP-TKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVD  146 (240)
T ss_dssp             HTTCC-----CHH--------HHHHHHHHHHHHGG-GCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred             HcCCC-----cHH--------HHHHHHHHHHHHhh-hcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChH
Confidence            22221     111        11122222333222 23788999999999999 99999999999999999999999999


Q ss_pred             CCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          217 ERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       217 ~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++|+  .++++++++..||+|.+|     +.+++++|++|+++++|
T Consensus       147 ~~f~--~~~~~~~~~~~kp~~~~~-----~~~~~~lgi~~~~~~~i  185 (240)
T 3qnm_A          147 RYFK--KIILSEDLGVLKPRPEIF-----HFALSATQSELRESLMI  185 (240)
T ss_dssp             GGCS--EEEEGGGTTCCTTSHHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             hhce--eEEEeccCCCCCCCHHHH-----HHHHHHcCCCcccEEEE
Confidence            9999  899999999999999999     88999999999999986

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.85  E-value=8.1e-22  Score=166.09  Aligned_cols=80  Identities=13%  Similarity=0.111  Sum_probs=73.7

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---cCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhh
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCN  250 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~---~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~  250 (262)
                      ...++||+.++|+.|+++|++++|+||++...++.+++.+   |+.++|+  .++++ +++ .||+|++|     +.+++
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd--~i~~~-~~~-~KP~p~~~-----~~~~~  198 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVD--GHFDT-KIG-HKVESESY-----RKIAD  198 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCS--EEECG-GGC-CTTCHHHH-----HHHHH
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhcc--EEEec-CCC-CCCCHHHH-----HHHHH
Confidence            3689999999999999999999999999998899999854   5999999  88888 889 99999999     88999


Q ss_pred             hcccCCcccccC
Q 024806          251 VLKTHAHKNVLV  262 (262)
Q Consensus       251 ~lgv~p~e~v~I  262 (262)
                      ++|++|++|+||
T Consensus       199 ~lg~~p~~~l~V  210 (261)
T 1yns_A          199 SIGCSTNNILFL  210 (261)
T ss_dssp             HHTSCGGGEEEE
T ss_pred             HhCcCcccEEEE
Confidence            999999999986

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.85  E-value=2.1e-21  Score=158.86  Aligned_cols=157  Identities=14%  Similarity=0.124  Sum_probs=99.6

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHH-hCCCH---------HHHHHHHHhcCCCCCC
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK-IGGGK---------ERMTAYFNKTGWPEKA  144 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~~  144 (262)
                      |++|+|+||+||||+|+... +..++.+++.++|+.... .+.+..+.. .|...         ..+...+...+.+.  
T Consensus         1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~--   76 (220)
T 2zg6_A            1 MKYKAVLVDFGNTLVGFKPV-FYEKVYQVLKDNGYDLDL-RKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYP--   76 (220)
T ss_dssp             CCCCEEEECSBTTTEEEEET-THHHHHHHHHHTTCCCCH-HHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCC--
T ss_pred             CCceEEEEcCCCceeccccc-HHHHHHHHHHHhCCCCCH-HHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCC--
Confidence            35899999999999999986 777899999998876532 122222211 11110         00222233323221  


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceE
Q 024806          145 PSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI  224 (262)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~I  224 (262)
                        .++.    .+.+.+    .+   .......++||+.++|+.|+++|++++|+||++. .++..++.+|+.++|+  .+
T Consensus        77 --~~~~----~~~~~~----~~---~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~--~~  140 (220)
T 2zg6_A           77 --SERL----VKELKE----AD---IRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFD--AL  140 (220)
T ss_dssp             --CHHH----HHHHHH----TT---TTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCS--EE
T ss_pred             --cHHH----HHHHHH----Hh---hcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHee--EE
Confidence              1111    111111    11   0112357899999999999999999999999976 5889999999999999  89


Q ss_pred             EeCCCCCCCCCChHHHhhhhhhhhhhhcccCC
Q 024806          225 FAGDVVPRKKPDPVKICSLTVDIVCNVLKTHA  256 (262)
Q Consensus       225 v~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p  256 (262)
                      +++++++..||+|++|     +.+++++|++|
T Consensus       141 ~~~~~~~~~Kp~~~~~-----~~~~~~~~~~~  167 (220)
T 2zg6_A          141 ALSYEIKAVKPNPKIF-----GFALAKVGYPA  167 (220)
T ss_dssp             C-----------CCHH-----HHHHHHHCSSE
T ss_pred             EeccccCCCCCCHHHH-----HHHHHHcCCCe
Confidence            9999999999999999     88899999987

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.84  E-value=1.2e-20  Score=154.55  Aligned_cols=169  Identities=15%  Similarity=0.111  Sum_probs=118.6

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHH-ccCCCCCCHHHHHHHHHhCCCHHH-HHHHHHhcCCCCCCCCcHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKE-KELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERK  152 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  152 (262)
                      |++|+|+||+||||+|+... +..++.+++.+ +|....   +.+..  ..|..... +...+...+..      .....
T Consensus         2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~---~~~~~--~~g~~~~~~~~~~~~~~~~~------~~~~~   69 (234)
T 2hcf_A            2 MSRTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGS---TGSHD--FSGKMDGAIIYEVLSNVGLE------RAEIA   69 (234)
T ss_dssp             -CCEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCC---C---C--CTTCCHHHHHHHHHHTTTCC------HHHHH
T ss_pred             CcceEEEEcCCCCcccCccc-hHHHHHHHHHHHhCCCCc---cchhh--hcCCChHHHHHHHHHHcCCC------cccch
Confidence            46899999999999999986 77889998888 677643   12221  24555444 34445444321      11001


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP  231 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~  231 (262)
                      +....+...+.+.+.+........++||+.++|+.|+++ |++++|+||+....++..++.+|+.++|+  .++++++..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~  147 (234)
T 2hcf_A           70 DKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP--FGAFADDAL  147 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS--CEECTTTCS
T ss_pred             hHHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcC--cceecCCCc
Confidence            112222222223333322112356899999999999999 99999999999999999999999999999  778877764


Q ss_pred             -CCCCChHHHhhhhhhhhhhhcc--cCCcccccC
Q 024806          232 -RKKPDPVKICSLTVDIVCNVLK--THAHKNVLV  262 (262)
Q Consensus       232 -~~KPdp~~~~~~~~~~a~~~lg--v~p~e~v~I  262 (262)
                       ..||+|.+|     +.+++++|  ++|++|++|
T Consensus       148 ~~~k~~~~~~-----~~~~~~lg~~~~~~~~i~i  176 (234)
T 2hcf_A          148 DRNELPHIAL-----ERARRMTGANYSPSQIVII  176 (234)
T ss_dssp             SGGGHHHHHH-----HHHHHHHCCCCCGGGEEEE
T ss_pred             CccchHHHHH-----HHHHHHhCCCCCcccEEEE
Confidence             467899999     88899999  899999986

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.84  E-value=2.6e-20  Score=149.01  Aligned_cols=160  Identities=16%  Similarity=0.211  Sum_probs=117.3

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhC-CCHHHHHHHHH-hcCCCCCCCCcHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIG-GGKERMTAYFN-KTGWPEKAPSDEEERK  152 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (262)
                      ||+|+|+||+||||+|+... +..++.++++++|+..  ..+.+...  .+ .+...+...+. ..++      ..    
T Consensus         2 M~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~~------~~----   66 (207)
T 2go7_A            2 MQKTAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIPY--DKEKVREF--IFKYSVQDLLVRVAEDRNL------DV----   66 (207)
T ss_dssp             --CCEEEECTBTTTEECHHH-HHHHHHHHHHHHTCCC--CHHHHHHH--HHHSCHHHHHHHHHHHHTC------CH----
T ss_pred             CcccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCCC--CHHHHHHH--HccccHHHHHHHhhchhhc------cH----
Confidence            46899999999999999885 7778889999988743  34555444  33 33444433332 1111      01    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~  232 (262)
                      +...    ...+.+.+.+. ....++||+.++|+.|+++|++++++||.....+. .++.+++.++|+  .++++++.+.
T Consensus        67 ~~~~----~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~--~~~~~~~~~~  138 (207)
T 2go7_A           67 EVLN----QVRAQSLAEKN-AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT--EILTSQSGFV  138 (207)
T ss_dssp             HHHH----HHHHHHHTTCG-GGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE--EEECGGGCCC
T ss_pred             HHHH----HHHHHHHHhcc-ccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee--eEEecCcCCC
Confidence            1111    11222222111 23678999999999999999999999999988888 999999999999  8899999999


Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .||+|++|     +.+++.+|++|+++++|
T Consensus       139 ~Kp~~~~~-----~~~~~~~~i~~~~~~~i  163 (207)
T 2go7_A          139 RKPSPEAA-----TYLLDKYQLNSDNTYYI  163 (207)
T ss_dssp             CTTSSHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             CCCCcHHH-----HHHHHHhCCCcccEEEE
Confidence            99999999     88999999999999875

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.84  E-value=1.8e-20  Score=153.37  Aligned_cols=164  Identities=14%  Similarity=0.042  Sum_probs=114.3

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCH-HHHHHH--------HHhCCCHH---HHHH-HHHhcCCC
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDV-DLYGEL--------LKIGGGKE---RMTA-YFNKTGWP  141 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~--------~~~~~~~~---~~~~-~~~~~~~~  141 (262)
                      .|+|+|+||+||||+|+... +..++.++++++|....... +.+...        ...|....   .+.. .....+..
T Consensus         2 ~m~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   80 (235)
T 2om6_A            2 REVKLVTFDVWNTLLDLNIM-LDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVD   80 (235)
T ss_dssp             CCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCC
T ss_pred             CCceEEEEeCCCCCCCcchh-HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCC
Confidence            36899999999999999885 77788899998877532110 111110        00022222   1221 11222211


Q ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhcCCCC
Q 024806          142 EKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPER  218 (262)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~L~~~~l~~~  218 (262)
                            ....    ..+    .+.+......  ..++||+.++|+.|+++|++++++||..   ...++..++.+++.++
T Consensus        81 ------~~~~----~~~----~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~  144 (235)
T 2om6_A           81 ------VELV----KRA----TARAILNVDE--SLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF  144 (235)
T ss_dssp             ------HHHH----HHH----HHHHHHHCCG--GGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG
T ss_pred             ------HHHH----HHH----HHHHHHhccc--cCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH
Confidence                  1111    111    1112222111  2359999999999999999999999999   9999999999999999


Q ss_pred             cccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          219 AEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       219 f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+  .++++++++..||+|++|     +.+++++|++|+++++|
T Consensus       145 f~--~~~~~~~~~~~kp~~~~~-----~~~~~~lgi~~~~~~~i  181 (235)
T 2om6_A          145 ID--KTFFADEVLSYKPRKEMF-----EKVLNSFEVKPEESLHI  181 (235)
T ss_dssp             CS--EEEEHHHHTCCTTCHHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             hh--hheeccccCCCCCCHHHH-----HHHHHHcCCCccceEEE
Confidence            99  899999999999999999     88999999999999875

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.83  E-value=2e-20  Score=151.90  Aligned_cols=166  Identities=20%  Similarity=0.251  Sum_probs=119.4

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHH-HHHhcCCCCCCCCcHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |+|+|+||+||||+|+... +..++.++++++|... .....+...  .|........ .+...+..    .......++
T Consensus         1 m~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~-~~~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~~~~~~   72 (221)
T 2wf7_A            1 MFKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING-VDRQFNEQL--KGVSREDSLQKILDLADKK----VSAEEFKEL   72 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC-CSHHHHTTT--TTCCHHHHHHHHHHHTTCC----CCHHHHHHH
T ss_pred             CCcEEEECCCCcccCChHH-HHHHHHHHHHHcCCCC-CCHHHHHHh--CCCCHHHHHHHHHHHhCCC----CChHHHHHH
Confidence            3899999999999999885 7778999999987761 223333322  4444444333 33333321    223332333


Q ss_pred             HHHHHHHHHHHHHHHHHh-cCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~-~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      ...    ..+.|...... ....++||+.++|+.|+++|++++++||.  ..++..++.+++.++|+  .++++++++..
T Consensus        73 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~--~~~~~~~~~~~  144 (221)
T 2wf7_A           73 AKR----KNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFD--AIADPAEVAAS  144 (221)
T ss_dssp             HHH----HHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCS--EECCTTTSSSC
T ss_pred             HHH----HHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcc--eEeccccCCCC
Confidence            222    22233333221 12468899999999999999999999998  45678899999999999  88999999999


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|++|     +.+++++|++|+++++|
T Consensus       145 Kp~~~~~-----~~~~~~lgi~~~~~i~i  168 (221)
T 2wf7_A          145 KPAPDIF-----IAAAHAVGVAPSESIGL  168 (221)
T ss_dssp             TTSSHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             CCChHHH-----HHHHHHcCCChhHeEEE
Confidence            9999999     88999999999999875

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.83  E-value=8.2e-21  Score=155.73  Aligned_cols=158  Identities=18%  Similarity=0.138  Sum_probs=113.0

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHh----------CCCH-----HHHHHHHHhc
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKI----------GGGK-----ERMTAYFNKT  138 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~----------~~~~-----~~~~~~~~~~  138 (262)
                      ++++|+|+||+||||+|+... +..++.++++++|+...  .+.+...+..          +...     ..+.....+.
T Consensus         3 ~~~~k~i~fD~DGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (240)
T 3smv_A            3 LTDFKALTFDCYGTLIDWETG-IVNALQPLAKRTGKTFT--SDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEW   79 (240)
T ss_dssp             GGGCSEEEECCBTTTBCHHHH-HHHHTHHHHHHHTCCCC--HHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHT
T ss_pred             CccceEEEEeCCCcCcCCchh-HHHHHHHHHHHhCCCCC--HHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHh
Confidence            457999999999999999985 77889999999888754  3333332110          0111     1112222233


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCC
Q 024806          139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER  218 (262)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~  218 (262)
                      +.+    .....            .+.|....  ....++||+.++|+.|++ |++++|+||++...+...++.  +..+
T Consensus        80 ~~~----~~~~~------------~~~~~~~~--~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~  138 (240)
T 3smv_A           80 GLE----PDAAE------------REEFGTSV--KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVE  138 (240)
T ss_dssp             TCC----CCHHH------------HHHHHTGG--GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSC
T ss_pred             CCC----CCHHH------------HHHHHHHH--hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCc
Confidence            322    11111            11121111  236899999999999999 799999999999888888887  5679


Q ss_pred             cccceEEeCCCCCCCCCChHHHhhhhhhhh---hhhcccCCcccccC
Q 024806          219 AEKIQIFAGDVVPRKKPDPVKICSLTVDIV---CNVLKTHAHKNVLV  262 (262)
Q Consensus       219 f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a---~~~lgv~p~e~v~I  262 (262)
                      |+  .++++++++..||+|++|     +.+   ++++|++|++|++|
T Consensus       139 fd--~i~~~~~~~~~KP~~~~~-----~~~l~~~~~lgi~~~~~~~v  178 (240)
T 3smv_A          139 FD--HIITAQDVGSYKPNPNNF-----TYMIDALAKAGIEKKDILHT  178 (240)
T ss_dssp             CS--EEEEHHHHTSCTTSHHHH-----HHHHHHHHHTTCCGGGEEEE
T ss_pred             cC--EEEEccccCCCCCCHHHH-----HHHHHHHHhcCCCchhEEEE
Confidence            99  899999999999999999     555   89999999999986

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.83  E-value=9.1e-20  Score=148.03  Aligned_cols=165  Identities=16%  Similarity=0.248  Sum_probs=122.5

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |++|+|+||+||||+|+... +..++.++++++|.... ..+.+...  .|.........+...       ........+
T Consensus         4 M~~k~v~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~~~~-------~~~~~~~~~   72 (225)
T 3d6j_A            4 MKYTVYLFDFDYTLADSSRG-IVTCFRSVLERHGYTGI-TDDMIKRT--IGKTLEESFSILTGI-------TDADQLESF   72 (225)
T ss_dssp             -CCSEEEECCBTTTEECHHH-HHHHHHHHHHHTTCCCC-CHHHHHTT--TTSCHHHHHHHHHCC-------CCHHHHHHH
T ss_pred             CCCCEEEEeCCCCCCCCHHH-HHHHHHHHHHHhCCCCC-CHHHHHHH--hCCcHHHHHHHHcCC-------CCHHHHHHH
Confidence            45899999999999999885 77789999999887632 23444332  455555554443321       122222222


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      .    ....+.+.+.+.. ...++||+.++|+.|+++|++++++||.....++..++.+++..+|+  .++++++.+..|
T Consensus        73 ~----~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k  145 (225)
T 3d6j_A           73 R----QEYSKEADIYMNA-NTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFD--IIIGGEDVTHHK  145 (225)
T ss_dssp             H----HHHHHHHHHHTGG-GCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCS--EEECGGGCSSCT
T ss_pred             H----HHHHHHHHHhccc-cCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhee--eeeehhhcCCCC
Confidence            2    2222333333222 36789999999999999999999999999999999999999999999  889999889999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|.+|     ..+++.+|++|+++++|
T Consensus       146 ~~~~~~-----~~~~~~~~~~~~~~i~i  168 (225)
T 3d6j_A          146 PDPEGL-----LLAIDRLKACPEEVLYI  168 (225)
T ss_dssp             TSTHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             CChHHH-----HHHHHHhCCChHHeEEE
Confidence            999999     88899999999999875

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.83  E-value=4e-20  Score=151.53  Aligned_cols=81  Identities=17%  Similarity=0.176  Sum_probs=77.6

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+++|++++|+||++...++..++.+|+.++|+  .++++++++..||+|.+|     +.+++.+|+
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~-----~~~~~~~~~  170 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD--HVLSVDAVRLYKTAPAAY-----ALAPRAFGV  170 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS--EEEEGGGTTCCTTSHHHH-----THHHHHHTS
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC--EEEEecccCCCCcCHHHH-----HHHHHHhCC
Confidence            6789999999999999999999999999999999999999999999  899999999999999999     889999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|+++++|
T Consensus       171 ~~~~~~~v  178 (233)
T 3umb_A          171 PAAQILFV  178 (233)
T ss_dssp             CGGGEEEE
T ss_pred             CcccEEEE
Confidence            99999986

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.83  E-value=1.8e-20  Score=150.46  Aligned_cols=158  Identities=16%  Similarity=0.120  Sum_probs=110.7

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHH----HhC-CCHHHHHHHHHhcCCCCCCCCcHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELL----KIG-GGKERMTAYFNKTGWPEKAPSDEE  149 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~  149 (262)
                      |++|+|+||+||||+|+..  ...++.++++++|+.... ........    ..+ ...+.+...+... ...  .....
T Consensus         2 M~~k~viFDlDGTL~d~~~--~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~   75 (200)
T 3cnh_A            2 MTIKALFWDIGGVLLTNGW--DREQRADVAQRFGLDTDD-FTERHRLAAPELELGRMTLAEYLEQVVFY-QPR--DFTPE   75 (200)
T ss_dssp             CCCCEEEECCBTTTBCCSS--CHHHHHHHHHHHTCCHHH-HHHHHHHHHHHHHTTSSCHHHHHHHHTTT-SCC--SSCHH
T ss_pred             CCceEEEEeCCCeeECCCc--chHHHHHHHHHcCCCHHH-HHHHHHhhchHHHcCCcCHHHHHHHHHHH-cCC--CCCHH
Confidence            4589999999999999875  345788888888875421 11111110    011 1122222211100 000  00110


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC
Q 024806          150 ERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV  229 (262)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~  229 (262)
                                     .+.+.+.. ...++||+.++|+.|+++| +++|+||++...++..++.+|+.++|+  .++++++
T Consensus        76 ---------------~~~~~~~~-~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~--~~~~~~~  136 (200)
T 3cnh_A           76 ---------------DFRAVMEE-QSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLL--AFFTSSA  136 (200)
T ss_dssp             ---------------HHHHHHHH-TCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCS--CEEEHHH
T ss_pred             ---------------HHHHHHHh-cCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcc--eEEeecc
Confidence                           11111112 2569999999999999999 999999999999999999999999999  8999999


Q ss_pred             CCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          230 VPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       230 ~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++..||+|++|     +.+++.+|++|+++++|
T Consensus       137 ~~~~Kp~~~~~-----~~~~~~~~~~~~~~~~v  164 (200)
T 3cnh_A          137 LGVMKPNPAMY-----RLGLTLAQVRPEEAVMV  164 (200)
T ss_dssp             HSCCTTCHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             cCCCCCCHHHH-----HHHHHHcCCCHHHeEEe
Confidence            99999999999     88999999999999986

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.83  E-value=4e-20  Score=151.11  Aligned_cols=82  Identities=17%  Similarity=0.188  Sum_probs=78.0

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ...++||+.++|+.|+++|++++|+||++...++..++.+|+.++|+  .++++++++..||+|.+|     +.+++.+|
T Consensus        94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~-----~~~~~~~~  166 (230)
T 3um9_A           94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD--HLISVDEVRLFKPHQKVY-----ELAMDTLH  166 (230)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS--EEEEGGGTTCCTTCHHHH-----HHHHHHHT
T ss_pred             cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc--eeEehhhcccCCCChHHH-----HHHHHHhC
Confidence            47889999999999999999999999999999999999999999999  899999999999999999     88999999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|+++++|
T Consensus       167 ~~~~~~~~i  175 (230)
T 3um9_A          167 LGESEILFV  175 (230)
T ss_dssp             CCGGGEEEE
T ss_pred             CCcccEEEE
Confidence            999999986

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.83  E-value=3.8e-20  Score=151.88  Aligned_cols=81  Identities=20%  Similarity=0.240  Sum_probs=77.0

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+++|++++|+||++...++..++.+|+.++|+  .++++++++..||+|++|     +.+++++|+
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~-----~~~~~~~~~  166 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPVQVYKPDNRVY-----ELAEQALGL  166 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEESGGGTCCTTSHHHH-----HHHHHHHTS
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhh--eEEEecccCCCCCCHHHH-----HHHHHHcCC
Confidence            6789999999999999999999999999999999999999999999  899999999999999999     889999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|+++++|
T Consensus       167 ~~~~~~~i  174 (232)
T 1zrn_A          167 DRSAILFV  174 (232)
T ss_dssp             CGGGEEEE
T ss_pred             CcccEEEE
Confidence            99999986

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.82  E-value=7.6e-20  Score=147.59  Aligned_cols=146  Identities=14%  Similarity=0.150  Sum_probs=106.8

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (262)
                      ++++|+|+||+||||+|+...     |.++++++|+....  +....+              ...        .... .+
T Consensus         3 ~~~~k~iifDlDGTL~d~~~~-----~~~~~~~~g~~~~~--~~~~~~--------------~~~--------~~~~-~~   52 (205)
T 3m9l_A            3 LSEIKHWVFDMDGTLTIAVHD-----FAAIREALSIPAED--DILTHL--------------AAL--------PADE-SA   52 (205)
T ss_dssp             GGGCCEEEECTBTTTEEEEEC-----HHHHHHHTTCCTTS--CHHHHH--------------HHS--------CHHH-HH
T ss_pred             cccCCEEEEeCCCcCcccHHH-----HHHHHHHhCCCchH--HHHHHH--------------hcC--------ChHH-HH
Confidence            467999999999999998775     44677777776542  111111              100        0100 01


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc--ccceEEeCCCCC
Q 024806          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA--EKIQIFAGDVVP  231 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f--~~~~Iv~s~~~~  231 (262)
                      ....+.    +.+...+. ....++||+.++|+.|+++|++++|+||+....++..++.+|+.++|  +  .+++++. +
T Consensus        53 ~~~~~~----~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--~i~~~~~-~  124 (205)
T 3m9l_A           53 AKHAWL----LEHERDLA-QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEA--DVLGRDE-A  124 (205)
T ss_dssp             HHHHHH----HHTHHHHE-EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGG--GEECTTT-S
T ss_pred             HHHHHH----HHHHHHHh-hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcc--eEEeCCC-C
Confidence            111111    11222221 23678999999999999999999999999999999999999999999  6  6787776 8


Q ss_pred             CCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          232 RKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       232 ~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ..||+|++|     +.+++++|++|+++++|
T Consensus       125 ~~kp~~~~~-----~~~~~~~g~~~~~~i~i  150 (205)
T 3m9l_A          125 PPKPHPGGL-----LKLAEAWDVSPSRMVMV  150 (205)
T ss_dssp             CCTTSSHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             CCCCCHHHH-----HHHHHHcCCCHHHEEEE
Confidence            999999999     88999999999999986

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.82  E-value=8.8e-20  Score=150.67  Aligned_cols=81  Identities=21%  Similarity=0.301  Sum_probs=77.3

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+++|++++|+||+....++..++.+|+.++|+  .++++++++..||+|++|     +.+++++|+
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~-----~~~~~~~~~  176 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD--SCLSADDLKIYKPDPRIY-----QFACDRLGV  176 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGTTCCTTSHHHH-----HHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcC--EEEEccccCCCCCCHHHH-----HHHHHHcCC
Confidence            6899999999999999999999999999999999999999999999  899999999999999999     889999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|+++++|
T Consensus       177 ~~~~~~~i  184 (240)
T 2no4_A          177 NPNEVCFV  184 (240)
T ss_dssp             CGGGEEEE
T ss_pred             CcccEEEE
Confidence            99999986

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.82  E-value=1.5e-19  Score=146.82  Aligned_cols=165  Identities=18%  Similarity=0.282  Sum_probs=120.0

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHH-HHHhcCCCCCCCCcHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      ++|+|+||+||||+|+... +..++.++++++|..... .+.+...  .|........ .+...++..   ...   .+.
T Consensus         8 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~~---~~~---~~~   77 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISR-RNELPDT--LGLRIDMVVDLWYARQPWNG---PSR---QEV   77 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCGGG-GGGSCCC--TTCCHHHHHHHHHHHSCCSS---SCH---HHH
T ss_pred             CCCEEEECCCCCcCcCHHH-HHHHHHHHHHHcCCCCCh-HHHHHHH--hCCCHHHHHHHHHHHcCCCc---cCH---HHH
Confidence            5899999999999999885 777888999998876431 1222111  3444443333 333333321   111   122


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      ...+..    .+.+.+.. ...++||+.++|+.|++.|++++++||.....++..++.+++..+|+  .++++++.+..|
T Consensus        78 ~~~~~~----~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~k  150 (226)
T 1te2_A           78 VERVIA----RAISLVEE-TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD--ALASAEKLPYSK  150 (226)
T ss_dssp             HHHHHH----HHHHHHHH-HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEECTTSSCCT
T ss_pred             HHHHHH----HHHHHHhc-cCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc--EEEeccccCCCC
Confidence            222222    22222222 26789999999999999999999999999999999999999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|..|     +.+++.+|++|+++++|
T Consensus       151 p~~~~~-----~~~~~~~~i~~~~~i~i  173 (226)
T 1te2_A          151 PHPQVY-----LDCAAKLGVDPLTCVAL  173 (226)
T ss_dssp             TSTHHH-----HHHHHHHTSCGGGEEEE
T ss_pred             CChHHH-----HHHHHHcCCCHHHeEEE
Confidence            999999     88999999999999875

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.82  E-value=5.1e-20  Score=168.30  Aligned_cols=164  Identities=16%  Similarity=0.144  Sum_probs=104.3

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |++|+||||+||||++....   .++......+++...    .+...+..+.....+....... .     ..+.....+
T Consensus         1 M~~k~viFD~DGTL~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~   67 (555)
T 3i28_A            1 MTLRAAVFDLDGVLALPAVF---GVLGRTEEALALPRG----LLNDAFQKGGPEGATTRLMKGE-I-----TLSQWIPLM   67 (555)
T ss_dssp             ---CEEEECTBTTTEESCTH---HHHHHHHHHTTCCTT----HHHHHHHTTGGGSHHHHHHTTS-S-----CHHHHHHHH
T ss_pred             CceEEEEEecCCeeecchhH---HHHHHHHHHhCCcHH----HHHHHHhccCcccchhHHhcCC-C-----CHHHHHHHH
Confidence            46899999999999977643   467777777776532    2222211222222222222111 0     111111111


Q ss_pred             HHHHHHH-------------HHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCC------CHHHHHHHHHHhcC
Q 024806          155 IASLHKR-------------KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTS------NEKAVTAIVSFLLG  215 (262)
Q Consensus       155 ~~~~~~~-------------~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~------~~~~~~~~L~~~~l  215 (262)
                      ...+...             ..+.+.+...  ...++||+.++|+.|+++|++++|+||+      ....+...+.  ++
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l  143 (555)
T 3i28_A           68 EENCRKCSETAKVCLPKNFSIKEIFDKAIS--ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--EL  143 (555)
T ss_dssp             HHHHHHHHHHTTCCCCTTCCHHHHHHHHHH--HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HH
T ss_pred             HHHHHHhhhccCCCCCccccHHHHHHHhHh--hcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hh
Confidence            1111100             2233333332  2689999999999999999999999998      4333333332  67


Q ss_pred             CCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          216 PERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       216 ~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .++|+  .|+++++++..||+|++|     +.+++++|++|++|++|
T Consensus       144 ~~~fd--~i~~~~~~~~~KP~p~~~-----~~~~~~lg~~p~~~~~v  183 (555)
T 3i28_A          144 KMHFD--FLIESCQVGMVKPEPQIY-----KFLLDTLKASPSEVVFL  183 (555)
T ss_dssp             HTTSS--EEEEHHHHTCCTTCHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             hhhee--EEEeccccCCCCCCHHHH-----HHHHHHcCCChhHEEEE
Confidence            88999  899999999999999999     88999999999999986

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.81  E-value=1e-19  Score=144.58  Aligned_cols=155  Identities=15%  Similarity=0.168  Sum_probs=112.1

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |++|+|+||+||||+|+... +..++.++++++|+...  .+.+.... .+.....+...+..         ...    +
T Consensus         4 M~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~-~~~~~~~~~~~~~~---------~~~----~   66 (190)
T 2fi1_A            4 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGITQD--HDSVYQAL-KVSTPFAIETFAPN---------LEN----F   66 (190)
T ss_dssp             CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHHH-HHCHHHHHHHHCTT---------CTT----H
T ss_pred             CcccEEEEeCCCCcCCCHHH-HHHHHHHHHHHhCCCCC--HHHHHHHH-ccccHHHHHHHhhh---------HHH----H
Confidence            35899999999999999885 77889999999887643  34433331 22222222222110         010    1


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      ...+    .+.+.+... . ..++||+.++|+.|+++|++++++||.. ..++..++.+++.++|+  .++++++++..|
T Consensus        67 ~~~~----~~~~~~~~~-~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~~f~--~~~~~~~~~~~k  137 (190)
T 2fi1_A           67 LEKY----KENEARELE-H-PILFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAAYFT--EVVTSSSGFKRK  137 (190)
T ss_dssp             HHHH----HHHHHHHTT-S-CCBCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGGGEE--EEECGGGCCCCT
T ss_pred             HHHH----HHHHHHhcC-c-CccCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHhhee--eeeeccccCCCC
Confidence            1111    122222222 2 3489999999999999999999999987 47889999999999999  889999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     +.+++.+|++  ++++|
T Consensus       138 p~~~~~-----~~~~~~~~~~--~~~~i  158 (190)
T 2fi1_A          138 PNPESM-----LYLREKYQIS--SGLVI  158 (190)
T ss_dssp             TSCHHH-----HHHHHHTTCS--SEEEE
T ss_pred             CCHHHH-----HHHHHHcCCC--eEEEE
Confidence            999999     8889999996  88775

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.81  E-value=4.1e-19  Score=148.82  Aligned_cols=167  Identities=15%  Similarity=0.170  Sum_probs=117.8

Q ss_pred             CCCcEEEEecCccccccCc-chHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHH-----------hcCCCC
Q 024806           75 VLPSALLFDCDGVLVDTEK-DGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-----------KTGWPE  142 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~  142 (262)
                      |++|+|+||+||||+|+.. . +..++.++++++|+...  .+.+...  .|.........+.           ..+.. 
T Consensus         4 m~ik~i~fDlDGTLld~~~~~-~~~~~~~~l~~~G~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-   77 (267)
T 1swv_A            4 MKIEAVIFAWAGTTVDYGCFA-PLEVFMEIFHKRGVAIT--AEEARKP--MGLLKIDHVRALTEMPRIASEWNRVFRQL-   77 (267)
T ss_dssp             -CCCEEEECSBTTTBSTTCCT-THHHHHHHHHTTTCCCC--HHHHHTT--TTSCHHHHHHHHHHSHHHHHHHHHHHSSC-
T ss_pred             CCceEEEEecCCCEEeCCCcc-HHHHHHHHHHHcCCCCC--HHHHHHH--hccchHHHHHHhcccHHHHHHHHHHhCCC-
Confidence            4689999999999999887 4 56789999999887643  3333332  3333322222111           11111 


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc-cc
Q 024806          143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EK  221 (262)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f-~~  221 (262)
                         ........+...+    .+.+..... ....++||+.++|+.|+++|++++++||.....+...++.+++.++| + 
T Consensus        78 ---~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~-  148 (267)
T 1swv_A           78 ---PTEADIQEMYEEF----EEILFAILP-RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD-  148 (267)
T ss_dssp             ---CCHHHHHHHHHHH----HHHHHHHGG-GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS-
T ss_pred             ---CCHHHHHHHHHHH----HHHHHHhhc-cccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChH-
Confidence               1222222222222    222222222 23678999999999999999999999999999999999999888886 7 


Q ss_pred             ceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCC-cccccC
Q 024806          222 IQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHA-HKNVLV  262 (262)
Q Consensus       222 ~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p-~e~v~I  262 (262)
                       .++++++++..||+|++|     ..+++.+|++| +++++|
T Consensus       149 -~~~~~~~~~~~kp~~~~~-----~~~~~~lgi~~~~~~i~i  184 (267)
T 1swv_A          149 -FLVTPDDVPAGRPYPWMC-----YKNAMELGVYPMNHMIKV  184 (267)
T ss_dssp             -CCBCGGGSSCCTTSSHHH-----HHHHHHHTCCSGGGEEEE
T ss_pred             -heecCCccCCCCCCHHHH-----HHHHHHhCCCCCcCEEEE
Confidence             788889999999999999     88899999999 899875

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.81  E-value=2.5e-20  Score=150.72  Aligned_cols=164  Identities=14%  Similarity=0.140  Sum_probs=106.8

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      +|+|+|+||+||||+|+... ..   ...+.++|....  .+.+..+  .+.+.   ...+.. |..    ...+....+
T Consensus         3 ~m~k~iiFDlDGTL~d~~~~-~~---~~~~~~~g~~~~--~~~~~~~--~~~~~---~~~~~~-g~~----~~~~~~~~~   66 (211)
T 2i6x_A            3 AMIRNIVFDLGGVLIHLNRE-ES---IRRFKAIGVADI--EEMLDPY--LQKGL---FLDLES-GRK----SEEEFRTEL   66 (211)
T ss_dssp             CCCSEEEECSBTTTEEECHH-HH---HHHHHHTTCTTH--HHHTCC-----CCH---HHHHHH-SSS----CHHHHHHHH
T ss_pred             ccceEEEEeCCCeeEecchH-HH---HHHHHHhCCchH--HHHHHHH--hCchH---HHHHHc-CCC----CHHHHHHHH
Confidence            56899999999999999874 22   556666666531  1222211  11111   111111 100    011111111


Q ss_pred             HHHHHH-HHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH------hcCCCCcccceEEeC
Q 024806          155 IASLHK-RKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF------LLGPERAEKIQIFAG  227 (262)
Q Consensus       155 ~~~~~~-~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~------~~l~~~f~~~~Iv~s  227 (262)
                      ...+.. ...+.+.+.+......++||+.++|+.|++ |++++|+||++...++..++.      +|+..+|+  .++++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~--~~~~~  143 (211)
T 2i6x_A           67 SRYIGKELTYQQVYDALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFD--KVYAS  143 (211)
T ss_dssp             HHHHTSCCCHHHHHHHHGGGEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSS--EEEEH
T ss_pred             HHHhCCCCCHHHHHHHHHHhhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcC--eEEee
Confidence            111110 000011111222234689999999999999 999999999999999999998      79999999  89999


Q ss_pred             CCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          228 DVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       228 ~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++++..||+|++|     +.+++++|++|++|++|
T Consensus       144 ~~~~~~Kp~~~~~-----~~~~~~~~~~~~~~~~i  173 (211)
T 2i6x_A          144 CQMGKYKPNEDIF-----LEMIADSGMKPEETLFI  173 (211)
T ss_dssp             HHHTCCTTSHHHH-----HHHHHHHCCCGGGEEEE
T ss_pred             cccCCCCCCHHHH-----HHHHHHhCCChHHeEEe
Confidence            9999999999999     88999999999999986

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.81  E-value=1.1e-19  Score=149.20  Aligned_cols=155  Identities=14%  Similarity=0.124  Sum_probs=106.3

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHH--------HhC-CCHHHHHHHHH-hcCCCCCC
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELL--------KIG-GGKERMTAYFN-KTGWPEKA  144 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~-~~~~~~~~  144 (262)
                      +++|+|+||+||||+|+...    .+.+.+.++|+...  .+.+..+.        ..| ...+.+...+. ..+.+   
T Consensus        26 ~~ik~viFD~DGTL~d~~~~----~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---   96 (229)
T 4dcc_A           26 KGIKNLLIDLGGVLINLDRE----RCIENFKKIGFQNI--EEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKM---   96 (229)
T ss_dssp             CCCCEEEECSBTTTBCBCHH----HHHHHHHHHTCTTH--HHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSC---
T ss_pred             CCCCEEEEeCCCeEEeCChH----HHHHHHHHhCCCcH--HHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCC---
Confidence            35899999999999997742    55677777777621  22222210        011 11222222111 11110   


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH------HHhcCCCC
Q 024806          145 PSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIV------SFLLGPER  218 (262)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L------~~~~l~~~  218 (262)
                       ...               +.+.+.+......++||+.++|+.|+++ ++++|+||++...++.++      +.+|+.++
T Consensus        97 -~~~---------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~  159 (229)
T 4dcc_A           97 -VSD---------------KQIDAAWNSFLVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY  159 (229)
T ss_dssp             -CCH---------------HHHHHHHHTTBCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH
T ss_pred             -CCH---------------HHHHHHHHHHHHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh
Confidence             001               1111222222346789999999999998 999999999998888655      66788889


Q ss_pred             cccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          219 AEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       219 f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+  .++++++++..||+|++|     +.+++++|++|++|++|
T Consensus       160 fd--~i~~~~~~~~~KP~~~~~-----~~~~~~~g~~~~~~~~v  196 (229)
T 4dcc_A          160 FE--KTYLSYEMKMAKPEPEIF-----KAVTEDAGIDPKETFFI  196 (229)
T ss_dssp             CS--EEEEHHHHTCCTTCHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             CC--EEEeecccCCCCCCHHHH-----HHHHHHcCCCHHHeEEE
Confidence            99  899999999999999999     88999999999999986

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.81  E-value=1.8e-19  Score=149.87  Aligned_cols=160  Identities=15%  Similarity=0.037  Sum_probs=111.1

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHH---HHccCCC--CCC----HHHHHHHHHhCCCHHHHHHHHH-----hcCCC
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTF---KEKELGV--TWD----VDLYGELLKIGGGKERMTAYFN-----KTGWP  141 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~---~~~g~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  141 (262)
                      ++|+|+||+||||+|+... +..++.+++   .++|+..  ...    ...+......|.+...+...+.     ..+..
T Consensus        12 ~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   90 (251)
T 2pke_A           12 AIQLVGFDGDDTLWKSEDY-YRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEAR   90 (251)
T ss_dssp             SCCEEEECCBTTTBCCHHH-HHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTC
T ss_pred             ceeEEEEeCCCCCccCcHh-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCC
Confidence            6899999999999999986 777888777   4566654  111    1122221135666555444332     11111


Q ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCccc
Q 024806          142 EKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK  221 (262)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~  221 (262)
                          .....    ...+    .+.|.+.. .....++||+.++|+.|+ +|++++|+||+....+...++.+++.++|+ 
T Consensus        91 ----~~~~~----~~~~----~~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~-  155 (251)
T 2pke_A           91 ----IEARD----IQRI----VEIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP-  155 (251)
T ss_dssp             ----CCHHH----HHHH----HHHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC-
T ss_pred             ----CChHH----HHHH----HHHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc-
Confidence                11211    1111    22222222 234788999999999999 999999999999999999999999999999 


Q ss_pred             ceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          222 IQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       222 ~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                       .++++     .||+|++|     ..+++.+|++|+++++|
T Consensus       156 -~i~~~-----~kp~~~~~-----~~~~~~l~~~~~~~i~i  185 (251)
T 2pke_A          156 -RIEVV-----SEKDPQTY-----ARVLSEFDLPAERFVMI  185 (251)
T ss_dssp             -CEEEE-----SCCSHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             -eeeee-----CCCCHHHH-----HHHHHHhCcCchhEEEE
Confidence             67663     58999999     88999999999999986

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.80  E-value=5.6e-20  Score=152.63  Aligned_cols=170  Identities=19%  Similarity=0.122  Sum_probs=115.2

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (262)
                      .|++|+|+||+||||+|+... +..++.++++++|+.... .+....+  .+.....+....... ...  ........+
T Consensus        19 ~m~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~--~~~~~~~~~~~~~~~-~~~--~~~~~~~~~   91 (254)
T 3umc_A           19 FQGMRAILFDVFGTLVDWRSS-LIEQFQALERELGGTLPC-VELTDRW--RQQYKPAMDRVRNGQ-APW--QHLDQLHRQ   91 (254)
T ss_dssp             SSSCCEEEECCBTTTEEHHHH-HHHHHHHHHHHSSSCCCH-HHHHHHH--HHHTHHHHHHHHTTS-SCC--CCHHHHHHH
T ss_pred             ccCCcEEEEeCCCccEecCcc-HHHHHHHHHHHhcCCCCH-HHHHHHH--HHHHHHHHHHHhccc-CCc--ccHHHHHHH
Confidence            467999999999999999885 778899999999887542 1222222  221222222222211 000  011111111


Q ss_pred             HHHHHHHHH--------HHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEE
Q 024806          154 FIASLHKRK--------TELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF  225 (262)
Q Consensus       154 ~~~~~~~~~--------~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv  225 (262)
                      .+..+....        .+.+....  ....++||+.++|+.|++. ++++|+||.....++.+++.+|+.  |+  .++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~--~~~  164 (254)
T 3umc_A           92 SLEALAGEFGLALDEALLQRITGFW--HRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WD--MLL  164 (254)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHGGG--GSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CS--EEC
T ss_pred             HHHHHHHHhCCCCCHHHHHHHHHHH--hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cc--eEE
Confidence            111111110        01111111  2367899999999999986 999999999999999999999885  88  889


Q ss_pred             eCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          226 AGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       226 ~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++++++..||+|++|     +.+++++|++|+++++|
T Consensus       165 ~~~~~~~~kp~~~~~-----~~~~~~lgi~~~~~~~i  196 (254)
T 3umc_A          165 CADLFGHYKPDPQVY-----LGACRLLDLPPQEVMLC  196 (254)
T ss_dssp             CHHHHTCCTTSHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             eecccccCCCCHHHH-----HHHHHHcCCChHHEEEE
Confidence            999999999999999     88999999999999986

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.80  E-value=5.5e-19  Score=146.15  Aligned_cols=170  Identities=16%  Similarity=0.124  Sum_probs=115.5

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (262)
                      ++++|+|+||+||||+|+... +..++.++++++|+.... .+....+  .+.....+....... ...  ........+
T Consensus        12 ~~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~--~~~~~~~~~~~~~~~-~~~--~~~~~~~~~   84 (254)
T 3umg_A           12 GRNVRAVLFDTFGTVVDWRTG-IATAVADYAARHQLEVDA-VAFADRW--RARYQPSMDAILSGA-REF--VTLDILHRE   84 (254)
T ss_dssp             CSBCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCCCCH-HHHHHHH--HTTHHHHHHHHHTTS-SCC--CCHHHHHHH
T ss_pred             CCCceEEEEeCCCceecCchH-HHHHHHHHHHHhcCCCCH-HHHHHHH--HHhHHHHHHHHHhcC-CCC--CCHHHHHHH
Confidence            467999999999999999885 778899999999887542 2222222  232222222222111 000  011111111


Q ss_pred             HHHHHHHH-----------HHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccc
Q 024806          154 FIASLHKR-----------KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI  222 (262)
Q Consensus       154 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~  222 (262)
                      ....+.+.           ..+.+...+  ....++||+.++|+.|+++ ++++++||+....++..++.+|+.  |+  
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~--  157 (254)
T 3umg_A           85 NLDFVLRESGIDPTNHDSGELDELARAW--HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WD--  157 (254)
T ss_dssp             HHHHHHHHTTCCGGGSCHHHHHHHHGGG--GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CS--
T ss_pred             HHHHHHHHhCCCcCcCCHHHHHHHHHHH--hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--ee--
Confidence            11111110           001111111  2467899999999999997 999999999999999999999885  88  


Q ss_pred             eEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          223 QIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       223 ~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .++++++++..||+|.+|     +.+++++|++|+++++|
T Consensus       158 ~~~~~~~~~~~kp~~~~~-----~~~~~~lgi~~~~~~~i  192 (254)
T 3umg_A          158 VIIGSDINRKYKPDPQAY-----LRTAQVLGLHPGEVMLA  192 (254)
T ss_dssp             CCCCHHHHTCCTTSHHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             EEEEcCcCCCCCCCHHHH-----HHHHHHcCCChHHEEEE
Confidence            789999999999999999     88999999999999986

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.79  E-value=1.3e-18  Score=147.26  Aligned_cols=162  Identities=8%  Similarity=0.009  Sum_probs=108.5

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHc---cCCCCCCHHHHHHHHH--hCCCHHHHHHHHHhcCCCCCCCCcHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK---ELGVTWDVDLYGELLK--IGGGKERMTAYFNKTGWPEKAPSDEE  149 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (262)
                      .++|+|+||+||||+|+... +..++.+++.++   ++...  .........  .......+...+...+.      ...
T Consensus        55 ~~~k~i~FDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~  125 (282)
T 3nuq_A           55 PNLKVFFFDIDNCLYKSSTR-IHDLMQQSILRFFQTHLKLS--PEDAHVLNNSYYKEYGLAIRGLVMFHKV------NAL  125 (282)
T ss_dssp             CCCCEEEECCTTTTSCCCHH-HHHHHHHHHHHHHHHCTTSC--HHHHHHHHHHHHHHTHHHHHHHHHTTSS------CHH
T ss_pred             CCCCEEEEecCCCcccCCcc-HHHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHHhhhHHHHHHHcCC------CHH
Confidence            46899999999999999875 555666655553   22222  122211100  00001112223332221      111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeC
Q 024806          150 ERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV--KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~--~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s  227 (262)
                         ++...+    .+.. .  ......++||+.++|+.|+++|+  +++|+||+....++..++.+|+.++|+  .++++
T Consensus       126 ---~~~~~~----~~~~-~--~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd--~v~~~  193 (282)
T 3nuq_A          126 ---EYNRLV----DDSL-P--LQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFD--GLTYC  193 (282)
T ss_dssp             ---HHHHHH----TTTS-C--GGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCS--EEECC
T ss_pred             ---HHHHHH----hhhh-h--hhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccc--eEEEe
Confidence               111111    1100 0  01237789999999999999999  999999999999999999999999999  88887


Q ss_pred             CCC----CCCCCChHHHhhhhhhhhhhhcccCC-cccccC
Q 024806          228 DVV----PRKKPDPVKICSLTVDIVCNVLKTHA-HKNVLV  262 (262)
Q Consensus       228 ~~~----~~~KPdp~~~~~~~~~~a~~~lgv~p-~e~v~I  262 (262)
                      ++.    +..||+|++|     +.+++++|++| +++++|
T Consensus       194 ~~~~~~~~~~Kp~~~~~-----~~~~~~lgi~~~~~~i~v  228 (282)
T 3nuq_A          194 DYSRTDTLVCKPHVKAF-----EKAMKESGLARYENAYFI  228 (282)
T ss_dssp             CCSSCSSCCCTTSHHHH-----HHHHHHHTCCCGGGEEEE
T ss_pred             ccCCCcccCCCcCHHHH-----HHHHHHcCCCCcccEEEE
Confidence            765    5679999999     88999999998 999886

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.79  E-value=6.5e-19  Score=143.75  Aligned_cols=162  Identities=17%  Similarity=0.182  Sum_probs=116.6

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  152 (262)
                      |+++|+|+||+||||+|+... +..++.++++++|..... .+.+...  .+......... +...+...    ......
T Consensus         1 M~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~~----~~~~~~   72 (229)
T 2fdr_A            1 MSGFDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYPISV-EEMGERF--AGMTWKNILLQVESEASIPL----SASLLD   72 (229)
T ss_dssp             --CCSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCCCH-HHHHHHH--TTCCHHHHHHHHHHHHCCCC----CTHHHH
T ss_pred             CCCccEEEEcCCCCcCccHHH-HHHHHHHHHHHhCCCCCH-HHHHHHH--hCCCHHHHHHHHHHHcCCCC----CHHHHH
Confidence            346899999999999999885 777888999998876431 2333333  45554444433 33333321    121111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc-ccceEEeCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EKIQIFAGDVVP  231 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f-~~~~Iv~s~~~~  231 (262)
                          .+..    .|.+.... ...++||+.++|+.|+.   +++|+||+....++..++.+++..+| +  .++++++++
T Consensus        73 ----~~~~----~~~~~~~~-~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~--~~~~~~~~~  138 (229)
T 2fdr_A           73 ----KSEK----LLDMRLER-DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAP--HIYSAKDLG  138 (229)
T ss_dssp             ----HHHH----HHHHHHHH-HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTT--CEEEHHHHC
T ss_pred             ----HHHH----HHHHHhhc-CCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccc--eEEeccccc
Confidence                1222    22221111 26789999999998863   99999999999999999999999999 8  789998888


Q ss_pred             CC--CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          232 RK--KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       232 ~~--KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ..  ||+|.+|     +.+++.+|++|+++++|
T Consensus       139 ~~~~kpk~~~~-----~~~~~~l~~~~~~~i~i  166 (229)
T 2fdr_A          139 ADRVKPKPDIF-----LHGAAQFGVSPDRVVVV  166 (229)
T ss_dssp             TTCCTTSSHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             cCCCCcCHHHH-----HHHHHHcCCChhHeEEE
Confidence            89  9999999     88999999999999875

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.79  E-value=1.7e-19  Score=147.80  Aligned_cols=80  Identities=18%  Similarity=0.184  Sum_probs=76.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+++ ++++|+||+....+...++.+|+.++|+  .++++++++..||+|.+|     +.+++.+|+
T Consensus        99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~--~~~~~~~~~~~kp~~~~~-----~~~~~~~~~  170 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFD--SITTSEEAGFFKPHPRIF-----ELALKKAGV  170 (234)
T ss_dssp             CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEHHHHTBCTTSHHHH-----HHHHHHHTC
T ss_pred             CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcc--eeEeccccCCCCcCHHHH-----HHHHHHcCC
Confidence            67899999999999999 9999999999999999999999999999  899999999999999999     889999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|+++++|
T Consensus       171 ~~~~~~~v  178 (234)
T 3u26_A          171 KGEEAVYV  178 (234)
T ss_dssp             CGGGEEEE
T ss_pred             CchhEEEE
Confidence            99999886

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.79  E-value=2.6e-20  Score=150.00  Aligned_cols=81  Identities=21%  Similarity=0.232  Sum_probs=73.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~-~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ..++||+.++|+.|+++|++++|+||++...++..++. +|+.++|+  .++++++++..||+|++|     ..+++.+|
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~-----~~~~~~~~  162 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAAD--HIYLSQDLGMRKPEARIY-----QHVLQAEG  162 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCS--EEEEHHHHTCCTTCHHHH-----HHHHHHHT
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhhee--eEEEecccCCCCCCHHHH-----HHHHHHcC
Confidence            57899999999999999999999999987777776766 77888999  899999999999999999     88999999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|+++++|
T Consensus       163 ~~~~~~~~v  171 (206)
T 2b0c_A          163 FSPSDTVFF  171 (206)
T ss_dssp             CCGGGEEEE
T ss_pred             CCHHHeEEe
Confidence            999999986

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.78  E-value=1.9e-18  Score=143.99  Aligned_cols=79  Identities=20%  Similarity=0.214  Sum_probs=75.0

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+  |++++|+||++...++..++.+|+..+|+  .++++++++..||+|++|     +.+++++|+
T Consensus        92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~~Kp~~~~~-----~~~~~~~~~  162 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD--AVISVDAKRVFKPHPDSY-----ALVEEVLGV  162 (253)
T ss_dssp             CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTSHHHH-----HHHHHHHCC
T ss_pred             CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhcc--EEEEccccCCCCCCHHHH-----HHHHHHcCC
Confidence            678999999999998  89999999999999999999999999999  899999999999999999     889999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|++|++|
T Consensus       163 ~~~~~~~v  170 (253)
T 1qq5_A          163 TPAEVLFV  170 (253)
T ss_dssp             CGGGEEEE
T ss_pred             CHHHEEEE
Confidence            99999986

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.78  E-value=6.8e-19  Score=147.51  Aligned_cols=163  Identities=12%  Similarity=0.057  Sum_probs=99.1

Q ss_pred             CCCcEEEEecCccccccCcc------hHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhc-CCCCCCCCc
Q 024806           75 VLPSALLFDCDGVLVDTEKD------GHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT-GWPEKAPSD  147 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~------~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  147 (262)
                      +++|+||||+||||+|++..      .+...+...+.+++..... .+.+..+  .+.....+.+.+.+. +..    ..
T Consensus        29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~--~g~~~~~~~~~l~~~~~~~----~~  101 (253)
T 2g80_A           29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPV-SNILSQF--HIDNKEQLQAHILELVAKD----VK  101 (253)
T ss_dssp             CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHH-HHHHHTT--CCCCHHHHHHHHHHHHHTT----CC
T ss_pred             CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHH-HHHHHHh--hhccHHHHHHHHHHHHhcc----cc
Confidence            35899999999999999742      1233444455555443210 1111111  233344444443321 110    00


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh--c---------CC
Q 024806          148 EEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL--L---------GP  216 (262)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~--~---------l~  216 (262)
                      ....++..   ...+.+.|...  ....+++||+.++|+.    |++++|+||+++..++.+++.+  |         +.
T Consensus       102 ~~~~~~~~---~~~~~~~~~~~--~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~  172 (253)
T 2g80_A          102 DPILKQLQ---GYVWAHGYESG--QIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLN  172 (253)
T ss_dssp             CHHHHHHH---HHHHHHHHHTT--SCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCG
T ss_pred             hHHHHHHH---HHHHHHHHHhC--cccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchH
Confidence            01111111   11111222110  1135789999999988    8999999999999999999976  4         66


Q ss_pred             CCcccceEEeCCCC-CCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          217 ERAEKIQIFAGDVV-PRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       217 ~~f~~~~Iv~s~~~-~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++|+  .++.+ .+ + .||+|++|     ..+++++|++|++|+||
T Consensus       173 ~~~~--~~f~~-~~~g-~KP~p~~~-----~~a~~~lg~~p~~~l~v  210 (253)
T 2g80_A          173 SYID--GYFDI-NTSG-KKTETQSY-----ANILRDIGAKASEVLFL  210 (253)
T ss_dssp             GGCC--EEECH-HHHC-CTTCHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             hhcc--eEEee-eccC-CCCCHHHH-----HHHHHHcCCCcccEEEE
Confidence            6676  55544 34 4 59999999     88999999999999986

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.78  E-value=6.3e-19  Score=149.06  Aligned_cols=160  Identities=22%  Similarity=0.157  Sum_probs=116.2

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |++|+|+||+||||+|+... +..++.++++++|. .  ..+.+... ..|.........+....      .....    
T Consensus        33 m~ik~iifDlDGTLlds~~~-~~~~~~~~~~~~g~-~--~~~~~~~~-~~G~~~~~~~~~~~~~~------~~~~~----   97 (275)
T 2qlt_A           33 LKINAALFDVDGTIIISQPA-IAAFWRDFGKDKPY-F--DAEHVIHI-SHGWRTYDAIAKFAPDF------ADEEY----   97 (275)
T ss_dssp             EEESEEEECCBTTTEECHHH-HHHHHHHHHTTCTT-C--CHHHHHHH-CTTCCHHHHHHHHCGGG------CCHHH----
T ss_pred             ccCCEEEECCCCCCCCCHHH-HHHHHHHHHHHcCC-C--CHHHHHHH-hcCCCHHHHHHHHhccC------CcHHH----
Confidence            34899999999999999986 77788898888873 1  22322222 24555544444432210      11211    


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      ...+..    .+.+.+. ....++||+.++|+.|+++ |++++|+||+....++..++.+++. +|+  .++++++++..
T Consensus        98 ~~~~~~----~~~~~~~-~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~--~i~~~~~~~~~  169 (275)
T 2qlt_A           98 VNKLEG----EIPEKYG-EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPE--YFITANDVKQG  169 (275)
T ss_dssp             HHHHHH----THHHHHC-TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCS--SEECGGGCSSC
T ss_pred             HHHHHH----HHHHHHh-cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccC--EEEEcccCCCC
Confidence            222222    2222221 2367899999999999999 9999999999999999999999876 577  78899999999


Q ss_pred             CCChHHHhhhhhhhhhhhccc-------CCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKT-------HAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv-------~p~e~v~I  262 (262)
                      ||+|++|     ..+++.+|+       +|++|++|
T Consensus       170 kp~~~~~-----~~~~~~lgi~~~~~~~~~~~~i~~  200 (275)
T 2qlt_A          170 KPHPEPY-----LKGRNGLGFPINEQDPSKSKVVVF  200 (275)
T ss_dssp             TTSSHHH-----HHHHHHTTCCCCSSCGGGSCEEEE
T ss_pred             CCChHHH-----HHHHHHcCCCccccCCCcceEEEE
Confidence            9999999     889999999       99999875

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.77  E-value=3.6e-18  Score=139.21  Aligned_cols=161  Identities=15%  Similarity=0.067  Sum_probs=107.3

Q ss_pred             CCC-CcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHH---------HHHhCCCHHHHHHH-----HHhc
Q 024806           74 SVL-PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGE---------LLKIGGGKERMTAY-----FNKT  138 (262)
Q Consensus        74 ~~~-ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~~-----~~~~  138 (262)
                      |++ +|+|+||+||||+|+... +..++..+.+.++-.-.  ...+..         ....+.+...+...     ....
T Consensus         4 M~~mik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (234)
T 3ddh_A            4 MKELIKVIAFDADDTLWSNEPF-FQEVEKQYTDLLKPYGT--SKEISAALFQTEMNNLQILGYGAKAFTISMVETALQIS   80 (234)
T ss_dssp             CTTTCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTGGGSC--HHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHT
T ss_pred             hhhcccEEEEeCCCCCccCcch-HHHHHHHHHHHHHhcCC--HHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHh
Confidence            344 899999999999999885 66666655544321111  111111         11234443332111     1111


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCC-CeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G-~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +.    ....+...++.+        .+.+... ....++||+.++|+.|+++| ++++++||.....+...++.+++.+
T Consensus        81 ~~----~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~  147 (234)
T 3ddh_A           81 NG----KIAADIIRQIVD--------LGKSLLK-MPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP  147 (234)
T ss_dssp             TT----CCCHHHHHHHHH--------HHHHHTT-CCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGG
T ss_pred             cC----CCCHHHHHHHHH--------HHHHHhh-ccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHh
Confidence            11    122222222222        2222222 24688999999999999999 9999999999999999999999999


Q ss_pred             CcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          218 RAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       218 ~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|+  .++++     .||+|++|     +.+++++|++|+++++|
T Consensus       148 ~f~--~~~~~-----~kpk~~~~-----~~~~~~lgi~~~~~i~i  180 (234)
T 3ddh_A          148 YFD--HIEVM-----SDKTEKEY-----LRLLSILQIAPSELLMV  180 (234)
T ss_dssp             GCS--EEEEE-----SCCSHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             hhh--eeeec-----CCCCHHHH-----HHHHHHhCCCcceEEEE
Confidence            999  67653     58999999     88999999999999986

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.77  E-value=2.1e-19  Score=144.50  Aligned_cols=77  Identities=18%  Similarity=0.130  Sum_probs=72.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.+ |+.|+++ ++++|+||++...++..++.+|+.++|+  .++++++++..||+|++|     ..+++++| 
T Consensus        73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~-----~~~~~~~~-  142 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFK--GIFSAESVKEYKPSPKVY-----KYFLDSIG-  142 (201)
T ss_dssp             CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTCHHHH-----HHHHHHHT-
T ss_pred             cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCc--EEEehhhcCCCCCCHHHH-----HHHHHhcC-
Confidence            678999999 9999999 9999999999999999999999999999  899999999999999999     78899999 


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                       |+++++|
T Consensus       143 -~~~~~~v  149 (201)
T 2w43_A          143 -AKEAFLV  149 (201)
T ss_dssp             -CSCCEEE
T ss_pred             -CCcEEEE
Confidence             9999886

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.76  E-value=7e-19  Score=143.82  Aligned_cols=161  Identities=17%  Similarity=0.125  Sum_probs=105.6

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHH---ccCCCC-CCHHHHHHHHH----h----CCCH-----HHHHHHHHhc
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKE---KELGVT-WDVDLYGELLK----I----GGGK-----ERMTAYFNKT  138 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~---~g~~~~-~~~~~~~~~~~----~----~~~~-----~~~~~~~~~~  138 (262)
                      |+|+|+||+||||+|+... +..+...+.+.   .+.... ...+.+.....    .    ....     ......+...
T Consensus         1 mik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (230)
T 3vay_A            1 MIKLVTFDLDDTLWDTAPA-IVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDA   79 (230)
T ss_dssp             CCCEEEECCBTTTBCSHHH-HHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTT
T ss_pred             CeeEEEecCcccCcCCchH-HHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHh
Confidence            5899999999999999875 55555554433   332221 11122211100    0    0001     1112223333


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCC
Q 024806          139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER  218 (262)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~  218 (262)
                      ++      ......+....+.    +.|.+..  ....++||+.++|+.|+++ ++++|+||++..     ++.+|+.++
T Consensus        80 ~~------~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~  141 (230)
T 3vay_A           80 GY------DSDEAQQLADESF----EVFLHGR--HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY  141 (230)
T ss_dssp             TC------CHHHHHHHHHHHH----HHHHHHH--TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG
T ss_pred             CC------ChhhhHHHHHHHH----HHHHHhh--ccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH
Confidence            32      2222222222222    2233222  2478999999999999998 999999999855     788899999


Q ss_pred             cccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          219 AEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       219 f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+  .++++++++..||+|.+|     +.+++.+|++|+++++|
T Consensus       142 f~--~~~~~~~~~~~kp~~~~~-----~~~~~~~~~~~~~~~~v  178 (230)
T 3vay_A          142 FA--FALCAEDLGIGKPDPAPF-----LEALRRAKVDASAAVHV  178 (230)
T ss_dssp             CS--EEEEHHHHTCCTTSHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             ee--eeEEccccCCCCcCHHHH-----HHHHHHhCCCchheEEE
Confidence            99  899999999999999999     88999999999999986

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.75  E-value=9.7e-19  Score=140.05  Aligned_cols=81  Identities=20%  Similarity=0.299  Sum_probs=76.3

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHHhcCCCCcccceEEeCCCC----CCCCCChHHHhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSFLLGPERAEKIQIFAGDVV----PRKKPDPVKICSLTVDI  247 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---~~~~~~L~~~~l~~~f~~~~Iv~s~~~----~~~KPdp~~~~~~~~~~  247 (262)
                      ..++||+.++|+.|+++|++++|+||++.   ..++..++.+|+.++|+  .++++++.    +..||+|++|     +.
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~~~~~~~KP~p~~~-----~~  105 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD--FIYASNSELQPGKMEKPDKTIF-----DF  105 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEE--EEEECCTTSSTTCCCTTSHHHH-----HH
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheE--EEEEccccccccCCCCcCHHHH-----HH
Confidence            67999999999999999999999999987   89999999999999999  89999886    8899999999     88


Q ss_pred             hhhhcccCCcccccC
Q 024806          248 VCNVLKTHAHKNVLV  262 (262)
Q Consensus       248 a~~~lgv~p~e~v~I  262 (262)
                      +++++|++|++++||
T Consensus       106 ~~~~~~~~~~~~l~V  120 (189)
T 3ib6_A          106 TLNALQIDKTEAVMV  120 (189)
T ss_dssp             HHHHHTCCGGGEEEE
T ss_pred             HHHHcCCCcccEEEE
Confidence            999999999999986

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.74  E-value=7.2e-19  Score=142.59  Aligned_cols=81  Identities=17%  Similarity=0.153  Sum_probs=73.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEE----------eCCCCCCCCCChHHHhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF----------AGDVVPRKKPDPVKICSLT  244 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv----------~s~~~~~~KPdp~~~~~~~  244 (262)
                      ..++||+.++|+.|+++|++++|+||+....++..++.+|+.++|+  .++          .+++....||+|++|    
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~~~~~~~~~~~~k~k~~~~----  147 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFS--NTLIVENDALNGLVTGHMMFSHSKGEML----  147 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEETTEEEEEEEESCCSTTHHHHHH----
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcc--ceeEEeCCEEEeeeccCCCCCCChHHHH----
Confidence            6799999999999999999999999999999999999999999998  565          334466789999999    


Q ss_pred             hhhhhhhcccCCcccccC
Q 024806          245 VDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       245 ~~~a~~~lgv~p~e~v~I  262 (262)
                       +.+++++|++|+++++|
T Consensus       148 -~~~~~~~g~~~~~~i~v  164 (217)
T 3m1y_A          148 -LVLQRLLNISKTNTLVV  164 (217)
T ss_dssp             -HHHHHHHTCCSTTEEEE
T ss_pred             -HHHHHHcCCCHhHEEEE
Confidence             88999999999999986

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.73  E-value=5.9e-18  Score=136.47  Aligned_cols=76  Identities=17%  Similarity=0.173  Sum_probs=65.9

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+++|++++|+||..+..+..   ..+  .+|+  .++++++++..||+|++|     ..+++++|+
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~---~~~--~~~d--~v~~~~~~~~~KP~p~~~-----~~a~~~l~~  102 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTP---LAA--PVND--WMIAAPRPTAGWPQPDAC-----WMALMALNV  102 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHH---HHT--TTTT--TCEECCCCSSCTTSTHHH-----HHHHHHTTC
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHH---hcC--ccCC--EEEECCcCCCCCCChHHH-----HHHHHHcCC
Confidence            5689999999999999999999999999776633   333  5778  899999999999999999     788999999


Q ss_pred             CC-cccccC
Q 024806          255 HA-HKNVLV  262 (262)
Q Consensus       255 ~p-~e~v~I  262 (262)
                      .| ++|+||
T Consensus       103 ~~~~~~v~V  111 (196)
T 2oda_A          103 SQLEGCVLI  111 (196)
T ss_dssp             SCSTTCEEE
T ss_pred             CCCccEEEE
Confidence            76 889886

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.72  E-value=1e-17  Score=137.02  Aligned_cols=150  Identities=18%  Similarity=0.198  Sum_probs=94.9

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCC--CHHHHHH-HHHhcCCCCCCCCcHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGG--GKERMTA-YFNKTGWPEKAPSDEEE  150 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~  150 (262)
                      ++++|+||||+||||+|+..      +.++++.+|...... +.+...  .++  ....... .+...  .    ..   
T Consensus        11 ~~~~k~viFD~DGTLvd~~~------~~~~~~~~g~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~--~----~~---   72 (225)
T 1nnl_A           11 FYSADAVCFDVDSTVIREEG------IDELAKICGVEDAVS-EMTRRA--MGGAVPFKAALTERLALI--Q----PS---   72 (225)
T ss_dssp             HHHCSEEEEETBTTTBSSCH------HHHHHHHTTCTTTC---------------CHHHHHHHHHHHH--C----CC---
T ss_pred             HhhCCEEEEeCccccccccc------HHHHHHHhCCcHHHH-HHHHHH--HcCCccHHHHHHHHHHHh--c----CC---
Confidence            35689999999999999874      346677777764322 222222  121  1111111 11100  0    00   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC--CcccceE----
Q 024806          151 RKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE--RAEKIQI----  224 (262)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~--~f~~~~I----  224 (262)
                                  .+.+.+.+.....+++||+.++|+.|+++|++++|+||+....++.+++.+|+..  +|+  .+    
T Consensus        73 ------------~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~--~~~~~~  138 (225)
T 1nnl_A           73 ------------REQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFA--NRLKFY  138 (225)
T ss_dssp             ------------HHHHHHHHHHSCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEE--ECEEEC
T ss_pred             ------------HHHHHHHHHhccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEe--eeEEEc
Confidence                        0112222222346899999999999999999999999999999999999999874  776  33    


Q ss_pred             ----EeCCCCCC----CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          225 ----FAGDVVPR----KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       225 ----v~s~~~~~----~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                          +++.+.+.    .||+|++|     +.+++.+|+  ++|+||
T Consensus       139 ~~~~~~~~~~~~~~~~~~~Kp~~~-----~~~~~~~~~--~~~~~v  177 (225)
T 1nnl_A          139 FNGEYAGFDETQPTAESGGKGKVI-----KLLKEKFHF--KKIIMI  177 (225)
T ss_dssp             TTSCEEEECTTSGGGSTTHHHHHH-----HHHHHHHCC--SCEEEE
T ss_pred             CCCcEecCCCCCcccCCCchHHHH-----HHHHHHcCC--CcEEEE
Confidence                23433332    35777888     778888998  678775

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.71  E-value=4.8e-19  Score=145.86  Aligned_cols=155  Identities=14%  Similarity=0.071  Sum_probs=98.0

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHH-HHHHHH-HhCCC-HHHHHHHHH-hcCCCCCCCCcHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVD-LYGELL-KIGGG-KERMTAYFN-KTGWPEKAPSDEEE  150 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~~~-~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~  150 (262)
                      .++|+||||+||||+|+... +..++.++++++|+....... .+.... ..|.. .......+. .....         
T Consensus         9 ~~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---------   78 (231)
T 2p11_A            9 PHDIVFLFDCDNTLLDNDHV-LADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRD---------   78 (231)
T ss_dssp             CCSEEEEECCBTTTBCHHHH-HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC---------
T ss_pred             CCCeEEEEcCCCCCEecHHH-HHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc---------
Confidence            56899999999999999996 778999999998765321000 011110 02221 111111111 10000         


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCC
Q 024806          151 RKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV  230 (262)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~  230 (262)
                        +    ..+.+.+.|....  ....++||+.++|+.|+++| +++|+||++...++..++.+|+.++|+  .++.   +
T Consensus        79 --~----~~~~~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~--~~~~---~  144 (231)
T 2p11_A           79 --T----RLLLMSSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVE--GRVL---I  144 (231)
T ss_dssp             --T----GGGGGHHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTT--TCEE---E
T ss_pred             --h----HHHHHHHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcC--eeEE---e
Confidence              0    0001112222211  13578999999999999999 999999999999999999999999998  4443   2


Q ss_pred             CCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          231 PRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       231 ~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +..|  |.++     +.+++  |++|++|+||
T Consensus       145 ~~~K--~~~~-----~~~~~--~~~~~~~~~v  167 (231)
T 2p11_A          145 YIHK--ELML-----DQVME--CYPARHYVMV  167 (231)
T ss_dssp             ESSG--GGCH-----HHHHH--HSCCSEEEEE
T ss_pred             cCCh--HHHH-----HHHHh--cCCCceEEEE
Confidence            3344  5666     44555  7899999986

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.70  E-value=2.1e-17  Score=142.82  Aligned_cols=81  Identities=11%  Similarity=0.061  Sum_probs=72.5

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEe----------CCCCCCCCCChHHHhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA----------GDVVPRKKPDPVKICSLT  244 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~----------s~~~~~~KPdp~~~~~~~  244 (262)
                      ..++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|+  .++.          +.++...||+|++|    
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~--~~l~~~dg~~tg~i~~~~~~~kpkp~~~----  251 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFS--NTVEIRDNVLTDNITLPIMNAANKKQTL----  251 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE--ECEEEETTEEEEEECSSCCCHHHHHHHH----
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEE--EEEEeeCCeeeeeEecccCCCCCCHHHH----
Confidence            7899999999999999999999999999999999999999999998  4443          33455679999999    


Q ss_pred             hhhhhhhcccCCcccccC
Q 024806          245 VDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       245 ~~~a~~~lgv~p~e~v~I  262 (262)
                       ..+++++|++|++++||
T Consensus       252 -~~~~~~lgv~~~~~i~V  268 (317)
T 4eze_A          252 -VDLAARLNIATENIIAC  268 (317)
T ss_dssp             -HHHHHHHTCCGGGEEEE
T ss_pred             -HHHHHHcCCCcceEEEE
Confidence             88899999999999986

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.70  E-value=7.9e-17  Score=133.10  Aligned_cols=78  Identities=13%  Similarity=0.116  Sum_probs=67.6

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCC--------CCCChHH-Hhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR--------KKPDPVK-ICSLTV  245 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~--------~KPdp~~-~~~~~~  245 (262)
                      ..++||+.++|+.|+++|++++|+||++...++.+++  ++.++ +  .|+++++...        .||+|.+ |     
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~--~v~~~~~~~~~~~~~~~~~kp~p~~~~-----  145 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-D--RIYCNHASFDNDYIHIDWPHSCKGTCS-----  145 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-G--GEEEEEEECSSSBCEEECTTCCCTTCC-----
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-C--eEEeeeeEEcCCceEEecCCCCccccc-----
Confidence            7899999999999999999999999999988998888  67666 6  7888876654        8999994 5     


Q ss_pred             h-------hhhhhcccCCcccccC
Q 024806          246 D-------IVCNVLKTHAHKNVLV  262 (262)
Q Consensus       246 ~-------~a~~~lgv~p~e~v~I  262 (262)
                      +       .+++++|++|++++||
T Consensus       146 ~~~~~~K~~~~~~~~~~~~~~~~v  169 (236)
T 2fea_A          146 NQCGCCKPSVIHELSEPNQYIIMI  169 (236)
T ss_dssp             SCCSSCHHHHHHHHCCTTCEEEEE
T ss_pred             cccCCcHHHHHHHHhccCCeEEEE
Confidence            3       6789999999999986

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.69  E-value=1.1e-16  Score=131.18  Aligned_cols=81  Identities=10%  Similarity=0.011  Sum_probs=64.1

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCC---------CCCCCCCChHHHhhhhhh
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD---------VVPRKKPDPVKICSLTVD  246 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~---------~~~~~KPdp~~~~~~~~~  246 (262)
                      .++||+.++|+.|+++|++++|+||+....++.+++.+|+.++|... +...+         .....++++..+     .
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~K~~~~-----~  165 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATD-PEYRDGRYTGRIEGTPSFREGKVVRV-----N  165 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECE-EEEETTEEEEEEESSCSSTHHHHHHH-----H
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcc-eEEECCEEeeeecCCCCcchHHHHHH-----H
Confidence            57999999999999999999999999999999999999998777632 11111         112345556666     6


Q ss_pred             hhhhhcc---cCCcccccC
Q 024806          247 IVCNVLK---THAHKNVLV  262 (262)
Q Consensus       247 ~a~~~lg---v~p~e~v~I  262 (262)
                      .+++.+|   ++|++|++|
T Consensus       166 ~~~~~~~~~~~~~~~~~~v  184 (232)
T 3fvv_A          166 QWLAGMGLALGDFAESYFY  184 (232)
T ss_dssp             HHHHHTTCCGGGSSEEEEE
T ss_pred             HHHHHcCCCcCchhheEEE
Confidence            7889999   999999885

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.68  E-value=1.4e-16  Score=128.44  Aligned_cols=82  Identities=12%  Similarity=0.017  Sum_probs=70.5

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCC---CCCCChHHHhhhhhhhhhh
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP---RKKPDPVKICSLTVDIVCN  250 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~---~~KPdp~~~~~~~~~~a~~  250 (262)
                      ...++||+.++|+.|+++ ++++|+||+....++.+++.+|+..+|+. .++++++..   ..||+|.+|     ..+++
T Consensus        67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~-~~~~~~~~~~~~~~~p~p~~~-----~~~l~  139 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH-KLEIDDSDRVVGYQLRQKDPK-----RQSVI  139 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE-EEEECTTSCEEEEECCSSSHH-----HHHHH
T ss_pred             hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc-eeEEcCCceEEeeecCCCchH-----HHHHH
Confidence            378999999999999999 99999999999999999999999999932 577766543   225899999     78899


Q ss_pred             hcccCCcccccC
Q 024806          251 VLKTHAHKNVLV  262 (262)
Q Consensus       251 ~lgv~p~e~v~I  262 (262)
                      .+|+.|++|+||
T Consensus       140 ~l~~~~~~~~~i  151 (206)
T 1rku_A          140 AFKSLYYRVIAA  151 (206)
T ss_dssp             HHHHTTCEEEEE
T ss_pred             HHHhcCCEEEEE
Confidence            999999999886

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.66  E-value=4.9e-16  Score=122.78  Aligned_cols=79  Identities=14%  Similarity=0.130  Sum_probs=68.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH---------------HHHHHHHHHhcCCCCcccceEE-----eCCCCCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIF-----AGDVVPRKK  234 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---------------~~~~~~L~~~~l~~~f~~~~Iv-----~s~~~~~~K  234 (262)
                      ..++||+.++|+.|+++|++++|+||++.               ..++..++.+|  .+|+  .++     ++++++..|
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~--~~~~~~~~~~~~~~~~K  101 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVD--AIFMCPHGPDDGCACRK  101 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCC--EEEEECCCTTSCCSSST
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--Ccee--EEEEcCCCCCCCCCCCC
Confidence            57899999999999999999999999986               67788888887  4555  444     357888999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     +.+++++|++|++++||
T Consensus       102 P~~~~~-----~~~~~~~~~~~~~~~~v  124 (179)
T 3l8h_A          102 PLPGMY-----RDIARRYDVDLAGVPAV  124 (179)
T ss_dssp             TSSHHH-----HHHHHHHTCCCTTCEEE
T ss_pred             CCHHHH-----HHHHHHcCCCHHHEEEE
Confidence            999999     88999999999999986

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.64  E-value=5.8e-17  Score=130.44  Aligned_cols=135  Identities=15%  Similarity=0.049  Sum_probs=91.8

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      +++|+||||+||||+|+... +..+|++++++++ .  .+.+.+     .+.+.......+.           +....++
T Consensus         2 ~~~k~viFDlDGTL~Ds~~~-~~~~~~~~~~~~~-~--~~~~~~-----~~~~~~~~~~~~~-----------~~~~~~~   61 (197)
T 1q92_A            2 GRALRVLVDMDGVLADFEGG-FLRKFRARFPDQP-F--IALEDR-----RGFWVSEQYGRLR-----------PGLSEKA   61 (197)
T ss_dssp             CCCEEEEECSBTTTBCHHHH-HHHHHHHHCTTSC-C--CCGGGC-----CSSCHHHHHHHHS-----------TTHHHHH
T ss_pred             CCceEEEEeCCCCCccCcHH-HHHHHHHHHhcCC-C--CCHHHh-----cCCcHHHHHHhcC-----------HHHHHHH
Confidence            35789999999999999996 8889999888762 1  222222     1222222211110           0111111


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHhcCCC-CcccceEEeCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPR  232 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTn~~~~~~~~~L~~~~l~~-~f~~~~Iv~s~~~~~  232 (262)
                      .        +.|.+........++||+.++|+.|+++ |++++|+||++...++..++.+|+.+ +|+            
T Consensus        62 ~--------~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~------------  121 (197)
T 1q92_A           62 I--------SIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG------------  121 (197)
T ss_dssp             H--------HHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC------------
T ss_pred             H--------HHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch------------
Confidence            1        1222110112367999999999999999 99999999999888889999998888 884            


Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                                   ..+++++|+.|++|+||
T Consensus       122 -------------~~~~~~l~~~~~~~~~v  138 (197)
T 1q92_A          122 -------------PDFLEQIVLTRDKTVVS  138 (197)
T ss_dssp             -------------GGGGGGEEECSCSTTSC
T ss_pred             -------------HHHHHHhccCCccEEEE
Confidence                         23678899999999886

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.64  E-value=8.9e-17  Score=120.97  Aligned_cols=78  Identities=15%  Similarity=0.178  Sum_probs=72.4

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCc
Q 024806          178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAH  257 (262)
Q Consensus       178 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~  257 (262)
                      +||+.++|+.|+++|++++|+||++...++..++.+|+.++|+  .++++++.+..||+|++|     +.+++++|++|+
T Consensus        20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~Kp~~~~~-----~~~~~~~~~~~~   92 (137)
T 2pr7_A           20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVD--KVLLSGELGVEKPEEAAF-----QAAADAIDLPMR   92 (137)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSS--EEEEHHHHSCCTTSHHHH-----HHHHHHTTCCGG
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhcc--EEEEeccCCCCCCCHHHH-----HHHHHHcCCCcc
Confidence            3778899999999999999999999888999999999999999  899999999999999999     888999999999


Q ss_pred             ccccC
Q 024806          258 KNVLV  262 (262)
Q Consensus       258 e~v~I  262 (262)
                      +++||
T Consensus        93 ~~~~v   97 (137)
T 2pr7_A           93 DCVLV   97 (137)
T ss_dssp             GEEEE
T ss_pred             cEEEE
Confidence            99986

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.63  E-value=5.1e-16  Score=138.96  Aligned_cols=83  Identities=14%  Similarity=0.140  Sum_probs=71.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccc-----eEEeC---CCCCCCCCChHHHhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAG---DVVPRKKPDPVKICSLTVD  246 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~-----~Iv~s---~~~~~~KPdp~~~~~~~~~  246 (262)
                      +.++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|...     .++++   +++...||+|++|     +
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~-----~  329 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATAL-----R  329 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHH-----H
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHH-----H
Confidence            689999999999999999999999999999999999999998887632     12222   3556689999999     8


Q ss_pred             hhhhhcccCCcccccC
Q 024806          247 IVCNVLKTHAHKNVLV  262 (262)
Q Consensus       247 ~a~~~lgv~p~e~v~I  262 (262)
                      .+++++|++|+++++|
T Consensus       330 ~~~~~~gi~~~~~i~v  345 (415)
T 3p96_A          330 EFAQRAGVPMAQTVAV  345 (415)
T ss_dssp             HHHHHHTCCGGGEEEE
T ss_pred             HHHHHcCcChhhEEEE
Confidence            8999999999999986

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.61  E-value=1e-15  Score=123.40  Aligned_cols=84  Identities=12%  Similarity=0.112  Sum_probs=66.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC--CCcccceEEeCCC----CCCCCCChHHHhhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP--ERAEKIQIFAGDV----VPRKKPDPVKICSLTVDIV  248 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~--~~f~~~~Iv~s~~----~~~~KPdp~~~~~~~~~~a  248 (262)
                      ..++||+.++|+.|+++|++++|+||+....++..++.+|+.  .+|....++..+.    +...||+|..+.    +.+
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l  156 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKL----SAF  156 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHH----HHH
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHH----HHH
Confidence            458899999999999999999999999999999999999884  4565322333333    356889988773    445


Q ss_pred             hhhcccCCcccccC
Q 024806          249 CNVLKTHAHKNVLV  262 (262)
Q Consensus       249 ~~~lgv~p~e~v~I  262 (262)
                      ++.+|++|+++++|
T Consensus       157 ~~~~~~~~~~~~~v  170 (219)
T 3kd3_A          157 DKAKGLIDGEVIAI  170 (219)
T ss_dssp             HHHGGGCCSEEEEE
T ss_pred             HHHhCCCCCCEEEE
Confidence            67779999999875

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.61  E-value=2.8e-17  Score=131.87  Aligned_cols=134  Identities=16%  Similarity=0.138  Sum_probs=89.9

Q ss_pred             CcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHHHH
Q 024806           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIA  156 (262)
Q Consensus        77 ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (262)
                      .++||||+||||+|+... +..+|.+++.  |++. .+.+.+..+     ........+    ++           +.. 
T Consensus         2 ~k~viFDlDGTL~Ds~~~-~~~~~~~~~~--g~~~-~~~~~~~~~-----~~~~~~~~~----~~-----------~~~-   56 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAG-LLRGFRRRFP--EEPH-VPLEQRRGF-----LAREQYRAL----RP-----------DLA-   56 (193)
T ss_dssp             CEEEEECSBTTTBCHHHH-HHHHHHHHST--TSCC-CCGGGCCSS-----CHHHHHHHH----CT-----------THH-
T ss_pred             CcEEEEECCCcCccchhH-HHHHHHHHhc--CCCC-CCHHHHHHh-----hHHHHHHHH----hH-----------HHH-
Confidence            479999999999999996 7788888876  5541 122322211     111111111    10           011 


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCC
Q 024806          157 SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (262)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KP  235 (262)
                         +.+.+.|.+........++||+.++|+.|+++ |++++|+||++...++..++.+|+   |+  .+++++       
T Consensus        57 ---~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~--~i~~~~-------  121 (193)
T 2i7d_A           57 ---DKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VE--QHLGPQ-------  121 (193)
T ss_dssp             ---HHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HH--HHHCHH-------
T ss_pred             ---HHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hh--hhcCHH-------
Confidence               11222222211012367899999999999999 999999999998899999999988   77  566532       


Q ss_pred             ChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          236 DPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       236 dp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                                  +++++|+.|++|+||
T Consensus       122 ------------~~~~~~~~~~~~~~v  136 (193)
T 2i7d_A          122 ------------FVERIILTRDKTVVL  136 (193)
T ss_dssp             ------------HHTTEEECSCGGGBC
T ss_pred             ------------HHHHcCCCcccEEEE
Confidence                        578899999999986

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.60  E-value=1.6e-15  Score=120.00  Aligned_cols=79  Identities=13%  Similarity=0.168  Sum_probs=66.9

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCC---------------CHHHHHHHHHHhcCCCCcccceEEeC-----CCCCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTS---------------NEKAVTAIVSFLLGPERAEKIQIFAG-----DVVPRKK  234 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~---------------~~~~~~~~L~~~~l~~~f~~~~Iv~s-----~~~~~~K  234 (262)
                      ..++||+.++|+.|+++|++++|+||+               ....++.+++.+|+.  |+  .|+.+     ++++..|
T Consensus        41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd--~v~~s~~~~~~~~~~~K  116 (176)
T 2fpr_A           41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FD--EVLICPHLPADECDCRK  116 (176)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EE--EEEEECCCGGGCCSSST
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--ee--EEEEcCCCCcccccccC
Confidence            578999999999999999999999999               578889999999886  87  66543     7889999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     +.+++++|++|++++||
T Consensus       117 P~p~~~-----~~~~~~~gi~~~~~l~V  139 (176)
T 2fpr_A          117 PKVKLV-----ERYLAEQAMDRANSYVI  139 (176)
T ss_dssp             TSCGGG-----GGGC----CCGGGCEEE
T ss_pred             CCHHHH-----HHHHHHcCCCHHHEEEE
Confidence            999999     78899999999999986

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.59  E-value=3.8e-15  Score=121.16  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=69.0

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC---------------HHHHHHHHHHhcCCCCcccceEEe------------C
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQIFA------------G  227 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~---------------~~~~~~~L~~~~l~~~f~~~~Iv~------------s  227 (262)
                      ..++||+.++|+.|+++|++++|+||+.               ...++..++.+|+.  |+  .++.            +
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~--~~~~~~~~~~~~~~~~~  124 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LD--GIYYCPHHPQGSVEEFR  124 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CS--EEEEECCBTTCSSGGGB
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eE--EEEECCcCCCCcccccC
Confidence            5789999999999999999999999999               47888999999886  76  5543            3


Q ss_pred             CCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          228 DVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       228 ~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++++..||+|++|     +.+++++|++|++++||
T Consensus       125 ~~~~~~KP~p~~~-----~~~~~~lgi~~~~~~~V  154 (211)
T 2gmw_A          125 QVCDCRKPHPGML-----LSARDYLHIDMAASYMV  154 (211)
T ss_dssp             SCCSSSTTSCHHH-----HHHHHHHTBCGGGCEEE
T ss_pred             ccCcCCCCCHHHH-----HHHHHHcCCCHHHEEEE
Confidence            4577899999999     88899999999999986

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.57  E-value=3.4e-14  Score=125.32  Aligned_cols=83  Identities=14%  Similarity=0.025  Sum_probs=73.9

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCC-----------CCCCChHHHhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP-----------RKKPDPVKICSL  243 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~-----------~~KPdp~~~~~~  243 (262)
                      ..++||+.++|+.|+++|++++|+||++...++..++++|+.++|+...|+++++++           ..||+|++|   
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~---  290 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSY---  290 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH---
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHH---
Confidence            478999999999999999999999999999999999999999999722478887764           489999999   


Q ss_pred             hhhhhhhhcc--------------cCCcccccC
Q 024806          244 TVDIVCNVLK--------------THAHKNVLV  262 (262)
Q Consensus       244 ~~~~a~~~lg--------------v~p~e~v~I  262 (262)
                        ..+++++|              ++|++|+||
T Consensus       291 --~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~V  321 (384)
T 1qyi_A          291 --IAALYGNNRDKYESYINKQDNIVNKDDVFIV  321 (384)
T ss_dssp             --HHHHHCCCGGGHHHHHHCCTTCSCTTTEEEE
T ss_pred             --HHHHHHcCCccccccccccccCCCCcCeEEE
Confidence              77888898              899999986

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.57  E-value=8.2e-15  Score=131.12  Aligned_cols=77  Identities=19%  Similarity=0.237  Sum_probs=69.1

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCC------------HHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSN------------EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLT  244 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~------------~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~  244 (262)
                      ++||+.++|+.|+++|++++|+||.+            ...+...++.+|+.  |+  .++++++++..||+|++|    
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd--~i~~~~~~~~~KP~p~~~----  159 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQ--VLVATHAGLNRKPVSGMW----  159 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CE--EEEECSSSTTSTTSSHHH----
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EE--EEEECCCCCCCCCCHHHH----
Confidence            78999999999999999999999975            23378889999884  88  899999999999999999    


Q ss_pred             hhhhhhhcc----cCCcccccC
Q 024806          245 VDIVCNVLK----THAHKNVLV  262 (262)
Q Consensus       245 ~~~a~~~lg----v~p~e~v~I  262 (262)
                       ..+++.+|    ++|++|+||
T Consensus       160 -~~a~~~l~~~~~v~~~~~l~V  180 (416)
T 3zvl_A          160 -DHLQEQANEGIPISVEDSVFV  180 (416)
T ss_dssp             -HHHHHHSSTTCCCCGGGCEEE
T ss_pred             -HHHHHHhCCCCCCCHHHeEEE
Confidence             88899997    999999986

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.55  E-value=6.4e-17  Score=133.17  Aligned_cols=163  Identities=16%  Similarity=0.148  Sum_probs=104.9

Q ss_pred             CCCcEEEEecCccccccCcchHHHH--HHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRIS--FNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERK  152 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (262)
                      |++|+|+||+||||+|+... +..+  +.+.+++.|+.......      ..|.....+...+...|+...   ......
T Consensus         1 M~~k~i~fDlDGTLl~~~~~-~~~~~~~~~~l~~~g~~~~~~t~------~~g~~~~~~~~~~~~~g~~~~---~~~~~~   70 (250)
T 2c4n_A            1 MTIKNVICDIDGVLMHDNVA-VPGAAEFLHGIMDKGLPLVLLTN------YPSQTGQDLANRFATAGVDVP---DSVFYT   70 (250)
T ss_dssp             CCCCEEEEECBTTTEETTEE-CTTHHHHHHHHHHTTCCEEEEES------CCSCCHHHHHHHHHHTTCCCC---GGGEEE
T ss_pred             CCccEEEEcCcceEEeCCEe-CcCHHHHHHHHHHcCCcEEEEEC------CCCCCHHHHHHHHHHcCCCCC---HHHeEc
Confidence            46899999999999999876 4445  44556677776431100      024455556666655554311   000000


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEE---------------------------------EEe
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA---------------------------------VCS  199 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~---------------------------------IvT  199 (262)
                      . ....     ..+.+.. .....+++|+.++++.|+++|++++                                 ++|
T Consensus        71 ~-~~~~-----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t  143 (250)
T 2c4n_A           71 S-AMAT-----ADFLRRQ-EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIAT  143 (250)
T ss_dssp             H-HHHH-----HHHHHTS-SCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEES
T ss_pred             H-HHHH-----HHHHHhc-CCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            0 0000     0111111 1224678999999999999999999                                 999


Q ss_pred             CCCHHHHHHHHHHhc-CCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          200 TSNEKAVTAIVSFLL-GPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       200 n~~~~~~~~~L~~~~-l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |.+ ......++.++ +..+|+  .+++.+.+...||+|.+|     +.+++.+|++|+++++|
T Consensus       144 ~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~kpk~~~~-----~~~~~~lgi~~~~~i~i  199 (250)
T 2c4n_A          144 NPD-THGRGFYPACGALCAGIE--KISGRKPFYVGKPSPWII-----RAALNKMQAHSEETVIV  199 (250)
T ss_dssp             CCC-SBSSTTCBCHHHHHHHHH--HHHCCCCEECSTTSTHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             CCC-CCCCCeeecchHHHHHHH--HHhCCCceEeCCCCHHHH-----HHHHHHcCCCcceEEEE
Confidence            987 43444444444 455666  566777788999999999     88999999999999875

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.52  E-value=6.9e-16  Score=129.33  Aligned_cols=79  Identities=11%  Similarity=-0.003  Sum_probs=63.9

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHH--HHH-HHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA--VTA-IVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNV  251 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~--~~~-~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~  251 (262)
                      ..++||+.++|+.|+ +|+++ |+||.+...  ... +++..++..+|+  .++++++++..||+|++|     +.++++
T Consensus       125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~KP~p~~~-----~~~~~~  195 (264)
T 1yv9_A          125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVE--TATQTKPVYIGKPKAIIM-----ERAIAH  195 (264)
T ss_dssp             TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHH--HHHTCCCEECSTTSHHHH-----HHHHHH
T ss_pred             CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHH--HHhCCCccccCCCCHHHH-----HHHHHH
Confidence            457899999999997 89998 999997532  111 223334667888  788888888999999999     889999


Q ss_pred             cccCCcccccC
Q 024806          252 LKTHAHKNVLV  262 (262)
Q Consensus       252 lgv~p~e~v~I  262 (262)
                      +|++|++++||
T Consensus       196 ~~~~~~~~~~v  206 (264)
T 1yv9_A          196 LGVEKEQVIMV  206 (264)
T ss_dssp             HCSCGGGEEEE
T ss_pred             cCCCHHHEEEE
Confidence            99999999986

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.51  E-value=3.1e-16  Score=130.57  Aligned_cols=79  Identities=8%  Similarity=-0.071  Sum_probs=65.8

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccc-eEEeCCCCCCCCCChHHHhhhhhhhhhhhcccC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-QIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTH  255 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~-~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~  255 (262)
                      ++||+.++++.|+ +|+++ ++||.+.......+..+++.++|+.. .++++++++..||+|++|     +.+++++|++
T Consensus       123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~-----~~~~~~lgi~  195 (259)
T 2ho4_A          123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFF-----LEALRDADCA  195 (259)
T ss_dssp             BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHH-----HHHGGGGTCC
T ss_pred             CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHH-----HHHHHHcCCC
Confidence            6899999999999 89999 99999866665666667777777511 356778888999999999     8899999999


Q ss_pred             CcccccC
Q 024806          256 AHKNVLV  262 (262)
Q Consensus       256 p~e~v~I  262 (262)
                      |++|++|
T Consensus       196 ~~~~~~i  202 (259)
T 2ho4_A          196 PEEAVMI  202 (259)
T ss_dssp             GGGEEEE
T ss_pred             hHHEEEE
Confidence            9999986

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.51  E-value=2.4e-15  Score=122.50  Aligned_cols=74  Identities=8%  Similarity=0.063  Sum_probs=57.9

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeC-C--CCCCCCCChHHHhhhhhhhhhhhc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG-D--VVPRKKPDPVKICSLTVDIVCNVL  252 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s-~--~~~~~KPdp~~~~~~~~~~a~~~l  252 (262)
                      .++||+.++|+.|+++|++++|+||++...++..++.  +.++|+  .++.+ +  +++..||+|++|     ..+++++
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~--~i~~~~~~~~~~~~KP~p~~~-----~~~~~~~  158 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFH--IPATNMNPVIFAGDKPGQNTK-----SQWLQDK  158 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTT--CCTTTBCCCEECCCCTTCCCS-----HHHHHHT
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcC--ccccccchhhhcCCCCCHHHH-----HHHHHHC
Confidence            4578999999999999999999999987766666666  456777  44332 2  356789999999     7788888


Q ss_pred             ccCCcccccC
Q 024806          253 KTHAHKNVLV  262 (262)
Q Consensus       253 gv~p~e~v~I  262 (262)
                      |+    |+||
T Consensus       159 g~----~l~V  164 (211)
T 2b82_A          159 NI----RIFY  164 (211)
T ss_dssp             TE----EEEE
T ss_pred             CC----EEEE
Confidence            87    6664

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.49  E-value=4.8e-14  Score=112.30  Aligned_cols=76  Identities=9%  Similarity=0.026  Sum_probs=67.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC-HHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN-EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~-~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ..++||+.++|+.|+++|++++|+||++ ...++..++.+|+.++|+  .++...     +|+|++|     +.+++++|
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~--~~~~~~-----~~k~~~~-----~~~~~~~~  134 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV--HREIYP-----GSKITHF-----ERLQQKTG  134 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE--EEEESS-----SCHHHHH-----HHHHHHHC
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc--eeEEEe-----CchHHHH-----HHHHHHcC
Confidence            5789999999999999999999999999 799999999999999998  554432     5788999     78899999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|++|+||
T Consensus       135 ~~~~~~~~i  143 (187)
T 2wm8_A          135 IPFSQMIFF  143 (187)
T ss_dssp             CCGGGEEEE
T ss_pred             CChHHEEEE
Confidence            999999986

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.49  E-value=3.6e-14  Score=113.80  Aligned_cols=81  Identities=19%  Similarity=0.135  Sum_probs=64.1

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeC-C---------CCCCCCCChHHHhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG-D---------VVPRKKPDPVKICSLT  244 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s-~---------~~~~~KPdp~~~~~~~  244 (262)
                      ..+.||+.++|+.|+++|++++|+||.....++..++.+++..+|+  .++.. +         +....+++|..+    
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~K~~~l----  148 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA--NRLIVKDGKLTGDVEGEVLKENAKGEIL----  148 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEETTEEEEEEECSSCSTTHHHHHH----
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEE--eeeEEECCEEcCCcccCccCCccHHHHH----
Confidence            5678999999999999999999999998888888999998877776  32211 1         112234567777    


Q ss_pred             hhhhhhhcccCCcccccC
Q 024806          245 VDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       245 ~~~a~~~lgv~p~e~v~I  262 (262)
                       ..+++.+|+.|++|++|
T Consensus       149 -~~~~~~lgi~~~~~~~i  165 (211)
T 1l7m_A          149 -EKIAKIEGINLEDTVAV  165 (211)
T ss_dssp             -HHHHHHHTCCGGGEEEE
T ss_pred             -HHHHHHcCCCHHHEEEE
Confidence             77899999999999875

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.48  E-value=3.5e-14  Score=123.42  Aligned_cols=83  Identities=18%  Similarity=0.112  Sum_probs=71.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccce-----EE---eCCCCCCCCCChHHHhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-----IF---AGDVVPRKKPDPVKICSLTVD  246 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~-----Iv---~s~~~~~~KPdp~~~~~~~~~  246 (262)
                      .+++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|+...     .+   .++++...||+|++|     +
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~-----~  251 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADIL-----L  251 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHH-----H
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHH-----H
Confidence            6899999999999999999999999999999999999999998887321     11   123567789999999     8


Q ss_pred             hhhhhcccCCcccccC
Q 024806          247 IVCNVLKTHAHKNVLV  262 (262)
Q Consensus       247 ~a~~~lgv~p~e~v~I  262 (262)
                      .+++++|++|+++++|
T Consensus       252 ~~~~~lgi~~~~~v~v  267 (335)
T 3n28_A          252 TLAQQYDVEIHNTVAV  267 (335)
T ss_dssp             HHHHHHTCCGGGEEEE
T ss_pred             HHHHHcCCChhhEEEE
Confidence            8899999999999885

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.45  E-value=2.4e-13  Score=110.83  Aligned_cols=79  Identities=19%  Similarity=0.229  Sum_probs=68.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH---------------HHHHHHHHHhcCCCCcccceE-EeC-----------
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQI-FAG-----------  227 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---------------~~~~~~L~~~~l~~~f~~~~I-v~s-----------  227 (262)
                      ..++||+.++|+.|+++|++++|+||++.               ..+...++.+|+.  |+  .+ ++.           
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~--~~~~~~~~~~g~~~~~~  130 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VD--MVLACAYHEAGVGPLAI  130 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CS--EEEEECCCTTCCSTTCC
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--ee--eEEEeecCCCCceeecc
Confidence            56889999999999999999999999997               6888999999874  55  33 333           


Q ss_pred             CCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          228 DVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       228 ~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++++..||+|.+|     +.+++++|++|++++||
T Consensus       131 ~~~~~~KP~~~~~-----~~~~~~~~i~~~~~~~V  160 (218)
T 2o2x_A          131 PDHPMRKPNPGML-----VEAGKRLALDLQRSLIV  160 (218)
T ss_dssp             SSCTTSTTSCHHH-----HHHHHHHTCCGGGCEEE
T ss_pred             cCCccCCCCHHHH-----HHHHHHcCCCHHHEEEE
Confidence            6678899999999     88899999999999986

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.43  E-value=7.4e-15  Score=114.42  Aligned_cols=63  Identities=16%  Similarity=0.077  Sum_probs=57.9

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|+.|+++|++++|+||.+...++..++.+|+.++|+  .         .||+|++|     +.+++.+|++|++++||
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~--~---------~kpk~~~~-----~~~~~~~~~~~~~~~~v  101 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQ--G---------VVDKLSAA-----EELCNELGINLEQVAYI  101 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEEC--S---------CSCHHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeec--c---------cCChHHHH-----HHHHHHcCCCHHHEEEE
Confidence            7899999999999999999999999999999988887  3         29999999     88899999999999986

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.43  E-value=2.5e-14  Score=111.15  Aligned_cols=69  Identities=10%  Similarity=-0.063  Sum_probs=59.9

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCc
Q 024806          178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAH  257 (262)
Q Consensus       178 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~  257 (262)
                      .|+..++|+.|+++|++++|+||++...++..++.+|+..+|+  .         .||+|++|     +.+++.+|++|+
T Consensus        38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~--~---------~kp~~~~~-----~~~~~~~~~~~~  101 (162)
T 2p9j_A           38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYT--G---------SYKKLEIY-----EKIKEKYSLKDE  101 (162)
T ss_dssp             EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEE--C---------C--CHHHH-----HHHHHHTTCCGG
T ss_pred             cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhcc--C---------CCCCHHHH-----HHHHHHcCCCHH
Confidence            3556799999999999999999999999999999999887776  2         69999999     888999999999


Q ss_pred             ccccC
Q 024806          258 KNVLV  262 (262)
Q Consensus       258 e~v~I  262 (262)
                      +++||
T Consensus       102 ~~~~v  106 (162)
T 2p9j_A          102 EIGFI  106 (162)
T ss_dssp             GEEEE
T ss_pred             HEEEE
Confidence            99886

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.41  E-value=5.8e-15  Score=120.21  Aligned_cols=63  Identities=11%  Similarity=0.041  Sum_probs=57.8

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|+.|+++|++++|+||.....++.+++.+|+.++|+  .+         ||+|+++     +.+++.+|++|+++++|
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~--~~---------k~K~~~l-----~~~~~~lg~~~~~~~~v  146 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQ--GQ---------SDKLVAY-----HELLATLQCQPEQVAYI  146 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEEC--SC---------SSHHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhc--cc---------CChHHHH-----HHHHHHcCcCcceEEEE
Confidence            8999999999999999999999999999999988887  33         8889999     88899999999999986

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.40  E-value=7.4e-14  Score=118.80  Aligned_cols=69  Identities=16%  Similarity=0.153  Sum_probs=58.5

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+++|++++|+||.+...++.+++.+|+.++|+  .++         |.+  .     ..+++.+++
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~i~---------~~~--K-----~~~~~~l~~  223 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA--EVL---------PHQ--K-----SEEVKKLQA  223 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC--SCC---------TTC--H-----HHHHHHHTT
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeee--ecC---------hHH--H-----HHHHHHHhc
Confidence            5789999999999999999999999999999999999999999998  443         222  2     346888998


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      . ++|+||
T Consensus       224 ~-~~~~~v  230 (287)
T 3a1c_A          224 K-EVVAFV  230 (287)
T ss_dssp             T-CCEEEE
T ss_pred             C-CeEEEE
Confidence            8 888875

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.39  E-value=1.5e-14  Score=114.39  Aligned_cols=62  Identities=16%  Similarity=0.140  Sum_probs=55.8

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|+.|+++|++++|+||.....++.+++.+|+. +|.  .         .||+|+.+     +.+++.+|++|+++++|
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~--~---------~~~k~~~l-----~~~~~~~~~~~~~~~~v  108 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLH--G---------IDRKDLAL-----KQWCEEQGIAPERVLYV  108 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEE--S---------CSCHHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEe--C---------CCChHHHH-----HHHHHHcCCCHHHEEEE
Confidence            899999999999999999999999999999987 664  2         28999999     88899999999999885

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.38  E-value=1.1e-14  Score=116.47  Aligned_cols=63  Identities=16%  Similarity=0.046  Sum_probs=56.8

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|+.|+++|++++|+||.....++.+++.+|+.++|+  .+         +|+|+++     +.+++.+|++|++++||
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~--~~---------~~K~~~~-----~~~~~~~g~~~~~~~~v  116 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQ--GR---------EDKLVVL-----DKLLAELQLGYEQVAYL  116 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEEC--SC---------SCHHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhc--Cc---------CChHHHH-----HHHHHHcCCChhHEEEE
Confidence            8899999999999999999999999999999999997  33         5666888     78899999999999986

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.38  E-value=1.4e-13  Score=109.55  Aligned_cols=78  Identities=17%  Similarity=0.079  Sum_probs=60.0

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCC-CCCCCChHHHhhhhhhhhhhhcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV-PRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~-~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ..++||+.++|+.|+++|++++|+||+....++.. +.+|+.++|+  .+...++. ...+|.+...     ..+++.+ 
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k-----~~~l~~l-  148 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMAN--RAIFEDGKFQGIRLRFRDK-----GEFLKRF-  148 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEE--EEEEETTEEEEEECCSSCH-----HHHHGGG-
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhhee--eEEeeCCceECCcCCccCH-----HHHHHhc-
Confidence            68999999999999999999999999998888888 8898888865  45444432 2245555544     4556666 


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                       +|+++++|
T Consensus       149 -~~~~~i~i  156 (201)
T 4ap9_A          149 -RDGFILAM  156 (201)
T ss_dssp             -TTSCEEEE
T ss_pred             -CcCcEEEE
Confidence             78998875

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.35  E-value=5.4e-14  Score=118.05  Aligned_cols=78  Identities=12%  Similarity=0.082  Sum_probs=61.6

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHHhcCCCCcccceEEeCCC-CCCCCCChHHHhhhhhhhhhhh
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA---IVSFLLGPERAEKIQIFAGDV-VPRKKPDPVKICSLTVDIVCNV  251 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~---~L~~~~l~~~f~~~~Iv~s~~-~~~~KPdp~~~~~~~~~~a~~~  251 (262)
                      .+++++.++++.| +.|+++ ++||........   .++..++..+|+  .++++++ ++..||+|.+|     +.+++.
T Consensus       137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~kpk~~~~-----~~~~~~  207 (271)
T 1vjr_A          137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIE--ASTGRKPDLIAGKPNPLVV-----DVISEK  207 (271)
T ss_dssp             CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHH--HHHSCCCSEECSTTSTHHH-----HHHHHH
T ss_pred             cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHH--HHhCCCCcccCCCCCHHHH-----HHHHHH
Confidence            4678999999999 789998 999986432221   233334566787  6777787 88999999999     889999


Q ss_pred             cccCCcccccC
Q 024806          252 LKTHAHKNVLV  262 (262)
Q Consensus       252 lgv~p~e~v~I  262 (262)
                      +|++|+++++|
T Consensus       208 lgi~~~e~i~i  218 (271)
T 1vjr_A          208 FGVPKERMAMV  218 (271)
T ss_dssp             HTCCGGGEEEE
T ss_pred             hCCCCceEEEE
Confidence            99999999986

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.35  E-value=1.2e-12  Score=103.31  Aligned_cols=118  Identities=14%  Similarity=0.132  Sum_probs=69.9

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      ||+|+||||+||||+|+... +..++.+   .+|...+  .+.+     .+.+....   +.         ...   ++ 
T Consensus         2 Mm~~~viFD~DGtL~Ds~~~-~~~~~~~---~~g~~~~--~~~~-----~g~~~~~~---~~---------~~~---~~-   54 (180)
T 3bwv_A            2 MTRQRIAIDMDEVLADTLGA-VVKAVNE---RADLNIK--MESL-----NGKKLKHM---IP---------EHE---GL-   54 (180)
T ss_dssp             -CCCEEEEETBTTTBCHHHH-HHHHHHH---HSCCCCC--GGGC-----TTCCC-----------------------CH-
T ss_pred             CcccEEEEeCCCcccccHHH-HHHHHHH---HhCCCCC--HHHH-----cCccHHHH---CC---------chH---HH-
Confidence            35699999999999999996 6667765   5565533  2222     12221111   10         000   01 


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCC---CH--HHHHHHHHH-hcCCCCcccceEEeCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTS---NE--KAVTAIVSF-LLGPERAEKIQIFAGD  228 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~---~~--~~~~~~L~~-~~l~~~f~~~~Iv~s~  228 (262)
                         +.+..   +.... ....+++||+.++|+.|+++ ++++|+||+   ..  ......++. +++..+|+  .|++++
T Consensus        55 ---~~~~~---~~~~~-~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~--~i~~~~  124 (180)
T 3bwv_A           55 ---VMDIL---KEPGF-FRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQH--FVFCGR  124 (180)
T ss_dssp             ---HHHHH---HSTTG-GGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGG--EEECSC
T ss_pred             ---HHHHH---hCcch-hccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCccc--EEEeCC
Confidence               11110   11111 12478999999999999985 999999999   32  222444555 56777787  788877


Q ss_pred             C
Q 024806          229 V  229 (262)
Q Consensus       229 ~  229 (262)
                      +
T Consensus       125 ~  125 (180)
T 3bwv_A          125 K  125 (180)
T ss_dssp             G
T ss_pred             c
Confidence            6

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.31  E-value=4e-13  Score=107.97  Aligned_cols=63  Identities=10%  Similarity=0.084  Sum_probs=56.9

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .|+.|+++|++++|+||.....++.+++.+|+.++|+  .+         ||+|..+     +.+++.+|++|+++++|
T Consensus        60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~--~~---------k~k~~~~-----~~~~~~~~~~~~~~~~v  122 (195)
T 3n07_A           60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQ--GQ---------DDKVQAY-----YDICQKLAIAPEQTGYI  122 (195)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEEC--SC---------SSHHHHH-----HHHHHHHCCCGGGEEEE
T ss_pred             HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEee--CC---------CCcHHHH-----HHHHHHhCCCHHHEEEE
Confidence            4788999999999999999999999999999988886  22         8999999     88899999999999885

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.31  E-value=8e-13  Score=110.94  Aligned_cols=63  Identities=14%  Similarity=0.127  Sum_probs=57.7

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHH
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKI  240 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~  240 (262)
                      .++||+.++|+.|+++|++++|+||.....++.+++.+|+.++|+  .+++++.....||.|+.|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~--~~~~~~k~~~~k~~~~~~  206 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFA--EVLPHEKAEKVKEVQQKY  206 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC--SCCGGGHHHHHHHHHTTS
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhH--hcCHHHHHHHHHHHHhcC
Confidence            688999999999999999999999999999999999999999999  788887777778888776

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.30  E-value=3.2e-14  Score=120.59  Aligned_cols=75  Identities=12%  Similarity=0.182  Sum_probs=63.4

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCCHHHH--H--HHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhc---
Q 024806          180 GVAKLIDQALEKGVKVAVCSTSNEKAV--T--AIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVL---  252 (262)
Q Consensus       180 gv~e~L~~L~~~G~~l~IvTn~~~~~~--~--~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~l---  252 (262)
                      ...++++.|+++|++ +|+||.+....  .  .+++..++.++|+  .++++++++..||+|++|     +.+++++   
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~KP~p~~~-----~~a~~~l~~~  220 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIE--SILGRRFIRFGKPDSQMF-----MFAYDMLRQK  220 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHH--HHHCSCEEEESTTSSHHH-----HHHHHHHHTT
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHH--HHhCCceeEecCCCHHHH-----HHHHHHHhhc
Confidence            666777799999999 99999986655  3  2245667888999  789999999999999999     8899999   


Q ss_pred             -ccCCcccccC
Q 024806          253 -KTHAHKNVLV  262 (262)
Q Consensus       253 -gv~p~e~v~I  262 (262)
                       |++|++++||
T Consensus       221 ~~~~~~~~~~V  231 (284)
T 2hx1_A          221 MEISKREILMV  231 (284)
T ss_dssp             SCCCGGGEEEE
T ss_pred             cCCCcceEEEE
Confidence             9999999986

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.28  E-value=1.4e-12  Score=104.40  Aligned_cols=63  Identities=11%  Similarity=0.061  Sum_probs=57.5

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .|+.|+++|++++|+||.+...++..++.+|+..+|+  .+         ||+|++|     +.+++.+|++|++++||
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~--~~---------kpk~~~~-----~~~~~~~~~~~~~~~~v  116 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYK--GQ---------VDKRSAY-----QHLKKTLGLNDDEFAYI  116 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEEC--SC---------SSCHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcccee--CC---------CChHHHH-----HHHHHHhCCCHHHEEEE
Confidence            4788999999999999999999999999999988887  33         9999999     88899999999999886

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.27  E-value=1e-12  Score=111.48  Aligned_cols=80  Identities=13%  Similarity=0.104  Sum_probs=66.9

Q ss_pred             CCCccHHHHHHHHHHC-CCeEEEEeCC---------------------CHHHHHHHHHHhcCCCCcccceE---------
Q 024806          176 PLRPGVAKLIDQALEK-GVKVAVCSTS---------------------NEKAVTAIVSFLLGPERAEKIQI---------  224 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~-G~~l~IvTn~---------------------~~~~~~~~L~~~~l~~~f~~~~I---------  224 (262)
                      ..++++.++++.|+++ |+++++.|+.                     ....+...++.+|+..+|.  .+         
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~~~~~~~~~~  199 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNIN--RCNPLAGDPED  199 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEE--ECCGGGTCCTT
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEE--EccccccCCCC
Confidence            5678999999999998 9999999987                     5677788888888877776  33         


Q ss_pred             -EeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          225 -FAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       225 -v~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                       ++.+..+..||++..+     +.+++.+|++|+++++|
T Consensus       200 ~~~~~~~~~~~~k~~~~-----~~~~~~~~~~~~~~~~~  233 (289)
T 3gyg_A          200 SYDVDFIPIGTGKNEIV-----TFMLEKYNLNTERAIAF  233 (289)
T ss_dssp             EEEEEEEESCCSHHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             ceEEEEEeCCCCHHHHH-----HHHHHHcCCChhhEEEE
Confidence             4556667889999998     88899999999999875

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.27  E-value=1.1e-12  Score=103.85  Aligned_cols=68  Identities=12%  Similarity=-0.061  Sum_probs=59.6

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcc
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHK  258 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e  258 (262)
                      ++..++|+.|+++|++++|+||.+...++..++.+|+..+|+  .         .||+|.+|     +.+++.+|++|++
T Consensus        38 ~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~--~---------~k~k~~~~-----~~~~~~~~~~~~~  101 (180)
T 1k1e_A           38 VRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFL--G---------KLEKETAC-----FDLMKQAGVTAEQ  101 (180)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEE--S---------CSCHHHHH-----HHHHHHHTCCGGG
T ss_pred             cchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeec--C---------CCCcHHHH-----HHHHHHcCCCHHH
Confidence            334478999999999999999999999999999999887775  2         48999999     7889999999999


Q ss_pred             cccC
Q 024806          259 NVLV  262 (262)
Q Consensus       259 ~v~I  262 (262)
                      +++|
T Consensus       102 ~~~v  105 (180)
T 1k1e_A          102 TAYI  105 (180)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9885

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.87  E-value=8.5e-13  Score=110.91  Aligned_cols=70  Identities=19%  Similarity=0.245  Sum_probs=61.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+++|++++++||.+...++.+++.+|+.++|+  .++           |+.+     ..+++.+++
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~--~~~-----------p~~k-----~~~~~~l~~  196 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYS--NLS-----------PEDK-----VRIIEKLKQ  196 (263)
Confidence            5689999999999999999999999999999999999999999998  444           3445     567889999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|++++||
T Consensus       197 ~~~~~~~V  204 (263)
T 2yj3_A          197 NGNKVLMI  204 (263)
Confidence            99999986

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.23  E-value=3.6e-13  Score=115.45  Aligned_cols=80  Identities=8%  Similarity=0.013  Sum_probs=65.3

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHH--H-HHHHHhc-CCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAV--T-AIVSFLL-GPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCN  250 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~--~-~~L~~~~-l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~  250 (262)
                      ..++|++.++++.|+++|+ ++|+||.+....  . ..+..+| +..+|+  .++++++++..||+|.+|     +.+++
T Consensus       155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~--~~~~~~~~~~~KP~~~~~-----~~~~~  226 (306)
T 2oyc_A          155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVE--TASGRQALVVGKPSPYMF-----ECITE  226 (306)
T ss_dssp             TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHH--HHHTCCCEECSTTSTHHH-----HHHHH
T ss_pred             CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHH--HHhCCCceeeCCCCHHHH-----HHHHH
Confidence            3568999999999999999 999999985543  1 2333444 567788  778888889999999999     88999


Q ss_pred             hcccCCcccccC
Q 024806          251 VLKTHAHKNVLV  262 (262)
Q Consensus       251 ~lgv~p~e~v~I  262 (262)
                      .+|++|+++++|
T Consensus       227 ~lgi~~~e~l~v  238 (306)
T 2oyc_A          227 NFSIDPARTLMV  238 (306)
T ss_dssp             HSCCCGGGEEEE
T ss_pred             HcCCChHHEEEE
Confidence            999999999986

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.22  E-value=7e-13  Score=110.45  Aligned_cols=79  Identities=10%  Similarity=0.037  Sum_probs=49.2

Q ss_pred             CccHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHhcCCCCcccc-eEEeCCCCCCCCCChHHHhhhhhhhhhhhcccC
Q 024806          178 RPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-QIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTH  255 (262)
Q Consensus       178 ~pgv~e~L~~L~~~-G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~-~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~  255 (262)
                      ++++.++++.|++. |+++ +++|.........+...++..+|+.. .+++.+.++..||+|.+|     +.+++.+|++
T Consensus       133 ~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~-----~~~~~~lgi~  206 (271)
T 2x4d_A          133 YQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFF-----KSALQAIGVE  206 (271)
T ss_dssp             HHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHH-----HHHHHHHTCC
T ss_pred             HHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHH-----HHHHHHhCCC
Confidence            45666777777766 7777 66665432222111122222232200 234455677899999999     8899999999


Q ss_pred             CcccccC
Q 024806          256 AHKNVLV  262 (262)
Q Consensus       256 p~e~v~I  262 (262)
                      |+++++|
T Consensus       207 ~~~~i~i  213 (271)
T 2x4d_A          207 AHQAVMI  213 (271)
T ss_dssp             GGGEEEE
T ss_pred             cceEEEE
Confidence            9999875

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.19  E-value=6.6e-13  Score=111.28  Aligned_cols=77  Identities=8%  Similarity=-0.078  Sum_probs=61.6

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHH--HHHHHH-hcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAV--TAIVSF-LLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNV  251 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~--~~~L~~-~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~  251 (262)
                      ..++||+.++++.|+ +|+++ |+||.+....  ...+.. .++..+|+  .++++++++..||+|++|     +.++++
T Consensus       129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~--~~~~~~~~~~~KP~~~~~-----~~~~~~  199 (263)
T 1zjj_A          129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALK--VATNVEPIIIGKPNEPMY-----EVVREM  199 (263)
T ss_dssp             TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHH--HHHCCCCEECSTTSHHHH-----HHHHHH
T ss_pred             CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHH--HHhCCCccEecCCCHHHH-----HHHHHh
Confidence            457899999999999 89999 9999986443  222332 45667888  788888888999999999     777777


Q ss_pred             cccCCcccccC
Q 024806          252 LKTHAHKNVLV  262 (262)
Q Consensus       252 lgv~p~e~v~I  262 (262)
                        ++|++++||
T Consensus       200 --~~~~~~~~V  208 (263)
T 1zjj_A          200 --FPGEELWMV  208 (263)
T ss_dssp             --STTCEEEEE
T ss_pred             --CCcccEEEE
Confidence              889999986

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.19  E-value=1.6e-11  Score=97.86  Aligned_cols=63  Identities=16%  Similarity=0.075  Sum_probs=56.9

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +|+.|+++|++++|+||.+...++..++.+|+..+|+  .         .||+|++|     +.+++++|++|++++||
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~--~---------~kpk~~~~-----~~~~~~~g~~~~~~~~i  123 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQ--G---------QSNKLIAF-----SDLLEKLAIAPENVAYV  123 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEEC--S---------CSCSHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeec--C---------CCCCHHHH-----HHHHHHcCCCHHHEEEE
Confidence            8889999999999999999999999999999887775  2         49999999     88899999999999886

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.16  E-value=4.3e-11  Score=100.16  Aligned_cols=60  Identities=15%  Similarity=0.158  Sum_probs=49.7

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhcCC--CCcccceEEeCCCCCCCCCCh
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGP--ERAEKIQIFAGDVVPRKKPDP  237 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~L~~~~l~--~~f~~~~Iv~s~~~~~~KPdp  237 (262)
                      ..+++||+.++|+.|+++|++++|+||.+   ...+...|+.+|+.  .+|+  .++++++.  .||.+
T Consensus        99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~--vi~~~~~~--~K~~~  163 (258)
T 2i33_A           99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEH--ILLQDPKE--KGKEK  163 (258)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTT--EEEECTTC--CSSHH
T ss_pred             CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCce--EEECCCCC--CCcHH
Confidence            36789999999999999999999999998   66778888999998  7777  66776653  56665

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=98.97  E-value=8.3e-11  Score=98.41  Aligned_cols=77  Identities=13%  Similarity=0.047  Sum_probs=49.6

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHH---HHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVT---AIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~---~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      .++++.+.+..+ +.|.++ ++||.+.....   ......++..+|+  .++..+..+..||+|.+|     +.+++++|
T Consensus       126 ~~~~~~~~~~~l-~~~~~~-i~~n~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Kp~~~~~-----~~~~~~~~  196 (264)
T 3epr_A          126 TYDKLATATLAI-QNGALF-IGTNPDLNIPTERGLLPGAGSLNALLE--AATRIKPVFIGKPNAIIM-----NKALEILN  196 (264)
T ss_dssp             CHHHHHHHHHHH-HTTCEE-EESCCCSEEEETTEEEECHHHHHHHHH--HHHSCCCEECSTTSHHHH-----HHHHHHHT
T ss_pred             CHHHHHHHHHHH-HCCCeE-EEEcCCccccCCCceecCccHHHHHHH--HHhCCCcccCCCCCHHHH-----HHHHHHhC
Confidence            345666666666 345544 66776421100   0001112334566  567778888999999999     88999999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|+++++|
T Consensus       197 ~~~~~~~~v  205 (264)
T 3epr_A          197 IPRNQAVMV  205 (264)
T ss_dssp             SCGGGEEEE
T ss_pred             cCcccEEEE
Confidence            999999986

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.89  E-value=3.3e-09  Score=86.98  Aligned_cols=58  Identities=16%  Similarity=0.087  Sum_probs=43.3

Q ss_pred             EEEEe-CCCHHHHHHHHHHhcCCCCcccceEEeCC----CCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          195 VAVCS-TSNEKAVTAIVSFLLGPERAEKIQIFAGD----VVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       195 l~IvT-n~~~~~~~~~L~~~~l~~~f~~~~Iv~s~----~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +++++ +.....++.+++.++  ++|+  .+ ++.    .....||++..+     +.+++.+|++|+++++|
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~--~~~~--~~-~~~~~~ei~~~~~~K~~~~-----~~~~~~~~~~~~~~~~i  175 (231)
T 1wr8_A          113 LVIMRETINVETVREIINELN--LNLV--AV-DSGFAIHVKKPWINKGSGI-----EKASEFLGIKPKEVAHV  175 (231)
T ss_dssp             EEECTTTSCHHHHHHHHHHTT--CSCE--EE-ECSSCEEEECTTCCHHHHH-----HHHHHHHTSCGGGEEEE
T ss_pred             EEEECCCCCHHHHHHHHHhcC--CcEE--EE-ecCcEEEEecCCCChHHHH-----HHHHHHcCCCHHHEEEE
Confidence            36776 557778888888764  5676  44 432    345789999999     88899999999999875

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.88  E-value=6.1e-09  Score=86.91  Aligned_cols=28  Identities=25%  Similarity=0.271  Sum_probs=25.3

Q ss_pred             CCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          230 VPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       230 ~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ....||+|.+|     +.+++.+|++|+++++|
T Consensus       183 ~~~~kp~~~~~-----~~~~~~~~~~~~~~~~v  210 (268)
T 3qgm_A          183 VVVGKPSEVIM-----REALDILGLDAKDVAVV  210 (268)
T ss_dssp             EECSTTSHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             eecCCCCHHHH-----HHHHHHhCCCchhEEEE
Confidence            56789999999     88999999999999986

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.83  E-value=3.3e-10  Score=94.66  Aligned_cols=77  Identities=13%  Similarity=-0.007  Sum_probs=51.0

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHH---HHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVT---AIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~---~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      .++++.+.+..++. |. ..++||.+.....   ......++..+|+  .++..+..+..||+|.+|     +.+++.+|
T Consensus       127 ~~~~~~~~~~~l~~-~~-~~i~~n~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~kp~~~~~-----~~~~~~lg  197 (266)
T 3pdw_A          127 TYEKFAVGCLAIRN-GA-RFISTNGDIAIPTERGLLPGNGSLTSVLT--VSTGVQPVFIGKPESIIM-----EQAMRVLG  197 (266)
T ss_dssp             CHHHHHHHHHHHHT-TC-EEEESCCCCEEEETTEEEECHHHHHHHHH--HHHCCCCEECSTTSSHHH-----HHHHHHHT
T ss_pred             CHHHHHHHHHHHHC-CC-eEEEEcCCceeECCCceEecchHHHHHHH--HHhCCCccccCCCCHHHH-----HHHHHHcC
Confidence            45667777777764 44 4566776532110   0011112334566  566777788999999999     88999999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|+++++|
T Consensus       198 i~~~~~~~i  206 (266)
T 3pdw_A          198 TDVSETLMV  206 (266)
T ss_dssp             CCGGGEEEE
T ss_pred             CChhhEEEE
Confidence            999999986

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.75  E-value=3.4e-09  Score=82.82  Aligned_cols=60  Identities=12%  Similarity=0.002  Sum_probs=48.6

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHH--HhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCccccc
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVS--FLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVL  261 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~--~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~  261 (262)
                      .|+.|+++|++++|+||.  ..++..++  .+++. +|.      +     .+++|+.+     +.+++.+|++|++++|
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~~~------g-----~~~K~~~l-----~~~~~~~gi~~~~~~~  104 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-TEV------S-----VSDKLATV-----DEWRKEMGLCWKEVAY  104 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-EEC------S-----CSCHHHHH-----HHHHHHTTCCGGGEEE
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-EEE------C-----CCChHHHH-----HHHHHHcCcChHHEEE
Confidence            688999999999999999  67888898  55554 332      1     25778888     8889999999999988


Q ss_pred             C
Q 024806          262 V  262 (262)
Q Consensus       262 I  262 (262)
                      |
T Consensus       105 v  105 (168)
T 3ewi_A          105 L  105 (168)
T ss_dssp             E
T ss_pred             E
Confidence            5

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.73  E-value=3.7e-08  Score=82.59  Aligned_cols=74  Identities=7%  Similarity=0.094  Sum_probs=44.3

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc--CCCCcccceEEeCC----CCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL--GPERAEKIQIFAGD----VVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       180 gv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~--l~~~f~~~~Iv~s~----~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ++.++.+.++...+++.++++  ......+.+.+.  +.+.+.  .+.++.    .....++++..+     +.+++.+|
T Consensus       140 ~~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~l~~~~~~~~~--~~~s~~~~~ei~~~~~~K~~~l-----~~l~~~lg  210 (279)
T 4dw8_A          140 ETNDFLTDITLPVAKCLIVGD--AGKLIPVESELCIRLQGKIN--VFRSEPYFLELVPQGIDKALSL-----SVLLENIG  210 (279)
T ss_dssp             ECSCHHHHSCSCCSCEEEESC--HHHHHHHHHHHHHHTTTTCE--EEEEETTEEEEECTTCCHHHHH-----HHHHHHHT
T ss_pred             cHHHHHHhhcCCceEEEEeCC--HHHHHHHHHHHHHHhcCCEE--EEEcCCcEEEEecCCCChHHHH-----HHHHHHcC
Confidence            444445555555666666543  234444444432  334555  444442    334566778888     88899999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|+++++|
T Consensus       211 i~~~~~i~~  219 (279)
T 4dw8_A          211 MTREEVIAI  219 (279)
T ss_dssp             CCGGGEEEE
T ss_pred             CCHHHEEEE
Confidence            999999875

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.72  E-value=1.1e-08  Score=87.14  Aligned_cols=78  Identities=12%  Similarity=-0.009  Sum_probs=62.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHH--------hcCCCCcccceEEeCCCCCCCCCChHHHhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSF--------LLGPERAEKIQIFAGDVVPRKKPDPVKICSL  243 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~---~~~~L~~--------~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~  243 (262)
                      ..++||+.++|+.|+++|++++|+||.+...   +...|+.        +|+  +|+  .++++++. ..||+|+++   
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~--~~~~~~~~-~~kp~p~~~---  258 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLV--MQCQREQG-DTRKDDVVK---  258 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCS--EEEECCTT-CCSCHHHHH---
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--Cch--heeeccCC-CCcHHHHHH---
Confidence            4569999999999999999999999998543   4667777        777  577  78887764 569999999   


Q ss_pred             hhhhhhhhcccCCcc-cccC
Q 024806          244 TVDIVCNVLKTHAHK-NVLV  262 (262)
Q Consensus       244 ~~~~a~~~lgv~p~e-~v~I  262 (262)
                        ..+++.++..+.+ |+||
T Consensus       259 --~~~~~~~~~~~~~~~~~v  276 (301)
T 1ltq_A          259 --EEIFWKHIAPHFDVKLAI  276 (301)
T ss_dssp             --HHHHHHHTTTTCEEEEEE
T ss_pred             --HHHHHHHhccccceEEEe
Confidence              6778888877655 5664

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.70  E-value=5.3e-08  Score=80.97  Aligned_cols=47  Identities=11%  Similarity=0.032  Sum_probs=42.1

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCH----HHHHHHHHHhcCCCCcc
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNE----KAVTAIVSFLLGPERAE  220 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~----~~~~~~L~~~~l~~~f~  220 (262)
                      ..+++||+.++|+.|+++|++++|+||.+.    ..+...|+.+|+..+++
T Consensus        99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~  149 (260)
T 3pct_A           99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND  149 (260)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc
Confidence            368999999999999999999999999964    58899999999988774

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.70  E-value=4e-08  Score=81.77  Aligned_cols=47  Identities=13%  Similarity=0.000  Sum_probs=41.9

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCH----HHHHHHHHHhcCCCCcc
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNE----KAVTAIVSFLLGPERAE  220 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~----~~~~~~L~~~~l~~~f~  220 (262)
                      ..+++||+.++|+.|+++|++++|+||.+.    ..+...|+.+|+..+++
T Consensus        99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~  149 (262)
T 3ocu_A           99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE  149 (262)
T ss_dssp             CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc
Confidence            368999999999999999999999999864    58899999999988773

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.70  E-value=2.6e-08  Score=84.03  Aligned_cols=77  Identities=14%  Similarity=0.170  Sum_probs=47.5

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-cCCCCcccceEEeCC----CCCCCCCChHHHhhhhhhhhhhh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGD----VVPRKKPDPVKICSLTVDIVCNV  251 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~-~l~~~f~~~~Iv~s~----~~~~~KPdp~~~~~~~~~~a~~~  251 (262)
                      .++++.++++.+....+++.+ ++.. .....+++.+ ...+.+.  .+.++.    ......+++...     +.+++.
T Consensus       143 ~~~~~~~~~~~~~~~~~ki~~-~~~~-~~~~~~~~~l~~~~~~~~--~~~s~~~~~ei~~~~~~K~~~l-----~~l~~~  213 (290)
T 3dnp_A          143 FVESLSDLLMDEPVSAPVIEV-YTEH-DIQHDITETITKAFPAVD--VIRVNDEKLNIVPKGVSKEAGL-----ALVASE  213 (290)
T ss_dssp             ECSCHHHHHHHSCCCCSEEEE-ECCG-GGHHHHHHHHHHHCTTEE--EEEEETTEEEEEETTCCHHHHH-----HHHHHH
T ss_pred             ccCCHHHHHhcCCCCceEEEE-eCCH-HHHHHHHHHHHhhCCcEE--EEEeCCCeEEEEECCCCHHHHH-----HHHHHH
Confidence            356677777777777788855 4433 3444554442 2233444  333332    233455667777     889999


Q ss_pred             cccCCcccccC
Q 024806          252 LKTHAHKNVLV  262 (262)
Q Consensus       252 lgv~p~e~v~I  262 (262)
                      +|++|+++++|
T Consensus       214 lgi~~~~~i~~  224 (290)
T 3dnp_A          214 LGLSMDDVVAI  224 (290)
T ss_dssp             TTCCGGGEEEE
T ss_pred             cCCCHHHEEEE
Confidence            99999999875

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=98.67  E-value=9e-09  Score=82.39  Aligned_cols=77  Identities=12%  Similarity=0.040  Sum_probs=69.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|++. ++++|+|++.+..++.+++.++...+|+  .+++.+++...|   .+|     ..+++.+|+
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~--~~l~rd~~~~~k---~~~-----lK~L~~Lg~  135 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFR--ARLFRESCVFHR---GNY-----VKDLSRLGR  135 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEE--EEECGGGCEEET---TEE-----ECCGGGSSS
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEE--EEEEcccceecC---Cce-----eeeHhHhCC
Confidence            46789999999999998 9999999999999999999999999999  889988877666   567     667899999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|++||+|
T Consensus       136 ~~~~~viv  143 (195)
T 2hhl_A          136 ELSKVIIV  143 (195)
T ss_dssp             CGGGEEEE
T ss_pred             ChhHEEEE
Confidence            99999986

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.57  E-value=4.4e-08  Score=82.60  Aligned_cols=67  Identities=9%  Similarity=0.031  Sum_probs=39.8

Q ss_pred             HHH-HCCCeEEEEe-CCC-HHHHHHHHHHhcCCCCcccceEEeCCC----CCCCCCChHHHhhhhhhhhhhhcccCCccc
Q 024806          187 QAL-EKGVKVAVCS-TSN-EKAVTAIVSFLLGPERAEKIQIFAGDV----VPRKKPDPVKICSLTVDIVCNVLKTHAHKN  259 (262)
Q Consensus       187 ~L~-~~G~~l~IvT-n~~-~~~~~~~L~~~~l~~~f~~~~Iv~s~~----~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~  259 (262)
                      .+. +..+++.++. ... ......+.+.++  +.+.  .+.++..    .....+++...     +.+++.+|++++++
T Consensus       160 ~l~~~~~~ki~i~~~~~~~~~~~~~l~~~~~--~~~~--~~~s~~~~~ei~~~~~~K~~~l-----~~l~~~lgi~~~e~  230 (283)
T 3dao_A          160 RLDRNDIIKFTVFHPDKCEELCTPVFIPAWN--KKAH--LAAAGKEWVDCNAKGVSKWTAL-----SYLIDRFDLLPDEV  230 (283)
T ss_dssp             GCCCSCCCEEEEECSSCHHHHHTTTHHHHHT--TTEE--EEEETTTEEEEEETTCCHHHHH-----HHHHHHTTCCGGGE
T ss_pred             HcCccCceEEEEEcChHHHHHHHHHHHHHhc--CCEE--EEEecCceEEEeeCCCcHHHHH-----HHHHHHhCCCHHHE
Confidence            344 5678999883 222 222334444443  4454  4455442    23344455666     88899999999999


Q ss_pred             ccC
Q 024806          260 VLV  262 (262)
Q Consensus       260 v~I  262 (262)
                      ++|
T Consensus       231 ia~  233 (283)
T 3dao_A          231 CCF  233 (283)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            875

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.55  E-value=3.1e-08  Score=78.34  Aligned_cols=77  Identities=10%  Similarity=0.043  Sum_probs=68.0

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|++. ++++|.|++.+..++.+++.++..++|+  .+++.+++...|   ..|     ..+++.+|.
T Consensus        54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~--~~~~rd~~~~~k---~~~-----~k~L~~Lg~  122 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFR--ARLFRESCVFHR---GNY-----VKDLSRLGR  122 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEE--EEECGGGSEEET---TEE-----ECCGGGTCS
T ss_pred             EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEE--EEEeccCceecC---CcE-----eccHHHhCC
Confidence            46799999999999998 9999999999999999999999999998  888888776544   456     567899999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|++||+|
T Consensus       123 ~~~~~viv  130 (181)
T 2ght_A          123 DLRRVLIL  130 (181)
T ss_dssp             CGGGEEEE
T ss_pred             CcceEEEE
Confidence            99999986

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.51  E-value=2.4e-07  Score=77.12  Aligned_cols=59  Identities=15%  Similarity=0.164  Sum_probs=40.4

Q ss_pred             CeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCC------CCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          193 VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD------VVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       193 ~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~------~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .++.+.  ........+.+.++.  .|+  .+.++.      .....++++..+     +.+++.+|++|+++++|
T Consensus       158 ~ki~~~--~~~~~~~~~~~~l~~--~~~--~~~~~~~~~~~ei~~~~~~K~~~l-----~~l~~~lgi~~~~~i~~  222 (274)
T 3fzq_A          158 HKICLW--SNEKVFDEVKDILQD--KME--LAQRDISSQYYEIIQKDFHKGKAI-----KRLQERLGVTQKETICF  222 (274)
T ss_dssp             CEEEEE--CCHHHHHHHHHHHGG--GEE--EEEEEGGGTEEEEEETTCSHHHHH-----HHHHHHHTCCSTTEEEE
T ss_pred             EEEEEE--cCHHHHHHHHHHhhc--ceE--EEeccCCCceEEEeeCCCCHHHHH-----HHHHHHcCCCHHHEEEE
Confidence            355444  555667777777643  355  444443      345677788888     88899999999999875

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.50  E-value=4.2e-08  Score=82.23  Aligned_cols=32  Identities=16%  Similarity=0.263  Sum_probs=14.1

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHc
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK  107 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~  107 (262)
                      |++|+|+||+||||+|+... +...+.++++++
T Consensus         3 m~~kli~~DlDGTLl~~~~~-i~~~~~~al~~l   34 (279)
T 3mpo_A            3 LTIKLIAIDIDGTLLNEKNE-LAQATIDAVQAA   34 (279)
T ss_dssp             --CCEEEECC------------CHHHHHHHHHH
T ss_pred             cceEEEEEcCcCCCCCCCCc-CCHHHHHHHHHH
Confidence            46999999999999999875 555566666553

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.47  E-value=1.2e-06  Score=79.36  Aligned_cols=81  Identities=19%  Similarity=0.259  Sum_probs=62.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-c-------------CCCCcccceEEeCCCCCCCCCChHH-
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-L-------------GPERAEKIQIFAGDVVPRKKPDPVK-  239 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~-~-------------l~~~f~~~~Iv~s~~~~~~KPdp~~-  239 (262)
                      +...|++..+|+.|++.| ++.++||+....+...++.+ |             +.++||  .|++..    .||..-. 
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD--~vI~~A----~KP~FF~~  317 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFD--LILVDA----RKPLFFGE  317 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCS--EEEESC----CTTGGGTT
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCC--EEEEeC----CCCCcccC
Confidence            566789999999999999 99999999999999999988 5             446898  666643    3555322 


Q ss_pred             ----------------------------HhhhhhhhhhhhcccCCcccccC
Q 024806          240 ----------------------------ICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       240 ----------------------------~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                                                  |..=.+..+++.+|+.+.+++||
T Consensus       318 ~~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYV  368 (555)
T 2jc9_A          318 GTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYI  368 (555)
T ss_dssp             CCCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEE
T ss_pred             CCcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEE
Confidence                                        10001267889999999999886

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=98.45  E-value=3.3e-08  Score=82.85  Aligned_cols=66  Identities=9%  Similarity=0.042  Sum_probs=47.2

Q ss_pred             HHHCCCeEEEEeCCCHHHHHHHHHHhc--CCCCcccceEEeC----CCCCCCCCChHHHhhhhhhhhhhhcccCCccccc
Q 024806          188 ALEKGVKVAVCSTSNEKAVTAIVSFLL--GPERAEKIQIFAG----DVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVL  261 (262)
Q Consensus       188 L~~~G~~l~IvTn~~~~~~~~~L~~~~--l~~~f~~~~Iv~s----~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~  261 (262)
                      +++.+++++++++..  ....+++.++  +.++|+  .+.++    +.....+|++..+     +.+++.+|++++++++
T Consensus       142 ~~~~~~ki~i~~~~~--~~~~~~~~l~~~~~~~~~--~~~s~~~~~ei~~~~~~K~~~~-----~~l~~~l~i~~~~~~~  212 (271)
T 1rlm_A          142 IDDVLFKFSLNLPDE--QIPLVIDKLHVALDGIMK--PVTSGFGFIDLIIPGLHKANGI-----SRLLKRWDLSPQNVVA  212 (271)
T ss_dssp             CCSCEEEEEEECCGG--GHHHHHHHHHHHTTTSSE--EEECSTTEEEEECTTCSHHHHH-----HHHHHHHTCCGGGEEE
T ss_pred             CCCceEEEEEEcCHH--HHHHHHHHHHHHcCCcEE--EEeccCCeEEEEcCCCChHHHH-----HHHHHHhCCCHHHEEE
Confidence            445678999988764  2555555553  556676  55555    3346778889998     8889999999999987


Q ss_pred             C
Q 024806          262 V  262 (262)
Q Consensus       262 I  262 (262)
                      |
T Consensus       213 ~  213 (271)
T 1rlm_A          213 I  213 (271)
T ss_dssp             E
T ss_pred             E
Confidence            5

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.39  E-value=3.2e-09  Score=88.49  Aligned_cols=28  Identities=7%  Similarity=0.094  Sum_probs=23.9

Q ss_pred             CCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          230 VPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       230 ~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ....+|++..+     +.+++.+|++|+++++|
T Consensus       182 ~~~~~~K~~~~-----~~~~~~~~~~~~~~~~i  209 (261)
T 2rbk_A          182 TAKGDTKQKGI-----DEIIRHFGIKLEETMSF  209 (261)
T ss_dssp             ESTTCSHHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             cCCCCChHHHH-----HHHHHHcCCCHHHEEEE
Confidence            45678889988     88899999999999875

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.33  E-value=6.3e-08  Score=82.51  Aligned_cols=33  Identities=18%  Similarity=0.310  Sum_probs=23.6

Q ss_pred             CCCCcEEEEecCccccccCcchHHHH-HHHHHHHc
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRIS-FNDTFKEK  107 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a-~~~~~~~~  107 (262)
                      +|++|+|+||+||||+|+... +... +.++++++
T Consensus        34 ~M~iKli~fDlDGTLld~~~~-i~~~~~~~al~~l   67 (304)
T 3l7y_A           34 SMSVKVIATDMDGTFLNSKGS-YDHNRFQRILKQL   67 (304)
T ss_dssp             --CCSEEEECCCCCCSCTTSC-CCHHHHHHHHHHH
T ss_pred             ceeeEEEEEeCCCCCCCCCCc-cCHHHHHHHHHHH
Confidence            367999999999999999875 4344 55655543

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.23  E-value=4.4e-06  Score=63.00  Aligned_cols=60  Identities=5%  Similarity=-0.145  Sum_probs=39.9

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHHhcCCCCcccceEEeC--C-----CCCCCCCChHHHh
Q 024806          178 RPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSFLLGPERAEKIQIFAG--D-----VVPRKKPDPVKIC  241 (262)
Q Consensus       178 ~pgv~e~L~~L~~~G~~l~IvTn~~~---~~~~~~L~~~~l~~~f~~~~Iv~s--~-----~~~~~KPdp~~~~  241 (262)
                      .|++.++|+.|+++|++++|+|+.+.   ..+...++.+|+.  ++  .|...  +     +.-.+||.+.+|.
T Consensus        26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~--~~--~I~~n~P~~~~~~~~~~rK~~~~~fI   95 (142)
T 2obb_A           26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FY--AANKDYPEEERDHQGFSRKLKADLFI   95 (142)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CS--EESSSSTTC---CCSCCSSCCCSEEE
T ss_pred             CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC--eE--EEEcCCchhhhcchhhcCCcCCCEEe
Confidence            46888999999999999999999973   4445555565552  22  22221  1     1235778888875

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.20  E-value=1.2e-05  Score=70.90  Aligned_cols=41  Identities=17%  Similarity=0.059  Sum_probs=38.2

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      ++||+.++++.|+++|++++|||++....++.+.+.+|+..
T Consensus       222 ~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y  262 (385)
T 4gxt_A          222 TLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNY  262 (385)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSC
T ss_pred             eCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCccc
Confidence            69999999999999999999999999999999999987643

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.13  E-value=2.3e-07  Score=76.92  Aligned_cols=30  Identities=27%  Similarity=0.441  Sum_probs=22.3

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKE  106 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~  106 (262)
                      ++|+|+||+||||+|+... +.....+++++
T Consensus         2 ~~kli~~DlDGTLl~~~~~-i~~~~~~al~~   31 (258)
T 2pq0_A            2 GRKIVFFDIDGTLLDEQKQ-LPLSTIEAVRR   31 (258)
T ss_dssp             CCCEEEECTBTTTBCTTSC-CCHHHHHHHHH
T ss_pred             CceEEEEeCCCCCcCCCCc-cCHHHHHHHHH
Confidence            5799999999999998875 44455555444

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=98.13  E-value=4.2e-07  Score=79.49  Aligned_cols=75  Identities=9%  Similarity=0.173  Sum_probs=58.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC-CcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhc-
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVL-  252 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~-~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~l-  252 (262)
                      ..+.||+.++|+.+. +++.++|.|++.+..+..+++.++... +|.. .+++.++.+.      +|     ...++++ 
T Consensus        74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~-ri~sr~~~g~------~~-----~KdL~~L~  140 (372)
T 3ef0_A           74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQD-RVLSRDDSGS------LA-----QKSLRRLF  140 (372)
T ss_dssp             EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSS-CEECTTTSSC------SS-----CCCGGGTC
T ss_pred             EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeee-EEEEecCCCC------cc-----eecHHHhc
Confidence            668899999999999 569999999999999999999998877 7863 4676666432      34     2334544 


Q ss_pred             ccCCcccccC
Q 024806          253 KTHAHKNVLV  262 (262)
Q Consensus       253 gv~p~e~v~I  262 (262)
                      |.++.++|+|
T Consensus       141 ~~dl~~viii  150 (372)
T 3ef0_A          141 PCDTSMVVVI  150 (372)
T ss_dssp             SSCCTTEEEE
T ss_pred             CCCCceEEEE
Confidence            8888888765

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=98.09  E-value=1.4e-05  Score=68.84  Aligned_cols=40  Identities=20%  Similarity=0.104  Sum_probs=33.6

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l  215 (262)
                      ..+.+++.++|+.|++ |++++++|+.....+....+.+++
T Consensus       102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~  141 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGV  141 (332)
T ss_dssp             CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhh
Confidence            4678999999999999 999999999886777777776654

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=98.03  E-value=4.9e-05  Score=65.40  Aligned_cols=52  Identities=19%  Similarity=0.207  Sum_probs=40.7

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s  227 (262)
                      .++|++.++++.|+++|++++|||.+....++.+.+..+..--.+.+.|+++
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~  194 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGV  194 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEE
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEee
Confidence            5799999999999999999999999999999988887533222222246654

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=97.94  E-value=1.3e-05  Score=65.23  Aligned_cols=37  Identities=27%  Similarity=0.180  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       181 v~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +.+.|+.|+++|++++++|+.+...+...++.+++..
T Consensus        27 ~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~   63 (227)
T 1l6r_A           27 AIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   63 (227)
T ss_dssp             HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC
Confidence            4467788889999999999999999999999887754

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.93  E-value=2e-05  Score=68.53  Aligned_cols=51  Identities=16%  Similarity=0.106  Sum_probs=38.8

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHH-HhcCCCCcccceEEeCCC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVS-FLLGPERAEKIQIFAGDV  229 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~L~-~~~l~~~f~~~~Iv~s~~  229 (262)
                      ++||+.++|+.|+++|+++.++||++   .......|. .+|+.--.+  .|++|..
T Consensus        30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~--~i~ts~~   84 (352)
T 3kc2_A           30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPL--QIIQSHT   84 (352)
T ss_dssp             ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGG--GEECTTG
T ss_pred             eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChh--hEeehHH
Confidence            35788899999999999999999985   344445555 688876555  7887753

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.90  E-value=2.8e-05  Score=65.27  Aligned_cols=35  Identities=20%  Similarity=0.175  Sum_probs=30.1

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +.|+.|+++|++++++|+.+...+...++.+++..
T Consensus        29 ~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~   63 (282)
T 1rkq_A           29 NAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ   63 (282)
T ss_dssp             HHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred             HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence            66778888999999999999888889999887754

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.88  E-value=1.6e-05  Score=66.71  Aligned_cols=21  Identities=19%  Similarity=0.230  Sum_probs=16.2

Q ss_pred             CCCCcEEEEecCccccccCcc
Q 024806           74 SVLPSALLFDCDGVLVDTEKD   94 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~   94 (262)
                      .+++|+|+||+||||+|+...
T Consensus        18 ~~~~kli~~DlDGTLl~~~~~   38 (285)
T 3pgv_A           18 QGMYQVVASDLDGTLLSPDHF   38 (285)
T ss_dssp             ---CCEEEEECCCCCSCTTSC
T ss_pred             cCcceEEEEeCcCCCCCCCCc
Confidence            468999999999999987653

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=97.82  E-value=3.4e-05  Score=64.89  Aligned_cols=19  Identities=21%  Similarity=0.433  Sum_probs=16.4

Q ss_pred             CCcEEEEecCccccccCcc
Q 024806           76 LPSALLFDCDGVLVDTEKD   94 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~   94 (262)
                      |+|+|+||+||||+|+...
T Consensus         3 mikli~~DlDGTLl~~~~~   21 (288)
T 1nrw_A            3 AMKLIAIDLDGTLLNSKHQ   21 (288)
T ss_dssp             -CCEEEEECCCCCSCTTSC
T ss_pred             ceEEEEEeCCCCCCCCCCc
Confidence            5899999999999998764

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=97.79  E-value=0.00022  Score=60.26  Aligned_cols=47  Identities=11%  Similarity=0.134  Sum_probs=42.3

Q ss_pred             hcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCC
Q 024806          172 KKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER  218 (262)
Q Consensus       172 ~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~  218 (262)
                      ....++.||+.++++.|+++|++++++|++....++.+++.+|+...
T Consensus       137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~  183 (297)
T 4fe3_A          137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS  183 (297)
T ss_dssp             TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCT
T ss_pred             hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcc
Confidence            33578999999999999999999999999999999999999987544

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.75  E-value=4.2e-05  Score=64.96  Aligned_cols=36  Identities=22%  Similarity=0.331  Sum_probs=30.0

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCCHHHHHHHH--HHhc-CC
Q 024806          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIV--SFLL-GP  216 (262)
Q Consensus       181 v~e~L~~L~~~G~~l~IvTn~~~~~~~~~L--~~~~-l~  216 (262)
                      +.+.|+.|+++|++++++|+.+...+...+  +.++ +.
T Consensus        50 ~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~   88 (301)
T 2b30_A           50 NIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN   88 (301)
T ss_dssp             HHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHT
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccc
Confidence            446777888899999999999988888888  8876 54

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.73  E-value=5.7e-05  Score=55.67  Aligned_cols=27  Identities=15%  Similarity=0.250  Sum_probs=22.9

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCH
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNE  203 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~  203 (262)
                      +.+++.++|+.|+++|++++++|+.+.
T Consensus        25 ~~~~~~~~l~~l~~~Gi~~~iaTGR~~   51 (126)
T 1xpj_A           25 PRLDVIEQLREYHQLGFEIVISTARNM   51 (126)
T ss_dssp             BCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred             CCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence            457777889999999999999999864

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.71  E-value=8.6e-05  Score=62.09  Aligned_cols=36  Identities=19%  Similarity=0.186  Sum_probs=31.5

Q ss_pred             HHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       182 ~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .++|+.|+++|++++++|+.+...+...++.+++..
T Consensus        32 ~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   67 (275)
T 1xvi_A           32 APWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   67 (275)
T ss_dssp             HHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            477788889999999999999999999999887754

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.54  E-value=0.00016  Score=59.55  Aligned_cols=27  Identities=22%  Similarity=0.186  Sum_probs=21.5

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCCHHHHH
Q 024806          181 VAKLIDQALEKGVKVAVCSTSNEKAVT  207 (262)
Q Consensus       181 v~e~L~~L~~~G~~l~IvTn~~~~~~~  207 (262)
                      +.++|+.|+++|++++++|+.+...+.
T Consensus        26 ~~~~l~~l~~~g~~~~iaTGR~~~~~~   52 (246)
T 3f9r_A           26 MRALIKRARGAGFCVGTVGGSDFAKQV   52 (246)
T ss_dssp             HHHHHHHHHHTTCEEEEECSSCHHHHH
T ss_pred             HHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence            345688899999999999999866443

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.52  E-value=0.0002  Score=59.52  Aligned_cols=18  Identities=28%  Similarity=0.587  Sum_probs=15.4

Q ss_pred             CCcEEEEecCccccccCc
Q 024806           76 LPSALLFDCDGVLVDTEK   93 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~   93 (262)
                      |+|.|+||+||||++...
T Consensus         1 mikli~~DlDGTLl~~~~   18 (268)
T 1nf2_A            1 MYRVFVFDLDGTLLNDNL   18 (268)
T ss_dssp             CBCEEEEECCCCCSCTTS
T ss_pred             CccEEEEeCCCcCCCCCC
Confidence            479999999999998654

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.50  E-value=0.00016  Score=59.40  Aligned_cols=35  Identities=11%  Similarity=0.082  Sum_probs=29.8

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +.|+.|+++|++++|+|+.+...+...++.+++..
T Consensus        24 ~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~   58 (249)
T 2zos_A           24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET   58 (249)
T ss_dssp             HHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCc
Confidence            56677888999999999999899999999887653

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=97.33  E-value=0.0014  Score=58.59  Aligned_cols=52  Identities=10%  Similarity=0.047  Sum_probs=44.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---------cCCCCcccceEEeCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---------LGPERAEKIQIFAGD  228 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~---------~l~~~f~~~~Iv~s~  228 (262)
                      +...|.+..+|+.|++.|-++.++||++-..+...++.+         .+.++||  .|++..
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFD--vVIv~A  245 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFE--FVITLA  245 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCS--EEEESC
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcC--EEEECC
Confidence            455799999999999999999999999999998888875         3667999  777754

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=97.12  E-value=0.00024  Score=56.80  Aligned_cols=77  Identities=10%  Similarity=-0.034  Sum_probs=60.7

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC-CCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP-ERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~-~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ....||+.++|+.+. +++.++|.|++.+..++.+++.++.. .+|+  .++..+....   .+..|     ...++.+|
T Consensus        58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~--~rl~R~~c~~---~~g~y-----~KdL~~Lg  126 (204)
T 3qle_A           58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVS--YNLFKEHCVY---KDGVH-----IKDLSKLN  126 (204)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEE--EEECGGGSEE---ETTEE-----ECCGGGSC
T ss_pred             EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEE--EEEEecceeE---ECCee-----eecHHHhC
Confidence            356799999999998 56999999999999999999999876 4887  6666665432   12335     45678889


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      .+++++|+|
T Consensus       127 rdl~~vIiI  135 (204)
T 3qle_A          127 RDLSKVIII  135 (204)
T ss_dssp             SCGGGEEEE
T ss_pred             CChHHEEEE
Confidence            988888875

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.03  E-value=0.00037  Score=57.50  Aligned_cols=32  Identities=31%  Similarity=0.397  Sum_probs=22.6

Q ss_pred             CCCCcEEEEecCccccc-cCcchHHHHHHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVD-TEKDGHRISFNDTFKE  106 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d-~~~~~~~~a~~~~~~~  106 (262)
                      ++|+|+|+||+||||+| +... ......+++++
T Consensus         9 ~~miKli~~DlDGTLl~~~~~~-i~~~~~~al~~   41 (268)
T 3r4c_A            9 SHMIKVLLLDVDGTLLSFETHK-VSQSSIDALKK   41 (268)
T ss_dssp             CSCCCEEEECSBTTTBCTTTCS-CCHHHHHHHHH
T ss_pred             CCceEEEEEeCCCCCcCCCCCc-CCHHHHHHHHH
Confidence            45799999999999999 4443 33445555544

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=96.72  E-value=0.0026  Score=52.22  Aligned_cols=33  Identities=18%  Similarity=0.139  Sum_probs=24.4

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       181 v~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +.+.|+.|+++|++++++|+.+...+.    .+++..
T Consensus        21 ~~~al~~l~~~Gi~v~iaTGR~~~~~~----~l~~~~   53 (259)
T 3zx4_A           21 AREALERLRALGVPVVPVTAKTRKEVE----ALGLEP   53 (259)
T ss_dssp             THHHHHHHHHTTCCEEEBCSSCHHHHH----HTTCCS
T ss_pred             HHHHHHHHHHCCCeEEEEeCCCHHHHH----HcCCCC
Confidence            346677788899999999999866665    555543

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=96.61  E-value=0.0023  Score=52.15  Aligned_cols=33  Identities=12%  Similarity=0.276  Sum_probs=25.7

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF  212 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~  212 (262)
                      +.+.++|+.|+++| +++|+|+.+...+...++.
T Consensus        26 ~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~   58 (239)
T 1u02_A           26 AGLLSLISDLKERF-DTYIVTGRSPEEISRFLPL   58 (239)
T ss_dssp             HHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCS
T ss_pred             HHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhcc
Confidence            55667888888899 9999999987776666544

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=95.91  E-value=0.0037  Score=50.94  Aligned_cols=32  Identities=25%  Similarity=0.426  Sum_probs=21.5

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKE  106 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~  106 (262)
                      .|.+|.|+||+||||++.... ......+++++
T Consensus         3 ~~~~kli~~DlDGTLl~~~~~-i~~~~~~al~~   34 (246)
T 2amy_A            3 APGPALCLFDVDGTLTAPRQK-ITKEMDDFLQK   34 (246)
T ss_dssp             -CCSEEEEEESBTTTBCTTSC-CCHHHHHHHHH
T ss_pred             CCCceEEEEECCCCcCCCCcc-cCHHHHHHHHH
Confidence            457899999999999987653 32334444443

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=94.65  E-value=0.015  Score=47.88  Aligned_cols=20  Identities=30%  Similarity=0.405  Sum_probs=15.9

Q ss_pred             CCCcEEEEecCccccccCcc
Q 024806           75 VLPSALLFDCDGVLVDTEKD   94 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~   94 (262)
                      .++|.|+||+||||++....
T Consensus        11 ~~~kli~~DlDGTLl~~~~~   30 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPARQK   30 (262)
T ss_dssp             --CEEEEEESBTTTBSTTSC
T ss_pred             cCeEEEEEeCccCCCCCCCc
Confidence            46899999999999987653

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=93.89  E-value=0.077  Score=49.68  Aligned_cols=45  Identities=18%  Similarity=0.144  Sum_probs=41.5

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~  220 (262)
                      ++.|++.+.++.|+++|++++++|+.+...++.+.+.+|+..+|.
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~  501 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA  501 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEE
Confidence            578999999999999999999999999999999999999876664

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=93.81  E-value=0.097  Score=43.20  Aligned_cols=50  Identities=16%  Similarity=0.181  Sum_probs=41.0

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhcCC-CCcccceEEeCC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCST---SNEKAVTAIVSFLLGP-ERAEKIQIFAGD  228 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn---~~~~~~~~~L~~~~l~-~~f~~~~Iv~s~  228 (262)
                      ++|++.+.|+.|+++|++++++||   .....+...++.+|+. ..++  .++++.
T Consensus        31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~--~ii~~~   84 (284)
T 2hx1_A           31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITAD--KIISSG   84 (284)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGG--GEEEHH
T ss_pred             eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHh--hEEcHH
Confidence            358899999999999999999998   4667788888999887 6666  566654

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=93.16  E-value=0.11  Score=46.08  Aligned_cols=55  Identities=11%  Similarity=0.250  Sum_probs=46.5

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC-CcccceEEeCCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVP  231 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~-~f~~~~Iv~s~~~~  231 (262)
                      ....||+.++|+.+.+ +|.++|.|.+.+..+..+++.+.... +|.. .+++.++.+
T Consensus        82 V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~-Rl~sRd~cg  137 (442)
T 3ef1_A           82 IKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVAKIIDPTGKLFQD-RVLSRDDSG  137 (442)
T ss_dssp             EEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHHHHHCTTSTTTTT-CEECTTTSS
T ss_pred             EEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHHHHHHHhccCCccccc-eEEEecCCC
Confidence            5678999999999984 59999999999999999999997776 7873 466666654

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=92.98  E-value=0.061  Score=52.94  Aligned_cols=45  Identities=20%  Similarity=0.156  Sum_probs=41.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      -++.||+.++++.|+++|+++.++|+.....+..+.+.+|+....
T Consensus       602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~  646 (995)
T 3ar4_A          602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGEN  646 (995)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTT
T ss_pred             CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCC
Confidence            367899999999999999999999999999999999999997654

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=92.74  E-value=0.21  Score=40.62  Aligned_cols=46  Identities=17%  Similarity=0.269  Sum_probs=36.1

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhcCCCCcccceEEe
Q 024806          179 PGVAKLIDQALEKGVKVAVCST---SNEKAVTAIVSFLLGPERAEKIQIFA  226 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn---~~~~~~~~~L~~~~l~~~f~~~~Iv~  226 (262)
                      |++.++|+.|+++|++++++||   .+...+...++.+|+....+  .+++
T Consensus        25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~--~ii~   73 (266)
T 3pdw_A           25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEE--QVFT   73 (266)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGG--GEEE
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHH--HccC
Confidence            5677999999999999999999   56667777888888765544  4444

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=92.36  E-value=0.045  Score=44.41  Aligned_cols=25  Identities=4%  Similarity=0.069  Sum_probs=18.8

Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .-+++...     +.+++.+|++++++++|
T Consensus       160 ~~~K~~~l-----~~l~~~~~~~~~~~~~~  184 (244)
T 1s2o_A          160 RSNKGNAT-----QYLQQHLAMEPSQTLVC  184 (244)
T ss_dssp             TCSHHHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             CCChHHHH-----HHHHHHhCCCHHHEEEE
Confidence            33455666     77899999999998864

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=91.88  E-value=0.093  Score=44.68  Aligned_cols=42  Identities=14%  Similarity=0.263  Sum_probs=37.6

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      ..||+.++|+.+.+. |.++|.|.+....+..+++.++....+
T Consensus       165 ~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~Ld~~~~~  206 (320)
T 3shq_A          165 MRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLLGVASND  206 (320)
T ss_dssp             BCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHTTCTTCS
T ss_pred             eCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHhCCCCCc
Confidence            569999999999965 999999999999999999999776653

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=91.06  E-value=0.25  Score=40.17  Aligned_cols=47  Identities=17%  Similarity=0.321  Sum_probs=36.7

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhcCCCCcccceEEeC
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~---~~~~~~~~L~~~~l~~~f~~~~Iv~s  227 (262)
                      |++.++|+.|+++|++++++||+   +...+...++.+|+....+  .++++
T Consensus        24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~--~ii~~   73 (264)
T 3epr_A           24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLE--TIYTA   73 (264)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGG--GEEEH
T ss_pred             cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChh--heecH
Confidence            78889999999999999999964   5566777788887765555  45553

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=90.93  E-value=0.22  Score=47.29  Aligned_cols=45  Identities=11%  Similarity=0.245  Sum_probs=41.2

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~  220 (262)
                      ++.|++.+.|+.|+++|+++.++|+.+...++.+.+.+|+.++|.
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a  598 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVA  598 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEEC
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEE
Confidence            577999999999999999999999999999999999999876554

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=90.72  E-value=0.26  Score=40.12  Aligned_cols=48  Identities=19%  Similarity=0.216  Sum_probs=34.8

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHHhcCCCCcccceEEeC
Q 024806          178 RPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       178 ~pgv~e~L~~L~~~G~~l~IvTn~~~---~~~~~~L~~~~l~~~f~~~~Iv~s  227 (262)
                      +|++.++|+.|+++|++++++||+..   ..+...++.+|+...++  .++++
T Consensus        19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~--~i~~~   69 (263)
T 1zjj_A           19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSS--IIITS   69 (263)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGG--GEEEH
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChh--hEEec
Confidence            47899999999999999999999864   33444455567755444  45543

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=89.95  E-value=0.36  Score=45.79  Aligned_cols=45  Identities=18%  Similarity=0.144  Sum_probs=41.2

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~  220 (262)
                      ++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+..+|.
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~  579 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA  579 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEc
Confidence            678999999999999999999999999999999999999865553

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=89.80  E-value=0.53  Score=39.22  Aligned_cols=40  Identities=15%  Similarity=0.138  Sum_probs=33.0

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhcCC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCST---SNEKAVTAIVSFLLGP  216 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn---~~~~~~~~~L~~~~l~  216 (262)
                      ++|++.+.|+.|+++|++++++||   .+...+...++.+|+.
T Consensus        38 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~   80 (306)
T 2oyc_A           38 AVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG   80 (306)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence            357888999999999999999997   4566677788888775

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=86.37  E-value=1.1  Score=35.51  Aligned_cols=40  Identities=10%  Similarity=0.093  Sum_probs=34.3

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       178 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .+...+.|+.|+++|++++++|+.+...+..+++.+|+..
T Consensus        22 ~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~   61 (231)
T 1wr8_A           22 HEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG   61 (231)
T ss_dssp             CHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC
Confidence            3567788999999999999999999888888888887643

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=85.79  E-value=1.7  Score=35.08  Aligned_cols=41  Identities=12%  Similarity=0.153  Sum_probs=32.7

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhcCCC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGPE  217 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~---~~~~~~~~L~~~~l~~  217 (262)
                      +.|++.++|+.|+++|+++.++||+   +...+...++.+|+..
T Consensus        34 ~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~   77 (271)
T 1vjr_A           34 LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV   77 (271)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred             ECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            3478889999999999999999965   5566777778777643

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=83.99  E-value=2.5  Score=34.20  Aligned_cols=42  Identities=17%  Similarity=0.239  Sum_probs=36.4

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .+.+...++|+.|+++|++++++|+.+...+...++.+++..
T Consensus        22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   63 (279)
T 3mpo_A           22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDG   63 (279)
T ss_dssp             --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence            456788899999999999999999999999999999987764

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=82.11  E-value=2.8  Score=33.94  Aligned_cols=39  Identities=10%  Similarity=0.131  Sum_probs=34.2

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       178 ~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      .+...++|+.|+++|++++++|+.+...+...++.+++.
T Consensus        24 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   62 (279)
T 4dw8_A           24 SSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMN   62 (279)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGG
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCC
Confidence            356778899999999999999999999999999988764

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=81.94  E-value=1.8  Score=42.73  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=39.0

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      ++.|++.+.|+.|+++|+++.++|+.....+..+.+.+|+..
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~  640 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIIS  640 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSC
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence            568999999999999999999999999999999999998863

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=80.87  E-value=1.3  Score=34.66  Aligned_cols=18  Identities=22%  Similarity=0.292  Sum_probs=15.4

Q ss_pred             CCCcEEEEecCccccccC
Q 024806           75 VLPSALLFDCDGVLVDTE   92 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~   92 (262)
                      ...+.+|+|+||||+++.
T Consensus        26 ~~k~~LVLDLD~TLvhs~   43 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSS   43 (195)
T ss_dssp             TTCCEEEECCBTTTEEEE
T ss_pred             CCCeEEEEccccceEccc
Confidence            356799999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	262
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	5e-11
d1swva_	257	c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba	9e-11
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	1e-08
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	2e-08
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	3e-08
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	1e-07
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	1e-07
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	3e-07
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	3e-07
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	4e-07
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	6e-07
d2hcfa1	228	c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C	1e-06
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	2e-06
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	4e-06
d2ah5a1	210	c.108.1.6 (A:1-210) predicted phosphatase SP0104 {	5e-06
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	1e-05
d1zrna_	220	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse	2e-05
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	9e-04
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	0.001
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	0.002
d1nnla_	217	c.108.1.4 (A:) Phosphoserine phosphatase {Human (H	0.003

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.6 bits (140), Expect = 5e-11
 Identities = 23/166 (13%), Positives = 45/166 (27%), Gaps = 6/166 (3%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
              FD DGVL      G   +F  + +   L   + +  Y      G  ++ M      +
Sbjct: 2   VAAFDLDGVLALPSIAG---AFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFS 58

Query: 139 GWPEKAPSD-EEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
            W         +  K   A+L +  +   +         +   + +      +KG    +
Sbjct: 59  QWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCI 118

Query: 198 CSTSNEKAVTAIVSFLL--GPERAEKIQIFAGDVVPRKKPDPVKIC 241
            + +         S              +     V   KP+P    
Sbjct: 119 VTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYN 164

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

 Score = 58.3 bits (139), Expect = 9e-11
 Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 8/128 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE---RMTAYF 135
           A++F   G  VD         F + F   + GV    +   +   +G  K    R     
Sbjct: 4   AVIFAWAGTTVDYGCFAPLEVFMEIF--HKRGVAITAEEARKP--MGLLKIDHVRALTEM 59

Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
            +          +   +  I  +++   E+   ++ +   P+  GV ++I    E+G+K+
Sbjct: 60  PRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPI-NGVKEVIASLRERGIKI 118

Query: 196 AVCSTSNE 203
              +    
Sbjct: 119 GSTTGYTR 126

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 51.7 bits (122), Expect = 1e-08
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A +FD DG+L+D+E      +  D      LGV        EL    G +  M       
Sbjct: 5   AAIFDMDGLLIDSEPL-WDRAELDVM--ASLGVDISRR--NELPDTLGLRIDMVVDLWYA 59

Query: 139 GWPEKAPSDEEERKQFIA 156
             P   PS +E  ++ IA
Sbjct: 60  RQPWNGPSRQEVVERVIA 77

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 51.0 bits (120), Expect = 2e-08
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK 123
            ++FDCDGVLVD+E        +      E G    V+  GE   
Sbjct: 4   LIIFDCDGVLVDSEII-AAQVESRLL--TEAGYPISVEEMGERFA 45

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 50.6 bits (119), Expect = 3e-08
 Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 6/94 (6%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
           +A ++D DG L+D+ +        +TF   +  + +D +   ++ +              
Sbjct: 2   TAFIWDLDGTLLDSYEA-ILSGIEETF--AQFSIPYDKE---KVREFIFKYSVQDLLVRV 55

Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
                       + +    +    +  L     E
Sbjct: 56  AEDRNLDVEVLNQVRAQSLAEKNAQVVLMPGARE 89

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (115), Expect = 1e-07
 Identities = 20/139 (14%), Positives = 36/139 (25%), Gaps = 8/139 (5%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A +FD DGVL              T +   L      D + +    G     M      +
Sbjct: 4   AAVFDLDGVLALPAVF---GVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLS 60

Query: 139 GWPE---KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
            W     +      E  +     +    E+F   I      +   + +      +KG   
Sbjct: 61  QWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISA--RKINRPMLQAALMLRKKGFTT 118

Query: 196 AVCSTSNEKAVTAIVSFLL 214
           A+ + +             
Sbjct: 119 AILTNTWLDDRAERDGLAQ 137

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 48.7 bits (114), Expect = 1e-07
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DGV+ DT +  H  ++      +E+G+      + E LK    ++ +    +  
Sbjct: 4   AVLFDLDGVITDTAEY-HFRAWKALA--EEIGINGVDRQFNEQLKGVSREDSLQKILDLA 60

Query: 139 GW 140
             
Sbjct: 61  DK 62

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.9 bits (112), Expect = 3e-07
 Identities = 20/131 (15%), Positives = 47/131 (35%), Gaps = 16/131 (12%)

Query: 62  MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW--DVDLYG 119
           M +  VR          A+ FD D  L+DT     R    +  K  +    +  + ++  
Sbjct: 1   MGLSRVR----------AVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKEEAEIIC 49

Query: 120 ELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEK---KLLP 176
           + +++   KE    Y         +  +E  ++    + +++  E    L +    + + 
Sbjct: 50  DKVQVKLSKECFHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMI 109

Query: 177 LRPGVAKLIDQ 187
           L   V  ++ +
Sbjct: 110 LADDVKAMLTE 120

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 47.1 bits (110), Expect = 3e-07
 Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 15/135 (11%)

Query: 81  LFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGW 140
           +FD   V+VD + +    +++D  +     +     +     +   G+    A+      
Sbjct: 4   IFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCH 63

Query: 141 PEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCST 200
               P   E+               F    +   + LRP V  ++ +  E+G +V V S 
Sbjct: 64  EMALPLSYEQ---------------FSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSN 108

Query: 201 SNEKAVTAIVSFLLG 215
           +N    T        
Sbjct: 109 TNRLHTTFWPEEYPE 123

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 47.5 bits (111), Expect = 4e-07
 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 9/124 (7%)

Query: 79  ALLFDCDGVLVDTEKDG--HRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
           A+ FD  G L+  E +   H     +   +  L     +D Y +L      +E  + Y  
Sbjct: 4   AVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLT-----REAFSNYAG 58

Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE--KKLLPLRPGVAKLIDQALEKGVK 194
           K   P +   +E  RK       K     + + +   ++   L P V +++     K   
Sbjct: 59  KPYRPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGKYHV 118

Query: 195 VAVC 198
             + 
Sbjct: 119 GMIT 122

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 46.4 bits (108), Expect = 6e-07
 Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 3/44 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELL 122
           AL+FD DG L +++   +     +       G  +      +  
Sbjct: 5   ALMFDIDGTLTNSQPA-YTTVMREVL--ATYGKPFSPAQAQKTF 45

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

 Score = 46.3 bits (108), Expect = 1e-06
 Identities = 24/123 (19%), Positives = 39/123 (31%), Gaps = 10/123 (8%)

Query: 80  LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTG 139
           +LFD DG L+  E   +R    D   E   G       +    K+ G    +    +  G
Sbjct: 5   VLFDIDGTLLKVESM-NRRVLADALIE-VYGTEGSTGSHDFSGKMDG--AIIYEVLSNVG 60

Query: 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCS 199
                     E         +    LF     ++ + L  GV +L+D    +   +    
Sbjct: 61  LE------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLL 114

Query: 200 TSN 202
           T N
Sbjct: 115 TGN 117

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 45.3 bits (105), Expect = 2e-06
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD 114
            + FD DG LV++  D   +S N   K+  L    +
Sbjct: 6   LIGFDLDGTLVNSLPD-LALSINSALKDVNLPQASE 40

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 43.9 bits (102), Expect = 4e-06
 Identities = 6/35 (17%), Positives = 13/35 (37%), Gaps = 1/35 (2%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW 113
             ++D  G L+D  +     +F +T     +    
Sbjct: 5   DYIWDLGGTLLDNYET-STAAFVETLALYGITQDH 38

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 44.1 bits (102), Expect = 5e-06
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYG 119
           A+ FD DG LVD+       +F  TFKE  +       + G
Sbjct: 6   AIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPSPDAKTIRG 45

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 42.9 bits (99), Expect = 1e-05
 Identities = 21/113 (18%), Positives = 35/113 (30%), Gaps = 12/113 (10%)

Query: 79  ALLFDCDGVLVDTEK---------DGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE 129
           A++FD  G L D +           G        +++K+L  +W   L G          
Sbjct: 4   AVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63

Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVA 182
              AY   T   E    DE        + ++            +L PL+  + 
Sbjct: 64  EALAYTLGTLGLEP---DESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAIL 113

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

 Score = 42.6 bits (98), Expect = 2e-05
 Identities = 13/90 (14%), Positives = 23/90 (25%), Gaps = 9/90 (10%)

Query: 79  ALLFDCDGVLVDTEKD---------GHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE 129
            + FD  G L D             G     +  +++K+L  TW   L    +      E
Sbjct: 4   GIAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATE 63

Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLH 159
               +  +    +               L 
Sbjct: 64  DALRFTCRHLGLDLDARTRSTLCDAYLRLA 93

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (85), Expect = 9e-04
 Identities = 21/187 (11%), Positives = 53/187 (28%), Gaps = 27/187 (14%)

Query: 76  LPS---ALLFDCDGVLVDTEKDGHRISFNDTFK--EKELGVTWDVDLYGELLK-IGGGKE 129
           +P+    +L D +G           I F    +  ++ L   W+ +   + +  +    E
Sbjct: 3   VPAEVTVILLDIEGTTTPIAFV-KDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAE 61

Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL--------------- 174
                      P  + +  ++ +Q I ++         +  +                  
Sbjct: 62  EDAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTA 121

Query: 175 ----LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV 230
                     V   + +  E G+KV + S+ + +A   +           ++     D  
Sbjct: 122 GRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTK 180

Query: 231 PRKKPDP 237
              K + 
Sbjct: 181 IGHKVES 187

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.3 bits (83), Expect = 0.001
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 5/66 (7%)

Query: 76  LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF 135
           LP   +FD D  L     D H    +  F +   G     D  G+ +++      +    
Sbjct: 4   LPKLAVFDLDYTLWPFWVDTH---VDPPFHKSSDGTV--RDRRGQNIQLYPEVPEVLGRL 58

Query: 136 NKTGWP 141
              G P
Sbjct: 59  QSLGVP 64

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.3 bits (82), Expect = 0.002
 Identities = 16/164 (9%), Positives = 44/164 (26%), Gaps = 9/164 (5%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFK--EKELGVTWDVDLYGELLK--IGGGKERMTA 133
           S  L D +G +           F        + +           +L       KE++ A
Sbjct: 4   STYLLDIEGTVCPISFV-KETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQA 62

Query: 134 YFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
           +  +    +      ++ + ++ +      ++   +    +  ++      I  +     
Sbjct: 63  HILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKA 122

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           +  +     +    A  S  L       I  +       KK + 
Sbjct: 123 QKLLFGYVQDPNAPAHDSLDL----NSYIDGYFDINTSGKKTET 162

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (81), Expect = 0.003
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 27/125 (21%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+ FD D  ++  E                     D     EL KI G ++ ++    + 
Sbjct: 12  AVCFDVDSTVIREE-------------------GID-----ELAKICGVEDAVSEMTRRA 47

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
                     +       +L +   E    LI ++   L PG+ +L+ +  E+ V+V + 
Sbjct: 48  MGGAV---PFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLI 104

Query: 199 STSNE 203
           S    
Sbjct: 105 SGGFR 109

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	262
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.94
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.92
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.92
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.92
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.92
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.91
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.91
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.89
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.88
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.87
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.86
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.86
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.83
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.83
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.81
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.79
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.78
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.67
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.66
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.55
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.55
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.48
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.41
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.38
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.35
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.34
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.11
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.07
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	98.98
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	98.86
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	98.85
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.78
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.58
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	98.5
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.14
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.11
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	97.84
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.81
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.71
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	97.69
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.64
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	97.55
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.55
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	97.5
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	97.37
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.25
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	97.0
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	96.98
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	96.43
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	96.05
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	95.9
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	95.62
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	94.46
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	94.0
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	93.78
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	93.3
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	92.56
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	92.55
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	92.28
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	91.69
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	88.78
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	86.5

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=9.6e-27  Score=188.27  Aligned_cols=165  Identities=18%  Similarity=0.285  Sum_probs=124.9

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHH-HHHhcCCCCCCCCcHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      .||+||||+||||+|+.+. +..++.++++++|++.+.. +.+...  .+........ ......+..   ...   .+.
T Consensus         2 ~i~a~iFD~DGTL~dt~~~-~~~a~~~~~~~~g~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~---~~~   71 (218)
T d1te2a_           2 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISRR-NELPDT--LGLRIDMVVDLWYARQPWNG---PSR---QEV   71 (218)
T ss_dssp             CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCGGGG-GGSCCC--TTCCHHHHHHHHHHHSCCSS---SCH---HHH
T ss_pred             cceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCCCHH-HHHHHH--hCCCccchhhhhhhcccccc---hhH---HHH
Confidence            5899999999999999886 8889999999998876532 222222  3334333333 333333332   111   122


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      .+...+    .+.+.+.. ..+++||+.++|+.|+++|++++|+||+++..++.+++.+|+.++|+  .++++++++..|
T Consensus        72 ~~~~~~----~~~~~~~~-~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~--~i~~~~~~~~~K  144 (218)
T d1te2a_          72 VERVIA----RAISLVEE-TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD--ALASAEKLPYSK  144 (218)
T ss_dssp             HHHHHH----HHHHHHHH-HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEECTTSSCCT
T ss_pred             HHHHHH----HHHHhhhc-cccccchHHHHHHHhhhcccccccccccccccccccccccccccccc--ccccccccccch
Confidence            222222    22233322 26789999999999999999999999999999999999999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     +.+++++|++|++++||
T Consensus       145 p~~~~~-----~~~~~~l~~~~~~~l~i  167 (218)
T d1te2a_         145 PHPQVY-----LDCAAKLGVDPLTCVAL  167 (218)
T ss_dssp             TSTHHH-----HHHHHHHTSCGGGEEEE
T ss_pred             hhHHHH-----HHHHHHcCCCchhcEEE
Confidence            999999     88999999999999986

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.92  E-value=5.3e-26  Score=182.72  Aligned_cols=160  Identities=14%  Similarity=0.245  Sum_probs=122.9

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |.+|+||||+||||+|+.+. +..+|.++++++|.+..  .+.+.+.  .+...+...   .+.+..      ....+  
T Consensus         1 M~~k~viFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~--~~~~~~~--~~~~~~~~~---~~~~~~------~~~~~--   64 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKPFS--PAQAQKT--FPMAAEQAM---TELGIA------ASEFD--   64 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCCCC--HHHHHHH--TTSCHHHHH---HHTTCC------GGGHH--
T ss_pred             CCCcEEEEeCCCCcCcCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH--hcchhhhhh---hccccc------hhhHH--
Confidence            56899999999999999996 88899999999988754  3444443  444443332   233222      11112  


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                        .+...+.+.+.+...  ..+++||+.++|+.|++ +++++|+||+....++..++++|+.++|+  .++++++.+..|
T Consensus        65 --~~~~~~~~~~~~~~~--~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~K  137 (207)
T d2hdoa1          65 --HFQAQYEDVMASHYD--QIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMA--VTISADDTPKRK  137 (207)
T ss_dssp             --HHHHHHHHHHTTCGG--GCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEE--EEECGGGSSCCT
T ss_pred             --HHHHHhhhhhccccc--ccccccchhhhhhhhcc-ccccccccccccccccccccccccccccc--ccccccccccch
Confidence              222223333333222  36799999999999975 69999999999999999999999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     ..+++++|++|++|+||
T Consensus       138 P~p~~~-----~~~~~~~~~~~~~~l~V  160 (207)
T d2hdoa1         138 PDPLPL-----LTALEKVNVAPQNALFI  160 (207)
T ss_dssp             TSSHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             hhhhhh-----cccccceeeeccceeEe
Confidence            999999     88999999999999986

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.92  E-value=4.8e-25  Score=176.59  Aligned_cols=158  Identities=15%  Similarity=0.215  Sum_probs=117.3

Q ss_pred             cEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHH-HHHhcCCCCCCCCcHHHHHHHHH
Q 024806           78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQFIA  156 (262)
Q Consensus        78 k~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  156 (262)
                      +|+|||+||||+|+.+. +..+|+++++++|++..  .+.+.... .+.+...... .....+.      ..+    ...
T Consensus         2 ~a~iFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~----~~~   67 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIPYD--KEKVREFI-FKYSVQDLLVRVAEDRNL------DVE----VLN   67 (204)
T ss_dssp             CEEEECTBTTTEECHHH-HHHHHHHHHHHHTCCCC--HHHHHHHH-HHSCHHHHHHHHHHHHTC------CHH----HHH
T ss_pred             EEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCCC--HHHHHHhh-cccccccccccccchhhh------hHH----HHH
Confidence            58999999999999986 77899999999988754  34444432 3334333333 3322211      111    111


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCC
Q 024806          157 SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPD  236 (262)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPd  236 (262)
                      .+.   ...+.+.  .....++||+.++|+.|+++|++++|+||+.. .+..+|+++|+.+||+  .|+++++++..||+
T Consensus        68 ~~~---~~~~~~~--~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~--~i~~s~~~~~~Kp~  139 (204)
T d2go7a1          68 QVR---AQSLAEK--NAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT--EILTSQSGFVRKPS  139 (204)
T ss_dssp             HHH---HHHHTTC--GGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEE--EEECGGGCCCCTTS
T ss_pred             HHH---HHHHHhh--cccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccc--cccccccccccchh
Confidence            111   1111111  12367899999999999999999999999885 5677899999999999  89999999999999


Q ss_pred             hHHHhhhhhhhhhhhcccCCcccccC
Q 024806          237 PVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       237 p~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |++|     +.+++.+|++|++|+||
T Consensus       140 ~~~~-----~~~~~~~~~~p~~~l~V  160 (204)
T d2go7a1         140 PEAA-----TYLLDKYQLNSDNTYYI  160 (204)
T ss_dssp             SHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             HHHH-----HHHHHHhCCCCceEEEE
Confidence            9999     88999999999999986

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.92  E-value=7.2e-25  Score=177.31  Aligned_cols=173  Identities=20%  Similarity=0.252  Sum_probs=125.5

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHH-HhcCCCCCCCCcHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERK  152 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  152 (262)
                      |..+|+|+||+||||+|+.+. +..++.++++++|++.. ..+.+...  .+.......... .................
T Consensus         1 M~~~k~iiFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (224)
T d2hsza1           1 MTQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQA-SENLVMTW--IGNGADVLSQRAVDWACKQAEKELTEDEFK   76 (224)
T ss_dssp             CSSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCCC-CHHHHHHH--CSSCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred             CCCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHCCCCCC-cHHHHHHH--hhhhhhhhhhhhhhhhhhhhhhhhhHHHHH
Confidence            567999999999999999986 88899999999998754 34444443  444433322111 10000000011222211


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCC
Q 024806          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (262)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~  232 (262)
                          .........+.+ .......++||+.++|..|+++|++++|+||++...++.+++.+|+.++|+  .++++++.+.
T Consensus        77 ----~~~~~~~~~~~~-~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~  149 (224)
T d2hsza1          77 ----YFKRQFGFYYGE-NLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS--EMLGGQSLPE  149 (224)
T ss_dssp             ----HHHHHHHHHHHH-HTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTTSSS
T ss_pred             ----HHHHHHHHHHHH-hhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcc--cccccccccc
Confidence                111211222222 122357899999999999999999999999999999999999999999999  8999999999


Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .||+|++|     ..+++++|++|++++||
T Consensus       150 ~kp~p~~~-----~~~~~~~~~~~~~~~~i  174 (224)
T d2hsza1         150 IKPHPAPF-----YYLCGKFGLYPKQILFV  174 (224)
T ss_dssp             CTTSSHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             ccccchhh-----HHHHHHhhhhhhccchh
Confidence            99999999     88899999999999986

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.92  E-value=1e-24  Score=180.78  Aligned_cols=168  Identities=15%  Similarity=0.157  Sum_probs=120.6

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHh-----------cCCCCCC
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK-----------TGWPEKA  144 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  144 (262)
                      +||+||||+||||+|+.......++.++++++|+..+  .+++...  .|.........+.+           .+.    
T Consensus         1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~----   72 (257)
T d1swva_           1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAIT--AEEARKP--MGLLKIDHVRALTEMPRIASEWNRVFRQ----   72 (257)
T ss_dssp             CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCC--HHHHHTT--TTSCHHHHHHHHHHSHHHHHHHHHHHSS----
T ss_pred             CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCC--HHHHHHH--hCCcHHHHHHHHhhhhhhhHHHHHHhcc----
Confidence            4899999999999999775456789999999987754  3444332  23222211111100           010    


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceE
Q 024806          145 PSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI  224 (262)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~I  224 (262)
                      ......    ...+.....+.+...... ...++||+.++|+.|+++|++++|+||+++..++.+++.+|+.++|.+ .+
T Consensus        73 ~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d-~~  146 (257)
T d1swva_          73 LPTEAD----IQEMYEEFEEILFAILPR-YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD-FL  146 (257)
T ss_dssp             CCCHHH----HHHHHHHHHHHHHHHGGG-GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS-CC
T ss_pred             cCCHHH----HHHHHHHHHHHHHHHhhc-cCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccc-cc
Confidence            012222    222333333444443332 368999999999999999999999999999999999999999998832 78


Q ss_pred             EeCCCCCCCCCChHHHhhhhhhhhhhhcccCC-cccccC
Q 024806          225 FAGDVVPRKKPDPVKICSLTVDIVCNVLKTHA-HKNVLV  262 (262)
Q Consensus       225 v~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p-~e~v~I  262 (262)
                      +++++++..||+|++|     ..+++++|+.| ++||||
T Consensus       147 ~~~d~~~~~KP~p~~~-----~~~~~~l~~~p~~~~v~V  180 (257)
T d1swva_         147 VTPDDVPAGRPYPWMC-----YKNAMELGVYPMNHMIKV  180 (257)
T ss_dssp             BCGGGSSCCTTSSHHH-----HHHHHHHTCCSGGGEEEE
T ss_pred             cccccccccccChHHH-----HHHHHHhCCCCcceEEEE
Confidence            9999999999999999     88999999965 888886

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.91  E-value=8.1e-25  Score=177.15  Aligned_cols=167  Identities=20%  Similarity=0.231  Sum_probs=125.1

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (262)
                      |||+||||+||||+|+... +..+|.++++++|+.... .+....+  .+.+.......+.+...   .........   
T Consensus         1 MikaiiFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~---   70 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEY-HFRAWKALAEEIGINGVD-RQFNEQL--KGVSREDSLQKILDLAD---KKVSAEEFK---   70 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCCCC-HHHHTTT--TTCCHHHHHHHHHTTSS---SCCCHHHHH---
T ss_pred             CCcEEEEcCCCCeEcCHHH-HHHHHHHHHHHcCCCCCh-HHHHHHH--hhccchhhhhhcccccc---ccchhhhhh---
Confidence            7999999999999999885 888999999999887543 2332222  34454444444432211   112333333   


Q ss_pred             HHHHHHHHHHHHHHHHh-cCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          156 ASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       156 ~~~~~~~~~~~~~~~~~-~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                       .+.+...+.|.+.+.. ...+++||+.++|+.|+++|++++++||+.  .....++.+++.++|+  .++++++.+.+|
T Consensus        71 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~~~l~~~f~--~i~~~~~~~~~K  145 (221)
T d1o08a_          71 -ELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLERMNLTGYFD--AIADPAEVAASK  145 (221)
T ss_dssp             -HHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHTTCGGGCS--EECCTTTSSSCT
T ss_pred             -hHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecc--hhhHHHHhhccccccc--cccccccccccc
Confidence             3333344445444432 235689999999999999999999999986  4688999999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     +.+++++|++|++||||
T Consensus       146 P~~~~~-----~~~l~~~~i~~~~~l~V  168 (221)
T d1o08a_         146 PAPDIF-----IAAAHAVGVAPSESIGL  168 (221)
T ss_dssp             TSTHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             cChHHH-----HHHHHHcCCCCceEEEE
Confidence            999999     88999999999999986

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.91  E-value=3.5e-24  Score=169.62  Aligned_cols=155  Identities=14%  Similarity=0.166  Sum_probs=115.2

Q ss_pred             CCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      |.+|+||||+||||+|+... +..+|.++++.+|+..+  .+.+...  .+.......+.+...        .+    .+
T Consensus         1 M~~k~viFD~DGTL~dt~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~~~~~~~~~~~~~~~--------~~----~~   63 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGITQD--HDSVYQA--LKVSTPFAIETFAPN--------LE----NF   63 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHH--HHHCHHHHHHHHCTT--------CT----TH
T ss_pred             CCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHcCCCcc--HHHHHhh--hhccchhhhhhhhHH--------HH----HH
Confidence            57999999999999999996 88899999999988753  4454444  333333333333211        11    11


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~K  234 (262)
                      .+.+.    +.+....  ....++||+.++|+.|+++|++++|+||++.... ..++.+++.++|+  .++++++++..|
T Consensus        64 ~~~~~----~~~~~~~--~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd--~i~~~~~~~~~K  134 (187)
T d2fi1a1          64 LEKYK----ENEAREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFT--EVVTSSSGFKRK  134 (187)
T ss_dssp             HHHHH----HHHHHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEE--EEECGGGCCCCT
T ss_pred             HHHHH----HHHHHHh--hcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccc--cccccccccccC
Confidence            22222    2222221  2468899999999999999999999999986554 5799999999999  899999999999


Q ss_pred             CChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          235 PDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       235 Pdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |+|++|     +.+++++|+  ++||||
T Consensus       135 P~p~~~-----~~~~~~~~~--~~~l~v  155 (187)
T d2fi1a1         135 PNPESM-----LYLREKYQI--SSGLVI  155 (187)
T ss_dssp             TSCHHH-----HHHHHHTTC--SSEEEE
T ss_pred             CCHHHH-----HHHHHHcCC--CCeEEE
Confidence            999999     888999987  458775

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.6e-22  Score=166.10  Aligned_cols=168  Identities=15%  Similarity=0.167  Sum_probs=112.6

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHH--HHHH----HHhC------CCHHHH-----HHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDL--YGEL----LKIG------GGKERM-----TAYFN  136 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~--~~~~----~~~~------~~~~~~-----~~~~~  136 (262)
                      |..||+|+||+||||+|+... ...++.++++.++.........  +...    ....      ......     ...+.
T Consensus         3 m~~IKaviFD~dGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (247)
T d2gfha1           3 LSRVRAVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQ   81 (247)
T ss_dssp             CCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEcCCCCcCcChHH-HHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHH
Confidence            578999999999999999885 7777777777654333221111  1100    0000      000000     01111


Q ss_pred             hcCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      +.+..   ....        .+.......+...... ...++||+.++|+.|+ +|++++|+||++...++..++.+|+.
T Consensus        82 ~~~~~---~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~  148 (247)
T d2gfha1          82 ETKGG---ADNR--------KLAEECYFLWKSTRLQ-HMILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQ  148 (247)
T ss_dssp             HHHCS---SCCH--------HHHHHHHHHHHHHHHH-TCCCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred             Hhccc---cchH--------HHHHHHHHHHHHhhhc-cCccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhcccc
Confidence            11000   0001        1111111222222222 4789999999999998 57999999999999999999999999


Q ss_pred             CCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          217 ERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       217 ~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ++|+  .++++++++..||+|++|     +.+++++|++|++++||
T Consensus       149 ~~fd--~i~~s~~~~~~KP~p~~~-----~~~~~~~~~~~~~~l~i  187 (247)
T d2gfha1         149 SYFD--AIVIGGEQKEEKPAPSIF-----YHCCDLLGVQPGDCVMV  187 (247)
T ss_dssp             GGCS--EEEEGGGSSSCTTCHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             cccc--ccccccccccchhhhhhH-----HHHHHHhhcCHHhccee
Confidence            9999  899999999999999999     88999999999999986

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.88  E-value=3.4e-22  Score=162.74  Aligned_cols=80  Identities=16%  Similarity=0.151  Sum_probs=76.1

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+ .|++++|+||++...++.+++.+|+.++|+  .++++++++..||+|++|     +.+++++|+
T Consensus        99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~~~~~-----~~~~~~l~~  170 (230)
T d1x42a1          99 GELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFD--SITTSEEAGFFKPHPRIF-----ELALKKAGV  170 (230)
T ss_dssp             CCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCS--EEEEHHHHTBCTTSHHHH-----HHHHHHHTC
T ss_pred             CcccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccc--cccccccccccchhhHHH-----HHHHhhhcc
Confidence            788999999999997 479999999999999999999999999999  899999999999999999     899999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|++|+||
T Consensus       171 ~p~~~l~v  178 (230)
T d1x42a1         171 KGEEAVYV  178 (230)
T ss_dssp             CGGGEEEE
T ss_pred             ccccccee
Confidence            99999986

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.87  E-value=3.5e-22  Score=160.18  Aligned_cols=160  Identities=15%  Similarity=0.162  Sum_probs=119.2

Q ss_pred             CCCCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCcHHHHHH
Q 024806           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (262)
Q Consensus        74 ~~~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (262)
                      |..||+||||+||||+|+... +..++.++++++|++.. +.+.++.+  .+.+........    .      ......+
T Consensus         1 M~~ik~VifD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~-~~~~~~~~--~~~~~~~~~~~~----~------~~~~~~~   66 (210)
T d2ah5a1           1 MTSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPSP-DAKTIRGF--MGPPLESSFATC----L------SKDQISE   66 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCCC-CHHHHHHT--SSSCHHHHHHTT----S------CGGGHHH
T ss_pred             CCCCCEEEEeCCCccccCHHH-HHHHHHHHHHHCCCCCC-CHHHHHHh--hhcchhhhcccc----c------cchhhHH
Confidence            567999999999999999986 78899999999998754 34555554  454443333221    1      1122222


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      ..+.+...    +.... .....++||+.++|+.|+.+ ++++|+||++...++..++++|+..+|+  .++++++.  .
T Consensus        67 ~~~~~~~~----~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd--~v~~~~~~--~  136 (210)
T d2ah5a1          67 AVQIYRSY----YKAKG-IYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFD--GIYGSSPE--A  136 (210)
T ss_dssp             HHHHHHHH----HHHTG-GGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECSS--C
T ss_pred             HHHHHHHH----HHhhh-hhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhccccccc--cccccccc--c
Confidence            22222222    21111 12467899999999999877 6999999999999999999999999999  88888875  5


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|++|     ..+++++|++|++++||
T Consensus       137 ~~~p~~~-----~~~~~~~~~~~~~~v~V  160 (210)
T d2ah5a1         137 PHKADVI-----HQALQTHQLAPEQAIII  160 (210)
T ss_dssp             CSHHHHH-----HHHHHHTTCCGGGEEEE
T ss_pred             ccccccc-----chhhhhhhcccccceee
Confidence            7888888     88899999999999986

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.86  E-value=5.4e-22  Score=161.26  Aligned_cols=170  Identities=15%  Similarity=0.086  Sum_probs=118.1

Q ss_pred             CcEEEEecCccccccCcchHHHHHHHHHHHc-cCCCCCCHHHHHHHHHhCCC-HHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 024806           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEK-ELGVTWDVDLYGELLKIGGG-KERMTAYFNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        77 ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (262)
                      .|.||||+||||+|+... +..++.+++.+. +.........+     .+.. .......+...++.      .....+.
T Consensus         2 ~klviFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~------~~~~~~~   69 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGSTGSHDF-----SGKMDGAIIYEVLSNVGLE------RAEIADK   69 (228)
T ss_dssp             CEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCCC---CC-----TTCCHHHHHHHHHHTTTCC------HHHHHHH
T ss_pred             ceEEEEeCCCCcccCHHH-HHHHHHHHHHHHcCCCccHHHHHH-----hcCchHHHHHHHHHHhCCC------hHHHHHH
Confidence            478999999999999996 778888877764 44433221111     1222 22234444444322      2222333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCC-CeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G-~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~  233 (262)
                      ++...+.+...+.+........++||+.++|+.|+++| ++++|+||+....++..++.+|+.+||+  .+++++++..+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~~~  147 (228)
T d2hcfa1          70 FDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP--FGAFADDALDR  147 (228)
T ss_dssp             HHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS--CEECTTTCSSG
T ss_pred             HHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccc--ccccccccccc
Confidence            34444444444555444445678999999999999987 8999999999999999999999999999  89999999999


Q ss_pred             CCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          234 KPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       234 KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ||+|.++...  ...+...|++|++|+||
T Consensus       148 k~~p~~~~~~--~~~~~~~~~~p~~~l~V  174 (228)
T d2hcfa1         148 NELPHIALER--ARRMTGANYSPSQIVII  174 (228)
T ss_dssp             GGHHHHHHHH--HHHHHCCCCCGGGEEEE
T ss_pred             cchhHHHHHH--hhhhcccCCChhHheee
Confidence            9999998322  11122238899999986

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.86  E-value=6.3e-22  Score=159.97  Aligned_cols=161  Identities=19%  Similarity=0.226  Sum_probs=117.2

Q ss_pred             CCcEEEEecCccccccCcchHHHHHHHHHHHccCCCCCCHHHHHHHHHhCCCHHHHHHH-HHhcCCCCCCCCcHHHHHHH
Q 024806           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQF  154 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  154 (262)
                      ++|+||||+||||+|+... +..+|.++++++|++.+  .+.+... ..+.....+... ..+.+.+.    ...    +
T Consensus         1 ~~kaviFD~DGtL~dt~~~-~~~a~~~~~~~~g~~~~--~~~~~~~-~~g~~~~~~~~~~~~~~~~~~----~~~----~   68 (222)
T d2fdra1           1 GFDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYPIS--VEEMGER-FAGMTWKNILLQVESEASIPL----SAS----L   68 (222)
T ss_dssp             CCSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCCC--HHHHHHH-HTTCCHHHHHHHHHHHHCCCC----CTH----H
T ss_pred             CceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH-Hhhhccccccccccccccccc----ccc----c
Confidence            4799999999999999986 88899999999988764  3444333 245555555443 44443321    222    2


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC--CCC
Q 024806          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPR  232 (262)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~--~~~  232 (262)
                      .+.+.    ..+...... ...++||+.++|+.|+   .+.+|+||+....+...++.+++.++|+. .++++++  .+.
T Consensus        69 ~~~~~----~~~~~~~~~-~~~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~~~~  139 (222)
T d2fdra1          69 LDKSE----KLLDMRLER-DVKIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAP-HIYSAKDLGADR  139 (222)
T ss_dssp             HHHHH----HHHHHHHHH-HCCBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTT-CEEEHHHHCTTC
T ss_pred             hhHHH----HHHHHHhhh-ccchhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccce-eecccccccccc
Confidence            22222    222222222 3789999999998885   45689999999999999999999999994 3455543  467


Q ss_pred             CCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          233 KKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       233 ~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .||+|++|     ..+++++|++|++|+||
T Consensus       140 ~KP~~~~~-----~~~~~~l~~~p~~~l~v  164 (222)
T d2fdra1         140 VKPKPDIF-----LHGAAQFGVSPDRVVVV  164 (222)
T ss_dssp             CTTSSHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             cccCHHHH-----HHHHHhhCCCCceEEEE
Confidence            89999999     88999999999999986

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.83  E-value=7.7e-22  Score=159.04  Aligned_cols=82  Identities=20%  Similarity=0.228  Sum_probs=78.5

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ...++|++.++++.|+++|++++++||+....++..++..++..+|+  .++++++++..||+|++|     +.+++++|
T Consensus        91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd--~~~~s~~~~~~KP~p~~~-----~~~~~~~g  163 (220)
T d1zrna_          91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPVQVYKPDNRVY-----ELAEQALG  163 (220)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEESGGGTCCTTSHHHH-----HHHHHHHT
T ss_pred             cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccccc--ceeeeeeeeccccHHHHH-----HHHHHHhC
Confidence            36789999999999999999999999999999999999999999999  899999999999999999     88999999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|+||+||
T Consensus       164 ~~p~e~l~V  172 (220)
T d1zrna_         164 LDRSAILFV  172 (220)
T ss_dssp             SCGGGEEEE
T ss_pred             CCCceEEEE
Confidence            999999986

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.83  E-value=3.2e-20  Score=151.64  Aligned_cols=80  Identities=20%  Similarity=0.202  Sum_probs=75.2

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      ...++|++.++|+.|+  |++++++||++...+...++.+++.++|+  .|+++++++..||+|++|     +.+++++|
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd--~v~~s~~~~~~KP~p~~f-----~~a~~~lg  161 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD--AVISVDAKRVFKPHPDSY-----ALVEEVLG  161 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTSHHHH-----HHHHHHHC
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccc--cccccccccccCccHHHH-----HHHHHHhC
Confidence            3688999999999984  68999999999999999999999999999  899999999999999999     88999999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|+||+||
T Consensus       162 ~~p~e~l~V  170 (245)
T d1qq5a_         162 VTPAEVLFV  170 (245)
T ss_dssp             CCGGGEEEE
T ss_pred             CChhhEEEE
Confidence            999999986

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1e-19  Score=145.96  Aligned_cols=81  Identities=12%  Similarity=0.057  Sum_probs=71.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHH----HHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEK----AVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCN  250 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~----~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~  250 (262)
                      ..++||+.++|..|+++|++++++||+...    .........++.++|+  .|+++++++.+||+|++|     +.+++
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd--~i~~s~~~~~~KP~~~~~-----~~~~~  170 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFD--FLIESCQVGMVKPEPQIY-----KFLLD  170 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSS--EEEEHHHHTCCTTCHHHH-----HHHHH
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhcc--EEEeccccccchhHHHHH-----HHHhh
Confidence            678999999999999999999999997543    3344445567889999  899999999999999999     88999


Q ss_pred             hcccCCcccccC
Q 024806          251 VLKTHAHKNVLV  262 (262)
Q Consensus       251 ~lgv~p~e~v~I  262 (262)
                      .+|++|++++||
T Consensus       171 ~~~~~p~e~l~V  182 (225)
T d1zd3a1         171 TLKASPSEVVFL  182 (225)
T ss_dssp             HHTCCGGGEEEE
T ss_pred             hcccCccceeEE
Confidence            999999999986

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.9e-19  Score=146.74  Aligned_cols=82  Identities=12%  Similarity=0.053  Sum_probs=73.5

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhccc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKT  254 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv  254 (262)
                      ..++||+.++|+.|+++|++++|+||++...++..++..++.++|+. .+...++.+..||+|.+|     +.+++++|+
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~KP~p~~~-----~~~~~~~~~  199 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL-VDGHFDTKIGHKVESESY-----RKIADSIGC  199 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG-CSEEECGGGCCTTCHHHH-----HHHHHHHTS
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhh-cceeeccccccCCCcHHH-----HHHHHHhCC
Confidence            57899999999999999999999999999999999999999999984 233345667899999999     889999999


Q ss_pred             CCcccccC
Q 024806          255 HAHKNVLV  262 (262)
Q Consensus       255 ~p~e~v~I  262 (262)
                      +|++|+||
T Consensus       200 ~p~~~l~v  207 (253)
T d1zs9a1         200 STNNILFL  207 (253)
T ss_dssp             CGGGEEEE
T ss_pred             CcCcEEEE
Confidence            99999986

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=1.3e-20  Score=151.79  Aligned_cols=81  Identities=12%  Similarity=0.158  Sum_probs=73.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCC----CHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTS----NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCN  250 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~----~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~  250 (262)
                      ..++||+.++|+.|+++|++++++||+    ........+...++.+|||  .++++++++..||+|++|     ..+++
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd--~i~~s~~~~~~KP~p~~~-----~~~~~  168 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFD--FLIESCQVGMIKPEPQIY-----NFLLD  168 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCS--EEEEHHHHSCCTTCHHHH-----HHHHH
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhc--eeeehhhccCCCCChHHH-----HHHHH
Confidence            678999999999999999999999985    3445666777889999999  899999999999999999     88999


Q ss_pred             hcccCCcccccC
Q 024806          251 VLKTHAHKNVLV  262 (262)
Q Consensus       251 ~lgv~p~e~v~I  262 (262)
                      ++|++|++||||
T Consensus       169 ~~~v~p~~~l~I  180 (222)
T d1cr6a1         169 TLKAKPNEVVFL  180 (222)
T ss_dssp             HHTSCTTSEEEE
T ss_pred             HhCCCcceEEEE
Confidence            999999999986

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=3.9e-18  Score=133.43  Aligned_cols=82  Identities=21%  Similarity=0.246  Sum_probs=74.8

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-cCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhc
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVL  252 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~-~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~l  252 (262)
                      ...+++|+.+++..++.+|++++++||+........+..+ ++.++|+  .++++++.+..||+|++|     +.+++.+
T Consensus        82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~Kp~~~~~-----~~~~~~~  154 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAAD--HIYLSQDLGMRKPEARIY-----QHVLQAE  154 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCS--EEEEHHHHTCCTTCHHHH-----HHHHHHH
T ss_pred             ccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhcc--ceeecccccccccchHHH-----HHHHHhc
Confidence            3578999999999999999999999999877777777775 7889999  899999999999999999     8899999


Q ss_pred             ccCCcccccC
Q 024806          253 KTHAHKNVLV  262 (262)
Q Consensus       253 gv~p~e~v~I  262 (262)
                      |++|++|+||
T Consensus       155 ~~~~~~~l~v  164 (197)
T d2b0ca1         155 GFSPSDTVFF  164 (197)
T ss_dssp             TCCGGGEEEE
T ss_pred             CCCCCeEEEE
Confidence            9999999986

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=2.8e-17  Score=126.82  Aligned_cols=76  Identities=14%  Similarity=0.131  Sum_probs=66.1

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH-HHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcc
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE-KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLK  253 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~-~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lg  253 (262)
                      +.++||+.++|+.|+++|++++|+||+++ ...+..++.+++.++|.  .+..     ..||+|++|     ..+++++|
T Consensus        45 ~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--~~~~-----~~kp~~~~~-----~~~~~~~~  112 (164)
T d1u7pa_          45 IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--QREI-----YPGSKVTHF-----ERLHHKTG  112 (164)
T ss_dssp             ECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--EEEE-----SSSCHHHHH-----HHHHHHHC
T ss_pred             cccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--eeec-----ccCCChHHH-----HHHHHHhC
Confidence            67999999999999999999999998865 45667789999998997  5543     358999999     78899999


Q ss_pred             cCCcccccC
Q 024806          254 THAHKNVLV  262 (262)
Q Consensus       254 v~p~e~v~I  262 (262)
                      ++|++||||
T Consensus       113 ~~~~~~l~i  121 (164)
T d1u7pa_         113 VPFSQMVFF  121 (164)
T ss_dssp             CCGGGEEEE
T ss_pred             CChHHEEEE
Confidence            999999986

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.55  E-value=6.7e-15  Score=117.61  Aligned_cols=76  Identities=14%  Similarity=0.145  Sum_probs=58.3

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHH-----------HHHhcCCCCcccceEEeCCCCCCCCCChHHHhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAI-----------VSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSL  243 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~-----------L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~  243 (262)
                      ..+++++.+++.    .+.++++.|+........+           ++.+++.++|+  .|+++++. ..||+|++|   
T Consensus        96 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd--~v~~~~~~-~~KP~p~~f---  165 (225)
T d2g80a1          96 APVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID--GYFDINTS-GKKTETQSY---  165 (225)
T ss_dssp             BCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCC--EEECHHHH-CCTTCHHHH---
T ss_pred             ccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccc--eeeecccc-CCCCChhHh---
Confidence            345666665544    4578899999876554443           34568889999  78887654 479999999   


Q ss_pred             hhhhhhhhcccCCcccccC
Q 024806          244 TVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       244 ~~~~a~~~lgv~p~e~v~I  262 (262)
                        ..+++++|++|++|+||
T Consensus       166 --~~~~~~lg~~p~e~l~V  182 (225)
T d2g80a1         166 --ANILRDIGAKASEVLFL  182 (225)
T ss_dssp             --HHHHHHHTCCGGGEEEE
T ss_pred             --HHHHHhcccCchhceee
Confidence              88999999999999986

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=3.1e-15  Score=114.74  Aligned_cols=81  Identities=12%  Similarity=0.119  Sum_probs=58.9

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC---------------HHHHHHHHHHhcCCC---CcccceEEeCCCCCCCCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPE---RAEKIQIFAGDVVPRKKPD  236 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~---------------~~~~~~~L~~~~l~~---~f~~~~Iv~s~~~~~~KPd  236 (262)
                      +.++||+.++|+.|+++|++++|+||.+               ...+...+...|+..   +|.  ..+..++...+||+
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~--~~~~~~~~~~~KP~  106 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLIC--PHLPADECDCRKPK  106 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEE--CCCGGGCCSSSTTS
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeec--cccccccccccccc
Confidence            5789999999999999999999999975               123345555555532   232  22444567788999


Q ss_pred             hHHHhhhhhhhhhhhcccCCcccccC
Q 024806          237 PVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       237 p~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      |.++     ..+++.+|++|++|+||
T Consensus       107 p~~~-----~~~~~~~~id~~~~~~I  127 (161)
T d2fpwa1         107 VKLV-----ERYLAEQAMDRANSYVI  127 (161)
T ss_dssp             SGGG-----GGGC----CCGGGCEEE
T ss_pred             cHHH-----HHHHHhcCCChhcEEEE
Confidence            9999     88899999999999997

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.48  E-value=1.2e-13  Score=110.82  Aligned_cols=83  Identities=12%  Similarity=0.043  Sum_probs=65.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEE-eCCC----------CCCCCCChHHHhhh
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF-AGDV----------VPRKKPDPVKICSL  243 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv-~s~~----------~~~~KPdp~~~~~~  243 (262)
                      .+++||+.++|+.|+++|++++|+||+.+..++.+++++|+.++|...... ..+.          ....||.|...   
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~---  150 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK---  150 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH---
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHH---
Confidence            789999999999999999999999999999999999999888877321111 1111          12345666666   


Q ss_pred             hhhhhhhhcccCCcccccC
Q 024806          244 TVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       244 ~~~~a~~~lgv~p~e~v~I  262 (262)
                        ..+++.+++.|++++||
T Consensus       151 --~~~~~~~~~~~~~~i~i  167 (226)
T d2feaa1         151 --PSVIHELSEPNQYIIMI  167 (226)
T ss_dssp             --HHHHHHHCCTTCEEEEE
T ss_pred             --HHHHHHhcCCCceEEEE
Confidence              67899999999999886

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=2e-13  Score=109.50  Aligned_cols=45  Identities=27%  Similarity=0.315  Sum_probs=41.9

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCC
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER  218 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~  218 (262)
                      ...++||+.++++.|+++|++++|+|++....++.+++.+|+..+
T Consensus        80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~  124 (217)
T d1nnla_          80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT  124 (217)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG
T ss_pred             ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc
Confidence            477999999999999999999999999999999999999998753

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.38  E-value=5.9e-13  Score=106.13  Aligned_cols=79  Identities=20%  Similarity=0.254  Sum_probs=57.5

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC---------------HHHHHHHHHHhcCCCCcccceEEeC------------
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQIFAG------------  227 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~---------------~~~~~~~L~~~~l~~~f~~~~Iv~s------------  227 (262)
                      +.++||+.++|+.|+++|++++|+||.+               ...+...++..|+  +++  .++..            
T Consensus        47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~--~~~--~~~~~~~~~~~~~~~~~  122 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV--FVD--MVLACAYHEAGVGPLAI  122 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC--CCS--EEEEECCCTTCCSTTCC
T ss_pred             eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhccc--ccc--eEEEecccccccccccc
Confidence            5689999999999999999999999954               1223333444433  233  22222            


Q ss_pred             CCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          228 DVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       228 ~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .+...+||+|.++     ..+++.+|++|++|+||
T Consensus       123 ~~~~~rKP~p~ml-----~~a~~~~~i~~~~~~~V  152 (209)
T d2o2xa1         123 PDHPMRKPNPGML-----VEAGKRLALDLQRSLIV  152 (209)
T ss_dssp             SSCTTSTTSCHHH-----HHHHHHHTCCGGGCEEE
T ss_pred             cccccccccchhh-----hHhHHHhCCCccceEEe
Confidence            1234579999999     88899999999999987

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.35  E-value=2.3e-12  Score=100.40  Aligned_cols=80  Identities=13%  Similarity=0.125  Sum_probs=59.1

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH---------------HHHHHHHHHhcCCCCcccceEEeC-----------C
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG-----------D  228 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---------------~~~~~~L~~~~l~~~f~~~~Iv~s-----------~  228 (262)
                      +.++||+.++|+.|+++|++++|+||.+.               ......+...++ ...+  ..++.           +
T Consensus        26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~cp~~p~~~~~~~~~  102 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDV-DLDG--IYYCPHHPQGSVEEFRQ  102 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTC-CCSE--EEEECCBTTCSSGGGBS
T ss_pred             eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcc-cccc--eeecccccccccccccc
Confidence            56889999999999999999999999863               122223333333 2222  23332           3


Q ss_pred             CCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          229 VVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       229 ~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      +...+||+|.++     ..++++++++|++++||
T Consensus       103 ~~~~rKP~p~m~-----~~~~~~~~i~~~~s~mV  131 (182)
T d2gmwa1         103 VCDCRKPHPGML-----LSARDYLHIDMAASYMV  131 (182)
T ss_dssp             CCSSSTTSCHHH-----HHHHHHHTBCGGGCEEE
T ss_pred             cccccCCccccc-----cchhhhccccccccccc
Confidence            356789999999     88999999999999987

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.34  E-value=2.1e-13  Score=118.46  Aligned_cols=87  Identities=14%  Similarity=0.030  Sum_probs=70.8

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC-----------CCCCCCChHHHhhhh
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV-----------VPRKKPDPVKICSLT  244 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~-----------~~~~KPdp~~~~~~~  244 (262)
                      .++||+.++|+.|+++|++++++||.+...++..++.+|+.++|+...++++++           ....||+|++|+.+.
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~  294 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL  294 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHH
Confidence            356799999999999999999999999999999999999999998666776554           367899999995432


Q ss_pred             hh---------hhhhhcccCCcccccC
Q 024806          245 VD---------IVCNVLKTHAHKNVLV  262 (262)
Q Consensus       245 ~~---------~a~~~lgv~p~e~v~I  262 (262)
                      +.         .+++.++++|++|+||
T Consensus       295 ~~~~~~~~~k~~iv~~~~~~~~~~~~v  321 (380)
T d1qyia_         295 YGNNRDKYESYINKQDNIVNKDDVFIV  321 (380)
T ss_dssp             HCCCGGGHHHHHHCCTTCSCTTTEEEE
T ss_pred             HHcCCCHHHHHHHHHHhCCCCCeEEEE
Confidence            21         1235567788888875

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.11  E-value=8e-11  Score=92.16  Aligned_cols=82  Identities=17%  Similarity=0.104  Sum_probs=65.9

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC----------CCCCCCChHHHhhh
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV----------VPRKKPDPVKICSL  243 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~----------~~~~KPdp~~~~~~  243 (262)
                      ...+++|+.++++.++.+|+.++++|+.....+....+..+...++.  ..+..++          ....++.+...   
T Consensus        73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  147 (210)
T d1j97a_          73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA--NRLIVKDGKLTGDVEGEVLKENAKGEIL---  147 (210)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEETTEEEEEEECSSCSTTHHHHHH---
T ss_pred             hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh--hhhccccccccccccccccccccccchh---
Confidence            36899999999999999999999999999999999999998888876  3333322          23345556666   


Q ss_pred             hhhhhhhhcccCCcccccC
Q 024806          244 TVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       244 ~~~~a~~~lgv~p~e~v~I  262 (262)
                        ...++.+++.|+++++|
T Consensus       148 --~~~~~~~~~~~~~~i~i  164 (210)
T d1j97a_         148 --EKIAKIEGINLEDTVAV  164 (210)
T ss_dssp             --HHHHHHHTCCGGGEEEE
T ss_pred             --hhHHHHhcccccceEEe
Confidence              77899999999999875

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.07  E-value=3.2e-13  Score=110.55  Aligned_cols=63  Identities=16%  Similarity=0.101  Sum_probs=41.2

Q ss_pred             CeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          193 VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       193 ~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ....++++.........+....+..+|+  .+...+.....||+|.+|     +.+++++|++|+|++||
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~KP~p~~~-----~~a~~~lgi~p~e~v~I  199 (250)
T d2c4na1         137 GARFIATNPDTHGRGFYPACGALCAGIE--KISGRKPFYVGKPSPWII-----RAALNKMQAHSEETVIV  199 (250)
T ss_dssp             TCEEEESCCCSBSSTTCBCHHHHHHHHH--HHHCCCCEECSTTSTHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             cccccccccccccCceeecCcchHHHHH--HhhcccchhcccchhhhH-----hhhhhhhcCCchheEEe
Confidence            4566777765322111111111223444  455556667889999999     88999999999999986

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=98.98  E-value=6.2e-10  Score=90.87  Aligned_cols=27  Identities=19%  Similarity=0.449  Sum_probs=24.7

Q ss_pred             CCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          231 PRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       231 ~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      ...||+|.+|     +.+++++|++|++++||
T Consensus       182 ~~~KP~p~~~-----~~a~~~l~~~~~~~lmV  208 (261)
T d1vjra_         182 IAGKPNPLVV-----DVISEKFGVPKERMAMV  208 (261)
T ss_dssp             ECSTTSTHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             ccCCCcHHHH-----HHHHhhhccCchhccee
Confidence            4579999999     88999999999999987

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.86  E-value=2.1e-09  Score=87.27  Aligned_cols=29  Identities=17%  Similarity=0.220  Sum_probs=25.6

Q ss_pred             CCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          229 VVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       229 ~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .....||+|.+|     .++++.+|++|++++||
T Consensus       175 ~~~~~KP~~~~~-----~~~~~~~gi~~~~~l~I  203 (253)
T d1yv9a1         175 PVYIGKPKAIIM-----ERAIAHLGVEKEQVIMV  203 (253)
T ss_dssp             CEECSTTSHHHH-----HHHHHHHCSCGGGEEEE
T ss_pred             eeeecccchhHH-----HHHHHHhCCCccceEEe
Confidence            344589999999     88999999999999986

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=98.85  E-value=1.2e-11  Score=101.04  Aligned_cols=75  Identities=12%  Similarity=-0.012  Sum_probs=43.8

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCc
Q 024806          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAI---VSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAH  257 (262)
Q Consensus       181 v~e~L~~L~~~G~~l~IvTn~~~~~~~~~---L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~  257 (262)
                      ....+..+..++....|+||.+.......   ........++.  .....+....+||+|.+|     +.+++++|++|+
T Consensus       126 ~~~~~~~~~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gKP~p~~~-----~~al~~l~i~~~  198 (253)
T d1wvia_         126 EKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLE--KATRVKPIIIGKPEAVIM-----NKALDRLGVKRH  198 (253)
T ss_dssp             HHHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHH--HHHCCCCEECSTTSHHHH-----HHHHHHHTSCGG
T ss_pred             HHHHHHhhhhhhccccccCCCCceeEcCCcccccCCcchhccc--ccccceeEEeccCCcccc-----eehhhhcccccc
Confidence            33444445556677889999753211100   00000111122  122333344569999999     889999999999


Q ss_pred             ccccC
Q 024806          258 KNVLV  262 (262)
Q Consensus       258 e~v~I  262 (262)
                      +|+||
T Consensus       199 ~~~mI  203 (253)
T d1wvia_         199 EAIMV  203 (253)
T ss_dssp             GEEEE
T ss_pred             ceEEE
Confidence            99997

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.78  E-value=6.1e-10  Score=83.08  Aligned_cols=28  Identities=21%  Similarity=0.188  Sum_probs=26.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN  202 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~  202 (262)
                      ..++||+.++|+.|+++|++++++||.+
T Consensus        35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~   62 (149)
T d1ltqa1          35 DVINPMVVELSKMYALMGYQIVVVSGRE   62 (149)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CccCHHHHHHHHHHHhccCeEEEEecCc
Confidence            4689999999999999999999999986

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=9.6e-08  Score=74.18  Aligned_cols=77  Identities=19%  Similarity=0.236  Sum_probs=57.5

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCC--------HH----HHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhh
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSN--------EK----AVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLT  244 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~--------~~----~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~  244 (262)
                      ++|++.+.|+.|.++|+.+.|+||.+        .+    ....+++.++..  +.  ..++......+||.|-++    
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~--i~~~~~~~~~RKP~~GM~----  122 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQ--VLVATHAGLNRKPVSGMW----  122 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CE--EEEECSSSSSSTTSTHHH----
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--cc--EEEecCccccCCCccHHH----
Confidence            47999999999999999999999963        22    244556666543  33  455556667899999999    


Q ss_pred             hhhhhhhc----ccCCcccccC
Q 024806          245 VDIVCNVL----KTHAHKNVLV  262 (262)
Q Consensus       245 ~~~a~~~l----gv~p~e~v~I  262 (262)
                       +.+++.+    +++.++++||
T Consensus       123 -~~~~~~~n~~~~id~~~S~~I  143 (195)
T d1yj5a1         123 -DHLQEQANEGIPISVEDSVFV  143 (195)
T ss_dssp             -HHHHHTSSSSCCCCGGGCEEE
T ss_pred             -HHHHHHhcccccCCcCceEEE
Confidence             6666665    4778888875

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.50  E-value=9.3e-08  Score=73.91  Aligned_cols=83  Identities=11%  Similarity=-0.031  Sum_probs=57.7

Q ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC--CCCCCCChHHHhhhhhhhhhhh
Q 024806          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPRKKPDPVKICSLTVDIVCNV  251 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~--~~~~KPdp~~~~~~~~~~a~~~  251 (262)
                      .....++....+..++ .+++.+++|.+...........++...++.....+....  .....+.+...     ...++.
T Consensus        67 ~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~  140 (206)
T d1rkua_          67 TLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPK-----RQSVIA  140 (206)
T ss_dssp             TCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHH-----HHHHHH
T ss_pred             hccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhH-----HHHHHH
Confidence            4678899988887765 679999999999899999999888777665322222221  11122333333     567889


Q ss_pred             cccCCcccccC
Q 024806          252 LKTHAHKNVLV  262 (262)
Q Consensus       252 lgv~p~e~v~I  262 (262)
                      +|+.++++++|
T Consensus       141 ~~i~~~eviai  151 (206)
T d1rkua_         141 FKSLYYRVIAA  151 (206)
T ss_dssp             HHHTTCEEEEE
T ss_pred             hcccccceEEe
Confidence            99999998864

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.14  E-value=2.8e-06  Score=68.54  Aligned_cols=42  Identities=21%  Similarity=0.252  Sum_probs=34.8

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcc
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~  220 (262)
                      |.+.++|+.|+++|++++++|+.+...+..+++.+++...+.
T Consensus        24 ~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~   65 (271)
T d1rkqa_          24 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGD   65 (271)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTC
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCc
Confidence            334467778899999999999999999999999988766555

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.11  E-value=9.9e-06  Score=66.49  Aligned_cols=49  Identities=10%  Similarity=0.170  Sum_probs=43.0

Q ss_pred             HHHhcCCCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          169 LIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       169 ~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .+....+.+.||+.++++.|+++|++++|+|++-...++.+++++|+..
T Consensus       128 ~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~  176 (291)
T d2bdua1         128 IVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYH  176 (291)
T ss_dssp             HHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCB
T ss_pred             HHHhcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCc
Confidence            3334458899999999999999999999999999999999999997653

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.84  E-value=1.1e-05  Score=63.18  Aligned_cols=35  Identities=29%  Similarity=0.197  Sum_probs=21.8

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +.|+.|++.|++++++|+.+...+....+.+++..
T Consensus        27 ~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~   61 (225)
T d1l6ra_          27 ESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   61 (225)
T ss_dssp             HHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc
Confidence            44555666677777777776666666666665533

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.81  E-value=2.4e-05  Score=60.82  Aligned_cols=35  Identities=11%  Similarity=0.126  Sum_probs=22.7

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      ++|+.|+++|++++++|+.+...+...+...++..
T Consensus        26 ~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~   60 (230)
T d1wr8a_          26 EAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG   60 (230)
T ss_dssp             HHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCc
Confidence            44455666777777777777666666666665543

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.71  E-value=3e-05  Score=60.89  Aligned_cols=35  Identities=11%  Similarity=0.082  Sum_probs=30.5

Q ss_pred             HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       183 e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      +.|+.|+++|++++++|+.+...+..+++.+++..
T Consensus        24 ~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~   58 (243)
T d1wzca1          24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET   58 (243)
T ss_dssp             HHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence            55677788999999999999999999999997754

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.69  E-value=3.4e-05  Score=62.28  Aligned_cols=38  Identities=21%  Similarity=0.150  Sum_probs=30.7

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCC
Q 024806          180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (262)
Q Consensus       180 gv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~  217 (262)
                      .+.+.|+.|+++|++++++|+.+...+...++.+++..
T Consensus        22 ~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~   59 (285)
T d1nrwa_          22 ENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT   59 (285)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCc
Confidence            34466777888999999999999888888888887654

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=4.7e-05  Score=58.42  Aligned_cols=29  Identities=17%  Similarity=0.322  Sum_probs=24.6

Q ss_pred             CCCCCccHHHHHHHHHHCC-CeEEEEeCCC
Q 024806          174 LLPLRPGVAKLIDQALEKG-VKVAVCSTSN  202 (262)
Q Consensus       174 ~~~~~pgv~e~L~~L~~~G-~~l~IvTn~~  202 (262)
                      .++++||+.++|+.|++.| +.+.++|...
T Consensus        72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~  101 (195)
T d1q92a_          72 ELEPLPGAVEAVKEMASLQNTDVFICTSPI  101 (195)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred             hCCcccCHHHHHHHHhhccCccceEEcccc
Confidence            4799999999999999865 4688888875

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=0.00014  Score=56.16  Aligned_cols=55  Identities=20%  Similarity=0.237  Sum_probs=37.4

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHH-HHhcCCCCcccceEEeCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIV-SFLLGPERAEKIQIFAGDV  229 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~---~~~~~~L-~~~~l~~~f~~~~Iv~s~~  229 (262)
                      ..+.||+.++++.++++|+++..|||...   +.....| +.+|+...-....++..++
T Consensus        85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~  143 (209)
T d2b82a1          85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK  143 (209)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC
T ss_pred             cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC
Confidence            45789999999999999999999999853   3344444 4466643322214555443

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.55  E-value=0.00024  Score=50.30  Aligned_cols=49  Identities=14%  Similarity=0.194  Sum_probs=38.8

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCC---------------HHHHHHHHHHhcCCCCcccceEEeC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~---------------~~~~~~~L~~~~l~~~f~~~~Iv~s  227 (262)
                      ..|.+++.+.|+.|++.|+++.|.|...               .......|+..|+ +| |  .++.+
T Consensus        23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI-~Y-d--~Li~g   86 (124)
T d1xpja_          23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQV-PY-D--EILVG   86 (124)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTC-CC-S--EEEEC
T ss_pred             cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCC-Cc-e--EEEEC
Confidence            3578999999999999999999999984               3557778888877 44 6  55553

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.00016  Score=56.01  Aligned_cols=39  Identities=18%  Similarity=0.157  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       181 v~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      +.++|+.|+++|++++++|+.+...+...++.+++..++
T Consensus        26 ~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~   64 (232)
T d1xvia_          26 AAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLP   64 (232)
T ss_dssp             THHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSC
T ss_pred             HHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCCce
Confidence            446778888999999999999999999999998775443

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=4.7e-05  Score=60.98  Aligned_cols=36  Identities=14%  Similarity=0.150  Sum_probs=25.9

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCC
Q 024806          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (262)
Q Consensus       181 v~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~  216 (262)
                      +.++|+.|+++|++++++|+.+...+...++.++..
T Consensus        25 ~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~   60 (269)
T d1rlma_          25 FMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDE   60 (269)
T ss_dssp             HHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTT
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcc
Confidence            445666777788888888888877777766666543

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.25  E-value=0.0002  Score=57.28  Aligned_cols=37  Identities=19%  Similarity=0.244  Sum_probs=29.5

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcC
Q 024806          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (262)
Q Consensus       179 pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l  215 (262)
                      |.+.+.|+.|+++|++++++|+.+...+...++.+++
T Consensus        31 ~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~   67 (283)
T d2b30a1          31 SENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENL   67 (283)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence            3445677788889999999999998888888776643

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.00  E-value=0.00023  Score=56.62  Aligned_cols=30  Identities=13%  Similarity=0.321  Sum_probs=21.7

Q ss_pred             HHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Q 024806          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVS  211 (262)
Q Consensus       182 ~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~  211 (262)
                      .+.|+.|+++|++++++|+.+...+..+.+
T Consensus        25 ~~al~~l~~~gi~v~~~TGR~~~~~~~l~~   54 (260)
T d2rbka1          25 IEALEAAHAKGLKIFIATGRPKAIINNLSE   54 (260)
T ss_dssp             HHHHHHHHHTTCEEEEECSSCGGGCCSCHH
T ss_pred             HHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence            366677788899999999887665554433

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=96.98  E-value=0.0025  Score=54.66  Aligned_cols=52  Identities=10%  Similarity=0.047  Sum_probs=43.2

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---------cCCCCcccceEEeCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---------LGPERAEKIQIFAGD  228 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~---------~l~~~f~~~~Iv~s~  228 (262)
                      +...|.+..+|..|++.|-++.++||++-..+...++.+         .+.++||  .||+..
T Consensus       184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFD--vVIv~A  244 (458)
T d2bdea1         184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFE--FVITLA  244 (458)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEE--EEEESC
T ss_pred             hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhce--EEEeCC
Confidence            345789999999999999999999999999988888764         4556999  777754

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.00067  Score=52.48  Aligned_cols=20  Identities=35%  Similarity=0.551  Sum_probs=16.5

Q ss_pred             CCCcEEEEecCccccccCcc
Q 024806           75 VLPSALLFDCDGVLVDTEKD   94 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~~~~   94 (262)
                      +++|.++||+||||++....
T Consensus         1 ~~~kl~~fDlDGTLl~~~~~   20 (243)
T d2amya1           1 PGPALCLFDVDGTLTAPRQK   20 (243)
T ss_dssp             CCSEEEEEESBTTTBCTTSC
T ss_pred             CCCEEEEEcCcCCeeCCCCc
Confidence            35789999999999986654

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.05  E-value=0.0042  Score=44.35  Aligned_cols=44  Identities=18%  Similarity=0.147  Sum_probs=39.7

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      ++.|++.+.++.|++.|+++.++|+-....+..+-+.+|+..+|
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~   64 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI   64 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhc
Confidence            47899999999999999999999999999999999999885444

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=95.90  E-value=0.0017  Score=51.51  Aligned_cols=19  Identities=26%  Similarity=0.604  Sum_probs=16.6

Q ss_pred             CCcEEEEecCccccccCcc
Q 024806           76 LPSALLFDCDGVLVDTEKD   94 (262)
Q Consensus        76 ~ik~viFD~DGTL~d~~~~   94 (262)
                      |+|.++||+||||++....
T Consensus         1 m~Kli~~DlDGTL~~~~~~   19 (267)
T d1nf2a_           1 MYRVFVFDLDGTLLNDNLE   19 (267)
T ss_dssp             CBCEEEEECCCCCSCTTSC
T ss_pred             CeEEEEEeCCccccCCcCc
Confidence            6899999999999987653

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.62  E-value=0.0082  Score=46.58  Aligned_cols=36  Identities=6%  Similarity=-0.046  Sum_probs=27.4

Q ss_pred             HHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeC
Q 024806          189 LEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (262)
Q Consensus       189 ~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s  227 (262)
                      +++|+.++++|+.+...+...++.+++.. ++  .+++.
T Consensus        31 ~~~g~~v~i~TGR~~~~~~~~~~~~~~~~-~~--~~i~~   66 (244)
T d1s2oa1          31 RRGNFYLAYATGRSYHSARELQKQVGLME-PD--YWLTA   66 (244)
T ss_dssp             TGGGEEEEEECSSCHHHHHHHHHHHTCCC-CS--EEEET
T ss_pred             HcCCCEEEEECCCCHHHHHHHHHHcCCCC-Cc--eEEec
Confidence            45789999999999999999999887643 33  44444

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.46  E-value=0.0084  Score=45.74  Aligned_cols=27  Identities=22%  Similarity=0.343  Sum_probs=16.9

Q ss_pred             EEEEecCccccccCcchHHHHHHHHHHH
Q 024806           79 ALLFDCDGVLVDTEKDGHRISFNDTFKE  106 (262)
Q Consensus        79 ~viFD~DGTL~d~~~~~~~~a~~~~~~~  106 (262)
                      .++||+||||++.... ......+++++
T Consensus         3 i~lFDlDGTLl~~~~~-is~~~~~~i~~   29 (244)
T d2fuea1           3 LCLFDVDGTLTPARQK-IDPEVAAFLQK   29 (244)
T ss_dssp             EEEEESBTTTBSTTSC-CCHHHHHHHHH
T ss_pred             EEEEccccCccCCCCc-CCHHHHHHHHH
Confidence            3558999999987754 32334444443

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.00  E-value=0.048  Score=40.04  Aligned_cols=44  Identities=20%  Similarity=0.190  Sum_probs=40.1

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCc
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f  219 (262)
                      ++.|++.++|+.|++.|+++.++|+-....+..+-+.+|+...-
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~   63 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGEN   63 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTT
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCc
Confidence            57899999999999999999999999999999999999886543

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.025  Score=42.17  Aligned_cols=52  Identities=13%  Similarity=0.101  Sum_probs=44.0

Q ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCC
Q 024806          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV  229 (262)
Q Consensus       175 ~~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~  229 (262)
                      ....||+.++|+.+.+. +.++|-|.+.+..++.+++.+.-...|.  ..+..+.
T Consensus        54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~--~~~~r~~  105 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFR--ARLFRES  105 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEE--EEECGGG
T ss_pred             EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCcee--EEEEeee
Confidence            45789999999999988 9999999999999999999997666666  5555443

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=93.30  E-value=0.062  Score=41.68  Aligned_cols=48  Identities=10%  Similarity=0.195  Sum_probs=36.0

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhcCCCCcccceEEe
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPERAEKIQIFA  226 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~L~~~~l~~~f~~~~Iv~  226 (262)
                      ++|++.++|+.|+++|+++.++||++   +..+...++.+|+.-..+  .|++
T Consensus        20 ~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~~~--~i~~   70 (250)
T d2c4na1          20 AVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDS--VFYT   70 (250)
T ss_dssp             ECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCGG--GEEE
T ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccccce--eEec
Confidence            45889999999999999999999875   455666677777654443  4444

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=92.56  E-value=0.16  Score=35.01  Aligned_cols=62  Identities=6%  Similarity=-0.144  Sum_probs=42.1

Q ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHHhcCCCCcccceEE-------eCCCCCCCCCChHHHh
Q 024806          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA---IVSFLLGPERAEKIQIF-------AGDVVPRKKPDPVKIC  241 (262)
Q Consensus       176 ~~~pgv~e~L~~L~~~G~~l~IvTn~~~~~~~~---~L~~~~l~~~f~~~~Iv-------~s~~~~~~KPdp~~~~  241 (262)
                      .+.|++.++|+.|++.|+.+.+.|.........   .|+..|+ +| +  .+-       .-.++..+||..++|.
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i-~y-d--~i~~~~~~~~~~~~~~~~Kp~ad~yI   92 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL-EF-Y--AANKDYPEEERDHQGFSRKLKADLFI   92 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC-CC-S--EESSSSTTC---CCSCCSSCCCSEEE
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCC-Cc-e--ehhccCccCccccceecCCccccEEE
Confidence            478999999999999999999999997655444   4444433 22 2  221       1123445688888874

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=92.55  E-value=0.072  Score=39.39  Aligned_cols=63  Identities=14%  Similarity=0.013  Sum_probs=48.5

Q ss_pred             HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcCCCCcccceEEeCCCCCCCCCChHHHhhhhhhhhhhhcccCCcccccC
Q 024806          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPVKICSLTVDIVCNVLKTHAHKNVLV  262 (262)
Q Consensus       184 ~L~~L~~~G~~l~IvTn~~~~~~~~~L~~~~l~~~f~~~~Iv~s~~~~~~KPdp~~~~~~~~~~a~~~lgv~p~e~v~I  262 (262)
                      .+..|++.|+.++++|......+....+.+++...+.      +     .++....+     +..++++|+++++++||
T Consensus        40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~~~------~-----~~~K~~~l-----~~~~~~~~i~~~~v~~v  102 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFL------G-----KLEKETAC-----FDLMKQAGVTAEQTAYI  102 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEE------S-----CSCHHHHH-----HHHHHHHTCCGGGEEEE
T ss_pred             HHHHHhhhcEEEEEecCCchhHHHHHHhhhccccccc------c-----cccHHHHH-----HHHHHHhcCCcceeEEe
Confidence            3677888999999999999899999999886654443      1     12334444     67889999999999875

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.28  E-value=0.03  Score=42.21  Aligned_cols=12  Identities=42%  Similarity=0.772  Sum_probs=11.0

Q ss_pred             EEEEecCccccc
Q 024806           79 ALLFDCDGVLVD   90 (262)
Q Consensus        79 ~viFD~DGTL~d   90 (262)
                      .|+||+||||++
T Consensus         2 Li~~DlDGTL~~   13 (229)
T d1u02a_           2 LIFLDYDGTLVP   13 (229)
T ss_dssp             EEEEECBTTTBC
T ss_pred             EEEEEecCCCCC
Confidence            689999999996

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=91.69  E-value=0.031  Score=41.51  Aligned_cols=17  Identities=35%  Similarity=0.388  Sum_probs=14.9

Q ss_pred             CCCcEEEEecCcccccc
Q 024806           75 VLPSALLFDCDGVLVDT   91 (262)
Q Consensus        75 ~~ik~viFD~DGTL~d~   91 (262)
                      ..+|.+|||+||||.|.
T Consensus         3 ~~ik~~i~DvDGVlTDG   19 (177)
T d1k1ea_           3 ENIKFVITDVDGVLTDG   19 (177)
T ss_dssp             GGCCEEEEECTTTTSCS
T ss_pred             ccCeEEEEccCCcccCC
Confidence            35899999999999984

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=88.78  E-value=0.14  Score=39.62  Aligned_cols=49  Identities=10%  Similarity=0.185  Sum_probs=34.3

Q ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHH-hcCCCCcccceEEeC
Q 024806          177 LRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSF-LLGPERAEKIQIFAG  227 (262)
Q Consensus       177 ~~pgv~e~L~~L~~~G~~l~IvTn~~---~~~~~~~L~~-~~l~~~f~~~~Iv~s  227 (262)
                      ++|++.++|+.|+++|++++++||+.   ...+...++. +++....+  .|+++
T Consensus        19 ~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~~--~i~~~   71 (253)
T d1wvia_          19 RIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLE--TIYTA   71 (253)
T ss_dssp             ECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCGG--GEEEH
T ss_pred             cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCcccccc--ccccH
Confidence            46899999999999999999999974   3444455543 34544444  45554

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=86.50  E-value=0.13  Score=35.56  Aligned_cols=14  Identities=29%  Similarity=0.631  Sum_probs=11.6

Q ss_pred             EEEEecCccccccC
Q 024806           79 ALLFDCDGVLVDTE   92 (262)
Q Consensus        79 ~viFD~DGTL~d~~   92 (262)
                      .|+||+||||+...
T Consensus         2 ti~vDiDGTl~~~~   15 (122)
T d2obba1           2 TIAVDFDGTIVEHR   15 (122)
T ss_dssp             EEEECCBTTTBCSC
T ss_pred             EEEEEcCCCcCCCC
Confidence            58999999998643