Citrus Sinensis ID: 024882

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
MATPSTKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVLFYCMVYILCFS
cccccccccccccccEEEEEcccccHHHHHHHHccccccEEEEEEccccccccccccccccccccHHHHHHHHcccccccccccccccEEEEEEEEccEEEEEccccccccccccccHHHHHHHHccEEccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccEEEEccccEEcccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHccEEEcc
cccccccccccccccccEEEEcccccHHHHHHHHHHcccEEEEEEccccHHHccccccccEEEccHcHHHHHccccccccccccccccEEEEEEEcccEEEEEcccccccccccccHHHHHHHHHHHccccccccHHHEccccccccccccccccccccccccEEEEccccccccccccHHEHEccccccccccccEEEEccccEEEccccEHcEcHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcc
matpstkptpllkdeldiviptirnldflemwrpffepyhliivqdgdpsktikvpdgfdyelynrndinrilgpkascisfkdsacrcfgymvskkkyiftidddcfvakdpsgkEINALEQHIKnllspstplffntlydpyregadfvrgypfslregVHTAVSHglwlnipdydaptqlvkprerntryvdavltvpkgtlfpmcgmnlafdreligpamyfglmgdgqpigryddmwaGWCMKVLFYCMVYILCFS
matpstkptpllkdeldiVIPTIRNLDFLEMWRPFFEPYHLIivqdgdpskTIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQlvkprerntryVDAVltvpkgtlfpMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVLFYCMVYILCFS
MATPSTKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVLFYCMVYILCFS
************KDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVLFYCMVYILCF*
************KDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVLFYCMVYILCFS
********TPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVLFYCMVYILCFS
********TPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVLFYCMVYILCFS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHi
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MATPSTKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVLFYCMVYILCFS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query261 2.2.26 [Sep-21-2011]
Q8RU27 366 Alpha-1,4-glucan-protein N/A no 0.957 0.683 0.924 1e-138
Q8H8T0364 UDP-arabinopyranose mutas yes no 0.950 0.681 0.923 1e-138
P80607364 Alpha-1,4-glucan-protein N/A no 0.942 0.675 0.930 1e-137
O04300 364 Alpha-1,4-glucan-protein N/A no 0.934 0.670 0.934 1e-137
Q9SRT9357 UDP-arabinopyranose mutas yes no 0.923 0.675 0.941 1e-136
Q9LFW1360 UDP-arabinopyranose mutas yes no 0.938 0.680 0.918 1e-135
O22666362 UDP-arabinopyranose mutas no no 0.942 0.679 0.914 1e-135
Q9SC19 365 Alpha-1,4-glucan-protein N/A no 0.927 0.663 0.929 1e-134
Q6Z4G3 366 UDP-arabinopyranose mutas no no 0.927 0.661 0.917 1e-134
Q9LUE6 364 Probable UDP-arabinopyran no no 0.915 0.656 0.820 1e-120
>sp|Q8RU27|UPTG2_SOLTU Alpha-1,4-glucan-protein synthase [UDP-forming] 2 OS=Solanum tuberosum GN=UPTG2 PE=1 SV=1 Back     alignment and function desciption
 Score =  489 bits (1260), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 231/250 (92%), Positives = 240/250 (96%)

Query: 1   MATPSTKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFD 60
           MA  S  PTPLLKDELDIVIPTIRNLDFLEMWRPFF+PYHLIIVQDGDPSK I VP+GFD
Sbjct: 1   MAGSSVTPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFD 60

Query: 61  YELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINA 120
           YELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFVAKDPSGK+INA
Sbjct: 61  YELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINA 120

Query: 121 LEQHIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAP 180
           LEQHIKNLL PSTP FFNTLYDPYREGADFVRGYPFS+REG  TAVSHGLWLNIPDYDAP
Sbjct: 121 LEQHIKNLLCPSTPHFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAP 180

Query: 181 TQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDD 240
           TQLVKPRERNTRYVDAV+T+PKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDD
Sbjct: 181 TQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDD 240

Query: 241 MWAGWCMKVL 250
           MWAGWC+KV+
Sbjct: 241 MWAGWCIKVI 250
Possible role in the synthesis of cell wall polysaccharides.
Solanum tuberosum (taxid: 4113)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8H8T0|RGP1_ORYSJ UDP-arabinopyranose mutase 1 OS=Oryza sativa subsp. japonica GN=UAM1 PE=1 SV=1 Back     alignment and function description
>sp|P80607|UPTG_MAIZE Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Zea mays GN=UPTG PE=1 SV=2 Back     alignment and function description
>sp|O04300|UPTG_PEA Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Pisum sativum GN=UPTG PE=1 SV=1 Back     alignment and function description
>sp|Q9SRT9|RGP1_ARATH UDP-arabinopyranose mutase 1 OS=Arabidopsis thaliana GN=RGP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LFW1|RGP2_ARATH UDP-arabinopyranose mutase 2 OS=Arabidopsis thaliana GN=RGP2 PE=1 SV=1 Back     alignment and function description
>sp|O22666|RGP3_ARATH UDP-arabinopyranose mutase 3 OS=Arabidopsis thaliana GN=RGP3 PE=1 SV=2 Back     alignment and function description
>sp|Q9SC19|UPTG1_SOLTU Alpha-1,4-glucan-protein synthase [UDP-forming] 1 OS=Solanum tuberosum GN=UPTG1 PE=1 SV=2 Back     alignment and function description
>sp|Q6Z4G3|RGP3_ORYSJ UDP-arabinopyranose mutase 3 OS=Oryza sativa subsp. japonica GN=UAM3 PE=1 SV=1 Back     alignment and function description
>sp|Q9LUE6|RGP4_ARATH Probable UDP-arabinopyranose mutase 4 OS=Arabidopsis thaliana GN=RGP4 PE=1 SV=1 Back     alignment and function description

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query261
UNIPROTKB|Q8H8T0364 UAM1 "UDP-arabinopyranose muta 0.942 0.675 0.930 2.8e-130
TAIR|locus:2076482357 RGP1 "reversibly glycosylated 0.923 0.675 0.941 1.4e-128
TAIR|locus:2143171360 RGP2 "reversibly glycosylated 0.931 0.675 0.925 3.6e-128
TAIR|locus:2097653362 RGP3 "reversibly glycosylated 0.942 0.679 0.914 1.2e-127
UNIPROTKB|Q6Z4G3 366 UAM3 "UDP-arabinopyranose muta 0.954 0.680 0.895 5.3e-127
TAIR|locus:2163305 364 RGP4 "reversibly glycosylated 0.915 0.656 0.820 2.5e-113
TAIR|locus:2171362348 RGP5 "reversibly glycosylated 0.896 0.672 0.533 6.5e-67
UNIPROTKB|Q7FAY6347 UAM2 "Probable UDP-arabinopyra 0.892 0.671 0.510 7.6e-64
UNIPROTKB|Q8H8T0 UAM1 "UDP-arabinopyranose mutase 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
 Score = 1278 (454.9 bits), Expect = 2.8e-130, P = 2.8e-130
 Identities = 229/246 (93%), Positives = 240/246 (97%)

Query:     5 STKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFDYELY 64
             S   TPLLKDELDIVIPTIRNLDFLEMWRPFF+PYHLIIVQDGDP+KTI+VP+GFDYELY
Sbjct:    11 SVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIRVPEGFDYELY 70

Query:    65 NRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQH 124
             NRNDINRILGPKASCISFKDSACRCFGYMVSKKKY+FTIDDDCFVAKDPSGK+INALEQH
Sbjct:    71 NRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQH 130

Query:   125 IKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQLV 184
             IKNLLSPSTP FFNTLYDPYREGADFVRGYPFSLREG  TAVSHGLWLNIPDYDAPTQ+V
Sbjct:   131 IKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAKTAVSHGLWLNIPDYDAPTQMV 190

Query:   185 KPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAG 244
             KPRERN+RYVDAV+TVPKGTLFPMCGMNLAFDR+LIGPAMYFGLMGDGQPIGRYDDMWAG
Sbjct:   191 KPRERNSRYVDAVMTVPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAG 250

Query:   245 WCMKVL 250
             WCMKV+
Sbjct:   251 WCMKVI 256
GO:0005515 "protein binding" evidence=IPI
GO:0016866 "intramolecular transferase activity" evidence=IDA
TAIR|locus:2076482 RGP1 "reversibly glycosylated polypeptide 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143171 RGP2 "reversibly glycosylated polypeptide 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097653 RGP3 "reversibly glycosylated polypeptide 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6Z4G3 UAM3 "UDP-arabinopyranose mutase 3" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2163305 RGP4 "reversibly glycosylated polypeptide 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171362 RGP5 "reversibly glycosylated polypeptide 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q7FAY6 UAM2 "Probable UDP-arabinopyranose mutase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8H8T0RGP1_ORYSJ5, ., 4, ., 9, 9, ., 3, 00.92330.95010.6813yesno
Q9LFW1RGP2_ARATH5, ., 4, ., 9, 9, ., 3, 00.91830.93860.6805yesno
O22666RGP3_ARATH5, ., 4, ., 9, 9, ., 3, 00.91460.94250.6795nono
Q6Z4G3RGP3_ORYSJ5, ., 4, ., 9, 9, ., 3, 00.91730.92720.6612nono
Q9SC19UPTG1_SOLTU2, ., 4, ., 1, ., -0.92970.92720.6630N/Ano
O04300UPTG_PEA2, ., 4, ., 1, ., -0.93440.93480.6703N/Ano
Q8RU27UPTG2_SOLTU2, ., 4, ., 1, ., -0.9240.95780.6830N/Ano
Q9SRT9RGP1_ARATH5, ., 4, ., 9, 9, ., 3, 00.94190.92330.6750yesno
P80607UPTG_MAIZE2, ., 4, ., 1, ., -0.93080.94250.6758N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00030012001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (361 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query261
PLN03180346 PLN03180, PLN03180, reversibly glycosylated polype 0.0
pfam03214348 pfam03214, RGP, Reversibly glycosylated polypeptid 1e-150
>gnl|CDD|215615 PLN03180, PLN03180, reversibly glycosylated polypeptide; Provisional Back     alignment and domain information 
 Score =  554 bits (1430), Expect = 0.0
 Identities = 231/247 (93%), Positives = 237/247 (95%)

Query: 4   PSTKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFDYEL 63
            S  P PLLKDELDIVIPTIRNLDFLEMWRPFF+PYHLIIVQDGDPSK IKVP+GFDYEL
Sbjct: 1   ASVSPAPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKEIKVPEGFDYEL 60

Query: 64  YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQ 123
           YNRNDINRILGPKASCISFKDSACRCFGY+VSKKKYIFTIDDDCFVAKDPSGK INALEQ
Sbjct: 61  YNRNDINRILGPKASCISFKDSACRCFGYLVSKKKYIFTIDDDCFVAKDPSGKLINALEQ 120

Query: 124 HIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHTAVSHGLWLNIPDYDAPTQL 183
           HIKNLLSPSTP FFNTLYDPYREGADFVRGYPFSLREGV TAVSHGLWLNIPDYDAPTQL
Sbjct: 121 HIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQL 180

Query: 184 VKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWA 243
           VKP ERNTRYVDAV+T+PKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWA
Sbjct: 181 VKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWA 240

Query: 244 GWCMKVL 250
           GWC KV+
Sbjct: 241 GWCAKVI 247

Length = 346
>gnl|CDD|190568 pfam03214, RGP, Reversibly glycosylated polypeptide Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 261
PLN03180346 reversibly glycosylated polypeptide; Provisional 100.0
PF03214348 RGP: Reversibly glycosylated polypeptide; InterPro 100.0
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 98.26
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 98.15
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 98.14
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 98.11
PRK10073328 putative glycosyl transferase; Provisional 98.0
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 97.97
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 97.96
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 97.96
PRK10018279 putative glycosyl transferase; Provisional 97.96
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 97.95
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 97.95
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 97.94
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 97.94
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 97.9
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 97.9
cd06423180 CESA_like CESA_like is the cellulose synthase supe 97.9
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 97.89
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 97.88
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 97.87
cd06442224 DPM1_like DPM1_like represents putative enzymes si 97.86
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 97.84
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 97.8
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 97.75
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 97.72
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 97.71
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 97.68
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 97.68
PRK14583 444 hmsR N-glycosyltransferase; Provisional 97.65
cd06438183 EpsO_like EpsO protein participates in the methano 97.63
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 97.62
PRK11204 420 N-glycosyltransferase; Provisional 97.62
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 97.58
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 97.49
PRK10063248 putative glycosyl transferase; Provisional 97.45
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 97.44
cd04188211 DPG_synthase DPG_synthase is involved in protein N 97.41
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 97.34
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 97.32
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 97.2
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 97.19
COG1215 439 Glycosyltransferases, probably involved in cell wa 97.16
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 97.16
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 97.1
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 96.84
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 96.83
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 96.83
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 96.75
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 96.6
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 95.84
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 95.35
KOG2977323 consensus Glycosyltransferase [General function pr 95.11
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 95.01
COG1216305 Predicted glycosyltransferases [General function p 94.82
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 92.81
PRK14716 504 bacteriophage N4 adsorption protein B; Provisional 90.7
KOG1476330 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQ 89.03
cd00218223 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) 88.02
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 86.29
PRK05454 691 glucosyltransferase MdoH; Provisional 80.24
>PLN03180 reversibly glycosylated polypeptide; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.7e-86  Score=612.71  Aligned_cols=253  Identities=91%  Similarity=1.538  Sum_probs=248.2

Q ss_pred             CCCCCCCCCCCeEEEEecccChhHHHhhhcccCCeEEEEEecCCCCcccccCCCccccccChhhhhhhhCCCccccccCc
Q 024882            5 STKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKASCISFKD   84 (261)
Q Consensus         5 ~~~~~~~~~~~v~IVVtTi~~p~~L~~~~~~~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~dq~~~l~~~~~~lP~~s   84 (261)
                      +..++++++++++||||||++++||++|+++++++|+|+|+|++.+++++.|+|+++++|+++|++++++.+.++|||++
T Consensus         2 ~~~~~~~~~~evdIVi~TI~~~~fL~~~r~~l~~~h~iiV~d~D~~~~~~~~~G~d~~vy~r~d~~~~Lg~~~~~Ip~~~   81 (346)
T PLN03180          2 SVSPAPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKEIKVPEGFDYELYNRNDINRILGPKASCISFKD   81 (346)
T ss_pred             CCccCCCCCCcceEEEeccCchhHHHHHHHhcCcccEEEEecCCcccceeccCCCceeecCHHHHHhhhcccccccccCc
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccceeEEEEeceEEEeecCCCcccCCCCCccchhhhhhhhccccCCCCcccccccccCcCCCCCcCcccCCCCCCccc
Q 024882           85 SACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSPSTPLFFNTLYDPYREGADFVRGYPFSLREGVHT  164 (261)
Q Consensus        85 ~arRN~GYL~A~a~~I~~~DDDn~P~~~~~g~~~d~~~~~~~~l~~~~~~~~~N~ly~~f~~~~~wpRG~P~~~r~g~~~  164 (261)
                      +||||||||+|++|||++|||||.|+++|.|+.+|+++||+.||..|++|+|||+||+||+++++||||||||+|+|+++
T Consensus        82 ~a~R~fGyL~s~~~yivsiDDD~~Pa~d~~g~~i~~~~qH~~NL~~pstp~~fNtLYdp~r~g~~fvRGYPfS~R~gv~v  161 (346)
T PLN03180         82 SACRCFGYLVSKKKYIFTIDDDCFVAKDPSGKLINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGVPT  161 (346)
T ss_pred             ccchhhhheeecceEEEEECCCCCCCCCCccccccHHHHHHHhcCCCCCCceeecccccCccCCcccCCCCccccCCcce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeccccCCCCCcccccccCCCccCcccccceeeCCCCceeeecceechhhhcccchhhhhcccCCCCcccchhhhHHH
Q 024882          165 AVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAG  244 (261)
Q Consensus       165 ~i~qGL~~~~PDvDAi~rl~~~~~~~~~f~~~~v~l~~Gt~~p~nsqNtaf~r~a~~pa~~~~~~~~~~~~~R~~DIWrg  244 (261)
                      +++||||+|+|||||+|||+++.|++++|++++||+|+|||+|+|||||||+||++|||||+.+|++|+.++|++|||+|
T Consensus       162 aiS~GLWln~PD~DA~t~l~k~~e~~t~yvdavvtip~gt~~pv~~~NlAF~ReligPA~y~g~m~~g~~i~R~dDiWsG  241 (346)
T PLN03180        162 AVSHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAG  241 (346)
T ss_pred             EEecccccCCCcccchhhhccchhccceecccEEeccCCCEeecccchhhhhhhhcchhheecccCCCCcccchhhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhheee
Q 024882          245 WCMKVLFYCMVYI  257 (261)
Q Consensus       245 ~~~qri~~~~~~~  257 (261)
                      ||+|++||||.+-
T Consensus       242 ~c~K~i~dhLG~g  254 (346)
T PLN03180        242 WCAKVICDHLGLG  254 (346)
T ss_pred             HHHHHHHHHhCcc
Confidence            9999999999864

>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants [] Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query261
3bcv_A240 Putative glycosyltransferase protein; protein stru 98.41
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 98.34
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 98.15
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 97.92
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 97.92
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 97.85
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 97.83
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 97.73
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 97.7
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 97.69
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 97.68
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 97.5
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 97.36
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 97.02
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 96.03
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 95.56
2d0j_A246 Galactosylgalactosylxylosylprotein 3-beta- glucuro 90.57
1v84_A253 Galactosylgalactosylxylosylprotein 3-beta- glucuro 90.45
3cu0_A281 Galactosylgalactosylxylosylprotein 3-beta- glucuro 89.4
2bo4_A 397 Mannosylglycerate synthase; catalysis, glycosyltra 84.07
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
Probab=98.41  E-value=6e-08  Score=82.01  Aligned_cols=97  Identities=15%  Similarity=0.218  Sum_probs=67.1

Q ss_pred             CCeEEEEecccCh----hHHHhhhcc-cCCeEEEEEecCCCCcccccCCCccccccChhhhhhhh--CCCcccc---ccC
Q 024882           14 DELDIVIPTIRNL----DFLEMWRPF-FEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRIL--GPKASCI---SFK   83 (261)
Q Consensus        14 ~~v~IVVtTi~~p----~~L~~~~~~-~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~dq~~~l--~~~~~~l---P~~   83 (261)
                      -.++|||||+++.    +||+++.+. .+.+|+|||.|....++.+..             +++.  .....++   ..+
T Consensus         5 p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~-------------~~~~~~~~~i~~i~~~n~G   71 (240)
T 3bcv_A            5 PKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKIC-------------DDYAAQYPNIKVIHKKNAG   71 (240)
T ss_dssp             CSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHH-------------HHHHHHCSSEEEEECCCCC
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHH-------------HHHHhhCCCEEEEECCCCC
Confidence            3699999999986    688888765 789999999998322221111             1111  0001111   245


Q ss_pred             cccccceeEEEEeceEEEeecCCCcccCCCCCccchhhhh
Q 024882           84 DSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQ  123 (261)
Q Consensus        84 s~arRN~GYL~A~a~~I~~~DDDn~P~~~~~g~~~d~~~~  123 (261)
                      ..++||.|.-.|.++||+++|+|..+.++++.+.+..+++
T Consensus        72 ~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~  111 (240)
T 3bcv_A           72 LGMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQK  111 (240)
T ss_dssp             HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHh
Confidence            6788999999999999999999999998875555555443
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens} Back     alignment and structure
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A* Back     alignment and structure
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query261
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 98.68
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 98.22
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 98.16
d1v82a_252 Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human ( 92.46
d3cu0a1261 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo 92.19
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.68  E-value=2.7e-09  Score=85.60  Aligned_cols=98  Identities=11%  Similarity=0.172  Sum_probs=63.9

Q ss_pred             CCCeEEEEecccCh----hHHHhhhcc-cCCeEEEEEecCCCCcccccCCCccccccChhhhhhhhCC-Cccc----ccc
Q 024882           13 KDELDIVIPTIRNL----DFLEMWRPF-FEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGP-KASC----ISF   82 (261)
Q Consensus        13 ~~~v~IVVtTi~~p----~~L~~~~~~-~~~~~lVVV~D~~~~~~~ktp~~~~~~~~~~~dq~~~l~~-~~~~----lP~   82 (261)
                      .+.++|||||++++    +||+++.+. .+..++||+.|.      .+.        +.+...+.... ....    =..
T Consensus         2 ~~~~tvii~tyn~~~~l~~~l~sl~~q~~~~~~iiV~d~~------sd~--------~~~~i~~~~~~~~~~~~~~~~~~   67 (265)
T d1omza_           2 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSLHKVIVVWNNV------GEK--------GPEELWNSLGPHPIPVIFKPQTA   67 (265)
T ss_dssp             TTCEEEEEEESSCHHHHHHHHHHHTTSTTEEEEEEEECCT------TCC--------CTHHHHHHTCCCSSCEEEEECSS
T ss_pred             CCcEEEEEEcCCCHHHHHHHHHHHHcCCCcCeEEEEECCC------CCc--------cHHHHHHHhcccceEEEEecCCC
Confidence            46799999999998    588888876 555555444444      221        11222222211 1000    113


Q ss_pred             CcccccceeEEEEeceEEEeecCCCcccCCCCCccchhhhhh
Q 024882           83 KDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQH  124 (261)
Q Consensus        83 ~s~arRN~GYL~A~a~~I~~~DDDn~P~~~~~g~~~d~~~~~  124 (261)
                      +..+++|.|...|.+|||+++|||..+.++++.+.+..++++
T Consensus        68 g~~~a~n~~~~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~  109 (265)
T d1omza_          68 NKMRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQF  109 (265)
T ss_dssp             CCGGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred             CchhhhhhhHHhCCcCEEEEeCcccCCCHHHHHHHHHHHHhC
Confidence            467889999999999999999999999988755555555543
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure