Citrus Sinensis ID: 024886

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
Protein Sequence
MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRILITE
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHcccccccccccccccccccccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccEEEEEEccHHHHHHHHHHccccccccEEEEEcccccccccHHHHHHHHHHcccccccEEEEcccccHHHHHHHHcccEEEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccHHHHHHHccccccHcccccccccccccccccccccccccEEEEEEEccccEccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccEEEEEEcccHHHHHHHHHcccHHHccEEEEEHHcccccccHHHHHHHHHHccccHHHEEEEcccHHHHHHHHHHccccEEEEcccccccHHHcHHEEccc
Coil and Loop (DISEMBL)
meaciskcchgnsllkalkmkplrfnisnrlrcssmplhsgvgksVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKyglnvdsaDIKKGFRkafaapwpeklryegdgrpfWRLVVSEatgctnddYFEEVYEYYAKgeawhlphgayQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVIssevgcekpdprIFKAALDQMSVEASrtvhigddekadkqganslgidcwlwgidvktfsdVQNRILITE
Flexible Loop (DISEMBL)
meaciskcchgnsllkalkMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGfrkafaapwpeklryegdgrpfWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVIssevgcekpdPRIFKAALDQMSVEASRTvhigddekadkqgaNSLGIDCWLWGIDVKTFSDVQNRILITE
Low Complexity Region (SEG)
MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRILITE
Disordered region (IsUnstruct)
***CISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL************************NSLGIDCWLWGIDVKTFSDVQNRILI**
Disordered Region (DISOPRED)
*******CCHGNSLLKALKM******************************DAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRILIT*
Disordered Region (DISEMBL)
MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRILITE
Disordered Region (DISPRO)
*EACISKCCHGNSLLKALKMKPLRFNIS******************KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRILIT*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRILITE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	261	2.2.26 [Sep-21-2011]
Q9CYW4	251	Haloacid dehalogenase-lik	yes	no	0.716	0.745	0.348	2e-24
Q5E9D6	251	Haloacid dehalogenase-lik	yes	no	0.716	0.745	0.328	2e-20
Q9BSH5	251	Haloacid dehalogenase-lik	yes	no	0.716	0.745	0.328	3e-18
Q7T012	242	Haloacid dehalogenase-lik	yes	no	0.727	0.785	0.308	4e-17
Q5HZL9	244	Haloacid dehalogenase-lik	N/A	no	0.766	0.819	0.305	5e-17
O14262	228	Putative uncharacterized	yes	no	0.697	0.798	0.282	3e-12
Q94915	260	Rhythmically expressed ge	no	no	0.720	0.723	0.248	3e-11
Q04223	302	Uncharacterized protein Y	yes	no	0.708	0.612	0.265	6e-10
O26311	226	Uncharacterized HAD-hydro	yes	no	0.344	0.398	0.376	2e-07
Q9V1B3	238	Uncharacterized HAD-hydro	no	no	0.352	0.386	0.315	4e-07

>sp|Q9CYW4|HDHD3_MOUSE Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus GN=Hdhd3 PE=2 SV=1

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 107/198 (54%), Gaps = 11/198 (5%)

Query: 56  DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEKLRYEG-DGR 111
           D   TL++L  PV E YAS AR +G+ V+   +++ FR+A+ A    +P      G   R
Sbjct: 13  DVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRGLTSR 72

Query: 112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
            +W+ VV       G  +        +++YE ++    W +  GA  ++   +  G+K+A
Sbjct: 73  QWWKDVVLHTFRLAGVPDAQAMTPVADQLYEDFSSPFTWQVLEGAEMTLKGCRKRGLKLA 132

Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
           VVSNFD RL  +L  L + + FD V+ S  VGC KPDPRIF+ AL +  VE +   H+GD
Sbjct: 133 VVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQRACVEPAVAAHVGD 192

Query: 225 DEKADKQGANSLGIDCWL 242
               D QG+ ++G+  +L
Sbjct: 193 SYLCDYQGSQAVGMHSFL 210

Mus musculus (taxid: 10090)

>sp|Q5E9D6|HDHD3_BOVIN Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus GN=HDHD3 PE=2 SV=1

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 11/198 (5%)

Query: 56  DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAA---PWPEKLRYEGDGRP 112
           D   TLL+L  PV   YA+ AR +GL V++  + + F++A+ A    +P      G    
Sbjct: 13  DVKDTLLRLRHPVGVEYATKARAHGLEVEATALGQAFKQAYKAQSQSFPNYGLGHGLTSH 72

Query: 113 FWRLVVSEAT----GCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
            W L + + T    G  +        E++Y+ ++    W +  GA  ++   +  G+K+A
Sbjct: 73  QWWLDLVQQTFHQAGVRDAQAVAPIAEQLYKDFSSPSTWQVLEGAEATLRGCRKRGLKLA 132

Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
           VVSNFD RL  +L+ + + + FD V+ S   G  KPDPRIF  AL    VE +   HIGD
Sbjct: 133 VVSNFDRRLEDILEGVGLREHFDFVLTSEAAGWPKPDPRIFHEALHLAQVEPAVGAHIGD 192

Query: 225 DEKADKQGANSLGIDCWL 242
             + D +GA ++G+  +L
Sbjct: 193 SYQRDYKGARAVGMHSFL 210

Bos taurus (taxid: 9913)

>sp|Q9BSH5|HDHD3_HUMAN Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Homo sapiens GN=HDHD3 PE=1 SV=1

 Score = 92.4 bits (228), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 11/198 (5%)

Query: 56  DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAA---PWPE-KLRYEGDGR 111
           D   TLL+L  P+ E YA+ AR +GL V+ + +++GFR+A+ A    +P   L +    R
Sbjct: 13  DVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSR 72

Query: 112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
            +W  VV +     G  +        E++Y+ ++    W +  GA  ++   +  G+++A
Sbjct: 73  QWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLA 132

Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
           V+SNFD RL  +L  L + + FD V+ S   G  KPDPRIF+ AL    +E     H+GD
Sbjct: 133 VISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGD 192

Query: 225 DEKADKQGANSLGIDCWL 242
           +   D QG  ++G+  +L
Sbjct: 193 NYLCDYQGPRAVGMHSFL 210

Homo sapiens (taxid: 9606)

>sp|Q7T012|HDHD3_DANRE Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Danio rerio GN=hdhd3 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)

Query: 53  VLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAF---AAPWPEKLRYEG- 108
           VL D   TLL++   V E Y   A++ GL +  A ++  FR A+   +   P   R +G 
Sbjct: 8   VLWDVKDTLLKVRRSVGEQYCREAQQAGLQLSPAQVETAFRLAYKQKSQLLPNYGRAQGM 67

Query: 109 DGRPFWRLVVSEATGCTN-------DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGV 161
           D + +W  +V +  G          D     +Y  +   E W +   +  ++      G+
Sbjct: 68  DSQVWWTGLVRDTFGQCGVHDPALLDKLANNLYHNFCGPENWEVFSDSNSTLKSCTALGL 127

Query: 162 KVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH 221
           K  VVSNFD RL  +L+   ++  F  +V S +    KPDP IF  AL++  V AS  VH
Sbjct: 128 KQGVVSNFDRRLEGILRGCGLLTHFSFIVTSEDARVAKPDPAIFSQALERCGVPASSVVH 187

Query: 222 IGDDEKADKQGANSLGIDCWL 242
           +GD    D   + SLGI  +L
Sbjct: 188 VGDHYVKDYLTSRSLGIRGYL 208

Danio rerio (taxid: 7955)

>sp|Q5HZL9|HDHD3_XENLA Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1

 Score = 88.2 bits (217), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 13/213 (6%)

Query: 56  DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEKLRYEG-DGR 111
           D   TLL++  PV + Y + A+K GL V+   ++  FR A+ +    +P     +G   R
Sbjct: 9   DVKDTLLRVRVPVGQQYYAEAKKRGLCVNPGTLETSFRNAYRSHSRLFPNYGLAQGMSSR 68

Query: 112 PFWRLVVSEA---TGCTNDDYFE----EVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
            +W  VV +    +G  + D  +    ++Y+ ++    W L  GA +++    + G+++A
Sbjct: 69  QWWLDVVLQTFRLSGIEDSDTVQSLAKQLYQDFSTAHNWALVPGAREALDSCTNLGLRMA 128

Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
           V+SNFD RL +LL+   +   FD VV +   G  KP   IF  AL    V   + VH+GD
Sbjct: 129 VISNFDRRLEELLRQCCLERYFDFVVTAESAGVAKPHLGIFHKALSLAKVPPHQAVHVGD 188

Query: 225 DEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI 257
           D   D   A  +G+  +L  I  KT   +Q  I
Sbjct: 189 DYVNDYCAARMVGMHSYL--IHPKTPPKLQWNI 219

Xenopus laevis (taxid: 8355)

>sp|O14262|YFP5_SCHPO Putative uncharacterized hydrolase C7D4.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC7D4.05 PE=3 SV=3

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 16/198 (8%)

Query: 53  VLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRP 112
           V  DA GT+L L++PV   Y+ +A+KYG++    +I+    KAF   + EK +  G    
Sbjct: 13  VTFDAFGTILHLSKPVPIVYSEVAQKYGVHATIDEIEHNSNKAFKD-FSEKHKNHGKKSG 71

Query: 113 F----WRLVVSEATGCTN--DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVK--VA 164
                W + V E +  T    +  EE++ Y++K   + + H      L       K  + 
Sbjct: 72  LNPHDWWIKVIEHSFPTPVPAEMAEELWSYFSKKTGYTI-HPLLIDFLKRNKEERKYIIG 130

Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQ------MSVEASR 218
           ++SN D R+R +L+D  +  L D    S +VG EKP   IF  A+++        ++   
Sbjct: 131 IISNTDERIRTVLEDYGIDHLIDIYAFSYDVGFEKPSREIFDYAMEKAVKLLGQEIQPEE 190

Query: 219 TVHIGDDEKADKQGANSL 236
            +H+GDD   D   A ++
Sbjct: 191 CMHLGDDLIKDVSAARNI 208

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q94915|REG2_DROME Rhythmically expressed gene 2 protein OS=Drosophila melanogaster GN=Reg-2 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 21/209 (10%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
           +  +  D   TLLQ      + Y  I   +G   D+ ++ K F+  +     +   +  D
Sbjct: 7   FRLITFDVTNTLLQFRTTPGKQYGEIGALFGARCDNNELAKNFKANWYKMNRDYPNFGRD 66

Query: 110 GRP------FWRLVVS----EATGCTND----DYFEEVYEYYAKGEAWHLPHGAYQSILL 155
             P      +WR +++    E+     D    ++   + E Y     W   +G+ + +  
Sbjct: 67  TNPQMEWQQWWRKLIAGTFAESGAAIPDEKLHNFSNHLIELYKTSICWQPCNGSVELLQQ 126

Query: 156 L----KDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQ 211
           L    K    K+ V++NFD RL  LL++  +    D  + S EV  EKPDP+IF+ A+++
Sbjct: 127 LRKELKPEKCKLGVIANFDPRLPTLLQNTKLDQYLDFAINSYEVQAEKPDPQIFQKAMEK 186

Query: 212 ---MSVEASRTVHIGDDEKADKQGANSLG 237
               +++    +HIGD    D   A  LG
Sbjct: 187 SGLKNLKPEECLHIGDGPTTDYLAAKELG 215

Drosophila melanogaster (taxid: 7227)

>sp|Q04223|YM14_YEAST Uncharacterized protein YMR130W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR130W PE=1 SV=1

 Score = 64.7 bits (156), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 22/207 (10%)

Query: 53  VLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAF---AAPWPEKLRYEGD 109
           +  DA  TL     PV E Y  + RKYG+  + + +   F   F      +P+  +Y G 
Sbjct: 24  ITFDAYNTLYATKLPVMEQYCIVGRKYGIKANPSTLTNNFPHVFKKLKEDYPQYGKYSGI 83

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKD-----AGVKVA 164
               W  ++       N+   E + E   + E +         I  LKD       V + 
Sbjct: 84  KPEQWWSILIRNVFAPNEIPDEMINEILMRFEGFDSYFVYPDLIKFLKDLKSRHPDVILG 143

Query: 165 VVSNFDTRLRKLLKDLNVIDLFDA-VVISSEVGCEKPDPRIFKAALDQMSVEASRTV--- 220
           +VSN D    KLLK++ + + F   + +S E+   KPD  IF+ ALD +  +    +   
Sbjct: 144 IVSNTDPIFYKLLKNIGLFETFSGHIYLSYELNLAKPDRAIFQYALDDIISKQPHLLEKY 203

Query: 221 ----------HIGDDEKADKQGANSLG 237
                     HIGD+ K D +GA + G
Sbjct: 204 TREEILQHCFHIGDELKNDLEGAEAAG 230

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O26311|Y209_METTH Uncharacterized HAD-hydrolase MTH_209 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_209 PE=3 SV=1

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 3/93 (3%)

Query: 152 SILLLKDAGVKVAVVSNFDT--RLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
           +++ LK  G ++ V+SN  T  +  KL++ L +   FD VV S EVG EKP+ RIF+ AL
Sbjct: 102 TLIDLKSKGYRLGVISNGITIKQWEKLIR-LGIHHFFDEVVTSDEVGFEKPNIRIFEEAL 160

Query: 210 DQMSVEASRTVHIGDDEKADKQGANSLGIDCWL 242
            +M  +  R+V +G+    D  GA + G+   L
Sbjct: 161 RRMGCKPERSVMVGNKFNEDILGATNAGMSAIL 193

Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (taxid: 187420)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9V1B3|YB10_PYRAB Uncharacterized HAD-hydrolase PYRAB05140 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB05140 PE=3 SV=1

 Score = 55.1 bits (131), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 3/95 (3%)

Query: 148 GAYQSILLLKDAGVKVAVVS--NFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIF 205
           GA + ++ L++ G ++ +++  N   +  K+L+ L + D F+ V+IS   G +KP P+IF
Sbjct: 98  GARKVLIRLRELGYRLGIITDGNPVKQWEKILR-LEIDDFFEHVIISDFEGVKKPHPKIF 156

Query: 206 KAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC 240
           K AL   +V+A   + +GD   +D  GA ++G+  
Sbjct: 157 KKALKAFNVDAQEALMVGDRLYSDIYGAKNVGMKT 191

Pyrococcus abyssi (strain GE5 / Orsay) (taxid: 272844)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
224111272	254	predicted protein [Populus trichocarpa]	0.965	0.992	0.741	1e-105
225425718	258	PREDICTED: haloacid dehalogenase-like hy	0.980	0.992	0.683	1e-101
297844334	254	hypothetical protein ARALYDRAFT_312429 [	0.969	0.996	0.666	1e-99
30683719	254	haloacid dehalogenase-like hydrolase dom	0.969	0.996	0.647	6e-98
255562824	226	catalytic, putative [Ricinus communis] g	0.865	1.0	0.734	8e-98
28393346	250	unknown protein [Arabidopsis thaliana]	0.950	0.992	0.647	2e-96
50897254	238	At1g14310 [Arabidopsis thaliana]	0.842	0.924	0.722	6e-96
357486883	278	Haloacid dehalogenase-like hydrolase dom	0.973	0.913	0.636	1e-95
351725443	233	uncharacterized protein LOC100306694 [Gl	0.888	0.995	0.690	1e-92
115474985	271	Os08g0169800 [Oryza sativa Japonica Grou	0.804	0.774	0.7	3e-87

>gi|224111272|ref|XP_002315800.1| predicted protein [Populus trichocarpa] gi|222864840|gb|EEF01971.1| predicted protein [Populus trichocarpa]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/259 (74%), Positives = 221/259 (85%), Gaps = 7/259 (2%)

Query: 1   MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGT 60
           MEAC +KC HGN+L KALK              SSMP+HS   +SVKKAYDA+LLDAGGT
Sbjct: 1   MEACFAKCSHGNALFKALKPL-----KLKLSSSSSMPIHSA--ESVKKAYDALLLDAGGT 53

Query: 61  LLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSE 120
           LLQL  PVEETYASI RKYGL   SADIK+GF++AFAAPWPEKLRY+GDGRPFW+LVVSE
Sbjct: 54  LLQLTRPVEETYASIGRKYGLTASSADIKQGFKRAFAAPWPEKLRYQGDGRPFWKLVVSE 113

Query: 121 ATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDL 180
           ATG TN+DYFEEVY+YYA GEAW+LP GAY+++ LLKDAGVKV VVSNFDTRLRKLLKDL
Sbjct: 114 ATGSTNNDYFEEVYKYYANGEAWYLPDGAYEALYLLKDAGVKVVVVSNFDTRLRKLLKDL 173

Query: 181 NVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC 240
           NVI+LFD+++ISSEVG EKPDP+IF+AAL + SVEA + VH+GDD KADKQGAN++GIDC
Sbjct: 174 NVIELFDSLIISSEVGYEKPDPKIFEAALVEASVEAGKAVHVGDDLKADKQGANAIGIDC 233

Query: 241 WLWGIDVKTFSDVQNRILI 259
           WLWG DVKTFSD++NRILI
Sbjct: 234 WLWGADVKTFSDIKNRILI 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425718|ref|XP_002274402.1| PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Vitis vinifera] gi|296086384|emb|CBI31973.3| unnamed protein product [Vitis vinifera]

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/262 (68%), Positives = 215/262 (82%), Gaps = 6/262 (2%)

Query: 1   MEACISKCCHGNSLLKALKMKPLRFNISNRLR-CSSMPLHSGVGKSVKKAYDAVLLDAGG 59
           MEAC+++C  G    + L     RFN     +  +S+   S  G+   +AYD +LLDAGG
Sbjct: 1   MEACVARCSDG-VFFRCLN----RFNFRRSFKPMASIHAASDGGRWFNRAYDGLLLDAGG 55

Query: 60  TLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVS 119
           TLLQLA+PVE TYA I RKYGL   SA+IK+GFR+AFAAPWPEKLRY+GDGRPFW+LVVS
Sbjct: 56  TLLQLAKPVESTYADIGRKYGLTASSAEIKQGFRRAFAAPWPEKLRYQGDGRPFWKLVVS 115

Query: 120 EATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKD 179
           EATGC N+DYFEEVYEYYA G+AWHLP GA +++ LLKDAGVK+AVVSNFDTRLRKLLKD
Sbjct: 116 EATGCANNDYFEEVYEYYANGDAWHLPTGASETMFLLKDAGVKLAVVSNFDTRLRKLLKD 175

Query: 180 LNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGID 239
           LNV+DLFDAV+ISSEVG EKPD +IFKAALDQ+ VEA + VH+GDD++ADK GA+++GID
Sbjct: 176 LNVLDLFDAVIISSEVGYEKPDAKIFKAALDQIGVEAGKAVHVGDDQEADKVGASAVGID 235

Query: 240 CWLWGIDVKTFSDVQNRILITE 261
           CWLWG DVKTFSD+Q +ILI+E
Sbjct: 236 CWLWGTDVKTFSDIQKQILISE 257

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297844334|ref|XP_002890048.1| hypothetical protein ARALYDRAFT_312429 [Arabidopsis lyrata subsp. lyrata] gi|297335890|gb|EFH66307.1| hypothetical protein ARALYDRAFT_312429 [Arabidopsis lyrata subsp. lyrata]

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 174/261 (66%), Positives = 220/261 (84%), Gaps = 8/261 (3%)

Query: 1   MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGT 60
           MEAC+ +C  G+ L++AL+  PL  ++ +    S        GK +K+AYD +LLDAGGT
Sbjct: 1   MEACL-RCSRGSYLIEALR--PLSSSLRSSSSVSFS-----TGKPIKRAYDGLLLDAGGT 52

Query: 61  LLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSE 120
           LLQL++PV ETYAS+ +KYGL    A+IK+GF++AF+APWPEKLRY+GDGRPFW+LVVSE
Sbjct: 53  LLQLSKPVHETYASLGQKYGLKTTPAEIKQGFKRAFSAPWPEKLRYQGDGRPFWKLVVSE 112

Query: 121 ATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDL 180
           ATGC+++DYFEEVY+YYA GEAWHLP GAY+++ LLKDAGVK+AVVSNFDTRLRKLLKDL
Sbjct: 113 ATGCSDNDYFEEVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVVSNFDTRLRKLLKDL 172

Query: 181 NVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC 240
           NVID+FDAV++S+EVG EKPD RIFK+AL+Q+SVE +R VH+GDDE ADK GAN++GI C
Sbjct: 173 NVIDMFDAVIVSAEVGYEKPDERIFKSALEQISVEVNRAVHVGDDEGADKGGANAMGIAC 232

Query: 241 WLWGIDVKTFSDVQNRILITE 261
           WLWG DV+TFSD+Q RIL++E
Sbjct: 233 WLWGKDVQTFSDIQERILVSE 253

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30683719|ref|NP_172883.2| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|7262672|gb|AAF43930.1|AC012188_7 Contains similarity to a hypothetical protein from Arabidopsis thaliana gb|AC005662.2 and contains a haloacid dehalogenase-like hydrolase PF|00702 domain. EST gb|F15167 comes from this gene [Arabidopsis thaliana] gi|332191021|gb|AEE29142.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]

 Score =  362 bits (930), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 169/261 (64%), Positives = 218/261 (83%), Gaps = 8/261 (3%)

Query: 1   MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGT 60
           MEAC+ +C  G+ L++A++        S+ +  S+       GK +K+AYD +LLDAGGT
Sbjct: 1   MEACL-RCSRGSYLIEAMRPLSSSLRPSSSVSFST-------GKPIKRAYDGLLLDAGGT 52

Query: 61  LLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSE 120
           LLQL++PV ETYAS+ +KYGL    A+IK+GF++ F+APWPEKLRY+GDGRPFW+LVVSE
Sbjct: 53  LLQLSKPVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSE 112

Query: 121 ATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDL 180
           ATGC+++DYFE+VY+YYA GEAWHLP GAY+++ LLKDAGVK+AVVSNFDTRLRKLLKDL
Sbjct: 113 ATGCSDNDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVVSNFDTRLRKLLKDL 172

Query: 181 NVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC 240
           NVID+FDAV++S+EVG EKPD RIFK+AL+Q+SV+ +R VH+GDDE ADK GAN++GI C
Sbjct: 173 NVIDMFDAVIVSAEVGYEKPDERIFKSALEQISVDVNRAVHVGDDEGADKGGANAIGIAC 232

Query: 241 WLWGIDVKTFSDVQNRILITE 261
           WLWG DV+TFSD+Q RIL++E
Sbjct: 233 WLWGEDVQTFSDIQKRILVSE 253

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562824|ref|XP_002522417.1| catalytic, putative [Ricinus communis] gi|223538302|gb|EEF39909.1| catalytic, putative [Ricinus communis]

 Score =  362 bits (929), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 166/226 (73%), Positives = 197/226 (87%)

Query: 36  MPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKA 95
           M + SG  KS+KKAYDA+LLDAGGTLLQL  PVEETYASI RKYGL+  SA+IKKGF++A
Sbjct: 1   MSIRSGGTKSLKKAYDALLLDAGGTLLQLPHPVEETYASIGRKYGLSTSSAEIKKGFKRA 60

Query: 96  FAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILL 155
           F+A WP+KLRY+GD RPFW+ VVSEATGC NDDYFEE+Y+Y+A G+AW LP GAY+++  
Sbjct: 61  FSASWPQKLRYQGDARPFWKFVVSEATGCDNDDYFEELYKYFADGDAWRLPDGAYETLFF 120

Query: 156 LKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVE 215
           LKDAGVK+AVVSNFDTRLRKLL+DLNVI+LFDA++ISSEVG EKPDP IFKAALDQ++V 
Sbjct: 121 LKDAGVKLAVVSNFDTRLRKLLQDLNVINLFDALIISSEVGYEKPDPNIFKAALDQLNVA 180

Query: 216 ASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRILITE 261
           A + VHIGDD KADK+GAN+ G+DCWLWG DV TF D+QNRIL+ E
Sbjct: 181 AGKAVHIGDDLKADKEGANATGVDCWLWGADVSTFRDIQNRILVAE 226

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|28393346|gb|AAO42097.1| unknown protein [Arabidopsis thaliana]

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 165/255 (64%), Positives = 213/255 (83%), Gaps = 7/255 (2%)

Query: 7   KCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAE 66
           +C  G+ L++A++        S+ +  S+       GK +K+AYD +LLDAGGTLLQL++
Sbjct: 2   RCSRGSYLIEAMRPLSSSLRPSSSVSFST-------GKPIKRAYDGLLLDAGGTLLQLSK 54

Query: 67  PVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN 126
           PV ETYAS+ +KYGL    A+IK+GF++ F+APWPEKLRY+GDGRPFW+LVVSEATGC++
Sbjct: 55  PVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSEATGCSD 114

Query: 127 DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLF 186
           +DYFE+VY+YYA GEAWHLP GAY+++ LLKDAGVK+AVVSNFDTRLRKLLKDLNVID+F
Sbjct: 115 NDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVVSNFDTRLRKLLKDLNVIDMF 174

Query: 187 DAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID 246
           DAV++S+EVG EKPD RIFK+AL+Q+SV+ +R VH+GDDE ADK GAN++GI CWLWG D
Sbjct: 175 DAVIVSAEVGYEKPDERIFKSALEQISVDVNRAVHVGDDEGADKGGANAIGIACWLWGED 234

Query: 247 VKTFSDVQNRILITE 261
           V+TFSD+Q RIL++E
Sbjct: 235 VQTFSDIQKRILVSE 249

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|50897254|gb|AAT85766.1| At1g14310 [Arabidopsis thaliana]

 Score =  356 bits (913), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 159/220 (72%), Positives = 198/220 (90%)

Query: 42  VGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWP 101
            GK +K+AYD +LLDAGGTLLQL++PV ETYAS+ +KYGL    A+IK+GF++ F+APWP
Sbjct: 18  TGKPIKRAYDGLLLDAGGTLLQLSKPVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWP 77

Query: 102 EKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGV 161
           EKLRY+GDGRPFW+LVVSEATGC+++DYFE+VY+YYA GEAWHLP GAY+++ LLKDAGV
Sbjct: 78  EKLRYQGDGRPFWKLVVSEATGCSDNDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGV 137

Query: 162 KVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH 221
           K+AVVSNFDTRLRKLLKDLNVID+FDAV++S+EVG EKPD RIFK+AL+Q+SV+ +R VH
Sbjct: 138 KMAVVSNFDTRLRKLLKDLNVIDMFDAVIVSAEVGYEKPDERIFKSALEQISVDVNRAVH 197

Query: 222 IGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRILITE 261
           +GDDE ADK GAN++GI CWLWG DV+TFSD+Q RIL++E
Sbjct: 198 VGDDEGADKGGANAIGIACWLWGEDVQTFSDIQKRILVSE 237

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357486883|ref|XP_003613729.1| Haloacid dehalogenase-like hydrolase domain-containing protein [Medicago truncatula] gi|355515064|gb|AES96687.1| Haloacid dehalogenase-like hydrolase domain-containing protein [Medicago truncatula]

 Score =  355 bits (910), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 173/272 (63%), Positives = 211/272 (77%), Gaps = 18/272 (6%)

Query: 5   ISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGV---------------GKSVKKA 49
           + +C   NSL KALK     F  SN +  SS+P  S                 G    +A
Sbjct: 9   MMRCSPSNSLFKALKPN---FRNSNLVPNSSLPFFSSTQINKGASRCSHSHSHGGGTGRA 65

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
           YDA+LLDAGGTLLQLA PVE+TYA+I  K+GL V+ A+IK+GF++AF+A W EKLRY+GD
Sbjct: 66  YDALLLDAGGTLLQLANPVEDTYATIGSKFGLTVNPAEIKQGFKRAFSAQWSEKLRYQGD 125

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNF 169
           GRPFW+ VVSEATGC ++D+FEEVYEYYAKG+AWHLP+GA+ ++  LKDAGVK+AVVSNF
Sbjct: 126 GRPFWKFVVSEATGCGDEDFFEEVYEYYAKGDAWHLPNGAFDTMTHLKDAGVKMAVVSNF 185

Query: 170 DTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKAD 229
           D+RLRKLLKDLNV+ LFDAV+ISSEVG EKPD RIF+AALDQ++VEA + +HIGDD+KAD
Sbjct: 186 DSRLRKLLKDLNVLHLFDAVIISSEVGYEKPDQRIFQAALDQLNVEAGKALHIGDDQKAD 245

Query: 230 KQGANSLGIDCWLWGIDVKTFSDVQNRILITE 261
           K GAN +GIDCWLWG DVKTFS++Q RIL  E
Sbjct: 246 KFGANDVGIDCWLWGTDVKTFSEIQIRILNPE 277

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725443|ref|NP_001235045.1| uncharacterized protein LOC100306694 [Glycine max] gi|255629299|gb|ACU14994.1| unknown [Glycine max]

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 165/239 (69%), Positives = 203/239 (84%), Gaps = 7/239 (2%)

Query: 7   KCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAE 66
           +C H N+L +ALK KP     ++ L  SSM ++ G   +  KAYDA+LLDAGGTLLQLA+
Sbjct: 2   RCSHANALFRALKPKPR----NSSLPLSSMAINKG---NSNKAYDALLLDAGGTLLQLAK 54

Query: 67  PVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN 126
           PVEE YA+I  KYG+ VD A IK+GF++AFAAPWPEKLRY+GDGRPFW+LVVSEATGC +
Sbjct: 55  PVEEIYATIGSKYGVTVDPAMIKQGFKRAFAAPWPEKLRYQGDGRPFWKLVVSEATGCGD 114

Query: 127 DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLF 186
           +DYFEEVYEYYAKG+AWHLP GA+++I  LKDAGVK+AVVSNFD RLRKLLKDLNV++LF
Sbjct: 115 EDYFEEVYEYYAKGDAWHLPDGAFETITFLKDAGVKMAVVSNFDNRLRKLLKDLNVLNLF 174

Query: 187 DAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGI 245
           DAV+ISSEVG EKPDPRIF+AALD+++VEA + +HIGDD+KADK GAN++GIDC  +G+
Sbjct: 175 DAVIISSEVGYEKPDPRIFQAALDEVNVEACKALHIGDDQKADKLGANAVGIDCCSYGV 233

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115474985|ref|NP_001061089.1| Os08g0169800 [Oryza sativa Japonica Group] gi|37806112|dbj|BAC99562.1| haloacid dehalogenase-like hydrolase-like protein [Oryza sativa Japonica Group] gi|40253762|dbj|BAD05701.1| haloacid dehalogenase-like hydrolase-like protein [Oryza sativa Japonica Group] gi|113623058|dbj|BAF23003.1| Os08g0169800 [Oryza sativa Japonica Group] gi|125602334|gb|EAZ41659.1| hypothetical protein OsJ_26195 [Oryza sativa Japonica Group] gi|218200541|gb|EEC82968.1| hypothetical protein OsI_27973 [Oryza sativa Indica Group]

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 147/210 (70%), Positives = 183/210 (87%)

Query: 49  AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEG 108
           A+  +LLDAGGTLLQLA PV +TYAS+ R+YG++     IK+GF++AF+APWP+ LRY+G
Sbjct: 57  AFGGLLLDAGGTLLQLARPVAQTYASLGRRYGMSKSEESIKEGFKRAFSAPWPKTLRYQG 116

Query: 109 DGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSN 168
           DGRPFWR+VV+EAT CTN+DYFEEVYEYYA G+AW LP GAY+++  LKDAGVK+AVVSN
Sbjct: 117 DGRPFWRIVVAEATECTNNDYFEEVYEYYAHGDAWRLPAGAYETLRDLKDAGVKLAVVSN 176

Query: 169 FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKA 228
           FDTRLRKLLKDL+V D+FDA+V+SSEVG EKP P IFK ALDQ+ VEAS+ VH+GDDE A
Sbjct: 177 FDTRLRKLLKDLHVSDMFDAIVVSSEVGHEKPAPEIFKRALDQIGVEASKAVHVGDDETA 236

Query: 229 DKQGANSLGIDCWLWGIDVKTFSDVQNRIL 258
           DK GAN++G++CWLWG DV+TFS++Q+RIL
Sbjct: 237 DKAGANAIGLECWLWGQDVRTFSEIQDRIL 266

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
TAIR|locus:2012617	254	AT1G14310 [Arabidopsis thalian	0.969	0.996	0.674	8.7e-95
TAIR|locus:2040272	290	AT2G41250 [Arabidopsis thalian	0.796	0.717	0.461	1.6e-47
RGD|1585262	251	Hdhd3 "haloacid dehalogenase-l	0.716	0.745	0.363	1.4e-25
MGI|MGI:1919998	251	Hdhd3 "haloacid dehalogenase-l	0.716	0.745	0.348	9.7e-25
WB|WBGene00010481	248	K01G5.10 [Caenorhabditis elega	0.773	0.814	0.334	1.3e-22
UNIPROTKB|E2R983	251	HDHD3 "Uncharacterized protein	0.716	0.745	0.348	1.6e-22
UNIPROTKB|F1NN49	239	HDHD3 "Uncharacterized protein	0.716	0.782	0.348	1.5e-21
UNIPROTKB|Q9BSH5	251	HDHD3 "Haloacid dehalogenase-l	0.716	0.745	0.328	1.9e-21
UNIPROTKB|Q5E9D6	251	HDHD3 "Haloacid dehalogenase-l	0.716	0.745	0.328	4.9e-21
ZFIN|ZDB-GENE-040724-118	242	hdhd3 "haloacid dehalogenase-l	0.727	0.785	0.313	5.8e-18

TAIR|locus:2012617 AT1G14310 [Arabidopsis thaliana (taxid:3702)]

 Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
 Identities = 176/261 (67%), Positives = 222/261 (85%)

Query:     1 MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGT 60
             MEAC+ +C  G+ L++A  M+PL    S+ LR SS    S  GK +K+AYD +LLDAGGT
Sbjct:     1 MEACL-RCSRGSYLIEA--MRPL----SSSLRPSSSVSFS-TGKPIKRAYDGLLLDAGGT 52

Query:    61 LLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSE 120
             LLQL++PV ETYAS+ +KYGL    A+IK+GF++ F+APWPEKLRY+GDGRPFW+LVVSE
Sbjct:    53 LLQLSKPVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSE 112

Query:   121 ATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDL 180
             ATGC+++DYFE+VY+YYA GEAWHLP GAY+++ LLKDAGVK+AVVSNFDTRLRKLLKDL
Sbjct:   113 ATGCSDNDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVVSNFDTRLRKLLKDL 172

Query:   181 NVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC 240
             NVID+FDAV++S+EVG EKPD RIFK+AL+Q+SV+ +R VH+GDDE ADK GAN++GI C
Sbjct:   173 NVIDMFDAVIVSAEVGYEKPDERIFKSALEQISVDVNRAVHVGDDEGADKGGANAIGIAC 232

Query:   241 WLWGIDVKTFSDVQNRILITE 261
             WLWG DV+TFSD+Q RIL++E
Sbjct:   233 WLWGEDVQTFSDIQKRILVSE 253

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

TAIR|locus:2040272 AT2G41250 [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 97/210 (46%), Positives = 131/210 (62%)

Query:    50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWP-EKLRYEG 108
             + A+L+DA GTLL  A+P  + Y +I  KYG+    A+I   +R+A+  PW    LRY  
Sbjct:    77 HKALLVDAVGTLLVPAQPTAQIYKNIGEKYGVEYSEAEILTRYRRAYQKPWGGSHLRYVN 136

Query:   109 DGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHL-PHGAYQSILLLKDAGVKVAVVS 167
             D RPFW+ +V+ +TGC++  YFEE+Y Y+   +AW L    A +    +K+AGVKVA+VS
Sbjct:   137 DARPFWQYIVTASTGCSDSQYFEELYSYFTTEQAWKLCDPDAGKVFKAIKEAGVKVAIVS 196

Query:   168 NFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEK 227
             NFDTRLR LL+ L   D FDAV +S+EV  EKP+P IF  A + + V     VH+GDD +
Sbjct:   197 NFDTRLRPLLRALRCEDWFDAVAVSAEVEAEKPNPTIFLKACELLEVNPEDAVHVGDDRR 256

Query:   228 ADKQGANSLGIDCWLWGIDVKTFSDVQNRI 257
              D  GA   G D WLWG +V +F  V  RI
Sbjct:   257 NDVWGARDAGCDAWLWGSEVTSFKQVAQRI 286

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0046685 "response to arsenic-containing substance" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

RGD|1585262 Hdhd3 "haloacid dehalogenase-like hydrolase domain containing 3" [Rattus norvegicus (taxid:10116)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 72/198 (36%), Positives = 108/198 (54%)

Query:    56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEK-LRYEGDGR 111
             D   TL+++  PV E YAS AR +G+ V++  +++ FR+AF A    +P   L      R
Sbjct:    13 DVKDTLIKVRRPVGEEYASKARAHGVLVEATAVEQAFRQAFRAQSHSFPNYGLSLGLTSR 72

Query:   112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
              +W  VV       G  +        +++YE ++   AW +  GA  ++   +  G+K+A
Sbjct:    73 QWWMDVVLHTFRLAGVPDAQAMAPVADQLYEDFSSPFAWRVLEGAETTLKGCRKRGMKLA 132

Query:   165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
             VVSNFD RL  +L  L + + FD V+ S  VGC KPDPRIF+ AL    VE S   H+GD
Sbjct:   133 VVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQLACVEPSAAAHVGD 192

Query:   225 DEKADKQGANSLGIDCWL 242
               + D QGA ++G+  +L
Sbjct:   193 SYRCDYQGARAVGMHSFL 210

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

MGI|MGI:1919998 Hdhd3 "haloacid dehalogenase-like hydrolase domain containing 3" [Mus musculus (taxid:10090)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 69/198 (34%), Positives = 107/198 (54%)

Query:    56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEKLRYEG-DGR 111
             D   TL++L  PV E YAS AR +G+ V+   +++ FR+A+ A    +P      G   R
Sbjct:    13 DVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRGLTSR 72

Query:   112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
              +W+ VV       G  +        +++YE ++    W +  GA  ++   +  G+K+A
Sbjct:    73 QWWKDVVLHTFRLAGVPDAQAMTPVADQLYEDFSSPFTWQVLEGAEMTLKGCRKRGLKLA 132

Query:   165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
             VVSNFD RL  +L  L + + FD V+ S  VGC KPDPRIF+ AL +  VE +   H+GD
Sbjct:   133 VVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQRACVEPAVAAHVGD 192

Query:   225 DEKADKQGANSLGIDCWL 242
                 D QG+ ++G+  +L
Sbjct:   193 SYLCDYQGSQAVGMHSFL 210

GO:0005739 "mitochondrion" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

WB|WBGene00010481 K01G5.10 [Caenorhabditis elegans (taxid:6239)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 76/227 (33%), Positives = 109/227 (48%)

Query:    27 ISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSA 86
             +SN LR +S  L      S       + LDA  TL+ + E     Y+  AR+Y L VDS 
Sbjct:     2 LSNLLRTTSRNL------STPPVVKVLSLDARDTLITMKESPPIVYSRFARQYDLEVDSD 55

Query:    87 DIKKGF-----RKAFAAPWPEKLRYEGDGRPFWRLVVSEAT--GCTNDDYFEEV------ 133
              I   F     R + A+P      + G G   W + V  +T   C  D     V      
Sbjct:    56 QIMGSFLKNYKRMSIASPC---FGFNGIGNKSWWIEVVSSTLLDCAPDSEKGRVEVIAGA 112

Query:   134 -YEYYAKGEAWHLPHG-AYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVI 191
              Y +YA  E W L      Q++  L+  G+ + V+SNFD+RL+ LL   N++DLF   V+
Sbjct:   113 LYNHYATPEPWKLVESDTRQTLQKLRLKGIILVVISNFDSRLKSLLSQFNLLDLFSMTVL 172

Query:   192 SSEVGCEKPDPRIFKAALDQMS-VEASRTVHIGDDEKADKQGANSLG 237
             S E+G EKPD +IF+  ++    +  S  +HIGD+ K D  GA + G
Sbjct:   173 SGEIGYEKPDEKIFQLVVNHFDLISPSEILHIGDNLKNDFHGAKNFG 219

GO:0008152 "metabolic process" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0008236 "serine-type peptidase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0007281 "germ cell development" evidence=IMP

UNIPROTKB|E2R983 HDHD3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 69/198 (34%), Positives = 104/198 (52%)

Query:    56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEKLRYEG-DGR 111
             D   TLL+L  PV E YA+ AR +GL V++A + + FR+A+      +P     +G   R
Sbjct:    13 DVKDTLLRLRHPVGEEYAAKARAHGLEVEAATLGQAFRQAYRTQSHSFPNYGLSQGLTSR 72

Query:   112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
              +W  VV +     G  +        +++YE ++K   W +  GA  ++   +  G+++A
Sbjct:    73 RWWLDVVLQTFYLAGVRDAQAVAPIADQLYEDFSKPCTWQVLEGAAATLRGCRKRGLRLA 132

Query:   165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
             VVSNFD RL  +L  L + + FD V+ S   G  KPDPRIF  AL    VE +   HIGD
Sbjct:   133 VVSNFDRRLEDILTGLGLREHFDFVLTSEAAGWPKPDPRIFHEALRLAQVEPAGAAHIGD 192

Query:   225 DEKADKQGANSLGIDCWL 242
                 D +GA  +G+  +L
Sbjct:   193 SYLCDYKGAQGVGMHSFL 210

GO:0005739 "mitochondrion" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

UNIPROTKB|F1NN49 HDHD3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 69/198 (34%), Positives = 96/198 (48%)

Query:    56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEKLRYEG-DGR 111
             D   TLL+L  PV   YA+ A+ +G+ V    + + F+ A+ A    +P   R EG   R
Sbjct:    11 DVKDTLLRLRRPVGLIYAAEAQAHGVQVQPEALSQSFQAAYRAQSRRFPNYGRAEGLSSR 70

Query:   112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
              +W  VV E    TG   D       E +Y  Y     W L   A +++      G+++ 
Sbjct:    71 QWWVDVVKETFRLTGVHEDTVLTLIAENLYRDYCSARNWELLPEASETLSWCHQHGLRMG 130

Query:   165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
             VVSNFD RL  +L   N+   F  V+ S  VG  KPDP+IFKAAL    V   +  HIGD
Sbjct:   131 VVSNFDNRLESILVQCNLRHHFHFVLTSEAVGVAKPDPKIFKAALRLGGVLPEQAAHIGD 190

Query:   225 DEKADKQGANSLGIDCWL 242
             D   D + A  +G+  +L
Sbjct:   191 DYSKDYRAAREVGMHSFL 208

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q9BSH5 HDHD3 "Haloacid dehalogenase-like hydrolase domain-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 65/198 (32%), Positives = 106/198 (53%)

Query:    56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEK-LRYEGDGR 111
             D   TLL+L  P+ E YA+ AR +GL V+ + +++GFR+A+ A    +P   L +    R
Sbjct:    13 DVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSR 72

Query:   112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
              +W  VV +     G  +        E++Y+ ++    W +  GA  ++   +  G+++A
Sbjct:    73 QWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLA 132

Query:   165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
             V+SNFD RL  +L  L + + FD V+ S   G  KPDPRIF+ AL    +E     H+GD
Sbjct:   133 VISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGD 192

Query:   225 DEKADKQGANSLGIDCWL 242
             +   D QG  ++G+  +L
Sbjct:   193 NYLCDYQGPRAVGMHSFL 210

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5E9D6 HDHD3 "Haloacid dehalogenase-like hydrolase domain-containing protein 3" [Bos taurus (taxid:9913)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 65/198 (32%), Positives = 103/198 (52%)

Query:    56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE-GDG---R 111
             D   TLL+L  PV   YA+ AR +GL V++  + + F++A+ A       Y  G G    
Sbjct:    13 DVKDTLLRLRHPVGVEYATKARAHGLEVEATALGQAFKQAYKAQSQSFPNYGLGHGLTSH 72

Query:   112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
              +W  +V +     G  +        E++Y+ ++    W +  GA  ++   +  G+K+A
Sbjct:    73 QWWLDLVQQTFHQAGVRDAQAVAPIAEQLYKDFSSPSTWQVLEGAEATLRGCRKRGLKLA 132

Query:   165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
             VVSNFD RL  +L+ + + + FD V+ S   G  KPDPRIF  AL    VE +   HIGD
Sbjct:   133 VVSNFDRRLEDILEGVGLREHFDFVLTSEAAGWPKPDPRIFHEALHLAQVEPAVGAHIGD 192

Query:   225 DEKADKQGANSLGIDCWL 242
               + D +GA ++G+  +L
Sbjct:   193 SYQRDYKGARAVGMHSFL 210

GO:0005739 "mitochondrion" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

ZFIN|ZDB-GENE-040724-118 hdhd3 "haloacid dehalogenase-like hydrolase domain containing 3" [Danio rerio (taxid:7955)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 63/201 (31%), Positives = 94/201 (46%)

Query:    53 VLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEKLRYEG- 108
             VL D   TLL++   V E Y   A++ GL +  A ++  FR A+       P   R +G 
Sbjct:     8 VLWDVKDTLLKVRRSVGEQYCREAQQAGLQLSPAQVETAFRLAYKQKSQLLPNYGRAQGM 67

Query:   109 DGRPFWRLVVSEATG-C------TNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGV 161
             D + +W  +V +  G C        D     +Y  +   E W +   +  ++      G+
Sbjct:    68 DSQVWWTGLVRDTFGQCGVHDPALLDKLANNLYHNFCGPENWEVFSDSNSTLKSCTALGL 127

Query:   162 KVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH 221
             K  VVSNFD RL  +L+   ++  F  +V S +    KPDP IF  AL++  V AS  VH
Sbjct:   128 KQGVVSNFDRRLEGILRGCGLLTHFSFIVTSEDARVAKPDPAIFSQALERCGVPASSVVH 187

Query:   222 IGDDEKADKQGANSLGIDCWL 242
             +GD    D   + SLGI  +L
Sbjct:   188 VGDHYVKDYLTSRSLGIRGYL 208

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.X.6095.1 hypothetical protein (252 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	261
TIGR02252	203	TIGR02252, DREG-2, REG-2-like, HAD superfamily (su	5e-62
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	7e-30
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	2e-20
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	3e-20
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	8e-20
TIGR01549	162	TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup	1e-16
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	3e-16
TIGR02254	224	TIGR02254, YjjG/YfnB, HAD superfamily (subfamily I	9e-15
PRK09449	224	PRK09449, PRK09449, dUMP phosphatase; Provisional	3e-14
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	3e-13
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	8e-13
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	1e-11
TIGR02247	211	TIGR02247, HAD-1A3-hyp, epoxide hydrolase N-termin	7e-11
TIGR02009	185	TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f	1e-09
TIGR01990	185	TIGR01990, bPGM, beta-phosphoglucomutase	4e-09
TIGR01454	205	TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic	2e-07
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	3e-07
PRK13222	226	PRK13222, PRK13222, phosphoglycolate phosphatase;	7e-07
PLN02919	1057	PLN02919, PLN02919, haloacid dehalogenase-like hyd	1e-05
TIGR01662	132	TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase,	1e-05
PRK09456	199	PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Pro	1e-05
PLN02940	382	PLN02940, PLN02940, riboflavin kinase	4e-05
TIGR03351	220	TIGR03351, PhnX-like, phosphonatase-like hydrolase	5e-05
COG2179	175	COG2179, COG2179, Predicted hydrolase of the HAD s	1e-04
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	2e-04
TIGR01656	147	TIGR01656, Histidinol-ppas, histidinol-phosphate p	2e-04
TIGR01449	213	TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas	3e-04
PRK08942	181	PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate p	7e-04
TIGR01428	198	TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalo	0.001
COG0241	181	COG0241, HisB, Histidinol phosphatase and related	0.001
TIGR01458	257	TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam	0.001
TIGR01459	242	TIGR01459, HAD-SF-IIA-hyp4, HAD-superfamily class	0.002
PRK13288	214	PRK13288, PRK13288, pyrophosphatase PpaX; Provisio	0.002
TIGR01460	236	TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Super	0.002

>gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase

 Score =  193 bits (493), Expect = 5e-62
 Identities = 77/202 (38%), Positives = 114/202 (56%), Gaps = 11/202 (5%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPE--KLRYEGD 109
            +  DA GTLL L EPV E Y  IARKYG+ V   ++++ FR+AF A         +   
Sbjct: 2   LITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSG 61

Query: 110 GRP--FWRLVVSEATG-------CTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAG 160
             P  +W+ +V +  G        + +  FEE+Y Y+A  E W +   A + +  L++ G
Sbjct: 62  LTPQQWWQKLVRDTFGRAGVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERG 121

Query: 161 VKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV 220
           + + V+SNFD+RLR LL+ L +++ FD VV S EVG EKPDP+IF+ AL++  +     +
Sbjct: 122 LILGVISNFDSRLRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181

Query: 221 HIGDDEKADKQGANSLGIDCWL 242
           HIGD  + D QGA + G    L
Sbjct: 182 HIGDSLRNDYQGARAAGWRALL 203

This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score =  111 bits (279), Expect = 7e-30
 Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 8/198 (4%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
             A+L D  GTLL           +   + G+     ++              +  Y G+
Sbjct: 4   IKAILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGE 63

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSIL-LLKDAG--VKVAVV 166
                  ++        D+  E V E      A       Y   L  LK+ G   K+ ++
Sbjct: 64  YGLTLERLLELLERLLGDEDAELVEELL---AALAKLLPDYPEALEALKELGKKYKLGIL 120

Query: 167 SNFDTRL-RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDD 225
           +N       + L+ L ++D FDAV IS +VG  KPDP IF+ AL+++ V     + +GD 
Sbjct: 121 TNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDS 180

Query: 226 EKADKQGANSLGID-CWL 242
            + D  GA +LG+   W+
Sbjct: 181 LENDILGARALGMKTVWI 198

Length = 229

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 85.1 bits (211), Expect = 2e-20
 Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 19/192 (9%)

Query: 53  VLLDAGGTLLQLAEPVEETYAS-IARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGR 111
           ++ D  GTL+     + E      A + GL++ + ++++     F     + LR      
Sbjct: 1   IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGGLPFDEALADLLREHPIDP 60

Query: 112 PFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFD- 170
                          D+  E + EY  +           + +  LK  GVK+ ++SN   
Sbjct: 61  ---------------DEILEALLEYNLES-RLEPFPDVVELLRRLKAKGVKLVILSNGSR 104

Query: 171 TRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK 230
             + +LL+ L ++DLFDAV  S +VG  KPDP  ++  L+++ +     + I D  + D 
Sbjct: 105 EAVERLLEKLGLLDLFDAVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDDSPE-DL 163

Query: 231 QGANSLGIDCWL 242
           + A + GI    
Sbjct: 164 EAARAAGIKTVH 175

Length = 176

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 85.9 bits (213), Expect = 3e-20
 Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 29/201 (14%)

Query: 52  AVLLDAGGTLL---QLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEG 108
           A+  D   TL+    LAE        +  + GLNVD  +  +   K           Y  
Sbjct: 4   AIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIK-------EYGS 56

Query: 109 D-GRPFWRLVVSEATGCTNDDYFEEVYEYYAKG-EAWHLPHGAY--------QSILLLKD 158
           +    F  L+           + E   +  A    A+H    AY         +++ L++
Sbjct: 57  NYPTHFDYLI--------RRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRE 108

Query: 159 AGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEAS 217
           +G ++ ++++       + L+ L V D FDAV+ S E G EKP P+IF AAL ++ V+  
Sbjct: 109 SGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPE 168

Query: 218 RTVHIGDDEKADKQGANSLGI 238
             V +GD    D +GA +LG+
Sbjct: 169 EAVMVGDRLDKDIKGAKNLGM 189

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 84.8 bits (210), Expect = 8e-20
 Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 13/201 (6%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE 107
               A+L D  GTL+  AE +   + +   + GL     +  +           E+L  E
Sbjct: 2   MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGE 61

Query: 108 GDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVS 167
            D      LV          + F   Y    +      P G  + +  LK AG K+ +V+
Sbjct: 62  ADEEAAAELV------ERLREEFLTAYAELLESR--LFP-GVKELLAALKSAGYKLGIVT 112

Query: 168 NFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDE 226
           N   R L  LLK L + D FD +V   +V   KPDP      L+++ ++    + +GD  
Sbjct: 113 NKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSL 172

Query: 227 KADKQGANSLGIDC--WLWGI 245
             D   A + G+      WG 
Sbjct: 173 -NDILAAKAAGVPAVGVTWGY 192

Length = 220

>gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

 Score = 74.7 bits (184), Expect = 1e-16
 Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 38/193 (19%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKA-------FAAPWPEKL 104
           A+L D  GTL+ +   +   +A    ++GLN  +    K  R          A    E+L
Sbjct: 1   AILFDIDGTLVDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIATEALEEL 60

Query: 105 RYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
           +                     + Y     +   +                LK+AG+K+ 
Sbjct: 61  QGHIGYD-------------AEEAYIPGAADLLPR----------------LKEAGIKLG 91

Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
           ++SN   R +KLL   + +  +  +++ S+    KP+P IF AAL+ + V     +H+GD
Sbjct: 92  IISNGSLRAQKLLLRKHGLGDYFELILGSDEIGSKPEPEIFLAALESLGVP-PEVLHVGD 150

Query: 225 DEKADKQGANSLG 237
           +  +D +GA + G
Sbjct: 151 NL-SDIKGARNAG 162

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 74.2 bits (182), Expect = 3e-16
 Identities = 41/192 (21%), Positives = 70/192 (36%), Gaps = 9/192 (4%)

Query: 50  YDAVLLDAGGTLLQLAEPVEET--YASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE 107
             AV+ D  GTL      V E       A   G+    A +             E +R  
Sbjct: 1   IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGV----AIVIAAGENLTKEGREELVRRL 56

Query: 108 GDGRPFWRLVVSEATGCTNDDYFEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVV 166
                    ++ E                         L  GA +++  LK+AG+K+A++
Sbjct: 57  LLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAIL 116

Query: 167 SN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDD 225
           +         + + L + D   +  +   VG  KPDP+IF+ AL+++ V+    + +GD 
Sbjct: 117 TGDNRLTANAIARLLGLFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDG 176

Query: 226 EKADKQGANSLG 237
              D   A + G
Sbjct: 177 V-NDIPAAKAAG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|162788 TIGR02254, YjjG/YfnB, HAD superfamily (subfamily IA) hydrolase, TIGR02254

 Score = 71.0 bits (174), Expect = 9e-15
 Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 50/220 (22%)

Query: 50  YDAVLLDAGGTLLQL----AEPVEETYASIARKYGLNVDSAD------IKKGFRKAFA-- 97
           Y  +L D   T+L      A  +   +       G+ +          I +G  +A+   
Sbjct: 1   YKTLLFDLDDTILDFQAAEALALRLLFE----DQGIPLTEDMFAQYKEINQGLWRAYEEG 56

Query: 98  ------------APWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHL 145
                       +   ++   E D                N  Y           E   L
Sbjct: 57  KITKDEVVNTRFSALLKEYNTEADEALL------------NQKYLR------FLEEGHQL 98

Query: 146 PHGAYQSILLLKDAGVKVAVVSNFDTRLR-KLLKDLNVIDLFDAVVISSEVGCEKPDPRI 204
             GA++ +  L+    ++ +V+N     + K L+   +   FD + +S + G +KPD  I
Sbjct: 99  LPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEI 157

Query: 205 FKAALDQMS-VEASRTVHIGDDEKADKQGANSLGID-CWL 242
           F  AL++M        + IGD   AD +G  + G+D CW+
Sbjct: 158 FNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWM 197

This family consists of uncharacterized proteobacterial and gram positive bacterial sequences including YjjG from E. coli and YfnB from B. subtilis. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. Length = 224

>gnl|CDD|181865 PRK09449, PRK09449, dUMP phosphatase; Provisional

 Score = 69.5 bits (171), Expect = 3e-14
 Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 3/85 (3%)

Query: 161 VKVAVVSNFDTRLRKL-LKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQM-SVEASR 218
           VK+ +++N  T L+++ L+   + D FD +VIS +VG  KPD  IF  AL+QM + + SR
Sbjct: 111 VKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSR 170

Query: 219 TVHIGDDEKADKQGANSLGID-CWL 242
            + +GD+  +D  G  + GID CWL
Sbjct: 171 VLMVGDNLHSDILGGINAGIDTCWL 195

Length = 224

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 64.7 bits (158), Expect = 3e-13
 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 18/126 (14%)

Query: 134 YEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVIS 192
               A+ E   L  G  +++  LK+ G+K+A+ +N   R + +LL++L + D FD V+ S
Sbjct: 14  EPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITS 73

Query: 193 SEVG----------------CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSL 236
           +                     KP+P    AAL  + V+    + +GD    D + A + 
Sbjct: 74  NGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIEMAKAA 132

Query: 237 GIDCWL 242
           G     
Sbjct: 133 GGLGVA 138

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 64.7 bits (158), Expect = 8e-13
 Identities = 46/187 (24%), Positives = 73/187 (39%), Gaps = 15/187 (8%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGR 111
           AVL D  G L+             A             +       +    +L       
Sbjct: 1   AVLFDLDGVLV-DTAHAIAKLVDRAEF------PLVPDELGVSEVGSL---ELALRRWKA 50

Query: 112 PFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDT 171
            + R  +S         Y +  YE   K     LP G    +  L+  G K+A+++N   
Sbjct: 51  KYGR-TMSAEDA--QLLYKQLFYEALEKEGLKPLP-GVRALLEALRARGKKLALLTNSPR 106

Query: 172 RLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQ 231
              KL+ +L +  LFD V+ SS+VG  KPDP I+  AL ++ ++ S  + + DD  A   
Sbjct: 107 ADAKLVLELGLRALFDVVIDSSDVGLGKPDPDIYLQALKKLGLKPSECLFV-DDSPAGID 165

Query: 232 GANSLGI 238
            A + G+
Sbjct: 166 AAKAAGM 172

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 38/193 (19%), Positives = 71/193 (36%), Gaps = 12/193 (6%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
             AV+ D  GTL+         +    ++YG+ +   +I++      A       +    
Sbjct: 2   IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAG 61

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSN- 168
             P     +            E +              G  + +  LK  G+ +AV S+ 
Sbjct: 62  EDPADLAELERLLYEAEALELEGLKPIP----------GVVELLEQLKARGIPLAVASSS 111

Query: 169 FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKA 228
                 ++L  L ++D FD +V + +V   KP P I+  A +++ V+    V + D   A
Sbjct: 112 PRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSP-A 170

Query: 229 DKQGANSLGIDCW 241
             Q A + G+   
Sbjct: 171 GIQAAKAAGMRVV 183

Length = 221

>gnl|CDD|233800 TIGR02247, HAD-1A3-hyp, epoxide hydrolase N-terminal domain-like phosphatase

 Score = 59.8 bits (145), Expect = 7e-11
 Identities = 54/199 (27%), Positives = 78/199 (39%), Gaps = 18/199 (9%)

Query: 49  AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKL-RYE 107
           A  AV+ D GG LL  +  V   + +     GL      +          PW     R E
Sbjct: 1   AIKAVIFDFGGVLLP-SPGVMRRWETERGLPGLKDFI--VTVNITGPDFNPWARTFERGE 57

Query: 108 GDGRPFWRLVVSEATGCTNDD-----YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVK 162
                F  L   E       D      F  +Y     GE   L      +I  L+  G K
Sbjct: 58  LTAEAFDGLFRHEYGLRLGHDVRIAPVFPLLY-----GENTKLRPSMMAAIKTLRAKGFK 112

Query: 163 VAVVSN--FDTRLRKL-LKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT 219
            A ++N        +  L   +++ LFDAVV S   G  KPDPRI++  L+++ V     
Sbjct: 113 TACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEEC 172

Query: 220 VHIGDDEKADKQGANSLGI 238
           V + DD  ++ + A +LGI
Sbjct: 173 VFL-DDLGSNLKPAAALGI 190

This model represents a small clade of sequences including C. elegans and mammalian sequences as well as a small number of bacteria. In eukaryotes, this domain exists as an N-terminal fusion to the soluble epoxide hydrolase enzyme and has recently been shown to be an active phosphatase, although the nature of the biological substrate is unclear. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. Length = 211

>gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 33/203 (16%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
           Y AV+ D  G +   A    + +  IA KYG++ D                 ++      
Sbjct: 1   YKAVIFDMDGVITDTAPLHAQAWKHIAAKYGISFD-----------------KQYNESLK 43

Query: 110 GRPFWRLVVS--EATGCTNDDYFEEVYEY-YAKGEAWH--LPH-------GAYQSILLLK 157
           G     ++ +  +  G       EE+++    K E +   L         G    +  LK
Sbjct: 44  GLSREDILRAILKLRGDGLSL--EEIHQLAERKNELYRELLRLTGVAVLPGIRNLLKRLK 101

Query: 158 DAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEAS 217
             G+ V + S+      ++L  L + D FDA+V +SEV   KP P  F  A + + V  +
Sbjct: 102 AKGIAVGLGSS-SKNAPRILAKLGLRDYFDAIVDASEVKNGKPHPETFLLAAELLGVPPN 160

Query: 218 RTVHIGDDEKADKQGANSLGIDC 240
             +   D   A  Q A + G+  
Sbjct: 161 ECIVFEDAL-AGVQAARAAGMFA 182

This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185

>gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase

 Score = 54.2 bits (131), Expect = 4e-09
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 145 LPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRI 204
           LP G    +  LK   +K+A+ S        +L+ L +ID FDA+V  +E+   KPDP I
Sbjct: 89  LP-GIKSLLADLKKNNIKIALASA-SKNAPTILEKLELIDYFDAIVDPAELKKGKPDPEI 146

Query: 205 FKAALDQMSVEASRTVHIGDDEKADKQGANSLGI 238
           F AA + + V  S  + I +D +A  +   + G+
Sbjct: 147 FLAAAEGLGVSPSECIGI-EDAQAGIEAIKAAGM 179

This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185

>gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein

 Score = 49.9 bits (119), Expect = 2e-07
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 148 GAYQSILLLKDAGVKVAVVSNFD-TRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFK 206
           G  + +  L+  GV  A+ +     R R LL+ L ++ LFD V+ S EV   KP P I +
Sbjct: 79  GVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVR 138

Query: 207 AALDQMSVEASRTVHIGD 224
            AL  + V     V +GD
Sbjct: 139 EALRLLDVPPEDAVMVGD 156

The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL 242
            C KP+P + +AAL+++ V+    V IGD +  D   A + GI   L
Sbjct: 1   VCGKPNPGMLRAALERLGVDPEECVMIGDSD-TDILAARAAGIRTIL 46

Length = 74

>gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional

 Score = 48.7 bits (117), Expect = 7e-07
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 156 LKDAGVKVAVVSNFDTRL-RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSV 214
           LK AG  +AVV+N  T     LL+ L + D F  V+    +  +KPDP     A +++ +
Sbjct: 105 LKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGL 164

Query: 215 EASRTVHIGDDEKADKQGANSLGIDC 240
           +    + +GD  + D Q A + G   
Sbjct: 165 DPEEMLFVGDS-RNDIQAARAAGCPS 189

Length = 226

>gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 16/127 (12%)

Query: 130 FEEVY-EYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNV------ 182
           F E+Y E YAK  +     GA + I   K+ G+KVAV S+ D    ++  D N+      
Sbjct: 146 FFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSAD----RIKVDANLAAAGLP 201

Query: 183 IDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL 242
           + +FDA+V +      KP P IF AA   + V  S  V I +D  A  Q A + G+ C  
Sbjct: 202 LSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI-EDALAGVQAARAAGMRC-- 258

Query: 243 WGIDVKT 249
             I V T
Sbjct: 259 --IAVTT 263

Length = 1057

>gnl|CDD|233517 TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, subfamily IIIA

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 14/92 (15%)

Query: 156 LKDAGVKVAVVSN---------FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFK 206
           LK+AG KV +V+N            R+ + L++L V    D +       C KP P +F 
Sbjct: 37  LKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV--PIDILYACP--HCRKPKPGMFL 92

Query: 207 AALDQMS-VEASRTVHIGDDEKADKQGANSLG 237
            AL + + ++   +V++GD +  D Q A   G
Sbjct: 93  EALKRFNEIDPEESVYVGDQDLTDLQAAKRAG 124

This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class III subfamilies are characterized by the lack of any domains located between either between the first and second conserved catalytic motifs (as in the Class I subfamilies, TIGR01493, TIGR01509, TIGR01488 and TIGR01494) or between the second and third conserved catalytic motifs (as in the Class II subfamilies, TIGR01460 and TIGR01484) of the superfamily domain. The IIIA subfamily contains five major clades: histidinol-phosphatase (TIGR01261) and histidinol-phosphatase-related protein (TIGR00213) which together form a subfamily (TIGR01656), DNA 3'-phosphatase (TIGR01663, TIGR01664), YqeG (TIGR01668) and YrbI (TIGR01670). In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme [Unknown function, Enzymes of unknown specificity]. Length = 132

>gnl|CDD|181872 PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Provisional

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 187 DAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGI 238
           D + +S ++G  KP+ RI++  L      A+  V   DD   + + AN+LGI
Sbjct: 129 DHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVFF-DDNADNIEAANALGI 179

Length = 199

>gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase

 Score = 44.1 bits (104), Expect = 4e-05
 Identities = 52/188 (27%), Positives = 74/188 (39%), Gaps = 24/188 (12%)

Query: 44  KSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEK 103
           K +KK    V+LD  GTLL     V +   +   KYG   D    ++  +     P    
Sbjct: 5   KPLKKLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDG---REAQKIVGKTPLEAA 61

Query: 104 LRYEGD-GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAW----HLPHGAYQSILLLKD 158
                D G P           C+ D++  E+    +  E W     LP GA + I  LK 
Sbjct: 62  ATVVEDYGLP-----------CSTDEFNSEITPLLS--EQWCNIKALP-GANRLIKHLKS 107

Query: 159 AGVKVAVVSNFDTR--LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEA 216
            GV +A+ SN        K+       + F  +V   EV   KP P IF  A  +++VE 
Sbjct: 108 HGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEP 167

Query: 217 SRTVHIGD 224
           S  + I D
Sbjct: 168 SNCLVIED 175

Length = 382

>gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 130 FEEVY-EYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLR-KLLKDL--NVIDL 185
           FEE   E Y  G    LP GA ++   L+ +G+KVA+ + FD     +LL+ L   V D 
Sbjct: 73  FEERLAEAYDDGPPVALP-GAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDD 131

Query: 186 FDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLG 237
            DAVV  S+V   +P P +   A++   V+  ++V +  D   D +   + G
Sbjct: 132 VDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAG 183

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220

>gnl|CDD|225090 COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only]

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 10/88 (11%)

Query: 156 LKDAGVKVAVVSNF-DTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSV 214
           LK+AG+KV VVSN  ++R+ +  + L V  ++ A         +KP  R F+ AL +M++
Sbjct: 58  LKEAGIKVVVVSNNKESRVARAAEKLGVPFIYRA---------KKPFGRAFRRALKEMNL 108

Query: 215 EASRTVHIGDDEKADKQGANSLGIDCWL 242
                V +GD    D  G N  G+   L
Sbjct: 109 PPEEVVMVGDQLFTDVLGGNRAGMRTIL 136

Length = 175

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 16/44 (36%), Positives = 27/44 (61%)

Query: 199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL 242
           KP P I++AAL+++ ++ S  + +GD    D  GA + G+D  L
Sbjct: 190 KPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLL 233

Length = 269

>gnl|CDD|233512 TIGR01656, Histidinol-ppas, histidinol-phosphate phosphatase family domain

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 24/121 (19%)

Query: 143 WHLPHGAYQSILLLKDAGVKVAVVSN----------------FDTRLRKLLKDLNVIDLF 186
           W L  GA  ++L L+ AG  V VV+N                 + R+ +LL+ L V    
Sbjct: 26  WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGV--AV 83

Query: 187 DAVVI-----SSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCW 241
           D V+      +    C KP P +   AL ++ V+ASR++ +GD    D Q A + G+   
Sbjct: 84  DGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRL-RDLQAARNAGLAAV 142

Query: 242 L 242
           L
Sbjct: 143 L 143

This domain is found in authentic histidinol-phosphate phosphatases which are sometimes found as stand-alone entities and sometimes as fusions with imidazoleglycerol-phosphate dehydratase (TIGR01261). Additionally, a family of proteins including YaeD from E. coli (TIGR00213) and various other proteins are closely related but may not have the same substrate specificity. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. Length = 147

>gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 2/84 (2%)

Query: 156 LKDAGVKVAVVSNFDTRL-RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSV 214
           L+  G+++ +V+N  T L R LL+ L +   F  ++    +   KP P     A +++ V
Sbjct: 97  LRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGV 156

Query: 215 EASRTVHIGDDEKADKQGANSLGI 238
              + V++GD    D Q A + G 
Sbjct: 157 APQQMVYVGDSR-VDIQAARAAGC 179

PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213

>gnl|CDD|236354 PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate phosphatase; Validated

 Score = 39.0 bits (92), Expect = 7e-04
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 28/123 (22%)

Query: 148 GAYQSILLLKDAGVKVAVVSN--------FDT--------RLRKLLKDLNVIDLFDAVVI 191
           G+ ++I  LK AG +V V +N        F          ++   L D     L D +  
Sbjct: 33  GSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG-RL-DGIYY 90

Query: 192 ---SSEVGCE--KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID 246
                E GC+  KP P +  +  ++++++ + +  +G D   D Q A + G+   L    
Sbjct: 91  CPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVG-DSLRDLQAAAAAGVTPVL---- 145

Query: 247 VKT 249
           V+T
Sbjct: 146 VRT 148

Length = 181

>gnl|CDD|130495 TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalogenase, type II

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 47/209 (22%), Positives = 76/209 (36%), Gaps = 38/209 (18%)

Query: 52  AVLLDAGGTLL---QLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEK-LRYE 107
           A++ D  GTL     + E   E Y                  G  +A +  W +K L Y 
Sbjct: 3   ALVFDVYGTLFDVHSVVERFAELYG-----------------GRGEALSQLWRQKQLEYS 45

Query: 108 ------GDGRPFWRLVVS--EATGCTNDDYFEEVYEYYAKGEAWHLPHGAY----QSILL 155
                 G    FW L                +E            LP   +      +  
Sbjct: 46  WLRTLMGPYADFWDLTREALRYLLGRLGLEDDESAADRLAEAYLRLP--PHPDVPAGLRA 103

Query: 156 LKDAGVKVAVVSNFDTRLRK-LLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSV 214
           LK+ G ++A++SN    + K L+K   + D FDAV+ +  V   KP P++++ AL+ + V
Sbjct: 104 LKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGV 163

Query: 215 EASRTVHIGDDEKADKQGANSLGID-CWL 242
                + +  +   D  GA   G    W+
Sbjct: 164 PPDEVLFVASN-PWDLGGAKKFGFKTAWV 191

Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. Length = 198

>gnl|CDD|223319 COG0241, HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 24/117 (20%)

Query: 143 WHLPHGAYQSILLLKDAGVKVAVVSN----------------FDTRLRKLLKDLNVIDLF 186
           +    G   ++L L+ AG K+ VV+N                   ++ K+L    V    
Sbjct: 30  FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVK--I 87

Query: 187 DAVVI---SSEVGCE--KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGI 238
           D ++      E  C+  KP P +  +AL + +++ SR+  +GD    D Q A + GI
Sbjct: 88  DGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL-TDLQAAENAGI 143

Length = 181

>gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKT 249
           KP    F  AL     E    V IGDD + D  GA     DC + GI V+T
Sbjct: 179 KPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQ----DCGMRGIQVRT 225

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257

>gnl|CDD|130526 TIGR01459, HAD-SF-IIA-hyp4, HAD-superfamily class IIA hydrolase, TIGR01459

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 199 KPDPRIFKAALDQMS-VEASRTVHIGDDEKADKQGANSLGID 239
           KP P IF  AL + S +  +R + +GD    D  GAN LGID
Sbjct: 195 KPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily model). Length = 242

>gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 148 GAYQSILLLKDAGVKVAVVSN--FDTRLRKLLKDLNVID-LFDAVVISSEVGCEKPDPRI 204
             Y+++  LK  G K+ +V+    DT    L   L  +D  FD V+   +V   KPDP  
Sbjct: 86  TVYETLKTLKKQGYKLGIVTTKMRDTVEMGL--KLTGLDEFFDVVITLDDVEHAKPDPEP 143

Query: 205 FKAALDQMSVEASRTVHIGD 224
              AL+ +  +    + +GD
Sbjct: 144 VLKALELLGAKPEEALMVGD 163

Length = 214

>gnl|CDD|233422 TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Superfamily Class (subfamily) IIA

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 199 KPDPRIFKAALDQMSVEASRT-VHIGDDEKADKQGANSLGIDCWLW 243
           KP P I++AAL+ +     R  V +GD+ + D  GA + G D  L 
Sbjct: 188 KPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFD-TLL 232

This model represents one structural subclass of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The classes are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Class I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Class II consists of sequences in which the capping domain is found between the second and third motifs. Class III sequences have no capping domain in iether of these positions. The Class IIA capping domain is predicted by PSI-PRED to consist of a mixed alpha-beta fold with the basic pattern: Helix-Helix-Helix-Sheet-Helix-Loop-Sheet-Helix-Sheet- Helix. Presently, this subfamily encompasses a single equivalog model (TIGR01452) for the eukaryotic phosphoglycolate phosphatase, as well as four hypothetical equivalogs covering closely related sequences (TIGR01456 and TIGR01458 in eukaryotes, TIGR01457 in gram positive bacteria and TIGR01459 in gram negative bacteria). The Escherishia coli NagD gene and the Bacillus subtilus AraL gene are members of this subfamily but are not members of the any of the presently defined equivalogs within it. NagD is part of the NAG operon responsible for N-acetylglucosamine metabolism. The function of this gene is unknown. Genes from several organisms have been annotated as NagD, or NagD-like. However, without data on the presence of other members of this pathway, (such as in the case of Yersinia pestis) these assignments should not be given great weight. The AraL gene is similar: it is part of the L-arabinose operon, but the function is unknown. A gene from Halobacterium has been annotated as AraL, but no other Ara operon genes have been annotated. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant [Unknown function, Enzymes of unknown specificity]. Length = 236

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	261
PRK13288	214	pyrophosphatase PpaX; Provisional	99.97
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.97
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.97
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.97
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.97
COG0546	220	Gph Predicted phosphatases [General function predi	99.97
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.97
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.97
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.97
PRK09449	224	dUMP phosphatase; Provisional	99.97
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.96
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.96
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.96
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.96
PLN02575	381	haloacid dehalogenase-like hydrolase	99.96
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.96
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.96
PRK11587	218	putative phosphatase; Provisional	99.96
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.96
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.96
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.96
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.96
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.96
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.96
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.95
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.95
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.95
PLN02940	382	riboflavin kinase	99.95
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.95
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.95
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.95
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.95
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.95
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.94
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.94
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.94
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.93
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.93
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.93
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.92
PLN02811	220	hydrolase	99.91
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.91
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.9
PHA02597	197	30.2 hypothetical protein; Provisional	99.89
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.89
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.89
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.88
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.87
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.87
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.86
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.86
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.85
PLN02954	224	phosphoserine phosphatase	99.84
PRK06769	173	hypothetical protein; Validated	99.84
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.84
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.84
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.83
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.83
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.82
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.81
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.81
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.79
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.78
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.76
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.76
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.75
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.75
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.74
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.73
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.73
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.72
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.71
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.7
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.69
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.69
PHA02530	300	pseT polynucleotide kinase; Provisional	99.68
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.67
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.67
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.67
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.64
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.63
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.63
PLN02645	311	phosphoglycolate phosphatase	99.61
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.6
PRK11590	211	hypothetical protein; Provisional	99.6
PRK10444	248	UMP phosphatase; Provisional	99.59
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.57
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.55
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.53
COG4229	229	Predicted enolase-phosphatase [Energy production a	99.53
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.52
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.51
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.49
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.49
PRK08238	479	hypothetical protein; Validated	99.48
PTZ00445	219	p36-lilke protein; Provisional	99.48
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.45
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	99.42
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.42
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	99.41
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	99.39
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.39
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.34
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	99.33
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	99.32
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	99.32
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.29
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	99.28
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.28
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	99.23
PRK10513	270	sugar phosphate phosphatase; Provisional	99.22
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.19
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.19
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.19
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	99.18
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	99.16
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	99.12
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	99.11
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	99.07
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	99.06
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	99.05
PLN02887	580	hydrolase family protein	99.04
PRK10976	266	putative hydrolase; Provisional	99.03
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	98.97
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.97
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.94
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	98.93
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	98.93
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	98.9
COG4359	220	Uncharacterized conserved protein [Function unknow	98.89
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.88
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	98.87
COG4996	164	Predicted phosphatase [General function prediction	98.83
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.82
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.81
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.72
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.7
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	98.6
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	98.59
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	98.59
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.58
PRK10671	834	copA copper exporting ATPase; Provisional	98.55
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	98.52
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	98.51
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	98.51
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	98.5
PTZ00174	247	phosphomannomutase; Provisional	98.44
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	98.41
PLN02382	413	probable sucrose-phosphatase	98.4
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	98.32
COG3700	237	AphA Acid phosphatase (class B) [General function	98.29
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.23
COG4087	152	Soluble P-type ATPase [General function prediction	98.21
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.17
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	98.17
PLN02177	497	glycerol-3-phosphate acyltransferase	98.16
COG5663	194	Uncharacterized conserved protein [Function unknow	98.15
COG2503	274	Predicted secreted acid phosphatase [General funct	98.12
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	98.09
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	98.09
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	98.07
PLN02645	311	phosphoglycolate phosphatase	98.01
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	97.97
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.95
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.92
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.91
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	97.91
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.88
PRK14010	673	potassium-transporting ATPase subunit B; Provision	97.8
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	97.76
PRK01122	679	potassium-transporting ATPase subunit B; Provision	97.72
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	97.7
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.64
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	97.56
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	97.55
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	97.43
KOG1618	389	consensus Predicted phosphatase [General function	97.41
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	97.38
PRK15122	903	magnesium-transporting ATPase; Provisional	97.35
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	97.33
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	97.32
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	97.26
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	97.26
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	97.24
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	97.24
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	97.21
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	97.16
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	96.96
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	96.93
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	96.83
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	96.82
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.82
PLN02499	498	glycerol-3-phosphate acyltransferase	96.8
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	96.78
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	96.75
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	96.71
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.59
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	96.56
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	96.54
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	96.29
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	96.29
COG4030	315	Uncharacterized protein conserved in archaea [Func	96.26
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	96.26
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	96.15
KOG3128	298	consensus Uncharacterized conserved protein [Funct	96.14
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	96.01
PRK10444	248	UMP phosphatase; Provisional	96.0
PLN02423	245	phosphomannomutase	95.97
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	95.89
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	95.52
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	95.51
PLN02423	245	phosphomannomutase	95.38
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	94.94
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	94.79
COG4850	373	Uncharacterized conserved protein [Function unknow	94.69
PLN03017	366	trehalose-phosphatase	94.34
PLN02580	384	trehalose-phosphatase	94.33
PLN02151	354	trehalose-phosphatase	93.84
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	93.53
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	93.11
KOG4549	144	consensus Magnesium-dependent phosphatase [General	93.04
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	92.83
KOG2116	738	consensus Protein involved in plasmid maintenance/	92.18
PLN02580	384	trehalose-phosphatase	92.03
KOG3107	468	consensus Predicted haloacid dehalogenase-like hyd	91.99
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	91.84
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	90.74
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	90.63
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	90.44
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	90.39
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	90.33
PLN03190	1178	aminophospholipid translocase; Provisional	89.68
CHL00162	267	thiG thiamin biosynthesis protein G; Validated	89.28
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	88.89
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	88.55
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	88.53
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	88.3
PRK08883	220	ribulose-phosphate 3-epimerase; Provisional	88.15
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	87.82
cd04728	248	ThiG Thiazole synthase (ThiG) is the tetrameric en	87.44
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	87.38
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	87.2
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	86.69
PLN02334	229	ribulose-phosphate 3-epimerase	86.66
PRK01158	230	phosphoglycolate phosphatase; Provisional	86.53
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	86.15
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	85.86
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	85.59
PF05690	247	ThiG: Thiazole biosynthesis protein ThiG; InterPro	85.51
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	85.5
PRK08005	210	epimerase; Validated	84.87
PRK10976	266	putative hydrolase; Provisional	84.38
PRK11840	326	bifunctional sulfur carrier protein/thiazole synth	84.13
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	83.9
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	83.82
PRK00208	250	thiG thiazole synthase; Reviewed	83.73
KOG1618	389	consensus Predicted phosphatase [General function	83.04
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	83.02
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	82.88
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	82.42
COG2022	262	ThiG Uncharacterized enzyme of thiazole biosynthes	82.37
PF06437	408	ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0	81.47
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	80.71

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.97  E-value=1e-29  Score=200.71  Aligned_cols=187  Identities=19%  Similarity=0.252  Sum_probs=144.0

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCC-CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLN-VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      |++++|+||+||||+|+...+..++.+++++++.. .+.+.....    .+...          ...+..    ......
T Consensus         1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~----~G~~~----------~~~~~~----~~~~~~   62 (214)
T PRK13288          1 MKINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPF----IGPSL----------HDTFSK----IDESKV   62 (214)
T ss_pred             CCccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHH----hCcCH----------HHHHHh----cCHHHH
Confidence            36899999999999999999999999999998764 454444332    22111          111111    111112


Q ss_pred             hHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          127 DDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       127 ~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      +.+...+.+.+..  .....++||+.++|+.|+++|++++|+||+... +...++.+|+..+|+.++++++.+..||+|+
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~  142 (214)
T PRK13288         63 EEMITTYREFNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPE  142 (214)
T ss_pred             HHHHHHHHHHHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcH
Confidence            2222333332222  123578999999999999999999999998877 7899999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      .|..+++++|++|+++++|||+ .+|+++|+++|+.++++..+.....++
T Consensus       143 ~~~~~~~~~~~~~~~~~~iGDs-~~Di~aa~~aG~~~i~v~~g~~~~~~l  191 (214)
T PRK13288        143 PVLKALELLGAKPEEALMVGDN-HHDILAGKNAGTKTAGVAWTIKGREYL  191 (214)
T ss_pred             HHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHCCCeEEEEcCCCCCHHHH
Confidence            9999999999999999999999 799999999999999987775544444

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.97  E-value=1.2e-29  Score=198.76  Aligned_cols=192  Identities=40%  Similarity=0.703  Sum_probs=142.9

Q ss_pred             cEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcC---CCcccccc-CCCChhHHHHHHHHhcC---
Q 024886           51 DAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAA---PWPEKLRY-EGDGRPFWRLVVSEATG---  123 (261)
Q Consensus        51 k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~---  123 (261)
                      |+|+||+||||+|+...+..++.++++++|++.+.++....+...+..   .+...... ......++...+.....   
T Consensus         1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   80 (203)
T TIGR02252         1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG   80 (203)
T ss_pred             CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999999999987765544333222211   11111101 11122233333322211   


Q ss_pred             -CC---chHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCC
Q 024886          124 -CT---NDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEK  199 (261)
Q Consensus       124 -~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~K  199 (261)
                       ..   ..+....+.+.+.....+.++||+.++|+.|++.|++++|+||++..+...++.+|+..+|+.++++++.+..|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~l~~~~l~~~fd~i~~s~~~~~~K  160 (203)
T TIGR02252        81 VPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSRLRGLLEALGLLEYFDFVVTSYEVGAEK  160 (203)
T ss_pred             CCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHCCcHHhcceEEeecccCCCC
Confidence             11   12333444444444444688999999999999999999999998876778899999999999999999999999


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      |+|++|..+++++|++|+++++|||+..+|+++|+++|+.+|+
T Consensus       161 P~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       161 PDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             CCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence            9999999999999999999999999944899999999999874

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.97  E-value=2.3e-29  Score=200.44  Aligned_cols=183  Identities=22%  Similarity=0.231  Sum_probs=139.2

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCC-CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLN-VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      ++++|+||+||||+|+...+..++..+++++|.+ .+.+.....+....              ................+
T Consensus        11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~--------------~~~~~~~~~~~~~~~~~   76 (229)
T PRK13226         11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGA--------------RAMLAVAFPELDAAARD   76 (229)
T ss_pred             cCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHH--------------HHHHHHHhccCChHHHH
Confidence            5689999999999999999999999999999986 45444332221110              00111100000000112


Q ss_pred             HHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHH
Q 024886          128 DYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRI  204 (261)
Q Consensus       128 ~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~  204 (261)
                      ++...+.+.|...  ...+++||+.++|+.|+++|++++|+||+... ...+++.+|+..+|+.++++++.+..||+|++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~  156 (229)
T PRK13226         77 ALIPEFLQRYEALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLP  156 (229)
T ss_pred             HHHHHHHHHHHHhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHH
Confidence            3333334444321  22588999999999999999999999998877 67889999999999999999888889999999


Q ss_pred             HHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          205 FKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       205 ~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |..+++++|++|++|++|||+ .+|+++|+++|+.++++..+
T Consensus       157 ~~~~~~~l~~~p~~~l~IGDs-~~Di~aA~~aG~~~i~v~~g  197 (229)
T PRK13226        157 LLVAAERIGVAPTDCVYVGDD-ERDILAARAAGMPSVAALWG  197 (229)
T ss_pred             HHHHHHHhCCChhhEEEeCCC-HHHHHHHHHCCCcEEEEeec
Confidence            999999999999999999999 89999999999999887554

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.97  E-value=4.3e-29  Score=201.06  Aligned_cols=185  Identities=18%  Similarity=0.228  Sum_probs=139.2

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCC----CCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGL----NVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT  122 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (261)
                      ..++++|+||+||||+|+...+..+|.++++++|.    +++.+....   ...+...          ...+........
T Consensus        19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~---~~~G~~~----------~~~~~~~~~~~~   85 (248)
T PLN02770         19 LAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVE---NIAGKHN----------EDIALGLFPDDL   85 (248)
T ss_pred             cCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHH---HcCCCCH----------HHHHHHHcCcch
Confidence            45689999999999999999999999999999864    333332221   1111111          111111110000


Q ss_pred             CCCchHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCC
Q 024886          123 GCTNDDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEK  199 (261)
Q Consensus       123 ~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~K  199 (261)
                      . ...++.....+.|..  .....++||+.++|+.|+++|++++|+||+... +...++.+|+.++|+.++++++++.+|
T Consensus        86 ~-~~~~~~~~~~~~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~K  164 (248)
T PLN02770         86 E-RGLKFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAK  164 (248)
T ss_pred             h-hHHHHHHHHHHHHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCC
Confidence            0 001112222223322  123588999999999999999999999999877 799999999999999999999999999


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |+|+.|..+++++|++|++|++|||+ ..|+++|+++|+.++++..+
T Consensus       165 P~p~~~~~a~~~~~~~~~~~l~vgDs-~~Di~aA~~aGi~~i~v~~g  210 (248)
T PLN02770        165 PHPDPYLKALEVLKVSKDHTFVFEDS-VSGIKAGVAAGMPVVGLTTR  210 (248)
T ss_pred             CChHHHHHHHHHhCCChhHEEEEcCC-HHHHHHHHHCCCEEEEEeCC
Confidence            99999999999999999999999999 79999999999999999765

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.97  E-value=7.4e-29  Score=200.69  Aligned_cols=193  Identities=13%  Similarity=0.167  Sum_probs=139.3

Q ss_pred             ccEEEEccCCcccccccc-HHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC-ch
Q 024886           50 YDAVLLDAGGTLLQLAEP-VEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT-ND  127 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  127 (261)
                      +++|+||+||||+|+... +..++.++++++|.+++.++....    .+......+............+. ...+.. ..
T Consensus         2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   76 (253)
T TIGR01422         2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGP----MGLGKWDHIRALLKMPAVAERWR-AKFGRLPTE   76 (253)
T ss_pred             ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHh----cCccHHHHHHHHhcCHHHHHHHH-HHhCCCCCH
Confidence            689999999999998653 577999999999987766654322    22111111111000111111111 111111 11


Q ss_pred             ----HHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc-ceEEecCCCCCCC
Q 024886          128 ----DYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF-DAVVISSEVGCEK  199 (261)
Q Consensus       128 ----~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f-~~i~~~~~~~~~K  199 (261)
                          .+...+.+.+..  .....++||+.++|+.|+++|++++|+||++.. ++.+++.+|+..+| +.++++++++..|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~K  156 (253)
T TIGR01422        77 ADIEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGR  156 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCC
Confidence                122222222211  123588999999999999999999999999877 78899999999885 9999999999999


Q ss_pred             CCHHHHHHHHHHcCCC-CCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          200 PDPRIFKAALDQMSVE-ASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~-~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      |+|++|..+++++|+. |++|++|||+ .+|+++|+++|+.+|+|..+..
T Consensus       157 P~p~~~~~a~~~l~~~~~~~~l~IGDs-~~Di~aA~~aGi~~i~v~~g~~  205 (253)
T TIGR01422       157 PAPWMALKNAIELGVYDVAACVKVGDT-VPDIEEGRNAGMWTVGLILSSN  205 (253)
T ss_pred             CCHHHHHHHHHHcCCCCchheEEECCc-HHHHHHHHHCCCeEEEEecCCc
Confidence            9999999999999995 9999999999 7999999999999999977754

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.97  E-value=3.7e-29  Score=197.89  Aligned_cols=185  Identities=26%  Similarity=0.347  Sum_probs=141.9

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCC-CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCC--
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLN-VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGC--  124 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  124 (261)
                      |++++|+||+||||+|+...+..+++..++++|.+ .+.+.+...+.....              .............  
T Consensus         2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~--------------~~~~~~~~~~~~~~~   67 (220)
T COG0546           2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLD--------------ELIERLLGEADEEAA   67 (220)
T ss_pred             CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHH--------------HHHHHHhccccchhH
Confidence            57899999999999999999999999999999998 566555443221111              0001000000000  


Q ss_pred             --CchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCC
Q 024886          125 --TNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPD  201 (261)
Q Consensus       125 --~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~  201 (261)
                        ..+.+.+...+.+.......++||+.++|..|++.|++++|+||.+.. ++..++.+|+..+|+.+++.++....||+
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~  147 (220)
T COG0546          68 AELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPD  147 (220)
T ss_pred             HHHHHHHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcC
Confidence              011222222222322212378999999999999999999999998877 79999999999999999998888899999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      |..+..+++.+|++|++++||||+ .+|+++|+++|+.+++|..+.
T Consensus       148 P~~l~~~~~~~~~~~~~~l~VGDs-~~Di~aA~~Ag~~~v~v~~g~  192 (220)
T COG0546         148 PEPLLLLLEKLGLDPEEALMVGDS-LNDILAAKAAGVPAVGVTWGY  192 (220)
T ss_pred             HHHHHHHHHHhCCChhheEEECCC-HHHHHHHHHcCCCEEEEECCC
Confidence            999999999999998899999999 899999999999998887763

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.97  E-value=5.9e-29  Score=197.28  Aligned_cols=189  Identities=21%  Similarity=0.282  Sum_probs=145.0

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC---c
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT---N  126 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  126 (261)
                      +|+|+||+||||+|+...+..++.++++++|.+.+..+....+   .+.          .....++..... .+..   .
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~g~----------~~~~~~~~~~~~-~~~~~~~~   66 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAW---MGQ----------SKIEAIRALLAL-DGADEAEA   66 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhh---cCC----------CHHHHHHHHHhc-cCCCHHHH
Confidence            5789999999999999999999999999999887665544311   111          112222222221 1111   1


Q ss_pred             hHHHHHHHHHHhh---CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc--cccceEEecCCCCCCCC
Q 024886          127 DDYFEEVYEYYAK---GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI--DLFDAVVISSEVGCEKP  200 (261)
Q Consensus       127 ~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~--~~f~~i~~~~~~~~~Kp  200 (261)
                      +.+...+.+.+..   .....++||+.++|+.|+++|++++|+||+... +..+++.+|+.  .+|+.++++++.+..||
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP  146 (220)
T TIGR03351        67 QAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRP  146 (220)
T ss_pred             HHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCC
Confidence            2222333333322   122589999999999999999999999999877 79999999998  99999999999989999


Q ss_pred             CHHHHHHHHHHcCCC-CCcEEEEcCCchhhhHHHHhCCCeE-EEECCCCCChHHH
Q 024886          201 DPRIFKAALDQMSVE-ASRTVHIGDDEKADKQGANSLGIDC-WLWGIDVKTFSDV  253 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~-~~~~l~iGD~~~~Di~~a~~~G~~~-i~v~~~~~~~~el  253 (261)
                      +|++|..+++++|+. |++|++|||+ ..|+++|+++|+.+ +++.++..+.+++
T Consensus       147 ~p~~~~~a~~~~~~~~~~~~~~igD~-~~Di~aa~~aG~~~~i~~~~g~~~~~~~  200 (220)
T TIGR03351       147 APDLILRAMELTGVQDVQSVAVAGDT-PNDLEAGINAGAGAVVGVLTGAHDAEEL  200 (220)
T ss_pred             CHHHHHHHHHHcCCCChhHeEEeCCC-HHHHHHHHHCCCCeEEEEecCCCcHHHH
Confidence            999999999999997 7999999999 79999999999999 8887765544444

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.97  E-value=1.2e-28  Score=198.70  Aligned_cols=182  Identities=18%  Similarity=0.265  Sum_probs=137.2

Q ss_pred             cccEEEEccCCccccccc-cHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCC-Cc
Q 024886           49 AYDAVLLDAGGTLLQLAE-PVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGC-TN  126 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  126 (261)
                      .+|+|||||||||+|+.. .+..+|.++++++|..++.++...   ...+...          ...+..+....... ..
T Consensus        23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~---~~~G~~~----------~~~~~~l~~~~~~~~~~   89 (260)
T PLN03243         23 GWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLK---RAEGMKN----------EQAISEVLCWSRDFLQM   89 (260)
T ss_pred             CceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHH---HhcCCCH----------HHHHHHHhccCCCHHHH
Confidence            589999999999999964 556799999999999876654332   1222111          11111111000000 01


Q ss_pred             hHHHHHHHHHHh--hCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          127 DDYFEEVYEYYA--KGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       127 ~~~~~~~~~~~~--~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      ..+.......+.  ......++||+.++|+.|++.|++++|+||+... +..+++.+|+..+|+.++++++...+||+|+
T Consensus        90 ~~l~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe  169 (260)
T PLN03243         90 KRLAIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPE  169 (260)
T ss_pred             HHHHHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHH
Confidence            122222222221  1123578999999999999999999999998877 7899999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      +|..+++++|++|++|++|||+ ..|+++|+++|+.++++.
T Consensus       170 ~~~~a~~~l~~~p~~~l~IgDs-~~Di~aA~~aG~~~i~v~  209 (260)
T PLN03243        170 MFMYAAERLGFIPERCIVFGNS-NSSVEAAHDGCMKCVAVA  209 (260)
T ss_pred             HHHHHHHHhCCChHHeEEEcCC-HHHHHHHHHcCCEEEEEe
Confidence            9999999999999999999999 899999999999999885

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.97  E-value=1.1e-28  Score=195.87  Aligned_cols=193  Identities=25%  Similarity=0.316  Sum_probs=139.5

Q ss_pred             ccEEEEccCCccccccccHHHHHHHH---HHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASI---ARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      +++|+||+||||+|+...+..++..+   +.++|.+++.++....+...........   ..............   ...
T Consensus         2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~   75 (221)
T TIGR02253         2 IKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNY---PTHFDYLIRRLWEE---YNP   75 (221)
T ss_pred             ceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhcccc---CcchHHHHHHHhhh---cCH
Confidence            68999999999999998877776655   4566777777666554443222111000   00001111111110   111


Q ss_pred             hHHHHHHHHHHhh-CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHH
Q 024886          127 DDYFEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRI  204 (261)
Q Consensus       127 ~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~  204 (261)
                      ....+.....+.. .....++||+.++|+.|+++|++++|+||+... +...++.+|+..+|+.++++++.+..||+|++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~  155 (221)
T TIGR02253        76 KLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKI  155 (221)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHH
Confidence            1111112121111 122478999999999999999999999999876 78899999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          205 FKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       205 ~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      |..+++++|++++++++|||+..+|+++|+++|+.+|++.++..
T Consensus       156 ~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~  199 (221)
T TIGR02253       156 FYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKS  199 (221)
T ss_pred             HHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCC
Confidence            99999999999999999999943899999999999999987754

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK09449 dUMP phosphatase; Provisional

Probab=99.97  E-value=2.6e-28  Score=194.13  Aligned_cols=192  Identities=25%  Similarity=0.332  Sum_probs=135.5

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHH---HHHHhcCC
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRL---VVSEATGC  124 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  124 (261)
                      |++|+|+||+||||+|..  ...++.++++++|...+.+.... +.......+............+...   ......+.
T Consensus         1 m~~k~iiFDlDGTLid~~--~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (224)
T PRK09449          1 MKYDWILFDADETLFHFD--AFAGLQRMFSRYGVDFTAEDFQD-YQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNV   77 (224)
T ss_pred             CCccEEEEcCCCchhcch--hhHHHHHHHHHhCCCCcHHHHHH-HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCC
Confidence            368999999999999843  35678888889998765544322 1111000011110000111111111   11222233


Q ss_pred             CchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          125 TNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      ...++...+.+.+...  ..++||+.++|+.|+ +|++++|+||+... +...++.+|+..+|+.++++++.+..||+|+
T Consensus        78 ~~~~~~~~~~~~~~~~--~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~  154 (224)
T PRK09449         78 TPGELNSAFLNAMAEI--CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVA  154 (224)
T ss_pred             CHHHHHHHHHHHHhhc--CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHH
Confidence            3334444444444332  478999999999999 57999999998877 6888999999999999999999999999999


Q ss_pred             HHHHHHHHcCCC-CCcEEEEcCCchhhhHHHHhCCCeEEEECC
Q 024886          204 IFKAALDQMSVE-ASRTVHIGDDEKADKQGANSLGIDCWLWGI  245 (261)
Q Consensus       204 ~~~~~~~~l~~~-~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~  245 (261)
                      +|..+++++|+. +++|++|||+..+|+++|+++|+.++++..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~  197 (224)
T PRK09449        155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNA  197 (224)
T ss_pred             HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence            999999999985 479999999933799999999999999874

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.96  E-value=1e-28  Score=191.76  Aligned_cols=210  Identities=38%  Similarity=0.569  Sum_probs=173.2

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcC---CCccccccCC--CChhHHHHHHHHh
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAA---PWPEKLRYEG--DGRPFWRLVVSEA  121 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~  121 (261)
                      .+.+++|+||++|||+.........|.++.+.+|++.+.......+...+..   ....+..+.+  ...++|..++...
T Consensus         4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~   83 (237)
T KOG3085|consen    4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVEST   83 (237)
T ss_pred             ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHH
Confidence            4578999999999999988888899999999999997777666666665542   2223333333  6778888777777


Q ss_pred             cCCCchHHHHHHHHH-----HhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCC
Q 024886          122 TGCTNDDYFEEVYEY-----YAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSE  194 (261)
Q Consensus       122 ~~~~~~~~~~~~~~~-----~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~  194 (261)
                      ......+..+...++     |...  ..+.+.+++.++++.||+.|..++++||.+...+..+...|+..+||.++.|.+
T Consensus        84 f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~~~l~~~~l~~~fD~vv~S~e  163 (237)
T KOG3085|consen   84 FGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLRLLLLPLGLSAYFDFVVESCE  163 (237)
T ss_pred             hccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHHHHhhccCHHHhhhhhhhhhh
Confidence            776555555555532     2222  357888899999999999999999999999988899999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      .+.-||+|.+|+.+++++++.|++|++|||++.||+++|+++||.+++|.+......++...
T Consensus       164 ~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~~~  225 (237)
T KOG3085|consen  164 VGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELEYK  225 (237)
T ss_pred             hccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhhhc
Confidence            99999999999999999999999999999999999999999999999999887766665543

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.96  E-value=2.1e-28  Score=199.44  Aligned_cols=196  Identities=12%  Similarity=0.121  Sum_probs=139.0

Q ss_pred             cccccEEEEccCCcccccccc-HHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC
Q 024886           47 KKAYDAVLLDAGGTLLQLAEP-VEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (261)
                      ||++|+|+||+||||+|+... ...+|.++++++|.+++.++....    .+......+............+ ....+..
T Consensus         1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~-~~~~g~~   75 (267)
T PRK13478          1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGP----MGLGKWDHIRALLKMPRVAARW-QAVFGRL   75 (267)
T ss_pred             CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHh----cCCCHHHHHHHHHhcHHHHHHH-HHHhCCC
Confidence            467899999999999998654 367999999999987765543321    2211101000000000011111 1112211


Q ss_pred             -c----hHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc-ceEEecCCCC
Q 024886          126 -N----DDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF-DAVVISSEVG  196 (261)
Q Consensus       126 -~----~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f-~~i~~~~~~~  196 (261)
                       .    .++...+.+.+..  .....++||+.++|+.|+++|++++|+||.... +..+++.+++..+| +.++++++.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~  155 (267)
T PRK13478         76 PTEADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVP  155 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCC
Confidence             1    1222222222221  123578999999999999999999999998887 68889988887774 8999999999


Q ss_pred             CCCCCHHHHHHHHHHcCCC-CCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          197 CEKPDPRIFKAALDQMSVE-ASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~-~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      ..||+|++|..+++++|+. +++|++|||+ .+|+++|+++|+.+|+|..+..
T Consensus       156 ~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs-~~Di~aA~~aG~~~i~v~~g~~  207 (267)
T PRK13478        156 AGRPYPWMALKNAIELGVYDVAACVKVDDT-VPGIEEGLNAGMWTVGVILSGN  207 (267)
T ss_pred             CCCCChHHHHHHHHHcCCCCCcceEEEcCc-HHHHHHHHHCCCEEEEEccCcc
Confidence            9999999999999999996 6999999999 7999999999999999987754

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.96  E-value=2.4e-28  Score=194.02  Aligned_cols=186  Identities=15%  Similarity=0.229  Sum_probs=142.8

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc--CCC
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT--GCT  125 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  125 (261)
                      +++++|+||+||||+|+...+..++.++++++|.+.+......   ...+..          .......+.....  ...
T Consensus         5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~---~~~g~~----------~~~~~~~~~~~~~~~~~~   71 (222)
T PRK10826          5 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELP---DTLGLR----------IDQVVDLWYARQPWNGPS   71 (222)
T ss_pred             ccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHH---HhhCCC----------HHHHHHHHHHhcCCCCCC
Confidence            3589999999999999999999999999999998766522221   111110          0111111111111  112


Q ss_pred             chHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCH
Q 024886          126 NDDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       126 ~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~  202 (261)
                      ...+.....+.+.+  .....++||+.++|+.|+++|++++|+||+... +..+++.+|+..+|+.++++++.+.+||+|
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~  151 (222)
T PRK10826         72 RQEVVQRIIARVISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHP  151 (222)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCH
Confidence            22333333333322  123589999999999999999999999998877 789999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +.|..+++++|++|++|++|||+ .+|+++|+++|+.++++.++.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~igDs-~~Di~aA~~aG~~~i~v~~~~  195 (222)
T PRK10826        152 EVYLNCAAKLGVDPLTCVALEDS-FNGMIAAKAARMRSIVVPAPE  195 (222)
T ss_pred             HHHHHHHHHcCCCHHHeEEEcCC-hhhHHHHHHcCCEEEEecCCc
Confidence            99999999999999999999999 799999999999999998764

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.96  E-value=1.8e-28  Score=193.62  Aligned_cols=183  Identities=22%  Similarity=0.311  Sum_probs=143.8

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC--c
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT--N  126 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  126 (261)
                      +++++||||||||+|+...+.++|.++++++|+.++.+.....+...              ....+...........  .
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~--------------~~~~~~~~~~~~~~~~~~~   66 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGG--------------IARIIDLLRKLAAGEDPAD   66 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCC--------------hHHHHHHHHHHhcCCcccC
Confidence            46899999999999999999999999999999998876655432110              0111122222222211  1


Q ss_pred             hHHHHHHHH-HH-hhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          127 DDYFEEVYE-YY-AKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       127 ~~~~~~~~~-~~-~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      ....+.... .. ......+++||+.++|+.|+++|+++++.|+++.. +...++.+|+.++|+.+++++++..+||+|+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd  146 (221)
T COG0637          67 LAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPD  146 (221)
T ss_pred             HHHHHHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCH
Confidence            111222111 11 22334689999999999999999999999998877 7999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      .|..+++++|++|++|++|+|+ .+++++|+++||.+|.+.++
T Consensus       147 ~yL~Aa~~Lgv~P~~CvviEDs-~~Gi~Aa~aAGm~vv~v~~~  188 (221)
T COG0637         147 IYLLAAERLGVDPEECVVVEDS-PAGIQAAKAAGMRVVGVPAG  188 (221)
T ss_pred             HHHHHHHHcCCChHHeEEEecc-hhHHHHHHHCCCEEEEecCC
Confidence            9999999999999999999999 89999999999999999873

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.96  E-value=1.4e-28  Score=205.14  Aligned_cols=184  Identities=15%  Similarity=0.222  Sum_probs=140.8

Q ss_pred             cccEEEEccCCccccccc-cHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc-CCCc
Q 024886           49 AYDAVLLDAGGTLLQLAE-PVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT-GCTN  126 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  126 (261)
                      ..++|||||||||+|+.. .+..+|.++++++|.+.+..+...   ...+...          ...+..+..... ....
T Consensus       130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~---~~~G~~~----------~~~l~~ll~~~~~~~~~  196 (381)
T PLN02575        130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILR---RVEGMKN----------EQAISEVLCWSRDPAEL  196 (381)
T ss_pred             CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHH---HhcCCCH----------HHHHHHHhhccCCHHHH
Confidence            579999999999999876 455699999999998876554332   2222111          111122111000 0011


Q ss_pred             hHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          127 DDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       127 ~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      +.+.....+.|.+.  ....++||+.++|+.|+++|++++|+||.... +..+++.+|+..+|+.++++++....||+|+
T Consensus       197 e~l~~~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Pe  276 (381)
T PLN02575        197 RRMATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPE  276 (381)
T ss_pred             HHHHHHHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHH
Confidence            22333333333321  22578999999999999999999999999877 7999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +|..+++++|++|++|++|||+ ..|+++|+++|+.+|++..+
T Consensus       277 ifl~A~~~lgl~Peecl~IGDS-~~DIeAAk~AGm~~IgV~~~  318 (381)
T PLN02575        277 MFIYAAQLLNFIPERCIVFGNS-NQTVEAAHDARMKCVAVASK  318 (381)
T ss_pred             HHHHHHHHcCCCcccEEEEcCC-HHHHHHHHHcCCEEEEECCC
Confidence            9999999999999999999999 79999999999999999764

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.96  E-value=1.2e-28  Score=192.36  Aligned_cols=115  Identities=23%  Similarity=0.344  Sum_probs=103.8

Q ss_pred             HHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHH
Q 024886          129 YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKA  207 (261)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~  207 (261)
                      ..+.+.+.+..   ..++||+.++|+.|+++|++++|+||++.. +...++.+|+..+|+.++++++++..||++++|..
T Consensus        80 ~~~~~~~~~~~---~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~  156 (198)
T TIGR01428        80 AADRLAEAYLR---LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQL  156 (198)
T ss_pred             HHHHHHHHHhc---CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHH
Confidence            34445555543   478999999999999999999999999877 78899999999999999999999999999999999


Q ss_pred             HHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          208 ALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       208 ~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +++++|++|+++++|||+ ..|+++|+++|+.++++.++.
T Consensus       157 ~~~~~~~~p~~~~~vgD~-~~Di~~A~~~G~~~i~v~r~~  195 (198)
T TIGR01428       157 ALEALGVPPDEVLFVASN-PWDLGGAKKFGFKTAWVNRPG  195 (198)
T ss_pred             HHHHhCCChhhEEEEeCC-HHHHHHHHHCCCcEEEecCCC
Confidence            999999999999999999 699999999999999998754

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.96  E-value=7.8e-28  Score=189.95  Aligned_cols=181  Identities=21%  Similarity=0.240  Sum_probs=138.0

Q ss_pred             EEEccCCccccccccHHHHHHHHHHHhCCC-CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcC-CC---ch
Q 024886           53 VLLDAGGTLLQLAEPVEETYASIARKYGLN-VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG-CT---ND  127 (261)
Q Consensus        53 iifD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~  127 (261)
                      |+||+||||+|+...+..++..+++++|.+ .+.+.....+    +...          ...+......... ..   ..
T Consensus         1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~----------~~~~~~~~~~~~~~~~~~~~~   66 (213)
T TIGR01449         1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFI----GNGV----------PVLMERVLAWAGQEPDAQRVA   66 (213)
T ss_pred             CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHh----cccH----------HHHHHHHhhccccccChHHHH
Confidence            689999999999888889999999999986 4444333211    1110          1111222111111 11   12


Q ss_pred             HHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHH
Q 024886          128 DYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRI  204 (261)
Q Consensus       128 ~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~  204 (261)
                      ++.....+.|...  ....++||+.++|+.|+++|++++|+||+... +..+++.+|+..+|+.++++++.+..||+|+.
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~  146 (213)
T TIGR01449        67 ELRKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDP  146 (213)
T ss_pred             HHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHH
Confidence            2233333344332  12578999999999999999999999998876 79999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          205 FKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       205 ~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      |..+++++|++|+++++|||+ .+|+++|+++|+.++++..+..
T Consensus       147 ~~~~~~~~~~~~~~~~~igDs-~~d~~aa~~aG~~~i~v~~g~~  189 (213)
T TIGR01449       147 LLLAAERLGVAPQQMVYVGDS-RVDIQAARAAGCPSVLLTYGYR  189 (213)
T ss_pred             HHHHHHHcCCChhHeEEeCCC-HHHHHHHHHCCCeEEEEccCCC
Confidence            999999999999999999999 8999999999999999976644

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK11587 putative phosphatase; Provisional

Probab=99.96  E-value=7.6e-28  Score=190.48  Aligned_cols=180  Identities=16%  Similarity=0.169  Sum_probs=133.8

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      |++++|+||+||||+|+...+..+|.++++++|.+.  .+....   ..+...          ...++.+..   +....
T Consensus         1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~--~~~~~~---~~g~~~----------~~~~~~~~~---~~~~~   62 (218)
T PRK11587          1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP--DEVLNF---IHGKQA----------ITSLRHFMA---GASEA   62 (218)
T ss_pred             CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH--HHHHHH---HcCCCH----------HHHHHHHhc---cCCcH
Confidence            468999999999999999999999999999999753  222211   111111          111111110   11111


Q ss_pred             HHHHHHHH--HHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCH
Q 024886          128 DYFEEVYE--YYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       128 ~~~~~~~~--~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~  202 (261)
                      .+.+.+..  .+..  .....++||+.++|+.|+++|++++|+||+... ....++..++ .+|+.++++++.+..||+|
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p  141 (218)
T PRK11587         63 EIQAEFTRLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEP  141 (218)
T ss_pred             HHHHHHHHHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCc
Confidence            22222211  1111  223589999999999999999999999998866 5777888888 4678888888888899999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +.|..+++.+|++|++|++|||+ ..|+++|+++|+.++++.++.
T Consensus       142 ~~~~~~~~~~g~~p~~~l~igDs-~~di~aA~~aG~~~i~v~~~~  185 (218)
T PRK11587        142 DAYLLGAQLLGLAPQECVVVEDA-PAGVLSGLAAGCHVIAVNAPA  185 (218)
T ss_pred             HHHHHHHHHcCCCcccEEEEecc-hhhhHHHHHCCCEEEEECCCC
Confidence            99999999999999999999999 899999999999999997653

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.96  E-value=5.3e-28  Score=187.24  Aligned_cols=181  Identities=19%  Similarity=0.246  Sum_probs=136.8

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc-CCC
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT-GCT  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  125 (261)
                      |.++++|+||+||||+|+...+..++.++++++|.+.+.+....    ..+..          ....+..+..... ...
T Consensus         2 ~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~----~~g~~----------~~~~~~~~~~~~~~~~~   67 (188)
T PRK10725          2 YDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVA----LNGSP----------TWRIAQAIIELNQADLD   67 (188)
T ss_pred             CCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHH----hcCCC----------HHHHHHHHHHHhCCCCC
Confidence            44679999999999999999999999999999998765443222    11110          1122233322221 112


Q ss_pred             chHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCH
Q 024886          126 NDDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       126 ~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~  202 (261)
                      .+.+.......+..  .....++|+ .++|+.|++. ++++|+||+... ++.+++.+|+..+|+.++++++.+..||+|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p  145 (188)
T PRK10725         68 PHALAREKTEAVKSMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAP  145 (188)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCCh
Confidence            22332322222221  122467786 5899999876 899999998877 799999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      ++|..+++++|++|++|++|||+ ..|+++|+++|+.+|++.
T Consensus       146 ~~~~~~~~~~~~~~~~~l~igDs-~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        146 DTFLRCAQLMGVQPTQCVVFEDA-DFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             HHHHHHHHHcCCCHHHeEEEecc-HhhHHHHHHCCCEEEeec
Confidence            99999999999999999999998 899999999999999874

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.96  E-value=1e-27  Score=190.33  Aligned_cols=181  Identities=18%  Similarity=0.268  Sum_probs=137.9

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcC-CCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG-CTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  126 (261)
                      +++++|+||+||||+|+...+..+|.+++.++|.+++.++....+.   +          ......+..+...... ...
T Consensus         2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~---g----------~~~~~~~~~~~~~~~~~~~~   68 (221)
T PRK10563          2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFK---G----------VKLYEIIDIISKEHGVTLAK   68 (221)
T ss_pred             CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhc---C----------CCHHHHHHHHHHHhCCCCCH
Confidence            4689999999999999988888999999999998876654433221   1          1112333444333221 122


Q ss_pred             hHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccc-eEEecCCCCCCCCCH
Q 024886          127 DDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFD-AVVISSEVGCEKPDP  202 (261)
Q Consensus       127 ~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~-~i~~~~~~~~~Kp~~  202 (261)
                      +++...+.+.+..  .....++||+.++|+.|+   ++++|+||++.. +...++.+|+.++|+ .++++++.+..||+|
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p  145 (221)
T PRK10563         69 AELEPVYRAEVARLFDSELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDP  145 (221)
T ss_pred             HHHHHHHHHHHHHHHHccCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCCh
Confidence            3333333222211  123588999999999983   899999999877 788999999999996 677877888999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGI  245 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~  245 (261)
                      +.|..+++++|++|++|++|||+ ..|+++|+++|+.++++..
T Consensus       146 ~~~~~a~~~~~~~p~~~l~igDs-~~di~aA~~aG~~~i~~~~  187 (221)
T PRK10563        146 ALMFHAAEAMNVNVENCILVDDS-SAGAQSGIAAGMEVFYFCA  187 (221)
T ss_pred             HHHHHHHHHcCCCHHHeEEEeCc-HhhHHHHHHCCCEEEEECC
Confidence            99999999999999999999999 7999999999999998853

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.96  E-value=2.3e-27  Score=186.11  Aligned_cols=180  Identities=24%  Similarity=0.310  Sum_probs=136.2

Q ss_pred             EEEccCCccccccccHHHHHHHHHHHh-CCC-CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchHHH
Q 024886           53 VLLDAGGTLLQLAEPVEETYASIARKY-GLN-VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYF  130 (261)
Q Consensus        53 iifD~DGTL~d~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (261)
                      |+||+||||+|+...+.+++.++++++ |.+ .+.+....    ..+......+.              . .+.... ..
T Consensus         1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~--------------~-~~~~~~-~~   60 (205)
T TIGR01454         1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRR----HLGRYFPDIMR--------------I-MGLPLE-ME   60 (205)
T ss_pred             CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHH----HhCccHHHHHH--------------H-cCCCHH-HH
Confidence            689999999999999999999999884 764 34433222    22222111111              1 111100 11


Q ss_pred             HHH-HHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHH
Q 024886          131 EEV-YEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAA  208 (261)
Q Consensus       131 ~~~-~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~  208 (261)
                      +.. ...+.......++||+.++|+.|+++|++++|+||+... +...++.+|+..+|+.++++++.+.+||+++.|..+
T Consensus        61 ~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~  140 (205)
T TIGR01454        61 EPFVRESYRLAGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREA  140 (205)
T ss_pred             HHHHHHHHHhhcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHH
Confidence            111 112221234689999999999999999999999998877 788999999999999999999988999999999999


Q ss_pred             HHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          209 LDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       209 ~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      ++++|++|+++++|||+ .+|+++|+++|+.++++..+..+..++
T Consensus       141 ~~~~~~~~~~~l~igD~-~~Di~aA~~~Gi~~i~~~~g~~~~~~l  184 (205)
T TIGR01454       141 LRLLDVPPEDAVMVGDA-VTDLASARAAGTATVAALWGEGDAGEL  184 (205)
T ss_pred             HHHcCCChhheEEEcCC-HHHHHHHHHcCCeEEEEEecCCChhhh
Confidence            99999999999999999 799999999999999887665554444

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.96  E-value=2e-27  Score=183.48  Aligned_cols=177  Identities=24%  Similarity=0.313  Sum_probs=133.2

Q ss_pred             EEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcC-CC---ch
Q 024886           52 AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG-CT---ND  127 (261)
Q Consensus        52 ~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~  127 (261)
                      +|+||+||||+|+...+..++.+++.++|.+.+.+....    ..+.          .....+..+...... ..   ..
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~----~~g~----------~~~~~~~~~~~~~~~~~~~~~~~   66 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNES----LKGV----------SREDSLERILDLGGKKYSEEEKE   66 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHH----hcCC----------ChHHHHHHHHHhcCCCCCHHHHH
Confidence            489999999999999999999999999998865543221    1111          112222222222111 11   11


Q ss_pred             HHHHHHHHHHh----hCCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          128 DYFEEVYEYYA----KGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       128 ~~~~~~~~~~~----~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      ++.....+.|.    ......++||+.++|+.|+++|++++|+||+.. ....++.+|+..+|+.++++++.+..||+|+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~  145 (185)
T TIGR01990        67 ELAERKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN-APTVLEKLGLIDYFDAIVDPAEIKKGKPDPE  145 (185)
T ss_pred             HHHHHHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc-HHHHHHhcCcHhhCcEEEehhhcCCCCCChH
Confidence            12222222222    122247899999999999999999999998643 4668999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      .|..++++++++|+++++|||+ .+|+++|+++|+.+|+|+
T Consensus       146 ~~~~~~~~~~~~~~~~v~vgD~-~~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       146 IFLAAAEGLGVSPSECIGIEDA-QAGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             HHHHHHHHcCCCHHHeEEEecC-HHHHHHHHHcCCEEEecC
Confidence            9999999999999999999999 899999999999999874

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.96  E-value=2.7e-27  Score=182.81  Aligned_cols=178  Identities=24%  Similarity=0.319  Sum_probs=135.1

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc-CCCch-
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT-GCTND-  127 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-  127 (261)
                      +++|+||+||||+|+...+..++.++++++|.+++.+. ..   ...+          ......+..+..... ..... 
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~-~~---~~~g----------~~~~~~~~~~~~~~~~~~~~~~   66 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQY-NT---SLGG----------LSREDILRAILKLRKPGLSLET   66 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHH-HH---HcCC----------CCHHHHHHHHHHhcCCCCCHHH
Confidence            47899999999999999888899999999998765321 11   1111          111222333332221 11111 


Q ss_pred             --HHHHHHHHHHhh---CCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCCCH
Q 024886          128 --DYFEEVYEYYAK---GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       128 --~~~~~~~~~~~~---~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~  202 (261)
                        .+.....+.+.+   .....++||+.++|+.|+++|++++++||+ ..++.+++.+|+..+|+.++++++.+..||+|
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~-~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~  145 (185)
T TIGR02009        67 IHQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS-KNADRILAKLGLTDYFDAIVDADEVKEGKPHP  145 (185)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc-hhHHHHHHHcChHHHCCEeeehhhCCCCCCCh
Confidence              122222222221   223589999999999999999999999998 55788999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEE
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLW  243 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v  243 (261)
                      ++|..+++++|++|+++++|||+ ..|+++|+++|+.+++|
T Consensus       146 ~~~~~~~~~~~~~~~~~v~IgD~-~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       146 ETFLLAAELLGVSPNECVVFEDA-LAGVQAARAAGMFAVAV  185 (185)
T ss_pred             HHHHHHHHHcCCCHHHeEEEeCc-HhhHHHHHHCCCeEeeC
Confidence            99999999999999999999999 89999999999999864

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.96  E-value=5.3e-27  Score=186.58  Aligned_cols=193  Identities=19%  Similarity=0.326  Sum_probs=139.1

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhH----HHHHHHHhcCCC
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPF----WRLVVSEATGCT  125 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  125 (261)
                      +|+|+||+||||+|+......++.++++++|...+...... +.......+..+.........+    +...........
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQ-YKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEA   79 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHH-HHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCC
Confidence            47899999999999999888899999999998765443221 1111111111111111111111    111222221111


Q ss_pred             c-hHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          126 N-DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       126 ~-~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      . +.+...+.+.+..  ...++||+.++|+.|+++ ++++|+||+... +...++.+|+..+|+.++++++.+..||+|+
T Consensus        80 ~~~~~~~~~~~~~~~--~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~  156 (224)
T TIGR02254        80 DEALLNQKYLRFLEE--GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKE  156 (224)
T ss_pred             cHHHHHHHHHHHHhc--cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHH
Confidence            1 1233333333322  247899999999999999 999999998877 6889999999999999999999999999999


Q ss_pred             HHHHHHHHc-CCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          204 IFKAALDQM-SVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       204 ~~~~~~~~l-~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +|..+++++ |++|+++++|||+..+|+++|+++|+.++++..+
T Consensus       157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~  200 (224)
T TIGR02254       157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPD  200 (224)
T ss_pred             HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCC
Confidence            999999999 9999999999999337999999999999998765

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.95  E-value=3.5e-27  Score=192.08  Aligned_cols=184  Identities=19%  Similarity=0.302  Sum_probs=139.7

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHH-HHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc---CC
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSA-DIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT---GC  124 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  124 (261)
                      .+|+|+||+||||+|+...+..++..+++++|.+.... .....    .+..          ....+...+....   +.
T Consensus        12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~----~g~~----------~~~~~~~~l~~~~~~~~~   77 (272)
T PRK13223         12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHW----VGNG----------APVLVRRALAGSIDHDGV   77 (272)
T ss_pred             cCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHH----hChh----------HHHHHHHHhcccccccCC
Confidence            57899999999999999999999999999999875432 22221    1110          0111111111000   01


Q ss_pred             C---chHHHHHHHHHHhhC-CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCC
Q 024886          125 T---NDDYFEEVYEYYAKG-EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEK  199 (261)
Q Consensus       125 ~---~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~K  199 (261)
                      .   .+++...+.+.|... ....++||+.++|+.|+++|++++|+||++.. +...++.+|+..+|+.++++++.+..|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~K  157 (272)
T PRK13223         78 DDELAEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKK  157 (272)
T ss_pred             CHHHHHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCC
Confidence            1   122223333333332 22478999999999999999999999998877 788999999999999999999888899


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      |+|++|+.+++++|++|+++++|||+ .+|+++|+++|+.++++.++.
T Consensus       158 p~p~~~~~~~~~~g~~~~~~l~IGD~-~~Di~aA~~aGi~~i~v~~G~  204 (272)
T PRK13223        158 PDPAALLFVMKMAGVPPSQSLFVGDS-RSDVLAAKAAGVQCVALSYGY  204 (272)
T ss_pred             CCcHHHHHHHHHhCCChhHEEEECCC-HHHHHHHHHCCCeEEEEecCC
Confidence            99999999999999999999999999 899999999999999887763

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.95  E-value=6.2e-27  Score=186.47  Aligned_cols=186  Identities=22%  Similarity=0.246  Sum_probs=141.2

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCC-CHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc-CC
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNV-DSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT-GC  124 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  124 (261)
                      .+++++|+||+||||+|+...+..++..+++++|.+. +......    ..+...          ...+........ ..
T Consensus         3 ~~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~----------~~~~~~~~~~~~~~~   68 (226)
T PRK13222          3 FMDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRT----WVGNGA----------DVLVERALTWAGREP   68 (226)
T ss_pred             CCcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHH----HhCccH----------HHHHHHHHhhccCCc
Confidence            3568999999999999998888889999999998864 3333222    111110          111222111100 11


Q ss_pred             C---chHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCC
Q 024886          125 T---NDDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCE  198 (261)
Q Consensus       125 ~---~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~  198 (261)
                      .   .+.....+.+.|...  ....++||+.++++.|+++|++++++||+... +..+++.+|+..+|+.+++++..+..
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~  148 (226)
T PRK13222         69 DEELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNK  148 (226)
T ss_pred             cHHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCC
Confidence            1   122333344444332  12578999999999999999999999998877 68999999999999999999998899


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       199 Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      ||+|++|..++++++++++++++|||+ .+|+++|+++|+.++++..+.
T Consensus       149 kp~~~~~~~~~~~~~~~~~~~i~igD~-~~Di~~a~~~g~~~i~v~~g~  196 (226)
T PRK13222        149 KPDPAPLLLACEKLGLDPEEMLFVGDS-RNDIQAARAAGCPSVGVTYGY  196 (226)
T ss_pred             CcChHHHHHHHHHcCCChhheEEECCC-HHHHHHHHHCCCcEEEECcCC
Confidence            999999999999999999999999999 799999999999999987653

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.95  E-value=1.6e-26  Score=183.25  Aligned_cols=103  Identities=20%  Similarity=0.246  Sum_probs=95.8

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      ..++||+.++|+.|+++|++++|+||+... +...++.+|+..+|+.++++++.+..||+|+.|..+++++|++|++|++
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~  171 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLF  171 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence            588999999999999999999999998876 6888999999999999999999999999999999999999999999999


Q ss_pred             EcCCchhhhHHHHhCCCeE-EEECCC
Q 024886          222 IGDDEKADKQGANSLGIDC-WLWGID  246 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~-i~v~~~  246 (261)
                      |||+ ..|+++|+++|+.+ +.|.++
T Consensus       172 igDs-~~di~aA~~aG~~~~~~v~~~  196 (224)
T PRK14988        172 IDDS-EPILDAAAQFGIRYCLGVTNP  196 (224)
T ss_pred             EcCC-HHHHHHHHHcCCeEEEEEeCC
Confidence            9999 79999999999984 667655

>PLN02940 riboflavin kinase

Probab=99.95  E-value=1.2e-26  Score=196.85  Aligned_cols=185  Identities=24%  Similarity=0.273  Sum_probs=143.1

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc-CCCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT-GCTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  126 (261)
                      ..+++|+||+||||+|+...+..++.++++++|...+.++....    .+.          .....+..+..... ....
T Consensus         9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~----~G~----------~~~~~~~~~~~~~~~~~~~   74 (382)
T PLN02940          9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKI----VGK----------TPLEAAATVVEDYGLPCST   74 (382)
T ss_pred             ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHh----cCC----------CHHHHHHHHHHHhCCCCCH
Confidence            35899999999999999999999999999999987765543321    111          11122222222211 1222


Q ss_pred             hHHHHHHHHHHhh-CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHH-hcCcccccceEEecCCCCCCCCCHH
Q 024886          127 DDYFEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLK-DLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       127 ~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~-~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      +++.....+.+.. .....++||+.++|+.|+++|++++|+||.... +...++ ..|+..+|+.++++++++..||+|+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~  154 (382)
T PLN02940         75 DEFNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPD  154 (382)
T ss_pred             HHHHHHHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHH
Confidence            3333333333322 123578999999999999999999999998877 677776 7899999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +|..+++.+|++|++|++|||+ ..|+++|+++|+.++++.++.
T Consensus       155 ~~~~a~~~lgv~p~~~l~VGDs-~~Di~aA~~aGi~~I~v~~g~  197 (382)
T PLN02940        155 IFLEAAKRLNVEPSNCLVIEDS-LPGVMAGKAAGMEVIAVPSIP  197 (382)
T ss_pred             HHHHHHHHcCCChhHEEEEeCC-HHHHHHHHHcCCEEEEECCCC
Confidence            9999999999999999999999 799999999999999998763

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.95  E-value=1.8e-26  Score=184.82  Aligned_cols=192  Identities=17%  Similarity=0.201  Sum_probs=128.6

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCC------CCHHHHHHHHHHHhcCCCccccc-cCCCChhHHHHHHHH
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLN------VDSADIKKGFRKAFAAPWPEKLR-YEGDGRPFWRLVVSE  120 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  120 (261)
                      .++|+|+||+||||+|+...+..+++++++.++..      .+..... .+............. ............+. 
T Consensus         8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-   85 (238)
T PRK10748          8 GRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQ-RLRQALREAEPEIYHDVTRWRWRAIEQAML-   85 (238)
T ss_pred             CCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHH-HHHHHHHHhCchhhCcHHHHHHHHHHHHHH-
Confidence            35789999999999999888888888776554211      1112211 122211111111100 00000011111111 


Q ss_pred             hcCCCchH---HHHHHHHHHhhC-CceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCC
Q 024886          121 ATGCTNDD---YFEEVYEYYAKG-EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVG  196 (261)
Q Consensus       121 ~~~~~~~~---~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~  196 (261)
                      ..+.....   ..+.....+... ....++||+.++|+.|++. ++++++||++..    ++..|+..+|+.++++++.+
T Consensus        86 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~----~~~~gl~~~fd~i~~~~~~~  160 (238)
T PRK10748         86 DAGLSAEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ----PELFGLGDYFEFVLRAGPHG  160 (238)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch----HHHCCcHHhhceeEecccCC
Confidence            22222222   112222222211 2257899999999999876 999999998765    37789999999999999999


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ..||+|++|..+++++|++|++|++|||+...|+.+|+++|+.++++.++
T Consensus       161 ~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~  210 (238)
T PRK10748        161 RSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPE  210 (238)
T ss_pred             cCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence            99999999999999999999999999999559999999999999999764

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.95  E-value=4.6e-27  Score=179.55  Aligned_cols=174  Identities=21%  Similarity=0.404  Sum_probs=132.0

Q ss_pred             EEEccCCccccccccHHHHHHHH-HHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchHHHH
Q 024886           53 VLLDAGGTLLQLAEPVEETYASI-ARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFE  131 (261)
Q Consensus        53 iifD~DGTL~d~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (261)
                      |+||+||||+|+...+.+++... +++++...+.+.....    ..          ......+..+..... .......+
T Consensus         1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----------~~~~~~~~~~~~~~~-~~~~~~~~   65 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELREL----FG----------KSYEEALERLLERFG-IDPEEIQE   65 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHH----TT----------SHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHH----hC----------CCHHHHHHHhhhccc-hhHHHHHH
Confidence            79999999999988777788874 6667655322222221    11          011222333332221 11222223


Q ss_pred             HHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHH
Q 024886          132 EVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALD  210 (261)
Q Consensus       132 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  210 (261)
                      .+.+. ......+++||+.++|+.|+++|++++++||.+.. +...++.+|+..+|+.++++++.+..||++.+|..+++
T Consensus        66 ~~~~~-~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  144 (176)
T PF13419_consen   66 LFREY-NLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALE  144 (176)
T ss_dssp             HHHHH-HHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHH
T ss_pred             Hhhhh-hhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence            33332 22234799999999999999999999999999987 78999999999999999999999999999999999999


Q ss_pred             HcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEE
Q 024886          211 QMSVEASRTVHIGDDEKADKQGANSLGIDCWLW  243 (261)
Q Consensus       211 ~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v  243 (261)
                      ++|++|+++++|||+ ..|+++|+++|+.+|+|
T Consensus       145 ~~~~~p~~~~~vgD~-~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  145 KLGIPPEEILFVGDS-PSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             HHTSSGGGEEEEESS-HHHHHHHHHTTSEEEEE
T ss_pred             HcCCCcceEEEEeCC-HHHHHHHHHcCCeEEeC
Confidence            999999999999999 69999999999999876

...

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.95  E-value=4.8e-27  Score=185.12  Aligned_cols=203  Identities=25%  Similarity=0.287  Sum_probs=133.5

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCcc-ccccCCCChhHHHHHHHHhcC-CCch
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPE-KLRYEGDGRPFWRLVVSEATG-CTND  127 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~  127 (261)
                      +|+|+||+||||+|+.. ....|...+...|.+  .......+.......+.+ ..........++..+...... ....
T Consensus         2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~   78 (211)
T TIGR02247         2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPGLK--DFIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRLGHD   78 (211)
T ss_pred             ceEEEEecCCceecCHH-HHHHHHHHcCCCCCc--cHHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhccccCCC
Confidence            57899999999999865 555665554444443  222122111111111111 100111112222222221111 0111


Q ss_pred             HHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH---HHHHHHhcCcccccceEEecCCCCCCCCCHHH
Q 024886          128 DYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR---LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRI  204 (261)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~  204 (261)
                      .........+... ...++||+.++|+.|+++|++++|+||+...   ....+...++..+|+.++++++.+..||+|.+
T Consensus        79 ~~~~~~~~~~~~~-~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~  157 (211)
T TIGR02247        79 VRIAPVFPLLYGE-NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRI  157 (211)
T ss_pred             cCchhhHHHHhcc-ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHH
Confidence            1112222222221 3578999999999999999999999997643   23334456788999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          205 FKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       205 ~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      |..+++++|++|++|++|||+ ..|+++|+++|+.++++.++.....+|.+++
T Consensus       158 ~~~~~~~~g~~~~~~l~i~D~-~~di~aA~~aG~~~i~v~~~~~~~~~l~~~~  209 (211)
T TIGR02247       158 YQLMLERLGVAPEECVFLDDL-GSNLKPAAALGITTIKVSDEEQAIHDLEKAT  209 (211)
T ss_pred             HHHHHHHcCCCHHHeEEEcCC-HHHHHHHHHcCCEEEEECCHHHHHHHHHHHh
Confidence            999999999999999999998 8999999999999999988777777777664

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.95  E-value=4.3e-26  Score=185.06  Aligned_cols=184  Identities=16%  Similarity=0.240  Sum_probs=136.9

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCC-CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCC--
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLN-VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGC--  124 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  124 (261)
                      +.+++|+||+||||+|+...+..++.++++++|.. .+.+.....    .+...          .    ...... +.  
T Consensus        60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~----~g~~~----------~----~i~~~~-~~~~  120 (273)
T PRK13225         60 QTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQL----RQWSS----------R----TIVRRA-GLSP  120 (273)
T ss_pred             hhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHH----hCccH----------H----HHHHHc-CCCH
Confidence            36899999999999999999999999999999986 344332221    11110          0    111111 11  


Q ss_pred             -CchHHHHHHHHHHhhC-CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCC
Q 024886          125 -TNDDYFEEVYEYYAKG-EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPD  201 (261)
Q Consensus       125 -~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~  201 (261)
                       ...++.....+.+... ....++||+.++|+.|+++|++++|+||+... +...++.+|+.++|+.+++.+..   +++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~---~~k  197 (273)
T PRK13225        121 WQQARLLQRVQRQLGDCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI---LSK  197 (273)
T ss_pred             HHHHHHHHHHHHHHHhhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---CCC
Confidence             1122223333333221 23578999999999999999999999998877 79999999999999988877654   345


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                      +..|..++++++++|++|++|||+ ..|+++|+++|+.++++..+.....++.
T Consensus       198 ~~~~~~~l~~~~~~p~~~l~IGDs-~~Di~aA~~AG~~~I~v~~g~~~~~~l~  249 (273)
T PRK13225        198 RRALSQLVAREGWQPAAVMYVGDE-TRDVEAARQVGLIAVAVTWGFNDRQSLV  249 (273)
T ss_pred             HHHHHHHHHHhCcChhHEEEECCC-HHHHHHHHHCCCeEEEEecCCCCHHHHH
Confidence            679999999999999999999999 8999999999999999988755544443

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.95  E-value=4.4e-26  Score=181.88  Aligned_cols=195  Identities=23%  Similarity=0.292  Sum_probs=132.7

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHH------HHHHHhcCCCccccccCCCChhHHHHHHHH
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKK------GFRKAFAAPWPEKLRYEGDGRPFWRLVVSE  120 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (261)
                      ++++++|+||+||||+|.......+....+.+.+..........      .+..........   ...............
T Consensus         1 ~~~~k~i~FD~d~TL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   77 (229)
T COG1011           1 MMMIKAILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTG---EYGLTLERLLELLER   77 (229)
T ss_pred             CCceeEEEEecCCcccccchHHhHHHHHHHHHhchHHHhhhhHHHHHHHHHHHHHHcccchH---HHhhhHHHHHHHHHh
Confidence            35789999999999999876554433333333332211111000      011111100000   000000011111112


Q ss_pred             hcCCCchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCC
Q 024886          121 ATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEK  199 (261)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~K  199 (261)
                      ................+..  ..+++|++.+.|+.++.. ++++++||+... ....++.+|+.++||.++.+++.+..|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~K  154 (229)
T COG1011          78 LLGDEDAELVEELLAALAK--LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAK  154 (229)
T ss_pred             hcccccHHHHHHHHHHHHh--hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCC
Confidence            2222233344444433332  358899999999999998 999999997765 799999999999999999999999999


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      |++.+|+.+++.+|++|++++||||+..+|+.+|+++||.++++.++.
T Consensus       155 P~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~  202 (229)
T COG1011         155 PDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGG  202 (229)
T ss_pred             CCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence            999999999999999999999999999999999999999999887653

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.94  E-value=1.8e-25  Score=183.14  Aligned_cols=191  Identities=20%  Similarity=0.288  Sum_probs=129.7

Q ss_pred             ccccEEEEccCCcccccc-ccHHHHHHHHHHHhCC-CC--CHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHh--
Q 024886           48 KAYDAVLLDAGGTLLQLA-EPVEETYASIARKYGL-NV--DSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEA--  121 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~-~~~~~~~~~~~~~~g~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  121 (261)
                      ..+++||||+||||+|+. ..+..+|.++++++|+ ..  +.+.... +.. .+.....          +...+....  
T Consensus        38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~-~~~-~g~~~~~----------~~~~~~~~~~~  105 (286)
T PLN02779         38 ALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDE-LLN-IGGGKER----------MTWYFNENGWP  105 (286)
T ss_pred             cCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHH-HHc-cCCChHH----------HHHHHHHcCCC
Confidence            357999999999999999 8888999999999998 32  2222111 111 1110000          000000000  


Q ss_pred             ------c---CCCchH----HHHHHHHHHhh---CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc
Q 024886          122 ------T---GCTNDD----YFEEVYEYYAK---GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID  184 (261)
Q Consensus       122 ------~---~~~~~~----~~~~~~~~~~~---~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~  184 (261)
                            .   +...+.    +.....+.|..   ...+.++||+.++|+.|+++|++++|+||+... +..+++.++...
T Consensus       106 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~  185 (286)
T PLN02779        106 TSTIEKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE  185 (286)
T ss_pred             ccccccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc
Confidence                  0   000011    11111122221   122478999999999999999999999998877 677777664333


Q ss_pred             ccc--eEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChH
Q 024886          185 LFD--AVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFS  251 (261)
Q Consensus       185 ~f~--~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~  251 (261)
                      +++  .++++++++..||+|++|..+++++|++|+++++|||+ .+|+++|+++|+.+|++.++..+.+
T Consensus       186 ~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs-~~Di~aA~~aG~~~i~v~~g~~~~~  253 (286)
T PLN02779        186 RAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDS-VIGLQAAKAAGMRCIVTKSSYTADE  253 (286)
T ss_pred             ccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCC-HHhHHHHHHcCCEEEEEccCCcccc
Confidence            333  23377778889999999999999999999999999999 7999999999999999977754433

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.94  E-value=4.4e-25  Score=172.27  Aligned_cols=193  Identities=18%  Similarity=0.223  Sum_probs=129.6

Q ss_pred             EEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCC-CchHHH
Q 024886           52 AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGC-TNDDYF  130 (261)
Q Consensus        52 ~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  130 (261)
                      +|+||+||||++.+...  .+.......+.  +.......+..  ...+.+...+.....+++..+....... ..+.+.
T Consensus         2 ~viFDldgvL~d~~~~~--~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~   75 (199)
T PRK09456          2 LYIFDLGNVIVDIDFNR--VLGVWSDLSRV--PLATLKKRFTM--GEAFHQHERGEISDEAFAEALCHEMALSLSYEQFA   75 (199)
T ss_pred             EEEEeCCCccccCcHHH--HHHHHHHhcCC--CHHHHHHHHhc--CcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence            69999999999975321  11111111222  23333222211  1112222222223344444443332221 123333


Q ss_pred             HHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh-cCcccccceEEecCCCCCCCCCHHHHHHH
Q 024886          131 EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKD-LNVIDLFDAVVISSEVGCEKPDPRIFKAA  208 (261)
Q Consensus       131 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~  208 (261)
                      ..+.+.+     ..++||+.++|+.|+++|++++|+||++.. ....+.. .++..+|+.++++++.+..||+|++|+.+
T Consensus        76 ~~~~~~~-----~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~  150 (199)
T PRK09456         76 HGWQAVF-----VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHV  150 (199)
T ss_pred             HHHHHHH-----hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHH
Confidence            3333322     268999999999999999999999998876 4544444 47888999999999999999999999999


Q ss_pred             HHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          209 LDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       209 ~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      ++++|++|+++++|||+ ..|+++|+++|+.++++.++....+.|...
T Consensus       151 ~~~~~~~p~~~l~vgD~-~~di~aA~~aG~~~i~~~~~~~~~~~l~~~  197 (199)
T PRK09456        151 LQAEGFSAADAVFFDDN-ADNIEAANALGITSILVTDKQTIPDYFAKV  197 (199)
T ss_pred             HHHcCCChhHeEEeCCC-HHHHHHHHHcCCEEEEecCCccHHHHHHhc
Confidence            99999999999999998 799999999999999998866655555443

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.94  E-value=4.7e-25  Score=192.38  Aligned_cols=185  Identities=14%  Similarity=0.181  Sum_probs=133.6

Q ss_pred             ccccccccEEEEccCCccccccccHHHHHHHHHHHhCC-----C-CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHH
Q 024886           44 KSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGL-----N-VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLV  117 (261)
Q Consensus        44 ~~~~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (261)
                      ..-.+|+++|+||+||||+|+...+..+|.+++++++.     . .+.+.+.    ...+...          ...+..+
T Consensus       235 ~~~~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~----------~~~~~~l  300 (459)
T PRK06698        235 KGENEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYR----EIMGVPL----------PKVWEAL  300 (459)
T ss_pred             cchHHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHH----HHcCCCh----------HHHHHHH
Confidence            33345679999999999999999999999999988741     1 1222222    2222211          1222222


Q ss_pred             HHHhcCCCchHHHHHHHHHHhh---CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecC
Q 024886          118 VSEATGCTNDDYFEEVYEYYAK---GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISS  193 (261)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~  193 (261)
                      .........++....+.+.+..   ....+++||+.++|+.|+++|++++|+||+... +..+++.+|+..+|+.+++++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d  380 (459)
T PRK06698        301 LPDHSLEIREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIE  380 (459)
T ss_pred             hhhcchhHHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecC
Confidence            2111100112222222222221   123588999999999999999999999999987 799999999999999999998


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          194 EVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       194 ~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++. .||+|+.|..++++++  |++|++|||+ .+|+++|+++|+.++++.++
T Consensus       381 ~v~-~~~kP~~~~~al~~l~--~~~~v~VGDs-~~Di~aAk~AG~~~I~v~~~  429 (459)
T PRK06698        381 QIN-SLNKSDLVKSILNKYD--IKEAAVVGDR-LSDINAAKDNGLIAIGCNFD  429 (459)
T ss_pred             CCC-CCCCcHHHHHHHHhcC--cceEEEEeCC-HHHHHHHHHCCCeEEEEeCC
Confidence            874 4677889999999875  6899999999 79999999999999998665

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.93  E-value=1.6e-24  Score=203.72  Aligned_cols=190  Identities=28%  Similarity=0.308  Sum_probs=145.2

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc--CCCc
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT--GCTN  126 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  126 (261)
                      ++++|+|||||||+|+...+..+|.++++++|.+++.+.....    .+..          ...++........  +...
T Consensus        74 ~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~----~G~~----------~~~~~~~~~~~~~l~~~~~  139 (1057)
T PLN02919         74 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPF----MGTG----------EANFLGGVASVKGVKGFDP  139 (1057)
T ss_pred             CCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHH----hCCC----------HHHHHHHHHHhcCCCCCCH
Confidence            6899999999999999999999999999999988766554332    1111          1122222211111  1122


Q ss_pred             hHHHHHHHH----HHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc-cccceEEecCCCCCCCC
Q 024886          127 DDYFEEVYE----YYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI-DLFDAVVISSEVGCEKP  200 (261)
Q Consensus       127 ~~~~~~~~~----~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp  200 (261)
                      .+..+++.+    .|.......++||+.++|+.|+++|++++|+||.... +...++.+|+. .+|+.++++++.+..||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP  219 (1057)
T PLN02919        140 DAAKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKP  219 (1057)
T ss_pred             HHHHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCC
Confidence            222233332    2222222357999999999999999999999998877 78899999996 78999999999999999


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                      +|++|..+++++|++|++|++|||+ ..|+++|+++||.+|++..+. ..++|.
T Consensus       220 ~Pe~~~~a~~~lgv~p~e~v~IgDs-~~Di~AA~~aGm~~I~v~~~~-~~~~L~  271 (1057)
T PLN02919        220 APDIFLAAAKILGVPTSECVVIEDA-LAGVQAARAAGMRCIAVTTTL-SEEILK  271 (1057)
T ss_pred             CHHHHHHHHHHcCcCcccEEEEcCC-HHHHHHHHHcCCEEEEECCCC-CHHHHh
Confidence            9999999999999999999999999 799999999999999998764 345543

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.93  E-value=6.4e-25  Score=169.34  Aligned_cols=173  Identities=19%  Similarity=0.269  Sum_probs=122.8

Q ss_pred             cEEEEccCCccccccccHHHHHHHHHH-----HhCCCCCHH-HHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCC
Q 024886           51 DAVLLDAGGTLLQLAEPVEETYASIAR-----KYGLNVDSA-DIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGC  124 (261)
Q Consensus        51 k~iifD~DGTL~d~~~~~~~~~~~~~~-----~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (261)
                      ++|+||+||||+|+...+..++.+.+.     ++|++.... .....+....+.             .+ ...... ...
T Consensus         1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~-------------~~-~~~~~~-~~~   65 (184)
T TIGR01993         1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGT-------------TL-AGLMIL-HEI   65 (184)
T ss_pred             CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHch-------------HH-HHHHHh-hCC
Confidence            479999999999998888888877654     446542211 111111111111             00 011111 112


Q ss_pred             CchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCC----CC
Q 024886          125 TNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGC----EK  199 (261)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~----~K  199 (261)
                      ....+...+.+.+. .....++||+.++|+.|+   ++++|+||++.. +...++.+|+..+|+.++++++.+.    .|
T Consensus        66 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~K  141 (184)
T TIGR01993        66 DADEYLRYVHGRLP-YEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPK  141 (184)
T ss_pred             CHHHHHHHHhccCC-HHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCC
Confidence            22222222222110 112468999999999997   579999999877 7999999999999999999998876    59


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEE
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLW  243 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v  243 (261)
                      |+|++|..+++++|++|+++++|||+ ..|+++|+++|+.+++|
T Consensus       142 P~p~~~~~~~~~~~~~~~~~l~vgD~-~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       142 PSPQAYEKALREAGVDPERAIFFDDS-ARNIAAAKALGMKTVLV  184 (184)
T ss_pred             CCHHHHHHHHHHhCCCccceEEEeCC-HHHHHHHHHcCCEEeeC
Confidence            99999999999999999999999999 79999999999999864

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.93  E-value=5e-24  Score=166.07  Aligned_cols=176  Identities=19%  Similarity=0.188  Sum_probs=125.5

Q ss_pred             EEEEccCCccccccccHHHHHHHHHHHhC-CCCCHHHHHHHHHHHhc-CCCccccccCCCChhHHHHHHHHh------cC
Q 024886           52 AVLLDAGGTLLQLAEPVEETYASIARKYG-LNVDSADIKKGFRKAFA-APWPEKLRYEGDGRPFWRLVVSEA------TG  123 (261)
Q Consensus        52 ~iifD~DGTL~d~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~  123 (261)
                      +|+||+||||+|+...+..++.++++++| ..++.+.....+..... ..+.       .....+...+...      ..
T Consensus         2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~   74 (197)
T TIGR01548         2 ALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQ-------LTHRLVVDGLNSASSERVRDA   74 (197)
T ss_pred             ceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchH-------HHHHHHHHhhhcccchhccCC
Confidence            68999999999999999999999999997 45555544332211000 0000       0000001111100      01


Q ss_pred             CCchHHHHHHHHHHhhCC-----------ceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEe
Q 024886          124 CTNDDYFEEVYEYYAKGE-----------AWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVI  191 (261)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~-----------~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~  191 (261)
                      ...+.+...+.+.|....           ...+.+++.++|+.|++.|++++|+||++.. +..+++.+|+..+|+.+++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~  154 (197)
T TIGR01548        75 PTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIW  154 (197)
T ss_pred             ccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEe
Confidence            123334444444443210           1234556699999999999999999999877 7999999999999999999


Q ss_pred             cCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhC
Q 024886          192 SSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSL  236 (261)
Q Consensus       192 ~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~  236 (261)
                      +++... ||+|+.|..+++++|+++++|++|||+ .+|+++|+++
T Consensus       155 ~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD~-~~Di~aA~~a  197 (197)
T TIGR01548       155 MEDCPP-KPNPEPLILAAKALGVEACHAAMVGDT-VDDIITGRKA  197 (197)
T ss_pred             ecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeCC-HHHHHHHHhC
Confidence            998877 999999999999999999999999999 7999999874

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.92  E-value=6.9e-24  Score=163.38  Aligned_cols=100  Identities=28%  Similarity=0.448  Sum_probs=91.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      .+++||+.++|+.|++.|++++|+||+.......+.++|+..+|+.++++++.+.+||+|..|..+++++|++|+++++|
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~v  163 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDHAVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFV  163 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence            47899999999999999999999999887664444459999999999999999999999999999999999999999999


Q ss_pred             cCCchhhhHHHHhCCCeEEEE
Q 024886          223 GDDEKADKQGANSLGIDCWLW  243 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v  243 (261)
                      ||+ ..|+++|+++|+.+|++
T Consensus       164 gD~-~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       164 DDS-PAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             cCC-HHHHHHHHHcCCEEEeC
Confidence            999 79999999999999864

HAD subfamilies caused by an overly broad single model.

>PLN02811 hydrolase

Probab=99.91  E-value=4e-23  Score=163.70  Aligned_cols=178  Identities=21%  Similarity=0.258  Sum_probs=129.3

Q ss_pred             cCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc-C--CCchHHHHHH
Q 024886           57 AGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT-G--CTNDDYFEEV  133 (261)
Q Consensus        57 ~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~  133 (261)
                      +||||+|+...+..+|.++++++|+.++.+...    ...+..          ....+..+..... .  .....+....
T Consensus         1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~----~~~G~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (220)
T PLN02811          1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKA----KMMGKK----------AIEAARIFVEESGLSDSLSPEDFLVER   66 (220)
T ss_pred             CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHH----HccCCC----------HHHHHHHHHHHhCCCCCCCHHHHHHHH
Confidence            699999999999999999999999876544221    122211          1122222222211 1  1112222222


Q ss_pred             HHHHhh-CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HH-HHHHhcCcccccceEEecC--CCCCCCCCHHHHHHH
Q 024886          134 YEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LR-KLLKDLNVIDLFDAVVISS--EVGCEKPDPRIFKAA  208 (261)
Q Consensus       134 ~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~-~~l~~~gl~~~f~~i~~~~--~~~~~Kp~~~~~~~~  208 (261)
                      ...+.. .....++||+.++|+.|+++|++++|+||.... .. ..++..++..+|+.+++++  +++.+||+|++|..+
T Consensus        67 ~~~~~~~~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a  146 (220)
T PLN02811         67 EAMLQDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAA  146 (220)
T ss_pred             HHHHHHHHhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHH
Confidence            222221 112578999999999999999999999998765 43 3444457888999999999  888899999999999


Q ss_pred             HHHcC---CCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCC
Q 024886          209 LDQMS---VEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKT  249 (261)
Q Consensus       209 ~~~l~---~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~  249 (261)
                      +++++   ++|++|++|||+ ..|+++|+++|+.+|++.++..+
T Consensus       147 ~~~~~~~~~~~~~~v~IgDs-~~di~aA~~aG~~~i~v~~~~~~  189 (220)
T PLN02811        147 ARRFEDGPVDPGKVLVFEDA-PSGVEAAKNAGMSVVMVPDPRLD  189 (220)
T ss_pred             HHHhCCCCCCccceEEEecc-HhhHHHHHHCCCeEEEEeCCCCc
Confidence            99997   999999999999 79999999999999999876544

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.91  E-value=2.3e-23  Score=156.10  Aligned_cols=153  Identities=29%  Similarity=0.480  Sum_probs=116.4

Q ss_pred             EEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchHHHH
Q 024886           52 AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFE  131 (261)
Q Consensus        52 ~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (261)
                      +|+||+||||+|+...+..+|.+.++++|..  .+.+    ....+...          ..+ .....         ..+
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~--~~~~----~~~~g~~~----------~~~-~~~~~---------~~~   54 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEETLEEFGED--FQAL----KALRGLAE----------ELL-YRIAT---------SFE   54 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHHHHHhccc--HHHH----HHHHccCh----------HHH-HHHHH---------HHH
Confidence            4899999999999888889999999998852  2222    11121100          011 11100         011


Q ss_pred             HHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHH
Q 024886          132 EVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALD  210 (261)
Q Consensus       132 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  210 (261)
                      ++.. +..  ....+||+.++|+.|+++|++++|+||+... +...++.+ +..+|+.++++++.+ .||+|+.|..+++
T Consensus        55 ~~~~-~~~--~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~  129 (154)
T TIGR01549        55 ELLG-YDA--EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALE  129 (154)
T ss_pred             HHhC-cch--hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHH
Confidence            1111 211  2467899999999999999999999999877 67777877 788999999999888 9999999999999


Q ss_pred             HcCCCCCcEEEEcCCchhhhHHHHhCC
Q 024886          211 QMSVEASRTVHIGDDEKADKQGANSLG  237 (261)
Q Consensus       211 ~l~~~~~~~l~iGD~~~~Di~~a~~~G  237 (261)
                      ++|+++ +|++|||+ ..|+++|+++|
T Consensus       130 ~~~~~~-~~l~iGDs-~~Di~aa~~aG  154 (154)
T TIGR01549       130 SLGLPP-EVLHVGDN-LNDIEGARNAG  154 (154)
T ss_pred             HcCCCC-CEEEEeCC-HHHHHHHHHcc
Confidence            999999 99999999 89999999987

HAD subfamilies caused by an overly broad single model.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.90  E-value=4.9e-24  Score=163.10  Aligned_cols=170  Identities=19%  Similarity=0.272  Sum_probs=117.0

Q ss_pred             EEEEccCCccccccccHHHHHHHHHHHhCCC---CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC-ch
Q 024886           52 AVLLDAGGTLLQLAEPVEETYASIARKYGLN---VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT-ND  127 (261)
Q Consensus        52 ~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  127 (261)
                      +|+||+||||+|+...+..++..++.+.+..   .+.......+.......+..+..   ........+.... +.. ..
T Consensus         1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-g~~~~~   76 (175)
T TIGR01493         1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPE---DTVRALRYIADRL-GLDAEP   76 (175)
T ss_pred             CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHH---HHHHHHHHHHHHc-CCCCCH
Confidence            4899999999999988888888777664421   11111121111111100000000   0011222222222 222 22


Q ss_pred             HHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHH
Q 024886          128 DYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFK  206 (261)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~  206 (261)
                      +..+.+.+.+..   ..++||+.++|+       +++|+||++.. +...++.+|+..+|+.++++++++..||+|+.|.
T Consensus        77 ~~~~~~~~~~~~---~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~  146 (175)
T TIGR01493        77 KYGERLRDAYKN---LPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYE  146 (175)
T ss_pred             HHHHHHHHHHhc---CCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHH
Confidence            334444444433   478999999998       38999999887 7889999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCcEEEEcCCchhhhHHHHhC
Q 024886          207 AALDQMSVEASRTVHIGDDEKADKQGANSL  236 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~  236 (261)
                      .+++++|++|++|++|||+ ..|+.+|+++
T Consensus       147 ~~~~~~~~~p~~~l~vgD~-~~Di~~A~~~  175 (175)
T TIGR01493       147 LVFDTVGLPPDRVLMVAAH-QWDLIGARKF  175 (175)
T ss_pred             HHHHHHCCCHHHeEeEecC-hhhHHHHhcC
Confidence            9999999999999999999 7999999864

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PHA02597 30

Probab=99.89  E-value=4.2e-22  Score=155.27  Aligned_cols=166  Identities=16%  Similarity=0.205  Sum_probs=111.1

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchH
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDD  128 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (261)
                      |+|+|+||+||||+|..    .++.++++++|++.  ++....+........              ...    .+.. ..
T Consensus         1 m~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~--------------~~~----~~~~-~~   55 (197)
T PHA02597          1 MKPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT--DHILKMIQDERFRDP--------------GEL----FGCD-QE   55 (197)
T ss_pred             CCcEEEEecCCceEchh----hccHHHHHhcCCCH--HHHHHHHhHhhhcCH--------------HHH----hccc-HH
Confidence            37899999999999954    35667777888643  333332221111000              000    1111 11


Q ss_pred             HHHHHHHHHh-h--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCccc----ccceEEecCCCCCCCC
Q 024886          129 YFEEVYEYYA-K--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRL-RKLLKDLNVID----LFDAVVISSEVGCEKP  200 (261)
Q Consensus       129 ~~~~~~~~~~-~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~-~~~l~~~gl~~----~f~~i~~~~~~~~~Kp  200 (261)
                      ...++.+.|. .  .....++||+.++|+.|++. ++++++||..... ...++.+++..    +|+.+++++.   .||
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~---~~~  131 (197)
T PHA02597         56 LAKKLIEKYNNSDFIRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH---DES  131 (197)
T ss_pred             HHHHHhhhhhHHHHHHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc---Ccc
Confidence            1111111111 1  11247899999999999987 5788889876654 44566777654    4566777665   367


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhC--CCeEEEECCC
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSL--GIDCWLWGID  246 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~--G~~~i~v~~~  246 (261)
                      +|+.|..+++++|  |++++||||+ ..|+++|+++  |++++++..+
T Consensus       132 kp~~~~~a~~~~~--~~~~v~vgDs-~~di~aA~~a~~Gi~~i~~~~~  176 (197)
T PHA02597        132 KEKLFIKAKEKYG--DRVVCFVDDL-AHNLDAAHEALSQLPVIHMLRG  176 (197)
T ss_pred             cHHHHHHHHHHhC--CCcEEEeCCC-HHHHHHHHHHHcCCcEEEecch
Confidence            7899999999999  8889999999 8999999999  9999999776

2 hypothetical protein; Provisional

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.89  E-value=1.2e-21  Score=151.99  Aligned_cols=185  Identities=22%  Similarity=0.272  Sum_probs=145.5

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHh-cCCC
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEA-TGCT  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  125 (261)
                      ...+.+++||+||||+|++..+.++|++++.+||...+.+....    ..+.          ...+..+.++... ....
T Consensus         7 ~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~----~mG~----------~~~eaa~~~~~~~~dp~s   72 (222)
T KOG2914|consen    7 SLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVK----SMGK----------RTSEAARLFVKKLPDPVS   72 (222)
T ss_pred             ccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHH----HcCC----------CHHHHHHHHHhhcCCCCC
Confidence            34678999999999999999999999999999998665554332    2221          1233334443222 3345


Q ss_pred             chHHHHHHHHHHhh-CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcC-cccccceEEe--cCCCCCCCC
Q 024886          126 NDDYFEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLN-VIDLFDAVVI--SSEVGCEKP  200 (261)
Q Consensus       126 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~g-l~~~f~~i~~--~~~~~~~Kp  200 (261)
                      .+++..+..+.... .....+.||+.++++.|+.+|++++++|+.++. ....+.+++ +...|..++.  ..++..+||
T Consensus        73 ~ee~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP  152 (222)
T KOG2914|consen   73 REEFNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKP  152 (222)
T ss_pred             HHHHHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCC
Confidence            66666666555443 334688999999999999999999999998766 777777776 7777888887  567888999


Q ss_pred             CHHHHHHHHHHcCCCC-CcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          201 DPRIFKAALDQMSVEA-SRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~-~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +|++|..+++.+|.++ +.|++++|+ ...+++|.++||+++++.+.
T Consensus       153 ~Pdi~l~A~~~l~~~~~~k~lVfeds-~~Gv~aa~aagm~vi~v~~~  198 (222)
T KOG2914|consen  153 DPDIYLKAAKRLGVPPPSKCLVFEDS-PVGVQAAKAAGMQVVGVATP  198 (222)
T ss_pred             CchHHHHHHHhcCCCCccceEEECCC-HHHHHHHHhcCCeEEEecCC
Confidence            9999999999999999 999999999 89999999999999999873

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.89  E-value=1.4e-21  Score=154.80  Aligned_cols=184  Identities=20%  Similarity=0.202  Sum_probs=121.5

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      ++++++++||+||||+++.     .+.++++.+|.........   .....        .......+.........+.. 
T Consensus        11 ~~~~k~iiFD~DGTL~~~~-----~~~~l~~~~g~~~~~~~~~---~~~~~--------g~~~~~~~~~~~~~~~~~~~-   73 (219)
T TIGR00338        11 LRSKKLVVFDMDSTLINAE-----TIDEIAKIAGVEEEVSEIT---ERAMR--------GELDFKASLRERVALLKGLP-   73 (219)
T ss_pred             hccCCEEEEeCcccCCCch-----HHHHHHHHhCCHHHHHHHH---HHHHc--------CCCCHHHHHHHHHHHhCCCC-
Confidence            4578899999999999974     4667777777642222211   11111        01111222222222222221 


Q ss_pred             hHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEec-------C---CC
Q 024886          127 DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVIS-------S---EV  195 (261)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~-------~---~~  195 (261)
                      .+...   +.+..   .+++||+.++|+.|+++|++++|+||+... +..+++.+|+..+|+..+..       .   ..
T Consensus        74 ~~~~~---~~~~~---~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~  147 (219)
T TIGR00338        74 VELLK---EVREN---LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPI  147 (219)
T ss_pred             HHHHH---HHHhc---CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcc
Confidence            22222   22222   478999999999999999999999998877 68899999998887533221       1   12


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      ..++|++..|+.+++++++++++|++|||+ .+|+++|+.+|+..+ ++ +...+.+.+++
T Consensus       148 ~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs-~~Di~aa~~ag~~i~-~~-~~~~~~~~a~~  205 (219)
T TIGR00338       148 VDASYKGKTLLILLRKEGISPENTVAVGDG-ANDLSMIKAAGLGIA-FN-AKPKLQQKADI  205 (219)
T ss_pred             cCCcccHHHHHHHHHHcCCCHHHEEEEECC-HHHHHHHHhCCCeEE-eC-CCHHHHHhchh
Confidence            235678999999999999999999999999 899999999999864 42 33334444433

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.88  E-value=4.1e-22  Score=147.80  Aligned_cols=103  Identities=33%  Similarity=0.494  Sum_probs=85.8

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch----------------HHHHHHHhcCcccc--cc-eEEecCCCCCCCCCHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT----------------RLRKLLKDLNVIDL--FD-AVVISSEVGCEKPDPR  203 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~----------------~~~~~l~~~gl~~~--f~-~i~~~~~~~~~Kp~~~  203 (261)
                      +.++||+.++|+.|+++|++++|+||.+.                .+...++.+|+...  |. ....++..+..||+++
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~  105 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPG  105 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHH
Confidence            37899999999999999999999999762                25667888887521  11 1111355567899999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +|+.+++++|+++++|++|||+ ..|+++|+++|+.++++.++
T Consensus       106 ~~~~~~~~~~~~~~e~i~IGDs-~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       106 LILEALKRLGVDASRSLVVGDR-LRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             HHHHHHHHcCCChHHEEEEcCC-HHHHHHHHHCCCCEEEecCC
Confidence            9999999999999999999999 89999999999999999764

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.87  E-value=5.2e-21  Score=149.58  Aligned_cols=103  Identities=22%  Similarity=0.203  Sum_probs=86.8

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCC----------CHHHHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKP----------DPRIFKAALDQ  211 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp----------~~~~~~~~~~~  211 (261)
                      ..++||+.++|+.|+++|++++|+||+... +..+++.+|+..+|+..+.+++.+..+|          +++.+..+++.
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~  158 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE  158 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence            478999999999999999999999999887 7899999999888877666654443333          33688899999


Q ss_pred             cCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          212 MSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       212 l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +|++++++++|||+ .+|+++|+.+|+..+..+.+
T Consensus       159 ~~~~~~~~i~iGDs-~~D~~~a~~ag~~~a~~~~~  192 (201)
T TIGR01491       159 LNPSLTETVAVGDS-KNDLPMFEVADISISLGDEG  192 (201)
T ss_pred             hCCCHHHEEEEcCC-HhHHHHHHhcCCeEEECCCc
Confidence            99999999999999 89999999999988655443

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.87  E-value=6.2e-21  Score=142.76  Aligned_cols=112  Identities=25%  Similarity=0.470  Sum_probs=98.8

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCc---------------hH-HHHHHHhcCcccccceEE-e----cCCCCCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFD---------------TR-LRKLLKDLNVIDLFDAVV-I----SSEVGCEKPD  201 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~---------------~~-~~~~l~~~gl~~~f~~i~-~----~~~~~~~Kp~  201 (261)
                      +.++||+.++|+.|+++|++++|+||.+               .. +...++.+|+.  |+.++ +    +++.+..||+
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~  105 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPK  105 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCC
Confidence            4899999999999999999999999963               22 57778899986  77554 4    4778889999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +++|..+++++++++++++||||+ ..|+++|+++|+.++++.++.-+|+-+++-+
T Consensus       106 ~~~~~~~~~~~~~~~~e~l~IGD~-~~Di~~A~~aGi~~i~~~~~~~~~~~~~~~~  160 (161)
T TIGR01261       106 IKLLEPYLKKNLIDKARSYVIGDR-ETDMQLAENLGIRGIQYDEEELNWDMIAEEL  160 (161)
T ss_pred             HHHHHHHHHHcCCCHHHeEEEeCC-HHHHHHHHHCCCeEEEEChhhcCHHHHHHHh
Confidence            999999999999999999999998 8999999999999999999988888777643

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.86  E-value=1.5e-20  Score=144.46  Aligned_cols=102  Identities=24%  Similarity=0.378  Sum_probs=86.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch---------------H-HHHHHHhcCcccccceEEec-----CCCCCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT---------------R-LRKLLKDLNVIDLFDAVVIS-----SEVGCEKPD  201 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~---------------~-~~~~l~~~gl~~~f~~i~~~-----~~~~~~Kp~  201 (261)
                      +.++||+.++|+.|+++|++++|+||.+.               . +...++.+|+  .|+.++.+     ++.+..||+
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~  105 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPK  105 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCC
Confidence            48899999999999999999999999762               1 3345666676  37777654     345678999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      |.+|..+++.+|++++++++|||+ .+|+++|+++|+.++++.++.
T Consensus       106 p~~~~~~~~~l~~~~~~~~~VgDs-~~Di~~A~~aG~~~i~v~~g~  150 (181)
T PRK08942        106 PGMLLSIAERLNIDLAGSPMVGDS-LRDLQAAAAAGVTPVLVRTGK  150 (181)
T ss_pred             HHHHHHHHHHcCCChhhEEEEeCC-HHHHHHHHHCCCeEEEEcCCC
Confidence            999999999999999999999999 799999999999999887664

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.86  E-value=1.3e-20  Score=137.45  Aligned_cols=97  Identities=29%  Similarity=0.476  Sum_probs=84.6

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCc--------hH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHc-C
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFD--------TR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQM-S  213 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~--------~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l-~  213 (261)
                      .++||+.++|+.|++.|++++++||+.        .. +...++.+|+.  ++.++.+.  +..||++++|+.+++++ +
T Consensus        25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~~KP~~~~~~~~~~~~~~  100 (132)
T TIGR01662        25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HCRKPKPGMFLEALKRFNE  100 (132)
T ss_pred             eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CCCCCChHHHHHHHHHcCC
Confidence            789999999999999999999999987        55 68889999986  34444444  57899999999999999 5


Q ss_pred             CCCCcEEEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          214 VEASRTVHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       214 ~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      ++|++++||||+...|+.+|+++|+.+|++.
T Consensus       101 ~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662       101 IDPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             CChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence            9999999999932899999999999999875

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.85  E-value=6.3e-20  Score=143.85  Aligned_cols=128  Identities=15%  Similarity=0.107  Sum_probs=99.0

Q ss_pred             HHHHhcCCC-chHHHHH-HHHHHhhCC-ceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhc---CcccccceE
Q 024886          117 VVSEATGCT-NDDYFEE-VYEYYAKGE-AWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDL---NVIDLFDAV  189 (261)
Q Consensus       117 ~~~~~~~~~-~~~~~~~-~~~~~~~~~-~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~---gl~~~f~~i  189 (261)
                      +........ .+.+.-. +.+.|.... ..+++||+.++|+.|+++|++++|+||++.. ++.+++..   ++.++|+.+
T Consensus        65 ~~~~d~k~~~lk~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~  144 (220)
T TIGR01691        65 EMDKDRKATPLKTLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGY  144 (220)
T ss_pred             HHHcCCCcchHHHHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceE
Confidence            333333333 4444444 344454422 2479999999999999999999999999877 56666664   677778877


Q ss_pred             EecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          190 VISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       190 ~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +... . ..||+++.|..+++++|++|++++||||+ ..|+++|+++|+.++++.++.
T Consensus       145 fd~~-~-g~KP~p~~y~~i~~~lgv~p~e~lfVgDs-~~Di~AA~~AG~~ti~v~r~g  199 (220)
T TIGR01691       145 FDTT-V-GLKTEAQSYVKIAGQLGSPPREILFLSDI-INELDAARKAGLHTGQLVRPG  199 (220)
T ss_pred             EEeC-c-ccCCCHHHHHHHHHHhCcChhHEEEEeCC-HHHHHHHHHcCCEEEEEECCC
Confidence            7532 3 37999999999999999999999999999 899999999999999886654

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PLN02954 phosphoserine phosphatase

Probab=99.84  E-value=3.8e-19  Score=141.44  Aligned_cols=170  Identities=17%  Similarity=0.155  Sum_probs=111.7

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      +.+|+|+||+||||+++.     .+..+++++|......+....   ..+.        ...........+.... . . 
T Consensus        10 ~~~k~viFDfDGTL~~~~-----~~~~~~~~~g~~~~~~~~~~~---~~~g--------~~~~~~~~~~~~~~~~-~-~-   70 (224)
T PLN02954         10 RSADAVCFDVDSTVCVDE-----GIDELAEFCGAGEAVAEWTAK---AMGG--------SVPFEEALAARLSLFK-P-S-   70 (224)
T ss_pred             ccCCEEEEeCCCcccchH-----HHHHHHHHcCChHHHHHHHHH---HHCC--------CCCHHHHHHHHHHHcC-C-C-
Confidence            468999999999999973     467778888764222222221   1110        1111222222222211 1 1 


Q ss_pred             HHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc--cccceEEec--------CC--
Q 024886          128 DYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI--DLFDAVVIS--------SE--  194 (261)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~--~~f~~i~~~--------~~--  194 (261)
                        .+.+.+.+... ...++||+.++|+.|+++|++++|+|++... ++.+++.+|+.  .+|+..+..        ..  
T Consensus        71 --~~~~~~~~~~~-~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~  147 (224)
T PLN02954         71 --LSQVEEFLEKR-PPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDEN  147 (224)
T ss_pred             --HHHHHHHHHHc-cCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCC
Confidence              12223333221 2368999999999999999999999999887 78999999986  355432111        11  


Q ss_pred             --CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          195 --VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       195 --~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                        ....++++..+..+++.+|.  +++++|||+ .+|+++|+.+|+..++
T Consensus       148 ~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs-~~Di~aa~~~~~~~~~  194 (224)
T PLN02954        148 EPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDG-ATDLEARKPGGADLFI  194 (224)
T ss_pred             CcccCCccHHHHHHHHHHHcCC--CceEEEeCC-HHHHHhhhcCCCCEEE
Confidence              12356788899999999885  689999999 8999999998887654

>PRK06769 hypothetical protein; Validated

Probab=99.84  E-value=5.9e-20  Score=139.73  Aligned_cols=104  Identities=18%  Similarity=0.206  Sum_probs=86.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch---------HHHHHHHhcCcccccceEE-ecCCCCCCCCCHHHHHHHHHHc
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT---------RLRKLLKDLNVIDLFDAVV-ISSEVGCEKPDPRIFKAALDQM  212 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~---------~~~~~l~~~gl~~~f~~i~-~~~~~~~~Kp~~~~~~~~~~~l  212 (261)
                      ..++||+.++|+.|+++|++++|+||...         .....++.+|+..+|.... ++++.+..||+|++|..+++++
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l  106 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKH  106 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHc
Confidence            37899999999999999999999999763         1233466677655443332 3455678899999999999999


Q ss_pred             CCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          213 SVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       213 ~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      |++|++|+||||+ ..|+++|+++|+.+|++.++.
T Consensus       107 ~~~p~~~i~IGD~-~~Di~aA~~aGi~~i~v~~g~  140 (173)
T PRK06769        107 GLDLTQCAVIGDR-WTDIVAAAKVNATTILVRTGA  140 (173)
T ss_pred             CCCHHHeEEEcCC-HHHHHHHHHCCCeEEEEecCC
Confidence            9999999999999 799999999999999987754

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.84  E-value=1e-20  Score=142.41  Aligned_cols=105  Identities=15%  Similarity=0.137  Sum_probs=94.4

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCC-chH-HHHHHHhcCcc---------cccceEEecCCCCCCCCCHHHHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNF-DTR-LRKLLKDLNVI---------DLFDAVVISSEVGCEKPDPRIFKAALDQ  211 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~-~~~-~~~~l~~~gl~---------~~f~~i~~~~~~~~~Kp~~~~~~~~~~~  211 (261)
                      ..++||+.++|+.|+++|++++|+||+ ... ++.+++.+|+.         .+|+.+++++.....||.+.+++.+.+.
T Consensus        44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~  123 (174)
T TIGR01685        44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKV  123 (174)
T ss_pred             EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhc
Confidence            589999999999999999999999987 665 68899999998         9999999998876677777788888888


Q ss_pred             c--CCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          212 M--SVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       212 l--~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      +  |++|++|+||||+ ..|+++|+++|+.++++..+..
T Consensus       124 ~~~gl~p~e~l~VgDs-~~di~aA~~aGi~~i~v~~g~~  161 (174)
T TIGR01685       124 DPSVLKPAQILFFDDR-TDNVREVWGYGVTSCYCPSGMD  161 (174)
T ss_pred             ccCCCCHHHeEEEcCh-hHhHHHHHHhCCEEEEcCCCcc
Confidence            7  8999999999999 8999999999999999977754

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.84  E-value=1.2e-19  Score=138.76  Aligned_cols=103  Identities=18%  Similarity=0.323  Sum_probs=85.8

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch---------------H-HHHHHHhcCcccccceEEec-----------CCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT---------------R-LRKLLKDLNVIDLFDAVVIS-----------SEV  195 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~---------------~-~~~~l~~~gl~~~f~~i~~~-----------~~~  195 (261)
                      +.++||+.++|+.|+++|++++|+||.+.               . +...+..+++.  |+.++.+           ++.
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~  102 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVC  102 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCC
Confidence            48899999999999999999999999874               1 23456666665  6776653           244


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeE-EEECCCCC
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC-WLWGIDVK  248 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~-i~v~~~~~  248 (261)
                      ...||+|++|..+++++|+++++++||||+ ..|+++|+++|+.+ +++..+..
T Consensus       103 ~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs-~~Di~aA~~aG~~~~i~v~~g~~  155 (176)
T TIGR00213       103 DCRKPKPGMLLQARKELHIDMAQSYMVGDK-LEDMQAGVAAKVKTNVLVRTGKP  155 (176)
T ss_pred             CCCCCCHHHHHHHHHHcCcChhhEEEEcCC-HHHHHHHHHCCCcEEEEEecCCc
Confidence            568999999999999999999999999998 89999999999998 68777643

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.83  E-value=3.9e-19  Score=147.04  Aligned_cols=181  Identities=18%  Similarity=0.180  Sum_probs=119.4

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      ..+++|+|||||||+..     +.+.++++..|.............   .        ............+....+ ...
T Consensus       108 ~~~~LvvfDmDGTLI~~-----e~i~eia~~~g~~~~v~~it~~~m---~--------Geldf~esl~~rv~~l~g-~~~  170 (322)
T PRK11133        108 RTPGLLVMDMDSTAIQI-----ECIDEIAKLAGTGEEVAEVTERAM---R--------GELDFEASLRQRVATLKG-ADA  170 (322)
T ss_pred             cCCCEEEEECCCCCcch-----HHHHHHHHHhCCchHHHHHHHHHH---c--------CCcCHHHHHHHHHHHhCC-CCH
Confidence            36799999999999943     467888888877533322222111   0        111111111111111111 112


Q ss_pred             HHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccc-------eEEecC---CCC
Q 024886          128 DYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFD-------AVVISS---EVG  196 (261)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~-------~i~~~~---~~~  196 (261)
                      ...+.+.    .  ..+++||+.++++.|++.|++++|+|++... .+.+++.+|+...+.       ..+...   ...
T Consensus       171 ~il~~v~----~--~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv  244 (322)
T PRK11133        171 NILQQVR----E--NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIV  244 (322)
T ss_pred             HHHHHHH----H--hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccC
Confidence            2222222    1  1478999999999999999999999998876 577888888865442       222221   223


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                      .+|||++.++.+++++|++++++++|||+ .+|+.|++.+|++.++  ++.+.+++.+
T Consensus       245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg-~NDl~m~~~AGlgiA~--nAkp~Vk~~A  299 (322)
T PRK11133        245 DAQYKADTLTRLAQEYEIPLAQTVAIGDG-ANDLPMIKAAGLGIAY--HAKPKVNEQA  299 (322)
T ss_pred             CcccHHHHHHHHHHHcCCChhhEEEEECC-HHHHHHHHHCCCeEEe--CCCHHHHhhC
Confidence            46899999999999999999999999999 7999999999998865  5544444443

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.83  E-value=4.6e-19  Score=133.33  Aligned_cols=181  Identities=18%  Similarity=0.261  Sum_probs=125.7

Q ss_pred             cccEEEEccCCccccccccHHHHHH----HHH-HHhCCCCCHHH-HHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYA----SIA-RKYGLNVDSAD-IKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT  122 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~----~~~-~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (261)
                      ..++++||+|+||+.....+..+.+    +++ .++|++-.... ....+.+.++..              ...+.....
T Consensus        14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t--------------~aGL~~~~~   79 (244)
T KOG3109|consen   14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLT--------------MAGLKAVGY   79 (244)
T ss_pred             cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHH--------------HHHHHHhcc
Confidence            6899999999999998777766555    333 34676532221 112222222211              011111111


Q ss_pred             CCCchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC-----
Q 024886          123 GCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG-----  196 (261)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~-----  196 (261)
                      .....++...+..... ...+++.+-.+++|-.|++.  +.+++||++.. +..+|+.+|+.+.|+++++.+-..     
T Consensus        80 ~~d~deY~~~V~~~LP-lq~LkPD~~LRnlLL~l~~r--~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~  156 (244)
T KOG3109|consen   80 IFDADEYHRFVHGRLP-LQDLKPDPVLRNLLLSLKKR--RKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKT  156 (244)
T ss_pred             cCCHHHHHHHhhccCc-HhhcCCCHHHHHHHHhCccc--cEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCc
Confidence            1112232222222111 11257778888999888876  38999999987 799999999999999999987544     


Q ss_pred             -CCCCCHHHHHHHHHHcCCC-CCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          197 -CEKPDPRIFKAALDQMSVE-ASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       197 -~~Kp~~~~~~~~~~~l~~~-~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                       .+||.+++|+.+.+..|++ |.+++||.|| .++|+.|++.||.+++++...
T Consensus       157 ~vcKP~~~afE~a~k~agi~~p~~t~FfDDS-~~NI~~ak~vGl~tvlv~~~~  208 (244)
T KOG3109|consen  157 VVCKPSEEAFEKAMKVAGIDSPRNTYFFDDS-ERNIQTAKEVGLKTVLVGREH  208 (244)
T ss_pred             eeecCCHHHHHHHHHHhCCCCcCceEEEcCc-hhhHHHHHhccceeEEEEeee
Confidence             6899999999999999998 9999999998 899999999999999886653

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.82  E-value=1.2e-19  Score=136.68  Aligned_cols=96  Identities=21%  Similarity=0.294  Sum_probs=83.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-------------HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-------------LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALD  210 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-------------~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  210 (261)
                      .++||+.++|+.|++.|++++|+||.+..             +..+++.+|+.  ++.+++++.....||+++++..+++
T Consensus        42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~~KP~p~~~~~~~~  119 (166)
T TIGR01664        42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLYRKPMTGMWEYLQS  119 (166)
T ss_pred             EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCCCCCccHHHHHHHH
Confidence            47899999999999999999999997642             46788999985  3666777666678999999999999


Q ss_pred             HcC--CCCCcEEEEcCCc-------hhhhHHHHhCCCeEE
Q 024886          211 QMS--VEASRTVHIGDDE-------KADKQGANSLGIDCW  241 (261)
Q Consensus       211 ~l~--~~~~~~l~iGD~~-------~~Di~~a~~~G~~~i  241 (261)
                      ++|  +++++++||||+.       ..|+++|+++|+.++
T Consensus       120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~  159 (166)
T TIGR01664       120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFK  159 (166)
T ss_pred             HcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcC
Confidence            999  9999999999982       269999999999985

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.81  E-value=8.4e-19  Score=138.52  Aligned_cols=95  Identities=15%  Similarity=0.120  Sum_probs=80.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCC----chH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNF----DTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~----~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      .+.+++.++|+.|+++|++++++||.    ... .+.+++.+|+..+|+.+++++.....||++.   ..++++++    
T Consensus       114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i----  186 (237)
T TIGR01672       114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI----  186 (237)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC----
Confidence            66777999999999999999999997    444 5778889999999999999888777788764   35567776    


Q ss_pred             EEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          219 TVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++||||+ .+|+.+|+++|+.++.+..+
T Consensus       187 ~i~vGDs-~~DI~aAk~AGi~~I~V~~g  213 (237)
T TIGR01672       187 RIHYGDS-DNDITAAKEAGARGIRILRA  213 (237)
T ss_pred             eEEEeCC-HHHHHHHHHCCCCEEEEEec
Confidence            7999999 89999999999999887655

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.81  E-value=8.6e-19  Score=138.75  Aligned_cols=167  Identities=15%  Similarity=0.137  Sum_probs=108.8

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchHH
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDY  129 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (261)
                      .++|+||+||||++.+...     .++++++. ...+++...+.   .        ......+..+..+......    .
T Consensus         3 ~~~vifDfDgTi~~~d~~~-----~~~~~~~~-~~~~~i~~~~~---~--------g~~~~~~~~~~~~~~l~~~----~   61 (219)
T PRK09552          3 SIQIFCDFDGTITNNDNII-----AIMKKFAP-PEWEELKDDIL---S--------QELSIQEGVGQMFQLLPSN----L   61 (219)
T ss_pred             CcEEEEcCCCCCCcchhhH-----HHHHHhCH-HHHHHHHHHHH---h--------CCcCHHHHHHHHHHhCCCC----c
Confidence            4589999999999987543     24444432 11222222111   0        1111122233333332211    1


Q ss_pred             HHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc--cc--ceEEecCCCCCCCCCHHH
Q 024886          130 FEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID--LF--DAVVISSEVGCEKPDPRI  204 (261)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~--~f--~~i~~~~~~~~~Kp~~~~  204 (261)
                      .+++.+.+...  ..++||+.++|+.|+++|++++|+|++... +..+++.+ +..  .+  +..+..+.....||+|..
T Consensus        62 ~~~~~~~~~~~--~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~  138 (219)
T PRK09552         62 KEEIIQFLLET--AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCD  138 (219)
T ss_pred             hHHHHHHHHhC--CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCcc
Confidence            23444444332  489999999999999999999999999887 78889887 543  22  334455555666777653


Q ss_pred             ----------HHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEE
Q 024886          205 ----------FKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       205 ----------~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                                ...++++++..+.++++|||+ .+|+.+|+.+|+..+
T Consensus       139 ~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs-~~Di~aa~~Ag~~~a  184 (219)
T PRK09552        139 EHCQNHCGCCKPSLIRKLSDTNDFHIVIGDS-ITDLEAAKQADKVFA  184 (219)
T ss_pred             ccccccCCCchHHHHHHhccCCCCEEEEeCC-HHHHHHHHHCCccee
Confidence                      357889999999999999999 899999999999443

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.79  E-value=1.3e-18  Score=127.19  Aligned_cols=100  Identities=29%  Similarity=0.400  Sum_probs=90.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCC----------------CCCHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCE----------------KPDPRIF  205 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~----------------Kp~~~~~  205 (261)
                      ..+++++.++++.|+++|++++++|++... +..+++.+|+..+++.+++++.....                ||++..+
T Consensus        23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (139)
T cd01427          23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL  102 (139)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence            488999999999999999999999998877 78999999998888988887765544                9999999


Q ss_pred             HHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEE
Q 024886          206 KAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLW  243 (261)
Q Consensus       206 ~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v  243 (261)
                      ..+.+.++.+++++++|||+ .+|+++++++|+.++++
T Consensus       103 ~~~~~~~~~~~~~~~~igD~-~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         103 LAALKLLGVDPEEVLMVGDS-LNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             HHHHHHcCCChhhEEEeCCC-HHHHHHHHHcCCceeeC
Confidence            99999999999999999999 79999999999998764

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.78  E-value=7e-18  Score=140.37  Aligned_cols=115  Identities=22%  Similarity=0.427  Sum_probs=99.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCc---------------hH-HHHHHHhcCcccccceEEec-----CCCCCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFD---------------TR-LRKLLKDLNVIDLFDAVVIS-----SEVGCEKPD  201 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~---------------~~-~~~~l~~~gl~~~f~~i~~~-----~~~~~~Kp~  201 (261)
                      ..++||+.++|+.|+++|++++|+||.+               .. +..+++.+|+.  |+.++.+     ++.+..||+
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~  106 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPK  106 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCC
Confidence            3899999999999999999999999951               22 45677888874  6666543     556788999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhhhcc
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRILIT  260 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~~~  260 (261)
                      +.++..+++.+++++++++||||+ ..|+++|+++|+.+++++...-+|+++++.|..+
T Consensus       107 p~~l~~a~~~l~v~~~~svmIGDs-~sDi~aAk~aGi~~I~v~~~~~~~~~i~~~l~~~  164 (354)
T PRK05446        107 TGLVEEYLAEGAIDLANSYVIGDR-ETDVQLAENMGIKGIRYARETLNWDAIAEQLTKR  164 (354)
T ss_pred             HHHHHHHHHHcCCCcccEEEEcCC-HHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhcC
Confidence            999999999999999999999998 8999999999999999999899999999887643

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.76  E-value=1.1e-17  Score=126.89  Aligned_cols=101  Identities=25%  Similarity=0.171  Sum_probs=84.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCc-hH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFD-TR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~-~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      .++||+.++|+.|++.|++++++||++ .. +..+++.+|+..+         .+..||++++|..+++++|++++++++
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~---------~~~~KP~p~~~~~~l~~~~~~~~~~l~  113 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL---------PHAVKPPGCAFRRAHPEMGLTSEQVAV  113 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE---------cCCCCCChHHHHHHHHHcCCCHHHEEE
Confidence            668899999999999999999999988 45 5666677776422         134699999999999999999999999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      |||+...|+++|+++|+.++++..+..+.+.+
T Consensus       114 IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~  145 (170)
T TIGR01668       114 VGDRLFTDVMGGNRNGSYTILVEPLVHPDQWF  145 (170)
T ss_pred             ECCcchHHHHHHHHcCCeEEEEccCcCCcccc
Confidence            99994379999999999999998886554433

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.76  E-value=4e-17  Score=127.99  Aligned_cols=97  Identities=18%  Similarity=0.182  Sum_probs=76.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC----CCCCCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE----VGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~----~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      .+++||+.++|+.|++. ++++|+||+... ++.+++.+|+..+|+..+..++    .+..++.|.....+++.++..++
T Consensus        67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~  145 (205)
T PRK13582         67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY  145 (205)
T ss_pred             CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence            47899999999999999 999999999988 7889999999888865443321    12223334455666677777789


Q ss_pred             cEEEEcCCchhhhHHHHhCCCeEE
Q 024886          218 RTVHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       218 ~~l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                      ++++|||+ .+|+++++.+|++..
T Consensus       146 ~~v~iGDs-~~D~~~~~aa~~~v~  168 (205)
T PRK13582        146 RVIAAGDS-YNDTTMLGEADAGIL  168 (205)
T ss_pred             eEEEEeCC-HHHHHHHHhCCCCEE
Confidence            99999999 899999999998664

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.75  E-value=5.3e-17  Score=127.04  Aligned_cols=122  Identities=16%  Similarity=0.091  Sum_probs=92.0

Q ss_pred             hcCCCchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccce-EEecCC----
Q 024886          121 ATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDA-VVISSE----  194 (261)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~-i~~~~~----  194 (261)
                      ..+...+++.....+.+...-...++|++.++++.++++|++++|+|++... ++.+++.+|+..+|.. +...++    
T Consensus        64 ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~  143 (202)
T TIGR01490        64 LAGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYT  143 (202)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEe
Confidence            3455555554444444433222478999999999999999999999999887 7889999999877754 222111    


Q ss_pred             ------CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEE
Q 024886          195 ------VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLW  243 (261)
Q Consensus       195 ------~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v  243 (261)
                            ...++++...++.++++.+++++++++|||+ .+|+++++.+|...+..
T Consensus       144 g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs-~~D~~~~~~a~~~~~v~  197 (202)
T TIGR01490       144 GNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDS-ISDLPLLSLVGHPYVVN  197 (202)
T ss_pred             CCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCC-cccHHHHHhCCCcEEeC
Confidence                  1234667778999999999999999999999 79999999999887544

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.75  E-value=1.1e-16  Score=123.81  Aligned_cols=93  Identities=16%  Similarity=0.224  Sum_probs=78.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC--------------------CCCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE--------------------VGCEKPD  201 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~--------------------~~~~Kp~  201 (261)
                      .+++||+.++++.|++.|++++|+||+... ++.+++.+|+..+|+.+++++.                    ...+.+|
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K  150 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK  150 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence            488999999999999999999999998877 7889999999999999987532                    1233456


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCe
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGID  239 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~  239 (261)
                      +..++.+.+.+   ++++++|||+ .+|+.+|+.+++-
T Consensus       151 ~~~~~~~~~~~---~~~~i~iGD~-~~D~~aa~~~d~~  184 (188)
T TIGR01489       151 GKVIHKLSEPK---YQHIIYIGDG-VTDVCPAKLSDVV  184 (188)
T ss_pred             HHHHHHHHhhc---CceEEEECCC-cchhchHhcCCcc
Confidence            77888887765   7999999999 8999999998754

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.74  E-value=1e-17  Score=137.20  Aligned_cols=110  Identities=19%  Similarity=0.232  Sum_probs=90.0

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchH-H-HHHHHhcCcccccceEEe---cCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTR-L-RKLLKDLNVIDLFDAVVI---SSEVGCEKPDPRIFKAALDQMSVEASRTV  220 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~-~-~~~l~~~gl~~~f~~i~~---~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  220 (261)
                      |+++.++++.|++.|. ++|+||.+.. . ...+...|...+|+.+..   .+....+||+|.+|..+++++|++|++++
T Consensus       145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~l  223 (279)
T TIGR01452       145 YAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTL  223 (279)
T ss_pred             HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEE
Confidence            6889999999998886 7899997754 2 223344566666665543   34455789999999999999999999999


Q ss_pred             EEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          221 HIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       221 ~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      ||||+...||++|+++|+.+++|.+|..+.+++.+.
T Consensus       224 mIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~  259 (279)
T TIGR01452       224 MVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEY  259 (279)
T ss_pred             EECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhh
Confidence            999995699999999999999999999998888754

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.73  E-value=2.3e-16  Score=123.29  Aligned_cols=173  Identities=22%  Similarity=0.246  Sum_probs=119.9

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      +++++++|||||||++     ...+..+.+..|...   +....-.....        +........+..+....+.+..
T Consensus         3 ~~~~L~vFD~D~TLi~-----~~~~~~~~~~~g~~~---~v~~~t~~~~~--------~~~~~~~~~~~~v~~l~g~~~~   66 (212)
T COG0560           3 RMKKLAVFDLDGTLIN-----AELIDELARGAGVGE---EVLAITERAMR--------GELDFEESLRLRVALLKGLPVE   66 (212)
T ss_pred             CccceEEEecccchhh-----HHHHHHHHHHhCCHH---HHHHHHHHHhc--------ccccHHHHHHHHHHHhCCCCHH
Confidence            3568999999999998     345666666666542   11111111111        0011122333333444444333


Q ss_pred             HHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC---CC-------
Q 024886          128 DYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE---VG-------  196 (261)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~---~~-------  196 (261)
                       ..+++.+.+     .+++||+.++++.|++.|++++|+|++... ++.+.+.+|++..+...+..++   .+       
T Consensus        67 -~v~~~~~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~  140 (212)
T COG0560          67 -VLEEVREEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPIC  140 (212)
T ss_pred             -HHHHHHHhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeec
Confidence             334444433     488999999999999999999999999988 6999999999877765555543   11       


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEE
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLW  243 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v  243 (261)
                      .++.+......+++.+|++++++++|||+ .||+.|...+|.+.+.-
T Consensus       141 ~~~~K~~~l~~~~~~~g~~~~~~~a~gDs-~nDlpml~~ag~~ia~n  186 (212)
T COG0560         141 DGEGKAKALRELAAELGIPLEETVAYGDS-ANDLPMLEAAGLPIAVN  186 (212)
T ss_pred             CcchHHHHHHHHHHHcCCCHHHeEEEcCc-hhhHHHHHhCCCCeEeC
Confidence            23446678899999999999999999999 89999999999887543

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.73  E-value=8.5e-16  Score=119.52  Aligned_cols=173  Identities=18%  Similarity=0.207  Sum_probs=110.5

Q ss_pred             cEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHh--cCCCchH
Q 024886           51 DAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEA--TGCTNDD  128 (261)
Q Consensus        51 k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  128 (261)
                      .+++||+||||++.      .|.+++.+.|..  ......     ..         ......+....+.-.  .+.....
T Consensus         2 ~la~FDlD~TLi~~------~w~~~~~~~g~~--~~~~~~-----~~---------~~~~~~~~~~r~~ll~~~g~~~~~   59 (203)
T TIGR02137         2 EIACLDLEGVLVPE------IWIAFAEKTGID--ALKATT-----RD---------IPDYDVLMKQRLRILDEHGLKLGD   59 (203)
T ss_pred             eEEEEeCCcccHHH------HHHHHHHHcCCc--HHHHHh-----cC---------CcCHHHHHHHHHHHHHHCCCCHHH
Confidence            56999999999974      488888888853  111110     00         000111111111111  1333333


Q ss_pred             HHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceE--------EecCCCCCCC
Q 024886          129 YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAV--------VISSEVGCEK  199 (261)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i--------~~~~~~~~~K  199 (261)
                      +    .+....   .+++||+.++++.|++.+ +++|+|++... +..+++.+|+..+|...        ++.... ..+
T Consensus        60 i----~~~~~~---i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~-~~~  130 (203)
T TIGR02137        60 I----QEVIAT---LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQL-RQK  130 (203)
T ss_pred             H----HHHHHh---CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeee-cCc
Confidence            3    222222   478999999999999975 99999999888 78999999998877522        211111 234


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC-----------CCChHHHHHhhh
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID-----------VKTFSDVQNRIL  258 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~-----------~~~~~el~~~l~  258 (261)
                      +.+..+...++..+.   ++++|||+ .+|+.+++.+|.+.+....+           +.+..||.+.+.
T Consensus       131 ~~K~~~l~~l~~~~~---~~v~vGDs-~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~  196 (203)
T TIGR02137       131 DPKRQSVIAFKSLYY---RVIAAGDS-YNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFL  196 (203)
T ss_pred             chHHHHHHHHHhhCC---CEEEEeCC-HHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCHHHHHHHHH
Confidence            444444444456553   79999999 89999999999998766544           566777776653

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.72  E-value=5.4e-18  Score=137.01  Aligned_cols=104  Identities=23%  Similarity=0.198  Sum_probs=87.3

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC---CCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG---CEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~---~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      |+++.+.++.|++.+.+++++||.+.. ....+...|+..+|+.+..+....   .+||+|.+|+.+++++|++|+++++
T Consensus       122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~  201 (257)
T TIGR01458       122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVM  201 (257)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEE
Confidence            578888999999888999999997765 445556678888888776654433   3799999999999999999999999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCCCCC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGIDVKT  249 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~~~~  249 (261)
                      |||+...|+.+|+++|+.+++|.++...
T Consensus       202 vGD~~~~Di~~a~~~G~~~i~v~~G~~~  229 (257)
T TIGR01458       202 IGDDCRDDVGGAQDCGMRGIQVRTGKYR  229 (257)
T ss_pred             ECCCcHHHHHHHHHcCCeEEEECCCCCC
Confidence            9999559999999999999999887543

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.71  E-value=7.2e-17  Score=116.54  Aligned_cols=87  Identities=16%  Similarity=0.214  Sum_probs=75.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCC-chH-HHHHHHhcC-------cccccceEEecCCCCCCCCCHHHHHHHHHHcC-
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNF-DTR-LRKLLKDLN-------VIDLFDAVVISSEVGCEKPDPRIFKAALDQMS-  213 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~-~~~-~~~~l~~~g-------l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~-  213 (261)
                      +++||+.++|+.|+++|++++++||+ ... ....++..+       +..+|+.+++++.    +|+|+.|..+++++| 
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg~  104 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLNG  104 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhcC
Confidence            57899999999999999999999998 666 577788888       7889998887753    588889999999999 


Q ss_pred             -CCCCcEEEEcCCchhhhHHHHh
Q 024886          214 -VEASRTVHIGDDEKADKQGANS  235 (261)
Q Consensus       214 -~~~~~~l~iGD~~~~Di~~a~~  235 (261)
                       ++|++|+||||+ ..|++..++
T Consensus       105 ~~~p~~~l~igDs-~~n~~~~~~  126 (128)
T TIGR01681       105 VLKPKSILFVDDR-PDNNEEVDY  126 (128)
T ss_pred             CCCcceEEEECCC-HhHHHHHHh
Confidence             999999999999 788876653

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.70  E-value=1.3e-17  Score=124.48  Aligned_cols=90  Identities=17%  Similarity=0.266  Sum_probs=77.4

Q ss_pred             HHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          152 SILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      +++.|+++|++++|+||.+.. +...++.+|+..+|+.         .+|+++.+..+++++|++++++++|||+ .+|+
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs-~~D~  105 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDD-LIDW  105 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCC-HHHH
Confidence            799999999999999998877 7889999998777652         3788999999999999999999999999 7999


Q ss_pred             HHHHhCCCeEEEECCCCCChHH
Q 024886          231 QGANSLGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       231 ~~a~~~G~~~i~v~~~~~~~~e  252 (261)
                      ++++.+|+. +.+.++......
T Consensus       106 ~~~~~ag~~-~~v~~~~~~~~~  126 (154)
T TIGR01670       106 PVMEKVGLS-VAVADAHPLLIP  126 (154)
T ss_pred             HHHHHCCCe-EecCCcCHHHHH
Confidence            999999997 577666443333

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.69  E-value=2.9e-16  Score=113.70  Aligned_cols=93  Identities=29%  Similarity=0.360  Sum_probs=82.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ..-|.+++.+.+++..|.++.|+||+... +..+.+.+|+    +++     ....||.+..|..+++++++++++|++|
T Consensus        46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v----~fi-----~~A~KP~~~~fr~Al~~m~l~~~~vvmV  116 (175)
T COG2179          46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV----PFI-----YRAKKPFGRAFRRALKEMNLPPEEVVMV  116 (175)
T ss_pred             CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC----cee-----ecccCccHHHHHHHHHHcCCChhHEEEE
Confidence            44566778899999999999999998876 8889999986    455     3578999999999999999999999999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECC
Q 024886          223 GDDEKADKQGANSLGIDCWLWGI  245 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~  245 (261)
                      ||..-.||.++.++|+.+|+|-.
T Consensus       117 GDqL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179         117 GDQLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             cchhhhhhhcccccCcEEEEEEE
Confidence            99999999999999999998743

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.69  E-value=3.8e-17  Score=122.80  Aligned_cols=96  Identities=17%  Similarity=0.370  Sum_probs=80.6

Q ss_pred             HHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhh
Q 024886          151 QSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKAD  229 (261)
Q Consensus       151 ~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~D  229 (261)
                      ..+..|++.|++++|+||.+.. +...++.+|+..+|+.+         ||+|+.+..+++++|++++++++|||+ .+|
T Consensus        41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~---------kpkp~~~~~~~~~l~~~~~ev~~iGD~-~nD  110 (169)
T TIGR02726        41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI---------KKKTEPYAQMLEEMNISDAEVCYVGDD-LVD  110 (169)
T ss_pred             HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC---------CCCHHHHHHHHHHcCcCHHHEEEECCC-HHH
Confidence            4566788899999999998877 79999999998777632         799999999999999999999999999 799


Q ss_pred             hHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          230 KQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       230 i~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +.+++.+|++. .+.++...+.++++++
T Consensus       111 i~~~~~ag~~~-am~nA~~~lk~~A~~I  137 (169)
T TIGR02726       111 LSMMKRVGLAV-AVGDAVADVKEAAAYV  137 (169)
T ss_pred             HHHHHHCCCeE-ECcCchHHHHHhCCEE
Confidence            99999999887 5666655555555443

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.68  E-value=2.5e-16  Score=130.72  Aligned_cols=102  Identities=19%  Similarity=0.242  Sum_probs=92.6

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc-ccceEEecC-------CCCCCCCCHHHHHHHHHHcCC
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID-LFDAVVISS-------EVGCEKPDPRIFKAALDQMSV  214 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~-~f~~i~~~~-------~~~~~Kp~~~~~~~~~~~l~~  214 (261)
                      .++||+.++++.|++.|++++++||.+.. ....++.+++.. +|+.+++.+       +.+..||+|..+..++++++.
T Consensus       187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~  266 (300)
T PHA02530        187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIA  266 (300)
T ss_pred             CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhc
Confidence            78999999999999999999999999877 688899999886 899998887       455689999999999999988


Q ss_pred             -CCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          215 -EASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       215 -~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                       ++++|++|||+ .+|+++|+++|+.+++|..|
T Consensus       267 ~~~~~~~~vgD~-~~d~~~a~~~Gi~~i~v~~g  298 (300)
T PHA02530        267 PKYDVLLAVDDR-DQVVDMWRRIGLECWQVAPG  298 (300)
T ss_pred             cCceEEEEEcCc-HHHHHHHHHhCCeEEEecCC
Confidence             67999999999 89999999999999998654

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.67  E-value=1.8e-15  Score=115.83  Aligned_cols=93  Identities=18%  Similarity=0.221  Sum_probs=76.0

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC------------CCCCCCCHHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE------------VGCEKPDPRIFKAAL  209 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~------------~~~~Kp~~~~~~~~~  209 (261)
                      .+++||+.++++.++++|++++|+|++... ++.+++.+|+...|...+..++            ...+..|+..+..++
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~  151 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL  151 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence            367899999999999999999999999887 7899999998877654443321            123344567888889


Q ss_pred             HHcCCCCCcEEEEcCCchhhhHHHHhC
Q 024886          210 DQMSVEASRTVHIGDDEKADKQGANSL  236 (261)
Q Consensus       210 ~~l~~~~~~~l~iGD~~~~Di~~a~~~  236 (261)
                      +.+|++++++++|||+ .+|+.+++.+
T Consensus       152 ~~~~~~~~~~~~iGDs-~~D~~~~~~a  177 (177)
T TIGR01488       152 EESKITLKKIIAVGDS-VNDLPMLKLA  177 (177)
T ss_pred             HHhCCCHHHEEEEeCC-HHHHHHHhcC
Confidence            9999999999999999 8999998754

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.67  E-value=2.8e-15  Score=118.26  Aligned_cols=96  Identities=17%  Similarity=0.184  Sum_probs=76.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc---ceEEecCCCCCCCCCHHHH----------HHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF---DAVVISSEVGCEKPDPRIF----------KAA  208 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f---~~i~~~~~~~~~Kp~~~~~----------~~~  208 (261)
                      .+++||+.++++.|+++|++++|+|++... ++.+++.++....+   +..+..+.....||.+..+          ..+
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~  148 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL  148 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence            489999999999999999999999999877 68888887543333   3344444455667766554          467


Q ss_pred             HHHcCCCCCcEEEEcCCchhhhHHHHhCCCe
Q 024886          209 LDQMSVEASRTVHIGDDEKADKQGANSLGID  239 (261)
Q Consensus       209 ~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~  239 (261)
                      +++++..+++++||||+ .+|+.+|+.+|+.
T Consensus       149 l~~~~~~~~~~i~iGDg-~~D~~~a~~Ad~~  178 (214)
T TIGR03333       149 IRKLSEPNDYHIVIGDS-VTDVEAAKQSDLC  178 (214)
T ss_pred             HHHHhhcCCcEEEEeCC-HHHHHHHHhCCee
Confidence            77777789999999999 8999999999983

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.67  E-value=1.3e-15  Score=120.26  Aligned_cols=96  Identities=13%  Similarity=0.070  Sum_probs=78.1

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCc----hH-HHHHHHhcCc--ccccceEEecCCCCCCCCCHHHHHHHHHHcCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFD----TR-LRKLLKDLNV--IDLFDAVVISSEVGCEKPDPRIFKAALDQMSVE  215 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~----~~-~~~~l~~~gl--~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~  215 (261)
                      ..++||+.++|+.|+++|++++++||.+    .. .+.+++.+|+  ..+|+.+++.+.  ..||++..   .++++++ 
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~--~~K~~K~~---~l~~~~i-  186 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK--PGQYTKTQ---WLKKKNI-  186 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC--CCCCCHHH---HHHhcCC-
Confidence            4789999999999999999999999964    22 4666667999  888988887775  36777643   4556776 


Q ss_pred             CCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          216 ASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       216 ~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                         ++||||+ .+|+.+|+++|+.++.+..+..
T Consensus       187 ---~I~IGDs-~~Di~aA~~AGi~~I~v~~G~~  215 (237)
T PRK11009        187 ---RIFYGDS-DNDITAAREAGARGIRILRAAN  215 (237)
T ss_pred             ---eEEEcCC-HHHHHHHHHcCCcEEEEecCCC
Confidence               8999999 8999999999999998877644

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.64  E-value=7.1e-15  Score=117.58  Aligned_cols=61  Identities=30%  Similarity=0.488  Sum_probs=56.9

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      -.+||++.+|+.+++.++.+++++++|||++..||.+|.++|+.+++|.+|+.+.+++...
T Consensus       187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~  247 (269)
T COG0647         187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRA  247 (269)
T ss_pred             ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhh
Confidence            4689999999999999999999999999999999999999999999999999988886644

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.63  E-value=5.6e-16  Score=122.24  Aligned_cols=88  Identities=27%  Similarity=0.524  Sum_probs=77.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      +++|++.++++.|++.|++++++|+.... ...+.+.+|+.   +.++.+...  +||.+.+|..+++.+++++++|+||
T Consensus       127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~v  201 (215)
T PF00702_consen  127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI--GKPEPKIFLRIIKELQVKPGEVAMV  201 (215)
T ss_dssp             EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred             cchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc--ccccchhHHHHHHHHhcCCCEEEEE
Confidence            67899999999999999999999987776 79999999983   443433332  7999999999999999999999999


Q ss_pred             cCCchhhhHHHHhCC
Q 024886          223 GDDEKADKQGANSLG  237 (261)
Q Consensus       223 GD~~~~Di~~a~~~G  237 (261)
                      ||+ .||+.++++||
T Consensus       202 GDg-~nD~~al~~Ag  215 (215)
T PF00702_consen  202 GDG-VNDAPALKAAG  215 (215)
T ss_dssp             ESS-GGHHHHHHHSS
T ss_pred             ccC-HHHHHHHHhCc
Confidence            999 79999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.63  E-value=1.4e-15  Score=122.47  Aligned_cols=108  Identities=21%  Similarity=0.285  Sum_probs=81.0

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchHH-HH--HH-HhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTRL-RK--LL-KDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~~-~~--~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      |+.+...+..|+ .|.+ +++||.+... ..  .+ ..-.+...++...+.+....+||++.+|+.+++.++++++++++
T Consensus       123 y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~  200 (249)
T TIGR01457       123 YEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLM  200 (249)
T ss_pred             HHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEE
Confidence            455566677774 4666 8888876542 11  11 12223344555666666778899999999999999999999999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      |||+...|+.+|+++|+.+++|.++....+++..
T Consensus       201 VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~  234 (249)
T TIGR01457       201 VGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAG  234 (249)
T ss_pred             ECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhc
Confidence            9999558999999999999999999887776643

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PLN02645 phosphoglycolate phosphatase

Probab=99.61  E-value=3.1e-15  Score=124.32  Aligned_cols=106  Identities=16%  Similarity=0.099  Sum_probs=81.9

Q ss_pred             HHHHHHHHHCCCeEEEEeCCchHH--HHHHHhcCcccccceEEecCCCC---CCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 024886          150 YQSILLLKDAGVKVAVVSNFDTRL--RKLLKDLNVIDLFDAVVISSEVG---CEKPDPRIFKAALDQMSVEASRTVHIGD  224 (261)
Q Consensus       150 ~~~l~~L~~~g~~i~i~T~~~~~~--~~~l~~~gl~~~f~~i~~~~~~~---~~Kp~~~~~~~~~~~l~~~~~~~l~iGD  224 (261)
                      ...+..|+.++-..+|+||.+...  ...+...|...+|+.+..+....   .+||+|.+|..+++.+++++++++||||
T Consensus       176 ~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD  255 (311)
T PLN02645        176 QYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGD  255 (311)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcC
Confidence            334555654333688999977642  33345567777788777765433   4699999999999999999999999999


Q ss_pred             CchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          225 DEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       225 ~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      +..+|+.+|+++|+.+++|.+|..+.+++.+
T Consensus       256 ~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~  286 (311)
T PLN02645        256 RLDTDILFGQNGGCKTLLVLSGVTSESMLLS  286 (311)
T ss_pred             CcHHHHHHHHHcCCCEEEEcCCCCCHHHHHh
Confidence            9569999999999999999988877776643

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.60  E-value=3.4e-15  Score=114.59  Aligned_cols=85  Identities=18%  Similarity=0.327  Sum_probs=72.3

Q ss_pred             HHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhh
Q 024886          151 QSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKAD  229 (261)
Q Consensus       151 ~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~D  229 (261)
                      ..++.|++.|++++|+||.+.. +..+++.+|+..+|+         ..++++..+..+++++|+++++++||||+ .+|
T Consensus        55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~---------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs-~~D  124 (183)
T PRK09484         55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ---------GQSNKLIAFSDLLEKLAIAPEQVAYIGDD-LID  124 (183)
T ss_pred             HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec---------CCCcHHHHHHHHHHHhCCCHHHEEEECCC-HHH
Confidence            3567778899999999998877 789999999876664         13567889999999999999999999999 899


Q ss_pred             hHHHHhCCCeEEEECCC
Q 024886          230 KQGANSLGIDCWLWGID  246 (261)
Q Consensus       230 i~~a~~~G~~~i~v~~~  246 (261)
                      +.+++++|+.. .+.++
T Consensus       125 ~~~a~~aG~~~-~v~~~  140 (183)
T PRK09484        125 WPVMEKVGLSV-AVADA  140 (183)
T ss_pred             HHHHHHCCCeE-ecCCh
Confidence            99999999995 45543

>PRK11590 hypothetical protein; Provisional

Probab=99.60  E-value=6.9e-14  Score=110.01  Aligned_cols=181  Identities=11%  Similarity=0.005  Sum_probs=104.1

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHH-HHhCCCCCH-HHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC-
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIA-RKYGLNVDS-ADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT-  125 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  125 (261)
                      ..|+++||+||||++  ......+...+ +++|+.... ....    ...+............+..  .-+.....+.. 
T Consensus         5 ~~k~~iFD~DGTL~~--~d~~~~~~~~~~~~~g~~~~~~~~~~----~~ig~~l~~~~~~~~~~~~--~~~~~~~~g~~~   76 (211)
T PRK11590          5 ERRVVFFDLDGTLHQ--QDMFGSFLRYLLRRQPLNLLLVLPLL----PVIGLGLLVKGRAARWPMS--LLLWGCTFGHSE   76 (211)
T ss_pred             cceEEEEecCCCCcc--cchHHHHHHHHHHhcchhhHHHhHHH----HHhccCcccchhhhhhhHH--HHHHHHHcCCCH
Confidence            357899999999994  33555666666 777765322 2222    2222221111100000000  00111111222 


Q ss_pred             --chHHHHHHHHHHhhCCceeeCccHHHHH-HHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecC--------
Q 024886          126 --NDDYFEEVYEYYAKGEAWHLPHGAYQSI-LLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISS--------  193 (261)
Q Consensus       126 --~~~~~~~~~~~~~~~~~~~~~~g~~~~l-~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~--------  193 (261)
                        .++..+.+.+.|...  ..++||+.+.| +.+++.|++++|+||++.. ++.+++.+|+.. .+.+++++        
T Consensus        77 ~~~~~~~~~f~~~~~~~--~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~  153 (211)
T PRK11590         77 ARLQALEADFVRWFRDN--VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGW  153 (211)
T ss_pred             HHHHHHHHHHHHHHHHh--CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccE
Confidence              223334443434332  36799999999 5788889999999999987 688999988522 23344432        


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEE
Q 024886          194 EVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       194 ~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                      -.+..--..+-...+.+.++.+...+.++||| .+|+.+...+|-+.+
T Consensus       154 ~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds-~~D~pmL~~a~~~~~  200 (211)
T PRK11590        154 VLTLRCLGHEKVAQLERKIGTPLRLYSGYSDS-KQDNPLLYFCQHRWR  200 (211)
T ss_pred             ECCccCCChHHHHHHHHHhCCCcceEEEecCC-cccHHHHHhCCCCEE
Confidence            11110111222444555567778888999999 799999999997764

>PRK10444 UMP phosphatase; Provisional

Probab=99.59  E-value=6.7e-15  Score=118.05  Aligned_cols=69  Identities=26%  Similarity=0.391  Sum_probs=59.5

Q ss_pred             ceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          187 DAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       187 ~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      +.+.+.+....+||++.+|+.+++.++++++++++|||+...|+.+|+++|+.+++|.+|..+.+++.+
T Consensus       162 ~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~  230 (248)
T PRK10444        162 EKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDS  230 (248)
T ss_pred             HHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhc
Confidence            334444445568999999999999999999999999999668999999999999999999888887754

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.57  E-value=8.5e-14  Score=104.40  Aligned_cols=100  Identities=29%  Similarity=0.463  Sum_probs=83.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCc--------h-------H-HHHHHHhcCcccccceEEecCC-----CCCCCCCH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFD--------T-------R-LRKLLKDLNVIDLFDAVVISSE-----VGCEKPDP  202 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~--------~-------~-~~~~l~~~gl~~~f~~i~~~~~-----~~~~Kp~~  202 (261)
                      .+.||+.+++..|++.|++++++||.+        .       . +...++..|.  .|+.++.+..     ....||++
T Consensus        31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~  108 (181)
T COG0241          31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKP  108 (181)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCCh
Confidence            778999999999999999999999932        1       1 2344555565  4787777643     45789999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      .+++.++++++++++..++|||. ..|+++|.++|++.+.+.++
T Consensus       109 gm~~~~~~~~~iD~~~s~~VGD~-~~Dlq~a~n~gi~~~~~~~~  151 (181)
T COG0241         109 GMLLSALKEYNIDLSRSYVVGDR-LTDLQAAENAGIKGVLVLTG  151 (181)
T ss_pred             HHHHHHHHHhCCCccceEEecCc-HHHHHHHHHCCCCceEEEcC
Confidence            99999999999999999999998 89999999999998877666

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.55  E-value=1.9e-14  Score=115.65  Aligned_cols=98  Identities=22%  Similarity=0.182  Sum_probs=80.3

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceE--EecCCCCCCCCCHHHHHHHHHHcCCC-CCcEEE
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAV--VISSEVGCEKPDPRIFKAALDQMSVE-ASRTVH  221 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i--~~~~~~~~~Kp~~~~~~~~~~~l~~~-~~~~l~  221 (261)
                      ++++.++++.|+++|+++ |+||.+.. ....+..++...++..+  ++.+....+||++.+|+.+++++|.. +++++|
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~  218 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM  218 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence            578899999998889987 88998765 44556667766666644  45555568999999999999999975 679999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEEC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      |||+...|+.+|+++|+.+++|.
T Consensus       219 vGD~~~~Di~~a~~~G~~~i~v~  241 (242)
T TIGR01459       219 VGDSFYTDILGANRLGIDTALVL  241 (242)
T ss_pred             ECCCcHHHHHHHHHCCCeEEEEe
Confidence            99996699999999999999874

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.53  E-value=7.9e-14  Score=121.76  Aligned_cols=92  Identities=13%  Similarity=0.230  Sum_probs=79.6

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCch------------H-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDT------------R-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALD  210 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~------------~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  210 (261)
                      .++||+.+.|+.|++.|++++|+||...            . +..+++.+|+.  |+.+++.+.....||++.++..+++
T Consensus       197 ~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~  274 (526)
T TIGR01663       197 IIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKE  274 (526)
T ss_pred             ecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence            3689999999999999999999999655            2 56778888875  8888888877788999999999999


Q ss_pred             HcC----CCCCcEEEEcCCchhhhHHHHhCCC
Q 024886          211 QMS----VEASRTVHIGDDEKADKQGANSLGI  238 (261)
Q Consensus       211 ~l~----~~~~~~l~iGD~~~~Di~~a~~~G~  238 (261)
                      +++    +++++++||||+ ..|++++..+|-
T Consensus       275 ~~~~~~~Id~~~S~~VGDa-agr~~~g~~ag~  305 (526)
T TIGR01663       275 EANDGTEIQEDDCFFVGDA-AGRPANGKAAGK  305 (526)
T ss_pred             hcCcccCCCHHHeEEeCCc-ccchHHHHhcCC
Confidence            995    899999999998 788877776664

Note that the EC number for the kinase function is: 2.7.1.78

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=99.53  E-value=6.3e-13  Score=97.42  Aligned_cols=118  Identities=16%  Similarity=0.207  Sum_probs=90.0

Q ss_pred             chHHHHHHHHH-HhhCC-ceeeCccHHHHHHHHHHCCCeEEEEeCCchHH-HHHHH---hcCcccccceEEecCCCCCCC
Q 024886          126 NDDYFEEVYEY-YAKGE-AWHLPHGAYQSILLLKDAGVKVAVVSNFDTRL-RKLLK---DLNVIDLFDAVVISSEVGCEK  199 (261)
Q Consensus       126 ~~~~~~~~~~~-~~~~~-~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~-~~~l~---~~gl~~~f~~i~~~~~~~~~K  199 (261)
                      .+.+.-.+++. |.... ..++||++.+.+++.++.|.+++|.|.++... +.+..   ...+..+|++.+-..  -..|
T Consensus        83 lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt--iG~K  160 (229)
T COG4229          83 LKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT--IGKK  160 (229)
T ss_pred             HHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc--cccc
Confidence            33444444444 33321 25899999999999999999999999988764 43333   234666777776552  2357


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      .....|..++...|++|.+++|..|+ .+.+.+|+.+|+.++++.++
T Consensus       161 rE~~SY~kIa~~iGl~p~eilFLSDn-~~EL~AA~~vGl~t~l~~R~  206 (229)
T COG4229         161 RESQSYAKIAGDIGLPPAEILFLSDN-PEELKAAAGVGLATGLAVRP  206 (229)
T ss_pred             ccchhHHHHHHhcCCCchheEEecCC-HHHHHHHHhcchheeeeecC
Confidence            77789999999999999999999998 89999999999999877665

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.52  E-value=3.8e-14  Score=105.09  Aligned_cols=94  Identities=12%  Similarity=-0.050  Sum_probs=84.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc-ccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID-LFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV  220 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  220 (261)
                      ..++||+.++|+.|+ ++++++|+|++... ++.+++.+++.. +|+.+++.++....||+   |..+++.+|.+|++|+
T Consensus        44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~~i  119 (148)
T smart00577       44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSNVI  119 (148)
T ss_pred             EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhcEE
Confidence            588999999999998 56999999999987 788999999864 56999999999888987   8999999999999999


Q ss_pred             EEcCCchhhhHHHHhCCCeEE
Q 024886          221 HIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       221 ~iGD~~~~Di~~a~~~G~~~i  241 (261)
                      +|||+ ..|++++.++|+..-
T Consensus       120 ~i~Ds-~~~~~aa~~ngI~i~  139 (148)
T smart00577      120 IIDDS-PDSWPFHPENLIPIK  139 (148)
T ss_pred             EEECC-HHHhhcCccCEEEec
Confidence            99999 899999999998763

>TIGR01686 FkbH FkbH-like domain

Probab=99.51  E-value=7.7e-14  Score=116.48  Aligned_cols=90  Identities=19%  Similarity=0.232  Sum_probs=81.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh----cCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKD----LNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~----~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      .+++|+.++|+.|++.|+.++|+|+++.. +...++.    +++.++|+.+...     .||+++.+..+++++|+.+++
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~~  105 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTDS  105 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcCc
Confidence            45889999999999999999999998877 7889998    8888899888654     589999999999999999999


Q ss_pred             EEEEcCCchhhhHHHHhCCCe
Q 024886          219 TVHIGDDEKADKQGANSLGID  239 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~~  239 (261)
                      ++||||+ ..|+..+++++-.
T Consensus       106 ~vfidD~-~~d~~~~~~~lp~  125 (320)
T TIGR01686       106 FLFIDDN-PAERANVKITLPV  125 (320)
T ss_pred             EEEECCC-HHHHHHHHHHCCC
Confidence            9999999 8999999997754

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.49  E-value=8e-13  Score=108.15  Aligned_cols=110  Identities=7%  Similarity=0.010  Sum_probs=71.1

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCch--HH----HHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDT--RL----RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~--~~----~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      ++++.++++.++..+..+.++++.+.  ..    ..+.+.+++...+......+-...+..++.+++.+++.+|++++++
T Consensus       139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~  218 (272)
T PRK10530        139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNV  218 (272)
T ss_pred             eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHe
Confidence            46677777777666666666666431  12    3334444543111000011223334456779999999999999999


Q ss_pred             EEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          220 VHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ++|||+ .||++|++.+|+++ .++++...+++.++++
T Consensus       219 i~~GD~-~NDi~m~~~ag~~v-amgna~~~lk~~Ad~v  254 (272)
T PRK10530        219 VAFGDN-FNDISMLEAAGLGV-AMGNADDAVKARADLV  254 (272)
T ss_pred             EEeCCC-hhhHHHHHhcCceE-EecCchHHHHHhCCEE
Confidence            999999 89999999999854 7777765555555544

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.49  E-value=4.2e-12  Score=105.25  Aligned_cols=103  Identities=19%  Similarity=0.113  Sum_probs=84.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhc-C-------cccccceEEecCC-----------------CC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDL-N-------VIDLFDAVVISSE-----------------VG  196 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~-g-------l~~~f~~i~~~~~-----------------~~  196 (261)
                      +...||+.++|+.|+++|++++|+||++.. .+.+++.+ |       +.++||.++++..                 .+
T Consensus       183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g  262 (343)
T TIGR02244       183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETG  262 (343)
T ss_pred             hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCC
Confidence            456899999999999999999999999987 78889986 7       8899999987632                 11


Q ss_pred             CCCCCH------------HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHH-hCCCeEEEECC
Q 024886          197 CEKPDP------------RIFKAALDQMSVEASRTVHIGDDEKADKQGAN-SLGIDCWLWGI  245 (261)
Q Consensus       197 ~~Kp~~------------~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~-~~G~~~i~v~~  245 (261)
                      ..++..            .....+.+.+|+++++++||||+...|+..++ .+||.++++-.
T Consensus       263 ~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p  324 (343)
T TIGR02244       263 SLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP  324 (343)
T ss_pred             cccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence            111111            22578888899999999999999999999998 89999998855

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PRK08238 hypothetical protein; Validated

Probab=99.48  E-value=5.1e-12  Score=110.06  Aligned_cols=96  Identities=17%  Similarity=0.159  Sum_probs=80.0

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      .+++||+.++++.++++|++++++|+++.. ++.+++.+|+   ||.++++++....||++.. +.+.+.++  .+++++
T Consensus        71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~~y  144 (479)
T PRK08238         71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKA-AALVEAFG--ERGFDY  144 (479)
T ss_pred             CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCCchHH-HHHHHHhC--ccCeeE
Confidence            467899999999999999999999999988 6889999987   8999999987777776543 34556666  356899


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +||+ .+|+.+++.+| ..+.|+.+
T Consensus       145 vGDS-~~Dlp~~~~A~-~av~Vn~~  167 (479)
T PRK08238        145 AGNS-AADLPVWAAAR-RAIVVGAS  167 (479)
T ss_pred             ecCC-HHHHHHHHhCC-CeEEECCC
Confidence            9999 89999999999 66677554

>PTZ00445 p36-lilke protein; Provisional

Probab=99.48  E-value=4.9e-13  Score=101.57  Aligned_cols=102  Identities=19%  Similarity=0.145  Sum_probs=82.6

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----------------HHHHHHhcCcccccceEEecC-----------CCC
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----------------LRKLLKDLNVIDLFDAVVISS-----------EVG  196 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----------------~~~~l~~~gl~~~f~~i~~~~-----------~~~  196 (261)
                      .+.|+.+.++..|++.|+++.|||-++..                ++..|+..+-+.-++.+++..           .++
T Consensus        75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~g  154 (219)
T PTZ00445         75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLG  154 (219)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence            56788899999999999999999987652                355666555554455555432           246


Q ss_pred             CCCCCHHH--H--HHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          197 CEKPDPRI--F--KAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       197 ~~Kp~~~~--~--~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ..||+|..  |  +++++++|++|++++||.|+ ..++++|++.|+.++.+..+
T Consensus       155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~-~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDD-MNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             ccCCCccchHHHHHHHHHHcCCCHHHeEeecCC-HHHHHHHHHCCCEEEEcCCh
Confidence            78999999  9  99999999999999999777 89999999999999988654

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.45  E-value=3.1e-12  Score=102.83  Aligned_cols=113  Identities=15%  Similarity=0.116  Sum_probs=89.6

Q ss_pred             ceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceE------EecCCCCCCCCCH---------HHH
Q 024886          142 AWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAV------VISSEVGCEKPDP---------RIF  205 (261)
Q Consensus       142 ~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i------~~~~~~~~~Kp~~---------~~~  205 (261)
                      ...+.||+.++++.|+++|++++|+|++... +..+++.+|+.+.+..+      +..++.-.++|.|         .++
T Consensus       119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~  198 (277)
T TIGR01544       119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA  198 (277)
T ss_pred             CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence            3689999999999999999999999999987 79999999987666666      4344555567777         677


Q ss_pred             HHHHHHcC--CCCCcEEEEcCCchhhhHHHHhC-CCe-EEEECCCCCChHHHHH
Q 024886          206 KAALDQMS--VEASRTVHIGDDEKADKQGANSL-GID-CWLWGIDVKTFSDVQN  255 (261)
Q Consensus       206 ~~~~~~l~--~~~~~~l~iGD~~~~Di~~a~~~-G~~-~i~v~~~~~~~~el~~  255 (261)
                      +...+.++  .++++|+++||+ .+|+.||... ... .+-++.=.++.++..+
T Consensus       199 ~~~~~~~~~~~~~~~vI~vGDs-~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~  251 (277)
T TIGR01544       199 LRNTEYFNQLKDRSNIILLGDS-QGDLRMADGVANVEHILKIGYLNDRVDELLE  251 (277)
T ss_pred             HHHHHHhCccCCcceEEEECcC-hhhhhHhcCCCcccceEEEEecccCHHHHHH
Confidence            78888898  899999999999 8999998877 333 3445555566666444

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=99.42  E-value=1e-12  Score=98.20  Aligned_cols=109  Identities=21%  Similarity=0.289  Sum_probs=77.0

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCC-chH-HHHHHHhcCcc----------cccceEEecCCCCCCCCCHHHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNF-DTR-LRKLLKDLNVI----------DLFDAVVISSEVGCEKPDPRIFKAALD  210 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~-~~~-~~~~l~~~gl~----------~~f~~i~~~~~~~~~Kp~~~~~~~~~~  210 (261)
                      +.+||++.+.|+.|+.+|++++++|-. ..+ ++..|+.+++.          ++|+..-.    +.+ ++..-|+.+.+
T Consensus        44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI----~~g-sK~~Hf~~i~~  118 (169)
T PF12689_consen   44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEI----YPG-SKTTHFRRIHR  118 (169)
T ss_dssp             E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEE----SSS--HHHHHHHHHH
T ss_pred             EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhhe----ecC-chHHHHHHHHH
Confidence            689999999999999999999999943 344 79999999998          77776433    222 57778999999


Q ss_pred             HcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhhh
Q 024886          211 QMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       211 ~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~  258 (261)
                      ..|++.++++||.|. ..+++...+.|+.++++.+|.. ++++.+.|.
T Consensus       119 ~tgI~y~eMlFFDDe-~~N~~~v~~lGV~~v~v~~Glt-~~~~~~gL~  164 (169)
T PF12689_consen  119 KTGIPYEEMLFFDDE-SRNIEVVSKLGVTCVLVPDGLT-WDEFERGLE  164 (169)
T ss_dssp             HH---GGGEEEEES--HHHHHHHHTTT-EEEE-SSS---HHHHHHHHH
T ss_pred             hcCCChhHEEEecCc-hhcceeeEecCcEEEEeCCCCC-HHHHHHHHH
Confidence            999999999999776 8999999999999999999654 676666553

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.42  E-value=1.3e-11  Score=97.08  Aligned_cols=110  Identities=16%  Similarity=0.246  Sum_probs=84.6

Q ss_pred             eeeCccHHHHHHHHH--HCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC-----------------CCCCCC--
Q 024886          143 WHLPHGAYQSILLLK--DAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE-----------------VGCEKP--  200 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~--~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~-----------------~~~~Kp--  200 (261)
                      +++.||+.++++.+.  ..|+.++|+|++..- ++.+|+..|+...|+.|++...                 ...+-|  
T Consensus        70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~Nm  149 (234)
T PF06888_consen   70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNM  149 (234)
T ss_pred             CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCcc
Confidence            588999999999994  469999999998887 8999999999999988887521                 001111  


Q ss_pred             -CHHHHHHHHHH---cCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          201 -DPRIFKAALDQ---MSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       201 -~~~~~~~~~~~---l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                       |...++.+++.   -|+..++++||||. .+|+-++.+.+-.-++..+....+..+
T Consensus       150 CK~~il~~~~~~~~~~g~~~~rviYiGDG-~nD~Cp~~~L~~~D~v~~R~~~~l~~~  205 (234)
T PF06888_consen  150 CKGKILERLLQEQAQRGVPYDRVIYIGDG-RNDFCPALRLRPRDVVFPRKGYPLHKL  205 (234)
T ss_pred             chHHHHHHHHHHHhhcCCCcceEEEECCC-CCCcCcccccCCCCEEecCCCChHHHH
Confidence             34466777666   37888999999998 899999998887766666665544443

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=99.41  E-value=3.1e-13  Score=96.83  Aligned_cols=95  Identities=21%  Similarity=0.371  Sum_probs=77.5

Q ss_pred             HHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          152 SILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      .++.|.+.|++++|+|+..+. ++...+.+|+...|.++         +.+...|+.+++++++.++++.|+||+ .+|+
T Consensus        43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~---------~dK~~a~~~L~~~~~l~~e~~ayiGDD-~~Dl  112 (170)
T COG1778          43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI---------SDKLAAFEELLKKLNLDPEEVAYVGDD-LVDL  112 (170)
T ss_pred             HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech---------HhHHHHHHHHHHHhCCCHHHhhhhcCc-cccH
Confidence            456677889999999999887 79999999987555433         446779999999999999999999999 7999


Q ss_pred             HHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          231 QGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       231 ~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ......|+++ .+.++...+.+.++++
T Consensus       113 pvm~~vGls~-a~~dAh~~v~~~a~~V  138 (170)
T COG1778         113 PVMEKVGLSV-AVADAHPLLKQRADYV  138 (170)
T ss_pred             HHHHHcCCcc-cccccCHHHHHhhHhh
Confidence            9999999887 4556655555555554

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=99.39  E-value=1.6e-11  Score=97.68  Aligned_cols=62  Identities=24%  Similarity=0.344  Sum_probs=58.6

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      .-.+||++.+++.+.++++++|++++||||++..||..+++.|+++++|-+|+.+.+++.+.
T Consensus       220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~  281 (306)
T KOG2882|consen  220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEA  281 (306)
T ss_pred             eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhc
Confidence            33689999999999999999999999999999999999999999999999999999998765

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.39  E-value=7.6e-11  Score=92.41  Aligned_cols=97  Identities=9%  Similarity=-0.008  Sum_probs=67.1

Q ss_pred             eeCccHHHHHH-HHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecC----CCC--CCCC--CHHHHHHHHHHcC
Q 024886          144 HLPHGAYQSIL-LLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISS----EVG--CEKP--DPRIFKAALDQMS  213 (261)
Q Consensus       144 ~~~~g~~~~l~-~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~----~~~--~~Kp--~~~~~~~~~~~l~  213 (261)
                      .++||+.+.|+ .++++|++++|+||++.. ++.+.+..++... +.++++.    +.+  .+.+  ..+-...+.+.++
T Consensus        94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~  172 (210)
T TIGR01545        94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIG  172 (210)
T ss_pred             CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhC
Confidence            67999999995 788899999999999887 6888877654221 2333332    101  0111  1122444555556


Q ss_pred             CCCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          214 VEASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       214 ~~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      .+.+.+.++||| .+|+.+...+|-+.+.
T Consensus       173 ~~~~~~~aYsDS-~~D~pmL~~a~~~~~V  200 (210)
T TIGR01545       173 SPLKLYSGYSDS-KQDNPLLAFCEHRWRV  200 (210)
T ss_pred             CChhheEEecCC-cccHHHHHhCCCcEEE
Confidence            677788999999 7999999999987743

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.34  E-value=9.1e-13  Score=105.15  Aligned_cols=92  Identities=15%  Similarity=0.174  Sum_probs=65.3

Q ss_pred             EEEEeCCchH-HHHHHHhcCcccccceEE---ecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCC
Q 024886          163 VAVVSNFDTR-LRKLLKDLNVIDLFDAVV---ISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGI  238 (261)
Q Consensus       163 i~i~T~~~~~-~~~~l~~~gl~~~f~~i~---~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~  238 (261)
                      +.+.++.... +...++..+..  +....   ..+-...+.+|+..++.+++.+|++++++++|||+ .||++|++.+|+
T Consensus       118 ~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~-~NDi~m~~~ag~  194 (230)
T PRK01158        118 VALRRTVPVEEVRELLEELGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDS-ENDLEMFEVAGF  194 (230)
T ss_pred             eeecccccHHHHHHHHHHcCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCc-hhhHHHHHhcCc
Confidence            3444443333 56666666531  22111   12334456667889999999999999999999999 899999999998


Q ss_pred             eEEEECCCCCChHHHHHhhh
Q 024886          239 DCWLWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       239 ~~i~v~~~~~~~~el~~~l~  258 (261)
                      +. .++++...+++.++++.
T Consensus       195 ~v-am~Na~~~vk~~a~~v~  213 (230)
T PRK01158        195 GV-AVANADEELKEAADYVT  213 (230)
T ss_pred             eE-EecCccHHHHHhcceEe
Confidence            76 78888777777766653

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=99.33  E-value=1.4e-11  Score=92.09  Aligned_cols=95  Identities=22%  Similarity=0.421  Sum_probs=69.5

Q ss_pred             eeC-ccHHHHHHHHHHCCCeEEEEeCCc---h-----H-------HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHH
Q 024886          144 HLP-HGAYQSILLLKDAGVKVAVVSNFD---T-----R-------LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKA  207 (261)
Q Consensus       144 ~~~-~g~~~~l~~L~~~g~~i~i~T~~~---~-----~-------~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~  207 (261)
                      .++ |++.+.|+.|.+.||.|+|+||..   .     .       +..+++.+++.  +...++.......||.+.+++.
T Consensus        28 ~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~~d~~RKP~~GM~~~  105 (159)
T PF08645_consen   28 KFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPHKDPCRKPNPGMWEF  105 (159)
T ss_dssp             EEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGCSSTTSTTSSHHHHH
T ss_pred             hhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCCCCCCCCCchhHHHH
Confidence            554 589999999999999999999841   1     1       24556666664  4444444555789999999999


Q ss_pred             HHHHcCC----CCCcEEEEcCC--c--------hhhhHHHHhCCCeE
Q 024886          208 ALDQMSV----EASRTVHIGDD--E--------KADKQGANSLGIDC  240 (261)
Q Consensus       208 ~~~~l~~----~~~~~l~iGD~--~--------~~Di~~a~~~G~~~  240 (261)
                      +++.++.    +.++++||||.  +        ..|.+-|.++|++.
T Consensus       106 ~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f  152 (159)
T PF08645_consen  106 ALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF  152 (159)
T ss_dssp             HCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred             HHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence            9999974    99999999994  1        57999999999986

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=99.32  E-value=9.8e-12  Score=93.29  Aligned_cols=54  Identities=31%  Similarity=0.470  Sum_probs=50.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          193 SEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       193 ~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +..-.+||++.+|+.+++.+|++|++++||||+...|+-.|.+.||..|.|-+|
T Consensus       175 ~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTG  228 (262)
T KOG3040|consen  175 EATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTG  228 (262)
T ss_pred             eEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeecc
Confidence            344578999999999999999999999999999999999999999999999777

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=99.32  E-value=2.6e-12  Score=102.69  Aligned_cols=51  Identities=33%  Similarity=0.531  Sum_probs=46.2

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcE-EEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRT-VHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~-l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ..+||++.+|+.++++++++++++ +||||+...|+.+|+++|+.+++|.+|
T Consensus       185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence            467999999999999999999887 999999558999999999999998654

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.29  E-value=8.8e-12  Score=81.22  Aligned_cols=59  Identities=34%  Similarity=0.566  Sum_probs=54.7

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      .+||+|.+|..++++++++++++++|||++..||++|+++|+.+++|.++..+.+++..
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~   60 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEK   60 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHH
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhc
Confidence            58999999999999999999999999999789999999999999999999887777653

...

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=99.28  E-value=4.4e-11  Score=89.05  Aligned_cols=95  Identities=24%  Similarity=0.197  Sum_probs=70.6

Q ss_pred             eeCccHHHHHHHHHHCCC--eEEEEeCCc-------hH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcC
Q 024886          144 HLPHGAYQSILLLKDAGV--KVAVVSNFD-------TR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMS  213 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~--~i~i~T~~~-------~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~  213 (261)
                      .+.|.+.+.++++++.+.  ++.|+||+.       .. ++.+-+.+|+.    .+..    ...||  ..+..+.+.++
T Consensus        59 ~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h----~~kKP--~~~~~i~~~~~  128 (168)
T PF09419_consen   59 EIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRH----RAKKP--GCFREILKYFK  128 (168)
T ss_pred             cCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEe----CCCCC--ccHHHHHHHHh
Confidence            344556677777777754  599999972       23 56677778853    2211    24677  47777777776


Q ss_pred             C-----CCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          214 V-----EASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       214 ~-----~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      .     .|+++++|||.+-.|+-+|..+|+.+|++..|+.
T Consensus       129 ~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv~  168 (168)
T PF09419_consen  129 CQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGVT  168 (168)
T ss_pred             hccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCcC
Confidence            4     4999999999999999999999999999988763

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.28  E-value=5.8e-12  Score=100.16  Aligned_cols=93  Identities=12%  Similarity=0.109  Sum_probs=65.7

Q ss_pred             EEEeCCchH-HHHHHHhcCccccc-ceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEE
Q 024886          164 AVVSNFDTR-LRKLLKDLNVIDLF-DAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       164 ~i~T~~~~~-~~~~l~~~gl~~~f-~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                      .+.+....+ +..+++.++....+ ......+-...+.+|...++.+++.+|++++++++|||+ .||+.|++.+|.++ 
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~-~NDi~m~~~ag~~v-  188 (225)
T TIGR01482       111 KMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS-ENDIDLFEVPGFGV-  188 (225)
T ss_pred             EEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC-HhhHHHHHhcCceE-
Confidence            334433433 56677777643111 001122334456778889999999999999999999999 89999999999875 


Q ss_pred             EECCCCCChHHHHHhhh
Q 024886          242 LWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       242 ~v~~~~~~~~el~~~l~  258 (261)
                      .++++.+.+++.++.+.
T Consensus       189 am~Na~~~~k~~A~~vt  205 (225)
T TIGR01482       189 AVANAQPELKEWADYVT  205 (225)
T ss_pred             EcCChhHHHHHhcCeec
Confidence            78888777777776653

catalyze the same reaction as SPP.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=99.23  E-value=2.7e-10  Score=91.64  Aligned_cols=83  Identities=17%  Similarity=0.173  Sum_probs=65.8

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcCcccc-cceEEecCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLNVIDL-FDAVVISSEVGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~gl~~~-f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ..++||+.++++.|+++|++++++||.+..    ....++.+|+... ++.++..++   .++++.-.+.+.+.+++   
T Consensus       117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~---~~~K~~rr~~I~~~y~I---  190 (266)
T TIGR01533       117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD---KSSKESRRQKVQKDYEI---  190 (266)
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC---CCCcHHHHHHHHhcCCE---
Confidence            478999999999999999999999997743    2577888998754 456665542   35666788888888887   


Q ss_pred             cEEEEcCCchhhhHHH
Q 024886          218 RTVHIGDDEKADKQGA  233 (261)
Q Consensus       218 ~~l~iGD~~~~Di~~a  233 (261)
                       +++|||+ ..|+..+
T Consensus       191 -vl~vGD~-~~Df~~~  204 (266)
T TIGR01533       191 -VLLFGDN-LLDFDDF  204 (266)
T ss_pred             -EEEECCC-HHHhhhh
Confidence             8999998 7999654

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=99.22  E-value=1.3e-10  Score=94.92  Aligned_cols=60  Identities=13%  Similarity=0.212  Sum_probs=51.7

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhhh
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~  258 (261)
                      .+-.|..+++.+++.+|++++++++|||+ .||++|.+.+|.+. .++++.+.+++.++++.
T Consensus       193 ~gvsKg~al~~l~~~~gi~~~~v~afGD~-~NDi~Ml~~ag~~v-Am~NA~~~vK~~A~~vt  252 (270)
T PRK10513        193 KRVNKGTGVKSLAEHLGIKPEEVMAIGDQ-ENDIAMIEYAGVGV-AMGNAIPSVKEVAQFVT  252 (270)
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCc-hhhHHHHHhCCceE-EecCccHHHHHhcCeec
Confidence            34556678999999999999999999999 89999999999765 88899888888877764

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.19  E-value=4.5e-11  Score=94.37  Aligned_cols=91  Identities=9%  Similarity=0.089  Sum_probs=65.2

Q ss_pred             EEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEE
Q 024886          165 VVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLW  243 (261)
Q Consensus       165 i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v  243 (261)
                      +++..... +...++..++...... ...+-...+..+..+++.+++.+|++++++++|||+ .||++|++.+|+.. .+
T Consensus       112 ~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs-~ND~~ml~~ag~~v-am  188 (215)
T TIGR01487       112 MREGKDVDEVREIIKERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDS-ENDIDLFRVVGFKV-AV  188 (215)
T ss_pred             ecCCccHHHHHHHHHhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCC-HHHHHHHHhCCCeE-Ec
Confidence            34443433 5667777665433221 111223345567779999999999999999999999 89999999999776 78


Q ss_pred             CCCCCChHHHHHhhh
Q 024886          244 GIDVKTFSDVQNRIL  258 (261)
Q Consensus       244 ~~~~~~~~el~~~l~  258 (261)
                      .++.+.+++.++++.
T Consensus       189 ~na~~~~k~~A~~v~  203 (215)
T TIGR01487       189 ANADDQLKEIADYVT  203 (215)
T ss_pred             CCccHHHHHhCCEEc
Confidence            888777777777664

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.19  E-value=2.3e-10  Score=93.66  Aligned_cols=54  Identities=11%  Similarity=0.050  Sum_probs=46.5

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChH
Q 024886          195 VGCEKPDPRIFKAALDQMSVEA-SRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFS  251 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~-~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~  251 (261)
                      .+.+ .+...++.+++.+|+++ +++++|||+ .||++|++.+|.++ .++++.+..+
T Consensus       186 ~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs-~NDi~m~~~ag~~v-am~NA~~~~k  240 (273)
T PRK00192        186 LGGG-DKGKAVRWLKELYRRQDGVETIALGDS-PNDLPMLEAADIAV-VVPGPDGPNP  240 (273)
T ss_pred             eCCC-CHHHHHHHHHHHHhccCCceEEEEcCC-hhhHHHHHhCCeeE-EeCCCCCCCc
Confidence            3344 66779999999999999 999999999 89999999999776 7888877666

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.19  E-value=8.3e-10  Score=82.18  Aligned_cols=162  Identities=15%  Similarity=0.197  Sum_probs=98.5

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchH
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDD  128 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (261)
                      +.++|+||+|.|++..+     .+.+++...|+.-...++..   ..+           +...+|...+..+..-..  .
T Consensus        15 ~~~aVcFDvDSTvi~eE-----gIdelA~~~G~~~~Va~~T~---rAM-----------ng~~~F~eaL~~Rl~llq--p   73 (227)
T KOG1615|consen   15 SADAVCFDVDSTVIQEE-----GIDELAAYCGVGEAVAEVTR---RAM-----------NGEADFQEALAARLSLLQ--P   73 (227)
T ss_pred             hcCeEEEecCcchhHHh-----hHHHHHHHhCchHHHHHHHH---HHh-----------CCCCcHHHHHHHHHHHhc--c
Confidence            46899999999999753     35555555555411111111   111           122333333333332211  1


Q ss_pred             HHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc--cc--------ceEEec-CCC-
Q 024886          129 YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID--LF--------DAVVIS-SEV-  195 (261)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~--~f--------~~i~~~-~~~-  195 (261)
                      ....+.... ...++++.||+++++..|++.|..++++|++... +..+-..+|++.  .+        ++-+.+ +.. 
T Consensus        74 ~~~qv~~~v-~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~  152 (227)
T KOG1615|consen   74 LQVQVEQFV-IKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE  152 (227)
T ss_pred             cHHHHHHHH-hcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC
Confidence            122222222 2334688999999999999999999999999988 688888898863  22        122222 111 


Q ss_pred             --CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHh
Q 024886          196 --GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANS  235 (261)
Q Consensus       196 --~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~  235 (261)
                        .-+--+++.+..+.+  |.+-..++||||. .+|+++..-
T Consensus       153 ptsdsggKa~~i~~lrk--~~~~~~~~mvGDG-atDlea~~p  191 (227)
T KOG1615|consen  153 PTSDSGGKAEVIALLRK--NYNYKTIVMVGDG-ATDLEAMPP  191 (227)
T ss_pred             ccccCCccHHHHHHHHh--CCChheeEEecCC-ccccccCCc
Confidence              112224457777777  7778999999998 899987665

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=99.18  E-value=3.4e-10  Score=87.65  Aligned_cols=84  Identities=24%  Similarity=0.294  Sum_probs=60.7

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCC--C-------CCC----CCHHHHHHH---H
Q 024886          147 HGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEV--G-------CEK----PDPRIFKAA---L  209 (261)
Q Consensus       147 ~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~--~-------~~K----p~~~~~~~~---~  209 (261)
                      |++.++++.++++|++++|+|+++.. ++.+++.+|+....  ++++...  +       ...    .|...++.+   .
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~  169 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRD  169 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHh
Confidence            45559999999999999999999887 78999999986421  2221110  0       000    145566666   4


Q ss_pred             HHcCCCCCcEEEEcCCchhhhHHHH
Q 024886          210 DQMSVEASRTVHIGDDEKADKQGAN  234 (261)
Q Consensus       210 ~~l~~~~~~~l~iGD~~~~Di~~a~  234 (261)
                      .. +.+...+++|||+ .+|+.+++
T Consensus       170 ~~-~~~~~~~~~iGDs-~~D~~~lr  192 (192)
T PF12710_consen  170 EE-DIDPDRVIAIGDS-INDLPMLR  192 (192)
T ss_dssp             HH-THTCCEEEEEESS-GGGHHHHH
T ss_pred             hc-CCCCCeEEEEECC-HHHHHHhC
Confidence            44 8889999999999 89999875

>TIGR01684 viral_ppase viral phosphatase

Probab=99.16  E-value=1.5e-10  Score=92.86  Aligned_cols=57  Identities=18%  Similarity=0.212  Sum_probs=52.4

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          147 HGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       147 ~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      ||+.++|++|+++|++++|+|++... +...++.+|+..+|+.++++++....||.++
T Consensus       149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e  206 (301)
T TIGR01684       149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMS  206 (301)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCcc
Confidence            88999999999999999999998877 7899999999999999999998888888774

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.12  E-value=2.6e-09  Score=81.15  Aligned_cols=108  Identities=16%  Similarity=0.164  Sum_probs=78.0

Q ss_pred             eeeCccHHHHHHHHHHCCC-eEEEEeCCchH-HHHHHHhcCcccccceEEecCC----CC-----------CC--CC---
Q 024886          143 WHLPHGAYQSILLLKDAGV-KVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE----VG-----------CE--KP---  200 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~-~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~----~~-----------~~--Kp---  200 (261)
                      +++.||+.++++.+++.|. .+.|+|.+..- ++.+|+.+|+.+.|..|++...    -|           .+  -|   
T Consensus        83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNm  162 (256)
T KOG3120|consen   83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNM  162 (256)
T ss_pred             CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhh
Confidence            5889999999999999985 99999998877 8999999999999988876531    00           00  11   


Q ss_pred             -CHHHHHHHHHHc---CCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChH
Q 024886          201 -DPRIFKAALDQM---SVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFS  251 (261)
Q Consensus       201 -~~~~~~~~~~~l---~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~  251 (261)
                       +...++.+....   |+.-++.+|+||. .+|+-+.....-.-+.+.+....+.
T Consensus       163 CKg~Vl~~~~~s~~~~gv~yer~iYvGDG-~nD~CP~l~Lr~~D~ampRkgfpl~  216 (256)
T KOG3120|consen  163 CKGLVLDELVASQLKDGVRYERLIYVGDG-ANDFCPVLRLRACDVAMPRKGFPLW  216 (256)
T ss_pred             hhhHHHHHHHHHHhhcCCceeeEEEEcCC-CCCcCcchhcccCceecccCCCchH
Confidence             112333333332   7888999999998 8999887776555556665544333

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=99.11  E-value=1.3e-10  Score=97.04  Aligned_cols=54  Identities=22%  Similarity=0.218  Sum_probs=46.8

Q ss_pred             CCCCCCHHHHHHHHHHc--------CC-----CCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCC
Q 024886          196 GCEKPDPRIFKAALDQM--------SV-----EASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKT  249 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l--------~~-----~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~  249 (261)
                      ..+||++.+|+.+++.+        ++     ++++++||||++..||.+|.++||.+++|.+|..+
T Consensus       230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~  296 (321)
T TIGR01456       230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYN  296 (321)
T ss_pred             EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccC
Confidence            46999999999988887        43     45799999999889999999999999999887443

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=99.07  E-value=2.5e-10  Score=93.06  Aligned_cols=61  Identities=8%  Similarity=0.156  Sum_probs=52.9

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ...+..|..+.+.+++.+|++++++++|||+ .||++|.+.+|.++ .++++.+.++++++.+
T Consensus       184 ~~~g~~K~~al~~l~~~lgi~~~~v~afGD~-~ND~~Ml~~ag~gv-am~Na~~~~k~~A~~v  244 (264)
T COG0561         184 TPKGVSKGYALQRLAKLLGIKLEEVIAFGDS-TNDIEMLEVAGLGV-AMGNADEELKELADYV  244 (264)
T ss_pred             ecCCCchHHHHHHHHHHhCCCHHHeEEeCCc-cccHHHHHhcCeee-eccCCCHHHHhhCCcc
Confidence            4456677889999999999999999999999 89999999999766 8888888888877754

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=99.06  E-value=9.8e-09  Score=82.91  Aligned_cols=91  Identities=14%  Similarity=0.116  Sum_probs=64.2

Q ss_pred             CCeEEEEeCCch--H----HHHHHHhcCcccccceEEec----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhh
Q 024886          160 GVKVAVVSNFDT--R----LRKLLKDLNVIDLFDAVVIS----SEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKAD  229 (261)
Q Consensus       160 g~~i~i~T~~~~--~----~~~~l~~~gl~~~f~~i~~~----~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~D  229 (261)
                      -+++.++.....  .    +...+...++.  +..++++    +..+.+.++..+++.+++.+|++++++++|||+ .||
T Consensus       119 ~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~-~ND  195 (249)
T TIGR01485       119 PHKVSFFLDPEAAPEVIKQLTEMLKETGLD--VKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDS-GND  195 (249)
T ss_pred             CeeEEEEechhhhhHHHHHHHHHHHhcCCC--EEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECC-hhH
Confidence            366666654322  1    23334444432  2333333    345577889999999999999999999999999 899


Q ss_pred             hHHHHhCCCeEEEECCCCCChHHH
Q 024886          230 KQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       230 i~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      ++|++.+|..+++|+++...+++.
T Consensus       196 ~~ml~~~~~~~va~~na~~~~k~~  219 (249)
T TIGR01485       196 IELFEIGSVRGVIVSNAQEELLQW  219 (249)
T ss_pred             HHHHHccCCcEEEECCCHHHHHHH
Confidence            999999777788998876655543

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=99.05  E-value=4.9e-09  Score=85.79  Aligned_cols=59  Identities=10%  Similarity=0.142  Sum_probs=50.3

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      ...+-.|..+++.+++.+|++++++++|||+ .||++|.+.+|.+. .++++.+.+++.++
T Consensus       183 ~~~g~sKg~al~~l~~~~gi~~~~v~afGD~-~NDi~Ml~~ag~~v-Am~Na~~~vK~~A~  241 (272)
T PRK15126        183 LPVGCNKGAALAVLSQHLGLSLADCMAFGDA-MNDREMLGSVGRGF-IMGNAMPQLRAELP  241 (272)
T ss_pred             ecCCCChHHHHHHHHHHhCCCHHHeEEecCC-HHHHHHHHHcCCce-eccCChHHHHHhCC
Confidence            4455667789999999999999999999999 89999999999755 88888777766654

>PLN02887 hydrolase family protein

Probab=99.04  E-value=4.5e-09  Score=93.53  Aligned_cols=62  Identities=16%  Similarity=0.134  Sum_probs=54.3

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhhh
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~  258 (261)
                      +..+-.|..+++.+++.+|++++++++|||+ .||++|.+.+|.++ .++++...+++.+++|.
T Consensus       502 ~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs-~NDIeMLe~AG~gV-AMgNA~eeVK~~Ad~VT  563 (580)
T PLN02887        502 VPPGTSKGNGVKMLLNHLGVSPDEIMAIGDG-ENDIEMLQLASLGV-ALSNGAEKTKAVADVIG  563 (580)
T ss_pred             ecCCCCHHHHHHHHHHHcCCCHHHEEEEecc-hhhHHHHHHCCCEE-EeCCCCHHHHHhCCEEe
Confidence            4456667789999999999999999999999 89999999999765 89999888888887764

>PRK10976 putative hydrolase; Provisional

Probab=99.03  E-value=1.2e-09  Score=89.03  Aligned_cols=59  Identities=14%  Similarity=0.245  Sum_probs=51.1

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      ...+-.|..+++.+++.+|++++++++|||+ .||++|.+.+|.+. .++++.+.+++.++
T Consensus       185 ~~~gvsKg~al~~l~~~lgi~~~~viafGD~-~NDi~Ml~~ag~~v-Am~NA~~~vK~~A~  243 (266)
T PRK10976        185 MAGGVSKGHALEAVAKKLGYSLKDCIAFGDG-MNDAEMLSMAGKGC-IMGNAHQRLKDLLP  243 (266)
T ss_pred             EcCCCChHHHHHHHHHHcCCCHHHeEEEcCC-cccHHHHHHcCCCe-eecCCcHHHHHhCC
Confidence            4455567789999999999999999999999 89999999999865 88898887777765

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=98.97  E-value=6.3e-09  Score=82.50  Aligned_cols=43  Identities=9%  Similarity=0.011  Sum_probs=37.9

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEE
Q 024886          198 EKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                      +-.++.+++.+++.+|++++++++|||+ .||++|.+.+|.+++
T Consensus       177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~-~NDi~ml~~ag~~va  219 (221)
T TIGR02463       177 SSSKGKAANWLKATYNQPDVKTLGLGDG-PNDLPLLEVADYAVV  219 (221)
T ss_pred             CCCHHHHHHHHHHHhCCCCCcEEEECCC-HHHHHHHHhCCceEE
Confidence            3345558999999999999999999999 899999999998764

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.97  E-value=1e-09  Score=82.48  Aligned_cols=97  Identities=7%  Similarity=-0.011  Sum_probs=83.5

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc-ccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID-LFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV  220 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  220 (261)
                      ....||+.++|+.|.+. +.++|+|++... ++.+++.++... +|+.+++.+.....+|+   |...++.+|.++++++
T Consensus        41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~vI  116 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKVI  116 (162)
T ss_pred             EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhhEE
Confidence            47889999999999988 999999999987 799999998765 88988888776555655   6677888999999999


Q ss_pred             EEcCCchhhhHHHHhCCCeEEEEC
Q 024886          221 HIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       221 ~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      +|||+ +.++.++..+|+....+.
T Consensus       117 iVDD~-~~~~~~~~~NgI~i~~f~  139 (162)
T TIGR02251       117 IIDNS-PYSYSLQPDNAIPIKSWF  139 (162)
T ss_pred             EEeCC-hhhhccCccCEeecCCCC
Confidence            99998 899999999999887554

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.94  E-value=1.4e-08  Score=69.96  Aligned_cols=83  Identities=17%  Similarity=0.207  Sum_probs=58.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCch----HHHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDT----RLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~----~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .++||+.++++.|+++|.+++++||++.    .....|+.+|+..-.+.++++...        .-.++.+..+  ...+
T Consensus        14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~~--------~~~~l~~~~~--~~~v   83 (101)
T PF13344_consen   14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGMA--------AAEYLKEHKG--GKKV   83 (101)
T ss_dssp             EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHHH--------HHHHHHHHTT--SSEE
T ss_pred             CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHHH--------HHHHHHhcCC--CCEE
Confidence            7789999999999999999999999762    246777889987666777765431        3344444333  5778


Q ss_pred             EEEcCCchhhhHHHHhCCC
Q 024886          220 VHIGDDEKADKQGANSLGI  238 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~  238 (261)
                      +++|-  ....+.++.+|+
T Consensus        84 ~vlG~--~~l~~~l~~~G~  100 (101)
T PF13344_consen   84 YVLGS--DGLREELREAGF  100 (101)
T ss_dssp             EEES---HHHHHHHHHTTE
T ss_pred             EEEcC--HHHHHHHHHcCC
Confidence            88877  477778888886

...

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=98.93  E-value=5.9e-09  Score=84.56  Aligned_cols=61  Identities=8%  Similarity=0.162  Sum_probs=49.8

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ...+-.|...++.+++.+|++++++++|||+ .||++|++.+|++. .++++...+++.++++
T Consensus       183 ~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~-~nD~~m~~~~~~~~-a~~na~~~~k~~a~~~  243 (256)
T TIGR00099       183 TAKGVSKGSALQSLAEALGISLEDVIAFGDG-MNDIEMLEAAGYGV-AMGNADEELKALADYV  243 (256)
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEeCCc-HHhHHHHHhCCcee-EecCchHHHHHhCCEE
Confidence            4456667889999999999999999999999 89999999999875 5666666555555544

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=98.93  E-value=6.6e-08  Score=77.44  Aligned_cols=91  Identities=9%  Similarity=0.131  Sum_probs=65.1

Q ss_pred             CeEEEEeCCc--hH---HHHHHHhcCcccccceEEec----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhH
Q 024886          161 VKVAVVSNFD--TR---LRKLLKDLNVIDLFDAVVIS----SEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQ  231 (261)
Q Consensus       161 ~~i~i~T~~~--~~---~~~~l~~~gl~~~f~~i~~~----~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~  231 (261)
                      +++.+.....  ..   +...++..+..  +..+++.    +-.+.+++|..+++.+++++|++++++++|||+ .||+.
T Consensus       113 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~-~nD~~  189 (236)
T TIGR02471       113 FKISYLLDPEGEPILPQIRQRLRQQSQA--AKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDS-GNDEE  189 (236)
T ss_pred             eeEEEEECcccchHHHHHHHHHHhccCC--EEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCC-ccHHH
Confidence            5666655432  11   23444444432  2333443    345567888899999999999999999999999 89999


Q ss_pred             HHHhCCCeEEEECCCCCChHHHHH
Q 024886          232 GANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       232 ~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      |++.+|.+. .|++..+.+++.++
T Consensus       190 ml~~~~~~i-av~na~~~~k~~a~  212 (236)
T TIGR02471       190 MLRGLTLGV-VVGNHDPELEGLRH  212 (236)
T ss_pred             HHcCCCcEE-EEcCCcHHHHHhhc
Confidence            999999666 78888777777766

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=98.90  E-value=1.5e-09  Score=84.09  Aligned_cols=110  Identities=19%  Similarity=0.398  Sum_probs=65.4

Q ss_pred             HHHHHHHHHhh---CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH--------HHHHHHhc-CcccccceEEecCCCC
Q 024886          129 YFEEVYEYYAK---GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR--------LRKLLKDL-NVIDLFDAVVISSEVG  196 (261)
Q Consensus       129 ~~~~~~~~~~~---~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~--------~~~~l~~~-gl~~~f~~i~~~~~~~  196 (261)
                      ..+.+.+.+..   ....++.||+.++|+.|.+.|+.++++|..+..        -..++++. |... ++.++.+.+  
T Consensus        55 ~~~~~~~~~~~~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~-~~~~~~~~~--  131 (191)
T PF06941_consen   55 FYEKLWRFYEEPGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIP-YDNLIFTGD--  131 (191)
T ss_dssp             HHHHHHHHHTSTTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHH-HCCEEEESS--
T ss_pred             HHHHHHHHHhChhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCc-hheEEEecC--
Confidence            33444444433   234689999999999999999888888764421        14566654 3222 233443322  


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC----------CCChHHHHHhhh
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID----------VKTFSDVQNRIL  258 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~----------~~~~~el~~~l~  258 (261)
                        |.          .++.+    ++|.|+ +.++..+...|+++++++.+          +.+++|+.++|.
T Consensus       132 --K~----------~v~~D----vlIDD~-~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~i~  186 (191)
T PF06941_consen  132 --KT----------LVGGD----VLIDDR-PHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDLIL  186 (191)
T ss_dssp             --GG----------GC--S----EEEESS-SHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHHHH
T ss_pred             --CC----------eEecc----EEecCC-hHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHHHH
Confidence              21          12222    789887 79999999999999988766          667888877774

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=98.89  E-value=1.1e-07  Score=70.33  Aligned_cols=89  Identities=15%  Similarity=0.195  Sum_probs=65.5

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccc-------cc----------eEEecC--CCCCCCCCH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDL-------FD----------AVVISS--EVGCEKPDP  202 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~-------f~----------~i~~~~--~~~~~Kp~~  202 (261)
                      +.+.||.++++++.++++.+++|+|++-.. +..+++.++-.+.       ++          .+...+  ..|..||. 
T Consensus        72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~-  150 (220)
T COG4359          72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS-  150 (220)
T ss_pred             cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch-
Confidence            488999999999999999999999998766 7888887752111       11          111112  24455655 


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGI  238 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~  238 (261)
                           .++.+.-+++.++|+||+ ..|+.+|+..-.
T Consensus       151 -----vI~~l~e~~e~~fy~GDs-vsDlsaaklsDl  180 (220)
T COG4359         151 -----VIHELSEPNESIFYCGDS-VSDLSAAKLSDL  180 (220)
T ss_pred             -----hHHHhhcCCceEEEecCC-cccccHhhhhhh
Confidence                 566666678889999999 899999987654

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.88  E-value=1.8e-08  Score=81.11  Aligned_cols=48  Identities=21%  Similarity=0.266  Sum_probs=43.9

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC
Q 024886          147 HGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE  194 (261)
Q Consensus       147 ~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~  194 (261)
                      |++.++|++|++.|++++|+||++.. +...++.+|+..+|+.++++++
T Consensus       151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~  199 (303)
T PHA03398        151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR  199 (303)
T ss_pred             hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence            78999999999999999999998776 7899999999999998888764

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=98.87  E-value=6e-09  Score=83.89  Aligned_cols=58  Identities=14%  Similarity=0.202  Sum_probs=48.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          198 EKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +-.+..+++.+++.+|++++++++|||+ .||++|.+.+|.+. .++++.+.+++.++.+
T Consensus       184 ~vsK~~ai~~l~~~~~i~~~~~~~~GD~-~ND~~Ml~~~~~~~-am~na~~~~k~~a~~i  241 (254)
T PF08282_consen  184 GVSKGSAIKYLLEYLGISPEDIIAFGDS-ENDIEMLELAGYSV-AMGNATPELKKAADYI  241 (254)
T ss_dssp             TSSHHHHHHHHHHHHTTSGGGEEEEESS-GGGHHHHHHSSEEE-EETTS-HHHHHHSSEE
T ss_pred             CCCHHHHHHHHhhhcccccceeEEeecc-cccHhHHhhcCeEE-EEcCCCHHHHHhCCEE
Confidence            3445567899999999999999999999 89999999999665 8888877777776655

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.83  E-value=7.6e-09  Score=71.99  Aligned_cols=110  Identities=17%  Similarity=0.260  Sum_probs=75.2

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch-HHHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHc------CCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT-RLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQM------SVE  215 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~-~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l------~~~  215 (261)
                      +.++|.+++++++++++|+-++.+|=+.. ..-+.|+.+++..||+.++.-..  ..|  ..++.++++++      .++
T Consensus        40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePh--P~K--~~ML~~llr~i~~er~~~ik  115 (164)
T COG4996          40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPH--PYK--FLMLSQLLREINTERNQKIK  115 (164)
T ss_pred             EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCC--Chh--HHHHHHHHHHHHHhhccccC
Confidence            68999999999999999999999995454 47889999999999999886332  222  23666666665      478


Q ss_pred             CCcEEEEcCCchhhhHHHHhC-C-CeEEEECCCCCChHHHHHhh
Q 024886          216 ASRTVHIGDDEKADKQGANSL-G-IDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       216 ~~~~l~iGD~~~~Di~~a~~~-G-~~~i~v~~~~~~~~el~~~l  257 (261)
                      |.+++|+.|. .--+.-.... | ..++-..-.+....++...+
T Consensus       116 P~~Ivy~DDR-~iH~~~Iwe~~G~V~~~~~~~Di~c~~ei~slL  158 (164)
T COG4996         116 PSEIVYLDDR-RIHFGNIWEYLGNVKCLEMWKDISCYSEIFSLL  158 (164)
T ss_pred             cceEEEEecc-cccHHHHHHhcCCeeeeEeecchHHHHHHHHHH
Confidence            9999999664 5555444432 3 23332222334444444443

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.82  E-value=1.2e-08  Score=82.03  Aligned_cols=89  Identities=20%  Similarity=0.211  Sum_probs=73.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HH--HHHHhcCccc-ccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LR--KLLKDLNVID-LFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~--~~l~~~gl~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .++||+.++|+.|+++|++++++||+.+. ..  ..++.+|+.. +|+.++++.....     ..+..++++++++++++
T Consensus        24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~~~   98 (242)
T TIGR01459        24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNGII   98 (242)
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCceE
Confidence            78999999999999999999999997765 33  7889999987 8999998875432     36667778889999999


Q ss_pred             EEEcCCchhhhHHHHhCCC
Q 024886          220 VHIGDDEKADKQGANSLGI  238 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~  238 (261)
                      ++|||+ ..|++.....|.
T Consensus        99 ~~vGd~-~~d~~~~~~~~~  116 (242)
T TIGR01459        99 YLLGHL-ENDIINLMQCYT  116 (242)
T ss_pred             EEeCCc-ccchhhhcCCCc
Confidence            999998 788877766554

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.81  E-value=4.9e-08  Score=79.83  Aligned_cols=53  Identities=8%  Similarity=-0.007  Sum_probs=44.6

Q ss_pred             CCCCCCCCCHHHHHHHHHHcCC---CCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          193 SEVGCEKPDPRIFKAALDQMSV---EASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       193 ~~~~~~Kp~~~~~~~~~~~l~~---~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +-...+-.|..+++.+++.+|+   ++++++.|||+ .||++|.+.+|.++ .+++..
T Consensus       180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs-~NDi~Ml~~ag~gv-AM~~~~  235 (271)
T PRK03669        180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDG-PNDAPLLDVMDYAV-VVKGLN  235 (271)
T ss_pred             EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCC-HHHHHHHHhCCEEE-EecCCC
Confidence            3344566677899999999999   99999999999 89999999999765 666554

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.72  E-value=3.5e-08  Score=88.67  Aligned_cols=90  Identities=16%  Similarity=0.265  Sum_probs=70.8

Q ss_pred             eeCccHHHHHHHHHHCC-CeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          144 HLPHGAYQSILLLKDAG-VKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g-~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      +++||+.++++.|++.| ++++++||.+.. ...+++.+|+.++|..+.       +++++.    ++++++..+++++|
T Consensus       384 ~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~-------p~~K~~----~v~~l~~~~~~v~~  452 (556)
T TIGR01525       384 QLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL-------PEDKLA----IVKELQEEGGVVAM  452 (556)
T ss_pred             cchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC-------HHHHHH----HHHHHHHcCCEEEE
Confidence            57899999999999999 999999998877 799999999977775431       123333    44444446789999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |||+ .+|+.+++++|+.. .++++
T Consensus       453 vGDg-~nD~~al~~A~vgi-a~g~~  475 (556)
T TIGR01525       453 VGDG-INDAPALAAADVGI-AMGAG  475 (556)
T ss_pred             EECC-hhHHHHHhhCCEeE-EeCCC
Confidence            9999 89999999999654 55543

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.70  E-value=3.5e-08  Score=88.16  Aligned_cols=88  Identities=14%  Similarity=0.232  Sum_probs=71.1

Q ss_pred             eeCccHHHHHHHHHHCCC-eEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          144 HLPHGAYQSILLLKDAGV-KVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~-~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      +++||+.++++.|++.|+ +++++||.+.. ...+++.+|+.++|..+.       +.++    ..++++++..+++++|
T Consensus       362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~-------p~~K----~~~i~~l~~~~~~v~~  430 (536)
T TIGR01512       362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL-------PEDK----LEIVKELREKYGPVAM  430 (536)
T ss_pred             cchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC-------cHHH----HHHHHHHHhcCCEEEE
Confidence            578999999999999999 99999998877 799999999987775432       1223    3355556666789999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEEC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      |||+ .+|+.+++.+|+. +.++
T Consensus       431 vGDg-~nD~~al~~A~vg-ia~g  451 (536)
T TIGR01512       431 VGDG-INDAPALAAADVG-IAMG  451 (536)
T ss_pred             EeCC-HHHHHHHHhCCEE-EEeC
Confidence            9999 8999999999974 4565

.

>smart00775 LNS2 LNS2 domain

Probab=98.60  E-value=7.4e-07  Score=66.53  Aligned_cols=93  Identities=14%  Similarity=0.178  Sum_probs=60.3

Q ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCchH-H---HHHHHhc---C--cccccceEEecCCC---------CCCCC---CHH
Q 024886          145 LPHGAYQSILLLKDAGVKVAVVSNFDTR-L---RKLLKDL---N--VIDLFDAVVISSEV---------GCEKP---DPR  203 (261)
Q Consensus       145 ~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~---~~~l~~~---g--l~~~f~~i~~~~~~---------~~~Kp---~~~  203 (261)
                      ..|++.++++.++++|+++.++|+.+.. .   ..+++.+   |  +.  ...++++...         -..+|   +.+
T Consensus        28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp--~g~li~~~g~~~~~~~~e~i~~~~~~~K~~  105 (157)
T smart00775       28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLP--HGPVLLSPDRLFAALHREVISKKPEVFKIA  105 (157)
T ss_pred             CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC--CceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence            3588999999999999999999998855 3   4677662   2  32  1344444331         12333   334


Q ss_pred             HHHHHHHHcCCCCCcEE-EEcCCchhhhHHHHhCCCeE
Q 024886          204 IFKAALDQMSVEASRTV-HIGDDEKADKQGANSLGIDC  240 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l-~iGD~~~~Di~~a~~~G~~~  240 (261)
                      ..+.+.+.+.-.--..+ .+|+. .+|+++=+++|+..
T Consensus       106 ~l~~i~~~~~~~~~~f~~~~gn~-~~D~~~y~~~gi~~  142 (157)
T smart00775      106 CLRDIKSLFPPQGNPFYAGFGNR-ITDVISYSAVGIPP  142 (157)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCC-chhHHHHHHcCCCh
Confidence            55566665542223344 47765 89999999999974

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>TIGR01675 plant-AP plant acid phosphatase

Probab=98.59  E-value=1.4e-06  Score=68.39  Aligned_cols=97  Identities=13%  Similarity=0.107  Sum_probs=64.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchHH----HHHHHhcCcccccceEEecCCCCCCCCC----HHHHHHHHH-HcC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTRL----RKLLKDLNVIDLFDAVVISSEVGCEKPD----PRIFKAALD-QMS  213 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~----~~~l~~~gl~~~f~~i~~~~~~~~~Kp~----~~~~~~~~~-~l~  213 (261)
                      .++.|++.++++.|+++|++|+++|+.+...    ...|...|+..+ +.++--......|+.    .+....+.+ .+.
T Consensus       119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYr  197 (229)
T TIGR01675       119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYR  197 (229)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCce
Confidence            4889999999999999999999999988542    466778887644 656554322223332    222323332 233


Q ss_pred             CCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          214 VEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       214 ~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |    +..|||+ .+|+... .+|.++.-.+++
T Consensus       198 I----v~~iGDq-~sDl~G~-~~~~RtFKLPNP  224 (229)
T TIGR01675       198 I----WGNIGDQ-WSDLLGS-PPGRRTFKLPNP  224 (229)
T ss_pred             E----EEEECCC-hHHhcCC-CccCceeeCCCC
Confidence            3    5789999 6999654 466677666665

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=98.59  E-value=4.9e-07  Score=73.33  Aligned_cols=52  Identities=13%  Similarity=0.080  Sum_probs=44.3

Q ss_pred             CCCCCCCHHHHHHHHHHcCCC--CCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          195 VGCEKPDPRIFKAALDQMSVE--ASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~--~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      .+.+-.+...++.+++.+|++  ++++++|||+ .||+.|.+.+|.++ .++++.+
T Consensus       171 ~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~-~ND~~Ml~~ag~~v-am~Na~~  224 (256)
T TIGR01486       171 LGAGSDKGKAANALKQFYNQPGGAIKVVGLGDS-PNDLPLLEVVDLAV-VVPGPNG  224 (256)
T ss_pred             ecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCC-HhhHHHHHHCCEEE-EeCCCCC
Confidence            344566777899999999999  9999999999 89999999999666 7777763

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.58  E-value=7.7e-08  Score=86.40  Aligned_cols=89  Identities=13%  Similarity=0.231  Sum_probs=68.7

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      +++||+.++++.|++.|++++++|+.... .+.+.+.+|++ +|     ++..  ++++.+.+    ++++.++++++||
T Consensus       405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~-----~~~~--p~~K~~~v----~~l~~~~~~v~~V  472 (562)
T TIGR01511       405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR-----AEVL--PDDKAALI----KELQEKGRVVAMV  472 (562)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE-----ccCC--hHHHHHHH----HHHHHcCCEEEEE
Confidence            56899999999999999999999998877 79999999984 22     2211  23333344    4444467899999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCC
Q 024886          223 GDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ||+ .+|+.+++.+|+. +.++.+
T Consensus       473 GDg-~nD~~al~~A~vg-ia~g~g  494 (562)
T TIGR01511       473 GDG-INDAPALAQADVG-IAIGAG  494 (562)
T ss_pred             eCC-CccHHHHhhCCEE-EEeCCc
Confidence            999 8999999999985 466655

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.55  E-value=2.2e-07  Score=87.39  Aligned_cols=90  Identities=13%  Similarity=0.232  Sum_probs=73.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      +++||+.+.++.|++.|++++++|+.... .+.+.+.+|+.++|..+.           |+-...++++++..++++++|
T Consensus       650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~-----------p~~K~~~i~~l~~~~~~v~~v  718 (834)
T PRK10671        650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVL-----------PDGKAEAIKRLQSQGRQVAMV  718 (834)
T ss_pred             cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCC-----------HHHHHHHHHHHhhcCCEEEEE
Confidence            46899999999999999999999998777 688999999976554321           223445777777788999999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCC
Q 024886          223 GDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ||+ .||+.+++.+|+ .+.++++
T Consensus       719 GDg-~nD~~al~~Agv-gia~g~g  740 (834)
T PRK10671        719 GDG-INDAPALAQADV-GIAMGGG  740 (834)
T ss_pred             eCC-HHHHHHHHhCCe-eEEecCC
Confidence            999 899999999999 4467766

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=98.52  E-value=4.4e-06  Score=64.25  Aligned_cols=101  Identities=15%  Similarity=0.138  Sum_probs=78.4

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHh-c---CcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKD-L---NVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~-~---gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      ...++++...++..+..|.+++|.|.+...+++.+=. .   .+..++++.+-.. + ..|-....|..+.+.+|.++.+
T Consensus       122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~-i-G~K~e~~sy~~I~~~Ig~s~~e  199 (254)
T KOG2630|consen  122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTT-I-GLKVESQSYKKIGHLIGKSPRE  199 (254)
T ss_pred             ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhcc-c-cceehhHHHHHHHHHhCCChhh
Confidence            4789999999999999999999999988775444332 2   2233333333221 2 2466677899999999999999


Q ss_pred             EEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          219 TVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +++.-|. .....+|+.+|+.+.++.++
T Consensus       200 iLfLTd~-~~Ea~aa~~aGl~a~l~~rP  226 (254)
T KOG2630|consen  200 ILFLTDV-PREAAAARKAGLQAGLVSRP  226 (254)
T ss_pred             eEEeccC-hHHHHHHHhcccceeeeecC
Confidence            9999998 89999999999999887776

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=98.51  E-value=1.9e-06  Score=68.84  Aligned_cols=101  Identities=14%  Similarity=0.101  Sum_probs=64.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchHH----HHHHHhcCcccccceEEecCCCCCCCCCHHHHH-----HHHH-Hc
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTRL----RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFK-----AALD-QM  212 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~----~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~-----~~~~-~l  212 (261)
                      .++.|++.++.+.++++|++|+++|+.+...    ...|++.|+..+ +.++--......+.+...|+     ++.+ .+
T Consensus       144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY  222 (275)
T TIGR01680       144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGY  222 (275)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCc
Confidence            5889999999999999999999999987542    456777787643 55554432111222222222     2222 23


Q ss_pred             CCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCC
Q 024886          213 SVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKT  249 (261)
Q Consensus       213 ~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~  249 (261)
                      .|    +..|||+ -+|+.+....+-++.-.+++..+
T Consensus       223 rI----v~~iGDq-~sDl~G~~~g~~RtFKLPNP~~~  254 (275)
T TIGR01680       223 NI----VGIIGDQ-WNDLKGEHRGAIRSFKLPNPCTT  254 (275)
T ss_pred             eE----EEEECCC-HHhccCCCccCcceecCCCcccc
Confidence            33    5789998 69996665334577777777443

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=98.51  E-value=2e-07  Score=74.01  Aligned_cols=99  Identities=17%  Similarity=0.151  Sum_probs=64.1

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-H---HHHHHhcCcccccceEEe-cCCCCCC----CCCHHHHHHHHHH-c
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-L---RKLLKDLNVIDLFDAVVI-SSEVGCE----KPDPRIFKAALDQ-M  212 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~---~~~l~~~gl~~~f~~i~~-~~~~~~~----Kp~~~~~~~~~~~-l  212 (261)
                      .++.||+.++++.++++|+.|+++||.+.. .   ..-|+..|...+ +.++. .+.....    .-+..-...+.++ +
T Consensus       114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy  192 (229)
T PF03767_consen  114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DHLILRPDKDPSKKSAVEYKSERRKEIEKKGY  192 (229)
T ss_dssp             GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SCGEEEEESSTSS------SHHHHHHHHHTTE
T ss_pred             CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-chhccccccccccccccccchHHHHHHHHcCC
Confidence            488999999999999999999999997644 2   556777886533 43332 2221111    1133445556555 4


Q ss_pred             CCCCCcEEEEcCCchhhhHHHHhC---CCeEEEECCCC
Q 024886          213 SVEASRTVHIGDDEKADKQGANSL---GIDCWLWGIDV  247 (261)
Q Consensus       213 ~~~~~~~l~iGD~~~~Di~~a~~~---G~~~i~v~~~~  247 (261)
                      .|    +.+|||+ .+|+..++..   |-+.+..+++.
T Consensus       193 ~I----i~~iGD~-~~D~~~~~~~~~~~~r~f~lPNp~  225 (229)
T PF03767_consen  193 RI----IANIGDQ-LSDFSGAKTAGARAERWFKLPNPM  225 (229)
T ss_dssp             EE----EEEEESS-GGGCHCTHHHHHHHTTEEE-TTSS
T ss_pred             cE----EEEeCCC-HHHhhcccccccccceEEEcCCCC
Confidence            55    7899999 7999884332   34566666553

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=98.50  E-value=7.7e-06  Score=73.45  Aligned_cols=51  Identities=10%  Similarity=0.074  Sum_probs=42.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEE--cCCchhhhHHHHhCCCeEEEECCCCCCh
Q 024886          198 EKPDPRIFKAALDQMSVEASRTVHI--GDDEKADKQGANSLGIDCWLWGIDVKTF  250 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~~~~l~i--GD~~~~Di~~a~~~G~~~i~v~~~~~~~  250 (261)
                      +-.|..+++.+++.+|++.++++.|  ||+ .||+.|.+.+|.++ .++.+...+
T Consensus       611 gvdKG~AL~~L~e~~gI~~~eViafalGDs-~NDisMLe~Ag~gV-AM~~~~~~~  663 (694)
T PRK14502        611 GNDKGKAIKILNELFRLNFGNIHTFGLGDS-ENDYSMLETVDSPI-LVQRPGNKW  663 (694)
T ss_pred             CCCHHHHHHHHHHHhCCCccceEEEEcCCc-HhhHHHHHhCCceE-EEcCCCCCC
Confidence            4556779999999999999999999  999 89999999999876 555554433

>PTZ00174 phosphomannomutase; Provisional

Probab=98.44  E-value=3.5e-07  Score=73.75  Aligned_cols=60  Identities=10%  Similarity=-0.090  Sum_probs=50.3

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CchhhhHHHHhCCCeEEEECCCCCChHHHHHhhhc
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGD----DEKADKQGANSLGIDCWLWGIDVKTFSDVQNRILI  259 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD----~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~~  259 (261)
                      ...+-.|..+++.+++.    ++++++|||    + .||++|.+.+|..++.|.++.+.++.+++++.+
T Consensus       183 ~~~gvsKg~al~~L~~~----~~eviafGD~~~~~-~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~~  246 (247)
T PTZ00174        183 FPKGWDKTYCLRHLEND----FKEIHFFGDKTFEG-GNDYEIYNDPRTIGHSVKNPEDTIKILKELFLK  246 (247)
T ss_pred             eeCCCcHHHHHHHHHhh----hhhEEEEcccCCCC-CCcHhhhhcCCCceEEeCCHHHHHHHHHHHhcC
Confidence            44556677789999988    699999999    7 799999999988888898888888888887754

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=98.41  E-value=1e-06  Score=70.96  Aligned_cols=51  Identities=10%  Similarity=0.059  Sum_probs=39.5

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      +..-.|..+..++++++++++++++++||| .||+.|. ..+..+|.|++...
T Consensus       161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDS-gND~~mL-~~~~~~vvV~Na~~  211 (247)
T PF05116_consen  161 PKGASKGAALRYLMERWGIPPEQVLVAGDS-GNDLEML-EGGDHGVVVGNAQP  211 (247)
T ss_dssp             ETT-SHHHHHHHHHHHHT--GGGEEEEESS-GGGHHHH-CCSSEEEE-TTS-H
T ss_pred             cCCCCHHHHHHHHHHHhCCCHHHEEEEeCC-CCcHHHH-cCcCCEEEEcCCCH
Confidence            344557779999999999999999999999 8999999 67778889988543

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PLN02382 probable sucrose-phosphatase

Probab=98.40  E-value=7.8e-06  Score=70.65  Aligned_cols=58  Identities=9%  Similarity=-0.000  Sum_probs=48.8

Q ss_pred             CCCCCCCHHHHHHHHHHc---CCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          195 VGCEKPDPRIFKAALDQM---SVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l---~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      ++.+-.|..+++.+++.+   |++++++++|||+ .||++|.+.+|..++.++++...+++.
T Consensus       170 ~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs-~NDleMl~~ag~~gvam~NA~~elk~~  230 (413)
T PLN02382        170 LPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDS-GNDAELFSVPDVYGVMVSNAQEELLQW  230 (413)
T ss_pred             EeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCC-HHHHHHHhcCCCCEEEEcCCcHHHHHH
Confidence            334555677999999999   9999999999999 899999999996666888887766654

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=98.32  E-value=2.2e-05  Score=62.32  Aligned_cols=42  Identities=19%  Similarity=0.230  Sum_probs=34.9

Q ss_pred             CCCHHHHHHHHHHcCC--CCCcEEEEcCCchhhhHHHHhCCCeEE
Q 024886          199 KPDPRIFKAALDQMSV--EASRTVHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       199 Kp~~~~~~~~~~~l~~--~~~~~l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                      -.+..+.+.+++.+++  +++++++|||+ .||+.|.+.+|++++
T Consensus       180 ~sK~~al~~l~~~~~~~~~~~~~i~~GD~-~nD~~ml~~ag~~v~  223 (225)
T TIGR02461       180 SDKGKAIKRLLDLYKLRPGAIESVGLGDS-ENDFPMFEVVDLAFL  223 (225)
T ss_pred             CCHHHHHHHHHHHhccccCcccEEEEcCC-HHHHHHHHhCCCcEe
Confidence            3345588888888866  67799999999 899999999998764

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=98.29  E-value=5e-06  Score=61.42  Aligned_cols=92  Identities=16%  Similarity=0.183  Sum_probs=61.6

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCchH-H----HHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          147 HGAYQSILLLKDAGVKVAVVSNFDTR-L----RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       147 ~g~~~~l~~L~~~g~~i~i~T~~~~~-~----~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      .-+++++.-..+.|-.|+.+|+.... .    ..+-+.+.+......++..+..   ||...--...++..++.    ++
T Consensus       117 evA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~---k~~qy~Kt~~i~~~~~~----Ih  189 (237)
T COG3700         117 EVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP---KPGQYTKTQWIQDKNIR----IH  189 (237)
T ss_pred             HHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCC---CcccccccHHHHhcCce----EE
Confidence            34567777777889999999986632 2    3334456676555566654432   33322334456666664    89


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +||+ .+||.+|+++|.+.|-+-+.
T Consensus       190 YGDS-D~Di~AAkeaG~RgIRilRA  213 (237)
T COG3700         190 YGDS-DNDITAAKEAGARGIRILRA  213 (237)
T ss_pred             ecCC-chhhhHHHhcCccceeEEec
Confidence            9999 99999999999998755443

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.23  E-value=3.3e-06  Score=79.89  Aligned_cols=99  Identities=12%  Similarity=0.172  Sum_probs=78.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC----------------CCCCCHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG----------------CEKPDPRIFK  206 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~  206 (261)
                      +++||+.+.++.|++.|+++.++|+.... ...+.+..|+...++.++...+..                .....|+--.
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~  607 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM  607 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence            46899999999999999999999998877 799999999987666554443322                2235566667


Q ss_pred             HHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          207 AALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      .+++.++-..+.+.|+||. .||+.+++.|+++. .++
T Consensus       608 ~iv~~lq~~g~~v~mvGDG-vND~pAl~~AdVGi-a~g  643 (884)
T TIGR01522       608 KIVKALQKRGDVVAMTGDG-VNDAPALKLADIGV-AMG  643 (884)
T ss_pred             HHHHHHHHCCCEEEEECCC-cccHHHHHhCCeeE-ecC
Confidence            7777776667899999999 89999999999765 455

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=98.21  E-value=4.1e-05  Score=53.74  Aligned_cols=92  Identities=15%  Similarity=0.188  Sum_probs=75.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ++|+.+.+.+++|++- +.++|+|+.... +....+..|+.  .+.++.       -.+++.-..++++++-+-+.+++|
T Consensus        30 klf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~--~~rv~a-------~a~~e~K~~ii~eLkk~~~k~vmV   99 (152)
T COG4087          30 KLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP--VERVFA-------GADPEMKAKIIRELKKRYEKVVMV   99 (152)
T ss_pred             EEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc--eeeeec-------ccCHHHHHHHHHHhcCCCcEEEEe
Confidence            7899999999999999 999999986655 78888888865  344432       235667888999999888999999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCC
Q 024886          223 GDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ||. .||+-+.+++....+.+++.
T Consensus       100 GnG-aND~laLr~ADlGI~tiq~e  122 (152)
T COG4087         100 GNG-ANDILALREADLGICTIQQE  122 (152)
T ss_pred             cCC-cchHHHhhhcccceEEeccC
Confidence            998 89999999998887666643

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.17  E-value=0.00014  Score=59.05  Aligned_cols=44  Identities=16%  Similarity=0.076  Sum_probs=35.4

Q ss_pred             CCCCHHHHHHHHHHcCCC--CCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          198 EKPDPRIFKAALDQMSVE--ASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~--~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      +-++..+.+.+.+.+.-.  +-.++.+||+ +||+.|.+.+-..++.
T Consensus       206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDs-pND~~mLe~~D~~vvi  251 (302)
T PRK12702        206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCS-PPDLAFLRWSEQKVVL  251 (302)
T ss_pred             CCCHHHHHHHHHHHHHhccCCceEEEecCC-hhhHHHHHhCCeeEEe
Confidence            445667888888887654  5589999999 8999999999988754

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=98.17  E-value=1.2e-05  Score=69.55  Aligned_cols=103  Identities=17%  Similarity=0.153  Sum_probs=69.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhc---------CcccccceEEecCC-----------------C
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDL---------NVIDLFDAVVISSE-----------------V  195 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~---------gl~~~f~~i~~~~~-----------------~  195 (261)
                      +..-|.+..+|+.|+++|.+++++||++-+ ....++.+         .+.++||.|++.-.                 .
T Consensus       182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~  261 (448)
T PF05761_consen  182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET  261 (448)
T ss_dssp             EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred             ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence            445688999999999999999999999866 55555532         46789999987521                 1


Q ss_pred             C---CCC------C----CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhC-CCeEEEECC
Q 024886          196 G---CEK------P----DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSL-GIDCWLWGI  245 (261)
Q Consensus       196 ~---~~K------p----~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~-G~~~i~v~~  245 (261)
                      +   .++      +    .......+.+.+|....+++||||+...||..++.. ||.+++|-.
T Consensus       262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~  325 (448)
T PF05761_consen  262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIP  325 (448)
T ss_dssp             SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred             CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence            1   011      0    112367888889999999999999999999988888 999988843

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=98.16  E-value=0.00012  Score=64.44  Aligned_cols=93  Identities=9%  Similarity=0.086  Sum_probs=56.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh-cCccccc--------ceEEecCCCCC-CCCCHHHHHHHHHHc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKD-LNVIDLF--------DAVVISSEVGC-EKPDPRIFKAALDQM  212 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~-~gl~~~f--------~~i~~~~~~~~-~Kp~~~~~~~~~~~l  212 (261)
                      .+.|.+.+   .++++|.. +|+|+++.. ++.+.+. +|++..+        ++.+++.-.+. .--..+-...+.+.+
T Consensus       110 ~l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~  185 (497)
T PLN02177        110 DVHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEF  185 (497)
T ss_pred             hcCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHh
Confidence            35555554   44567755 999998887 7999976 7865331        22222221111 000112344455667


Q ss_pred             CCCCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          213 SVEASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       213 ~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      |.+..+ +.+||+ .+|..+...++-..+.
T Consensus       186 g~~~~~-~aYgDS-~sD~plL~~a~e~y~V  213 (497)
T PLN02177        186 GDALPD-LGLGDR-ETDHDFMSICKEGYMV  213 (497)
T ss_pred             CCCCce-EEEECC-ccHHHHHHhCCccEEe
Confidence            765555 899999 7999999999976643

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=98.15  E-value=1.5e-05  Score=58.25  Aligned_cols=88  Identities=19%  Similarity=0.175  Sum_probs=61.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchHH----HHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTRL----RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~----~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .+..++...|..++++ .+++.+|+...++    ..++..-.+.  ++.+...+.  ..|      -..++.++++    
T Consensus        72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~ih--~~~l~i~g~--h~K------V~~vrth~id----  136 (194)
T COG5663          72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQNIH--YDHLEIVGL--HHK------VEAVRTHNID----  136 (194)
T ss_pred             HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhccc--hhhhhhhcc--ccc------chhhHhhccC----
Confidence            4456777888888877 7899999876654    4555555432  454433221  122      2357778887    


Q ss_pred             EEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          220 VHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +++.|+.++-++.|+++|++++.+++.
T Consensus       137 lf~ed~~~na~~iAk~~~~~vilins~  163 (194)
T COG5663         137 LFFEDSHDNAGQIAKNAGIPVILINSP  163 (194)
T ss_pred             ccccccCchHHHHHHhcCCcEEEecCc
Confidence            799999999999999999999999776

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=98.12  E-value=2.9e-05  Score=60.36  Aligned_cols=84  Identities=17%  Similarity=0.160  Sum_probs=59.5

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH--H---HHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR--L---RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~--~---~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ..+.||+.++++..-.+|..|+.+||.+.+  .   ..-|.+.|+....+.-+---  ...|++..-++.+.+.+.+   
T Consensus       121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk--k~~k~Ke~R~~~v~k~~~i---  195 (274)
T COG2503         121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK--KDKKSKEVRRQAVEKDYKI---  195 (274)
T ss_pred             cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe--eCCCcHHHHHHHHhhccce---
Confidence            488999999999999999999999998754  2   34566778765443222211  2356666667777775554   


Q ss_pred             cEEEEcCCchhhhHHH
Q 024886          218 RTVHIGDDEKADKQGA  233 (261)
Q Consensus       218 ~~l~iGD~~~~Di~~a  233 (261)
                       ++.|||+ ..|....
T Consensus       196 -Vm~vGDN-l~DF~d~  209 (274)
T COG2503         196 -VMLVGDN-LDDFGDN  209 (274)
T ss_pred             -eeEecCc-hhhhcch
Confidence             8999998 5886543

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=98.09  E-value=5.3e-06  Score=62.20  Aligned_cols=92  Identities=15%  Similarity=0.173  Sum_probs=59.5

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCc-ccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNV-IDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV  220 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl-~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  220 (261)
                      +.+.||+.++|+.+.+. +.++|.|.+... +..+++.+.- ..+|+.++..+.....+..   +..-++.+|-++++++
T Consensus        35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~~---~~KdL~~l~~~~~~vv  110 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKGS---YIKDLSKLGRDLDNVV  110 (159)
T ss_dssp             EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETTE---EE--GGGSSS-GGGEE
T ss_pred             EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhccccccccccccccccccc---cccchHHHhhccccEE
Confidence            57899999999999777 999999998877 7888888875 4678888876654311111   1134666677899999


Q ss_pred             EEcCCchhhhHHHHhCCCe
Q 024886          221 HIGDDEKADKQGANSLGID  239 (261)
Q Consensus       221 ~iGD~~~~Di~~a~~~G~~  239 (261)
                      +|.|+ +.-...-...++.
T Consensus       111 ivDD~-~~~~~~~~~N~i~  128 (159)
T PF03031_consen  111 IVDDS-PRKWALQPDNGIP  128 (159)
T ss_dssp             EEES--GGGGTTSGGGEEE
T ss_pred             EEeCC-HHHeeccCCceEE
Confidence            99776 4544333333433

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=98.09  E-value=1.6e-05  Score=73.77  Aligned_cols=88  Identities=19%  Similarity=0.218  Sum_probs=66.6

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      +++||+.+.++.|++.|++++++|+.... ...+.+.+|+..++      +..+..|  +.    ++++++ .+..++||
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~------~~~p~~K--~~----~v~~l~-~~~~v~mv  634 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA------GLLPEDK--VK----AVTELN-QHAPLAMV  634 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec------CCCHHHH--HH----HHHHHh-cCCCEEEE
Confidence            56899999999999999999999998777 79999999985322      1122223  22    344444 23689999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCC
Q 024886          223 GDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ||. .||..+++.++++. .++++
T Consensus       635 GDg-iNDapAl~~A~vgi-a~g~~  656 (741)
T PRK11033        635 GDG-INDAPAMKAASIGI-AMGSG  656 (741)
T ss_pred             ECC-HHhHHHHHhCCeeE-EecCC
Confidence            999 89999999999665 55665

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.07  E-value=3e-05  Score=65.63  Aligned_cols=100  Identities=23%  Similarity=0.233  Sum_probs=86.5

Q ss_pred             eeeCccH--HHHHHHHHHCCCeEEEEeCCc--hH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGA--YQSILLLKDAGVKVAVVSNFD--TR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~--~~~l~~L~~~g~~i~i~T~~~--~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ..++|..  .++.+.+.++|.++.++|...  .. ++.+|...|.+-.--.++.|.+....|.+...|..+++.-++++.
T Consensus        96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~  175 (635)
T COG5610          96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPK  175 (635)
T ss_pred             eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChh
Confidence            4566654  578899999999999999854  44 699999999765555688888888999999999999999999999


Q ss_pred             cEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          218 RTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       218 ~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      .++++||+...|..++++.|+.+.+
T Consensus       176 ~w~H~GDN~~aD~l~pk~LgI~Tlf  200 (635)
T COG5610         176 KWIHCGDNWVADYLKPKNLGISTLF  200 (635)
T ss_pred             heEEecCchhhhhcCccccchhHHH
Confidence            9999999999999999999998853

>PLN02645 phosphoglycolate phosphatase

Probab=98.01  E-value=5.4e-05  Score=63.16  Aligned_cols=88  Identities=18%  Similarity=0.201  Sum_probs=66.7

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .++||+.++|+.|+++|++++++||++..    ....++.+|+...++.++++..         .....++..+....+.
T Consensus        44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~---------~~~~~l~~~~~~~~~~  114 (311)
T PLN02645         44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF---------AAAAYLKSINFPKDKK  114 (311)
T ss_pred             ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH---------HHHHHHHhhccCCCCE
Confidence            67899999999999999999999997732    3455678898777777776543         4445555555544445


Q ss_pred             EEEcCCchhhhHHHHhCCCeEE
Q 024886          220 VHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                      ++++++ ..+.+.++.+|+..+
T Consensus       115 V~viG~-~~~~~~l~~~Gi~~~  135 (311)
T PLN02645        115 VYVIGE-EGILEELELAGFQYL  135 (311)
T ss_pred             EEEEcC-HHHHHHHHHCCCEEe
Confidence            777777 789999999999764

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=97.97  E-value=0.00036  Score=56.22  Aligned_cols=100  Identities=19%  Similarity=0.301  Sum_probs=69.2

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchHH----HHHHHhcCcc--cc-c--ceEE----e-c---------CC--CCCC
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTRL----RKLLKDLNVI--DL-F--DAVV----I-S---------SE--VGCE  198 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~----~~~l~~~gl~--~~-f--~~i~----~-~---------~~--~~~~  198 (261)
                      ..-+.+.++++.|.+.|+++..+|......    ...|+.+|++  .. |  +.++    . .         ++  ...+
T Consensus        81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~  160 (252)
T PF11019_consen   81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG  160 (252)
T ss_pred             EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence            445788899999999999999999977552    4556677764  10 0  0111    0 0         00  1134


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHh----CCCeEEEEC
Q 024886          199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANS----LGIDCWLWG  244 (261)
Q Consensus       199 Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~----~G~~~i~v~  244 (261)
                      -++..++..++...|..|+.++||.|+ ..++....+    .|+..+++-
T Consensus       161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~-~~nl~sv~~a~k~~~I~f~G~~  209 (252)
T PF11019_consen  161 QDKGEVLKYFLDKINQSPKKIIFIDDN-KENLKSVEKACKKSGIDFIGFH  209 (252)
T ss_pred             CccHHHHHHHHHHcCCCCCeEEEEeCC-HHHHHHHHHHHhhCCCcEEEEE
Confidence            567789999999999999999999887 788865543    477665443

The function is not known.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.95  E-value=0.00011  Score=58.90  Aligned_cols=79  Identities=25%  Similarity=0.363  Sum_probs=59.1

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC------------------------------
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE------------------------------  194 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~------------------------------  194 (261)
                      .|.+.+.|.+|++.|..+++.|-+.++ +...++.+++..+||.+++...                              
T Consensus       144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~  223 (297)
T PF05152_consen  144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTN  223 (297)
T ss_pred             ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCc
Confidence            466778899999999999999988877 7999999999999999988532                              


Q ss_pred             -CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC
Q 024886          195 -VGCEKPDPRIFKAALDQMSVEASRTVHIGDD  225 (261)
Q Consensus       195 -~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~  225 (261)
                       .+.+| +|......+++.|+..-..+-.-|+
T Consensus       224 ~~~LPK-SPrVVL~yL~k~gvny~KtiTLVDD  254 (297)
T PF05152_consen  224 VNNLPK-SPRVVLWYLRKKGVNYFKTITLVDD  254 (297)
T ss_pred             CCCCCC-CCeehHHHHHHcCCceeeeEEEecc
Confidence             01222 4557778888888875444433355

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.92  E-value=0.00011  Score=52.42  Aligned_cols=47  Identities=17%  Similarity=0.251  Sum_probs=34.7

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----------------HHHHHHhcCcccccceEEec
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----------------LRKLLKDLNVIDLFDAVVIS  192 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----------------~~~~l~~~gl~~~f~~i~~~  192 (261)
                      .+.+++.+.++.++++|+.++++|+.+..                ...+|++.++.  +|.++..
T Consensus        24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~~   86 (126)
T TIGR01689        24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYVG   86 (126)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEeC
Confidence            45667888899999999999999987632                25667777775  5666543

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.91  E-value=6e-05  Score=56.14  Aligned_cols=77  Identities=18%  Similarity=0.148  Sum_probs=58.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc-ccc-ceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI-DLF-DAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~-~~f-~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      ..++||+.++|+.|++. ++++|+|++.+. +..+++.++.. .+| +.+++.++..  .+.   .+-+-.-++.+.+.+
T Consensus        57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~--~~~---~KdL~~i~~~d~~~v  130 (156)
T TIGR02250        57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG--SPH---TKSLLRLFPADESMV  130 (156)
T ss_pred             EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC--CCc---cccHHHHcCCCcccE
Confidence            57899999999999966 999999999988 79999999987 478 6677666533  111   112224457889999


Q ss_pred             EEEcCC
Q 024886          220 VHIGDD  225 (261)
Q Consensus       220 l~iGD~  225 (261)
                      ++|.|+
T Consensus       131 vivDd~  136 (156)
T TIGR02250       131 VIIDDR  136 (156)
T ss_pred             EEEeCC
Confidence            999665

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=97.91  E-value=3.6e-05  Score=70.05  Aligned_cols=96  Identities=14%  Similarity=0.172  Sum_probs=70.2

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ++.||+.+.++.|++.|+++.++|+.... ...+.+.+|+++++.     +    ..|  +--..+++.+.-....+.|+
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a-----~----~~P--edK~~~v~~lq~~g~~Vamv  514 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIA-----E----ATP--EDKIALIRQEQAEGKLVAMT  514 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEc-----C----CCH--HHHHHHHHHHHHcCCeEEEE
Confidence            46799999999999999999999997777 799999999864332     1    122  23333333333334579999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCCChHH
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~~~~e  252 (261)
                      ||. .||..+.+.++++. .++++.+-..+
T Consensus       515 GDG-~NDapAL~~AdvGi-Am~~gt~~ake  542 (675)
T TIGR01497       515 GDG-TNDAPALAQADVGV-AMNSGTQAAKE  542 (675)
T ss_pred             CCC-cchHHHHHhCCEeE-EeCCCCHHHHH
Confidence            999 89999999999876 56666443333

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.88  E-value=2.7e-05  Score=74.05  Aligned_cols=103  Identities=12%  Similarity=0.137  Sum_probs=73.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc----ceEEecCC----------------CCCCCCCH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF----DAVVISSE----------------VGCEKPDP  202 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f----~~i~~~~~----------------~~~~Kp~~  202 (261)
                      ++.|++.+.++.|++.|++++++|+.... ...+.+..|+...-    +..+...+                .-.+...|
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P  616 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP  616 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence            46899999999999999999999997766 78899999975311    11111110                01122233


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      +--..+++.++-..+.+.++||+ .||+.+.+.|+++. .++++.+
T Consensus       617 ~~K~~iV~~lq~~g~~va~iGDG-~ND~~alk~AdVGi-a~g~g~~  660 (917)
T TIGR01116       617 SHKSELVELLQEQGEIVAMTGDG-VNDAPALKKADIGI-AMGSGTE  660 (917)
T ss_pred             HHHHHHHHHHHhcCCeEEEecCC-cchHHHHHhCCeeE-ECCCCcH
Confidence            34466666666667888999999 89999999999865 6666633

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=97.80  E-value=8e-05  Score=67.90  Aligned_cols=101  Identities=11%  Similarity=0.137  Sum_probs=76.3

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ++.|++.+.+++|++.|+++.++|+.... ...+-+.+|+.++|..         .  .|+--..+.+.++-..+-+.|+
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~---------~--~PedK~~iV~~lQ~~G~~VaMt  509 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE---------C--KPEDKINVIREEQAKGHIVAMT  509 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC---------C--CHHHHHHHHHHHHhCCCEEEEE
Confidence            46899999999999999999999997777 7999999999653321         1  3344555556665555779999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ||. .||..+.+.|.++. .++++.+-.+|..+++
T Consensus       510 GDG-vNDAPALa~ADVGI-AMgsGTdvAkeAADiV  542 (673)
T PRK14010        510 GDG-TNDAPALAEANVGL-AMNSGTMSAKEAANLI  542 (673)
T ss_pred             CCC-hhhHHHHHhCCEEE-EeCCCCHHHHHhCCEE
Confidence            998 89999999998765 6777755555544443

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=97.76  E-value=0.00035  Score=51.57  Aligned_cols=91  Identities=23%  Similarity=0.246  Sum_probs=56.6

Q ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhc-----CcccccceEEecC---------CCCCCCCCHHHHH
Q 024886          145 LPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDL-----NVIDLFDAVVISS---------EVGCEKPDPRIFK  206 (261)
Q Consensus       145 ~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~-----gl~~~f~~i~~~~---------~~~~~Kp~~~~~~  206 (261)
                      ..+|+.++.+.+.++||++..+|+.+..    .+.+|...     ++.+  ..+..+.         ++-..  +|+.|+
T Consensus        28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~--Gpv~~sP~~l~~al~rEvi~~--~p~~fK  103 (157)
T PF08235_consen   28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD--GPVLLSPDSLFSALHREVISK--DPEEFK  103 (157)
T ss_pred             hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC--CCEEECCcchhhhhhcccccc--ChHHHH
Confidence            3478999999999999999999998743    26777766     3321  1222221         11122  333433


Q ss_pred             -----HHHHHcC-CCCCcEEEEcCCchhhhHHHHhCCCeE
Q 024886          207 -----AALDQMS-VEASRTVHIGDDEKADKQGANSLGIDC  240 (261)
Q Consensus       207 -----~~~~~l~-~~~~~~l~iGD~~~~Di~~a~~~G~~~  240 (261)
                           .+...+. ....=...+|.. .+|+.+=+++|+..
T Consensus       104 ~~~L~~l~~~f~~~~~pf~agfGN~-~tDv~aY~~vGip~  142 (157)
T PF08235_consen  104 IACLRDLRALFPPDGNPFYAGFGNR-STDVIAYKAVGIPK  142 (157)
T ss_pred             HHHHHHHHHhcCCCCCeEEEecCCc-HHHHHHHHHcCCCh
Confidence                 3333333 122224458887 89999999999964

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=97.72  E-value=0.00012  Score=66.77  Aligned_cols=101  Identities=14%  Similarity=0.181  Sum_probs=75.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ++.||+.+.++.|++.|+++.++|+.... ...+-+.+|++++|..         .  .|+--..+.+.++-..+-+.|+
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~---------~--~PedK~~iV~~lQ~~G~~VaMt  513 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAE---------A--TPEDKLALIRQEQAEGRLVAMT  513 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEcc---------C--CHHHHHHHHHHHHHcCCeEEEE
Confidence            35799999999999999999999997777 7999999999653321         1  3334445555555445679999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ||. .||..+.+.|.++. .++++.+-.+|..+++
T Consensus       514 GDG-vNDAPALa~ADVGI-AMgsGTdvAkeAADiV  546 (679)
T PRK01122        514 GDG-TNDAPALAQADVGV-AMNSGTQAAKEAGNMV  546 (679)
T ss_pred             CCC-cchHHHHHhCCEeE-EeCCCCHHHHHhCCEE
Confidence            998 89999999998776 6767755444444433

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=97.70  E-value=0.00064  Score=52.37  Aligned_cols=91  Identities=10%  Similarity=0.110  Sum_probs=57.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccc--cceEEecCC----------CC--CCCCCHHHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDL--FDAVVISSE----------VG--CEKPDPRIFKAA  208 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~--f~~i~~~~~----------~~--~~Kp~~~~~~~~  208 (261)
                      ...|++.++|+.+.+. |.|+|.|++... +..++..+++...  +...+.-+.          .+  ..|+    +..+
T Consensus        45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~~l  119 (195)
T TIGR02245        45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LGVI  119 (195)
T ss_pred             EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEee----cHHh
Confidence            5679999999999986 999999998876 8888888765321  111111111          11  1233    3344


Q ss_pred             HHHcC--CCCCcEEEEcCCchhhhHHHHhCCCeE
Q 024886          209 LDQMS--VEASRTVHIGDDEKADKQGANSLGIDC  240 (261)
Q Consensus       209 ~~~l~--~~~~~~l~iGD~~~~Di~~a~~~G~~~  240 (261)
                      .+.+|  .+.+++++|.|+ +....+=-..|+..
T Consensus       120 w~~l~~~~~~~ntiiVDd~-p~~~~~~P~N~i~I  152 (195)
T TIGR02245       120 WALLPEFYSMKNTIMFDDL-RRNFLMNPQNGLKI  152 (195)
T ss_pred             hhhcccCCCcccEEEEeCC-HHHHhcCCCCcccc
Confidence            44554  378999999776 45544443445544

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.64  E-value=0.00017  Score=66.00  Aligned_cols=98  Identities=17%  Similarity=0.267  Sum_probs=72.2

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ++.|++.+.++.|++.|+++.++|+..+. .+.+-+.+|+++++...         +|  +--...++++.-....+.||
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Ael---------lP--edK~~~V~~l~~~g~~VamV  605 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAEL---------LP--EDKAEIVRELQAEGRKVAMV  605 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccC---------Cc--HHHHHHHHHHHhcCCEEEEE
Confidence            46889999999999999999999997777 79999999997655444         22  12333444444444779999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                      ||. .||..+...+-++. .++.|.+-..|-+
T Consensus       606 GDG-INDAPALA~AdVGi-AmG~GtDvA~eaA  635 (713)
T COG2217         606 GDG-INDAPALAAADVGI-AMGSGTDVAIEAA  635 (713)
T ss_pred             eCC-chhHHHHhhcCeeE-eecCCcHHHHHhC
Confidence            998 89998888887665 6666644333333

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=97.56  E-value=0.00042  Score=54.23  Aligned_cols=81  Identities=15%  Similarity=0.088  Sum_probs=57.4

Q ss_pred             EEEEeCCc-hHHHHHHHhcCccccc--ceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCe
Q 024886          163 VAVVSNFD-TRLRKLLKDLNVIDLF--DAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGID  239 (261)
Q Consensus       163 i~i~T~~~-~~~~~~l~~~gl~~~f--~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~  239 (261)
                      =++||++. ...-...--+|++.+|  +.|+++..+  +  +...|+.+.+++|-+....++|||. ...-++|+..+|+
T Consensus       178 NvLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kv--G--K~~cFe~I~~Rfg~p~~~f~~IGDG-~eEe~aAk~l~wP  252 (274)
T TIGR01658       178 NVLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKV--G--KLQCFKWIKERFGHPKVRFCAIGDG-WEECTAAQAMNWP  252 (274)
T ss_pred             EEEEEcCccHHHHHHHHHhccCCccccccccchhhc--c--hHHHHHHHHHHhCCCCceEEEeCCC-hhHHHHHHhcCCC
Confidence            34455443 3322222234455555  688877664  3  4559999999999988899999998 6888999999999


Q ss_pred             EEEECCCCC
Q 024886          240 CWLWGIDVK  248 (261)
Q Consensus       240 ~i~v~~~~~  248 (261)
                      ++-++...+
T Consensus       253 Fw~I~~h~D  261 (274)
T TIGR01658       253 FVKIDLHPD  261 (274)
T ss_pred             eEEeecCCC
Confidence            998877654

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=97.55  E-value=0.00029  Score=57.81  Aligned_cols=98  Identities=21%  Similarity=0.214  Sum_probs=68.1

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhc---CcccccceEEecCCCC-----CCCCCH--------------
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDL---NVIDLFDAVVISSEVG-----CEKPDP--------------  202 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~---gl~~~f~~i~~~~~~~-----~~Kp~~--------------  202 (261)
                      -|....+|+.|+++|.+++++||++.. +..=++.+   .+-+.||.++.--.-+     ..+|-.              
T Consensus       242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv  321 (510)
T KOG2470|consen  242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKV  321 (510)
T ss_pred             cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhh
Confidence            356778999999999999999999977 55444432   4667788777532100     011100              


Q ss_pred             -----------HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHH-hCCCeEEEE
Q 024886          203 -----------RIFKAALDQMSVEASRTVHIGDDEKADKQGAN-SLGIDCWLW  243 (261)
Q Consensus       203 -----------~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~-~~G~~~i~v  243 (261)
                                 ..+...++.-|....+++++||.+.+|+.... +.||.+-++
T Consensus       322 ~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI  374 (510)
T KOG2470|consen  322 DKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI  374 (510)
T ss_pred             hhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence                       01345555668888999999999999998887 899987443

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=97.43  E-value=0.00056  Score=64.86  Aligned_cols=110  Identities=9%  Similarity=0.156  Sum_probs=76.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC----------------CCCCCHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG----------------CEKPDPRIFK  206 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~  206 (261)
                      ++.|++.+.++.|++.|+++.++|+.... ...+-+.+|+..  +.++...+..                ...-.|+--.
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~  592 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKS  592 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence            45789999999999999999999997776 789999999852  1222221110                1112333344


Q ss_pred             HHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          207 AALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      .+.+.+.-..+.+.|+||. .||..+.+.|.++. .++++.+-.++..+++
T Consensus       593 ~iV~~lq~~G~vVam~GDG-vNDapALk~AdVGI-Amg~gtdvAk~aADiV  641 (867)
T TIGR01524       593 RIIGLLKKAGHTVGFLGDG-INDAPALRKADVGI-SVDTAADIAKEASDII  641 (867)
T ss_pred             HHHHHHHhCCCEEEEECCC-cccHHHHHhCCEEE-EeCCccHHHHHhCCEE
Confidence            4455554445679999998 89999999999876 5667755555555544

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=97.41  E-value=0.0024  Score=52.00  Aligned_cols=54  Identities=24%  Similarity=0.287  Sum_probs=41.6

Q ss_pred             CCCCCCHHHHHHHHHHc--------C-CCCCcEEEEcCCchhhhHHHH---------------hCCCeEEEECCCCCC
Q 024886          196 GCEKPDPRIFKAALDQM--------S-VEASRTVHIGDDEKADKQGAN---------------SLGIDCWLWGIDVKT  249 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l--------~-~~~~~~l~iGD~~~~Di~~a~---------------~~G~~~i~v~~~~~~  249 (261)
                      ..+||.+-.|.++...+        + -++....+|||++..|+..|.               +-||.+|+|-+|+.+
T Consensus       268 t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~  345 (389)
T KOG1618|consen  268 TLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYN  345 (389)
T ss_pred             ccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeeec
Confidence            46899887776655443        2 256788999999999999996               779999998777544

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=97.38  E-value=0.00035  Score=65.23  Aligned_cols=108  Identities=11%  Similarity=0.081  Sum_probs=76.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCC----------------------CCCCC
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEV----------------------GCEKP  200 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~----------------------~~~Kp  200 (261)
                      ++.|++.+.++.|++.|+++.++|+.... ...+-+..|+.+.   ++..+++                      -...-
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~  518 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV  518 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence            56789999999999999999999998777 7899999998631   1111111                      11222


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      .|+--..+.+.+.-..+-+.|+||. .||..+.+.|.++. .++++.+-.++.+++
T Consensus       519 ~Pe~K~~iV~~lq~~G~~VamvGDG-vNDapAL~~AdVGI-Am~~gtdvAkeaADi  572 (755)
T TIGR01647       519 FPEHKYEIVEILQKRGHLVGMTGDG-VNDAPALKKADVGI-AVAGATDAARSAADI  572 (755)
T ss_pred             CHHHHHHHHHHHHhcCCEEEEEcCC-cccHHHHHhCCeeE-EecCCcHHHHHhCCE
Confidence            3444455556565556789999998 89999999998875 566665444444443

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=97.35  E-value=0.00079  Score=64.07  Aligned_cols=110  Identities=15%  Similarity=0.189  Sum_probs=77.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC----------------CCCCCHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG----------------CEKPDPRIFK  206 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~  206 (261)
                      ++.|++.+.++.|++.|+++.++|+.... ...+-+.+|+..  +.++...+..                ...-.|+--.
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~  627 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS  627 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence            46789999999999999999999997776 789999999852  2222221111                1222344445


Q ss_pred             HHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          207 AALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      .+.+.+.-..+-+.|+||. .||..+.+.|.++. .++++.+-.++.++++
T Consensus       628 ~iV~~Lq~~G~vVamtGDG-vNDaPALk~ADVGI-Amg~gtdvAkeaADiV  676 (903)
T PRK15122        628 RVLKALQANGHTVGFLGDG-INDAPALRDADVGI-SVDSGADIAKESADII  676 (903)
T ss_pred             HHHHHHHhCCCEEEEECCC-chhHHHHHhCCEEE-EeCcccHHHHHhcCEE
Confidence            5555555556779999998 89999999998875 6777755555555554

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=97.33  E-value=0.00081  Score=63.93  Aligned_cols=110  Identities=15%  Similarity=0.162  Sum_probs=77.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC----------------CCCCCHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG----------------CEKPDPRIFK  206 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~  206 (261)
                      ++.|++.+.++.|++.|+++.++|+.... ...+-+.+|+..  +.++.+.+..                ...-.|+--.
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~  627 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKE  627 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHH
Confidence            46789999999999999999999997777 788999999852  2233222111                1222344445


Q ss_pred             HHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          207 AALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      .+.+.+.-..+-+.|+||. .||..+.+.|.++. .++++.+-.++..+++
T Consensus       628 ~IV~~Lq~~G~vVam~GDG-vNDaPALk~ADVGI-Amg~gtdvAkeaADiV  676 (902)
T PRK10517        628 RIVTLLKREGHVVGFMGDG-INDAPALRAADIGI-SVDGAVDIAREAADII  676 (902)
T ss_pred             HHHHHHHHCCCEEEEECCC-cchHHHHHhCCEEE-EeCCcCHHHHHhCCEE
Confidence            5555555555779999998 89999999998776 5667755455555444

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=97.32  E-value=0.00089  Score=55.85  Aligned_cols=96  Identities=16%  Similarity=0.260  Sum_probs=66.2

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCch-------------HHHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDT-------------RLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALD  210 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~-------------~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  210 (261)
                      .++|.+..=|..|.+.|+.+++.||...             .++.+...+++.  |............||...+++.+.+
T Consensus       104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vP--i~~~~A~~~~~yRKP~tGMwe~~~~  181 (422)
T KOG2134|consen  104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVP--IQLLAAIIKGKYRKPSTGMWEFLKR  181 (422)
T ss_pred             eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCc--eEEeeeccCCcccCcchhHHHHHHH
Confidence            5667777888889999999999998421             124445555553  4444444445688999999999998


Q ss_pred             HcC----CCCCcEEEEcC--------------CchhhhHHHHhCCCeEE
Q 024886          211 QMS----VEASRTVHIGD--------------DEKADKQGANSLGIDCW  241 (261)
Q Consensus       211 ~l~----~~~~~~l~iGD--------------~~~~Di~~a~~~G~~~i  241 (261)
                      .++    +.-....|+||              ....|+..|.++|+...
T Consensus       182 ~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~  230 (422)
T KOG2134|consen  182 LENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK  230 (422)
T ss_pred             HhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence            874    33444457765              22568888999888763

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=97.26  E-value=0.0033  Score=58.72  Aligned_cols=58  Identities=17%  Similarity=0.158  Sum_probs=42.7

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCC--CeEEEECCC-------CCChHHHHHhh
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLG--IDCWLWGID-------VKTFSDVQNRI  257 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G--~~~i~v~~~-------~~~~~el~~~l  257 (261)
                      .+-.|..+.+.+++  +++++.++++||+ .||+.|.+.++  ..++.+++.       ..+.+++.+.|
T Consensus       654 ~~vnKG~al~~ll~--~~~~d~vl~~GD~-~nDe~Mf~~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L  720 (726)
T PRK14501        654 AGVNKGRAVRRLLE--AGPYDFVLAIGDD-TTDEDMFRALPETAITVKVGPGESRARYRLPSQREVRELL  720 (726)
T ss_pred             CCCCHHHHHHHHHh--cCCCCEEEEECCC-CChHHHHHhcccCceEEEECCCCCcceEeCCCHHHHHHHH
Confidence            44557778899888  7788999999999 79999999873  245667665       33455555544

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=97.26  E-value=0.00077  Score=64.59  Aligned_cols=103  Identities=12%  Similarity=0.145  Sum_probs=70.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC----------------CCCCCHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG----------------CEKPDPRIFK  206 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~  206 (261)
                      ++.|++.++++.|++.|+++.++|+.... ...+-+..|+...-..++...+..                ...-.|+--.
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~  658 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ  658 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence            46789999999999999999999997776 788999999853222222221110                1122333444


Q ss_pred             HHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC-CCCC
Q 024886          207 AALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG-IDVK  248 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~-~~~~  248 (261)
                      .+.+.+.-..+-+.|+||. .||..+.+.|.++. .++ ++.+
T Consensus       659 ~iV~~lq~~g~vVam~GDG-vNDapALk~AdVGI-Amg~~gtd  699 (941)
T TIGR01517       659 LLVLMLKDMGEVVAVTGDG-TNDAPALKLADVGF-SMGISGTE  699 (941)
T ss_pred             HHHHHHHHCCCEEEEECCC-CchHHHHHhCCcce-ecCCCccH
Confidence            4555554445679999998 89999999998776 455 5533

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=97.24  E-value=0.00044  Score=53.97  Aligned_cols=46  Identities=13%  Similarity=0.190  Sum_probs=41.6

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEE
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                      .+.+.+++.+++.+++.++++++++++|||+ .+|+.+++.+|++.+
T Consensus       158 ~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~-~nD~~~~~~~~~~va  203 (204)
T TIGR01484       158 LPAGVDKGSALQALLKELNGKRDEILAFGDS-GNDEEMFEVAGLAVA  203 (204)
T ss_pred             ecCCCChHHHHHHHHHHhCCCHHHEEEEcCC-HHHHHHHHHcCCceE
Confidence            4567888889999999999999999999999 899999999998763

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=97.24  E-value=0.0069  Score=49.76  Aligned_cols=86  Identities=20%  Similarity=0.164  Sum_probs=58.7

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .++||+.++|+.|+++|.+++++||++..    ....++.+|+....+.++++..         .....+++.+....++
T Consensus        18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~v   88 (279)
T TIGR01452        18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSAL---------CAARLLRQPPDAPKAV   88 (279)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHH---------HHHHHHHhhCcCCCEE
Confidence            78899999999999999999999996522    3456788888655556654432         3334444433345678


Q ss_pred             EEEcCCchhhhHHHHhCCCeE
Q 024886          220 VHIGDDEKADKQGANSLGIDC  240 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~~  240 (261)
                      +++|+.  ...+..+..|+..
T Consensus        89 ~~iG~~--~~~~~l~~~g~~~  107 (279)
T TIGR01452        89 YVIGEE--GLRAELDAAGIRL  107 (279)
T ss_pred             EEEcCH--HHHHHHHHCCCEE
Confidence            889885  3445566667654

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=97.21  E-value=0.00036  Score=65.56  Aligned_cols=61  Identities=13%  Similarity=0.147  Sum_probs=45.4

Q ss_pred             CCCCCHHHHHHHHH---HcCCCCCcEEEEcCCchhhhHHHHhCC-------------CeEEEECCC-------CCChHHH
Q 024886          197 CEKPDPRIFKAALD---QMSVEASRTVHIGDDEKADKQGANSLG-------------IDCWLWGID-------VKTFSDV  253 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~---~l~~~~~~~l~iGD~~~~Di~~a~~~G-------------~~~i~v~~~-------~~~~~el  253 (261)
                      .+-.|..+.+.+++   .+|++++.+++|||+ .+|..|.+.++             .-+|.|+.+       ..+..|+
T Consensus       759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD-~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV  837 (854)
T PLN02205        759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDD-RSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEI  837 (854)
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCC-ccHHHHHHHhhhhccCCcccccccceeEEECCCCccCeEecCCHHHH
Confidence            34556678888874   468999999999999 79999999876             234567655       4567777


Q ss_pred             HHhhh
Q 024886          254 QNRIL  258 (261)
Q Consensus       254 ~~~l~  258 (261)
                      .++|.
T Consensus       838 ~~lL~  842 (854)
T PLN02205        838 VRLMQ  842 (854)
T ss_pred             HHHHH
Confidence            76663

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=97.16  E-value=0.0013  Score=63.56  Aligned_cols=102  Identities=11%  Similarity=0.136  Sum_probs=71.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc----------ceEEecCCCC----------------
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF----------DAVVISSEVG----------------  196 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f----------~~i~~~~~~~----------------  196 (261)
                      ++.|++.++++.|++.|++++++|+.... ...+-+..|+....          +.++.+.+..                
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V  725 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV  725 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence            56899999999999999999999998877 78999999985210          1222222111                


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC-CCC
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG-IDV  247 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~-~~~  247 (261)
                      ...-.|+--..+++.+.-..+.+.++||. .||..+.+.|.++. .++ ++.
T Consensus       726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GDG-vNDapaLk~AdVGI-Amg~~gt  775 (1053)
T TIGR01523       726 IARCAPQTKVKMIEALHRRKAFCAMTGDG-VNDSPSLKMANVGI-AMGINGS  775 (1053)
T ss_pred             EEecCHHHHHHHHHHHHhcCCeeEEeCCC-cchHHHHHhCCccE-ecCCCcc
Confidence            12223334444555555445779999998 89999999998776 354 443

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR00685 T6PP trehalose-phosphatase

Probab=96.96  E-value=0.0022  Score=51.60  Aligned_cols=58  Identities=19%  Similarity=0.113  Sum_probs=46.6

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhC-------CCeEEEECCC---------CCChHHHHHhhh
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSL-------GIDCWLWGID---------VKTFSDVQNRIL  258 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~-------G~~~i~v~~~---------~~~~~el~~~l~  258 (261)
                      .|...++.+++++++++.++++|||+ .+|+.+++.+       |..++.|..+         ..+..++.++|.
T Consensus       167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~-~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~  240 (244)
T TIGR00685       167 NKGEIVKRLLWHQPGSGISPVYLGDD-ITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLG  240 (244)
T ss_pred             CHHHHHHHHHHhcccCCCceEEEcCC-CcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHH
Confidence            34679999999999999999999999 8999999988       6677777333         456677666653

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=96.93  E-value=0.0081  Score=51.80  Aligned_cols=89  Identities=16%  Similarity=0.149  Sum_probs=66.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCc-hHHHHHHHhcCcc----cccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFD-TRLRKLLKDLNVI----DLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~-~~~~~~l~~~gl~----~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      +++....+++..|+++|+-++|.|-+. .++++..++..-.    +.|+.+-    . ..-|+.+.+..+++++|+..+.
T Consensus       255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp~MiLkeedfa~~~----i-NW~~K~eNirkIAkklNlg~dS  329 (574)
T COG3882         255 EAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHPDMILKEEDFAVFQ----I-NWDPKAENIRKIAKKLNLGLDS  329 (574)
T ss_pred             hhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCCCeEeeHhhhhhhe----e-cCCcchhhHHHHHHHhCCCccc
Confidence            344455677888999999999999655 4477777776411    1222221    1 3467888999999999999999


Q ss_pred             EEEEcCCchhhhHHHHhCCC
Q 024886          219 TVHIGDDEKADKQGANSLGI  238 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~  238 (261)
                      .+|+.|+ +...+-.++.+-
T Consensus       330 mvFiDD~-p~ErE~vk~~~~  348 (574)
T COG3882         330 MVFIDDN-PAERELVKRELP  348 (574)
T ss_pred             eEEecCC-HHHHHHHHhcCc
Confidence            9999887 788888888874

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=96.83  E-value=0.0079  Score=49.05  Aligned_cols=61  Identities=18%  Similarity=0.199  Sum_probs=47.9

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhC---CCeEEEECCC-------CCChHHHHHhh
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSL---GIDCWLWGID-------VKTFSDVQNRI  257 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~---G~~~i~v~~~-------~~~~~el~~~l  257 (261)
                      ..+-.|..+++.+++.+|++.+++++|||+ .+|+.|.+.+   |-.++.|+++       ..+..++.++|
T Consensus       170 p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~-~nD~~mf~~~~~~~g~~vavg~a~~~A~~~l~~~~~v~~~L  240 (266)
T PRK10187        170 PRGTNKGEAIAAFMQEAPFAGRTPVFVGDD-LTDEAGFAVVNRLGGISVKVGTGATQASWRLAGVPDVWSWL  240 (266)
T ss_pred             CCCCCHHHHHHHHHHhcCCCCCeEEEEcCC-ccHHHHHHHHHhcCCeEEEECCCCCcCeEeCCCHHHHHHHH
Confidence            345567789999999999999999999999 7999999988   3355678776       44566666555

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=96.82  E-value=0.009  Score=42.70  Aligned_cols=94  Identities=14%  Similarity=0.105  Sum_probs=56.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCC---chHHHH----HHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNF---DTRLRK----LLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVE  215 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~---~~~~~~----~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~  215 (261)
                      ..+.|++++.+++|... |.+||+|..   +.....    +.+.+.+-++-..++|..- +.-|.+              
T Consensus        67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnK-nivkaD--------------  130 (180)
T COG4502          67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNK-NIVKAD--------------  130 (180)
T ss_pred             cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCC-CeEEee--------------
Confidence            47789999999999888 999999975   222322    2344555555566666442 222211              


Q ss_pred             CCcEEEEcCCchhhhHHHHhCCCeEEEECCC-------CCChHHHHHhh
Q 024886          216 ASRTVHIGDDEKADKQGANSLGIDCWLWGID-------VKTFSDVQNRI  257 (261)
Q Consensus       216 ~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~-------~~~~~el~~~l  257 (261)
                          ++|.|+ +.+++......+-.-+.-+.       +.+|.|+..++
T Consensus       131 ----ilIDDn-p~nLE~F~G~kIlFdA~HN~nenRF~Rv~~W~e~eq~l  174 (180)
T COG4502         131 ----ILIDDN-PLNLENFKGNKILFDAHHNKNENRFVRVRDWYEAEQAL  174 (180)
T ss_pred             ----EEecCC-chhhhhccCceEEEecccccCccceeeeccHHHHHHHH
Confidence                678776 78887665433322122221       56788877655

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.82  E-value=0.0032  Score=49.06  Aligned_cols=34  Identities=32%  Similarity=0.515  Sum_probs=23.4

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhc
Q 024886          147 HGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDL  180 (261)
Q Consensus       147 ~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~  180 (261)
                      +.+.+.|+.|++.|.+++++|+.+.. +..+++.+
T Consensus        20 ~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~   54 (204)
T TIGR01484        20 PETIEALERLREAGVKVVLVTGRSLAEIKELLKQL   54 (204)
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence            34556777777777888888887765 56566553

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=96.80  E-value=0.049  Score=47.79  Aligned_cols=78  Identities=9%  Similarity=0.061  Sum_probs=45.6

Q ss_pred             HHHHHHHCCCeEEEEeCCchH-HHHHHHh-cCcccccc--------eEEecCCCCCCCCCHHH-HHHHHHHcCCCCCcEE
Q 024886          152 SILLLKDAGVKVAVVSNFDTR-LRKLLKD-LNVIDLFD--------AVVISSEVGCEKPDPRI-FKAALDQMSVEASRTV  220 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~-~~~~l~~-~gl~~~f~--------~i~~~~~~~~~Kp~~~~-~~~~~~~l~~~~~~~l  220 (261)
                      ..+.++..| +++|+|.++.. ++.+++. +|.+..+.        +.++.--  .++...+. ...+.+.+|- ....+
T Consensus       101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~--~G~n~~ek~~~rl~~~~g~-~~~~v  176 (498)
T PLN02499        101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFI--RGTDVDQSVANRVANLFVD-ERPQL  176 (498)
T ss_pred             HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEE--ecCccHHHHHHHHHHHhCc-cCcee
Confidence            556666777 99999999988 7999998 77643321        1111111  12333333 5555566763 23467


Q ss_pred             EEcCCchhhhHHHH
Q 024886          221 HIGDDEKADKQGAN  234 (261)
Q Consensus       221 ~iGD~~~~Di~~a~  234 (261)
                      -+||. ..|-.-..
T Consensus       177 g~~~~-~~~~~f~~  189 (498)
T PLN02499        177 GLGRI-SASSSFLS  189 (498)
T ss_pred             cccCC-cccchhhh
Confidence            78886 55554444

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.78  E-value=0.0039  Score=59.55  Aligned_cols=112  Identities=13%  Similarity=0.155  Sum_probs=78.7

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccc--eEEecCCCC----------------CCCCCHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFD--AVVISSEVG----------------CEKPDPRI  204 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~--~i~~~~~~~----------------~~Kp~~~~  204 (261)
                      +|.+++.++++.|++.|+++.++|+.... ...+-+..|+...-+  .++.+.+..                ...-.|+=
T Consensus       547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~q  626 (917)
T COG0474         547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQ  626 (917)
T ss_pred             CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHH
Confidence            67899999999999999999999997777 789999999754332  243332211                12223333


Q ss_pred             HHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          205 FKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       205 ~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      -..+.+.++-...-+.+.||. .||+.+.+.|.++....+.|.+-.++..++
T Consensus       627 K~~IV~~lq~~g~vVamtGDG-vNDapALk~ADVGIamg~~Gtdaak~Aadi  677 (917)
T COG0474         627 KARIVEALQKSGHVVAMTGDG-VNDAPALKAADVGIAMGGEGTDAAKEAADI  677 (917)
T ss_pred             HHHHHHHHHhCCCEEEEeCCC-chhHHHHHhcCccEEecccHHHHHHhhcce
Confidence            445555555556789999998 899999999998875555564444444433

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=96.75  E-value=0.04  Score=44.48  Aligned_cols=50  Identities=14%  Similarity=0.171  Sum_probs=40.8

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCc---hH-HHHHHHhcCcccccceEEecC
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFD---TR-LRKLLKDLNVIDLFDAVVISS  193 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~---~~-~~~~l~~~gl~~~f~~i~~~~  193 (261)
                      .++|++.++++.|+++|.+++++||+.   .. +...++.+|++...+.++++.
T Consensus        17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~   70 (249)
T TIGR01457        17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTAS   70 (249)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHH
Confidence            667899999999999999999999833   33 577888899876667777763

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=96.71  E-value=0.012  Score=46.81  Aligned_cols=74  Identities=14%  Similarity=0.130  Sum_probs=48.3

Q ss_pred             CCeEEEEeCCchH-HH---HHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHh
Q 024886          160 GVKVAVVSNFDTR-LR---KLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANS  235 (261)
Q Consensus       160 g~~i~i~T~~~~~-~~---~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~  235 (261)
                      .+++++||..... ..   .-|+..|+.  +|..+.-..  ..|..      +++.++-  .  +||.|. ...++.|. 
T Consensus       186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLgG--~~K~~------vL~~~~p--h--IFFDDQ-~~H~~~a~-  249 (264)
T PF06189_consen  186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLGG--LPKGP------VLKAFRP--H--IFFDDQ-DGHLESAS-  249 (264)
T ss_pred             ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhCC--CchhH------HHHhhCC--C--EeecCc-hhhhhHhh-
Confidence            4899999986543 33   345555654  555444332  22322      4555553  3  889887 89999998 


Q ss_pred             CCCeEEEECCCCCC
Q 024886          236 LGIDCWLWGIDVKT  249 (261)
Q Consensus       236 ~G~~~i~v~~~~~~  249 (261)
                      .++++.+|+.++.+
T Consensus       250 ~~vps~hVP~gv~n  263 (264)
T PF06189_consen  250 KVVPSGHVPYGVAN  263 (264)
T ss_pred             cCCCEEeccCCcCC
Confidence            88899999888654

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.59  E-value=0.0099  Score=55.06  Aligned_cols=99  Identities=14%  Similarity=0.225  Sum_probs=68.7

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      .+.|++...++.|+..|++++++|+.+.. ++.+-+..|    ++.+++ +..+..|      ....+++.-....+.||
T Consensus       723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~a-ev~P~~K------~~~Ik~lq~~~~~VaMV  791 (951)
T KOG0207|consen  723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYA-EVLPEQK------AEKIKEIQKNGGPVAMV  791 (951)
T ss_pred             ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEe-ccCchhh------HHHHHHHHhcCCcEEEE
Confidence            45789999999999999999999997776 788889999    455553 2222222      23344444444679999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      ||. .||-.+...+.++. .++.+.+...|.++
T Consensus       792 GDG-INDaPALA~AdVGI-aig~gs~vAieaAD  822 (951)
T KOG0207|consen  792 GDG-INDAPALAQADVGI-AIGAGSDVAIEAAD  822 (951)
T ss_pred             eCC-CCccHHHHhhccce-eeccccHHHHhhCC
Confidence            998 89998888877664 44444333333333

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=96.56  E-value=0.007  Score=58.50  Aligned_cols=99  Identities=16%  Similarity=0.174  Sum_probs=68.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc------------------------ceEEecCCC---
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF------------------------DAVVISSEV---  195 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f------------------------~~i~~~~~~---  195 (261)
                      ++.|++.+.++.+++.|+++.++|+.... +..+.+..|+..--                        ..++.+.+.   
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l  647 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM  647 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence            45789999999999999999999998876 78888888873210                        012222111   


Q ss_pred             ---------------CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          196 ---------------GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       196 ---------------~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                                     -...-.|+--..+.+.+.-...-+.++||. .||+.+.+.|.++. .++
T Consensus       648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG-~ND~paLk~AdVGi-amg  709 (997)
T TIGR01106       648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDG-VNDSPALKKADIGV-AMG  709 (997)
T ss_pred             CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCC-cccHHHHhhCCcce-ecC
Confidence                           112223334444455554445679999998 89999999998776 444

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=96.54  E-value=0.0068  Score=49.43  Aligned_cols=37  Identities=24%  Similarity=0.296  Sum_probs=24.9

Q ss_pred             eCccHHHHHHHHHH-CCCeEEEEeCCchH-HHHHHHhcC
Q 024886          145 LPHGAYQSILLLKD-AGVKVAVVSNFDTR-LRKLLKDLN  181 (261)
Q Consensus       145 ~~~g~~~~l~~L~~-~g~~i~i~T~~~~~-~~~~l~~~g  181 (261)
                      +.+...+.|+.|++ .|+.++|+|+.+.. +..+++.++
T Consensus        37 i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~   75 (266)
T PRK10187         37 VPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR   75 (266)
T ss_pred             CCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence            34556677777776 57888888887765 566655444

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=96.29  E-value=0.018  Score=45.77  Aligned_cols=111  Identities=18%  Similarity=0.215  Sum_probs=59.6

Q ss_pred             CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEec----CC----CCCCCCCHHHHH---HH
Q 024886          141 EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVIS----SE----VGCEKPDPRIFK---AA  208 (261)
Q Consensus       141 ~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~----~~----~~~~Kp~~~~~~---~~  208 (261)
                      ..+.+.+|+.++++.|.++++++.|+|++-.+ +..+++..|....-=.+++-    ++    .+..-|-...|.   .+
T Consensus        87 s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~  166 (246)
T PF05822_consen   87 SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA  166 (246)
T ss_dssp             S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred             cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence            44689999999999999999999999999988 69999988643211122221    11    111122111111   11


Q ss_pred             ------HHHcCCCCCcEEEEcCCchhhhHHHHhC-CCeE-EEECCCCCChHHH
Q 024886          209 ------LDQMSVEASRTVHIGDDEKADKQGANSL-GIDC-WLWGIDVKTFSDV  253 (261)
Q Consensus       209 ------~~~l~~~~~~~l~iGD~~~~Di~~a~~~-G~~~-i~v~~~~~~~~el  253 (261)
                            .+.+. ...+++..||+ .-|+.||..+ .... +-++.=....++.
T Consensus       167 l~~~~~~~~~~-~R~NvlLlGDs-lgD~~Ma~G~~~~~~~lkIGFLn~~ve~~  217 (246)
T PF05822_consen  167 LEDSPYFKQLK-KRTNVLLLGDS-LGDLHMADGVPDEENVLKIGFLNDKVEEN  217 (246)
T ss_dssp             HTTHHHHHCTT-T--EEEEEESS-SGGGGTTTT-S--SEEEEEEEE-SSHHHH
T ss_pred             ccCchHHHHhc-cCCcEEEecCc-cCChHhhcCCCccccEEEEEecccCHHHH
Confidence                  12222 36789999999 7999999877 4433 3344444555553

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.29  E-value=0.0038  Score=45.25  Aligned_cols=96  Identities=20%  Similarity=0.157  Sum_probs=59.0

Q ss_pred             eeCccHHHHHHHHHHC-C-CeEEEEeCCc--------hH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHH-
Q 024886          144 HLPHGAYQSILLLKDA-G-VKVAVVSNFD--------TR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQ-  211 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~-g-~~i~i~T~~~--------~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~-  211 (261)
                      .++|....-++.+++. | ..+.++||+-        .+ .+.+-.+.|+.-    +  ..  ...||.  .-++.... 
T Consensus        61 ~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpV----l--RH--s~kKP~--ct~E~~~y~  130 (190)
T KOG2961|consen   61 AIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPV----L--RH--SVKKPA--CTAEEVEYH  130 (190)
T ss_pred             ccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCce----E--ee--cccCCC--ccHHHHHHH
Confidence            4445555555555553 2 6788998842        11 233333445421    1  11  123443  33333333 


Q ss_pred             cC----CCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCC
Q 024886          212 MS----VEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKT  249 (261)
Q Consensus       212 l~----~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~  249 (261)
                      +|    .+++++++|||.+-.||-+|...|.-.+|..+++..
T Consensus       131 ~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~  172 (190)
T KOG2961|consen  131 FGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRA  172 (190)
T ss_pred             hCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccccc
Confidence            34    679999999999999999999999999998888553

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=96.26  E-value=0.4  Score=37.55  Aligned_cols=39  Identities=26%  Similarity=0.268  Sum_probs=28.4

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCc
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNV  182 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl  182 (261)
                      .++.||+.+++..|... .+-+|+|.+..+ +.......|+
T Consensus        82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~  121 (315)
T COG4030          82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGV  121 (315)
T ss_pred             cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCC
Confidence            48899999999998776 666777766655 5666555554

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=96.26  E-value=0.015  Score=53.40  Aligned_cols=112  Identities=12%  Similarity=0.214  Sum_probs=77.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccc----eEEecCCCC----------------CCCCCH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFD----AVVISSEVG----------------CEKPDP  202 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~----~i~~~~~~~----------------~~Kp~~  202 (261)
                      +|.+++.+.++.+++.|+++.++|+.... ...+-++.|+-..-+    ..++..+..                ...-.|
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P  663 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEP  663 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCc
Confidence            67899999999999999999999998877 799999999754333    222221111                111122


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC-CCCCChHHHHHhh
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG-IDVKTFSDVQNRI  257 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~-~~~~~~~el~~~l  257 (261)
                      .--..+.+.|+-..+=+-|-||. .||..+.+.|.++. .++ +|.+-.+|..+++
T Consensus       664 ~HK~kIVeaLq~~geivAMTGDG-VNDApALK~AdIGI-AMG~~GTdVaKeAsDMV  717 (972)
T KOG0202|consen  664 QHKLKIVEALQSRGEVVAMTGDG-VNDAPALKKADIGI-AMGISGTDVAKEASDMV  717 (972)
T ss_pred             hhHHHHHHHHHhcCCEEEecCCC-ccchhhhhhcccce-eecCCccHhhHhhhhcE
Confidence            23344444444445668899998 89999999998776 566 7766666666555

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=96.15  E-value=0.19  Score=44.13  Aligned_cols=99  Identities=14%  Similarity=0.185  Sum_probs=77.6

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD  224 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD  224 (261)
                      -||++|=+.+|++-|++...+|+.++- ...+-...|++++...         .+  |+--..+.++.+-...=+-|.||
T Consensus       449 K~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe---------at--PEdK~~~I~~eQ~~grlVAMtGD  517 (681)
T COG2216         449 KPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE---------AT--PEDKLALIRQEQAEGRLVAMTGD  517 (681)
T ss_pred             chhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc---------CC--hHHHHHHHHHHHhcCcEEEEcCC
Confidence            689999999999999999999997766 6888888998765432         23  33555666666666777899999


Q ss_pred             CchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          225 DEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       225 ~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      . .||..+...+.... .+++|....+|..+++
T Consensus       518 G-TNDAPALAqAdVg~-AMNsGTqAAkEAaNMV  548 (681)
T COG2216         518 G-TNDAPALAQADVGV-AMNSGTQAAKEAANMV  548 (681)
T ss_pred             C-CCcchhhhhcchhh-hhccccHHHHHhhccc
Confidence            8 89999888888665 7888877777777665

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.14  E-value=0.02  Score=45.23  Aligned_cols=113  Identities=12%  Similarity=0.095  Sum_probs=69.4

Q ss_pred             CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhc-CcccccceEEec----CC----CCCCCCCHHH-----
Q 024886          140 GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDL-NVIDLFDAVVIS----SE----VGCEKPDPRI-----  204 (261)
Q Consensus       140 ~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~-gl~~~f~~i~~~----~~----~~~~Kp~~~~-----  204 (261)
                      ...+.+.+|..++++.|..+++++.|+|++-.. ++.+++.. ++-+ +-.+++.    ++    .+..+|-...     
T Consensus       134 ~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~  212 (298)
T KOG3128|consen  134 ESNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNS  212 (298)
T ss_pred             HhhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccch
Confidence            334577889999999999999999999998877 56666554 3322 2222221    11    1122222111     


Q ss_pred             --HHHHHHHc--CCCCCcEEEEcCCchhhhHHHHhC-CCeE-EEECCCCCChHHHH
Q 024886          205 --FKAALDQM--SVEASRTVHIGDDEKADKQGANSL-GIDC-WLWGIDVKTFSDVQ  254 (261)
Q Consensus       205 --~~~~~~~l--~~~~~~~l~iGD~~~~Di~~a~~~-G~~~-i~v~~~~~~~~el~  254 (261)
                        .+...+.+  .-...++++-||+ .-|+.||..+ ++.. +.++...+..+|..
T Consensus       213 ~v~~~~s~yf~~~~~~~nVillGds-igdl~ma~gv~~~~~iLkig~l~d~vee~~  267 (298)
T KOG3128|consen  213 SVLQNESEYFHQLAGRVNVILLGDS-IGDLHMADGVPRVGHILKIGYLNDSVEEAL  267 (298)
T ss_pred             HHHHhhhHHHhhccCCceEEEeccc-cccchhhcCCcccccceeeecccchHHHHH
Confidence              22222222  2346789999999 8999999876 4433 35666666666643

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=96.01  E-value=0.039  Score=49.31  Aligned_cols=82  Identities=17%  Similarity=0.289  Sum_probs=61.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ++.|++.+.++.|++.|++++++|+.... ...+-+.+|+       +       ..-.|+--..+.+.+.-....+.++
T Consensus       347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-------~~~~p~~K~~~v~~l~~~g~~v~~v  412 (499)
T TIGR01494       347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-------ARVTPEEKAALVEALQKKGRVVAMT  412 (499)
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-------eccCHHHHHHHHHHHHHCCCEEEEE
Confidence            56889999999999999999999997776 6788888886       1       1123333334444443334779999


Q ss_pred             cCCchhhhHHHHhCCCeE
Q 024886          223 GDDEKADKQGANSLGIDC  240 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~  240 (261)
                      ||. .||..+.+.++++.
T Consensus       413 GDg-~nD~~al~~Advgi  429 (499)
T TIGR01494       413 GDG-VNDAPALKKADVGI  429 (499)
T ss_pred             CCC-hhhHHHHHhCCCcc
Confidence            998 89999999887663

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>PRK10444 UMP phosphatase; Provisional

Probab=96.00  E-value=0.16  Score=40.89  Aligned_cols=49  Identities=16%  Similarity=0.160  Sum_probs=38.8

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcCcccccceEEec
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLNVIDLFDAVVIS  192 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~gl~~~f~~i~~~  192 (261)
                      .++||+.++++.|++.|.+++++||+...    ....++.+|+.--.+.++++
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts   69 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS   69 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence            77899999999999999999999997643    35566778875445666655

>PLN02423 phosphomannomutase

Probab=95.97  E-value=0.0059  Score=49.17  Aligned_cols=55  Identities=9%  Similarity=-0.130  Sum_probs=41.1

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGD----DEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD----~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      ...+-.|..+++.++     +++++++|||    + .||++|.+..|..++-|..+.++.+.+.+
T Consensus       184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~-~ND~eMl~~~~~~~~~~~~~~~~~~~~~~  242 (245)
T PLN02423        184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEG-GNDHEIFESERTIGHTVTSPDDTREQCTA  242 (245)
T ss_pred             eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCC-CCcHHHHhCCCcceEEeCCHHHHHHHHHH
Confidence            444555666666666     8999999999    6 79999999999999888665554444433

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=95.89  E-value=0.068  Score=43.36  Aligned_cols=49  Identities=27%  Similarity=0.223  Sum_probs=39.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcCcccccceEEec
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLNVIDLFDAVVIS  192 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~gl~~~f~~i~~~  192 (261)
                      .++|++.++++.|+++|++++++||++..    ....++.+|+.--.+.++++
T Consensus        21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts   73 (257)
T TIGR01458        21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP   73 (257)
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence            48899999999999999999999996532    46778888876445666654

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=95.52  E-value=0.15  Score=49.85  Aligned_cols=40  Identities=13%  Similarity=0.218  Sum_probs=35.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI  183 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~  183 (261)
                      ++.|++.+.++.|++.|+++.++|+.... ...+.+..|+.
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii  696 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV  696 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            57899999999999999999999997776 68888888874

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=95.51  E-value=0.28  Score=38.25  Aligned_cols=93  Identities=9%  Similarity=0.064  Sum_probs=47.6

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcCcccccc-eEEecCCCCCCCCCHHHHHHHHHHcC-CCCC-c
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLNVIDLFD-AVVISSEVGCEKPDPRIFKAALDQMS-VEAS-R  218 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~gl~~~f~-~i~~~~~~~~~Kp~~~~~~~~~~~l~-~~~~-~  218 (261)
                      .|-....|..+++  +...|+.-+...    ....|...|+.-... ..+..-+...+|.+  +...+++.+. .... -
T Consensus       136 lpre~aaLa~~rE--yseti~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~--Aa~~ll~~y~rl~~~r~  211 (274)
T COG3769         136 LPREQAALAMLRE--YSETIIWRSSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQ--AANWLLETYRRLGGART  211 (274)
T ss_pred             CChHHhHHHHHHH--hhhheeecccchHHHHHHHHHHhcCceEEeccceEEEeccccCccH--HHHHHHHHHHhcCceeE
Confidence            3444555655555  344444432222    366777777641111 11111222234444  4555555442 2233 4


Q ss_pred             EEEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          219 TVHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      ++-+||+ .||+.+... +..++.|+
T Consensus       212 t~~~GDg-~nD~Pl~ev-~d~AfiV~  235 (274)
T COG3769         212 TLGLGDG-PNDAPLLEV-MDYAFIVK  235 (274)
T ss_pred             EEecCCC-CCcccHHHh-hhhheeec
Confidence            8999999 799977664 44555554

>PLN02423 phosphomannomutase

Probab=95.38  E-value=0.018  Score=46.42  Aligned_cols=30  Identities=13%  Similarity=0.194  Sum_probs=20.1

Q ss_pred             cccEEE-EccCCccccccccHHHHHHHHHHH
Q 024886           49 AYDAVL-LDAGGTLLQLAEPVEETYASIARK   78 (261)
Q Consensus        49 ~~k~ii-fD~DGTL~d~~~~~~~~~~~~~~~   78 (261)
                      +++.++ |||||||++.+..+.....+++++
T Consensus         5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~   35 (245)
T PLN02423          5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKE   35 (245)
T ss_pred             ccceEEEEeccCCCcCCCCcCCHHHHHHHHH
Confidence            456555 999999999876555444444443

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=94.94  E-value=0.19  Score=40.21  Aligned_cols=83  Identities=20%  Similarity=0.230  Sum_probs=54.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCch---H-HHHHHHh-cCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDT---R-LRKLLKD-LNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~---~-~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      .++|++.++++.++++|+++.++||+..   . ....+.. +|+.-..+.++.+...        +..++.++.  +...
T Consensus        14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~~--------~~~~l~~~~--~~~~   83 (236)
T TIGR01460        14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGSV--------TKDLLRQRF--EGEK   83 (236)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHHH--------HHHHHHHhC--CCCE
Confidence            6789999999999999999999998652   2 3455555 7876556777665431        233333332  2245


Q ss_pred             EEEEcCCchhhhHHHHhCCC
Q 024886          219 TVHIGDDEKADKQGANSLGI  238 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~  238 (261)
                      ++++|..  ...+.++..|+
T Consensus        84 v~v~G~~--~~~~~l~~~g~  101 (236)
T TIGR01460        84 VYVIGVG--ELRESLEGLGF  101 (236)
T ss_pred             EEEECCH--HHHHHHHHcCC
Confidence            7777763  44555566665

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=94.79  E-value=0.16  Score=49.83  Aligned_cols=39  Identities=23%  Similarity=0.320  Sum_probs=32.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNV  182 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl  182 (261)
                      ++.||+.++++.|++.|++++++|+.... +..+.+..|+
T Consensus       631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~i  670 (1057)
T TIGR01652       631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRL  670 (1057)
T ss_pred             hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCC
Confidence            57899999999999999999999997665 5666665554

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=94.69  E-value=0.33  Score=40.07  Aligned_cols=84  Identities=19%  Similarity=0.237  Sum_probs=58.3

Q ss_pred             eeeCccHHHHHHHHHHCC-CeEEEEeCCchHH----HHHHHhcCc----------ccccceEEecCCCCCCCCCHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAG-VKVAVVSNFDTRL----RKLLKDLNV----------IDLFDAVVISSEVGCEKPDPRIFKA  207 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g-~~i~i~T~~~~~~----~~~l~~~gl----------~~~f~~i~~~~~~~~~Kp~~~~~~~  207 (261)
                      ..++||+-.+.+.|.+.| .+++.+||++-..    ++++...++          ...++.++.+....    |...+.-
T Consensus       195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~r----K~~~l~n  270 (373)
T COG4850         195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAAR----KGQSLRN  270 (373)
T ss_pred             cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhh----cccHHHH
Confidence            478999999999999887 8999999988553    444443322          23345665544322    2335665


Q ss_pred             HHHHcCCCCCcEEEEcCCchhhhHH
Q 024886          208 ALDQMSVEASRTVHIGDDEKADKQG  232 (261)
Q Consensus       208 ~~~~l~~~~~~~l~iGD~~~~Di~~  232 (261)
                      ++++++  -.+++.||||-+.|.+.
T Consensus       271 il~~~p--~~kfvLVGDsGE~DpeI  293 (373)
T COG4850         271 ILRRYP--DRKFVLVGDSGEHDPEI  293 (373)
T ss_pred             HHHhCC--CceEEEecCCCCcCHHH
Confidence            777765  46799999999999864

>PLN03017 trehalose-phosphatase

Probab=94.34  E-value=0.1  Score=44.32  Aligned_cols=58  Identities=19%  Similarity=0.183  Sum_probs=38.0

Q ss_pred             CCHHHHHHHHHHcCCCC---CcEEEEcCCchhhhHHHHhCC----CeEEEECC--C-------CCChHHHHHhhh
Q 024886          200 PDPRIFKAALDQMSVEA---SRTVHIGDDEKADKQGANSLG----IDCWLWGI--D-------VKTFSDVQNRIL  258 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~---~~~l~iGD~~~~Di~~a~~~G----~~~i~v~~--~-------~~~~~el~~~l~  258 (261)
                      .|..+.+.+++.++...   .-.+|+||+ ..|-.+.+...    -.+|.|+.  +       ..+..++.++|.
T Consensus       283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD-~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~  356 (366)
T PLN03017        283 DKGKALEFLLESLGFGNTNNVFPVYIGDD-RTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLA  356 (366)
T ss_pred             CHHHHHHHHHHhcccccCCCceEEEeCCC-CccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHH
Confidence            34556677777776542   248999999 79988877552    23567773  2       557777776663

>PLN02580 trehalose-phosphatase

Probab=94.33  E-value=0.086  Score=45.09  Aligned_cols=57  Identities=18%  Similarity=0.258  Sum_probs=40.1

Q ss_pred             CCHHHHHHHHHHcCCCCCc---EEEEcCCchhhhHHHHh-----CCCeEEEECCC---------CCChHHHHHhhh
Q 024886          200 PDPRIFKAALDQMSVEASR---TVHIGDDEKADKQGANS-----LGIDCWLWGID---------VKTFSDVQNRIL  258 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~---~l~iGD~~~~Di~~a~~-----~G~~~i~v~~~---------~~~~~el~~~l~  258 (261)
                      .|..+.+.+++.+|++..+   .++|||+ .+|..|.+.     .|+. |.|+++         ..+..++.++|.
T Consensus       301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD-~TDedmF~~L~~~~~G~~-I~Vgn~~~~t~A~y~L~dp~eV~~~L~  374 (384)
T PLN02580        301 NKGKAVEFLLESLGLSNCDDVLPIYIGDD-RTDEDAFKVLREGNRGYG-ILVSSVPKESNAFYSLRDPSEVMEFLK  374 (384)
T ss_pred             CHHHHHHHHHHhcCCCcccceeEEEECCC-chHHHHHHhhhccCCceE-EEEecCCCCccceEEcCCHHHHHHHHH
Confidence            4455677888888877653   3899999 799999986     3544 466653         556777776663

>PLN02151 trehalose-phosphatase

Probab=93.84  E-value=0.14  Score=43.30  Aligned_cols=56  Identities=18%  Similarity=0.281  Sum_probs=34.2

Q ss_pred             CHHHHHHHHHHcCCCCC---cEEEEcCCchhhhHHHHhC-----CCeEEEECC--C-------CCChHHHHHhhh
Q 024886          201 DPRIFKAALDQMSVEAS---RTVHIGDDEKADKQGANSL-----GIDCWLWGI--D-------VKTFSDVQNRIL  258 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~---~~l~iGD~~~~Di~~a~~~-----G~~~i~v~~--~-------~~~~~el~~~l~  258 (261)
                      |..+.+.+++.++....   -++|+||+ ..|-.+.+..     |+ .|.|+.  +       ..+..++.++|.
T Consensus       270 KG~Av~~Ll~~~~~~~~~~~~pvyiGDD-~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~  342 (354)
T PLN02151        270 KGKALEFLLESLGYANCTDVFPIYIGDD-RTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLE  342 (354)
T ss_pred             HHHHHHHHHHhcccccCCCCeEEEEcCC-CcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHH
Confidence            34455566666554322   27999999 7998887644     43 345652  1       556777776663

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=93.53  E-value=0.19  Score=38.41  Aligned_cols=48  Identities=21%  Similarity=0.284  Sum_probs=29.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC--cccccceEEecCC
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLN--VIDLFDAVVISSE  194 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~g--l~~~f~~i~~~~~  194 (261)
                      ...|.+.++|+.|++. +.++++-+++-.  ...+.+|  +.+.||.++.-..
T Consensus        28 ~~~~e~~~~l~~lr~~-v~ig~VggsDl~--k~~eqlG~~Vl~~fDY~F~ENG   77 (252)
T KOG3189|consen   28 KVTPEMLEFLQKLRKK-VTIGFVGGSDLS--KQQEQLGDNVLEEFDYVFSENG   77 (252)
T ss_pred             cCCHHHHHHHHHHhhh-eEEEEeecHHHH--HHHHHhchhHHhhhcccccCCC
Confidence            3445666777778777 888888776643  2233333  3455777766544

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=93.11  E-value=0.17  Score=41.00  Aligned_cols=36  Identities=17%  Similarity=0.333  Sum_probs=23.6

Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCC
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLG  237 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G  237 (261)
                      +...+.++.++.+....-+++.||+ ..|=.+...+.
T Consensus       183 KG~a~~~i~~~~~~~~~~~~~aGDD-~TDE~~F~~v~  218 (266)
T COG1877         183 KGAAIKYIMDELPFDGRFPIFAGDD-LTDEDAFAAVN  218 (266)
T ss_pred             hHHHHHHHHhcCCCCCCcceecCCC-CccHHHHHhhc
Confidence            4445666666666655568888888 57766665554

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=93.04  E-value=1  Score=31.79  Aligned_cols=81  Identities=14%  Similarity=0.107  Sum_probs=58.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH--HHHHHHhcCcc---------cccceEEecCCCCCCCCCHHHHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR--LRKLLKDLNVI---------DLFDAVVISSEVGCEKPDPRIFKAALDQ  211 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~--~~~~l~~~gl~---------~~f~~i~~~~~~~~~Kp~~~~~~~~~~~  211 (261)
                      ...|+++...|..|+++|+++.++|++...  +...|+.+.+.         ..|+.+-..+.     .+...|..+-+.
T Consensus        43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~g-----sklghfke~~n~  117 (144)
T KOG4549|consen   43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDG-----SKLGHFKEFTNN  117 (144)
T ss_pred             eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCc-----ccchhHHHHhhc
Confidence            578999999999999999999999987643  57788776543         22333333222     233467888888


Q ss_pred             cCCCCCcEEEEcCCchhh
Q 024886          212 MSVEASRTVHIGDDEKAD  229 (261)
Q Consensus       212 l~~~~~~~l~iGD~~~~D  229 (261)
                      .|+.-.+..++.|. ..+
T Consensus       118 s~~~~k~~~~fdDe-srn  134 (144)
T KOG4549|consen  118 SNSIEKNKQVFDDE-SRN  134 (144)
T ss_pred             cCcchhceeeeccc-ccC
Confidence            89988888888665 444

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=92.83  E-value=1.7  Score=35.63  Aligned_cols=87  Identities=16%  Similarity=0.214  Sum_probs=52.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-H---HHHHHhcCcccc-cceEEecCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-L---RKLLKDLNVIDL-FDAVVISSEVGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~---~~~l~~~gl~~~-f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      .+.||+.++++.|+..|..+.++||++.. .   .+..+.+|+... -+.++        -|......++-+.. .....
T Consensus        38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~--------ssa~~~a~ylk~~~-~~~k~  108 (306)
T KOG2882|consen   38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIF--------SSAYAIADYLKKRK-PFGKK  108 (306)
T ss_pred             CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCccccc--------ChHHHHHHHHHHhC-cCCCe
Confidence            78999999999999999999999997744 3   344556676531 12222        22222333333332 34456


Q ss_pred             EEEEcCCchhhhHHHHhCCCeEE
Q 024886          219 TVHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                      ++++|-.  .=-+...++|+...
T Consensus       109 Vyvig~~--gi~~eL~~aG~~~~  129 (306)
T KOG2882|consen  109 VYVIGEE--GIREELDEAGFEYF  129 (306)
T ss_pred             EEEecch--hhhHHHHHcCceee
Confidence            6666654  22345566665553

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=92.18  E-value=0.29  Score=44.07  Aligned_cols=92  Identities=18%  Similarity=0.226  Sum_probs=46.6

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCc---hH-HHHHHHhcCcc--cccc--------eEEec--CCCCCCCCC---HHHHHHH
Q 024886          148 GAYQSILLLKDAGVKVAVVSNFD---TR-LRKLLKDLNVI--DLFD--------AVVIS--SEVGCEKPD---PRIFKAA  208 (261)
Q Consensus       148 g~~~~l~~L~~~g~~i~i~T~~~---~~-~~~~l~~~gl~--~~f~--------~i~~~--~~~~~~Kp~---~~~~~~~  208 (261)
                      |+..+....+++||++..+|+..   .. -+.+|+.+.-+  ...+        .++.+  .++-..||.   ...+.-+
T Consensus       562 GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DI  641 (738)
T KOG2116|consen  562 GVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDI  641 (738)
T ss_pred             hHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHH
Confidence            45556666778888888888743   22 24455443211  1112        22211  122334553   2334445


Q ss_pred             HHHcCCCCCc-EEEEcCCchhhhHHHHhCCCeE
Q 024886          209 LDQMSVEASR-TVHIGDDEKADKQGANSLGIDC  240 (261)
Q Consensus       209 ~~~l~~~~~~-~l~iGD~~~~Di~~a~~~G~~~  240 (261)
                      .+.|.-+..- ..-||.. .+|+-.=+.+|++.
T Consensus       642 k~LF~p~~nPFYAgFGNR-~TDviSY~~VgVP~  673 (738)
T KOG2116|consen  642 KNLFPPSGNPFYAGFGNR-ITDVISYRQVGVPL  673 (738)
T ss_pred             HHhcCCCCCceeeecCCC-cccceeeeeecCCc
Confidence            5555522221 2346664 88888888888763

>PLN02580 trehalose-phosphatase

Probab=92.03  E-value=0.67  Score=39.77  Aligned_cols=34  Identities=24%  Similarity=0.386  Sum_probs=20.8

Q ss_pred             HHHHHHhcCcccccc--eEEecCCCCCCCCCHHHHHHHHH
Q 024886          173 LRKLLKDLNVIDLFD--AVVISSEVGCEKPDPRIFKAALD  210 (261)
Q Consensus       173 ~~~~l~~~gl~~~f~--~i~~~~~~~~~Kp~~~~~~~~~~  210 (261)
                      ++.+++.+|+...=+  .++..|+    ..+.++|+.+..
T Consensus       306 v~~Ll~~~g~~~~d~~~pi~iGDD----~TDedmF~~L~~  341 (384)
T PLN02580        306 VEFLLESLGLSNCDDVLPIYIGDD----RTDEDAFKVLRE  341 (384)
T ss_pred             HHHHHHhcCCCcccceeEEEECCC----chHHHHHHhhhc
Confidence            578888888753211  2454444    447778887654

>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]

Probab=91.99  E-value=3.4  Score=35.03  Aligned_cols=90  Identities=16%  Similarity=0.242  Sum_probs=60.9

Q ss_pred             CeEEEEeCCc-hH--HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCC
Q 024886          161 VKVAVVSNFD-TR--LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLG  237 (261)
Q Consensus       161 ~~i~i~T~~~-~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G  237 (261)
                      +--+++|+.. ..  ++..|-.+|-.-.++.|+++..+|    +-..|+.+.++||- .-..++|||. ...-.+|++..
T Consensus       371 cvnVlvTttqLipalaKvLL~gLg~~fpiENIYSa~kiG----KescFerI~~RFg~-K~~yvvIgdG-~eee~aAK~ln  444 (468)
T KOG3107|consen  371 CVNVLVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIG----KESCFERIQSRFGR-KVVYVVIGDG-VEEEQAAKALN  444 (468)
T ss_pred             eeEEEEeccchhHHHHHHHHHhcCCcccchhhhhhhhcc----HHHHHHHHHHHhCC-ceEEEEecCc-HHHHHHHHhhC
Confidence            3345566543 22  244444555433457888776544    44599999999998 4567889998 67788999999


Q ss_pred             CeEEEECCCCCChHHHHHhh
Q 024886          238 IDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       238 ~~~i~v~~~~~~~~el~~~l  257 (261)
                      |+++-++...+ +..|...|
T Consensus       445 ~PfwrI~~h~D-l~~l~~aL  463 (468)
T KOG3107|consen  445 MPFWRISSHSD-LDALYSAL  463 (468)
T ss_pred             CceEeeccCcc-HHHHhhhc
Confidence            99988865543 55555554

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=91.84  E-value=0.93  Score=38.67  Aligned_cols=100  Identities=17%  Similarity=0.097  Sum_probs=68.9

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCchH-HHHHH---HhcCcccccceEEecCC---------------CC-----------
Q 024886          147 HGAYQSILLLKDAGVKVAVVSNFDTR-LRKLL---KDLNVIDLFDAVVISSE---------------VG-----------  196 (261)
Q Consensus       147 ~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l---~~~gl~~~f~~i~~~~~---------------~~-----------  196 (261)
                      +....++..+++.|.+..++||++-. ....+   -..++..+|+.++....               ..           
T Consensus       201 ~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~  280 (424)
T KOG2469|consen  201 GTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTG  280 (424)
T ss_pred             CccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCC
Confidence            33445899999999999999998744 22222   22467788887766420               11           


Q ss_pred             ----CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHH-HhCCCeEEEECCC
Q 024886          197 ----CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGA-NSLGIDCWLWGID  246 (261)
Q Consensus       197 ----~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a-~~~G~~~i~v~~~  246 (261)
                          .+.+++.....++..+++...+++++||+--.||--. ++-||.+++|...
T Consensus       281 p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe  335 (424)
T KOG2469|consen  281 PLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE  335 (424)
T ss_pred             cchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehh
Confidence                2233445678888888998899999999966666544 4559988877543

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=90.74  E-value=0.93  Score=38.08  Aligned_cols=84  Identities=17%  Similarity=0.148  Sum_probs=58.2

Q ss_pred             eeCccHHHHHHHHHHC----CCeEEEEeCCc---hH-H-HHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCC
Q 024886          144 HLPHGAYQSILLLKDA----GVKVAVVSNFD---TR-L-RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSV  214 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~----g~~i~i~T~~~---~~-~-~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~  214 (261)
                      .+.|++.++++.|+..    |+++.++||..   .. . +.+.+.+|+.--.+.++.+.         .....+++.++ 
T Consensus        16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~---------~~~~~ll~~~~-   85 (321)
T TIGR01456        16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH---------SPYKSLVNKYE-   85 (321)
T ss_pred             cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh---------HHHHHHHHHcC-
Confidence            6689999999999998    99999999865   22 3 33347888764444554432         13345555553 


Q ss_pred             CCCcEEEEcCCchhhhHHHHhCCCeEE
Q 024886          215 EASRTVHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       215 ~~~~~l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                        ..++++|.+  .-.+.++..|+..+
T Consensus        86 --~~v~viG~~--~~~~~l~~~G~~~v  108 (321)
T TIGR01456        86 --KRILAVGTG--SVRGVAEGYGFQNV  108 (321)
T ss_pred             --CceEEEeCh--HHHHHHHHcCCccc
Confidence              258889876  45777888998764

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=90.63  E-value=1.7  Score=33.76  Aligned_cols=90  Identities=23%  Similarity=0.304  Sum_probs=56.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      ...||+.++++.|++++.++=.+||...+    +...|.++|+.---+.|+++        -+ +-..++++-++.|-  
T Consensus        23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~ts--------l~-aa~~~~~~~~lrP~--   91 (262)
T KOG3040|consen   23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTS--------LP-AARQYLEENQLRPY--   91 (262)
T ss_pred             ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCc--------cH-HHHHHHHhcCCCce--
Confidence            46799999999999998999999996643    45677788875333444432        22 34445556566553  


Q ss_pred             EEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          220 VHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      ++|.|+-..|.....-..-.++.++
T Consensus        92 l~v~d~a~~dF~gidTs~pn~VVig  116 (262)
T KOG3040|consen   92 LIVDDDALEDFDGIDTSDPNCVVIG  116 (262)
T ss_pred             EEEcccchhhCCCccCCCCCeEEEe
Confidence            5555554555554444433344443

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=90.44  E-value=0.049  Score=43.92  Aligned_cols=104  Identities=10%  Similarity=0.031  Sum_probs=63.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCc-ccccceEE-----ecCCCCCCCCCHHHHHHHHHHcCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNV-IDLFDAVV-----ISSEVGCEKPDPRIFKAALDQMSVE  215 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl-~~~f~~i~-----~~~~~~~~Kp~~~~~~~~~~~l~~~  215 (261)
                      +.-+|++.++|+...+. +.+.+.|++... ...++..+.- ...+...+     .....+..|.        +..+|-+
T Consensus       130 V~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKd--------ls~~~~d  200 (262)
T KOG1605|consen  130 VRKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKD--------LSVLGRD  200 (262)
T ss_pred             EEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeECCcEEEE--------cceeccC
Confidence            35679999999998777 889999987766 5777766642 11122111     1111222222        2556678


Q ss_pred             CCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          216 ASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       216 ~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ..++++|.|+ +.-..+=-+.|++.-.|-.+.. =.||.+++
T Consensus       201 L~~viIiDNs-P~sy~~~p~NgIpI~sw~~d~~-D~eLL~Ll  240 (262)
T KOG1605|consen  201 LSKVIIVDNS-PQSYRLQPENGIPIKSWFDDPT-DTELLKLL  240 (262)
T ss_pred             cccEEEEcCC-hHHhccCccCCCcccccccCCC-hHHHHHHH
Confidence            8999999776 6777777777877543333322 24454443

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=90.39  E-value=0.17  Score=43.42  Aligned_cols=43  Identities=14%  Similarity=0.176  Sum_probs=27.6

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAF   96 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   96 (261)
                      ..+.|++||||||..++     ++-++..-.|-+++..-+...|....
T Consensus       374 n~kiVVsDiDGTITkSD-----~~Ghv~~miGkdwth~gVAkLYtdI~  416 (580)
T COG5083         374 NKKIVVSDIDGTITKSD-----ALGHVKQMIGKDWTHNGVAKLYTDID  416 (580)
T ss_pred             CCcEEEEecCCcEEehh-----hHHHHHHHhccchhhcchhhhhhhhc
Confidence            46789999999999875     45555555565555444444444433

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=90.33  E-value=0.6  Score=38.15  Aligned_cols=43  Identities=23%  Similarity=0.247  Sum_probs=35.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF  186 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f  186 (261)
                      .+.+++.++++.|+++|++++++|+.+.. +...++.+|+..++
T Consensus        21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~   64 (273)
T PRK00192         21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF   64 (273)
T ss_pred             cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence            44567889999999999999999998876 78889999876443

>PLN03190 aminophospholipid translocase; Provisional

Probab=89.68  E-value=0.81  Score=45.31  Aligned_cols=35  Identities=26%  Similarity=0.280  Sum_probs=28.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLK  178 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~  178 (261)
                      ++.+|+.++++.|++.|++++++|+.... ...+-.
T Consensus       726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~  761 (1178)
T PLN03190        726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGY  761 (1178)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence            57899999999999999999999996654 444433

>CHL00162 thiG thiamin biosynthesis protein G; Validated

Probab=89.28  E-value=10  Score=30.55  Aligned_cols=101  Identities=17%  Similarity=0.171  Sum_probs=71.2

Q ss_pred             eeeCccHHHHH---HHHHHCCCeEEEEeCCchHHHHHHHhcCcccc--cceEEecCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGAYQSI---LLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDL--FDAVVISSEVGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~~~~l---~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ..++|+..+++   +.|-+.|+.+.-+++.+..+-..|+..|-...  ...-++   .+.+-.++..++.+++...++. 
T Consensus       117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLed~Gc~aVMPlgsPIG---Sg~Gl~n~~~l~~i~e~~~vpV-  192 (267)
T CHL00162        117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLEDIGCATVMPLGSPIG---SGQGLQNLLNLQIIIENAKIPV-  192 (267)
T ss_pred             cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHHcCCeEEeeccCccc---CCCCCCCHHHHHHHHHcCCCcE-
Confidence            35678777666   56678899999999988887778888874211  112222   3345668889999999877641 


Q ss_pred             cEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          218 RTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       218 ~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                       ++--|=...+|+..|-+.|...+++++++-
T Consensus       193 -ivdAGIgt~sDa~~AmElGaDgVL~nSaIa  222 (267)
T CHL00162        193 -IIDAGIGTPSEASQAMELGASGVLLNTAVA  222 (267)
T ss_pred             -EEeCCcCCHHHHHHHHHcCCCEEeecceee
Confidence             222222347999999999999999988843

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=88.89  E-value=8.7  Score=31.03  Aligned_cols=114  Identities=18%  Similarity=0.236  Sum_probs=67.2

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-hcCcccccceEEecCCCCCCCC-----------CHHHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLK-DLNVIDLFDAVVISSEVGCEKP-----------DPRIFKAALD  210 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~-~~gl~~~f~~i~~~~~~~~~Kp-----------~~~~~~~~~~  210 (261)
                      +....+..++.+.+.+.+..-.++|-+.+.+..+.. ...-...+-.+.-..+...+-|           +.+.=.++++
T Consensus       112 ~~~v~~~~eA~~~l~~~~~~~iflttGsk~L~~f~~~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al~~  191 (249)
T PF02571_consen  112 WHYVDSYEEAAELLKELGGGRIFLTTGSKNLPPFVPAPLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRALFR  191 (249)
T ss_pred             EEEeCCHHHHHHHHhhcCCCCEEEeCchhhHHHHhhcccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHHHH
Confidence            677788999999998777344444444655555543 2211122222222222111111           2234567888


Q ss_pred             HcCCCCCcEEEEcCC----chhhhHHHHhCCCeEEEECCC--------CCChHHHHHhhhc
Q 024886          211 QMSVEASRTVHIGDD----EKADKQGANSLGIDCWLWGID--------VKTFSDVQNRILI  259 (261)
Q Consensus       211 ~l~~~~~~~l~iGD~----~~~Di~~a~~~G~~~i~v~~~--------~~~~~el~~~l~~  259 (261)
                      +++++   +++-=||    ...=+++|++.|++.+.+.++        +.+++++.++|.+
T Consensus       192 ~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~~~~~~~~~~e~l~~l~~  249 (249)
T PF02571_consen  192 QYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEPYGDPVVETIEELLDWLEQ  249 (249)
T ss_pred             HcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCHHHHHHHHhC
Confidence            88875   4444333    234588999999999999877        3677788777653

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=88.55  E-value=2  Score=39.22  Aligned_cols=56  Identities=13%  Similarity=-0.000  Sum_probs=42.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCc-cccc-ceEEecCCCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNV-IDLF-DAVVISSEVGCEK  199 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl-~~~f-~~i~~~~~~~~~K  199 (261)
                      +++.|++.++|+.+.+. +.++|.|-+.+. +..+.+.+.- ..+| +.|++.++.+..|
T Consensus       200 vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde~~~~k  258 (635)
T KOG0323|consen  200 VKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDESPFFK  258 (635)
T ss_pred             EEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCccccceEEEecCCCccc
Confidence            58899999999999987 999999998877 6777776642 2455 6777777744333

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=88.53  E-value=1  Score=35.71  Aligned_cols=39  Identities=26%  Similarity=0.262  Sum_probs=33.4

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID  184 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~  184 (261)
                      .++..++++.|+++|+++.++|+.+.. +..+++.+|+..
T Consensus        17 ~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~   56 (225)
T TIGR02461        17 PGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP   56 (225)
T ss_pred             chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence            456889999999999999999998866 788899999753

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=88.30  E-value=0.51  Score=37.67  Aligned_cols=45  Identities=18%  Similarity=0.203  Sum_probs=26.6

Q ss_pred             CHHHHHHHHHHcCCC---CCcEEEEcCCchhhhHHHHhCCCe-----EEEECCC
Q 024886          201 DPRIFKAALDQMSVE---ASRTVHIGDDEKADKQGANSLGID-----CWLWGID  246 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~---~~~~l~iGD~~~~Di~~a~~~G~~-----~i~v~~~  246 (261)
                      |..+.+.+++.++..   +.-++++||+ ..|-.+.+.+.-.     .+.|+..
T Consensus       166 KG~av~~ll~~~~~~~~~~~~~l~~GDD-~tDE~~f~~~~~~~~~~~~i~V~~~  218 (235)
T PF02358_consen  166 KGSAVRRLLEELPFAGPKPDFVLYIGDD-RTDEDAFRALRELEEGGFGIKVGSV  218 (235)
T ss_dssp             HHHHHHHHHTTS---------EEEEESS-HHHHHHHHTTTTS----EEEEES--
T ss_pred             hHHHHHHHHHhcCccccccceeEEecCC-CCCHHHHHHHHhcccCCCCeEEEee
Confidence            445567777777665   6789999999 7898888876432     4556554

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>PRK08883 ribulose-phosphate 3-epimerase; Provisional

Probab=88.15  E-value=3.8  Score=32.40  Aligned_cols=98  Identities=16%  Similarity=0.236  Sum_probs=56.5

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchHH---HHHHHhcCcccccceEEecCCCCCCCCCHHHHH---HHHHHc---CCCC
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTRL---RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFK---AALDQM---SVEA  216 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~~---~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~---~~~~~l---~~~~  216 (261)
                      .+...++++.+|+.|.+.+++-|....+   ..++.....   +-........+..+--+..++   .+.+..   |.+ 
T Consensus        92 ~~~~~~~l~~ik~~g~k~GlalnP~Tp~~~i~~~l~~~D~---vlvMtV~PGfgGq~fi~~~lekI~~l~~~~~~~~~~-  167 (220)
T PRK08883         92 SEHVDRTLQLIKEHGCQAGVVLNPATPLHHLEYIMDKVDL---ILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRD-  167 (220)
T ss_pred             cccHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCe---EEEEEecCCCCCceecHhHHHHHHHHHHHHHhcCCC-
Confidence            3457789999999999999999866544   444443322   211111122222222333333   322222   211 


Q ss_pred             CcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          217 SRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       217 ~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      -.+.+.|-=...++....++|...+.+++..
T Consensus       168 ~~I~vdGGI~~eni~~l~~aGAd~vVvGSaI  198 (220)
T PRK08883        168 IRLEIDGGVKVDNIREIAEAGADMFVAGSAI  198 (220)
T ss_pred             eeEEEECCCCHHHHHHHHHcCCCEEEEeHHH
Confidence            2245566544678889999999998887773

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=87.82  E-value=0.81  Score=43.46  Aligned_cols=36  Identities=19%  Similarity=0.143  Sum_probs=24.9

Q ss_pred             eeCccHHHHHHHHHHC-CCeEEEEeCCchH-HHHHHHh
Q 024886          144 HLPHGAYQSILLLKDA-GVKVAVVSNFDTR-LRKLLKD  179 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~-g~~i~i~T~~~~~-~~~~l~~  179 (261)
                      .+.|++.++|+.|.+. +..++|+|+.+.. ++.++..
T Consensus       532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~  569 (797)
T PLN03063        532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE  569 (797)
T ss_pred             CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence            4456777788888654 5678888887766 6666654

>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism

Probab=87.44  E-value=13  Score=29.74  Aligned_cols=99  Identities=18%  Similarity=0.179  Sum_probs=67.4

Q ss_pred             eeeCccHHHHHHHHHHC---CCeEEEEeCCchHHHHHHHhcCccccc--ceEEecCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGAYQSILLLKDA---GVKVAVVSNFDTRLRKLLKDLNVIDLF--DAVVISSEVGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~---g~~i~i~T~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ..++|+..++++..+..   |+.+.-+++.+...-..+..+|-....  ...+++.   .+..+++.++.+.+..+++  
T Consensus       103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~G~~~vmPlg~pIGsg---~Gi~~~~~I~~I~e~~~vp--  177 (248)
T cd04728         103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDAGCAAVMPLGSPIGSG---QGLLNPYNLRIIIERADVP--  177 (248)
T ss_pred             cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHcCCCEeCCCCcCCCCC---CCCCCHHHHHHHHHhCCCc--
Confidence            36788888888777665   999996666666655566666643221  1333333   3444588899888875543  


Q ss_pred             cEEEEc---CCchhhhHHHHhCCCeEEEECCCCCC
Q 024886          218 RTVHIG---DDEKADKQGANSLGIDCWLWGIDVKT  249 (261)
Q Consensus       218 ~~l~iG---D~~~~Di~~a~~~G~~~i~v~~~~~~  249 (261)
                        ++++   .+ +.|+..|-+.|...+++++++..
T Consensus       178 --VI~egGI~t-peda~~AmelGAdgVlV~SAIt~  209 (248)
T cd04728         178 --VIVDAGIGT-PSDAAQAMELGADAVLLNTAIAK  209 (248)
T ss_pred             --EEEeCCCCC-HHHHHHHHHcCCCEEEEChHhcC
Confidence              4443   23 79999999999999999998665

ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=87.38  E-value=1.5  Score=42.13  Aligned_cols=38  Identities=16%  Similarity=0.198  Sum_probs=29.7

Q ss_pred             eeCccHHHHHHHHHHC-CCeEEEEeCCchH-HHHHHHhcC
Q 024886          144 HLPHGAYQSILLLKDA-GVKVAVVSNFDTR-LRKLLKDLN  181 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~-g~~i~i~T~~~~~-~~~~l~~~g  181 (261)
                      .+.|++.++|+.|.+. +..++|+|+.+.. ++.++...+
T Consensus       622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~  661 (934)
T PLN03064        622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD  661 (934)
T ss_pred             CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence            5667888999999765 6789999998877 777776543

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=87.20  E-value=1.2  Score=34.90  Aligned_cols=40  Identities=18%  Similarity=0.201  Sum_probs=34.2

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI  183 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~  183 (261)
                      .+.|...+.++.|++.|++++++|+.+.. +..+.+.+++.
T Consensus        18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~   58 (215)
T TIGR01487        18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS   58 (215)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence            56678889999999999999999998866 77788888765

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=86.69  E-value=1.3  Score=34.78  Aligned_cols=37  Identities=22%  Similarity=0.270  Sum_probs=32.2

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc
Q 024886          147 HGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI  183 (261)
Q Consensus       147 ~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~  183 (261)
                      +..+++|+.|++.|++++++|+.+.. +..+++.+++.
T Consensus        19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            34678999999999999999999877 78899999875

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PLN02334 ribulose-phosphate 3-epimerase

Probab=86.66  E-value=12  Score=29.74  Aligned_cols=97  Identities=20%  Similarity=0.131  Sum_probs=54.4

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCc--hH-HHHHHHhcCcccccceEEecCCCCCCC--CCHHHHHHHHHHcCC-CCCcEEE
Q 024886          148 GAYQSILLLKDAGVKVAVVSNFD--TR-LRKLLKDLNVIDLFDAVVISSEVGCEK--PDPRIFKAALDQMSV-EASRTVH  221 (261)
Q Consensus       148 g~~~~l~~L~~~g~~i~i~T~~~--~~-~~~~l~~~gl~~~f~~i~~~~~~~~~K--p~~~~~~~~~~~l~~-~~~~~l~  221 (261)
                      ...+.++.+++.|..+++..+..  .+ ++.++...|. +|+-.  .+-..+.+|  ..+..++.+.+--.. ..-.+++
T Consensus       103 ~~~~~~~~i~~~g~~iGls~~~~t~~~~~~~~~~~~~~-Dyi~~--~~v~pg~~~~~~~~~~~~~i~~~~~~~~~~~I~a  179 (229)
T PLN02334        103 HLHRLIQQIKSAGMKAGVVLNPGTPVEAVEPVVEKGLV-DMVLV--MSVEPGFGGQSFIPSMMDKVRALRKKYPELDIEV  179 (229)
T ss_pred             hHHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhccCC-CEEEE--EEEecCCCccccCHHHHHHHHHHHHhCCCCcEEE
Confidence            34678888899999999999742  33 3333333112 22211  111111222  233344444332221 1124667


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +|-=...++....++|...+.+++..
T Consensus       180 ~GGI~~e~i~~l~~aGad~vvvgsai  205 (229)
T PLN02334        180 DGGVGPSTIDKAAEAGANVIVAGSAV  205 (229)
T ss_pred             eCCCCHHHHHHHHHcCCCEEEEChHH
Confidence            75444899999999999999888774

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=86.53  E-value=1.4  Score=34.71  Aligned_cols=41  Identities=17%  Similarity=0.104  Sum_probs=34.3

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID  184 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~  184 (261)
                      .+.|...+.|+.|++.|++++++|+.+.. +..+++.+++..
T Consensus        20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (230)
T PRK01158         20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG   61 (230)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence            45567889999999999999999998876 677888888753

>TIGR00685 T6PP trehalose-phosphatase

Probab=86.15  E-value=0.65  Score=37.31  Aligned_cols=15  Identities=33%  Similarity=0.494  Sum_probs=12.8

Q ss_pred             ccEEEEccCCccccc
Q 024886           50 YDAVLLDAGGTLLQL   64 (261)
Q Consensus        50 ~k~iifD~DGTL~d~   64 (261)
                      ..+++||+||||.+.
T Consensus         3 ~~~l~lD~DGTL~~~   17 (244)
T TIGR00685         3 KRAFFFDYDGTLSEI   17 (244)
T ss_pred             cEEEEEecCccccCC
Confidence            468999999999874

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=85.86  E-value=2.2  Score=34.42  Aligned_cols=37  Identities=19%  Similarity=0.210  Sum_probs=32.2

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc
Q 024886          147 HGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI  183 (261)
Q Consensus       147 ~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~  183 (261)
                      +...++++.|+++|++++++|+.+.. +..+++.+|+.
T Consensus        19 ~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~   56 (256)
T TIGR01486        19 GPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE   56 (256)
T ss_pred             hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            45788999999999999999998876 78899999875

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=85.59  E-value=1.6  Score=35.56  Aligned_cols=41  Identities=12%  Similarity=0.277  Sum_probs=35.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID  184 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~  184 (261)
                      .+.+..++.++.|+++|++++++|+.+.. +..+++.+++..
T Consensus        19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   60 (272)
T PRK15126         19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA   60 (272)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence            45667889999999999999999998876 788889988753

>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences

Probab=85.51  E-value=15  Score=29.32  Aligned_cols=100  Identities=21%  Similarity=0.232  Sum_probs=61.6

Q ss_pred             eeCccHHHHH---HHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecC-CCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSI---LLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISS-EVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l---~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~-~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .++|+..+++   +.|-+.|+.+.-+++.+..+-+.|+..|-....  -.++. ..+.+--++..++.++++.+++.  +
T Consensus       104 ~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~d~GcaavM--PlgsPIGSg~Gi~n~~~l~~i~~~~~vPv--I  179 (247)
T PF05690_consen  104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEDAGCAAVM--PLGSPIGSGRGIQNPYNLRIIIERADVPV--I  179 (247)
T ss_dssp             T--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHHHTT-SEBE--EBSSSTTT---SSTHHHHHHHHHHGSSSB--E
T ss_pred             CcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHHCCCCEEE--ecccccccCcCCCCHHHHHHHHHhcCCcE--E
Confidence            5677776665   667789999999999888877788888743111  11111 23345668889999999998752  2


Q ss_pred             EEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          220 VHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +=-|=..++|...|-+.|+..+++++.+
T Consensus       180 vDAGiG~pSdaa~AMElG~daVLvNTAi  207 (247)
T PF05690_consen  180 VDAGIGTPSDAAQAMELGADAVLVNTAI  207 (247)
T ss_dssp             EES---SHHHHHHHHHTT-SEEEESHHH
T ss_pred             EeCCCCCHHHHHHHHHcCCceeehhhHH
Confidence            2112223799999999999999998763

ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=85.50  E-value=1.9  Score=34.81  Aligned_cols=40  Identities=18%  Similarity=0.414  Sum_probs=34.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI  183 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~  183 (261)
                      .+.+...++++.|+++|++++++|+.+.. +...++.+++.
T Consensus        16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   56 (256)
T TIGR00099        16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD   56 (256)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            45567889999999999999999998866 78888888875

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PRK08005 epimerase; Validated

Probab=84.87  E-value=17  Score=28.52  Aligned_cols=101  Identities=9%  Similarity=-0.011  Sum_probs=57.4

Q ss_pred             ccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE-cCC
Q 024886          147 HGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI-GDD  225 (261)
Q Consensus       147 ~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i-GD~  225 (261)
                      +...++++.+|+.|.+.+++-|....+..+...+...+++-......+.+..|=.+..++++.+.-...++.-+-| |-=
T Consensus        93 ~~~~~~l~~Ik~~G~k~GlAlnP~Tp~~~i~~~l~~vD~VlvMsV~PGf~GQ~f~~~~~~KI~~l~~~~~~~~I~VDGGI  172 (210)
T PRK08005         93 QNPSEILADIRAIGAKAGLALNPATPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFPAAECWADGGI  172 (210)
T ss_pred             cCHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHhcCEEEEEEecCCCccceecHHHHHHHHHHHHhcccCCEEEECCC
Confidence            4567899999999999999998665554443333322222222222223333334555666555333322212455 222


Q ss_pred             chhhhHHHHhCCCeEEEECCCC
Q 024886          226 EKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       226 ~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      ....+....++|...+.+++..
T Consensus       173 ~~~~i~~l~~aGad~~V~Gsai  194 (210)
T PRK08005        173 TLRAARLLAAAGAQHLVIGRAL  194 (210)
T ss_pred             CHHHHHHHHHCCCCEEEEChHh
Confidence            2456667788999988887764

>PRK10976 putative hydrolase; Provisional

Probab=84.38  E-value=2  Score=34.87  Aligned_cols=41  Identities=15%  Similarity=0.245  Sum_probs=34.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID  184 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~  184 (261)
                      .+.+...+.++.++++|++++++|+.+.. +..+++.+++..
T Consensus        19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   60 (266)
T PRK10976         19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS   60 (266)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence            45567889999999999999999998866 778888888753

>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional

Probab=84.13  E-value=23  Score=29.72  Aligned_cols=100  Identities=20%  Similarity=0.174  Sum_probs=68.4

Q ss_pred             eeeCccHHHHHHHHHHC---CCeEEEEeCCchHHHHHHHhcCcc---cccceEEecCCCCCCCCCHHHHHHHHHHcCCCC
Q 024886          143 WHLPHGAYQSILLLKDA---GVKVAVVSNFDTRLRKLLKDLNVI---DLFDAVVISSEVGCEKPDPRIFKAALDQMSVEA  216 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~---g~~i~i~T~~~~~~~~~l~~~gl~---~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~  216 (261)
                      ..++|+..++++..+..   |+.+.++++.+...-+.+..+|-.   ++ ...++   .+.+-.+|+.++.+.+...++ 
T Consensus       177 ~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~g~~avmPl-~~pIG---sg~gv~~p~~i~~~~e~~~vp-  251 (326)
T PRK11840        177 KTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDAGAVAVMPL-GAPIG---SGLGIQNPYTIRLIVEGATVP-  251 (326)
T ss_pred             CCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhcCCEEEeec-ccccc---CCCCCCCHHHHHHHHHcCCCc-
Confidence            35678888888777666   999988887777655566666631   11 22333   223344888999999986543 


Q ss_pred             CcEEEEc--CCchhhhHHHHhCCCeEEEECCCCCCh
Q 024886          217 SRTVHIG--DDEKADKQGANSLGIDCWLWGIDVKTF  250 (261)
Q Consensus       217 ~~~l~iG--D~~~~Di~~a~~~G~~~i~v~~~~~~~  250 (261)
                         +++|  =+...|+..|-+.|...+++++++...
T Consensus       252 ---VivdAGIg~~sda~~AmelGadgVL~nSaIa~a  284 (326)
T PRK11840        252 ---VLVDAGVGTASDAAVAMELGCDGVLMNTAIAEA  284 (326)
T ss_pred             ---EEEeCCCCCHHHHHHHHHcCCCEEEEcceeccC
Confidence               4442  223799999999999999999885433

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=83.90  E-value=2.2  Score=33.51  Aligned_cols=40  Identities=20%  Similarity=0.266  Sum_probs=33.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI  183 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~  183 (261)
                      .+.+...++|+.|++.|++++++|+.+.. +..+++.+|+.
T Consensus        15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~   55 (225)
T TIGR01482        15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP   55 (225)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence            45567788999999999999999998876 77788888854

catalyze the same reaction as SPP.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=83.82  E-value=2.3  Score=34.48  Aligned_cols=40  Identities=15%  Similarity=0.256  Sum_probs=34.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI  183 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~  183 (261)
                      .+.|...+.++.++++|++++++|+.+.. +..+++.+++.
T Consensus        20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (272)
T PRK10530         20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD   60 (272)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence            45667789999999999999999998866 78888888875

>PRK00208 thiG thiazole synthase; Reviewed

Probab=83.73  E-value=21  Score=28.69  Aligned_cols=99  Identities=19%  Similarity=0.187  Sum_probs=65.6

Q ss_pred             eeCccHHHHHHHHHHC---CCeEEEEeCCchHHHHHHHhcCccccc--ceEEecCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          144 HLPHGAYQSILLLKDA---GVKVAVVSNFDTRLRKLLKDLNVIDLF--DAVVISSEVGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~---g~~i~i~T~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      .++|+..++++..+..   |+.+.-+++.+...-+.+..+|-.-..  ...+++.   .+..+++.++.+.+..+++   
T Consensus       104 ~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~G~~~vmPlg~pIGsg---~gi~~~~~i~~i~e~~~vp---  177 (250)
T PRK00208        104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEAGCAAVMPLGAPIGSG---LGLLNPYNLRIIIEQADVP---  177 (250)
T ss_pred             CCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHcCCCEeCCCCcCCCCC---CCCCCHHHHHHHHHhcCCe---
Confidence            5678888887766665   999995666566555556666643221  1333333   2344577888888875543   


Q ss_pred             EEEEcC--CchhhhHHHHhCCCeEEEECCCCCC
Q 024886          219 TVHIGD--DEKADKQGANSLGIDCWLWGIDVKT  249 (261)
Q Consensus       219 ~l~iGD--~~~~Di~~a~~~G~~~i~v~~~~~~  249 (261)
                       ++++-  +.+.|+..|-+.|...+++++++..
T Consensus       178 -VIveaGI~tpeda~~AmelGAdgVlV~SAItk  209 (250)
T PRK00208        178 -VIVDAGIGTPSDAAQAMELGADAVLLNTAIAV  209 (250)
T ss_pred             -EEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence             44432  1279999999999999999998665

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=83.04  E-value=5.7  Score=33.03  Aligned_cols=85  Identities=19%  Similarity=0.204  Sum_probs=59.6

Q ss_pred             eeCccHHHHHHHHHHC----CCeEEEEeCCch--H---HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCC
Q 024886          144 HLPHGAYQSILLLKDA----GVKVAVVSNFDT--R---LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSV  214 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~----g~~i~i~T~~~~--~---~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~  214 (261)
                      .+.|++.++|+.|.++    .++...+||+..  +   .+.+-..+|..---|.++.+..         .|..+. +  .
T Consensus        51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSHs---------P~r~l~-~--~  118 (389)
T KOG1618|consen   51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSHS---------PFRLLV-E--Y  118 (389)
T ss_pred             CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhcC---------hHHHHh-h--h
Confidence            7889999999999887    689999999642  1   3455556676544455555443         344454 2  2


Q ss_pred             CCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          215 EASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       215 ~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      .-+.++++|+.  +--+.|+..|++.+.
T Consensus       119 ~~k~vLv~G~~--~vr~vAegyGFk~Vv  144 (389)
T KOG1618|consen  119 HYKRVLVVGQG--SVREVAEGYGFKNVV  144 (389)
T ss_pred             hhceEEEecCC--cHHHHhhccCcccee
Confidence            35789999975  667789999998753

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=83.02  E-value=3.2  Score=33.81  Aligned_cols=38  Identities=21%  Similarity=0.148  Sum_probs=32.6

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI  183 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~  183 (261)
                      .+..++.++.|+++|++++++|+.+.. +..+++.+|+.
T Consensus        26 ~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~   64 (271)
T PRK03669         26 WQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence            355778899999999999999998876 78899999874

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=82.88  E-value=2.6  Score=34.76  Aligned_cols=41  Identities=17%  Similarity=0.163  Sum_probs=34.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID  184 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~  184 (261)
                      ..++.+.+.|+.|+++|++++++|+.... +..+.+.+++..
T Consensus        18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~   59 (302)
T PRK12702         18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH   59 (302)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence            34556789999999999999999998866 788889998764

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=82.42  E-value=2.6  Score=34.14  Aligned_cols=41  Identities=17%  Similarity=0.310  Sum_probs=35.3

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID  184 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~  184 (261)
                      .+.+..+++|+.++++|++++++|+++.. +..+++.+++..
T Consensus        20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~   61 (264)
T COG0561          20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG   61 (264)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence            35567889999999999999999998866 899999999864

>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]

Probab=82.37  E-value=20  Score=28.46  Aligned_cols=103  Identities=19%  Similarity=0.219  Sum_probs=72.4

Q ss_pred             eeeCccHHHHH---HHHHHCCCeEEEEeCCchHHHHHHHhcCccccc--ceEEecCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGAYQSI---LLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLF--DAVVISSEVGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~~~~l---~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ..+.|+..+++   +.|-+.|+.+..+++.+..+-+.|+..|-....  ..-++   .+.+--++..++.++++..++  
T Consensus       110 ~tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLee~GcaavMPl~aPIG---Sg~G~~n~~~l~iiie~a~VP--  184 (262)
T COG2022         110 KTLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLEEAGCAAVMPLGAPIG---SGLGLQNPYNLEIIIEEADVP--  184 (262)
T ss_pred             cccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHHhcCceEecccccccc---CCcCcCCHHHHHHHHHhCCCC--
Confidence            36788877766   566778999999999888777777777732111  12222   234556888999999999875  


Q ss_pred             cEEEE--cCCchhhhHHHHhCCCeEEEECCCCCChHH
Q 024886          218 RTVHI--GDDEKADKQGANSLGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       218 ~~l~i--GD~~~~Di~~a~~~G~~~i~v~~~~~~~~e  252 (261)
                        ++|  |=..++|...|-+.|+..+++++.+....+
T Consensus       185 --viVDAGiG~pSdAa~aMElG~DaVL~NTAiA~A~D  219 (262)
T COG2022         185 --VIVDAGIGTPSDAAQAMELGADAVLLNTAIARAKD  219 (262)
T ss_pred             --EEEeCCCCChhHHHHHHhcccceeehhhHhhccCC
Confidence              333  222378999999999999999887554443

>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway

Probab=81.47  E-value=1.8  Score=36.75  Aligned_cols=46  Identities=20%  Similarity=0.107  Sum_probs=32.6

Q ss_pred             HHHHHHHHHc----CCCCCcEEEEcCCch----hhhHHHHhCCCeEEEECCCCCCh
Q 024886          203 RIFKAALDQM----SVEASRTVHIGDDEK----ADKQGANSLGIDCWLWGIDVKTF  250 (261)
Q Consensus       203 ~~~~~~~~~l----~~~~~~~l~iGD~~~----~Di~~a~~~G~~~i~v~~~~~~~  250 (261)
                      -....+.+-+    ++.++++++|||.+.    ||. .|+.+| .++|+.++.++.
T Consensus       352 ~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDf-kaR~a~-~t~WIasP~ETv  405 (408)
T PF06437_consen  352 LGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDF-KARLAC-TTAWIASPQETV  405 (408)
T ss_pred             HhHHHHHHHHHhccCCCccceeeehhhhhccCCcch-hhhhhc-eeeEecCHHHHh
Confidence            3566666666    899999999999742    665 566666 556887765543

; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=80.71  E-value=17  Score=29.29  Aligned_cols=111  Identities=16%  Similarity=0.191  Sum_probs=65.1

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCC-----CC----------C-CHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGC-----EK----------P-DPRIFK  206 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~-----~K----------p-~~~~~~  206 (261)
                      +...++..++.+.+++.|-++.+.++ .+++..+........++-.++...+...     +-          | ..+.=.
T Consensus       111 ~~~V~d~~ea~~~~~~~~~rVflt~G-~~~l~~f~~~~~~~~~~~Rvlp~~~~~~~~~~~~~p~~~Iia~~GPfs~~~n~  189 (257)
T COG2099         111 WIEVADIEEAAEAAKQLGRRVFLTTG-RQNLAHFVAADAHSHVLARVLPPPDVLAKCEDLGVPPARIIAMRGPFSEEDNK  189 (257)
T ss_pred             eEEecCHHHHHHHHhccCCcEEEecC-ccchHHHhcCcccceEEEEEcCchHHHHHHHhcCCChhhEEEecCCcChHHHH
Confidence            45567888999998888766666666 4444444444444334433333221110     11          1 112345


Q ss_pred             HHHHHcCCCCCcEEEEcCCc-----hhhhHHHHhCCCeEEEECCC------CCChHHHHHhh
Q 024886          207 AALDQMSVEASRTVHIGDDE-----KADKQGANSLGIDCWLWGID------VKTFSDVQNRI  257 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~-----~~Di~~a~~~G~~~i~v~~~------~~~~~el~~~l  257 (261)
                      .++++++++   +++-=||-     ..=+++|++.|+++|.+.++      ..++.++.+.+
T Consensus       190 all~q~~id---~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp~~~~~~~~~v~~~~~~l  248 (257)
T COG2099         190 ALLEQYRID---VVVTKNSGGAGGTYEKIEAARELGIPVIMIERPIDYPAGFGDVTDLDAAL  248 (257)
T ss_pred             HHHHHhCCC---EEEEccCCcccCcHHHHHHHHHcCCcEEEEecCCcCCcccchhhHHHHHH
Confidence            677777765   45544441     23489999999999998887      44555555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	261
3k1z_A	263	Crystal Structure Of Human Haloacid Dehalogenase-li		1e-18
2zg6_A	220	Crystal Structure Of Hypothetical Protein; Probable		2e-09
3kzx_A	231	Crystal Structure Of A Had-Superfamily Hydrolase Fr		3e-08
4ffd_A	234	Crystal Structure Of Engineered Protein. Northeast		4e-08
1x42_A	232	Crystal Structure Of A Haloacid Dehalogenase Family		9e-08
3u26_A	234	Crystal Structure Of Engineered Protein. Northeast		1e-07
2hoq_A	241	Crystal Structure Of The Probable Haloacid Dehaloge		3e-07
3ib6_A	189	Crystal Structure Of An Uncharacterized Protein Fro		1e-06
2om6_A	235	Hypothetical Protein (probable Phosphoserine Phosph		5e-06
3e58_A	214	Crystal Structure Of Putative Beta-Phosphoglucomuta		3e-05
2gfh_A	260	Crystal Structure Of A N-acetylneuraminic Acid Phos		4e-05
3vay_A	230	Crystal Structure Of 2-Haloacid Dehalogenase From P		4e-05
2w4m_A	270	The Crystal Structure Of Human N-Acetylneuraminic A		5e-05
1s8o_A	555	Human Soluble Epoxide Hydrolase Length = 555		7e-05
3qnm_A	240	Haloalkane Dehalogenase Family Member From Bacteroi		1e-04
3kbb_A	216	Crystal Structure Of Putative Beta-Phosphoglucomuta		3e-04
2nyv_A	222	X-Ray Crystal Structure Of A Phosphoglycolate Phosp		7e-04
2yy6_A	213	Crystal Structure Of The Phosphoglycolate Phosphata		8e-04
2b0c_A	206	The Crystal Structure Of The Putative Phosphatase F		8e-04
3ed5_A	238	The Crystal Structure Of Yfnb From Bacillus Subtili		8e-04
3i76_A	244	The Crystal Structure Of The Orthorhombic Form Of T		8e-04

>pdb|3K1Z|A Chain A, Crystal Structure Of Human Haloacid Dehalogenase-like Hydrolase Domain Containing 3 (hdhd3) Length = 263

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
Query: 56  DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAA---PWPE-KLRYEGDGR 111
           D   TLL+L  P+ E YA+ AR +GL V+ + +++GFR+A+ A    +P   L +    R
Sbjct: 7   DVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSR 66
Query: 112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
            +W  VV +     G  +        E++Y+ ++    W +  GA  ++   +  G+++A
Sbjct: 67  QWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLA 126
Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
           V+SNFD RL  +L  L + + FD V+ S   G  KPDPRIF+ AL     E     H+GD
Sbjct: 127 VISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHXEPVVAAHVGD 186
Query: 225 DEKADKQGANSLGIDCWL 242
           +   D QG  ++G   +L
Sbjct: 187 NYLCDYQGPRAVGXHSFL 204

>pdb|2ZG6|A Chain A, Crystal Structure Of Hypothetical Protein; Probable 2- Haloalkanoic Acid Dehalogenase From Sulfolobus Tokodaii Length = 220

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPW--------- 100
           Y AVL+D G TL+       E    + +  G ++D   + + + KA              
Sbjct: 3   YKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAXGXINYPDEDGLEH 62
Query: 101 --PEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKD 158
             P+   Y     P  RLV         D            GEA+ L     + +  LK 
Sbjct: 63  VDPKDFLYILGIYPSERLVKELKEADIRD------------GEAF-LYDDTLEFLEGLKS 109
Query: 159 AGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASR 218
            G K+A+VSN   R++ LL+  ++   FDA+ +S E+   KP+P+IF  AL ++   A  
Sbjct: 110 NGYKLALVSNASPRVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA-- 167
Query: 219 TVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI 257
            VH+GD  + D  GA    +D  L       + DV++R+
Sbjct: 168 -VHVGDIYELDYIGAKRSYVDPILLD-RYDFYPDVRDRV 204

>pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From Ehrlichia Chaffeensis At 1.9a Resolution Length = 231

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 130 FEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFD-TRLRKLLKDLNVIDLFDA 188
           +E   E   K + + L  GA + +  LK+  + +A+VSN +  RLR  +   N+   FD+
Sbjct: 89  YENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDS 148
Query: 189 VVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG---- 244
           ++ S + G  KP P    AAL  +++E S+ V    D  +D Q A   G     +G    
Sbjct: 149 IIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI 208
Query: 245 ----IDVKTFSDVQNRI 257
               +  K F D++N I
Sbjct: 209 IKDILSFKNFYDIRNFI 225

>pdb|4FFD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or48 Length = 234

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 163 VAVVSNFDT-RLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH 221
           V ++++ DT +    L  L + DLFD++  S E G  KP PRIF+ AL +  V+    V+
Sbjct: 118 VGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY 177
Query: 222 IGDDEKADKQGANSLGIDCWL 242
           +GD+   D  G+ +LG+   L
Sbjct: 178 VGDNPVKDCGGSKNLGMTSIL 198

>pdb|1X42|A Chain A, Crystal Structure Of A Haloacid Dehalogenase Family Protein (Ph0459) From Pyrococcus Horikoshii Ot3 Length = 232

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 163 VAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH 221
           V  +++ DT  L   L  L + DLFD++  S E G  KP PRIF+ AL +  V+    V+
Sbjct: 118 VGXITDSDTEYLXAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY 177
Query: 222 IGDDEKADKQGANSLGIDCWL 242
           +GD+   D  G+ +LG    L
Sbjct: 178 VGDNPVKDCGGSKNLGXTSIL 198

>pdb|3U26|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or48 Length = 234

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 163 VAVVSNFDT-RLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH 221
           V  +++ DT +    L  L + DLFD++  S E G  KP PRIF+ AL +  V+    V+
Sbjct: 118 VGXITDSDTEQAXAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY 177
Query: 222 IGDDEKADKQGANSLGIDCWL 242
           +GD+   D  G+ +LG    L
Sbjct: 178 VGDNPVKDCGGSKNLGXTSIL 198

>pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase (Ph1655) From Pyrococcus Horikoshii Ot3 Length = 241

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 148 GAYQSILLLKDAGVKVAVVS--NFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIF 205
           GA + ++ LK+ G ++ +++  N   +  K+L+ L + D F+ V+IS   G +KP P+IF
Sbjct: 98  GARKVLIRLKELGYELGIITDGNPVKQWEKILR-LELDDFFEHVIISDFEGVKKPHPKIF 156
Query: 206 KAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC 240
           K AL   +V+    + +GD   +D  GA  +G+  
Sbjct: 157 KKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKT 191

>pdb|3IB6|A Chain A, Crystal Structure Of An Uncharacterized Protein From Listeria Monocytogenes Serotype 4b Length = 189

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 19/123 (15%)
Query: 144 HLPHGAYQSILLLKDA----------GVKVAVVSNFDTR----LRKLLKDLNVIDLFDAV 189
           H P   Y  ++L K+A          G K A++SN  T     ++++L +  +ID FD +
Sbjct: 24  HHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFI 83
Query: 190 VIS-SEVG---CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC-WLWG 244
             S SE+     EKPD  IF   L+ + ++ +  V +G+  ++D  GAN  GI   WL  
Sbjct: 84  YASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQN 143
Query: 245 IDV 247
            +V
Sbjct: 144 PEV 146

>pdb|2OM6|A Chain A, Hypothetical Protein (probable Phosphoserine Phosph (ph0253) From Pyrococcus Horikoshii Ot3 Length = 235

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 147 HGAYQSILLLKDAGVKVAVVSNFD----TRLRKLLKDLNVIDLFDAVVISSEVGCEKPDP 202
            G  +++  +K+ G+K AV+ N      +  R LL+   + +  D    + EV   KP  
Sbjct: 102 EGTKEALQFVKERGLKTAVIGNVXFWPGSYTRLLLERFGLXEFIDKTFFADEVLSYKPRK 161
Query: 203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLG 237
             F+  L+   V+   ++HIGD    D QGA  +G
Sbjct: 162 EXFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVG 196

>pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 51  DAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDG 110
           +A++ D  G L    +   +  AS   + G+++D                P      G+ 
Sbjct: 6   EAIIFDXDGVLFDTEKYYYDRRASFLGQKGISIDHL--------------PPSFFIGGNT 51
Query: 111 RPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLL----KDAGVKVAVV 166
           +  W  ++ +     +    +E Y  Y +          +  +L +    K  G+++ + 
Sbjct: 52  KQVWENILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLA 111
Query: 167 SN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDD 225
           S+     + + L++  +   FD V+   E    KP+P I+  AL Q++V+ASR + I D 
Sbjct: 112 SSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDS 171
Query: 226 EKADKQGANSLGIDCWLWGIDVKTFSDVQN 255
           EK    G   +  D  +W I    F   Q+
Sbjct: 172 EKGIAAG---VAADVEVWAIRDNEFGXDQS 198

>pdb|2GFH|A Chain A, Crystal Structure Of A N-acetylneuraminic Acid Phosphatase (nanp) From Mus Musculus At 1.90 A Resolution Length = 260

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 3/133 (2%)
Query: 114 WRLVVSEATG-CTNDDYFEEVYEYYAKGEAWHLPHGA-YQSILLLKDAGVKVAVVSNFDT 171
           W   + E  G   N    EE Y  +      H+      +++L      V++ +++N D 
Sbjct: 88  WEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDR 147
Query: 172 RL-RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK 230
           +  R+ ++       FDA+VI  E   EKP P IF    D + V+    V +GD  + D 
Sbjct: 148 QTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDI 207
Query: 231 QGANSLGIDCWLW 243
           QG  + G+   +W
Sbjct: 208 QGGLNAGLKATVW 220

>pdb|3VAY|A Chain A, Crystal Structure Of 2-Haloacid Dehalogenase From Pseudomonas Syringae Pv. Tomato Dc3000 Length = 230

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 131 EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVV 190
           +E +E +  G          Q  L +      + V++N +  +R+L     + D F   +
Sbjct: 91  DESFEVFLHGRHQVQIFPEVQPTLEILAKTFTLGVITNGNADVRRL----GLADYFAFAL 146
Query: 191 ISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGI 238
            + ++G  KPDP  F  AL +  V+AS  VH+GD    D  GA   G+
Sbjct: 147 CAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGM 194

>pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid Phosphatase, Nanp Length = 270

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 3/133 (2%)
Query: 114 WRLVVSEATG-CTNDDYFEEVYEYYAKGEAWHLPHGA-YQSILLLKDAGVKVAVVSNFDT 171
           W   + E  G   N    EE Y  +      H+      +++L      V++ +++N D 
Sbjct: 98  WEEAIQETKGGAANRKLAEECYFLWKSTRLQHMTLAEDVKAMLTELRKEVRLLLLTNGDR 157
Query: 172 RL-RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK 230
           +  R+ ++       FDAVV+  E   EKP P IF    + + V+    V +GD  + D 
Sbjct: 158 QTQREKIEACACQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPGDCVMVGDTLETDI 217
Query: 231 QGANSLGIDCWLW 243
           QG  + G+   +W
Sbjct: 218 QGGLNAGLKATVW 230

>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase Length = 555

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 151 QSILLLKDAGVKVAVVSN--FDTR-----LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR 203
           Q+ L+L+  G   A+++N   D R     L +L+ +L +   FD ++ S +VG  KP+P+
Sbjct: 107 QAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM--HFDFLIESCQVGMVKPEPQ 164
Query: 204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGI 238
           I+K  LD +    S  V + DD  A+ + A  LG+
Sbjct: 165 IYKFLLDTLKASPSEVVFL-DDIGANLKPARDLGM 198

>pdb|3QNM|A Chain A, Haloalkane Dehalogenase Family Member From Bacteroides Thetaiotaomicron Of Unknown Function Length = 240

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 186 FDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGI 245
           F  +++S ++G  KP P IF  AL     E   ++ IGD  +AD  GA+ +G     + +
Sbjct: 149 FKKIILSEDLGVLKPRPEIFHFALSATQSELRESLXIGDSWEADITGAHGVGXHQAFYNV 208
Query: 246 DVKTFSDVQ 254
             +T    Q
Sbjct: 209 TERTVFPFQ 217

>pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 51  DAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDG 110
           +AV+ D  G L        E Y  +A  YG                  P+ E L     G
Sbjct: 2   EAVIFDXDGVLXDTEPLYFEAYRRVAESYG-----------------KPYTEDLHRRIXG 44
Query: 111 RPFWR--LVVSEATGCTN--DDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVA 164
            P      ++ EA    +  +++ + V+E   +   E      G  +++  +K   +K+A
Sbjct: 45  VPEREGLPILXEALEIKDSLENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLA 104
Query: 165 VVSNFDTRLRKLLKDLNVIDL---FDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH 221
           + ++  T  R+ L+ L  +DL   FD  V   +V   KPDP I+   L++++V   + V 
Sbjct: 105 LATS--TPQREALERLRRLDLEKYFDVXVFGDQVKNGKPDPEIYLLVLERLNVVPEKVV- 161
Query: 222 IGDDEKADKQGANSLGIDCWLWGIDVKTFSD 252
           + +D K+  + A S GI+  ++G+ V + +D
Sbjct: 162 VFEDSKSGVEAAKSAGIE-RIYGV-VHSLND 190

>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 156 LKDAGVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSV 214
           LK  G K+AVVSN  +   +K+L  LN+   FD +V     G +KP P      L+ +  
Sbjct: 95  LKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGE 154
Query: 215 EASRTVHIGD---DEKADKQGANSLGIDCW 241
           E  + + +GD   D +A K+      +  W
Sbjct: 155 EPEKALIVGDTDADIEAGKRAGTKTALALW 184

>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From Aquifex Aeolicus Vf5 Length = 213

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 156 LKDAGVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSV 214
           LK  G K+AVVSN  +   +K+L  LN+   FD +V     G +KP P      L+ +  
Sbjct: 93  LKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGE 152
Query: 215 EASRTVHIGD---DEKADKQGANSLGIDCW 241
           E  + + +GD   D +A K+      +  W
Sbjct: 153 EPEKALIVGDTDADIEAGKRAGTKTALALW 182

>pdb|2B0C|A Chain A, The Crystal Structure Of The Putative Phosphatase From Escherichia Coli Length = 206

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 156 LKDAGVKVAVVSNFDTRLRKLL---KDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQM 212
           L++ G +V V+SN   RL       +   + D  D + +S ++G  KP+ RI++  L   
Sbjct: 103 LREQGHRVVVLSN-TNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAE 161
Query: 213 SVEASRTVHIGDDEKADKQGANSLGIDCWL 242
               S TV   DD   + +GAN LGI   L
Sbjct: 162 GFSPSDTVFF-DDNADNIEGANQLGITSIL 190

>pdb|3ED5|A Chain A, The Crystal Structure Of Yfnb From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 238

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 141 EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKP 200
           E   L  GA+  I  L+       V +       K L+D  +   F  + +S + G +KP
Sbjct: 100 EGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKP 159
Query: 201 DPRIFKAALDQM-SVEASRTVHIGDDEKADKQGANSLGID-CW 241
               F    +++    A  T+ IGD   AD +G    G+D CW
Sbjct: 160 XKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCW 202

>pdb|3I76|A Chain A, The Crystal Structure Of The Orthorhombic Form Of The Putative Had- Hydrolase Yfnb From Bacillus Subtilis Bound To Magnesium Reveals Interdomain Movement Length = 244

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 141 EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKP 200
           E   L  GA+  I  L+       V +       K L+D  +   F  + +S + G +KP
Sbjct: 99  EGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKP 158
Query: 201 DPRIFKAALDQM-SVEASRTVHIGDDEKADKQGANSLGID-CWL 242
               F    +++    A  T+ IGD   AD +G    G+D CW+
Sbjct: 159 MKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWM 202

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	261
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	7e-62
2zg6_A	220	Putative uncharacterized protein ST2620, probable	2e-57
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	4e-47
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	1e-35
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	4e-33
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	6e-33
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	1e-32
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	2e-30
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	2e-30
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	8e-27
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	2e-26
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	1e-25
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	2e-21
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	7e-20
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	3e-19
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	5e-19
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	2e-17
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	2e-17
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	2e-17
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	3e-17
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	5e-17
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	8e-17
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	1e-16
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	2e-16
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	3e-16
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	1e-15
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	5e-14
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	1e-13
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	1e-13
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	1e-13
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	2e-13
2hsz_A	243	Novel predicted phosphatase; structural genomics,	5e-13
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	1e-12
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	4e-12
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	4e-12
1te2_A	226	Putative phosphatase; structural genomics, phospha	6e-12
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	6e-12
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	6e-12
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	8e-12
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	9e-12
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	1e-11
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	1e-11
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	1e-11
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	2e-11
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	5e-11
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	6e-11
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	7e-11
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	1e-10
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	2e-09
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	1e-08
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	2e-08
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	3e-08
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	3e-07
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	4e-07
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	2e-06
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	4e-06
2o2x_A	218	Hypothetical protein; structural genomics, joint c	1e-05
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	1e-05
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	2e-05
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	3e-05
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score =  194 bits (495), Expect = 7e-62
 Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 11/203 (5%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAA---PWPEK-LRYE 107
            +  D   TLL+L  P+ E YA+ AR +GL V+ + +++GFR+A+ A    +P   L + 
Sbjct: 3   LLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHG 62

Query: 108 GDGRPFWRLVVSEATGCTN-------DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAG 160
              R +W  VV +                 E++Y+ ++    W +  GA  ++   +  G
Sbjct: 63  LTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRG 122

Query: 161 VKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV 220
           +++AV+SNFD RL  +L  L + + FD V+ S   G  KPDPRIF+ AL    +E     
Sbjct: 123 LRLAVISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAA 182

Query: 221 HIGDDEKADKQGANSLGIDCWLW 243
           H+GD+   D QG  ++G+  +L 
Sbjct: 183 HVGDNYLCDYQGPRAVGMHSFLV 205

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score =  182 bits (463), Expect = 2e-57
 Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 11/197 (5%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPW---PEKLRY 106
           Y AVL+D G TL+       E    + +  G ++D   + + + KA         + L +
Sbjct: 3   YKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEH 62

Query: 107 EGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVV 166
                  + L +  +     +   +E+ E   +     L     + +  LK  G K+A+V
Sbjct: 63  VDPKDFLYILGIYPS-----ERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALV 117

Query: 167 SNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDE 226
           SN   R++ LL+  ++   FDA+ +S E+   KP+P+IF  AL ++   A   VH+GD  
Sbjct: 118 SNASPRVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA---VHVGDIY 174

Query: 227 KADKQGANSLGIDCWLW 243
           + D  GA    +D  L 
Sbjct: 175 ELDYIGAKRSYVDPILL 191

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score =  156 bits (395), Expect = 4e-47
 Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 10/203 (4%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE 107
           +    V  D   TLL L   ++E    +A+  GL++   D+     +        + +  
Sbjct: 2   REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIK--DVANAVIEVRNEIKKMRAQAS 59

Query: 108 GDGRPFWRLVVS---EATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
            D R                  +             +   +  G  +++  +K+ G+K A
Sbjct: 60  EDPRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTA 119

Query: 165 VVSNF----DTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV 220
           V+ N      +  R LL+   +++  D    + EV   KP   +F+  L+   V+   ++
Sbjct: 120 VIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESL 179

Query: 221 HIGDDEKADKQGANSLGID-CWL 242
           HIGD    D QGA  +G+   W+
Sbjct: 180 HIGDTYAEDYQGARKVGMWAVWI 202

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score =  126 bits (319), Expect = 1e-35
 Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 12/220 (5%)

Query: 34  SSMPLHSGVGKSVKKAYDAVLLDAGGTLLQ----LAEPVEETYASIARKYGLNVDSADIK 89
           S    H      + +   AV  D   TL+         + E    +  KY    ++  I 
Sbjct: 3   SDKIHHHHHHMGLSR-VRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIIC 61

Query: 90  KGFRKAFAAPWPEKLRYEGDG--RPFWRLVVSEATGCTNDDYF-EEVYEYY--AKGEAWH 144
              +   +                  W   + E  G  ++    EE Y  +   + +   
Sbjct: 62  DKVQVKLSKECFHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMI 121

Query: 145 LPHGAYQSILLLKDAGVKVAVVSNFDTRL-RKLLKDLNVIDLFDAVVISSEVGCEKPDPR 203
           L       +  L+   V++ +++N D +  R+ ++       FDA+VI  E   EKP P 
Sbjct: 122 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPS 180

Query: 204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLW 243
           IF    D + V+    V +GD  + D QG  + G+   +W
Sbjct: 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVW 220

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score =  119 bits (301), Expect = 4e-33
 Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 14/200 (7%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKY---GLNVDSADIKKGFRKAFAAPWPEKLRY 106
              +  D   TL+  ++  E    +        GL VD         +           Y
Sbjct: 2   VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIK-------EY 54

Query: 107 EGDGRPFWRLVVSEATGCTNDDYFEEVYEYY--AKGEAWHLPHGAYQSILLLKDAGVKVA 164
             +    +  ++       N  +       Y   K        GA + ++ LK+ G ++ 
Sbjct: 55  GSNFPYHFDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELG 114

Query: 165 VVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIG 223
           ++++    +  + +  L + D F+ V+IS   G +KP P+IFK AL   +V+    + +G
Sbjct: 115 IITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVG 174

Query: 224 DDEKADKQGANSLGID-CWL 242
           D   +D  GA  +G+   W 
Sbjct: 175 DRLYSDIYGAKRVGMKTVWF 194

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score =  119 bits (299), Expect = 6e-33
 Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 7/197 (3%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYG-LNVDSADIKKGFRKAFAAPWPEKLRYE-GD 109
           AV  D+ GTL  +    +     +    G   ++   +   + K     +          
Sbjct: 4   AVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRP 63

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYY--AKGEAWHLPHGAYQSILLLKDAGVKVAVVS 167
            R     V+ +        Y E  +E           L     + +  LK     V +++
Sbjct: 64  LRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSLKG-KYHVGMIT 122

Query: 168 N-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDE 226
           +    +    L  L + DLFD++  S E G  KP PRIF+ AL +  V+    V++GD+ 
Sbjct: 123 DSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNP 182

Query: 227 KADKQGANSLGID-CWL 242
             D  G+ +LG+    L
Sbjct: 183 VKDCGGSKNLGMTSILL 199

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score =  118 bits (297), Expect = 1e-32
 Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 23/212 (10%)

Query: 47  KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADI---KKGFRKAFAAPWP-- 101
              Y  +  D   T+   +    +T+  + +KY  +            +++     W   
Sbjct: 2   SLKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEY 61

Query: 102 -------EKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAK--GEAWHLPHGAYQS 152
                  E+L  +    P       +A G  ++   E   E +         L   A + 
Sbjct: 62  GEGKVTKEELNRQRFFYPL------QAVGVEDEALAERFSEDFFAIIPTKSGLMPHAKEV 115

Query: 153 ILLLKDAGVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQ 211
           +  L      + ++SN F     + ++   V   F  +++S ++G  KP P IF  AL  
Sbjct: 116 LEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSA 174

Query: 212 MSVEASRTVHIGDDEKADKQGANSLGID-CWL 242
              E   ++ IGD  +AD  GA+ +G+   + 
Sbjct: 175 TQSELRESLMIGDSWEADITGAHGVGMHQAFY 206

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score =  112 bits (283), Expect = 2e-30
 Identities = 41/206 (19%), Positives = 73/206 (35%), Gaps = 18/206 (8%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSAD------IKKGFRKAFAA--P 99
           K Y  +L D   T+L            +     + + +        I +G  +AF     
Sbjct: 5   KRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKM 64

Query: 100 WPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDA 159
             +++                     +    E+ Y  +   E   L  GA+  I  L+  
Sbjct: 65  TRDEVVNTRFSALLKEYGYEA-----DGALLEQKYRRF-LEEGHQLIDGAFDLISNLQ-Q 117

Query: 160 GVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMS-VEAS 217
              + +V+N       K L+D  +   F  + +S + G +KP    F    +++    A 
Sbjct: 118 QFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAE 177

Query: 218 RTVHIGDDEKADKQGANSLGID-CWL 242
            T+ IGD   AD +G    G+D CW+
Sbjct: 178 HTLIIGDSLTADIKGGQLAGLDTCWM 203

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score =  111 bits (279), Expect = 2e-30
 Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 15/153 (9%)

Query: 114 WRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR- 172
               ++       D +  + Y          L   A +++  +K  G K A++SN  T  
Sbjct: 10  MGETLNTVPNTRYDHHPLDTYPE------VVLRKNAKETLEKVKQLGFKQAILSNTATSD 63

Query: 173 ---LRKLLKDLNVIDLFDAVVISS----EVGCEKPDPRIFKAALDQMSVEASRTVHIGDD 225
              ++++L +  +ID FD +  S+        EKPD  IF   L+ + ++ +  V +G+ 
Sbjct: 64  TEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNT 123

Query: 226 EKADKQGANSLGID-CWLWGIDVKTFSDVQNRI 257
            ++D  GAN  GI   WL   +V    +    +
Sbjct: 124 FESDIIGANRAGIHAIWLQNPEVCLQDERLPLV 156

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score =  102 bits (255), Expect = 8e-27
 Identities = 38/197 (19%), Positives = 65/197 (32%), Gaps = 15/197 (7%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE 107
               A+  D GG LL       E  A +A+++GL+ D       F +      PE     
Sbjct: 2   MTIKALFWDIGGVLLTN-GWDREQRADVAQRFGLDTDD------FTERHRLAAPELELGR 54

Query: 108 GDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVS 167
                +   VV        D   E+        E              L     ++  ++
Sbjct: 55  MTLAEYLEQVVFYQP---RDFTPEDFRAVME--EQSQPRPEVLALARDLG-QRYRMYSLN 108

Query: 168 NFDTRL-RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDE 226
           N    L    ++   + +   A   SS +G  KP+P +++  L    V     V + DD 
Sbjct: 109 NEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMV-DDR 167

Query: 227 KADKQGANSLGIDCWLW 243
             + Q A ++G+     
Sbjct: 168 LQNVQAARAVGMHAVQC 184

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 99.4 bits (248), Expect = 2e-26
 Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 3/123 (2%)

Query: 135 EYYAKGEAWHLP-HGAYQSILLLKDAGVKVAVVSNFDTRL-RKLLKDLNVIDLFDAVVIS 192
           +Y    +            +   K  GV   ++SN    L    +++L    + D V++S
Sbjct: 8   DYAGVLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLS 67

Query: 193 SEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSD 252
            E+G EKP+   F+AA D + +     V + DD   + +GA   G+    +    +   +
Sbjct: 68  GELGVEKPEEAAFQAAADAIDLPMRDCVLV-DDSILNVRGAVEAGLVGVYYQQFDRAVVE 126

Query: 253 VQN 255
           +  
Sbjct: 127 IVG 129

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 98.9 bits (247), Expect = 1e-25
 Identities = 40/203 (19%), Positives = 74/203 (36%), Gaps = 21/203 (10%)

Query: 47  KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRY 106
           K+A    + D G  ++ +         + +    + + S       +K+F        ++
Sbjct: 4   KEAKMLYIFDLGNVIVDI--DFNRVLGAWSDLTRIPLAS------LKKSFHM-GEAFHQH 54

Query: 107 EGDGRP----FWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVK 162
           E  G      F   +  E         +E+    +       L       +  L++ G +
Sbjct: 55  E-RGEISDEAFAEALCHE---MALPLSYEQFSHGWQA-VFVALRPEVIAIMHKLREQGHR 109

Query: 163 VAVVSNFDTRLRKLLKD--LNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV 220
           V V+SN +        +    + D  D + +S ++G  KP+ RI++  L       S TV
Sbjct: 110 VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 169

Query: 221 HIGDDEKADKQGANSLGIDCWLW 243
              DD   + +GAN LGI   L 
Sbjct: 170 FF-DDNADNIEGANQLGITSILV 191

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240

 Score = 88.7 bits (220), Expect = 2e-21
 Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 21/206 (10%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE 107
             + A+  D  GTL+     +      +A++ G    S ++ + F +  +       + E
Sbjct: 4   TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESP-----QQTE 58

Query: 108 GDGRPFWRLV------VSEATGCTNDD-YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAG 160
             G  +  ++      +++  G   D    EE         A+  P    +++  LK   
Sbjct: 59  TPGALYQDILRAVYDRIAKEWGLEPDAAEREEFGTSVKNWPAF--P-DTVEALQYLK-KH 114

Query: 161 VKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFK---AALDQMSVEAS 217
            K+ ++SN D    KL     +   FD ++ + +VG  KP+P  F     AL +  +E  
Sbjct: 115 YKLVILSNIDRNEFKLSNA-KLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKK 173

Query: 218 RTVHIGDDEKADKQGANSLGID-CWL 242
             +H  +    D   AN  G+   W+
Sbjct: 174 DILHTAESLYHDHIPANDAGLVSAWI 199

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 84.0 bits (208), Expect = 7e-20
 Identities = 37/202 (18%), Positives = 64/202 (31%), Gaps = 21/202 (10%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKL-RYEG 108
              ++ D GG L+ L    EE+           +  ADI++             L     
Sbjct: 5   IRNIVFDLGGVLIHL--NREESIRRFKA-----IGVADIEEMLDPYLQKGLFLDLESGRK 57

Query: 109 DGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSN 168
               F   + S   G       ++VY+                  +       ++ ++SN
Sbjct: 58  SEEEFRTEL-SRYIGKELTY--QQVYDALL--GFLEEISAEKFDYIDSLRPDYRLFLLSN 112

Query: 169 FD-------TRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH 221
            +          R L     +   FD V  S ++G  KP+  IF   +    ++   T+ 
Sbjct: 113 TNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLF 172

Query: 222 IGDDEKADKQGANSLGIDCWLW 243
           I DD  A+   A  LG   +  
Sbjct: 173 I-DDGPANVATAERLGFHTYCP 193

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 82.6 bits (204), Expect = 3e-19
 Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 21/204 (10%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKL-RY 106
           K    +L+D GG L+ L    E    +  +     +   +I++ F          +  + 
Sbjct: 26  KGIKNLLIDLGGVLINL--DRERCIENFKK-----IGFQNIEEKFCTHQLDGIFLQQEKG 78

Query: 107 EGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVV 166
                 F   +              +     A              +LL       V ++
Sbjct: 79  LITPAEFRDGIREMM-----GKMVSDKQIDAAWNSFLVDIPTYKLDLLLKLREKYVVYLL 133

Query: 167 SNFD-------TRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT 219
           SN +        +     +   V D F+   +S E+   KP+P IFKA  +   ++   T
Sbjct: 134 SNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKET 193

Query: 220 VHIGDDEKADKQGANSLGIDCWLW 243
             I DD + + + A  LGI  +  
Sbjct: 194 FFI-DDSEINCKVAQELGISTYTP 216

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234

 Score = 82.2 bits (203), Expect = 5e-19
 Identities = 37/206 (17%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 47  KKAYDAVLLDAGGTLL---QLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEK 103
           K+    +  DA  TL       + VE+ Y  + + YG    S +I     +       + 
Sbjct: 5   KELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYG---TSKEISAALFQTEMNNL-QI 60

Query: 104 LRYEGDGRPF--WRLVVSEATGCTNDDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDA 159
           L Y             +  + G    D   ++ +           L  G  +++  LK+ 
Sbjct: 61  LGYGAKAFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKET 120

Query: 160 G-VKVAVVSNFDTRL-RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEAS 217
           G  K+ V +  D       L+   +   FD + + S+        + +   L  + +  S
Sbjct: 121 GKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMSD-----KTEKEYLRLLSILQIAPS 175

Query: 218 RTVHIGDDEKADKQGANSLGID-CWL 242
             + +G+  K+D Q   SLG     +
Sbjct: 176 ELLMVGNSFKSDIQPVLSLGGYGVHI 201

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 77.6 bits (192), Expect = 2e-17
 Identities = 36/220 (16%), Positives = 66/220 (30%), Gaps = 62/220 (28%)

Query: 50  YDAVL--LDAGGTLLQLAEPVEETYASIA-------RKYGLNVDSAD-----IKKGFRKA 95
             A +  LD  GTLL       ++Y +I         ++ +  D         K   +  
Sbjct: 4   KTAFIWDLD--GTLL-------DSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDL 54

Query: 96  FAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILL 155
                 ++                        +   +V                 Q +L+
Sbjct: 55  LVRVAEDRNLDV--------------------EVLNQVRAQSLA-------EKNAQVVLM 87

Query: 156 ---------LKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFK 206
                      ++G++  + ++       +LKDL V   F  ++ S      KP P    
Sbjct: 88  PGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESYFTEILTSQSGFVRKPSPEAAT 147

Query: 207 AALDQMSVEASRTVHIGDDEKADKQGANSLGIDCW--LWG 244
             LD+  + +  T +IGD    D + A + GI     L  
Sbjct: 148 YLLDKYQLNSDNTYYIGDRT-LDVEFAQNSGIQSINFLES 186

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 76.8 bits (190), Expect = 2e-17
 Identities = 41/213 (19%), Positives = 69/213 (32%), Gaps = 55/213 (25%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIA-------RKYGLNVDSAD----IKKGFRKAFAA 98
           Y   + D GGTLL       + Y +           YG+  D       +K     A   
Sbjct: 6   YHDYIWDLGGTLL-------DNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIET 58

Query: 99  PWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPH-----GAYQSI 153
             P                             E   E Y + EA  L H     G    +
Sbjct: 59  FAPN---------------------------LENFLEKYKENEARELEHPILFEGVSDLL 91

Query: 154 LLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMS 213
             + + G +  +VS+ + ++ ++L+  ++   F  VV SS     KP+P       ++  
Sbjct: 92  EDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQ 151

Query: 214 VEASRTVHIGDDEKADKQGANSLGIDCWL--WG 244
           +     + IGD    D +   + G+D  L    
Sbjct: 152 IS--SGLVIGDRP-IDIEAGQAAGLDTHLFTSI 181

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 77.7 bits (192), Expect = 2e-17
 Identities = 36/203 (17%), Positives = 58/203 (28%), Gaps = 27/203 (13%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE 107
           +   + + D  GTL          +        + +    I                R  
Sbjct: 4   RPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRI---------------HRKI 48

Query: 108 GDGRPFWRLVVSEATGCTNDD--------YFEEVYEYYAKGEAWHLPHGAYQSILLLKDA 159
           G         +S  TG +  D           + YE         LP GA + +  L   
Sbjct: 49  GMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAYERLQHQIIA-LP-GAVELLETLDKE 106

Query: 160 GVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASR 218
            +K  + ++         LK L +      +V   +V   KPDP +F AA  ++      
Sbjct: 107 NLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDE 166

Query: 219 TVHIGDDEKADKQGANSLGIDCW 241
            + IGD    D   A        
Sbjct: 167 CLVIGDAI-WDMLAARRCKATGV 188

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 77.3 bits (191), Expect = 3e-17
 Identities = 44/219 (20%), Positives = 74/219 (33%), Gaps = 52/219 (23%)

Query: 47  KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSA-DIKKGFRKAFAA----PWP 101
           KK Y+ VL D  GTL                      D    I K  + +  +       
Sbjct: 26  KKNYEIVLFDLDGTL---------------------TDPKEGITKSIQYSLNSFGIKEDL 64

Query: 102 EKLRYEGDGRPFWRLVVSEATGCTNDDYFE--EVY-EYYAKGEAWHLPHGAYQSIL---- 154
           E L     G P       E     +    E  E Y EY+A         G +++ +    
Sbjct: 65  ENLDQ-FIGPPLHDTF-KEYYKFEDKKAKEAVEKYREYFAD-------KGIFENKIYENM 115

Query: 155 -----LLKDAGVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAA 208
                +L   G  + V ++        +L+  ++   F  +  S+  G       + +  
Sbjct: 116 KEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYV 175

Query: 209 LDQMSV-EASRTVHIGDDEKADKQGANSLGIDCW--LWG 244
           LD  +V +  + + +GD +  D  GA  +GID    L+G
Sbjct: 176 LDLCNVKDKDKVIMVGDRK-YDIIGAKKIGIDSIGVLYG 213

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 76.5 bits (189), Expect = 5e-17
 Identities = 39/214 (18%), Positives = 74/214 (34%), Gaps = 44/214 (20%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSA-DIKKGFRKAFAA---PWPEK 103
             Y+ VL D  GTL                      DSA  I K  + +         + 
Sbjct: 2   SLYNYVLFDLDGTL---------------------TDSAEGITKSVKYSLNKFDIQVEDL 40

Query: 104 LRYEGD-GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSIL-------- 154
                  G P       E     +++      +YY     +    G +++ +        
Sbjct: 41  SSLNKFVGPPLKTSF-MEYYN-FDEETATVAIDYY---RDYFKAKGMFENKVYDGIEALL 95

Query: 155 -LLKDAGVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQM 212
             LKD G  + V ++      +++L+   +   FDA+V SS  G       + + A++ +
Sbjct: 96  SSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESL 155

Query: 213 SVEASRTVHIGDDEKADKQGANSLGIDCW--LWG 244
           ++++   + IGD  + D  GA    +      +G
Sbjct: 156 NIKSDDAIMIGDR-EYDVIGALKNNLPSIGVTYG 188

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240

 Score = 76.5 bits (188), Expect = 8e-17
 Identities = 45/210 (21%), Positives = 82/210 (39%), Gaps = 33/210 (15%)

Query: 44  KSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEK 103
             +  +  A + DA GTLL +   V       A + G + +          A +  W ++
Sbjct: 8   DKLVDSLRACVFDAYGTLLDVHSAVMR----NADEVGASAE----------ALSMLWRQR 53

Query: 104 -LRYE------GDGRPFWRLV------VSEATGCTN-DDYFEEVYEYYAKGEAWHLPHGA 149
            L Y            FW+L               +     + +   Y +  A+     A
Sbjct: 54  QLEYSWTRTLMHQYADFWQLTDEALTFALRTYHLEDRKGLKDRLMSAYKELSAYP---DA 110

Query: 150 YQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAA 208
            +++  LK AG  VA++SN +   L+  LK   +  + D+ + + ++   KPDPRI++ A
Sbjct: 111 AETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFA 170

Query: 209 LDQMSVEASRTVHIGDDEKADKQGANSLGI 238
            D++ V  +    +  +   D  GA   G 
Sbjct: 171 CDRLGVNPNEVCFVSSNAW-DLGGAGKFGF 199

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 75.8 bits (187), Expect = 1e-16
 Identities = 50/209 (23%), Positives = 77/209 (36%), Gaps = 39/209 (18%)

Query: 48  KAYDAVLLDAGGTLL----QLAEPVEETYASIARKYGLNVDSAD------IKKGFRKAFA 97
           K   AV+ D   TL+     +      T+  +  + G      D      I K       
Sbjct: 23  KQPTAVIFDWYNTLIDTSINIDR---TTFYQVLDQMGYKNIDLDSIPNSTIPKYLITLLG 79

Query: 98  APWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLK 157
             W E             L             +E   E   K + + L  GA + +  LK
Sbjct: 80  KRWKE----------ATIL-------------YENSLEKSQKSDNFMLNDGAIELLDTLK 116

Query: 158 DAGVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEA 216
           +  + +A+VSN    RLR  +   N+   FD+++ S + G  KP P    AAL  +++E 
Sbjct: 117 ENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEP 176

Query: 217 SR-TVHIGDDEKADKQGANSLGIDCWLWG 244
           S+    IGD   +D Q A   G     +G
Sbjct: 177 SKEVFFIGDSI-SDIQSAIEAGCLPIKYG 204

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232

 Score = 74.9 bits (184), Expect = 2e-16
 Identities = 36/208 (17%), Positives = 71/208 (34%), Gaps = 34/208 (16%)

Query: 51  DAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEK-LRYE-- 107
             +  D  GTL  +   V     +   +               +  +A W +K L Y   
Sbjct: 5   KGIAFDLYGTLFDVHSVVGRCDEAFPGRG--------------REISALWRQKQLEYTWL 50

Query: 108 ----GDGRPFWRL-------VVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLL 156
                    F +                 +      + + Y +   +        S+  L
Sbjct: 51  RSLMNRYVNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFS---EVPDSLREL 107

Query: 157 KDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVE 215
           K  G+K+A++SN   + +  ++    + D FD ++    V   KPD R+++ A   + ++
Sbjct: 108 KRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLD 167

Query: 216 ASRTVHIGDDEKADKQGANSLGID-CWL 242
            S  + +  +   D  GA   G   CW+
Sbjct: 168 RSAILFVASN-AWDATGARYFGFPTCWI 194

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 74.5 bits (184), Expect = 3e-16
 Identities = 40/211 (18%), Positives = 68/211 (32%), Gaps = 41/211 (19%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSA-DIKKGFRKAFAA---PWP--EK 103
           Y   L D   TL                      DS+  I   FR             + 
Sbjct: 6   YTVYLFDFDYTL---------------------ADSSRGIVTCFRSVLERHGYTGITDDM 44

Query: 104 LRYE-GDGRPFWRLVVSEATGCTNDDYFEEVY----EYYAKGEAWHLP--HGAYQSILLL 156
           ++   G          S  TG T+ D  E       +        +         ++  L
Sbjct: 45  IKRTIGKTL---EESFSILTGITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHL 101

Query: 157 KDAGVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVE 215
           K  G+++ ++S  +  R+   L++    D FD ++   +V   KPDP     A+D++   
Sbjct: 102 KKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKAC 161

Query: 216 ASRTVHIGDDEKADKQGANSLGIDCW--LWG 244
               ++IGD    D   A + G+       G
Sbjct: 162 PEEVLYIGDST-VDAGTAAAAGVSFTGVTSG 191

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 73.1 bits (179), Expect = 1e-15
 Identities = 28/208 (13%), Positives = 67/208 (32%), Gaps = 14/208 (6%)

Query: 40  SGVGKSVKKAYDAVLLDAGGTLL---QLAEPVEETYASIARKYGLNVDSADIKKGFRKAF 96
           + + +   +A   V  D   TL          E  + +I   Y L++  + +++      
Sbjct: 3   TPIAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGY-LDLGDSRMQQHLLAVE 61

Query: 97  AAPWPE-KLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAK--GEAWHLPHGAYQSI 153
                      +G         +            + + E           +  G  +  
Sbjct: 62  RRNLKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGV-REA 120

Query: 154 LLLKDAGVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQM 212
           +    A   V +++        + ++   + DLF  + + S     + DP+ +   L + 
Sbjct: 121 VAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVS-----EKDPQTYARVLSEF 175

Query: 213 SVEASRTVHIGDDEKADKQGANSLGIDC 240
            + A R V IG+  ++D +   ++G   
Sbjct: 176 DLPAERFVMIGNSLRSDVEPVLAIGGWG 203

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score = 68.5 bits (168), Expect = 5e-14
 Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 29/193 (15%)

Query: 43  GKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPE 102
           G  ++K   AVL D  G L        E +  + + +GL++   +               
Sbjct: 17  GSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAY------------- 63

Query: 103 KLRYEG-DGRPFWRLVVSEATGCTND--------DYFEEVYEYYAKGEAWHLPHGAYQSI 153
              +EG  G     +V     G                 ++  Y + E   +P GA++ +
Sbjct: 64  --MHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILFNSYPEAER--MP-GAWELL 118

Query: 154 LLLKDAGVKVAVVSNFDTR--LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQ 211
             +K  G+   VV+       L +L  +   +   + +V + +V   KP+P  +  AL +
Sbjct: 119 QKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKK 178

Query: 212 MSVEASRTVHIGD 224
             ++A   V I +
Sbjct: 179 GGLKADEAVVIEN 191

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 67.6 bits (166), Expect = 1e-13
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 6/123 (4%)

Query: 127 DDYFEEVYEYYAKGEAWH--LPHGAYQSILLLKDAGVKVAVVSNFDTRL-RKLLKDLNVI 183
           ++Y E   ++Y +    +         ++  LK  G K+AVVSN    L +K+L  LN+ 
Sbjct: 64  EEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123

Query: 184 DLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL- 242
             FD +V     G +KP P      L+ +  E  + + +GD + AD +     G    L 
Sbjct: 124 GYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTD-ADIEAGKRAGTKTALA 182

Query: 243 -WG 244
            WG
Sbjct: 183 LWG 185

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 47/224 (20%), Positives = 72/224 (32%), Gaps = 45/224 (20%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIA-------RKYGLN--VDSADIK----KGFRKAF 96
           Y A + D  GT+L       +T A +         + G        DIK     G   A 
Sbjct: 4   YKAAIFDMDGTIL-------DTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAV 56

Query: 97  AAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVY----EYYAKGEAWHLPHGAYQS 152
                 +     +    +     +            V      YYA        H   ++
Sbjct: 57  TRALAYEAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYAD-------HCQIKT 109

Query: 153 IL---------LLKDAGVKVAVVSNFDTRL-RKLLKDLNVIDLFDAVVISSEVGCEKPDP 202
                       L+  GVK+AVVSN      + L+++L     FD  +        KP P
Sbjct: 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEEL-FPGSFDFALGEKSGIRRKPAP 168

Query: 203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL--WG 244
            +    +  + V   + V+IGD E  D Q A +  +D     WG
Sbjct: 169 DMTSECVKVLGVPRDKCVYIGDSE-IDIQTARNSEMDEIAVNWG 211

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253

 Score = 67.6 bits (165), Expect = 1e-13
 Identities = 42/202 (20%), Positives = 71/202 (35%), Gaps = 35/202 (17%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEK-LRYE--- 107
           AV+ DA GTL  +    +       R Y    +               W +K L Y    
Sbjct: 4   AVVFDAYGTLFDVQSVADA----TERAYPGRGE----------YITQVWRQKQLEYSWLR 49

Query: 108 ---GDGRPFWRLV------VSEATGCTNDDYF-EEVYEYYAKGEAWHLPHGAYQSILLLK 157
              G    FW +            G   D+ F  ++ + Y +   +     A Q +  L 
Sbjct: 50  ALMGRYADFWSVTREALAYTLGTLGLEPDESFLADMAQAYNRLTPYP---DAAQCLAELA 106

Query: 158 DAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEA 216
              +K A++SN     L+ L+ +  + D FDAV+        KP P  +    + + V  
Sbjct: 107 P--LKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTP 164

Query: 217 SRTVHIGDDEKADKQGANSLGI 238
           +  + +  +   D  GA + G 
Sbjct: 165 AEVLFVSSN-GFDVGGAKNFGF 185

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 66.4 bits (163), Expect = 2e-13
 Identities = 44/217 (20%), Positives = 71/217 (32%), Gaps = 55/217 (25%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSA-DIKKGFRKAFAA---PWPEK 103
            +  A+  D  GTL                     VDS+  I   F   F     P P+ 
Sbjct: 2   TSITAIFFDLDGTL---------------------VDSSIGIHNAFTYTFKELGVPSPDA 40

Query: 104 LRYE---GDGRP--FWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSIL---- 154
                  G      F   +        + D   E  + Y    +++   G Y++ L    
Sbjct: 41  KTIRGFMGPPLESSFATCL--------SKDQISEAVQIY---RSYYKAKGIYEAQLFPQI 89

Query: 155 --LLKD--AGVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
             LL++  +   + + +    +  + + K+L +   FD +  SS     K D      AL
Sbjct: 90  IDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADV--IHQAL 147

Query: 210 DQMSVEASRTVHIGDDEKADKQGANSLGIDCW--LWG 244
               +   + + IG D K D  GA   GI      WG
Sbjct: 148 QTHQLAPEQAIIIG-DTKFDMLGARETGIQKLAITWG 183

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score = 65.7 bits (161), Expect = 5e-13
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 20/130 (15%)

Query: 127 DDYFEEVYEYYAKGEAWHLPHGAYQSIL---------LLKDAGVKVAVVSNFDTRL-RKL 176
             +  +   YY +       +    S L          LK  G  +AVV+N  T+  + +
Sbjct: 95  KYFKRQFGFYYGE-------NLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPI 147

Query: 177 LKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSL 236
           L    +  LF  ++    +   KP P  F     +  +   + + +GD +  D   A+S 
Sbjct: 148 LTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQ-NDIFAAHSA 206

Query: 237 GIDCWL--WG 244
           G       +G
Sbjct: 207 GCAVVGLTYG 216

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555

 Score = 66.5 bits (162), Expect = 1e-12
 Identities = 48/217 (22%), Positives = 70/217 (32%), Gaps = 43/217 (19%)

Query: 49  AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGF-RKAFAAPWPEKLRYE 107
              A + D  G L      V            L        +G    AF           
Sbjct: 2   TLRAAVFDLDGVLA--LPAVFGVLGRTEEALAL-------PRGLLNDAFQK--------G 44

Query: 108 GDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAY----------------- 150
           G      RL+  E T        EE     ++     LP                     
Sbjct: 45  GPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRP 104

Query: 151 --QSILLLKDAGVKVAVVSN---FDTRLRKLLKDLNVID--LFDAVVISSEVGCEKPDPR 203
             Q+ L+L+  G   A+++N    D   R  L  L       FD ++ S +VG  KP+P+
Sbjct: 105 MLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQ 164

Query: 204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC 240
           I+K  LD +    S  V + DD  A+ + A  LG+  
Sbjct: 165 IYKFLLDTLKASPSEVVFL-DDIGANLKPARDLGMVT 200

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score = 63.5 bits (155), Expect = 4e-12
 Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 23/185 (12%)

Query: 47  KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRY 106
              +DAVL D  G L++    + + + S+  + GL++D  +I   F              
Sbjct: 25  DAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYF-------------- 70

Query: 107 EGDGRPF--WRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPH--GAYQSILLLKDAGVK 162
              G+ F      +++         F +V E         +    GA +++  L+ AGV 
Sbjct: 71  --TGQRFDGVLAYLAQQHDFVPPPDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVP 128

Query: 163 VAVVSN-FDTRLRKLLKDLNVIDLFDAVVISS--EVGCEKPDPRIFKAALDQMSVEASRT 219
            A+ SN    RL   L+   + +L    +       G  KP P ++  A  Q+ +   R 
Sbjct: 129 FAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERC 188

Query: 220 VHIGD 224
           V I D
Sbjct: 189 VVIED 193

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score = 63.0 bits (154), Expect = 4e-12
 Identities = 36/175 (20%), Positives = 63/175 (36%), Gaps = 14/175 (8%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGF----RKAFAAPWPEKLR 105
           + AVL D  G +   AE     + ++A + G+N       +      R+       +   
Sbjct: 2   FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLAD 61

Query: 106 YEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAV 165
            +     F  L              +   +         +  G  Q +  L+   +K+A+
Sbjct: 62  KKVSAEEFKELA---------KRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIAL 112

Query: 166 VSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV 220
            S        LL+ +N+   FDA+   +EV   KP P IF AA   + V  S ++
Sbjct: 113 ASA-SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI 166

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score = 62.6 bits (153), Expect = 6e-12
 Identities = 28/181 (15%), Positives = 61/181 (33%), Gaps = 18/181 (9%)

Query: 45  SVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGF----RKAFAAPW 100
           S  +   A + D  G L+      +     +    G+++   +                W
Sbjct: 4   STPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLW 63

Query: 101 PEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAG 160
             +  + G  R               +           +     LP G  +++ L K+ G
Sbjct: 64  YARQPWNGPSRQEVV-----------ERVIARAISLVEETRPL-LP-GVREAVALCKEQG 110

Query: 161 VKVAVVSNFDTRL-RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT 219
           + V + S     +  K+L   ++ D FDA+  + ++   KP P+++     ++ V+    
Sbjct: 111 LLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTC 170

Query: 220 V 220
           V
Sbjct: 171 V 171

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 62.2 bits (152), Expect = 6e-12
 Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 46/211 (21%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSA-DIKKGFRKAFA----APWP-EK 103
           Y A++ D  GTL                      +S        R+  A       P + 
Sbjct: 4   YQALMFDIDGTL---------------------TNSQPAYTTVMREVLATYGKPFSPAQA 42

Query: 104 LRYE-GDG-RPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPH-----GAYQSILLL 156
            +       +    L ++ +     D +  +  +  A     H        G       L
Sbjct: 43  QKTFPMAAEQAMTELGIAASEF---DHFQAQYEDVMAS----HYDQIELYPGITSLFEQL 95

Query: 157 KDAGVKVAVVSN-FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVE 215
             + +++ +V++     L   ++    +      + + +    KPDP     AL++++V 
Sbjct: 96  P-SELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVA 154

Query: 216 ASRTVHIGDDEKADKQGANSLGIDCWL--WG 244
               + IGD   +D+Q A +  +D  L  WG
Sbjct: 155 PQNALFIGDSV-SDEQTAQAANVDFGLAVWG 184

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score = 62.7 bits (153), Expect = 6e-12
 Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 5/172 (2%)

Query: 49  AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEG 108
           +  AV+ D  G +   AE     +  IA +  +  D    ++    +        L + G
Sbjct: 1   SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGG 60

Query: 109 DGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSN 168
               +      E     N DY        +K     L  G  + +  LK+  +K+ + S+
Sbjct: 61  AETKYTNAEKQELMHRKNRDY----QMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASS 116

Query: 169 FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV 220
                 K+L+ L +ID F A+V  + +   KPDP IF  A   + V  +   
Sbjct: 117 -SRNAPKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCA 167

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234

 Score = 62.4 bits (152), Expect = 8e-12
 Identities = 30/185 (16%), Positives = 53/185 (28%), Gaps = 24/185 (12%)

Query: 83  VDSA-DIKKGFRKAFAA-----PWPEKLRYEG--DGRPFWRLVVSEATGCT-NDDYFEEV 133
           +      ++    A               + G  DG   + ++ +         D F++ 
Sbjct: 16  LKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKA 75

Query: 134 YEYYAKGEAWHLPH-------GAYQSILLLKDAG-VKVAVV-SNFDTRLRKLLKDLNVID 184
            E Y                 G  + +  L     V + ++  NF+   R  LK   +  
Sbjct: 76  KETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 135

Query: 185 LFDAVVISSEVGCEKPDPRIFKAALDQMS---VEASRTVHIGDDEKADKQGANSLGIDCW 241
            F     + +       P I      +M+      S+ V IGD E  D + A  L     
Sbjct: 136 YFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEH-DIRCARELDARSI 194

Query: 242 --LWG 244
               G
Sbjct: 195 AVATG 199

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250

 Score = 62.4 bits (152), Expect = 9e-12
 Identities = 36/198 (18%), Positives = 63/198 (31%), Gaps = 31/198 (15%)

Query: 28  SNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSAD 87
           +  L   SM           +    ++ D  G LL         +  I  +Y        
Sbjct: 15  TENLYFQSMAAP-------PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYS--- 64

Query: 88  IKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG--CTNDDYFEEVYEYYAK--GEAW 143
                       W  K    G        ++ +      + ++  EE      +    A 
Sbjct: 65  ------------WDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAA 112

Query: 144 HLPHGAYQSILLLKDAGVKVAVVSNFDTRL--RKLLKDLNVIDLFDAVVISS--EVGCEK 199
            +P GA + I+ L+  G+  A+ ++  +     K  +      LF  +V+    EV   K
Sbjct: 113 LMP-GAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGK 171

Query: 200 PDPRIFKAALDQMSVEAS 217
           PDP IF A   + S   +
Sbjct: 172 PDPDIFLACAKRFSPPPA 189

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 13/175 (7%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIK--KGF-RKAFAAPWPEKLRY 106
              V+ D  G +   A    + +  IA + G+++D+   +  KG  R        +    
Sbjct: 5   LQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGK 64

Query: 107 EGDGRPFWRLVVSEATGCTNDDYFEEVY-EYYAKGEAWHLPHGAYQSILLLKDAGVKVAV 165
           EGD         +             +Y     +     +  G    +  L+   + V +
Sbjct: 65  EGD--------FNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGL 116

Query: 166 VSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV 220
            S        +L  L + + F     +S++   KPDP IF AA   + V     +
Sbjct: 117 ASV-SLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACI 170

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 61.5 bits (150), Expect = 1e-11
 Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 7/120 (5%)

Query: 131 EEVYEYYAKGEAWHLP--HGAYQSILLLKDAGVKVAVVSN-FDTRLRKLLKDLNVIDLFD 187
                 + +  A       GA + +  L   G ++ +++          L+ + + D F 
Sbjct: 55  HAWLLEHERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFA 114

Query: 188 AVVISS-EVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL--WG 244
              +   +    KP P       +   V  SR V +GD    D     + G    L    
Sbjct: 115 EADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYR-FDLDCGRAAGTRTVLVNLP 173

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 11/177 (6%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
             AVL D  G L        E++  I +++G  +   +          A     +     
Sbjct: 23  LKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYM-HEGRTGASTINIVSRRER 81

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNF 169
           G        +E           E +    K E   +P GA + +  +K  G+   VV+  
Sbjct: 82  GHDA-----TEEEIKAIYQAKTEEFNKCPKAER--MP-GALEVLTKIKSEGLTPMVVTGS 133

Query: 170 DTR--LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
                L +L  +   I   + +V + +V   KP+P  +  AL +   + +  + I +
Sbjct: 134 GQTSLLDRLNHNFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIEN 190

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score = 60.3 bits (146), Expect = 5e-11
 Identities = 28/200 (14%), Positives = 60/200 (30%), Gaps = 17/200 (8%)

Query: 52  AVLLDAGGTLLQLAEPVE-ETYASIARKYGLNVDSADIKKGF--------RKAFAAPWPE 102
           A++LD  GT +          +  + ++ G+ V  A+ ++          R+        
Sbjct: 16  ALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIA 75

Query: 103 KLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVK 162
                  G+       +E       D F  +        +  +P G  +    L   G+K
Sbjct: 76  NAWLSIKGQAS-----NEEDIKRLYDLFAPIQTRIVAQRSQLIP-GWKEVFDKLIAQGIK 129

Query: 163 VAVVSNFDTR-LRKLLKDLNVID-LFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV 220
           V   + +    +   L           + V +++V   +P P +      ++ V      
Sbjct: 130 VGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGC 189

Query: 221 HIGDDEKADKQGANSLGIDC 240
              DD     +     G+  
Sbjct: 190 IKVDDTLPGIEEGLRAGMWT 209

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score = 59.6 bits (145), Expect = 6e-11
 Identities = 31/183 (16%), Positives = 61/183 (33%), Gaps = 30/183 (16%)

Query: 48  KAYDAVLLDAGGTLLQLAEPV-EETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRY 106
             +D ++ D  G L+  +E +  +  + +  + G  +   ++ + F              
Sbjct: 2   SGFDLIIFDCDGVLV-DSEIIAAQVESRLLTEAGYPISVEEMGERFA------------- 47

Query: 107 EGDGRPF---WRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLP--HGAYQSILLLKDAGV 161
              G  +      V SEA+   +    ++  +         +    G       L     
Sbjct: 48  ---GMTWKNILLQVESEASIPLSASLLDKSEKLLDMRLERDVKIIDGVKF---ALSRLTT 101

Query: 162 KVAVVSNFD-TRLRKLLKDLNVIDLFDAVVISSE-VGCE--KPDPRIFKAALDQMSVEAS 217
              + SN    RL  +L  + +   F   + S++ +G +  KP P IF     Q  V   
Sbjct: 102 PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPD 161

Query: 218 RTV 220
           R V
Sbjct: 162 RVV 164

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score = 59.9 bits (145), Expect = 7e-11
 Identities = 29/193 (15%), Positives = 67/193 (34%), Gaps = 20/193 (10%)

Query: 47  KKAYDAVLLDAGGTLL--QLAEPVEETYASIARKYGLNVDSADIKKG--------FRKAF 96
           +   +AV+    GT +      P+E  +  I  K G+ + + + +K          R   
Sbjct: 3   RMKIEAVIFAWAGTTVDYGCFAPLE-VFMEIFHKRGVAITAEEARKPMGLLKIDHVRALT 61

Query: 97  AAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLL 156
             P           +      + E       + FEE+        A  +  G  + I  L
Sbjct: 62  EMPRIASEWNRVFRQLPTEADIQEMY-----EEFEEILFAILPRYASPIN-GVKEVIASL 115

Query: 157 KDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISS-EVGCEKPDPRIFKAALDQMSV 214
           ++ G+K+   + +    +  + K+  +       +++  +V   +P P +      ++ V
Sbjct: 116 RERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGV 175

Query: 215 E-ASRTVHIGDDE 226
              +  + +GD  
Sbjct: 176 YPMNHMIKVGDTV 188

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score = 58.7 bits (143), Expect = 1e-10
 Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 11/171 (6%)

Query: 51  DAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDG 110
           +A++ D  G L    +   +  AS   + G+++D               W   LR E D 
Sbjct: 6   EAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDK 65

Query: 111 RPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVS-NF 169
                L          ++Y           +    P    + +  +K  G+++ + S + 
Sbjct: 66  WDVSTLQ---------EEYNTYKQNNPLPYKELIFP-DVLKVLNEVKSQGLEIGLASSSV 115

Query: 170 DTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV 220
              + + L++  +   FD V+   E    KP+P I+  AL Q++V+ASR +
Sbjct: 116 KADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL 166

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 29/196 (14%)

Query: 30  RLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIK 89
            ++  +MPL +   K +    +A L D  GT++     +   +    +            
Sbjct: 18  NIQTIAMPLTT---KPLSLKINAALFDVDGTIIISQPAIAAFWRDFGKDKPY-------- 66

Query: 90  KGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYFEE----VYEYYAKGEAWHL 145
                       E + +   G   +  +   A    +++Y  +    + E Y +     +
Sbjct: 67  ---------FDAEHVIHISHGWRTYDAIAKFAPDFADEEYVNKLEGEIPEKYGEHSIE-V 116

Query: 146 PHGAYQSILLLKDAG-VKVAVVSNFDTRL-RKLLKDLNVIDLFDAVVISSEVGCEKPDPR 203
           P GA +    L      K AV ++    + +K    L  I   +  + +++V   KP P 
Sbjct: 117 P-GAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILK-IKRPEYFITANDVKQGKPHPE 174

Query: 204 IFKAALDQMSVEASRT 219
            +    + +    +  
Sbjct: 175 PYLKGRNGLGFPINEQ 190

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201

 Score = 52.9 bits (127), Expect = 1e-08
 Identities = 25/163 (15%), Positives = 58/163 (35%), Gaps = 25/163 (15%)

Query: 95  AFAAPWPEK-LRYE------GDGRPFWRLV------VSEATGCTNDDYFEEVYEYYAKGE 141
                +  K L Y       G    F  +       + +  G   +  F+E    +   +
Sbjct: 17  TVIQEFRNKQLEYTWLLTIMGKYVEFEEITKITLRYILKVRG--EESKFDEELNKWKNLK 74

Query: 142 AWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKP 200
           A+       +    + +   +V  +SN     +++ L+   ++  F  +  +  V   KP
Sbjct: 75  AYEDTKYLKE----ISEIA-EVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKP 129

Query: 201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGID-CWL 242
            P+++K  LD +  +      +  +   D  GA + G+   ++
Sbjct: 130 SPKVYKYFLDSIGAK--EAFLVSSNA-FDVIGAKNAGMRSIFV 169

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 53.3 bits (127), Expect = 2e-08
 Identities = 33/220 (15%), Positives = 59/220 (26%), Gaps = 40/220 (18%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
               L       +               +  ++  +    KG     A    ++  Y G 
Sbjct: 130 EQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEW-YLGS 188

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPH-GAYQSILLLKDAGVKVAVVSN 168
                     +         F+  Y Y    E    P       +  LK AG ++ + + 
Sbjct: 189 KL------YEDVEKKIARTTFKTGYIY---QEIILRPVDEVKVLLNDLKGAGFELGIATG 239

Query: 169 FDTR-LRKLLKDLNVIDLFDA--VVISSEV-----------GCEKPDPRIFKAAL----- 209
                     ++L ++  F+A  +  +S+V              KP+P  + AAL     
Sbjct: 240 RPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNR 299

Query: 210 ---------DQMSVEASRTVHIGDDEKADKQGANSLGIDC 240
                        V       +GD   AD   A  +G   
Sbjct: 300 DKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATF 338

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196

 Score = 51.9 bits (124), Expect = 3e-08
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 8/130 (6%)

Query: 117 VVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKL 176
           ++   +GC  D   +         E   L  GA  ++  L+D G+  A +      L   
Sbjct: 9   LLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTP 68

Query: 177 LKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT-VHIGDDEKADKQGANS 235
           L       + D ++ +       P P     AL  ++V      V I  D +  + G N+
Sbjct: 69  LAA----PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNA 124

Query: 236 LGIDCWLWGI 245
                W  G+
Sbjct: 125 ---GLWTIGL 131

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score = 49.8 bits (118), Expect = 3e-07
 Identities = 20/208 (9%), Positives = 58/208 (27%), Gaps = 24/208 (11%)

Query: 50  YDAVLLDAGGTLLQLAEPVEET-----YASIARKYGLNVDSAD--IKKGFRKAFAAPWPE 102
                 D    L + +  + +               L+ + A       +++   A    
Sbjct: 57  LKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL 116

Query: 103 KLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVK 162
            + ++ +   + R               ++        +           +         
Sbjct: 117 VMFHKVNALEYNR-------------LVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKL 163

Query: 163 VAVVSNFDTRLRKLLKDLNVIDLFDAVVI----SSEVGCEKPDPRIFKAALDQMSVEASR 218
               + +     + L+ L + DLFD +       ++    KP  + F+ A+ +  +    
Sbjct: 164 WLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYE 223

Query: 219 TVHIGDDEKADKQGANSLGIDCWLWGID 246
             +  DD   + +    LG+   +  ++
Sbjct: 224 NAYFIDDSGKNIETGIKLGMKTCIHLVE 251

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 24/133 (18%)

Query: 131 EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSN--------FD--------TRLR 174
           ++   +    + W    G+ Q+I  L  A   V + +N        FD         ++ 
Sbjct: 14  QDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMH 73

Query: 175 KLLKDLNVIDLFDAVVIS---SEVGCE--KPDPRIFKAALDQMSVEASRTVHIGDDEKAD 229
           + L  +  +   DA+ +     + GC   KP P +++    +  V+ +    +GD    D
Sbjct: 74  RALAQMGGV--VDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSL-RD 130

Query: 230 KQGANSLGIDCWL 242
            Q A   G   WL
Sbjct: 131 LQAAAQAGCAPWL 143

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* Length = 176

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 25/150 (16%)

Query: 131 EEVYEYYAKG-EAWHLPHGAYQSILLLKDAGVKVAVVSN--------FD--------TRL 173
           E   ++     +      G    +L L+ AG K+ +++N        F           +
Sbjct: 28  EPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLM 87

Query: 174 RKLLKDLNVIDLFDAVVIS---SEVGCE--KPDPRIFKAALDQMSVEASRTVHIGDDEKA 228
            ++     V   FD V+I        C+  KP  ++ +  L + +++ + +  IGD    
Sbjct: 88  MQIFTSQGVQ--FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRAT- 144

Query: 229 DKQGANSLGIDCWLWGIDVKTFSDVQNRIL 258
           D Q A ++GI+   +  +   +  +  ++ 
Sbjct: 145 DIQLAENMGINGLRYDRETLNWPMIGEQLT 174

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187

 Score = 45.4 bits (107), Expect = 4e-06
 Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 10/119 (8%)

Query: 138 AKGEAWHLPHGAYQSILLLKDAGVKVAVVS--NFDTRLRKLLKDLNVIDLFDAVVISSEV 195
            +G+   L     + +  L+  GV  A  S  +      +LL+  ++   F    I    
Sbjct: 62  RRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPG- 120

Query: 196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL--WGIDVKTFSD 252
                    F+    +  +  S+ +   DDE+ +    + LG+ C     G++++T S 
Sbjct: 121 ----SKITHFERLQQKTGIPFSQMIFF-DDERRNIVDVSKLGVTCIHIQNGMNLQTLSQ 174

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 27/128 (21%)

Query: 141 EAWHLPHGAYQSILLLKDAGVKVAVVSN--------FD--------TRLRKLLKDLNV-I 183
               L      +I     AG+ V VV+N        F          R+ +LL++  V +
Sbjct: 53  AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFV 112

Query: 184 DLF-------DAVVISSEVGCE--KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGAN 234
           D+          V   +       KP+P +   A  +++++  R++ +GD   AD Q   
Sbjct: 113 DMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGK 171

Query: 235 SLGIDCWL 242
             G+    
Sbjct: 172 RAGLAQGW 179

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 30/140 (21%)

Query: 136 YYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSN--------FD--------TRLRKLLKD 179
           Y  + + +    G   ++  LK  G  + VV+N        F           +   L D
Sbjct: 42  YVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD 101

Query: 180 LNV-IDLF-------DAVVISSEVGCE--KPDPRIFKAALDQMSVEASRTVHIGDDEKAD 229
            +V +D            V      C+  KP P +  +A D + ++ + +  +GD  + D
Sbjct: 102 RDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLE-D 160

Query: 230 KQGANSLGIDCWLWGIDVKT 249
            Q A +  +      + V+T
Sbjct: 161 MQAAVAANVGT---KVLVRT 177

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKT 249
           KP+   F  AL          V IGDD + D  GA ++G+     GI VKT
Sbjct: 179 KPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGML----GILVKT 225

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261

 Score = 43.2 bits (101), Expect = 3e-05
 Identities = 15/100 (15%), Positives = 41/100 (41%), Gaps = 8/100 (8%)

Query: 148 GAYQSILLLKDAGVKVAVVSNFDTRLRKLL----KDLNVIDLFDAVVISSEVGCEKPDPR 203
               ++   ++AG+KV + S+     +KLL     + ++++L D     +++G  K +  
Sbjct: 134 DVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHF-DTKIG-HKVESE 191

Query: 204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGID-CWL 242
            ++   D +    +  + + D    +   A    +    +
Sbjct: 192 SYRKIADSIGCSTNNILFLTDVT-REASAAEEADVHVAVV 230

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271

 Score = 42.6 bits (101), Expect = 5e-05
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKT 249
           KP P  FK+AL  + VEA + V IGDD   D  GA   G+      + V+T
Sbjct: 190 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMR----ALQVRT 236

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 31/247 (12%), Positives = 64/247 (25%), Gaps = 76/247 (30%)

Query: 61  LLQLAEPVEETY----------ASIARKY---GLNVDSADIKKGFRKAFAAPWPEKLRYE 107
           ++   + V  T             + +K+    L ++   +    +     P      Y 
Sbjct: 54  IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113

Query: 108 -------GDGRPFWRLVVSEATGCTNDDYFEEVYE-----YYAKGEAWHLPHGAYQSILL 155
                   D + F +  VS           +   +        +     L  G       
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRL---------QPYLKLRQALLELRPAKNVLIDG------- 157

Query: 156 LKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVV--ISSEVG-CEKPDPRI-------- 204
           +  +G K  V  +       +     V    D  +  ++  +  C  P+  +        
Sbjct: 158 VLGSG-KTWVALD-------VCLSYKVQCKMDFKIFWLN--LKNCNSPETVLEMLQKLLY 207

Query: 205 -----FKAALDQMSVEASRTVHIGDDEK----ADKQGANSLGI--DCWLWGIDVKTFSDV 253
                + +  D  S    R  H    E       K   N L +  +          F ++
Sbjct: 208 QIDPNWTSRSDHSSNIKLRI-HSIQAELRRLLKSKPYENCLLVLLNVQNAKA-WNAF-NL 264

Query: 254 QNRILIT 260
             +IL+T
Sbjct: 265 SCKILLT 271

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	261
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	100.0
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.97
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.97
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.97
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.97
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.97
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.96
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.96
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.96
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.96
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.96
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.96
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.96
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.96
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.96
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.96
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.96
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.96
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.96
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.96
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.96
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.96
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.95
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.95
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.95
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.95
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.95
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.95
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.95
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.95
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.95
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.95
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.95
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.95
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.95
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.95
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.95
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.95
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.95
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.95
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.94
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.94
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.94
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.94
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.94
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.94
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.94
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.94
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.93
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.93
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.93
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.93
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.93
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.93
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.93
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.93
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.93
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.92
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.91
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.91
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.9
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.9
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.9
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.9
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.89
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.89
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.89
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.89
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.89
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.88
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.87
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.86
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.86
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.85
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.85
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.85
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.84
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.83
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.83
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.83
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.82
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.82
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.82
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.82
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.81
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.81
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.8
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.79
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.79
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.78
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.78
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.77
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.77
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.77
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.77
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.77
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.77
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.77
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.76
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.76
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.75
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.73
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.72
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.71
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.71
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.7
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.69
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.69
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.69
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.66
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.65
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.64
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.44
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.61
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.6
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.57
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.56
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.55
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.54
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.52
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.51
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.5
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.5
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.49
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.47
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.46
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.46
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	99.38
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.33
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	99.33
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.3
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.27
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	99.26
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.2
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.18
4gxt_A	385	A conserved functionally unknown protein; structur	99.17
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	99.14
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	99.03
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.03
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	98.84
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	98.83
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	98.77
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	98.72
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	98.69
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	98.69
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.65
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	98.36
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.32
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.24
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	98.14
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.14
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	98.01
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	97.96
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	97.85
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.84
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	97.64
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	97.55
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	97.25
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	97.24
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	97.03
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	97.0
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	96.97
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.79
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.45
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	96.01
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	95.92
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	95.91
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	95.89
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	95.34
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	94.87
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	94.74
1wv2_A	265	Thiazole moeity, thiazole biosynthesis protein THI	91.67
2q5c_A	196	NTRC family transcriptional regulator; structural	88.65
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	87.68
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	87.39
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	84.33
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	83.43
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	82.71
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	82.32
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	81.79

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=100.00  E-value=1.1e-31  Score=210.92  Aligned_cols=191  Identities=20%  Similarity=0.287  Sum_probs=147.9

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcC-CCchH
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG-CTNDD  128 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  128 (261)
                      +|+|+||+||||+|+...+..++.++++++|.+.+.+.....    .+.          ............... ...+.
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~----~g~----------~~~~~~~~~~~~~~~~~~~~~   66 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRI----MGV----------PEREGLPILMEALEIKDSLEN   66 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHH----TTS----------CHHHHHHHHHHHTTCCSCHHH
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHH----hcc----------chhhhhhhhhhcccchhhHHH
Confidence            589999999999999999999999999999998876544321    111          111222222222222 22333


Q ss_pred             HHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHH
Q 024886          129 YFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIF  205 (261)
Q Consensus       129 ~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~  205 (261)
                      +...+.+.+...  ....++||+.++++.|++.|++++++||++.. +...++.+|+..+||.++++++++..||+|++|
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~  146 (216)
T 3kbb_A           67 FKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIY  146 (216)
T ss_dssp             HHHHHHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHH
Confidence            444444333221  12478999999999999999999999999877 789999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEE-ECCCCCChHHHHH
Q 024886          206 KAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL-WGIDVKTFSDVQN  255 (261)
Q Consensus       206 ~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~-v~~~~~~~~el~~  255 (261)
                      ..+++++|++|++|+||||+ .+|+++|+++|+.+|+ +..+..+.+++.+
T Consensus       147 ~~a~~~lg~~p~e~l~VgDs-~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~  196 (216)
T 3kbb_A          147 LLVLERLNVVPEKVVVFEDS-KSGVEAAKSAGIERIYGVVHSLNDGKALLE  196 (216)
T ss_dssp             HHHHHHHTCCGGGEEEEECS-HHHHHHHHHTTCCCEEEECCSSSCCHHHHH
T ss_pred             HHHHHhhCCCccceEEEecC-HHHHHHHHHcCCcEEEEecCCCCCHHHHHh
Confidence            99999999999999999999 7999999999999874 7776555555443

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.97  E-value=4.1e-32  Score=217.49  Aligned_cols=186  Identities=17%  Similarity=0.199  Sum_probs=139.2

Q ss_pred             ccccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcC--
Q 024886           46 VKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG--  123 (261)
Q Consensus        46 ~~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  123 (261)
                      ++|++|+|+||+||||+|+...+..+|.++++++|++++.+....    ..+.          ........+......  
T Consensus         1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~----~~g~----------~~~~~~~~~~~~~~~~~   66 (243)
T 4g9b_A            1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNES----LKGI----------SRDESLRRILQHGGKEG   66 (243)
T ss_dssp             -CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTGGGG----GTTC----------CHHHHHHHHHHHTTCGG
T ss_pred             CCccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHH----HcCC----------CHHHHHHHHHHHhhccc
Confidence            467899999999999999988889999999999998865432111    0000          011111222211111  


Q ss_pred             -CCchH---HHH---HH-HHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCC
Q 024886          124 -CTNDD---YFE---EV-YEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEV  195 (261)
Q Consensus       124 -~~~~~---~~~---~~-~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~  195 (261)
                       ....+   +..   .. ...........++||+.++++.|+++|++++++||+.. ...+++.+|+..+|+.+++++++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~-~~~~l~~~gl~~~fd~i~~~~~~  145 (243)
T 4g9b_A           67 DFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN-APTILAALELREFFTFCADASQL  145 (243)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT-HHHHHHHTTCGGGCSEECCGGGC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc-hhhhhhhhhhccccccccccccc
Confidence             00011   111   11 11122233346899999999999999999999998643 56789999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +.+||+|++|..+++++|++|++|++|||+ .+|+++|+++|+.+|+|.++.
T Consensus       146 ~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs-~~di~aA~~aG~~~I~V~~g~  196 (243)
T 4g9b_A          146 KNSKPDPEIFLAACAGLGVPPQACIGIEDA-QAGIDAINASGMRSVGIGAGL  196 (243)
T ss_dssp             SSCTTSTHHHHHHHHHHTSCGGGEEEEESS-HHHHHHHHHHTCEEEEESTTC
T ss_pred             cCCCCcHHHHHHHHHHcCCChHHEEEEcCC-HHHHHHHHHcCCEEEEECCCC
Confidence            999999999999999999999999999999 899999999999999998873

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.97  E-value=3.9e-30  Score=201.42  Aligned_cols=186  Identities=18%  Similarity=0.230  Sum_probs=141.1

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCC-Cc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGC-TN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  126 (261)
                      |++|+|+||+||||+|+...+..++.++++++|......+..   ....+..             + ...+....+. ..
T Consensus         2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~g~~-------------~-~~~~~~~~~~~~~   64 (210)
T 2ah5_A            2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTI---RGFMGPP-------------L-ESSFATCLSKDQI   64 (210)
T ss_dssp             TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHH---HHTSSSC-------------H-HHHHHTTSCGGGH
T ss_pred             CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHH---HHHcCcc-------------H-HHHHHHHcCHHHH
Confidence            568999999999999998888889999999999875332221   1111111             1 1111111111 11


Q ss_pred             hHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          127 DDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       127 ~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      .++.+.+.+.+...  ....++||+.++|+.|++ |++++++||++.. +...++.+|+..+|+.+++++  +..||+|+
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~~Kp~p~  141 (210)
T 2ah5_A           65 SEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PEAPHKAD  141 (210)
T ss_dssp             HHHHHHHHHHHHHTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SSCCSHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CCCCCChH
Confidence            23334444444332  225789999999999999 9999999998876 788899999999999999888  78899999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                      .|..+++++|++|++|++|||+ .+|+++|+++|+.++++..+.....++.
T Consensus       142 ~~~~~~~~lg~~p~~~~~vgDs-~~Di~~a~~aG~~~i~v~~~~~~~~~l~  191 (210)
T 2ah5_A          142 VIHQALQTHQLAPEQAIIIGDT-KFDMLGARETGIQKLAITWGFGEQADLL  191 (210)
T ss_dssp             HHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEEESSSSSCHHHHH
T ss_pred             HHHHHHHHcCCCcccEEEECCC-HHHHHHHHHCCCcEEEEcCCCCCHHHHH
Confidence            9999999999999999999999 7999999999999999987755455543

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.97  E-value=5.2e-31  Score=211.93  Aligned_cols=184  Identities=17%  Similarity=0.196  Sum_probs=135.6

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCC-C
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGC-T  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  125 (261)
                      ..|+|+|+||+||||+|+...+..+|.++++++|++++.+....    ..+          ......+..+....... .
T Consensus        23 ~~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~~~~----~~g----------~~~~~~~~~~~~~~~~~~~   88 (250)
T 4gib_A           23 NAMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNES----LKG----------ISRMESLDRILEFGNKKYS   88 (250)
T ss_dssp             -CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTGGGG----TTT----------CCHHHHHHHHHHHTTCTTT
T ss_pred             cchhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHH----HhC----------cchHHHHHHhhhhhcCCCC
Confidence            34699999999999999988888999999999998865432110    000          00011111111111110 0


Q ss_pred             -ch----HHHHHHHHH----HhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCC
Q 024886          126 -ND----DYFEEVYEY----YAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVG  196 (261)
Q Consensus       126 -~~----~~~~~~~~~----~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~  196 (261)
                       ..    .+.+...+.    +.......++||+.++++.|++.|+++++.|++. .....++.+|+.++|+.++++++++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~-~~~~~L~~~gl~~~Fd~i~~~~~~~  167 (250)
T 4gib_A           89 FSEEEKVRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASK-NAINVLNHLGISDKFDFIADAGKCK  167 (250)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCT-THHHHHHHHTCGGGCSEECCGGGCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccc-hhhhHhhhcccccccceeecccccC
Confidence             01    111112222    2223345789999999999999999999877653 3567899999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ..||+|++|..+++++|++|++|++|||+ .+|+++|+++|+.+|+|++.
T Consensus       168 ~~KP~p~~~~~a~~~lg~~p~e~l~VGDs-~~Di~aA~~aG~~~i~v~~~  216 (250)
T 4gib_A          168 NNKPHPEIFLMSAKGLNVNPQNCIGIEDA-SAGIDAINSANMFSVGVGNY  216 (250)
T ss_dssp             SCTTSSHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHTTCEEEEESCT
T ss_pred             CCCCcHHHHHHHHHHhCCChHHeEEECCC-HHHHHHHHHcCCEEEEECCh
Confidence            99999999999999999999999999999 79999999999999999765

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.97  E-value=1.8e-29  Score=201.76  Aligned_cols=192  Identities=19%  Similarity=0.241  Sum_probs=147.6

Q ss_pred             ccccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC
Q 024886           46 VKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT  125 (261)
Q Consensus        46 ~~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (261)
                      +||++|+|+||+||||+|+...+..++.++++++|............    +          ......+...+....+..
T Consensus        20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----g----------~~~~~~~~~~~~~~~~~~   85 (243)
T 3qxg_A           20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHE----G----------RTGASTINIVFQRELGKE   85 (243)
T ss_dssp             --CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTT----T----------SCHHHHHHHHHHHHHSSC
T ss_pred             ccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHh----C----------CCHHHHHHHHHHHHhCCC
Confidence            36678999999999999999888899999999999887665433211    1          111222233333322221


Q ss_pred             -chH----HHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc--ceEEecCCCCC
Q 024886          126 -NDD----YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF--DAVVISSEVGC  197 (261)
Q Consensus       126 -~~~----~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f--~~i~~~~~~~~  197 (261)
                       ..+    ......+.+.......++||+.++|+.|++.|++++++||.+.. +...++. |+..+|  +.++++++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~  164 (243)
T 3qxg_A           86 ATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKY  164 (243)
T ss_dssp             CCHHHHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSS
T ss_pred             CCHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCC
Confidence             122    22223333433344688999999999999999999999998866 6777888 999999  99999999999


Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          198 EKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      +||++.+|..+++++|++|++|++|||+ .+|+++|+.+|+.++++.++....+++
T Consensus       165 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~v~~~~~~~~~l  219 (243)
T 3qxg_A          165 GKPNPEPYLMALKKGGLKADEAVVIENA-PLGVEAGHKAGIFTIAVNTGPLDGQVL  219 (243)
T ss_dssp             CTTSSHHHHHHHHHTTCCGGGEEEEECS-HHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred             CCCChHHHHHHHHHcCCCHHHeEEEeCC-HHHHHHHHHCCCEEEEEeCCCCCHHHH
Confidence            9999999999999999999999999999 799999999999999998875554444

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.97  E-value=2.9e-29  Score=195.79  Aligned_cols=184  Identities=18%  Similarity=0.297  Sum_probs=144.9

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc-CCCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT-GCTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  126 (261)
                      ||+|+|+||+||||+++...+..++.++++++|...+.......    .+.          .....+..+..... ....
T Consensus         3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~g~----------~~~~~~~~~~~~~~~~~~~   68 (214)
T 3e58_A            3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFF----IGG----------NTKQVWENILRDEYDKWDV   68 (214)
T ss_dssp             -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSCHHHH----TTS----------CGGGCHHHHHGGGGGGSCH
T ss_pred             ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHH----cCC----------CHHHHHHHHHHhhcCCCCH
Confidence            46899999999999999988888999999999887654433221    111          11222233322221 1223


Q ss_pred             hHHHHHHHHHHhhCC---ceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCH
Q 024886          127 DDYFEEVYEYYAKGE---AWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       127 ~~~~~~~~~~~~~~~---~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~  202 (261)
                      ..+...+.+.+....   ...++||+.++|+.|++.|++++++||++.. +...++.+|+..+|+.++++++.+.+||++
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~  148 (214)
T 3e58_A           69 STLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNP  148 (214)
T ss_dssp             HHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSS
T ss_pred             HHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCCh
Confidence            344444444444331   2478999999999999999999999999876 789999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ..|+.+++++|++|+++++|||+ .+|+++|+.+|+.++++.++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~iGD~-~~Di~~a~~aG~~~~~~~~~  191 (214)
T 3e58_A          149 EIYLTALKQLNVQASRALIIEDS-EKGIAAGVAADVEVWAIRDN  191 (214)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECS-HHHHHHHHHTTCEEEEECCS
T ss_pred             HHHHHHHHHcCCChHHeEEEecc-HhhHHHHHHCCCEEEEECCC
Confidence            99999999999999999999999 89999999999999999875

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.96  E-value=5.1e-29  Score=198.94  Aligned_cols=189  Identities=22%  Similarity=0.236  Sum_probs=141.4

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCC--CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHH------
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLN--VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSE------  120 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  120 (261)
                      ++|+|+||+||||+|+...+..++.++++++|..  .+.+....    ..+...          ...+......      
T Consensus         3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~g~~~----------~~~~~~~~~~~~~~~~   68 (240)
T 2hi0_A            3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKN----FFGSGV----------VVAVTRALAYEAGSSR   68 (240)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHH----HCSSCH----------HHHHHHHHHHHTTCCH
T ss_pred             cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHH----hcCccH----------HHHHHHHHHhcccccc
Confidence            5799999999999999998999999999999986  44443322    111100          0111111100      


Q ss_pred             -------------hcCCC---chHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcC
Q 024886          121 -------------ATGCT---NDDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLN  181 (261)
Q Consensus       121 -------------~~~~~---~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~g  181 (261)
                                   .....   ..++.+.+.+.|..  .....++||+.++|+.|+++|++++|+||++.. +...++.+|
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~  148 (240)
T 2hi0_A           69 ESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELF  148 (240)
T ss_dssp             HHHTTTTSTTCCCCTTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHS
T ss_pred             cccccccccccccCCCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence                         00001   11222333343432  233688999999999999999999999998876 788999999


Q ss_pred             cccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          182 VIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       182 l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      +. +|+.++++++++.+||+|++|..+++++|++|++|++|||+ .+|+++|+++|+.++++..+.....++
T Consensus       149 l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs-~~Di~~a~~aG~~~v~v~~~~~~~~~~  218 (240)
T 2hi0_A          149 PG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDS-EIDIQTARNSEMDEIAVNWGFRSVPFL  218 (240)
T ss_dssp             TT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHTTCEEEEESSSSSCHHHH
T ss_pred             Cc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCC-HHHHHHHHHCCCeEEEECCCCCchhHH
Confidence            98 99999999999999999999999999999999999999999 899999999999999987764443333

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.96  E-value=1.1e-28  Score=195.50  Aligned_cols=191  Identities=24%  Similarity=0.276  Sum_probs=147.8

Q ss_pred             cccccEEEEccCCccccccccHHHHH-HHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETY-ASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (261)
                      |+++|+|+||+||||+|+...+..++ .++++++|.....                 .....  +... ...+....+..
T Consensus        22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~-----------------~~~~~--g~~~-~~~~~~~~~~~   81 (231)
T 3kzx_A           22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNID-----------------LDSIP--NSTI-PKYLITLLGKR   81 (231)
T ss_dssp             CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCC-----------------CTTSC--TTTH-HHHHHHHHGGG
T ss_pred             cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHH-----------------HHHHh--CccH-HHHHHHHhCch
Confidence            66789999999999999998888888 9999988876300                 00000  0111 11122222222


Q ss_pred             chHHHHHHHHHHh-h--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCC
Q 024886          126 NDDYFEEVYEYYA-K--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPD  201 (261)
Q Consensus       126 ~~~~~~~~~~~~~-~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~  201 (261)
                      .......+.+.+. .  .....++||+.++++.|++.|++++++||.+.. +...++.+|+..+|+.++++++.+.+||+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~  161 (231)
T 3kzx_A           82 WKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPS  161 (231)
T ss_dssp             HHHHHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTS
T ss_pred             HHHHHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCC
Confidence            2333344444444 1  233688999999999999999999999998876 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCC-cEEEEcCCchhhhHHHHhCCCeEEEECCC--------CCChHHHHHhhh
Q 024886          202 PRIFKAALDQMSVEAS-RTVHIGDDEKADKQGANSLGIDCWLWGID--------VKTFSDVQNRIL  258 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~-~~l~iGD~~~~Di~~a~~~G~~~i~v~~~--------~~~~~el~~~l~  258 (261)
                      ++.|..+++++|++|+ ++++|||+ .+|+++|+.+|+.+++++++        ..++.+|.++|.
T Consensus       162 ~~~~~~~~~~lgi~~~~~~v~vGD~-~~Di~~a~~aG~~~v~~~~~~~~~~~~~~~~~~el~~~l~  226 (231)
T 3kzx_A          162 PEPVLAALTNINIEPSKEVFFIGDS-ISDIQSAIEAGCLPIKYGSTNIIKDILSFKNFYDIRNFIC  226 (231)
T ss_dssp             SHHHHHHHHHHTCCCSTTEEEEESS-HHHHHHHHHTTCEEEEECC-----CCEEESSHHHHHHHHH
T ss_pred             hHHHHHHHHHcCCCcccCEEEEcCC-HHHHHHHHHCCCeEEEECCCCCCCCceeeCCHHHHHHHHH
Confidence            9999999999999999 99999999 79999999999999999776        456778877764

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.96  E-value=1.2e-28  Score=195.88  Aligned_cols=198  Identities=18%  Similarity=0.268  Sum_probs=148.7

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCC---CHHHHHHHHHHHhcCCCccccccCCCChhHH----HHHHHH
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNV---DSADIKKGFRKAFAAPWPEKLRYEGDGRPFW----RLVVSE  120 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  120 (261)
                      |++|+|+||+||||+|+...+..++.++++++|...   +.......+.......+............+.    ...+..
T Consensus         3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (240)
T 3qnm_A            3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA   82 (240)
T ss_dssp             CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            578999999999999998888889999999999876   6665555443322211111111111112221    222222


Q ss_pred             hcCCCchHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCC
Q 024886          121 ATGCTNDDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGC  197 (261)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~  197 (261)
                       .+.........+.+.|...  ....++||+.++|+.|+ .|++++++||.+.. +...++.+|+..+|+.+++++..+.
T Consensus        83 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~  160 (240)
T 3qnm_A           83 -VGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGV  160 (240)
T ss_dssp             -TTCCCHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTC
T ss_pred             -cCCCcHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCC
Confidence             2333444445444444321  22578999999999999 89999999998877 6889999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          198 EKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +||++.+|+.+++++|++|+++++|||++.+|+++|+.+|+++++++++.
T Consensus       161 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~  210 (240)
T 3qnm_A          161 LKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTE  210 (240)
T ss_dssp             CTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSC
T ss_pred             CCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCC
Confidence            99999999999999999999999999993499999999999999998774

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.96  E-value=2.8e-28  Score=193.65  Aligned_cols=208  Identities=17%  Similarity=0.265  Sum_probs=151.4

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHH----HHHHHHhc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFW----RLVVSEAT  122 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  122 (261)
                      ||++|+|+||+||||+|+...+..++.++++++|.......... +.......+............+.    ........
T Consensus         4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (238)
T 3ed5_A            4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQ-YKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYG   82 (238)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHH-HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTT
T ss_pred             cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHH-HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcC
Confidence            56789999999999999998888999999999999876544322 11110000000000111111211    11221111


Q ss_pred             CC-CchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCC
Q 024886          123 GC-TNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKP  200 (261)
Q Consensus       123 ~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp  200 (261)
                      .. ....+...+.+.+..  ...++||+.++|+.|++. ++++++||.+.. +...++.+|+..+|+.++++++.+.+||
T Consensus        83 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp  159 (238)
T 3ed5_A           83 YEADGALLEQKYRRFLEE--GHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKP  159 (238)
T ss_dssp             CCCCHHHHHHHHHHHHTT--CCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTT
T ss_pred             CCCcHHHHHHHHHHHHHh--cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCCC
Confidence            11 112222333333322  257899999999999999 999999998877 6889999999999999999999999999


Q ss_pred             CHHHHHHHHHHcC-CCCCcEEEEcCCch-hhhHHHHhCCCeEEEECCC-------------CCChHHHHHhhhc
Q 024886          201 DPRIFKAALDQMS-VEASRTVHIGDDEK-ADKQGANSLGIDCWLWGID-------------VKTFSDVQNRILI  259 (261)
Q Consensus       201 ~~~~~~~~~~~l~-~~~~~~l~iGD~~~-~Di~~a~~~G~~~i~v~~~-------------~~~~~el~~~l~~  259 (261)
                      ++.+|+.+++++| ++|+++++|||+ . +|+++|+.+|+.++++.++             ..++.||.++|..
T Consensus       160 ~~~~~~~~~~~~g~~~~~~~i~vGD~-~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~  232 (238)
T 3ed5_A          160 MKEYFNYVFERIPQFSAEHTLIIGDS-LTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNI  232 (238)
T ss_dssp             CHHHHHHHHHTSTTCCGGGEEEEESC-TTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHTC
T ss_pred             ChHHHHHHHHHcCCCChhHeEEECCC-cHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHHh
Confidence            9999999999999 999999999999 6 9999999999999999775             4567777777753

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.96  E-value=4e-29  Score=197.01  Aligned_cols=204  Identities=26%  Similarity=0.325  Sum_probs=142.7

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCC-ccccccCCCChhHHHHHHHHhcCCCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPW-PEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      |++|+|+||+||||+|+...+..++.++++++|.+.+.+.....+....+... .....  ..... ...+.........
T Consensus         1 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~--~g~~~-~~~~~~~~~~~~~   77 (220)
T 2zg6_A            1 MKYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDG--LEHVD-PKDFLYILGIYPS   77 (220)
T ss_dssp             CCCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-------CCCCC-HHHHHHHHTCCCC
T ss_pred             CCceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccc--ccccc-HHHHHHHcCCCCc
Confidence            35789999999999999988888999999999998876665554443323211 00000  00001 2333333322223


Q ss_pred             hHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCCCHHHHH
Q 024886          127 DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFK  206 (261)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~  206 (261)
                      .+..+.+.+.+.......++||+.++|+.|+++|++++++||++..+...++.+|+..+|+.++++++.+..||+|.+|.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~  157 (220)
T 2zg6_A           78 ERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASPRVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFG  157 (220)
T ss_dssp             HHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHHHHHHHHHHHTCGGGCSEEC-----------CCHHH
T ss_pred             HHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHH
Confidence            45555555544433446899999999999999999999999987767889999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCcEEEEcCCchh-hhHHHHhCCCeEEEECCC---------CCChHHHHHhhh
Q 024886          207 AALDQMSVEASRTVHIGDDEKA-DKQGANSLGIDCWLWGID---------VKTFSDVQNRIL  258 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~~~-Di~~a~~~G~~~i~v~~~---------~~~~~el~~~l~  258 (261)
                      .+++++|++|   ++|||+ .+ |+++|+++|+.++++.++         +.++.|+.+.|.
T Consensus       158 ~~~~~~~~~~---~~vgD~-~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~i~~l~el~~~l~  215 (220)
T 2zg6_A          158 FALAKVGYPA---VHVGDI-YELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLREALQKIE  215 (220)
T ss_dssp             HHHHHHCSSE---EEEESS-CCCCCCCSSSCSEEEEEBCTTSCCTTCCSCBSSHHHHHHHHH
T ss_pred             HHHHHcCCCe---EEEcCC-chHhHHHHHHCCCeEEEECCCCCCCCcceEECCHHHHHHHHH
Confidence            9999999988   999999 66 999999999999998754         345666666553

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.96  E-value=2.4e-28  Score=195.18  Aligned_cols=190  Identities=18%  Similarity=0.235  Sum_probs=145.8

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC-
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT-  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  125 (261)
                      +|++|+|+||+||||+|+...+..++.++++++|...+........    +          ......+........+.. 
T Consensus        20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----g----------~~~~~~~~~~~~~~~~~~~   85 (247)
T 3dv9_A           20 SIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHE----G----------RTGASTINIVSRRERGHDA   85 (247)
T ss_dssp             CCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTT----T----------SCHHHHHHHHHHHHHSSCC
T ss_pred             CCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHh----C----------CChHHHHHHHHHHhcCCCC
Confidence            4578999999999999999888889999999999987665433211    1          111222233333322321 


Q ss_pred             chHHH----HHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc--ceEEecCCCCCC
Q 024886          126 NDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF--DAVVISSEVGCE  198 (261)
Q Consensus       126 ~~~~~----~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f--~~i~~~~~~~~~  198 (261)
                      ..+..    ....+.+.......++||+.++|+.|++.|++++++||.+.. +...++. |+..+|  +.++++++++.+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~  164 (247)
T 3dv9_A           86 TEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYG  164 (247)
T ss_dssp             CHHHHHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSC
T ss_pred             CHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCC
Confidence            22222    222333433344688999999999999999999999998876 6778888 999999  999999999999


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHH
Q 024886          199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       199 Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~e  252 (261)
                      ||++.+|+.+++++|++|++|++|||+ .+|+++|+.+|+.++++.++....++
T Consensus       165 kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~v~~~~~~~~~  217 (247)
T 3dv9_A          165 KPNPEPYLMALKKGGFKPNEALVIENA-PLGVQAGVAAGIFTIAVNTGPLHDNV  217 (247)
T ss_dssp             TTSSHHHHHHHHHHTCCGGGEEEEECS-HHHHHHHHHTTSEEEEECCSSSCHHH
T ss_pred             CCCCHHHHHHHHHcCCChhheEEEeCC-HHHHHHHHHCCCeEEEEcCCCCCHHH
Confidence            999999999999999999999999999 79999999999999999887554444

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.96  E-value=2.6e-28  Score=197.54  Aligned_cols=198  Identities=31%  Similarity=0.493  Sum_probs=148.6

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCcccc----ccCCCChhHHHHHHHHhc---
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKL----RYEGDGRPFWRLVVSEAT---  122 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---  122 (261)
                      +|+|+||+||||+++...+..++.++++++|..++.+.....+..........+.    .........+...+....   
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   80 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLA   80 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHHc
Confidence            4789999999999999888899999999999988877665544332221111100    001122333333222221   


Q ss_pred             CC-CchHHHHHHHHHHh---hCCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCC
Q 024886          123 GC-TNDDYFEEVYEYYA---KGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCE  198 (261)
Q Consensus       123 ~~-~~~~~~~~~~~~~~---~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~  198 (261)
                      +. ....+.....+.+.   ....+.++||+.++|+.|++.|++++|+||+...+..+++.+|+..+|+.++++++.+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~  160 (263)
T 3k1z_A           81 GVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTSEAAGWP  160 (263)
T ss_dssp             TCCCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTTHHHHHHHTTCGGGCSCEEEHHHHSSC
T ss_pred             CCCCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHHHHHHHHhCCcHHhhhEEEeecccCCC
Confidence            22 22332222333332   223468999999999999999999999999877788899999999999999999999999


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       199 Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      ||++.+|..+++++|++|++|++|||+..+|+++|+++|+.++++..+.
T Consensus       161 Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~  209 (263)
T 3k1z_A          161 KPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQ  209 (263)
T ss_dssp             TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSS
T ss_pred             CCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCC
Confidence            9999999999999999999999999993399999999999999998774

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.96  E-value=3.7e-28  Score=192.32  Aligned_cols=185  Identities=17%  Similarity=0.127  Sum_probs=142.1

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      |+++|+|+||+||||+++...+..++.++++++|...+.......    .+..          ....+..+.........
T Consensus         3 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~g~~----------~~~~~~~~~~~~~~~~~   68 (233)
T 3s6j_A            3 LRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRK----IGMS----------GGLMLKSLSRETGMSIT   68 (233)
T ss_dssp             --CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHH----TTSC----------HHHHHHHHHHC----CC
T ss_pred             CCcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHH----cCCc----------HHHHHHHHHHhcCCCCC
Confidence            346899999999999999888888999999999998776654332    1110          11222222221111111


Q ss_pred             h----HHHHHHHHHHhhC-CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCC
Q 024886          127 D----DYFEEVYEYYAKG-EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKP  200 (261)
Q Consensus       127 ~----~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp  200 (261)
                      .    .+.....+.+... ....++||+.++|+.|++.|++++++||.... +...++.+|+..+|+.+++++..+.+||
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp  148 (233)
T 3s6j_A           69 DEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKP  148 (233)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTT
T ss_pred             HHHHHHHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCC
Confidence            1    2222222333221 23588999999999999999999999998877 7899999999999999999999999999


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++.+|+.+++.+|++|+++++|||+ .+|+++|+.+|+.+++|..+
T Consensus       149 ~~~~~~~~~~~l~~~~~~~i~iGD~-~~Di~~a~~aG~~~i~v~~g  193 (233)
T 3s6j_A          149 DPDLFLAAAKKIGAPIDECLVIGDA-IWDMLAARRCKATGVGLLSG  193 (233)
T ss_dssp             STHHHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHTTCEEEEEGGG
T ss_pred             ChHHHHHHHHHhCCCHHHEEEEeCC-HHhHHHHHHCCCEEEEEeCC
Confidence            9999999999999999999999999 79999999999999999765

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.96  E-value=1e-28  Score=194.97  Aligned_cols=181  Identities=24%  Similarity=0.305  Sum_probs=141.7

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCC-CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLN-VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      |++|+|+||+||||+|+...+..++.++++++|.+ .+.+.+.    ...+          ......+.....   ....
T Consensus         1 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~g----------~~~~~~~~~~~~---~~~~   63 (222)
T 2nyv_A            1 MSLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVT----KYIG----------GGVRALLEKVLK---DKFR   63 (222)
T ss_dssp             CEECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGG----GGCS----------SCHHHHHHHHHG---GGCC
T ss_pred             CCCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHH----HHhC----------cCHHHHHHHHhC---hHHH
Confidence            35789999999999999888888899999988875 2222111    0000          011222222221   2233


Q ss_pred             hHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          127 DDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       127 ~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      .++...+.+.|...  ....++||+.++|+.|++.|++++++||++.. +..+++.+|+..+|+.++++++++..||++.
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  143 (222)
T 2nyv_A           64 EEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPT  143 (222)
T ss_dssp             THHHHHHHHHHHHCSCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTH
T ss_pred             HHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChH
Confidence            44555555555432  34689999999999999999999999998877 7889999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      .|..+++++|++|+++++|||+ .+|+.+|+.+|+.++++..+
T Consensus       144 ~~~~~~~~~~~~~~~~~~vGD~-~~Di~~a~~aG~~~i~v~~g  185 (222)
T 2nyv_A          144 PVLKTLEILGEEPEKALIVGDT-DADIEAGKRAGTKTALALWG  185 (222)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHHTCEEEEETTS
T ss_pred             HHHHHHHHhCCCchhEEEECCC-HHHHHHHHHCCCeEEEEcCC
Confidence            9999999999999999999999 89999999999999988764

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.96  E-value=1.9e-28  Score=194.77  Aligned_cols=187  Identities=18%  Similarity=0.182  Sum_probs=141.3

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCC-C
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGC-T  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  125 (261)
                      .+++|+|+||+||||+|+...+..++.++++++|...+.+.....    .+...          ...+.......... .
T Consensus        16 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~g~~~----------~~~~~~~~~~~~~~~~   81 (237)
T 4ex6_A           16 AAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILST----VGRPL----------PASLAGLLGVPVEDPR   81 (237)
T ss_dssp             -CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHH----TTSCH----------HHHHHHHHTSCTTSHH
T ss_pred             cccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCCHHHHHHh----cCccH----------HHHHHHHhCCCCCHHH
Confidence            457899999999999999988889999999999855555443321    11110          11111111110000 0


Q ss_pred             chHHHHHHHHHHhhC----CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCC
Q 024886          126 NDDYFEEVYEYYAKG----EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKP  200 (261)
Q Consensus       126 ~~~~~~~~~~~~~~~----~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp  200 (261)
                      ...+...+.+.+...    ....++||+.++|+.|++.|++++++||.... ++.+++.+|+..+|+.+++++.++.+||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp  161 (237)
T 4ex6_A           82 VAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKP  161 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTT
T ss_pred             HHHHHHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCC
Confidence            112222222222221    23578999999999999999999999998877 7899999999999999999999999999


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      ++.+|+.+++++|++|++|++|||+ .+|+++|+.+|+.++++..+..
T Consensus       162 ~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~v~~g~~  208 (237)
T 4ex6_A          162 HPDMALHVARGLGIPPERCVVIGDG-VPDAEMGRAAGMTVIGVSYGVS  208 (237)
T ss_dssp             SSHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHTTCEEEEESSSSS
T ss_pred             CHHHHHHHHHHcCCCHHHeEEEcCC-HHHHHHHHHCCCeEEEEecCCC
Confidence            9999999999999999999999999 7999999999999999976643

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.96  E-value=4.2e-28  Score=195.58  Aligned_cols=186  Identities=22%  Similarity=0.292  Sum_probs=144.9

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      +|++|+|+||+||||+|+...+..++.++++++|...........+   .+.          .....+..+.........
T Consensus        25 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~g~----------~~~~~~~~~~~~~~~~~~   91 (259)
T 4eek_A           25 DAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYF---TGQ----------RFDGVLAYLAQQHDFVPP   91 (259)
T ss_dssp             CCCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHT---TTC----------CHHHHHHHHHHHHCCCCC
T ss_pred             hcCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHH---hCC----------CHHHHHHHHHHHcCCCCC
Confidence            3578999999999999998888889999999999887665443321   111          112222333222221222


Q ss_pred             hHHHHHHHHHHhh-CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccce-EEecCCCC-CCCCCH
Q 024886          127 DDYFEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDA-VVISSEVG-CEKPDP  202 (261)
Q Consensus       127 ~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~-i~~~~~~~-~~Kp~~  202 (261)
                      ......+.+.+.. .....++||+.++|+.|++.|++++|+||.... +...++.+|+..+|+. ++++++.+ .+||++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~  171 (259)
T 4eek_A           92 PDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHP  171 (259)
T ss_dssp             TTHHHHHHHHHHHHHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSS
T ss_pred             HHHHHHHHHHHHHHhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCCh
Confidence            2333333333221 133689999999999999999999999999876 7899999999999999 99999999 999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      .+|+.+++.+|++|+++++|||+ .+|+++|+.+|+.++++.++
T Consensus       172 ~~~~~~~~~lgi~~~~~i~iGD~-~~Di~~a~~aG~~~i~v~~g  214 (259)
T 4eek_A          172 DLYTFAAQQLGILPERCVVIEDS-VTGGAAGLAAGATLWGLLVP  214 (259)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEEECCT
T ss_pred             HHHHHHHHHcCCCHHHEEEEcCC-HHHHHHHHHCCCEEEEEccC
Confidence            99999999999999999999999 79999999999999999765

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.96  E-value=1.3e-28  Score=194.24  Aligned_cols=184  Identities=20%  Similarity=0.246  Sum_probs=139.9

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      +++|+|+||+||||+|+...+..++.++++++|..........   ...+             .... ..+....+....
T Consensus         2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~g-------------~~~~-~~~~~~~~~~~~   64 (226)
T 3mc1_A            2 SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLN---KFVG-------------PPLK-TSFMEYYNFDEE   64 (226)
T ss_dssp             CCCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGG---GGSS-------------SCHH-HHHHHHHCCCHH
T ss_pred             CCCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHH---HHhC-------------cCHH-HHHHHHhCCCHH
Confidence            3589999999999999988888899999988887643211110   0110             1111 111222222222


Q ss_pred             ---HHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCC
Q 024886          128 ---DYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPD  201 (261)
Q Consensus       128 ---~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~  201 (261)
                         .....+.+.+...  ....++||+.++++.|++.|++++++||.... +...++.+|+..+|+.+++++..+.+||+
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~  144 (226)
T 3mc1_A           65 TATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTK  144 (226)
T ss_dssp             HHHHHHHHHHHHHTTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSH
T ss_pred             HHHHHHHHHHHHHHHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCC
Confidence               2222333333321  22578999999999999999999999998877 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCC
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKT  249 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~  249 (261)
                      +.+|..+++++|++|+++++|||+ .+|+++|+.+|+.++++..+...
T Consensus       145 ~~~~~~~~~~lgi~~~~~i~iGD~-~~Di~~a~~aG~~~i~v~~g~~~  191 (226)
T 3mc1_A          145 EDVIRYAMESLNIKSDDAIMIGDR-EYDVIGALKNNLPSIGVTYGFGS  191 (226)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHTTTCCEEEESSSSSC
T ss_pred             HHHHHHHHHHhCcCcccEEEECCC-HHHHHHHHHCCCCEEEEccCCCC
Confidence            999999999999999999999999 79999999999999999866433

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.96  E-value=7.5e-28  Score=193.11  Aligned_cols=186  Identities=17%  Similarity=0.217  Sum_probs=142.9

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhc-CCC
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEAT-GCT  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  125 (261)
                      ++++|+|+||+||||+|+...+..++.++++++|...+.+.....    .+.          .....+..+..... ...
T Consensus        27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~g~----------~~~~~~~~~~~~~~~~~~   92 (250)
T 3l5k_A           27 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLV----MGK----------KALEAAQIIIDVLQLPMS   92 (250)
T ss_dssp             CCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHH----TTC----------CHHHHHHHHHHHHTCSSC
T ss_pred             ccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHh----cCC----------CHHHHHHHHHHHhCCCCC
Confidence            467899999999999999888889999999999988766544321    111          11222233332222 222


Q ss_pred             chHHHHHHHHHHhh-CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh-cCcccccceEEecC--CCCCCCC
Q 024886          126 NDDYFEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKD-LNVIDLFDAVVISS--EVGCEKP  200 (261)
Q Consensus       126 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~-~gl~~~f~~i~~~~--~~~~~Kp  200 (261)
                      ...+...+.+.+.. .....++||+.++|+.|++.|++++++||.... +...+.. +|+..+|+.+++++  .++.+||
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp  172 (250)
T 3l5k_A           93 KEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKP  172 (250)
T ss_dssp             HHHHHHHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTT
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCC
Confidence            33333333333322 123578999999999999999999999998866 5666654 58889999999999  8999999


Q ss_pred             CHHHHHHHHHHcCCCC--CcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          201 DPRIFKAALDQMSVEA--SRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~--~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      ++++|+.+++++|+++  ++|++|||+ .+|+++|+.+|+.++++..+.
T Consensus       173 ~~~~~~~~~~~lgi~~~~~~~i~iGD~-~~Di~~a~~aG~~~i~v~~~~  220 (250)
T 3l5k_A          173 DPDIFLACAKRFSPPPAMEKCLVFEDA-PNGVEAALAAGMQVVMVPDGN  220 (250)
T ss_dssp             STHHHHHHHHTSSSCCCGGGEEEEESS-HHHHHHHHHTTCEEEECCCTT
T ss_pred             ChHHHHHHHHHcCCCCCcceEEEEeCC-HHHHHHHHHcCCEEEEEcCCC
Confidence            9999999999999998  999999999 799999999999999987763

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.96  E-value=1.1e-27  Score=190.25  Aligned_cols=191  Identities=18%  Similarity=0.226  Sum_probs=141.4

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCCh----hHHHHHHHHhc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGR----PFWRLVVSEAT  122 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  122 (261)
                      ++++|+|+||+||||+|+...+..++.++++++|..++.+.....+...........  ......    ..+..+.....
T Consensus         3 ~~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~   80 (240)
T 3smv_A            3 LTDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTET--PGALYQDILRAVYDRIAKEWG   80 (240)
T ss_dssp             GGGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSS--CCSCHHHHHHHHHHHHHHHTT
T ss_pred             CccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhC--CCCChhHHHHHHHHHHHHHhC
Confidence            457899999999999999888888999999999999888777665554333221110  000111    11222222222


Q ss_pred             CCCchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCC
Q 024886          123 GCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPD  201 (261)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~  201 (261)
                      ..........+.+.+   ....++||+.++|+.|++ |++++++||.+.. +...++.  +..+|+.++++++++..||+
T Consensus        81 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~~~KP~  154 (240)
T 3smv_A           81 LEPDAAEREEFGTSV---KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVGSYKPN  154 (240)
T ss_dssp             CCCCHHHHHHHHTGG---GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHTSCTTS
T ss_pred             CCCCHHHHHHHHHHH---hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccCCCCCC
Confidence            112223222222222   235889999999999999 7999999998876 5667766  55789999999999999999


Q ss_pred             HHHHHHH---HHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECC
Q 024886          202 PRIFKAA---LDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGI  245 (261)
Q Consensus       202 ~~~~~~~---~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~  245 (261)
                      +.+|..+   ++++|++|++|++|||+..+|+++|+.+|+.++++.+
T Consensus       155 ~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~  201 (240)
T 3smv_A          155 PNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYR  201 (240)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECT
T ss_pred             HHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcC
Confidence            9999999   8999999999999999933999999999999998764

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.96  E-value=2.4e-27  Score=192.47  Aligned_cols=196  Identities=13%  Similarity=0.137  Sum_probs=141.9

Q ss_pred             cccccEEEEccCCccccccccH-HHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPV-EETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (261)
                      |+++|+|+||+||||+|+.... ...+.+.++++|+.++......    ..+......+............+........
T Consensus        11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (277)
T 3iru_A           11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEARE----PMGTEKSEHIRRMLGNSRIANAWLSIKGQAS   86 (277)
T ss_dssp             CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHHHHT----TTTSCHHHHHHHHTTSHHHHHHHHHHHSSCC
T ss_pred             hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHHHHH----HhcCchHHHHHHhccchHHHHHHHHHhccCC
Confidence            4578999999999999988766 6889999999998876554332    1111111111111111222222222111111


Q ss_pred             chHHHHHH----HHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccc-cceEEecCCCCC
Q 024886          126 NDDYFEEV----YEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDL-FDAVVISSEVGC  197 (261)
Q Consensus       126 ~~~~~~~~----~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~-f~~i~~~~~~~~  197 (261)
                      .......+    .+.+..  .....++||+.++|+.|++.|++++++||.+.. +...++.+|+..+ |+.+++++..+.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  166 (277)
T 3iru_A           87 NEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVR  166 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSS
T ss_pred             CHHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCC
Confidence            11222222    222211  112478999999999999999999999998877 6889999998888 899999999999


Q ss_pred             CCCCHHHHHHHHHHcCCCC-CcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          198 EKPDPRIFKAALDQMSVEA-SRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~-~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +||++.+|+.+++++|++| ++|++|||+ .+|+++|+.+|+.+++|..+.
T Consensus       167 ~kp~~~~~~~~~~~lgi~~~~~~i~vGD~-~~Di~~a~~aG~~~v~v~~g~  216 (277)
T 3iru_A          167 GRPFPDMALKVALELEVGHVNGCIKVDDT-LPGIEEGLRAGMWTVGVSCSG  216 (277)
T ss_dssp             CTTSSHHHHHHHHHHTCSCGGGEEEEESS-HHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCHHHHHHHHHHcCCCCCccEEEEcCC-HHHHHHHHHCCCeEEEEecCC
Confidence            9999999999999999999 999999999 799999999999999998774

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.95  E-value=3.7e-27  Score=190.49  Aligned_cols=196  Identities=22%  Similarity=0.292  Sum_probs=137.1

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHH----hCCCCCHHHHHHH-HHHHhcCCCccccccCCCChhH----HHHH
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARK----YGLNVDSADIKKG-FRKAFAAPWPEKLRYEGDGRPF----WRLV  117 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~----~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~  117 (261)
                      .+++|+|+||+||||+|+...+..++.+++++    +|........... +..........   .......+    +...
T Consensus        15 ~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   91 (260)
T 2gfh_A           15 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHP---YSTCITDVRTSHWEEA   91 (260)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC-------CHHHHHHHHHHHH
T ss_pred             cccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhcccc---ccccHHHHHHHHHHHH
Confidence            34789999999999999988888888887764    4554321211111 11222211100   00111111    1122


Q ss_pred             HHHhc-CCCchHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecC
Q 024886          118 VSEAT-GCTNDDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISS  193 (261)
Q Consensus       118 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~  193 (261)
                      +.... ..........+.+.|..  .....++||+.++|+.|++ +++++|+||++.. +...++.+|+..+|+.+++++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~  170 (260)
T 2gfh_A           92 IQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGG  170 (260)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGG
T ss_pred             HHHhcCccchHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecC
Confidence            22211 12233333344433322  1225789999999999987 5999999999877 688999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCC-eEEEECCC
Q 024886          194 EVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGI-DCWLWGID  246 (261)
Q Consensus       194 ~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~-~~i~v~~~  246 (261)
                      +.+.+||+|++|..+++++|++|++|++|||+..+|+++|+++|+ .++++.++
T Consensus       171 ~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~  224 (260)
T 2gfh_A          171 EQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKS  224 (260)
T ss_dssp             GSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTT
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCC
Confidence            999999999999999999999999999999954799999999999 78888654

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.95  E-value=2.8e-28  Score=193.23  Aligned_cols=130  Identities=18%  Similarity=0.200  Sum_probs=113.7

Q ss_pred             chHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHH
Q 024886          126 NDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRI  204 (261)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~  204 (261)
                      ..+....+.+.|..   ..++||+.++|+.|++.|++++++||.+.. +...++.+|+..+|+.+++++..+.+||++.+
T Consensus        84 ~~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~  160 (233)
T 3umb_A           84 GNHAEATLMREYAC---LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAA  160 (233)
T ss_dssp             CHHHHHHHHHHHHS---CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHH
T ss_pred             CHHHHHHHHHHHhc---CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHH
Confidence            34455556665644   588999999999999999999999999877 78899999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC--------------CCChHHHHHhhhc
Q 024886          205 FKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID--------------VKTFSDVQNRILI  259 (261)
Q Consensus       205 ~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~--------------~~~~~el~~~l~~  259 (261)
                      |..+++++|++|+++++|||+ .+|+.+|+.+|+.++++.++              ..++.||.++|..
T Consensus       161 ~~~~~~~~~~~~~~~~~vGD~-~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l~~  228 (233)
T 3umb_A          161 YALAPRAFGVPAAQILFVSSN-GWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQA  228 (233)
T ss_dssp             HTHHHHHHTSCGGGEEEEESC-HHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHHHC
T ss_pred             HHHHHHHhCCCcccEEEEeCC-HHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHHHH
Confidence            999999999999999999999 89999999999999998665              4566777777653

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.95  E-value=1.4e-27  Score=191.03  Aligned_cols=186  Identities=19%  Similarity=0.209  Sum_probs=140.8

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHh-----
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEA-----  121 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  121 (261)
                      +.++|+|+||+||||+|+...+..++.++++++|..........   ...+..          ....+.......     
T Consensus        20 ~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~g~~----------~~~~~~~~~~~~~~~~~   86 (243)
T 2hsz_A           20 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVM---TWIGNG----------ADVLSQRAVDWACKQAE   86 (243)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHH---HHCSSC----------HHHHHHHHHHHHHHHHT
T ss_pred             CccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHH---HHhCch----------HHHHHHHHhhhhhcccc
Confidence            55789999999999999988888899999999998743322221   111111          111222221111     


Q ss_pred             cCCCch---HHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCC
Q 024886          122 TGCTND---DYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEV  195 (261)
Q Consensus       122 ~~~~~~---~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~  195 (261)
                      ......   ...+.+.+.|..  .....++||+.++|+.|++.|++++++||.+.. +..+++.+|+..+|+.++++++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~  166 (243)
T 2hsz_A           87 KELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSL  166 (243)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTS
T ss_pred             ccCCHHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccC
Confidence            111111   122223333322  233589999999999999999999999998877 68899999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +..||++..|..+++++|++++++++|||+ .+|+++|+.+|+.++++.++
T Consensus       167 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~a~~aG~~~i~v~~g  216 (243)
T 2hsz_A          167 PEIKPHPAPFYYLCGKFGLYPKQILFVGDS-QNDIFAAHSAGCAVVGLTYG  216 (243)
T ss_dssp             SSCTTSSHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHHTCEEEEESSS
T ss_pred             CCCCcCHHHHHHHHHHhCcChhhEEEEcCC-HHHHHHHHHCCCeEEEEcCC
Confidence            999999999999999999999999999999 79999999999999998775

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.95  E-value=8.4e-27  Score=186.01  Aligned_cols=189  Identities=19%  Similarity=0.260  Sum_probs=139.3

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhC---CCCCHHHHHHHHHHHh--cCCCccccccCCCChhHHHHHHHHhcCC
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYG---LNVDSADIKKGFRKAF--AAPWPEKLRYEGDGRPFWRLVVSEATGC  124 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (261)
                      +|+|+||+||||+|+...+..++.+++++++   ...........+....  ....         ....+..+.....+.
T Consensus         2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~   72 (241)
T 2hoq_A            2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSN---------FPYHFDYLLRRLDLP   72 (241)
T ss_dssp             CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTT---------CTTHHHHHHHHTTCC
T ss_pred             ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchh---------HHHHHHHHHHHhcCC
Confidence            6899999999999998888888888887763   4555544443332111  1000         011122222222122


Q ss_pred             CchHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCC
Q 024886          125 TNDDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPD  201 (261)
Q Consensus       125 ~~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~  201 (261)
                      ........+.+.|...  ....++||+.++|+.|++.|++++++||+... +...++.+|+..+|+.++++++.+..||+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~  152 (241)
T 2hoq_A           73 YNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPH  152 (241)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTC
T ss_pred             ccchHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCC
Confidence            2222222333333221  12468999999999999999999999998877 68899999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCch-hhhHHHHhCCCeEEEECCCCC
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEK-ADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~-~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      +..|..+++++|++|+++++|||+ . +|+++|+.+|+.++++..+..
T Consensus       153 ~~~~~~~~~~~g~~~~~~i~iGD~-~~~Di~~a~~aG~~~~~v~~g~~  199 (241)
T 2hoq_A          153 PKIFKKALKAFNVKPEEALMVGDR-LYSDIYGAKRVGMKTVWFRYGKH  199 (241)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEESC-TTTTHHHHHHTTCEEEEECCSCC
T ss_pred             HHHHHHHHHHcCCCcccEEEECCC-chHhHHHHHHCCCEEEEECCCCC
Confidence            999999999999999999999999 6 999999999999999866643

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.95  E-value=5.7e-27  Score=185.59  Aligned_cols=194  Identities=20%  Similarity=0.248  Sum_probs=137.2

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCCh---hHHHHHHHHhcCCC
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGR---PFWRLVVSEATGCT  125 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  125 (261)
                      ++|+|+||+||||+|+...+...+.++++++|....... ...+.......+...........   .++..+... .+..
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~   80 (235)
T 2om6_A            3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVA-NAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGK-LKVD   80 (235)
T ss_dssp             CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHH-HTCC
T ss_pred             CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHH-HHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHH-hCCC
Confidence            479999999999999988888889999999987643221 11111110000000000000111   233333222 2222


Q ss_pred             chHHHHHHHHHH-hhCCceeeCccHHHHHHHHHHCCCeEEEEeCCc---hH-HHHHHHhcCcccccceEEecCCCCCCCC
Q 024886          126 NDDYFEEVYEYY-AKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFD---TR-LRKLLKDLNVIDLFDAVVISSEVGCEKP  200 (261)
Q Consensus       126 ~~~~~~~~~~~~-~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~---~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp  200 (261)
                      .... ..+.+.+ .......++|++.++|+.|++.|++++++||..   .. +...++.+|+..+|+.++++++.+..||
T Consensus        81 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp  159 (235)
T 2om6_A           81 VELV-KRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKP  159 (235)
T ss_dssp             HHHH-HHHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTT
T ss_pred             HHHH-HHHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCC
Confidence            2121 2222222 222222469999999999999999999999988   66 6888999999999999999999999999


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCch-hhhHHHHhCCCeEEEECCC
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEK-ADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~-~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++..|..+++++|++|+++++|||+ . +|+++|+.+|+.++++.++
T Consensus       160 ~~~~~~~~~~~lgi~~~~~~~iGD~-~~nDi~~a~~aG~~~~~~~~~  205 (235)
T 2om6_A          160 RKEMFEKVLNSFEVKPEESLHIGDT-YAEDYQGARKVGMWAVWINQE  205 (235)
T ss_dssp             CHHHHHHHHHHTTCCGGGEEEEESC-TTTTHHHHHHTTSEEEEECTT
T ss_pred             CHHHHHHHHHHcCCCccceEEECCC-hHHHHHHHHHCCCEEEEECCC
Confidence            9999999999999999999999999 6 9999999999999988665

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.95  E-value=1.3e-27  Score=186.62  Aligned_cols=179  Identities=19%  Similarity=0.275  Sum_probs=139.3

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      |++|+|+||+||||+|+...+..++.++++++|..++.......    .+...          ..+++    .. +....
T Consensus         2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~g~~~----------~~~~~----~~-~~~~~   62 (209)
T 2hdo_A            2 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKT----FPMAA----------EQAMT----EL-GIAAS   62 (209)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHH----TTSCH----------HHHHH----HT-TCCGG
T ss_pred             CcccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHH----cCCcH----------HHHHH----Hc-CCCHH
Confidence            46799999999999999888888999999999887766554332    11110          11111    11 22222


Q ss_pred             HH---HHHHHHHHhh-CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCH
Q 024886          128 DY---FEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       128 ~~---~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~  202 (261)
                      .+   ...+.+.+.. .....++||+.++|+.|+++ ++++++||++.. +..+++.+|+..+|+.++++++.+..||++
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~  141 (209)
T 2hdo_A           63 EFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDP  141 (209)
T ss_dssp             GHHHHHHHHHHHHTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSS
T ss_pred             HHHHHHHHHHHHHhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCc
Confidence            22   2222222221 12368899999999999999 999999998877 788999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      ..|..+++++|++|+++++|||+ .+|+++|+.+|+.++++..+.
T Consensus       142 ~~~~~~~~~~~~~~~~~i~vGD~-~~Di~~a~~aG~~~~~~~~~~  185 (209)
T 2hdo_A          142 LPLLTALEKVNVAPQNALFIGDS-VSDEQTAQAANVDFGLAVWGM  185 (209)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEEEGGGC
T ss_pred             HHHHHHHHHcCCCcccEEEECCC-hhhHHHHHHcCCeEEEEcCCC
Confidence            99999999999999999999999 899999999999999887543

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.95  E-value=2.1e-27  Score=190.60  Aligned_cols=191  Identities=15%  Similarity=0.246  Sum_probs=140.4

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccC---CCChhH----HHHHHH
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE---GDGRPF----WRLVVS  119 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~  119 (261)
                      .|++|+|+||+||||+|+...+...+.++++++|...+.......+...............   ......    ......
T Consensus        19 ~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (254)
T 3umc_A           19 FQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAG   98 (254)
T ss_dssp             SSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH
T ss_pred             ccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHHH
Confidence            5679999999999999998888899999999999987766554433321111000000000   001111    122222


Q ss_pred             HhcCCCchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCC
Q 024886          120 EATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCE  198 (261)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~  198 (261)
                      .............+...+.   ...++|++.++|+.|++. ++++++||.+.. +..+++.+|+.  |+.+++++.++.+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~~~  172 (254)
T 3umc_A           99 EFGLALDEALLQRITGFWH---RLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFGHY  172 (254)
T ss_dssp             HTTCCCCHHHHHHHHGGGG---SCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHTCC
T ss_pred             HhCCCCCHHHHHHHHHHHh---cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccccC
Confidence            2211112233333333332   358899999999999886 999999998877 68889999985  9999999999999


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       199 Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      ||++.+|+.+++++|++|+++++|||+ .+|+++|+.+|+.++++.
T Consensus       173 kp~~~~~~~~~~~lgi~~~~~~~iGD~-~~Di~~a~~aG~~~~~~~  217 (254)
T 3umc_A          173 KPDPQVYLGACRLLDLPPQEVMLCAAH-NYDLKAARALGLKTAFIA  217 (254)
T ss_dssp             TTSHHHHHHHHHHHTCCGGGEEEEESC-HHHHHHHHHTTCEEEEEC
T ss_pred             CCCHHHHHHHHHHcCCChHHEEEEcCc-hHhHHHHHHCCCeEEEEe
Confidence            999999999999999999999999999 899999999999999997

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.95  E-value=8e-28  Score=190.11  Aligned_cols=198  Identities=19%  Similarity=0.246  Sum_probs=139.1

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHH----------HHHhcCCCccccccCCCChhHHHH
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGF----------RKAFAAPWPEKLRYEGDGRPFWRL  116 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  116 (261)
                      |+++|+|+||+||||+|+...+..++..    .+..  .......+          ....+. ...   ...........
T Consensus         2 M~~~k~i~fDlDGTL~d~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~   71 (230)
T 3um9_A            2 MHAIKAVVFDLYGTLYDVYSVRTSCERI----FPGQ--GEMVSKMWRQKQLEYTWMRTLMGQ-YQD---FESATLDALRY   71 (230)
T ss_dssp             CSSCCEEEECSBTTTBCGGGGHHHHHHH----STTC--HHHHHHHHHHHHHHHHHHHHHHTC-CCC---HHHHHHHHHHH
T ss_pred             CCCceEEEEcCCCCcCcchHHHHHHHHH----hccc--HHHHHHHHHHHHHHHHHHHHhhcc-ccC---HHHHHHHHHHH
Confidence            5678999999999999987655433332    2211  11111111          011110 000   00000112222


Q ss_pred             HHHHhcCCCchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCC
Q 024886          117 VVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEV  195 (261)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~  195 (261)
                      ................+.+.|.   ...++||+.++++.|++.|++++++||.+.. +...++.+|+..+|+.+++++..
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  148 (230)
T 3um9_A           72 TCGSLGLALDADGEAHLCSEYL---SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEV  148 (230)
T ss_dssp             HHHHHTCCCCHHHHHHHHHHTT---SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGT
T ss_pred             HHHHcCCCCCHHHHHHHHHHHh---cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhc
Confidence            2222222223444455555552   3588999999999999999999999999877 78899999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC--------------CCChHHHHHhhh
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID--------------VKTFSDVQNRIL  258 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~--------------~~~~~el~~~l~  258 (261)
                      +..||++.+|..+++++|++|+++++|||+ .+|+++|+.+|+.++++.++              ..++.+|.++|.
T Consensus       149 ~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~  224 (230)
T 3um9_A          149 RLFKPHQKVYELAMDTLHLGESEILFVSCN-SWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFS  224 (230)
T ss_dssp             TCCTTCHHHHHHHHHHHTCCGGGEEEEESC-HHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTCC
T ss_pred             ccCCCChHHHHHHHHHhCCCcccEEEEeCC-HHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHHH
Confidence            999999999999999999999999999999 79999999999999998765              345666666654

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.95  E-value=6.9e-27  Score=181.21  Aligned_cols=194  Identities=19%  Similarity=0.227  Sum_probs=147.0

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      |++|+|+||+||||+|+...+...+.++++++|...+..........   .          .....+..+.. ..... .
T Consensus         2 M~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~---~----------~~~~~~~~~~~-~~~~~-~   66 (207)
T 2go7_A            2 MQKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFK---Y----------SVQDLLVRVAE-DRNLD-V   66 (207)
T ss_dssp             --CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH---S----------CHHHHHHHHHH-HHTCC-H
T ss_pred             CcccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHcc---c----------cHHHHHHHhhc-hhhcc-H
Confidence            35799999999999999888888899999999887766554433220   0          01122222211 11111 3


Q ss_pred             HHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHH
Q 024886          128 DYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRI  204 (261)
Q Consensus       128 ~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~  204 (261)
                      .........+...  ....++|++.++++.|++.|++++++||.... .. .++.+|+..+|+.++++++.+..||++..
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~  145 (207)
T 2go7_A           67 EVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEA  145 (207)
T ss_dssp             HHHHHHHHHHHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHH
T ss_pred             HHHHHHHHHHHHhccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHH
Confidence            3333444444332  23578999999999999999999999998876 57 88899999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC-------CCChHHHHHhhh
Q 024886          205 FKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID-------VKTFSDVQNRIL  258 (261)
Q Consensus       205 ~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~-------~~~~~el~~~l~  258 (261)
                      |..+++++|++|+++++|||+ .+|+++|+.+|+.++++.++       ..++.|+.+.|.
T Consensus       146 ~~~~~~~~~i~~~~~~~iGD~-~nDi~~~~~aG~~~i~~~~~~~~a~~v~~~~~el~~~l~  205 (207)
T 2go7_A          146 ATYLLDKYQLNSDNTYYIGDR-TLDVEFAQNSGIQSINFLESTYEGNHRIQALADISRIFE  205 (207)
T ss_dssp             HHHHHHHHTCCGGGEEEEESS-HHHHHHHHHHTCEEEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred             HHHHHHHhCCCcccEEEECCC-HHHHHHHHHCCCeEEEEecCCCCCCEEeCCHHHHHHHHh
Confidence            999999999999999999999 89999999999999999876       345666666553

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.95  E-value=4e-27  Score=186.64  Aligned_cols=181  Identities=23%  Similarity=0.257  Sum_probs=128.1

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcC---CCc
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG---CTN  126 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  126 (261)
                      +|+|+||+||||+|+...+..++.++++++|..++.+....    ..+..          .......+......   ...
T Consensus         2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~g~~----------~~~~~~~~~~~~~~~~~~~~   67 (233)
T 3nas_A            2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNER----LKGIS----------REESLESILIFGGAETKYTN   67 (233)
T ss_dssp             CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHH----TTTCC----------HHHHHHHHHHHTTCTTTSCH
T ss_pred             CcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCHHHHHH----HcCCC----------HHHHHHHHHHHhCCCCCCCH
Confidence            68999999999999988888899999999999876654332    11111          11222222222111   111


Q ss_pred             ---hHHHHHHHHHHh----hCCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCC
Q 024886          127 ---DDYFEEVYEYYA----KGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEK  199 (261)
Q Consensus       127 ---~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~K  199 (261)
                         ..+.....+.+.    ......++||+.++|+.|++.|++++|+||++. ....++.+|+..+|+.++++++.+.+|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~K  146 (233)
T 3nas_A           68 AEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN-APKILRRLAIIDDFHAIVDPTTLAKGK  146 (233)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT-HHHHHHHTTCTTTCSEECCC-------
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh-HHHHHHHcCcHhhcCEEeeHhhCCCCC
Confidence               111222222222    222234899999999999999999999999755 788899999999999999999999999


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |++.+|..+++.+|++|+++++|||+ .+|+++|+.+|+.+++++..
T Consensus       147 p~~~~~~~~~~~lgi~~~~~i~vGDs-~~Di~~a~~aG~~~~~~~~~  192 (233)
T 3nas_A          147 PDPDIFLTAAAMLDVSPADCAAIEDA-EAGISAIKSAGMFAVGVGQG  192 (233)
T ss_dssp             --CCHHHHHHHHHTSCGGGEEEEECS-HHHHHHHHHTTCEEEECC--
T ss_pred             CChHHHHHHHHHcCCCHHHEEEEeCC-HHHHHHHHHcCCEEEEECCc
Confidence            99999999999999999999999999 79999999999999888654

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.95  E-value=2.9e-27  Score=188.47  Aligned_cols=186  Identities=20%  Similarity=0.288  Sum_probs=143.9

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc--
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN--  126 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  126 (261)
                      ++|+|+||+||||+++...+..++.++++++|...+.+....    ..+             .... ..+....+...  
T Consensus        28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~g-------------~~~~-~~~~~~~~~~~~~   89 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQ----FIG-------------PPLH-DTFKEYYKFEDKK   89 (240)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGGGGGG----GSS-------------SCHH-HHHHHTSCCCHHH
T ss_pred             hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHH----HhC-------------ccHH-HHHHHHhCCCHHH
Confidence            479999999999999988888899999999888744332211    111             1111 11122222221  


Q ss_pred             -hHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCH
Q 024886          127 -DDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       127 -~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~  202 (261)
                       ......+.+.+...  ....++||+.++|+.|++.|++++++||+... +..+++.+|+..+|+.+++++..+.+||++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~  169 (240)
T 3sd7_A           90 AKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKN  169 (240)
T ss_dssp             HHHHHHHHHHHHHHTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHH
T ss_pred             HHHHHHHHHHHHHHhcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCH
Confidence             12222233333322  23589999999999999999999999998877 789999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCC-CCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          203 RIFKAALDQMSVE-ASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       203 ~~~~~~~~~l~~~-~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      .+|..+++.+|++ |+++++|||+ .+|+++|+.+|+.++++..+.....++
T Consensus       170 ~~~~~~~~~~g~~~~~~~i~vGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~  220 (240)
T 3sd7_A          170 EVIQYVLDLCNVKDKDKVIMVGDR-KYDIIGAKKIGIDSIGVLYGYGSFEEI  220 (240)
T ss_dssp             HHHHHHHHHHTCCCGGGEEEEESS-HHHHHHHHHHTCEEEEESSSSCCHHHH
T ss_pred             HHHHHHHHHcCCCCCCcEEEECCC-HHHHHHHHHCCCCEEEEeCCCCCHHHH
Confidence            9999999999999 9999999999 799999999999999998876665555

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.95  E-value=6.4e-27  Score=187.43  Aligned_cols=190  Identities=17%  Similarity=0.227  Sum_probs=139.8

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCC---CC----hhHHHHHHH
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEG---DG----RPFWRLVVS  119 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~  119 (261)
                      +|++|+|+||+||||+|+...+...+.++++++|...........+.......+........   ..    .........
T Consensus        12 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (254)
T 3umg_A           12 GRNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFVLR   91 (254)
T ss_dssp             CSBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999988888899999999999877665544332211100000000000   00    111122222


Q ss_pred             HhcCC----CchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC
Q 024886          120 EATGC----TNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE  194 (261)
Q Consensus       120 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~  194 (261)
                      . .+.    ........+...+   ....++||+.++|+.|++. ++++++||.+.. +..+++.+|+.  |+.+++++.
T Consensus        92 ~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~  164 (254)
T 3umg_A           92 E-SGIDPTNHDSGELDELARAW---HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDI  164 (254)
T ss_dssp             H-TTCCGGGSCHHHHHHHHGGG---GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHH
T ss_pred             H-hCCCcCcCCHHHHHHHHHHH---hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCc
Confidence            2 222    1222333333333   2357899999999999997 999999998877 68889999985  999999999


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      .+..||++.+|+.+++++|++|+++++|||+ .+|+++|+.+|+.++++.
T Consensus       165 ~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~-~~Di~~a~~aG~~~~~~~  213 (254)
T 3umg_A          165 NRKYKPDPQAYLRTAQVLGLHPGEVMLAAAH-NGDLEAAHATGLATAFIL  213 (254)
T ss_dssp             HTCCTTSHHHHHHHHHHTTCCGGGEEEEESC-HHHHHHHHHTTCEEEEEC
T ss_pred             CCCCCCCHHHHHHHHHHcCCChHHEEEEeCC-hHhHHHHHHCCCEEEEEe
Confidence            9999999999999999999999999999999 899999999999999997

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.95  E-value=2.7e-27  Score=184.32  Aligned_cols=181  Identities=16%  Similarity=0.197  Sum_probs=134.9

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      +|++|+|+||+||||+++...    +.++++++|...... ....+...              .......         .
T Consensus         3 ~~~~k~iifDlDGTL~d~~~~----~~~~~~~~g~~~~~~-~~~~~~~~--------------~~~~~~~---------~   54 (205)
T 3m9l_A            3 LSEIKHWVFDMDGTLTIAVHD----FAAIREALSIPAEDD-ILTHLAAL--------------PADESAA---------K   54 (205)
T ss_dssp             GGGCCEEEECTBTTTEEEEEC----HHHHHHHTTCCTTSC-HHHHHHHS--------------CHHHHHH---------H
T ss_pred             cccCCEEEEeCCCcCcccHHH----HHHHHHHhCCCchHH-HHHHHhcC--------------ChHHHHH---------H
Confidence            567899999999999998765    446677788775421 11111100              0000000         0


Q ss_pred             hHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc--ceEEecCCCCCCCCCHH
Q 024886          127 DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF--DAVVISSEVGCEKPDPR  203 (261)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f--~~i~~~~~~~~~Kp~~~  203 (261)
                      ..+.....+.+  .....++||+.++|+.|++.|++++++||.... +...++.+|+..+|  +.+++.+. +.+||++.
T Consensus        55 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~~kp~~~  131 (205)
T 3m9l_A           55 HAWLLEHERDL--AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-APPKPHPG  131 (205)
T ss_dssp             HHHHHHTHHHH--EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SCCTTSSH
T ss_pred             HHHHHHHHHHH--hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CCCCCCHH
Confidence            01111111111  123588999999999999999999999998877 78999999999999  78887766 88999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC-----------CCChHHHHHhhhc
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID-----------VKTFSDVQNRILI  259 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~-----------~~~~~el~~~l~~  259 (261)
                      +|..+++++|++|+++++|||+ .+|+++|+.+|+.++++.++           +.++.||.+.+.+
T Consensus       132 ~~~~~~~~~g~~~~~~i~iGD~-~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~  197 (205)
T 3m9l_A          132 GLLKLAEAWDVSPSRMVMVGDY-RFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA  197 (205)
T ss_dssp             HHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence            9999999999999999999999 79999999999999999887           4456666666653

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.95  E-value=2.3e-26  Score=176.66  Aligned_cols=177  Identities=21%  Similarity=0.274  Sum_probs=135.8

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      |++|+|+||+||||+|+...+...+.++++++|..++.......+....                 +.........  ..
T Consensus         4 M~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~--~~   64 (190)
T 2fi1_A            4 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVST-----------------PFAIETFAPN--LE   64 (190)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCH-----------------HHHHHHHCTT--CT
T ss_pred             CcccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHcccc-----------------HHHHHHHhhh--HH
Confidence            4589999999999999988888899999999998877665444322100                 0111111110  11


Q ss_pred             HHHHHHHHHHhh-CCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCCCHHHHH
Q 024886          128 DYFEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFK  206 (261)
Q Consensus       128 ~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~  206 (261)
                      .+.....+.+.. .....++|++.++++.|+++|++++++||....+...++.+|+..+|+.++++++.+.+||++..|+
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~  144 (190)
T 2fi1_A           65 NFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESML  144 (190)
T ss_dssp             THHHHHHHHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHH
T ss_pred             HHHHHHHHHHHHhcCcCccCcCHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHH
Confidence            112222222211 1112489999999999999999999999987667889999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          207 AALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      .+++++|++  ++++|||+ .+|+++|+.+|+.++++.++
T Consensus       145 ~~~~~~~~~--~~~~iGD~-~~Di~~a~~aG~~~~~~~~~  181 (190)
T 2fi1_A          145 YLREKYQIS--SGLVIGDR-PIDIEAGQAAGLDTHLFTSI  181 (190)
T ss_dssp             HHHHHTTCS--SEEEEESS-HHHHHHHHHTTCEEEECSCH
T ss_pred             HHHHHcCCC--eEEEEcCC-HHHHHHHHHcCCeEEEECCC
Confidence            999999998  99999999 79999999999999888664

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.95  E-value=5.6e-26  Score=180.01  Aligned_cols=103  Identities=21%  Similarity=0.293  Sum_probs=97.5

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      ..++||+.++|+.|++.|++++++||++.. +..+++.+|+..+|+.++++++.+.+||++..|..+++++|++|+++++
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  173 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  173 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            588999999999999999999999998877 7889999999999999999999999999999999999999999999999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |||+ .+|+++|+.+|+.++++.++
T Consensus       174 iGD~-~~Di~~a~~aG~~~~~~~~~  197 (232)
T 1zrn_A          174 VASN-AWDATGARYFGFPTCWINRT  197 (232)
T ss_dssp             EESC-HHHHHHHHHHTCCEEEECTT
T ss_pred             EeCC-HHHHHHHHHcCCEEEEEcCC
Confidence            9999 79999999999999988665

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.95  E-value=2.8e-27  Score=187.43  Aligned_cols=190  Identities=19%  Similarity=0.217  Sum_probs=133.4

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchH
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDD  128 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (261)
                      ++++|+||+||||+++.   ...+.+.++++|.+.... ....+...  ..+............++..+.... +.... 
T Consensus        27 ~ik~viFD~DGTL~d~~---~~~~~~~~~~~g~~~~~~-~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~-   98 (229)
T 4dcc_A           27 GIKNLLIDLGGVLINLD---RERCIENFKKIGFQNIEE-KFCTHQLD--GIFLQQEKGLITPAEFRDGIREMM-GKMVS-   98 (229)
T ss_dssp             CCCEEEECSBTTTBCBC---HHHHHHHHHHHTCTTHHH-HHHHTHHH--HHHHHHHTTCSCHHHHHHHHHHHH-TSCCC-
T ss_pred             CCCEEEEeCCCeEEeCC---hHHHHHHHHHhCCCcHHH-HHHHhcCc--HHHHHHHCCCCCHHHHHHHHHHHh-CCCCC-
Confidence            58999999999999976   345667777888863332 22221110  000011111112234444433332 22211 


Q ss_pred             HHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHH---H---HhcCcccccceEEecCCCCCCCCC
Q 024886          129 YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKL---L---KDLNVIDLFDAVVISSEVGCEKPD  201 (261)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~---l---~~~gl~~~f~~i~~~~~~~~~Kp~  201 (261)
                       .+.+.+.+.... ..++||+.++|+.|++. ++++|+||++.. ...+   +   +.+|+..+|+.++++++.+..||+
T Consensus        99 -~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~  175 (229)
T 4dcc_A           99 -DKQIDAAWNSFL-VDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPE  175 (229)
T ss_dssp             -HHHHHHHHHTTB-CCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTC
T ss_pred             -HHHHHHHHHHHH-HhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCC
Confidence             122223333221 25679999999999998 999999998877 5534   3   778999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCCh
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTF  250 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~  250 (261)
                      |.+|+.+++++|++|++|++|||+ .+|+++|+++|+.++++..+....
T Consensus       176 ~~~~~~~~~~~g~~~~~~~~vGD~-~~Di~~a~~aG~~~i~v~~~~~~k  223 (229)
T 4dcc_A          176 PEIFKAVTEDAGIDPKETFFIDDS-EINCKVAQELGISTYTPKAGEDWS  223 (229)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEECSC-HHHHHHHHHTTCEEECCCTTCCGG
T ss_pred             HHHHHHHHHHcCCCHHHeEEECCC-HHHHHHHHHcCCEEEEECCHHHHH
Confidence            999999999999999999999999 799999999999999887765533

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.95  E-value=4e-27  Score=182.51  Aligned_cols=193  Identities=16%  Similarity=0.154  Sum_probs=137.3

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHH-HHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADI-KKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      |++|+|+||+||||+|+.. ....+.++++++|........ ...........       ......++...... .+...
T Consensus         2 M~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~   72 (200)
T 3cnh_A            2 MTIKALFWDIGGVLLTNGW-DREQRADVAQRFGLDTDDFTERHRLAAPELELG-------RMTLAEYLEQVVFY-QPRDF   72 (200)
T ss_dssp             CCCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTT-------SSCHHHHHHHHTTT-SCCSS
T ss_pred             CCceEEEEeCCCeeECCCc-chHHHHHHHHHcCCCHHHHHHHHHhhchHHHcC-------CcCHHHHHHHHHHH-cCCCC
Confidence            3579999999999999764 456788888888876322211 11111111110       00111112221111 11111


Q ss_pred             hHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHH
Q 024886          127 DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIF  205 (261)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~  205 (261)
                      .  .+.+.+.+...  ..++||+.++|+.|+++| +++++||.+.. +...++.+|+..+|+.++++++.+..||+++.|
T Consensus        73 ~--~~~~~~~~~~~--~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~  147 (200)
T 3cnh_A           73 T--PEDFRAVMEEQ--SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMY  147 (200)
T ss_dssp             C--HHHHHHHHHHT--CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHH
T ss_pred             C--HHHHHHHHHhc--CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHH
Confidence            1  11222222222  358999999999999999 99999998877 688899999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          206 KAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       206 ~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      ..+++++|++|+++++|||+ .+|+++|+++|+.++++.++....++|.+
T Consensus       148 ~~~~~~~~~~~~~~~~vgD~-~~Di~~a~~aG~~~~~~~~~~~~~~~l~~  196 (200)
T 3cnh_A          148 RLGLTLAQVRPEEAVMVDDR-LQNVQAARAVGMHAVQCVDAAQLREELAA  196 (200)
T ss_dssp             HHHHHHHTCCGGGEEEEESC-HHHHHHHHHTTCEEEECSCHHHHHHHHHH
T ss_pred             HHHHHHcCCCHHHeEEeCCC-HHHHHHHHHCCCEEEEECCchhhHHHHHH
Confidence            99999999999999999999 79999999999999999877655555543

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.95  E-value=4.4e-27  Score=183.73  Aligned_cols=198  Identities=16%  Similarity=0.198  Sum_probs=139.0

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCcccc-ccCCCChhHHHHHHHHhcCCCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKL-RYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      +++|+|+||+||||+|+.....   ...+.++|..... +...   ...+......+ ........++..+.... +...
T Consensus         3 ~m~k~iiFDlDGTL~d~~~~~~---~~~~~~~g~~~~~-~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~   74 (211)
T 2i6x_A            3 AMIRNIVFDLGGVLIHLNREES---IRRFKAIGVADIE-EMLD---PYLQKGLFLDLESGRKSEEEFRTELSRYI-GKEL   74 (211)
T ss_dssp             CCCSEEEECSBTTTEEECHHHH---HHHHHHTTCTTHH-HHTC---C---CCHHHHHHHSSSCHHHHHHHHHHHH-TSCC
T ss_pred             ccceEEEEeCCCeeEecchHHH---HHHHHHhCCchHH-HHHH---HHhCchHHHHHHcCCCCHHHHHHHHHHHh-CCCC
Confidence            4589999999999999875433   5566677765321 1111   11010000000 00111223333332222 1111


Q ss_pred             hHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh------cCcccccceEEecCCCCCCC
Q 024886          127 DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKD------LNVIDLFDAVVISSEVGCEK  199 (261)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~------~gl~~~f~~i~~~~~~~~~K  199 (261)
                      .  ...+.+.+... ...++||+.++|+.|++ |++++++||++.. +..+++.      +|+..+|+.++++++.+..|
T Consensus        75 ~--~~~~~~~~~~~-~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~K  150 (211)
T 2i6x_A           75 T--YQQVYDALLGF-LEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYK  150 (211)
T ss_dssp             C--HHHHHHHHGGG-EEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCT
T ss_pred             C--HHHHHHHHHHh-hcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCC
Confidence            1  11222223221 24789999999999999 9999999998877 6778888      79999999999999999999


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhhh
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~  258 (261)
                      |++..|..+++++|++|+++++|||+ .+|+++|+++|+.++++..+....+.|.+++.
T Consensus       151 p~~~~~~~~~~~~~~~~~~~~~igD~-~~Di~~a~~aG~~~~~~~~~~~~~~~l~~~l~  208 (211)
T 2i6x_A          151 PNEDIFLEMIADSGMKPEETLFIDDG-PANVATAERLGFHTYCPDNGENWIPAITRLLR  208 (211)
T ss_dssp             TSHHHHHHHHHHHCCCGGGEEEECSC-HHHHHHHHHTTCEEECCCTTCCCHHHHHHHHT
T ss_pred             CCHHHHHHHHHHhCCChHHeEEeCCC-HHHHHHHHHcCCEEEEECCHHHHHHHHHHHHh
Confidence            99999999999999999999999999 79999999999999999888887777777764

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.94  E-value=5.8e-26  Score=183.52  Aligned_cols=102  Identities=13%  Similarity=0.200  Sum_probs=94.1

Q ss_pred             ceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh---cCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024886          142 AWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKD---LNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       142 ~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~---~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ...++||+.++|+.|+++|++++|+||++.. ++.+++.   .|+..+|+.++++ +++ +||+|.+|..+++++|++|+
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~  205 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCSTN  205 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGG
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCcc
Confidence            3689999999999999999999999999887 6777774   4699999999999 888 99999999999999999999


Q ss_pred             cEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          218 RTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       218 ~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +|++|||+ .+|+++|+++|+.++++.++
T Consensus       206 ~~l~VgDs-~~di~aA~~aG~~~i~v~~~  233 (261)
T 1yns_A          206 NILFLTDV-TREASAAEEADVHVAVVVRP  233 (261)
T ss_dssp             GEEEEESC-HHHHHHHHHTTCEEEEECCT
T ss_pred             cEEEEcCC-HHHHHHHHHCCCEEEEEeCC
Confidence            99999999 89999999999999999764

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.94  E-value=1.8e-25  Score=178.07  Aligned_cols=113  Identities=24%  Similarity=0.349  Sum_probs=102.2

Q ss_pred             HHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHH
Q 024886          130 FEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAA  208 (261)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~  208 (261)
                      .+.+.+.|..   ..++||+.++|+.|+++|++++++||++.. +..+++.+|+..+|+.++++++.+..||++..|..+
T Consensus        94 ~~~~~~~~~~---~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~  170 (240)
T 2no4_A           94 KDRLMSAYKE---LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFA  170 (240)
T ss_dssp             HHHHHHHHHT---CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHH
T ss_pred             HHHHHHHHhc---CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHH
Confidence            4444444543   578999999999999999999999998877 788999999999999999999999999999999999


Q ss_pred             HHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          209 LDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       209 ~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++++|++|+++++|||+ .+|+++|+.+|+.++++..+
T Consensus       171 ~~~~~~~~~~~~~iGD~-~~Di~~a~~aG~~~~~v~~~  207 (240)
T 2no4_A          171 CDRLGVNPNEVCFVSSN-AWDLGGAGKFGFNTVRINRQ  207 (240)
T ss_dssp             HHHHTCCGGGEEEEESC-HHHHHHHHHHTCEEEEECTT
T ss_pred             HHHcCCCcccEEEEeCC-HHHHHHHHHCCCEEEEECCC
Confidence            99999999999999999 89999999999999998665

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.94  E-value=1.1e-25  Score=178.31  Aligned_cols=193  Identities=23%  Similarity=0.312  Sum_probs=131.7

Q ss_pred             cccEEEEccCCccccccccHHH---HHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCC-----ChhHHHHHHHH
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEE---TYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD-----GRPFWRLVVSE  120 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  120 (261)
                      |+|+|+||+||||+|+...+..   .+.+.+++.|++  .......+.......+.........     ....+..+...
T Consensus         1 Mik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   78 (234)
T 3u26_A            1 MIRAVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLN--PKTLLDEYEKLTREAFSNYAGKPYRPLRDILEEVMRKLAEK   78 (234)
T ss_dssp             CCCEEEECSTTTTBCHHHHHHHHHHHHHHHCSSSSSC--HHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEcCCCccccccchhHHHHHHHHHHHhhcCCC--HHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHH
Confidence            3789999999999998754333   344444444543  3333322222111100000000000     01122333332


Q ss_pred             hcCCCchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCC
Q 024886          121 ATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEK  199 (261)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~K  199 (261)
                      ........+.....+.+..  ...++||+.++|+.|++. ++++++||.+.. +...++.+|+..+|+.+++++..+..|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~k  155 (234)
T 3u26_A           79 YGFKYPENFWEISLRMSQR--YGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFK  155 (234)
T ss_dssp             HTCCCCTTHHHHHHHHHHH--HCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCT
T ss_pred             cCchHHHHHHHHHHHHHHh--hCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCC
Confidence            2222223333322222222  147889999999999999 999999999877 788999999999999999999999999


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |++.+|+.+++++|++|+++++|||+..+|+++|+.+|+.++++..+
T Consensus       156 p~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~  202 (234)
T 3u26_A          156 PHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK  202 (234)
T ss_dssp             TSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS
T ss_pred             cCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC
Confidence            99999999999999999999999999339999999999999998766

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.94  E-value=9e-26  Score=178.18  Aligned_cols=184  Identities=17%  Similarity=0.258  Sum_probs=138.2

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      +++|+|+||+||||+++...+...+.++++++|...+.......+   .+.          .....+..+..........
T Consensus         2 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~g~----------~~~~~~~~~~~~~~~~~~~   68 (229)
T 2fdr_A            2 SGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERF---AGM----------TWKNILLQVESEASIPLSA   68 (229)
T ss_dssp             -CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHH---TTC----------CHHHHHHHHHHHHCCCCCT
T ss_pred             CCccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHH---hCC----------CHHHHHHHHHHHcCCCCCH
Confidence            357999999999999998888888999999999887643322211   111          1123333333332222122


Q ss_pred             HHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc-ceEEecCCCCCC--CCC
Q 024886          128 DYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF-DAVVISSEVGCE--KPD  201 (261)
Q Consensus       128 ~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f-~~i~~~~~~~~~--Kp~  201 (261)
                      .....+.+.+...  ....++||+.++++.|+.   +++++||.... +...++.+|+..+| +.+++++..+.+  ||+
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk  145 (229)
T 2fdr_A           69 SLLDKSEKLLDMRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPK  145 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTS
T ss_pred             HHHHHHHHHHHHHhhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcC
Confidence            3333333333211  124788999999988874   89999998876 78899999999999 999999888889  999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      +..|..+++++|++|+++++|||+ .+|+++|+.+|+.++++.++..
T Consensus       146 ~~~~~~~~~~l~~~~~~~i~iGD~-~~Di~~a~~aG~~~i~~~~~~~  191 (229)
T 2fdr_A          146 PDIFLHGAAQFGVSPDRVVVVEDS-VHGIHGARAAGMRVIGFTGASH  191 (229)
T ss_dssp             SHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHTTCEEEEECCSTT
T ss_pred             HHHHHHHHHHcCCChhHeEEEcCC-HHHHHHHHHCCCEEEEEecCCc
Confidence            999999999999999999999999 7999999999999999988755

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.94  E-value=1.1e-25  Score=178.25  Aligned_cols=189  Identities=18%  Similarity=0.133  Sum_probs=136.6

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHH-hCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARK-YGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      |++|+|+||+||||+|+...+..++.+++++ +|...+ ....    ...+.          .....+..++.. .+...
T Consensus         2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~-~~~~----~~~g~----------~~~~~~~~~~~~-~~~~~   65 (234)
T 2hcf_A            2 MSRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS-TGSH----DFSGK----------MDGAIIYEVLSN-VGLER   65 (234)
T ss_dssp             -CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC-C-------CCTTC----------CHHHHHHHHHHT-TTCCH
T ss_pred             CcceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCc-cchh----hhcCC----------ChHHHHHHHHHH-cCCCc
Confidence            3579999999999999998888889988888 687654 1111    00000          011112222221 12211


Q ss_pred             -------hHHHHHHHHHHhhC---CceeeCccHHHHHHHHHHC-CCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC
Q 024886          127 -------DDYFEEVYEYYAKG---EAWHLPHGAYQSILLLKDA-GVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE  194 (261)
Q Consensus       127 -------~~~~~~~~~~~~~~---~~~~~~~g~~~~l~~L~~~-g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~  194 (261)
                             ..+...+.+.+...   ....++||+.++|+.|++. |++++|+||+... +...++.+|+..+|+.++++++
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~  145 (234)
T 2hcf_A           66 AEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADD  145 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTT
T ss_pred             ccchhHHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCC
Confidence                   12222222332211   3368899999999999999 9999999998877 6889999999999998777766


Q ss_pred             CC-CCCCCHHHHHHHHHHcC--CCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          195 VG-CEKPDPRIFKAALDQMS--VEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       195 ~~-~~Kp~~~~~~~~~~~l~--~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      .. .+||.+.+|+.+++++|  ++|++|++|||+ .+|+++|+.+|+.++++.++.....++
T Consensus       146 ~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~-~~Di~~a~~aG~~~i~v~~~~~~~~~~  206 (234)
T 2hcf_A          146 ALDRNELPHIALERARRMTGANYSPSQIVIIGDT-EHDIRCARELDARSIAVATGNFTMEEL  206 (234)
T ss_dssp             CSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESS-HHHHHHHHTTTCEEEEECCSSSCHHHH
T ss_pred             CcCccchHHHHHHHHHHHhCCCCCcccEEEECCC-HHHHHHHHHCCCcEEEEcCCCCCHHHH
Confidence            54 45688899999999999  999999999999 799999999999999998875554444

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.94  E-value=1.4e-25  Score=176.25  Aligned_cols=186  Identities=20%  Similarity=0.243  Sum_probs=137.9

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCC-CHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNV-DSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      |++|+|+||+||||+|+...+...+.++++++|... +......    ..+..          ....    .....+...
T Consensus         4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~g~~----------~~~~----~~~~~~~~~   65 (225)
T 3d6j_A            4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKR----TIGKT----------LEES----FSILTGITD   65 (225)
T ss_dssp             -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHT----TTTSC----------HHHH----HHHHHCCCC
T ss_pred             CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHH----HhCCc----------HHHH----HHHHcCCCC
Confidence            468999999999999998888888999999988763 3332221    11110          0111    111111111


Q ss_pred             hH----HHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCC
Q 024886          127 DD----YFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEK  199 (261)
Q Consensus       127 ~~----~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~K  199 (261)
                      ..    +.......+..  .....++|++.++++.|++.|++++++|+.... +...++.+|+..+|+.+++++..+..|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  145 (225)
T 3d6j_A           66 ADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHK  145 (225)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCT
T ss_pred             HHHHHHHHHHHHHHHHHhccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCC
Confidence            11    11122222211  123578999999999999999999999998876 688899999999999999999888999


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHH
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~e  252 (261)
                      |++..|..+++++|++++++++|||+ .+|++||+.+|+.++++.++.....+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~i~iGD~-~nDi~~~~~aG~~~~~~~~~~~~~~~  197 (225)
T 3d6j_A          146 PDPEGLLLAIDRLKACPEEVLYIGDS-TVDAGTAAAAGVSFTGVTSGMTTAQE  197 (225)
T ss_dssp             TSTHHHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEEETTSSCCTTG
T ss_pred             CChHHHHHHHHHhCCChHHeEEEcCC-HHHHHHHHHCCCeEEEECCCCCChHH
Confidence            99999999999999999999999999 79999999999999998776443333

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=4.9e-25  Score=174.04  Aligned_cols=191  Identities=17%  Similarity=0.160  Sum_probs=130.2

Q ss_pred             ccc-ccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCC-Chh----HHHHHHHH
Q 024886           47 KKA-YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD-GRP----FWRLVVSE  120 (261)
Q Consensus        47 ~~~-~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~  120 (261)
                      |++ +|+|+||+||||+++...+..++..+.+.+...-........+.......    ....+. ...    +.......
T Consensus         4 M~~mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~   79 (234)
T 3ddh_A            4 MKELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNN----LQILGYGAKAFTISMVETALQI   79 (234)
T ss_dssp             CTTTCCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHT----HHHHCSSHHHHHHHHHHHHHHH
T ss_pred             hhhcccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh----hhhhcCCcchhHHHHHHHHHHH
Confidence            344 89999999999999988777776655554322213333332221110000    000011 111    11221111


Q ss_pred             hcCCCchHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCC-CeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC
Q 024886          121 ATGCTNDDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAG-VKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG  196 (261)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g-~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~  196 (261)
                      .......+....+.+.+..  .....++||+.++++.|++.| ++++++||.+.. +...++.+|+..+|+.++++    
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~----  155 (234)
T 3ddh_A           80 SNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM----  155 (234)
T ss_dssp             TTTCCCHHHHHHHHHHHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE----
T ss_pred             hcCCCCHHHHHHHHHHHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec----
Confidence            1122233444444444433  223578999999999999999 999999998876 68899999999999998864    


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                       .||++.+|+.+++++|++|+++++|||+..+|+++|+.+|+.++++.++
T Consensus       156 -~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~  204 (234)
T 3ddh_A          156 -SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFE  204 (234)
T ss_dssp             -SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCC
T ss_pred             -CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCC
Confidence             5899999999999999999999999999339999999999999998444

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.94  E-value=4.5e-25  Score=173.10  Aligned_cols=180  Identities=24%  Similarity=0.291  Sum_probs=133.8

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCC-CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcC-CCch
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLN-VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG-CTND  127 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  127 (261)
                      +|+|+||+||||+|+...+...+.++++++|.. ++......    ..+.          .....+..+...... ....
T Consensus         2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~g~----------~~~~~~~~~~~~~~~~~~~~   67 (221)
T 2wf7_A            2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQ----LKGV----------SREDSLQKILDLADKKVSAE   67 (221)
T ss_dssp             CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHHTT----TTTC----------CHHHHHHHHHHHTTCCCCHH
T ss_pred             CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHHHH----hCCC----------CHHHHHHHHHHHhCCCCChH
Confidence            689999999999999888888899999998877 54432211    1110          111222222222110 1111


Q ss_pred             ---HHHHHHHHHHhh----CCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCC
Q 024886          128 ---DYFEEVYEYYAK----GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKP  200 (261)
Q Consensus       128 ---~~~~~~~~~~~~----~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp  200 (261)
                         .+.....+.|..    .....++|++.++++.|++.|++++++||. ......++.+|+..+|+.++++++.+..||
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp  146 (221)
T 2wf7_A           68 EFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS-KNGPFLLERMNLTGYFDAIADPAEVAASKP  146 (221)
T ss_dssp             HHHHHHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC-TTHHHHHHHTTCGGGCSEECCTTTSSSCTT
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc-HHHHHHHHHcChHHHcceEeccccCCCCCC
Confidence               122222222221    123478899999999999999999999998 446778899999999999999999999999


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECC
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGI  245 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~  245 (261)
                      ++..|+.+++++|++|+++++|||+ .+|++||+.+|+.++.++.
T Consensus       147 ~~~~~~~~~~~lgi~~~~~i~iGD~-~nDi~~a~~aG~~~~~~~~  190 (221)
T 2wf7_A          147 APDIFIAAAHAVGVAPSESIGLEDS-QAGIQAIKDSGALPIGVGR  190 (221)
T ss_dssp             SSHHHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEEESC
T ss_pred             ChHHHHHHHHHcCCChhHeEEEeCC-HHHHHHHHHCCCEEEEECC
Confidence            9999999999999999999999999 7999999999999988753

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.93  E-value=2.3e-25  Score=180.21  Aligned_cols=195  Identities=15%  Similarity=0.189  Sum_probs=136.9

Q ss_pred             ccccEEEEccCCccccccc-cHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCC--
Q 024886           48 KAYDAVLLDAGGTLLQLAE-PVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGC--  124 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  124 (261)
                      |++|+|+||+||||+|+.. .+...+.++++++|+.++......    ..+...................+ ....+.  
T Consensus         4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   78 (267)
T 1swv_A            4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARK----PMGLLKIDHVRALTEMPRIASEW-NRVFRQLP   78 (267)
T ss_dssp             -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHT----TTTSCHHHHHHHHHHSHHHHHHH-HHHHSSCC
T ss_pred             CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHHHHHH----HhccchHHHHHHhcccHHHHHHH-HHHhCCCC
Confidence            4689999999999999887 678889999999998765543321    11111000000000000011111 111111  


Q ss_pred             Cch---HHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc-ceEEecCCCCC
Q 024886          125 TND---DYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF-DAVVISSEVGC  197 (261)
Q Consensus       125 ~~~---~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f-~~i~~~~~~~~  197 (261)
                      ...   .+...+.+.+..  .....++||+.++++.|++.|++++++||.... +..+++.+|+..+| +.+++++..+.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  158 (267)
T 1swv_A           79 TEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA  158 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC
T ss_pred             CHHHHHHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCC
Confidence            111   112222222211  122478899999999999999999999998876 68888888888886 99999998899


Q ss_pred             CCCCHHHHHHHHHHcCCCC-CcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          198 EKPDPRIFKAALDQMSVEA-SRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~-~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      +||++..|..+++++|+++ +++++|||+ .+|+++|+.+|+.++++..+..
T Consensus       159 ~kp~~~~~~~~~~~lgi~~~~~~i~iGD~-~nDi~~a~~aG~~~i~v~~~~~  209 (267)
T 1swv_A          159 GRPYPWMCYKNAMELGVYPMNHMIKVGDT-VSDMKEGRNAGMWTVGVILGSS  209 (267)
T ss_dssp             CTTSSHHHHHHHHHHTCCSGGGEEEEESS-HHHHHHHHHTTSEEEEECTTCT
T ss_pred             CCCCHHHHHHHHHHhCCCCCcCEEEEeCC-HHHHHHHHHCCCEEEEEcCCCC
Confidence            9999999999999999999 999999999 7999999999999999887654

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.93  E-value=1.9e-24  Score=173.67  Aligned_cols=100  Identities=22%  Similarity=0.263  Sum_probs=95.0

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      ..++||+.++|+.|+  |++++++||++.. +..+++.+|+..+|+.++++++.+.+||++..|..+++++|++|++|++
T Consensus        92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  169 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (253)
T ss_dssp             CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            578999999999999  8999999999877 6889999999999999999999999999999999999999999999999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGI  245 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~  245 (261)
                      |||+ .+|+++|+++|+.++++..
T Consensus       170 vGD~-~~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          170 VSSN-GFDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             EESC-HHHHHHHHHHTCEEEEECC
T ss_pred             EeCC-hhhHHHHHHCCCEEEEECC
Confidence            9999 8999999999999999876

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.93  E-value=8.4e-25  Score=178.53  Aligned_cols=186  Identities=16%  Similarity=0.188  Sum_probs=130.2

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHh---CCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCC
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKY---GLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGC  124 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (261)
                      .++|+|+||+||||+++...+...+.+.+.++   +..++...........+...          +.. ...+. ...+.
T Consensus        55 ~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~-~~~~~-~~~~~  122 (282)
T 3nuq_A           55 PNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEY----------GLA-IRGLV-MFHKV  122 (282)
T ss_dssp             CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHT----------HHH-HHHHH-HTTSS
T ss_pred             CCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH----------hhh-HHHHH-HHcCC
Confidence            36799999999999998877777666666653   33344443332221111000          000 01111 11222


Q ss_pred             CchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCC--eEEEEeCCchH-HHHHHHhcCcccccceEEecCCC----CC
Q 024886          125 TNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGV--KVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEV----GC  197 (261)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~--~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~----~~  197 (261)
                      ....+...+...........++||+.++|+.|++.|+  +++|+||+... +...++.+|+..+|+.+++++..    ..
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~  202 (282)
T 3nuq_A          123 NALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLV  202 (282)
T ss_dssp             CHHHHHHHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCC
T ss_pred             CHHHHHHHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccC
Confidence            2222222221111111225789999999999999999  99999998877 78899999999999999988654    56


Q ss_pred             CCCCHHHHHHHHHHcCCCC-CcEEEEcCCchhhhHHHHhCCC-eEEEECCC
Q 024886          198 EKPDPRIFKAALDQMSVEA-SRTVHIGDDEKADKQGANSLGI-DCWLWGID  246 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~-~~~l~iGD~~~~Di~~a~~~G~-~~i~v~~~  246 (261)
                      +||++.+|+.+++++|++| +++++|||+ .+|+++|+.+|+ .++++..+
T Consensus       203 ~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~-~~Di~~a~~aG~~~~~~~~~~  252 (282)
T 3nuq_A          203 CKPHVKAFEKAMKESGLARYENAYFIDDS-GKNIETGIKLGMKTCIHLVEN  252 (282)
T ss_dssp             CTTSHHHHHHHHHHHTCCCGGGEEEEESC-HHHHHHHHHHTCSEEEEECSC
T ss_pred             CCcCHHHHHHHHHHcCCCCcccEEEEcCC-HHHHHHHHHCCCeEEEEEcCC
Confidence            7999999999999999999 999999999 799999999999 56677655

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.93  E-value=6.1e-25  Score=172.73  Aligned_cols=183  Identities=16%  Similarity=0.211  Sum_probs=136.4

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCC-hhHHHHHHHHhcCC---
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDG-RPFWRLVVSEATGC---  124 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---  124 (261)
                      ++|+|+||+||||+++...+...+.++++++|.........       .       ...+.. ......+... .+.   
T Consensus         8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~-------~~~g~~~~~~~~~~~~~-~~~~~~   72 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNEL-------P-------DTLGLRIDMVVDLWYAR-QPWNGP   72 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGS-------C-------CCTTCCHHHHHHHHHHH-SCCSSS
T ss_pred             CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHH-------H-------HHhCCCHHHHHHHHHHH-cCCCcc
Confidence            47999999999999998888888888888888764311000       0       001111 1222222221 111   


Q ss_pred             CchHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCC
Q 024886          125 TNDDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPD  201 (261)
Q Consensus       125 ~~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~  201 (261)
                      ........+.+.+...  ....++|++.++++.|++.|++++++||.... +...++.+|+..+|+.+++++..+..||+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~  152 (226)
T 1te2_A           73 SRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPH  152 (226)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTS
T ss_pred             CHHHHHHHHHHHHHHHHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCC
Confidence            2223333332222211  12478899999999999999999999998876 68889999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +..++.+++.+|++++++++|||+ .+|+++|+.+|++++++.++.
T Consensus       153 ~~~~~~~~~~~~i~~~~~i~iGD~-~nDi~~a~~aG~~~~~~~~~~  197 (226)
T 1te2_A          153 PQVYLDCAAKLGVDPLTCVALEDS-VNGMIASKAARMRSIVVPAPE  197 (226)
T ss_dssp             THHHHHHHHHHTSCGGGEEEEESS-HHHHHHHHHTTCEEEECCCTT
T ss_pred             hHHHHHHHHHcCCCHHHeEEEeCC-HHHHHHHHHcCCEEEEEcCCC
Confidence            999999999999999999999999 799999999999999887663

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.93  E-value=1.5e-25  Score=177.06  Aligned_cols=189  Identities=20%  Similarity=0.302  Sum_probs=127.3

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHH---HhCCCC---CHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHH--
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIAR---KYGLNV---DSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSE--  120 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  120 (261)
                      |+|+|+||+||||+++...+..+...+.+   +.+...   +................    ........+.......  
T Consensus         1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~   76 (230)
T 3vay_A            1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDP----SFKHRISALRRRVLFHAL   76 (230)
T ss_dssp             CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCG----GGGGCHHHHHHHHHHHHH
T ss_pred             CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCc----cccccHHHHHHHHHHHHH
Confidence            47899999999999988766655444433   334332   22222221111111100    0001111111111111  


Q ss_pred             -hcCCCch---HHHHHHHHHHhh-CCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCC
Q 024886          121 -ATGCTND---DYFEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEV  195 (261)
Q Consensus       121 -~~~~~~~---~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~  195 (261)
                       ..+....   .+.....+.+.. .....++||+.++|+.|++. ++++++||.+..    ++.+|+..+|+.+++++..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~----l~~~~l~~~f~~~~~~~~~  151 (230)
T 3vay_A           77 EDAGYDSDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD----VRRLGLADYFAFALCAEDL  151 (230)
T ss_dssp             HTTTCCHHHHHHHHHHHHHHHHHHHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC----GGGSTTGGGCSEEEEHHHH
T ss_pred             HHhCCChhhhHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHhC-CeEEEEECCchh----hhhcCcHHHeeeeEEcccc
Confidence             1222211   222333333222 22357899999999999998 999999998765    7788999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +.+||++.+|+.+++++|++|+++++|||+..+|+++|+.+|+.++++.++
T Consensus       152 ~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~  202 (230)
T 3vay_A          152 GIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQ  202 (230)
T ss_dssp             TCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred             CCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCC
Confidence            999999999999999999999999999999339999999999999998776

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.93  E-value=5.9e-26  Score=176.55  Aligned_cols=195  Identities=20%  Similarity=0.199  Sum_probs=130.3

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCcc-ccccCCCChhHHHHHHHHhcCCC
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPE-KLRYEGDGRPFWRLVVSEATGCT  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  125 (261)
                      ++++|+|+||+||||+|+..   ..+...+.++|.... .+...   ...+..... ..........++..+..... ..
T Consensus         4 ~~~~k~viFDlDGTL~d~~~---~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~   75 (206)
T 2b0c_A            4 KEAKMLYIFDLGNVIVDIDF---NRVLGAWSDLTRIPL-ASLKK---SFHMGEAFHQHERGEISDEAFAEALCHEMA-LP   75 (206)
T ss_dssp             --CCCEEEECCBTTTEEEET---HHHHHHHHHHHCCCH-HHHHH---HCCCCHHHHHHHTTCSCHHHHHHHHHHHHT-CC
T ss_pred             cccccEEEEcCCCeeecCcH---HHHHHHHHHhcCCCH-HHHHH---HHhcccHHHHHhcCCCCHHHHHHHHHHHhC-CC
Confidence            45689999999999999862   233444555554422 22111   111100000 00011112233333322222 11


Q ss_pred             chHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh-cCcccccceEEecCCCCCCCCCHH
Q 024886          126 NDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKD-LNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      ..  ...+.+.+... ...++||+.++|+.|++.|++++++||++.. +..+++. +|+..+|+.++++++.+..||+++
T Consensus        76 ~~--~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~  152 (206)
T 2b0c_A           76 LS--YEQFSHGWQAV-FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEAR  152 (206)
T ss_dssp             CC--HHHHHHHHHTC-EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHH
T ss_pred             CC--HHHHHHHHHHH-hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHH
Confidence            11  12233333322 2588999999999999999999999998766 4556666 788899999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      .|..+++++|++++++++|||+ .+|+++|+++|+.++++..+....+.|
T Consensus       153 ~~~~~~~~~~~~~~~~~~vgD~-~~Di~~a~~aG~~~~~~~~~~~~~~~l  201 (206)
T 2b0c_A          153 IYQHVLQAEGFSPSDTVFFDDN-ADNIEGANQLGITSILVKDKTTIPDYF  201 (206)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESC-HHHHHHHHTTTCEEEECCSTTHHHHHH
T ss_pred             HHHHHHHHcCCCHHHeEEeCCC-HHHHHHHHHcCCeEEEecCCchHHHHH
Confidence            9999999999999999999999 799999999999999987765433333

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.93  E-value=1.7e-24  Score=167.88  Aligned_cols=108  Identities=17%  Similarity=0.273  Sum_probs=97.1

Q ss_pred             HHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHH
Q 024886          131 EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL  209 (261)
Q Consensus       131 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~  209 (261)
                      +.+.+.|..   ..++||+.+ |+.|++. ++++|+||.+.. +..+++.+|+..+|+.++++++.+..||++++|..++
T Consensus        64 ~~~~~~~~~---~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~  138 (201)
T 2w43_A           64 DEELNKWKN---LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFL  138 (201)
T ss_dssp             HHHHHHHHT---CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHH
T ss_pred             HHHHHhhcc---cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHH
Confidence            444444543   589999999 9999999 999999998876 7889999999999999999999999999999999999


Q ss_pred             HHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          210 DQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       210 ~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +++|  |+++++|||+ .+|+++|+++|+.++++.++
T Consensus       139 ~~~~--~~~~~~vGD~-~~Di~~a~~aG~~~~~~~~~  172 (201)
T 2w43_A          139 DSIG--AKEAFLVSSN-AFDVIGAKNAGMRSIFVNRK  172 (201)
T ss_dssp             HHHT--CSCCEEEESC-HHHHHHHHHTTCEEEEECSS
T ss_pred             HhcC--CCcEEEEeCC-HHHhHHHHHCCCEEEEECCC
Confidence            9999  9999999999 79999999999999988664

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.93  E-value=1.9e-24  Score=173.43  Aligned_cols=182  Identities=16%  Similarity=0.162  Sum_probs=128.4

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHH---HhCCCC---CHHHH-HHHHH--HHhcCCCccccccCCCChhHHHHHH
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIAR---KYGLNV---DSADI-KKGFR--KAFAAPWPEKLRYEGDGRPFWRLVV  118 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~---~~g~~~---~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  118 (261)
                      |++|+|+||+||||+|+...+..++.++++   ++|...   ....+ ...+.  ...+..          ...+...+.
T Consensus        11 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~   80 (251)
T 2pke_A           11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYG----------AKGMTLSMI   80 (251)
T ss_dssp             CSCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSS----------HHHHHHHHH
T ss_pred             CceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCc----------chHHHHHHH
Confidence            468999999999999998888888887774   566653   11100 00111  011111          111112111


Q ss_pred             H---HhcCC-CchHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEe
Q 024886          119 S---EATGC-TNDDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVI  191 (261)
Q Consensus       119 ~---~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~  191 (261)
                      .   ..... ........+.+.|..  .....++||+.++|+.|+ .|++++++||+... +...++.+|+..+|+.+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~  159 (251)
T 2pke_A           81 ETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEV  159 (251)
T ss_dssp             HHHHHHTTTCCCHHHHHHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEE
T ss_pred             HHHHHhcCCCCChHHHHHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeee
Confidence            1   11121 122333444333322  233578999999999999 89999999998876 7888999999999998887


Q ss_pred             cCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCch-hhhHHHHhCCCeEEEECCC
Q 024886          192 SSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEK-ADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       192 ~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~-~Di~~a~~~G~~~i~v~~~  246 (261)
                      +     .||++..|..+++++|++|+++++|||+ . +|+++|+.+|+.++++.++
T Consensus       160 ~-----~kp~~~~~~~~~~~l~~~~~~~i~iGD~-~~~Di~~a~~aG~~~~~v~~~  209 (251)
T 2pke_A          160 V-----SEKDPQTYARVLSEFDLPAERFVMIGNS-LRSDVEPVLAIGGWGIYTPYA  209 (251)
T ss_dssp             E-----SCCSHHHHHHHHHHHTCCGGGEEEEESC-CCCCCHHHHHTTCEEEECCCC
T ss_pred             e-----CCCCHHHHHHHHHHhCcCchhEEEECCC-chhhHHHHHHCCCEEEEECCC
Confidence            3     5899999999999999999999999999 7 9999999999999988554

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.93  E-value=6.5e-25  Score=168.95  Aligned_cols=105  Identities=29%  Similarity=0.444  Sum_probs=97.5

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch---H-HHHHHHhcCcccccceEEecCCC----CCCCCCHHHHHHHHHHcCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT---R-LRKLLKDLNVIDLFDAVVISSEV----GCEKPDPRIFKAALDQMSV  214 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~---~-~~~~l~~~gl~~~f~~i~~~~~~----~~~Kp~~~~~~~~~~~l~~  214 (261)
                      ..++||+.++|+.|++.|++++|+||++.   . +...++.+|+..+|+.++++++.    +..||++.+|..+++++|+
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~  112 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQI  112 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTC
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCC
Confidence            48999999999999999999999999875   4 78999999999999999999876    7889999999999999999


Q ss_pred             CCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          215 EASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       215 ~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +|+++++|||++.+|+++|+++|+.++++.++.
T Consensus       113 ~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~  145 (189)
T 3ib6_A          113 DKTEAVMVGNTFESDIIGANRAGIHAIWLQNPE  145 (189)
T ss_dssp             CGGGEEEEESBTTTTHHHHHHTTCEEEEECCTT
T ss_pred             CcccEEEECCCcHHHHHHHHHCCCeEEEECCcc
Confidence            999999999985699999999999999997763

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.92  E-value=2.1e-24  Score=175.63  Aligned_cols=182  Identities=14%  Similarity=0.142  Sum_probs=134.0

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      .|++|+|+||+||||+|+...+...+.++++++|. .+......   ...+...          ......+..   ....
T Consensus        32 ~m~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~~~~~~~~---~~~G~~~----------~~~~~~~~~---~~~~   94 (275)
T 2qlt_A           32 SLKINAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FDAEHVIH---ISHGWRT----------YDAIAKFAP---DFAD   94 (275)
T ss_dssp             EEEESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-CCHHHHHH---HCTTCCH----------HHHHHHHCG---GGCC
T ss_pred             cccCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-CCHHHHHH---HhcCCCH----------HHHHHHHhc---cCCc
Confidence            34689999999999999988888888888888773 33332221   1111100          111111111   0111


Q ss_pred             hHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHC-CCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCH
Q 024886          127 DDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDA-GVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       127 ~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~-g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~  202 (261)
                      ......+.+.+..  .....++||+.++|+.|++. |++++++||.... +...++.+|+. .|+.++++++.+.+||++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~  173 (275)
T 2qlt_A           95 EEYVNKLEGEIPEKYGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQGKPHP  173 (275)
T ss_dssp             HHHHHHHHHTHHHHHCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSSCTTSS
T ss_pred             HHHHHHHHHHHHHHHhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCCCCCCh
Confidence            2222232222221  22357899999999999999 9999999998876 68889999886 589999999889999999


Q ss_pred             HHHHHHHHHcCC-------CCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          203 RIFKAALDQMSV-------EASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       203 ~~~~~~~~~l~~-------~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +.|..+++.+|+       +|++|++|||+ .+|+++|+.+|+.++++..+.
T Consensus       174 ~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs-~nDi~~a~~AG~~~i~v~~~~  224 (275)
T 2qlt_A          174 EPYLKGRNGLGFPINEQDPSKSKVVVFEDA-PAGIAAGKAAGCKIVGIATTF  224 (275)
T ss_dssp             HHHHHHHHHTTCCCCSSCGGGSCEEEEESS-HHHHHHHHHTTCEEEEESSSS
T ss_pred             HHHHHHHHHcCCCccccCCCcceEEEEeCC-HHHHHHHHHcCCEEEEECCCC
Confidence            999999999999       99999999999 799999999999999987763

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.91  E-value=2.7e-24  Score=168.47  Aligned_cols=99  Identities=16%  Similarity=0.141  Sum_probs=89.9

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEe----------cCCCCCCCCCHHHHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVI----------SSEVGCEKPDPRIFKAALDQ  211 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~----------~~~~~~~Kp~~~~~~~~~~~  211 (261)
                      .+++||+.++|+.|++.|++++++||+... +..+++.+|+..+|+.++.          +.....+||++..|+.+++.
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~  153 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRL  153 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHH
Confidence            479999999999999999999999998877 6889999999999998873          33456789999999999999


Q ss_pred             cCCCCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          212 MSVEASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       212 l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      +|++|+++++|||+ .+|+++|+.+|+++++
T Consensus       154 ~g~~~~~~i~vGDs-~~Di~~a~~aG~~~~~  183 (217)
T 3m1y_A          154 LNISKTNTLVVGDG-ANDLSMFKHAHIKIAF  183 (217)
T ss_dssp             HTCCSTTEEEEECS-GGGHHHHTTCSEEEEE
T ss_pred             cCCCHhHEEEEeCC-HHHHHHHHHCCCeEEE
Confidence            99999999999999 7999999999998865

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.91  E-value=1.1e-23  Score=168.99  Aligned_cols=98  Identities=15%  Similarity=0.154  Sum_probs=84.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhc-----------CcccccceEEecCCCCCCCCCHHHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDL-----------NVIDLFDAVVISSEVGCEKPDPRIFKAALD  210 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~-----------gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  210 (261)
                      .+++||+.++|+.    |++++|+||++.. ++..++..           ++.++|+.++.+ .+...||+|+.|..+++
T Consensus       124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-~~~g~KP~p~~~~~a~~  198 (253)
T 2g80_A          124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-NTSGKKTETQSYANILR  198 (253)
T ss_dssp             BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-HHHCCTTCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee-eccCCCCCHHHHHHHHH
Confidence            5789999999988    8999999999887 67777765           477778777765 33125999999999999


Q ss_pred             HcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          211 QMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       211 ~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++|++|++|++|||+ ..|+++|+++|+.++++.++
T Consensus       199 ~lg~~p~~~l~vgDs-~~di~aA~~aG~~~i~v~~~  233 (253)
T 2g80_A          199 DIGAKASEVLFLSDN-PLELDAAAGVGIATGLASRP  233 (253)
T ss_dssp             HHTCCGGGEEEEESC-HHHHHHHHTTTCEEEEECCT
T ss_pred             HcCCCcccEEEEcCC-HHHHHHHHHcCCEEEEEcCC
Confidence            999999999999999 79999999999999998663

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.90  E-value=2e-24  Score=157.18  Aligned_cols=114  Identities=20%  Similarity=0.241  Sum_probs=102.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      .++||+.++|+.|++.|++++++||++.. +..+++.+|+..+|+.++++++.+..||++..|+.+++++|++|+++++|
T Consensus        18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v   97 (137)
T 2pr7_A           18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLV   97 (137)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence            34578889999999999999999998876 68888999999999999999988999999999999999999999999999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhhh
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~  258 (261)
                      ||+ .+|+++|+++|+.++++.++....+++.+.+.
T Consensus        98 gD~-~~di~~a~~~G~~~i~~~~~~~~~~~l~~~~~  132 (137)
T 2pr7_A           98 DDS-ILNVRGAVEAGLVGVYYQQFDRAVVEIVGLFG  132 (137)
T ss_dssp             ESC-HHHHHHHHHHTCEEEECSCHHHHHHHHHHHHT
T ss_pred             cCC-HHHHHHHHHCCCEEEEeCChHHHHHHHHHHhC
Confidence            999 79999999999999999887776677777664

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.90  E-value=5.4e-24  Score=188.19  Aligned_cols=201  Identities=21%  Similarity=0.276  Sum_probs=130.1

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcC-CCccccccCCCChhHHHHHHHHh-----
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAA-PWPEKLRYEGDGRPFWRLVVSEA-----  121 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----  121 (261)
                      |++|+|+||+||||++..  ....+......++......  ...+...... .+............+........     
T Consensus         1 M~~k~viFD~DGTL~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (555)
T 3i28_A            1 MTLRAAVFDLDGVLALPA--VFGVLGRTEEALALPRGLL--NDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSE   76 (555)
T ss_dssp             ---CEEEECTBTTTEESC--THHHHHHHHHHTTCCTTHH--HHHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEecCCeeecch--hHHHHHHHHHHhCCcHHHH--HHHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHHhhh
Confidence            468999999999998754  4456777777777654322  2222111110 00111111111122222111110     


Q ss_pred             -cCC--CchHHHHHHHHH-HhhCCceeeCccHHHHHHHHHHCCCeEEEEeCC--chH-HHHHHHhc--CcccccceEEec
Q 024886          122 -TGC--TNDDYFEEVYEY-YAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNF--DTR-LRKLLKDL--NVIDLFDAVVIS  192 (261)
Q Consensus       122 -~~~--~~~~~~~~~~~~-~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~--~~~-~~~~l~~~--gl~~~f~~i~~~  192 (261)
                       ...  ............ +..   ..++||+.++|+.|+++|++++|+||+  ... ....+...  |+..+||.++++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~  153 (555)
T 3i28_A           77 TAKVCLPKNFSIKEIFDKAISA---RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIES  153 (555)
T ss_dssp             HTTCCCCTTCCHHHHHHHHHHH---CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEH
T ss_pred             ccCCCCCccccHHHHHHHhHhh---cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEec
Confidence             000  000012222222 222   489999999999999999999999997  211 23333333  788899999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          193 SEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       193 ~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      ++++..||+|++|..+++++|++|++|++|||+ .+|+++|+++|+.++++.++.....++.+.
T Consensus       154 ~~~~~~KP~p~~~~~~~~~lg~~p~~~~~v~D~-~~di~~a~~aG~~~~~~~~~~~~~~~l~~~  216 (555)
T 3i28_A          154 CQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDI-GANLKPARDLGMVTILVQDTDTALKELEKV  216 (555)
T ss_dssp             HHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESC-HHHHHHHHHHTCEEEECSSHHHHHHHHHHH
T ss_pred             cccCCCCCCHHHHHHHHHHcCCChhHEEEECCc-HHHHHHHHHcCCEEEEECCCccHHHHHHhh
Confidence            999999999999999999999999999999999 899999999999999998765555555543

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.90  E-value=1.5e-23  Score=159.77  Aligned_cols=102  Identities=24%  Similarity=0.426  Sum_probs=89.2

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch---------------H-HHHHHHhcCcccccceEEe-----cCCCCCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT---------------R-LRKLLKDLNVIDLFDAVVI-----SSEVGCEKPD  201 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~---------------~-~~~~l~~~gl~~~f~~i~~-----~~~~~~~Kp~  201 (261)
                      ..++||+.++|+.|+++|++++|+||++.               . +...++.+|  .+|+.++.     +++.+..||+
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~KP~  103 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCACRKPL  103 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSSSTTS
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCCCCCC
Confidence            48899999999999999999999999874               3 567778888  34555552     4677889999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +.+|+.+++++|++|+++++|||+ .+|+++|+++|+.++++..+.
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~a~~aG~~~i~v~~g~  148 (179)
T 3l8h_A          104 PGMYRDIARRYDVDLAGVPAVGDS-LRDLQAAAQAGCAPWLVQTGN  148 (179)
T ss_dssp             SHHHHHHHHHHTCCCTTCEEEESS-HHHHHHHHHHTCEEEEESTTT
T ss_pred             HHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHCCCcEEEECCCC
Confidence            999999999999999999999999 799999999999999998774

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.90  E-value=1.4e-22  Score=160.42  Aligned_cols=189  Identities=13%  Similarity=0.020  Sum_probs=125.5

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      ||++++|+||+||||+|++...  .+...+...+.................    ...........+.........+...
T Consensus         1 M~~~k~viFDlDGTL~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~   74 (232)
T 3fvv_A            1 MTTRRLALFDLDHTLLPLDSDY--QWADFLARTGRAGDPAEARRRNDDLME----RYNRGELTAEQAAEFMLGLLAAHSP   74 (232)
T ss_dssp             -CCCEEEEECCBTTTBSSCHHH--HHHHHHHHTTSSSSHHHHHHHHHHHHH----HHHHTCSCHHHHHHHHHHHHHTSCH
T ss_pred             CCCCcEEEEeCCCCCcCCchHH--HHHHHHHHcCCCCccHHHHHHHHHHHH----HHHCCCCCHHHHHHHHHHHhcCCCH
Confidence            3567899999999999986542  556666665553122222211111111    0001111122333333333444555


Q ss_pred             hHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecC----------CC
Q 024886          127 DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISS----------EV  195 (261)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~----------~~  195 (261)
                      .++.....+.+.......++||+.++|+.|+++|++++|+||+... ++.+++.+|+..+|...+...          ..
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~  154 (232)
T 3fvv_A           75 VELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTP  154 (232)
T ss_dssp             HHHHHHHHHHHHHTTGGGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSC
T ss_pred             HHHHHHHHHHHHHhhhhhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCC
Confidence            5554444455544332367999999999999999999999999887 799999999976665433211          22


Q ss_pred             CCCCCCHHHHHHHHHHcC---CCCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          196 GCEKPDPRIFKAALDQMS---VEASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~---~~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      ..+++++..+..+++.+|   ++|++|++|||+ .+|+.+++.+|+.++.
T Consensus       155 ~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs-~~D~~~~~~ag~~~~~  203 (232)
T 3fvv_A          155 SFREGKVVRVNQWLAGMGLALGDFAESYFYSDS-VNDVPLLEAVTRPIAA  203 (232)
T ss_dssp             SSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECC-GGGHHHHHHSSEEEEE
T ss_pred             CcchHHHHHHHHHHHHcCCCcCchhheEEEeCC-HhhHHHHHhCCCeEEE
Confidence            345777888999999999   999999999999 7999999999988754

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.89  E-value=2.2e-23  Score=161.17  Aligned_cols=100  Identities=19%  Similarity=0.133  Sum_probs=87.8

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCC-CcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEA-SRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~-~~~l~  221 (261)
                      ..++||+.++|+.|+++|++++|+||......  ++..+  .+|+.++++++.+..||+|++|..+++++|+.+ ++|+|
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~--~~~~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~  110 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALS--TPLAA--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVL  110 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH--HHHHT--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEE
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH--HHhcC--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEE
Confidence            47899999999999999999999999877632  22223  468999999999999999999999999999975 89999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      |||+ .+|+++|+++|+.+|++..+.
T Consensus       111 VGDs-~~Di~aA~~aG~~~i~v~~g~  135 (196)
T 2oda_A          111 ISGD-PRLLQSGLNAGLWTIGLASCG  135 (196)
T ss_dssp             EESC-HHHHHHHHHHTCEEEEESSSS
T ss_pred             EeCC-HHHHHHHHHCCCEEEEEccCC
Confidence            9999 799999999999999997764

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.89  E-value=1.8e-23  Score=165.80  Aligned_cols=178  Identities=14%  Similarity=0.087  Sum_probs=121.7

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHH--HHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCC
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADI--KKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCT  125 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (261)
                      .++|+|+||+||||+|+...+..++.++++++|.+.+....  ...+....+..         ..............   
T Consensus         9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~---------~~~~~~~~~~~~~~---   76 (231)
T 2p11_A            9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYA---------DYLGALQRYRLEQP---   76 (231)
T ss_dssp             CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CC---------CHHHHHHHHHHHCT---
T ss_pred             CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCch---------HHHHHHHHHHhccc---
Confidence            35789999999999999988888999999998865322110  11111111110         00111122111111   


Q ss_pred             chHHHHHHHHHHhhC-CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          126 NDDYFEEVYEYYAKG-EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       126 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      .....+.+.+.+... ....++||+.++|+.|+++| +++|+||++.. +...++.+|+..+|+.++..   +  ++++.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~---~--~~K~~  150 (231)
T 2p11_A           77 RDTRLLLMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVLI---Y--IHKEL  150 (231)
T ss_dssp             TCTGGGGGHHHHHHCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE---E--SSGGG
T ss_pred             cchHHHHHHHHHHHHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe---c--CChHH
Confidence            111111122222221 23588999999999999999 99999998876 78999999999999876542   2  33456


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchh---hhHHHHhCCCeEEEECCC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKA---DKQGANSLGIDCWLWGID  246 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~---Di~~a~~~G~~~i~v~~~  246 (261)
                      .++.+++  |++|++|++|||+ .+   |+++|+++|+.++++..+
T Consensus       151 ~~~~~~~--~~~~~~~~~vgDs-~~d~~di~~A~~aG~~~i~v~~g  193 (231)
T 2p11_A          151 MLDQVME--CYPARHYVMVDDK-LRILAAMKKAWGARLTTVFPRQG  193 (231)
T ss_dssp             CHHHHHH--HSCCSEEEEECSC-HHHHHHHHHHHGGGEEEEEECCS
T ss_pred             HHHHHHh--cCCCceEEEEcCc-cchhhhhHHHHHcCCeEEEeCCC
Confidence            7877777  7899999999999 67   999999999999999876

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.89  E-value=8.2e-23  Score=161.16  Aligned_cols=174  Identities=15%  Similarity=0.170  Sum_probs=115.9

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      ++++|+|+||+||||+|+.     .+..+++.+|......+....+   .+.        .............. .... 
T Consensus        11 ~~~~k~viFD~DGTLvd~~-----~~~~~~~~~g~~~~~~~~~~~~---~~~--------~~~~~~~~~~~~~~-~~~~-   72 (225)
T 1nnl_A           11 FYSADAVCFDVDSTVIREE-----GIDELAKICGVEDAVSEMTRRA---MGG--------AVPFKAALTERLAL-IQPS-   72 (225)
T ss_dssp             HHHCSEEEEETBTTTBSSC-----HHHHHHHHTTCTTTC-----------------------CHHHHHHHHHHH-HCCC-
T ss_pred             HhhCCEEEEeCcccccccc-----cHHHHHHHhCCcHHHHHHHHHH---HcC--------CccHHHHHHHHHHH-hcCC-
Confidence            4568999999999999985     3566777888764322221110   000        00001111111111 1111 


Q ss_pred             hHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc--cccceEE--------ecCCC
Q 024886          127 DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI--DLFDAVV--------ISSEV  195 (261)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~--~~f~~i~--------~~~~~  195 (261)
                         .+.+.+.+... ..+++||+.++|+.|+++|++++|+||++.. +..+++.+|+.  .+|+.++        .+.+.
T Consensus        73 ---~~~~~~~~~~~-~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~  148 (225)
T 1nnl_A           73 ---REQVQRLIAEQ-PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE  148 (225)
T ss_dssp             ---HHHHHHHHHHS-CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT
T ss_pred             ---HHHHHHHHHhc-cCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCC
Confidence               12222333321 2478999999999999999999999998877 78999999987  4777653        33332


Q ss_pred             CC----CCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          196 GC----EKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       196 ~~----~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ..    .+|+|+.|..+++++|+  +++++|||+ .+|+++|+++|+ +++++.+
T Consensus       149 ~~~~~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs-~~Di~~a~~ag~-~i~~~~~  199 (225)
T 1nnl_A          149 TQPTAESGGKGKVIKLLKEKFHF--KKIIMIGDG-ATDMEACPPADA-FIGFGGN  199 (225)
T ss_dssp             TSGGGSTTHHHHHHHHHHHHHCC--SCEEEEESS-HHHHTTTTTSSE-EEEECSS
T ss_pred             CCcccCCCchHHHHHHHHHHcCC--CcEEEEeCc-HHhHHHHHhCCe-EEEecCc
Confidence            21    36788899999999998  789999999 799999999999 8888654

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.89  E-value=8.5e-23  Score=169.01  Aligned_cols=172  Identities=15%  Similarity=0.161  Sum_probs=121.1

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      +..+++|+||+||||+++..     +..++..+|..........   ....        .................+. .
T Consensus       105 ~~~~kaviFDlDGTLid~~~-----~~~la~~~g~~~~~~~~~~---~~~~--------g~~~~~~~l~~~~~~l~~~-~  167 (317)
T 4eze_A          105 LPANGIIAFDMDSTFIAEEG-----VDEIARELGMSTQITAITQ---QAME--------GKLDFNASFTRRIGMLKGT-P  167 (317)
T ss_dssp             CCCSCEEEECTBTTTBSSCH-----HHHHHHHTTCHHHHHHHHH---HHHT--------TSSCHHHHHHHHHHTTTTC-B
T ss_pred             CCCCCEEEEcCCCCccCCcc-----HHHHHHHhCCcHHHHHHHH---HHhc--------CCCCHHHHHHHHHHHhcCC-C
Confidence            44679999999999999753     4555666665422222111   1111        0111112222222221111 2


Q ss_pred             hHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEec----------CCC
Q 024886          127 DDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVIS----------SEV  195 (261)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~----------~~~  195 (261)
                      .+....+.   ..   ..++||+.++|+.|+++|++++|+||+... ++.+++.+|+..+|+.++..          ...
T Consensus       168 ~~~i~~~~---~~---~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~  241 (317)
T 4eze_A          168 KAVLNAVC---DR---MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPI  241 (317)
T ss_dssp             HHHHHHHH---HT---CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSC
T ss_pred             HHHHHHHH---hC---CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEeccc
Confidence            22222222   22   479999999999999999999999998887 79999999999999877653          334


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      ..+||++..|..+++++|++|+++++|||+ .+|+.+|+.+|+.+++
T Consensus       242 ~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs-~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          242 MNAANKKQTLVDLAARLNIATENIIACGDG-ANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEEEEE
T ss_pred             CCCCCCHHHHHHHHHHcCCCcceEEEEeCC-HHHHHHHHHCCCeEEe
Confidence            466999999999999999999999999999 7999999999998765

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.89  E-value=1.5e-23  Score=159.45  Aligned_cols=113  Identities=22%  Similarity=0.426  Sum_probs=98.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCC---------------chH-HHHHHHhcCcccccceEEec-----CCCCCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNF---------------DTR-LRKLLKDLNVIDLFDAVVIS-----SEVGCEKPD  201 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~---------------~~~-~~~~l~~~gl~~~f~~i~~~-----~~~~~~Kp~  201 (261)
                      ..++||+.++|+.|++.|++++|+||+               ... +..+++.+|+.  |+.++.+     ++.+..||+
T Consensus        41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~  118 (176)
T 2fpr_A           41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPK  118 (176)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTS
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCC
Confidence            478999999999999999999999998               444 68889999986  8888754     778889999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhhh
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~  258 (261)
                      +.+|+.+++++|++|++++||||+ .+|+++|+++|+.++++.++...++++++.+.
T Consensus       119 p~~~~~~~~~~gi~~~~~l~VGD~-~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~l~  174 (176)
T 2fpr_A          119 VKLVERYLAEQAMDRANSYVIGDR-ATDIQLAENMGINGLRYDRETLNWPMIGEQLT  174 (176)
T ss_dssp             CGGGGGGC----CCGGGCEEEESS-HHHHHHHHHHTSEEEECBTTTBCHHHHHHHTC
T ss_pred             HHHHHHHHHHcCCCHHHEEEEcCC-HHHHHHHHHcCCeEEEEcCCcccHHHHHHHHh
Confidence            999999999999999999999999 79999999999999999999888999988764

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.88  E-value=3.3e-22  Score=156.47  Aligned_cols=102  Identities=23%  Similarity=0.352  Sum_probs=90.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch---------------H-HHHHHHhcCcccccceEEec------------CC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT---------------R-LRKLLKDLNVIDLFDAVVIS------------SE  194 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~---------------~-~~~~l~~~gl~~~f~~i~~~------------~~  194 (261)
                      ..++||+.++|+.|+++|++++|+||+..               . +...++.+|+.  |+.++.+            +.
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~  126 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQV  126 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSC
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCcc
Confidence            47899999999999999999999999883               4 68889999986  7776643            34


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeE-EEECCCC
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC-WLWGIDV  247 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~-i~v~~~~  247 (261)
                      .+.+||++.+|..+++.+|++|+++++|||+ .+|+++|+++|+.+ +++.++.
T Consensus       127 ~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~-~~Di~~a~~aG~~~~i~v~~g~  179 (211)
T 2gmw_A          127 CDCRKPHPGMLLSARDYLHIDMAASYMVGDK-LEDMQAAVAANVGTKVLVRTGK  179 (211)
T ss_dssp             CSSSTTSCHHHHHHHHHHTBCGGGCEEEESS-HHHHHHHHHTTCSEEEEESSSS
T ss_pred             CcCCCCCHHHHHHHHHHcCCCHHHEEEEcCC-HHHHHHHHHCCCceEEEEecCC
Confidence            6679999999999999999999999999999 69999999999999 9987763

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.87  E-value=1.2e-21  Score=152.29  Aligned_cols=98  Identities=13%  Similarity=0.124  Sum_probs=85.4

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc-ceEEecCCCCC---CCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF-DAVVISSEVGC---EKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f-~~i~~~~~~~~---~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ..++||+.++|+.|++. ++++|+||+... +..+++.+|+..+| +.++++++...   .+|+|..+..+++++++.|+
T Consensus        68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~  146 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY  146 (206)
T ss_dssp             CCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred             cCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCC
Confidence            57899999999999999 999999998877 68999999999999 56666555431   24788899999999999999


Q ss_pred             cEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          218 RTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       218 ~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      ++++|||+ .+|+.+|+.+|+.++.
T Consensus       147 ~~~~iGD~-~~Di~~a~~aG~~~~~  170 (206)
T 1rku_A          147 RVIAAGDS-YNDTTMLSEAHAGILF  170 (206)
T ss_dssp             EEEEEECS-STTHHHHHHSSEEEEE
T ss_pred             EEEEEeCC-hhhHHHHHhcCccEEE
Confidence            99999999 7999999999998753

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.86  E-value=1e-22  Score=162.31  Aligned_cols=189  Identities=19%  Similarity=0.237  Sum_probs=124.0

Q ss_pred             ccccEEEEccCCccccccccHHHH--HHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCC-CChhHHHHHHHHhcCC
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEET--YASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEG-DGRPFWRLVVSEATGC  124 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  124 (261)
                      |++|+|+||+||||+|+...+..+  +.+.+++.|+.+....                 ...+ ........+.......
T Consensus         1 M~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t-----------------~~~g~~~~~~~~~~~~~g~~~   63 (250)
T 2c4n_A            1 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLT-----------------NYPSQTGQDLANRFATAGVDV   63 (250)
T ss_dssp             CCCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEE-----------------SCCSCCHHHHHHHHHHTTCCC
T ss_pred             CCccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEE-----------------CCCCCCHHHHHHHHHHcCCCC
Confidence            357999999999999988766555  5556667776531100                 0000 0011111111100000


Q ss_pred             CchHH---HHHHHHHHhh-CCceeeCccHHHHHHHHHHCCCeEE---------------------------------EEe
Q 024886          125 TNDDY---FEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVA---------------------------------VVS  167 (261)
Q Consensus       125 ~~~~~---~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~---------------------------------i~T  167 (261)
                      .....   ......+... .....+++|+.++++.+++.|++++                                 ++|
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t  143 (250)
T 2c4n_A           64 PDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIAT  143 (250)
T ss_dssp             CGGGEEEHHHHHHHHHHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEES
T ss_pred             CHHHeEcHHHHHHHHHHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            00000   0001111111 1235778999999999999999998                                 888


Q ss_pred             CCchHHHHHHHhcC-cccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          168 NFDTRLRKLLKDLN-VIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       168 ~~~~~~~~~l~~~g-l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |.+......++.+| +..+|+.+++.+....+||++.+|+.+++++|++++++++|||++.+|++||+.+|+++++|..+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g  223 (250)
T 2c4n_A          144 NPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG  223 (250)
T ss_dssp             CCCSBSSTTCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSS
T ss_pred             CCCCCCCCeeecchHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCC
Confidence            87621344444455 55667777777777889999999999999999999999999998349999999999999999888


Q ss_pred             CCChHHH
Q 024886          247 VKTFSDV  253 (261)
Q Consensus       247 ~~~~~el  253 (261)
                      ....+++
T Consensus       224 ~~~~~~~  230 (250)
T 2c4n_A          224 VSSLDDI  230 (250)
T ss_dssp             SCCGGGG
T ss_pred             CCChhhh
Confidence            6654444

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.86  E-value=1.8e-21  Score=167.34  Aligned_cols=171  Identities=19%  Similarity=0.165  Sum_probs=119.3

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      .++++|+||+||||++..     .+..++..+|...   ............        ................+. ..
T Consensus       183 ~~~k~viFD~DgTLi~~~-----~~~~la~~~g~~~---~~~~~~~~~~~g--------~~~~~~~~~~~~~~l~~~-~~  245 (415)
T 3p96_A          183 RAKRLIVFDVDSTLVQGE-----VIEMLAAKAGAEG---QVAAITDAAMRG--------ELDFAQSLQQRVATLAGL-PA  245 (415)
T ss_dssp             TCCCEEEECTBTTTBSSC-----HHHHHHHHTTCHH---HHHHHHHHHHTT--------CSCHHHHHHHHHHTTTTC-BT
T ss_pred             cCCcEEEEcCcccCcCCc-----hHHHHHHHcCCcH---HHHHHHHHHhcC--------CcCHHHHHHHHHHHhcCC-CH
Confidence            367999999999999975     3455666666532   111111111111        111122222222222222 22


Q ss_pred             HHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEE-------e---cCCCC
Q 024886          128 DYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVV-------I---SSEVG  196 (261)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~-------~---~~~~~  196 (261)
                      ...+.+.+.      ++++||+.++++.|++.|++++|+||+... +..+++.+|+..+|+..+       +   ...+.
T Consensus       246 ~~~~~~~~~------~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~  319 (415)
T 3p96_A          246 TVIDEVAGQ------LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPII  319 (415)
T ss_dssp             HHHHHHHHH------CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCC
T ss_pred             HHHHHHHHh------CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCC
Confidence            222333222      489999999999999999999999998877 789999999987776433       1   22445


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      .+||++..|..+++++|++|+++++|||+ .+|+.+|+.+|+++++
T Consensus       320 ~~kpk~~~~~~~~~~~gi~~~~~i~vGD~-~~Di~~a~~aG~~va~  364 (415)
T 3p96_A          320 DRAGKATALREFAQRAGVPMAQTVAVGDG-ANDIDMLAAAGLGIAF  364 (415)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEEEEE
T ss_pred             CCcchHHHHHHHHHHcCcChhhEEEEECC-HHHHHHHHHCCCeEEE
Confidence            58999999999999999999999999999 7999999999998865

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.85  E-value=4.5e-21  Score=152.51  Aligned_cols=96  Identities=13%  Similarity=0.114  Sum_probs=83.0

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCC--------CCCCHH-HHH------
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGC--------EKPDPR-IFK------  206 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~--------~Kp~~~-~~~------  206 (261)
                      .+++||+.++|+.|+++|++++|+||++.. +..+++  |+..+ +.+++++....        .||+|. ++.      
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K  152 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  152 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCcH
Confidence            588999999999999999999999998877 677777  77665 88888876543        789888 454      


Q ss_pred             -HHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          207 -AALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       207 -~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                       .++++++++|+++++|||+ .+|+.+|+++|+.++.
T Consensus       153 ~~~~~~~~~~~~~~~~vGDs-~~Di~~a~~aG~~~~~  188 (236)
T 2fea_A          153 PSVIHELSEPNQYIIMIGDS-VTDVEAAKLSDLCFAR  188 (236)
T ss_dssp             HHHHHHHCCTTCEEEEEECC-GGGHHHHHTCSEEEEC
T ss_pred             HHHHHHHhccCCeEEEEeCC-hHHHHHHHhCCeeeec
Confidence             8889999999999999999 8999999999999863

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.85  E-value=9.4e-21  Score=159.65  Aligned_cols=104  Identities=20%  Similarity=0.203  Sum_probs=95.1

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccc--eEEecCCCC-----------CCCCCHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFD--AVVISSEVG-----------CEKPDPRIFKAA  208 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~--~i~~~~~~~-----------~~Kp~~~~~~~~  208 (261)
                      ..++||+.++|+.|+++|++++|+||++.. +...++.+|+..+|+  .+++++++.           .+||+|+.|..+
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a  293 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHH
Confidence            467899999999999999999999999876 788999999999999  888887654           489999999999


Q ss_pred             HHHcC--------------CCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          209 LDQMS--------------VEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       209 ~~~l~--------------~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      ++.+|              ++|++|++|||+ .+|+++|+++|+.++++.++.
T Consensus       294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs-~~Di~aAk~AG~~~I~V~~g~  345 (384)
T 1qyi_A          294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDS-LADLLSAQKIGATFIGTLTGL  345 (384)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESS-HHHHHHHHHHTCEEEEESCBT
T ss_pred             HHHcCCccccccccccccCCCCcCeEEEcCC-HHHHHHHHHcCCEEEEECCCc
Confidence            99999              999999999999 799999999999999997754

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.85  E-value=1.6e-20  Score=144.07  Aligned_cols=108  Identities=15%  Similarity=0.201  Sum_probs=93.9

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCc-hH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFD-TR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV  220 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~-~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  220 (261)
                      ..++||+.++|+.|++.|++++|+||++ .. +..+++.+|+..+|+.++..     .+|++..|..+++++|++|++++
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~  141 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY-----PGSKITHFERLQQKTGIPFSQMI  141 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEES-----SSCHHHHHHHHHHHHCCCGGGEE
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEE-----eCchHHHHHHHHHHcCCChHHEE
Confidence            5789999999999999999999999987 45 78999999999999987543     25788899999999999999999


Q ss_pred             EEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          221 HIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       221 ~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +|||+ .+|+++|+++|+.++++.++.. ..++.+.+
T Consensus       142 ~igD~-~~Di~~a~~aG~~~i~v~~g~~-~~~~~~~l  176 (187)
T 2wm8_A          142 FFDDE-RRNIVDVSKLGVTCIHIQNGMN-LQTLSQGL  176 (187)
T ss_dssp             EEESC-HHHHHHHHTTTCEEEECSSSCC-HHHHHHHH
T ss_pred             EEeCC-ccChHHHHHcCCEEEEECCCCC-hHHHHHHH
Confidence            99999 8999999999999999987754 34444433

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.84  E-value=1e-21  Score=158.74  Aligned_cols=107  Identities=21%  Similarity=0.261  Sum_probs=89.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchHH---HH-HHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTRL---RK-LLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~---~~-~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .++|++.++++.|+ .|+++ |+||.+...   .. .++..++..+|+.+++++..+.+||+|.+|+.+++++|++|+++
T Consensus       126 ~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~  203 (264)
T 1yv9_A          126 LSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQV  203 (264)
T ss_dssp             CCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGE
T ss_pred             cCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHE
Confidence            57899999999997 88987 889976531   22 23344577788999888888899999999999999999999999


Q ss_pred             EEEcCCchhhhHHHHhCCCeEEEECCCCCChHH
Q 024886          220 VHIGDDEKADKQGANSLGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~e  252 (261)
                      ++|||++.+|+.+|+++|+.+++|.++....++
T Consensus       204 ~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~  236 (264)
T 1yv9_A          204 IMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSA  236 (264)
T ss_dssp             EEEESCTTTHHHHHHHHTCEEEEETTSSSCSSS
T ss_pred             EEECCCcHHHHHHHHHcCCcEEEECCCCCCHHH
Confidence            999999459999999999999999887654433

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.83  E-value=3.6e-21  Score=154.79  Aligned_cols=101  Identities=22%  Similarity=0.184  Sum_probs=87.1

Q ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccc---eEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 024886          145 LPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFD---AVVISSEVGCEKPDPRIFKAALDQMSVEASRTV  220 (261)
Q Consensus       145 ~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~---~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  220 (261)
                      ++|++.++++.|+ .|+++ ++||.+.. ....+...|+..+|+   .+++++..+.+||+|.+|+.+++++|++|++|+
T Consensus       123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~  200 (259)
T 2ho4_A          123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAV  200 (259)
T ss_dssp             BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEE
T ss_pred             CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEE
Confidence            6789999999999 88999 99997755 444566778887876   667777788899999999999999999999999


Q ss_pred             EEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          221 HIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       221 ~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +|||+..+|+++|+++|+.++++.++.
T Consensus       201 ~iGD~~~~Di~~a~~aG~~~i~v~~g~  227 (259)
T 2ho4_A          201 MIGDDCRDDVDGAQNIGMLGILVKTGK  227 (259)
T ss_dssp             EEESCTTTTHHHHHHTTCEEEEESSTT
T ss_pred             EECCCcHHHHHHHHHCCCcEEEECCCC
Confidence            999993399999999999999997763

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.83  E-value=3.2e-20  Score=145.81  Aligned_cols=101  Identities=26%  Similarity=0.408  Sum_probs=89.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch---------------H-HHHHHHhcCcccccceEE-ec-----------CC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT---------------R-LRKLLKDLNVIDLFDAVV-IS-----------SE  194 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~---------------~-~~~~l~~~gl~~~f~~i~-~~-----------~~  194 (261)
                      ..++||+.++|+.|+++|++++|+||+..               . +...++.+|+.  |+.++ +.           +.
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~~  132 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIPD  132 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCSS
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeecccC
Confidence            37899999999999999999999999886               4 68889999975  66544 33           55


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeE-EEECCC
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC-WLWGID  246 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~-i~v~~~  246 (261)
                      ...+||++.+|+.+++++|++|+++++|||+ .+|+++|+++|+.+ +++..+
T Consensus       133 ~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~-~~Di~~a~~aG~~~~i~v~~g  184 (218)
T 2o2x_A          133 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDK-LADMQAGKRAGLAQGWLVDGE  184 (218)
T ss_dssp             CTTSTTSCHHHHHHHHHHTCCGGGCEEEESS-HHHHHHHHHTTCSEEEEETCC
T ss_pred             CccCCCCHHHHHHHHHHcCCCHHHEEEEeCC-HHHHHHHHHCCCCEeEEEecC
Confidence            6789999999999999999999999999999 69999999999999 998776

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.83  E-value=1.1e-20  Score=147.47  Aligned_cols=101  Identities=17%  Similarity=0.155  Sum_probs=77.8

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc--cccce-EEe-cCC----CCCCCCCHH-HHHHHHHHcC
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI--DLFDA-VVI-SSE----VGCEKPDPR-IFKAALDQMS  213 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~--~~f~~-i~~-~~~----~~~~Kp~~~-~~~~~~~~l~  213 (261)
                      .++||+.++++.|++.|++++++||+... +...++.+|+.  .+|.. ++. .+.    ....||++. .+..+.+.+|
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  161 (219)
T 3kd3_A           82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG  161 (219)
T ss_dssp             TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred             cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence            58899999999999999999999998877 78899999984  45543 222 222    234666654 4555666679


Q ss_pred             CCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          214 VEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       214 ~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++++++++|||+ .+|++++ ++|+.+++++.+
T Consensus       162 ~~~~~~~~vGD~-~~Di~~~-~~G~~~~~v~~~  192 (219)
T 3kd3_A          162 LIDGEVIAIGDG-YTDYQLY-EKGYATKFIAYM  192 (219)
T ss_dssp             GCCSEEEEEESS-HHHHHHH-HHTSCSEEEEEC
T ss_pred             CCCCCEEEEECC-HhHHHHH-hCCCCcEEEecc
Confidence            999999999999 7999998 689986665444

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.82  E-value=8.8e-20  Score=141.78  Aligned_cols=100  Identities=24%  Similarity=0.228  Sum_probs=81.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC----------CCCCCCCHHHHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE----------VGCEKPDPRIFKAALDQ  211 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~----------~~~~Kp~~~~~~~~~~~  211 (261)
                      ..++|++.++++.|+++|++++++|+.... +...++.+|+..+|+..+...+          ...+++++..+..++++
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~  154 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI  154 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHH
Confidence            367899999999999999999999998766 6778888888766654432211          12346678899999999


Q ss_pred             cCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC
Q 024886          212 MSVEASRTVHIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       212 l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      +|++++++++|||+ .+|+++++.+|+.+ +++
T Consensus       155 lgi~~~~~~~iGD~-~~Di~~~~~ag~~~-~~~  185 (211)
T 1l7m_A          155 EGINLEDTVAVGDG-ANDISMFKKAGLKI-AFC  185 (211)
T ss_dssp             HTCCGGGEEEEECS-GGGHHHHHHCSEEE-EES
T ss_pred             cCCCHHHEEEEecC-hhHHHHHHHCCCEE-EEC
Confidence            99999999999999 79999999999975 454

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.82  E-value=9.6e-21  Score=141.90  Aligned_cols=92  Identities=23%  Similarity=0.276  Sum_probs=79.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      .+.|+..++|+.|+++|++++++||++.. +..+++.+|+..+|+.         +||++..|..+++.+|++|+++++|
T Consensus        36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~---------~kp~~~~~~~~~~~~~~~~~~~~~v  106 (162)
T 2p9j_A           36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG---------SYKKLEIYEKIKEKYSLKDEEIGFI  106 (162)
T ss_dssp             EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC---------C--CHHHHHHHHHHTTCCGGGEEEE
T ss_pred             eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC---------CCCCHHHHHHHHHHcCCCHHHEEEE
Confidence            44567789999999999999999998876 7899999998766643         6999999999999999999999999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCC
Q 024886          223 GDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ||+ .+|+.+|+.+|+.++ +.++
T Consensus       107 GD~-~~Di~~a~~ag~~~~-~~~~  128 (162)
T 2p9j_A          107 GDD-VVDIEVMKKVGFPVA-VRNA  128 (162)
T ss_dssp             ECS-GGGHHHHHHSSEEEE-CTTS
T ss_pred             CCC-HHHHHHHHHCCCeEE-ecCc
Confidence            999 799999999999875 4444

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.82  E-value=5.9e-22  Score=152.83  Aligned_cols=152  Identities=14%  Similarity=0.125  Sum_probs=111.4

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCC-CCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchH
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLN-VDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDD  128 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (261)
                      .++|+||+||||+|+...+..++.+.++  |.+ ++.+.+..               ..  ....    +....    .+
T Consensus         2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~---------------~~--~~~~----~~~~~----~~   54 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRG---------------FL--AREQ----YRALR----PD   54 (193)
T ss_dssp             CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCS---------------SC--HHHH----HHHHC----TT
T ss_pred             CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHH---------------hh--HHHH----HHHHh----HH
Confidence            3789999999999998888888887765  654 33322110               00  0111    11111    12


Q ss_pred             HHHHHHHHHhhC---CceeeCccHHHHHHHHHHC-CCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          129 YFEEVYEYYAKG---EAWHLPHGAYQSILLLKDA-GVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       129 ~~~~~~~~~~~~---~~~~~~~g~~~~l~~L~~~-g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      ..+.+.+.|...   ....++||+.++|+.|++. |++++|+||++.. +..+++.+|+   |+.+++++          
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~~----------  121 (193)
T 2i7d_A           55 LADKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGPQ----------  121 (193)
T ss_dssp             HHHHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCHH----------
T ss_pred             HHHHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCHH----------
Confidence            334444555432   2468899999999999999 9999999998876 7888888888   77776542          


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhh----hHHHH-hCCCeEEEECCC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKAD----KQGAN-SLGIDCWLWGID  246 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~D----i~~a~-~~G~~~i~v~~~  246 (261)
                          +++++|++|++|++|||+ ..|    +.+|+ ++|+.++++.++
T Consensus       122 ----~~~~~~~~~~~~~~vgDs-~~dD~~~i~~A~~~aG~~~i~~~~~  164 (193)
T 2i7d_A          122 ----FVERIILTRDKTVVLGDL-LIDDKDTVRGQEETPSWEHILFTCC  164 (193)
T ss_dssp             ----HHTTEEECSCGGGBCCSE-EEESSSCCCSSCSSCSSEEEEECCG
T ss_pred             ----HHHHcCCCcccEEEECCc-hhhCcHHHhhcccccccceEEEEec
Confidence                688999999999999999 688    99999 999999998764

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.82  E-value=1.5e-19  Score=151.05  Aligned_cols=171  Identities=23%  Similarity=0.208  Sum_probs=117.3

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      ...++|+||+||||++.     +.+..+++..|..........   .... .       ................+. ..
T Consensus       105 ~~~~~viFD~DgTLi~~-----~~~~~~~~~~g~~~~~~~~~~---~~~~-~-------~~~~~~~~~~~~~~l~~~-~~  167 (335)
T 3n28_A          105 TKPGLIVLDMDSTAIQI-----ECIDEIAKLAGVGEEVAEVTE---RAMQ-G-------ELDFEQSLRLRVSKLKDA-PE  167 (335)
T ss_dssp             TSCCEEEECSSCHHHHH-----HHHHHHHHHHTCHHHHHHHHH---HHHT-T-------SSCHHHHHHHHHHTTTTC-BT
T ss_pred             cCCCEEEEcCCCCCcCh-----HHHHHHHHHcCCchHHHHHHH---HHhc-C-------CCCHHHHHHHHHHHhcCC-CH
Confidence            35689999999999983     356666666665421111111   1111 0       001111112222211111 12


Q ss_pred             HHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEe----------cCCCC
Q 024886          128 DYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVI----------SSEVG  196 (261)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~----------~~~~~  196 (261)
                      +..+.+    ..  ..+++||+.++++.|++.|++++++||+... ++.+++.+|+..+|+..+.          ++.+.
T Consensus       168 ~~~~~~----~~--~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~  241 (335)
T 3n28_A          168 QILSQV----RE--TLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVV  241 (335)
T ss_dssp             THHHHH----HT--TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCC
T ss_pred             HHHHHH----HH--hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeeccccc
Confidence            222222    11  1478999999999999999999999998877 6889999999887775432          23556


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEE
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      .+||+++.|..+++++|++++++++|||+ .+|+.|++.+|+++++
T Consensus       242 ~~kpk~~~~~~~~~~lgi~~~~~v~vGDs-~nDi~~a~~aG~~va~  286 (335)
T 3n28_A          242 SAQTKADILLTLAQQYDVEIHNTVAVGDG-ANDLVMMAAAGLGVAY  286 (335)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEEEEE
T ss_pred             ChhhhHHHHHHHHHHcCCChhhEEEEeCC-HHHHHHHHHCCCeEEe
Confidence            67999999999999999999999999999 7999999999998765

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.81  E-value=9.7e-21  Score=147.91  Aligned_cols=98  Identities=16%  Similarity=0.104  Sum_probs=80.2

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecC---CCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISS---EVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~---~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .++|++.++|+.|+++|++++|+||++.. ....++.  +.++|+.++.+.   ..+..||+|+.|..+++++|+    +
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~  161 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----R  161 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----E
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----E
Confidence            46889999999999999999999998755 4444554  456677653221   245689999999999999998    9


Q ss_pred             EEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          220 VHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      ++|||+ .+|+++|+++|+.++++..+..
T Consensus       162 l~VGDs-~~Di~aA~~aG~~~i~v~~g~~  189 (211)
T 2b82_A          162 IFYGDS-DNDITAARDVGARGIRILRASN  189 (211)
T ss_dssp             EEEESS-HHHHHHHHHTTCEEEECCCCTT
T ss_pred             EEEECC-HHHHHHHHHCCCeEEEEecCCC
Confidence            999999 7999999999999999987643

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.81  E-value=1.6e-19  Score=139.17  Aligned_cols=180  Identities=17%  Similarity=0.156  Sum_probs=115.4

Q ss_pred             ccEEE-EccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchH
Q 024886           50 YDAVL-LDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDD  128 (261)
Q Consensus        50 ~k~ii-fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (261)
                      ++.++ ||+||||+|+.     .|..+.+.+|.    ..............        ...............+. ..+
T Consensus         8 mk~ivifDlDGTL~d~~-----~~~~~~~~~g~----~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~   69 (201)
T 4ap9_A            8 MKKVAVIDIEGTLTDFE-----FWREMARITGK----REIEELLEKGLSGE--------VEWLDSLLKRVGLIRGI-DEG   69 (201)
T ss_dssp             GSCEEEEECBTTTBCCC-----HHHHHHHHHCC----HHHHHHHHHHHHTS--------SCHHHHHHHHHHHTTTC-BHH
T ss_pred             cceeEEecccCCCcchH-----HHHHHHHHhCh----HHHHHHHHHHhcCC--------CCHHHHHHHHHHHhcCC-CHH
Confidence            45455 99999999876     67777777777    22222222221111        01111212221111111 111


Q ss_pred             HHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC-CCCCCHHHHH
Q 024886          129 YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG-CEKPDPRIFK  206 (261)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~-~~Kp~~~~~~  206 (261)
                      .   +.+.+.   ...++||+.++++.|++.|++++++||+... +..+ +.+|+..+++.+...++.. ..+|.+....
T Consensus        70 ~---~~~~~~---~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  142 (201)
T 4ap9_A           70 T---FLRTRE---KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKG  142 (201)
T ss_dssp             H---HHHGGG---GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHH
T ss_pred             H---HHHHHH---hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHH
Confidence            1   122222   2488999999999999999999999998876 5667 8899887766665544321 1355544566


Q ss_pred             HHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC-------CCChHHHHHhhh
Q 024886          207 AALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID-------VKTFSDVQNRIL  258 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~-------~~~~~el~~~l~  258 (261)
                      .+++.+  +++++++|||+ .+|+++|+.+|++ +++.++       ..+..|+.++|.
T Consensus       143 ~~l~~l--~~~~~i~iGD~-~~Di~~~~~ag~~-v~~~~~~~~ad~v~~~~~el~~~l~  197 (201)
T 4ap9_A          143 EFLKRF--RDGFILAMGDG-YADAKMFERADMG-IAVGREIPGADLLVKDLKELVDFIK  197 (201)
T ss_dssp             HHHGGG--TTSCEEEEECT-TCCHHHHHHCSEE-EEESSCCTTCSEEESSHHHHHHHHH
T ss_pred             HHHHhc--CcCcEEEEeCC-HHHHHHHHhCCce-EEECCCCccccEEEccHHHHHHHHH
Confidence            777777  89999999999 7999999999997 566655       346777776664

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.80  E-value=2e-21  Score=150.42  Aligned_cols=153  Identities=13%  Similarity=0.074  Sum_probs=110.8

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchH
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDD  128 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (261)
                      ++++|+||+||||+|+...+..++.+++++++ .++.+...       +        +     .... .+....    .+
T Consensus         3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~-~~~~~~~~-------~--------~-----~~~~-~~~~~~----~~   56 (197)
T 1q92_A            3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQP-FIALEDRR-------G--------F-----WVSE-QYGRLR----PG   56 (197)
T ss_dssp             CCEEEEECSBTTTBCHHHHHHHHHHHHCTTSC-CCCGGGCC-------S--------S-----CHHH-HHHHHS----TT
T ss_pred             CceEEEEeCCCCCccCcHHHHHHHHHHHhcCC-CCCHHHhc-------C--------C-----cHHH-HHHhcC----HH
Confidence            46899999999999998888888888877652 23322110       0        0     0111 111111    11


Q ss_pred             HHHHHHHHHhh---CCceeeCccHHHHHHHHHHC-CCeEEEEeCCchH-HHHHHHhcCccc-ccceEEecCCCCCCCCCH
Q 024886          129 YFEEVYEYYAK---GEAWHLPHGAYQSILLLKDA-GVKVAVVSNFDTR-LRKLLKDLNVID-LFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       129 ~~~~~~~~~~~---~~~~~~~~g~~~~l~~L~~~-g~~i~i~T~~~~~-~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~~  202 (261)
                      ..+++.+.|..   .....++||+.++|+.|++. |++++|+||++.. ++..++.+|+.. +|+               
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~---------------  121 (197)
T 1q92_A           57 LSEKAISIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG---------------  121 (197)
T ss_dssp             HHHHHHHHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC---------------
T ss_pred             HHHHHHHHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch---------------
Confidence            12233334432   12358899999999999999 9999999998876 678889999887 886               


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhh----hHHHH-hCCCeEEEECCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKAD----KQGAN-SLGIDCWLWGID  246 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~D----i~~a~-~~G~~~i~v~~~  246 (261)
                         ..+++++|++|+++++|||+ ..|    +++|+ ++|+.++++.++
T Consensus       122 ---~~~~~~l~~~~~~~~~vgDs-~~dD~~~~~~a~~~aG~~~i~~~~~  166 (197)
T 1q92_A          122 ---PDFLEQIVLTRDKTVVSADL-LIDDRPDITGAEPTPSWEHVLFTAC  166 (197)
T ss_dssp             ---GGGGGGEEECSCSTTSCCSE-EEESCSCCCCSCSSCSSEEEEECCT
T ss_pred             ---HHHHHHhccCCccEEEECcc-cccCCchhhhcccCCCceEEEecCc
Confidence               45788899999999999999 688    99999 999999998764

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.79  E-value=2.9e-20  Score=150.68  Aligned_cols=109  Identities=17%  Similarity=0.162  Sum_probs=88.7

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HH---HHHHhcCcccccceEEecCC-CCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LR---KLLKDLNVIDLFDAVVISSE-VGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~---~~l~~~gl~~~f~~i~~~~~-~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      .+++++.++++.| ..|+++ ++||.+.. ..   ..++..++..+|+.+++.+. .+.+||++.+|+.+++.+|++|++
T Consensus       137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e  214 (271)
T 1vjr_A          137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKER  214 (271)
T ss_dssp             CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGG
T ss_pred             cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCce
Confidence            4578899999999 778988 88987643 11   13344456677888887787 889999999999999999999999


Q ss_pred             EEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          219 TVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                      +++|||++.+|++||+.+|+.++++.++....+++.
T Consensus       215 ~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~  250 (271)
T 1vjr_A          215 MAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLE  250 (271)
T ss_dssp             EEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHH
T ss_pred             EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHh
Confidence            999999834999999999999999988866655543

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.79  E-value=1.1e-19  Score=148.75  Aligned_cols=90  Identities=18%  Similarity=0.251  Sum_probs=76.9

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      .+++||+.++|+.|++.|++++|+||++.. +..+++.+|+..+|+.++         |.  ....+++.++.. ++|++
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~---------~~--~K~~~~~~l~~~-~~~~~  229 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL---------PH--QKSEEVKKLQAK-EVVAF  229 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC---------TT--CHHHHHHHHTTT-CCEEE
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC---------hH--HHHHHHHHHhcC-CeEEE
Confidence            368999999999999999999999999877 789999999988887664         11  226788889999 99999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |||+ .+|+.+|+++|+. +.++++
T Consensus       230 vGDs-~~Di~~a~~ag~~-v~~~~~  252 (287)
T 3a1c_A          230 VGDG-INDAPALAQADLG-IAVGSG  252 (287)
T ss_dssp             EECT-TTCHHHHHHSSEE-EEECCC
T ss_pred             EECC-HHHHHHHHHCCee-EEeCCC
Confidence            9999 7999999999998 566554

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.78  E-value=2e-19  Score=145.30  Aligned_cols=106  Identities=13%  Similarity=0.177  Sum_probs=89.3

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-H--HHHHHh-cCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-L--RKLLKD-LNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~--~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .++|++.++++.|+ .|+++ ++||.+.. .  ...+.. .++..+|+.+++++....+||+|.+|+.++++  ++|+++
T Consensus       130 ~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~  205 (263)
T 1zjj_A          130 LTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEEL  205 (263)
T ss_dssp             CBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEE
T ss_pred             CCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccE
Confidence            56899999999999 88998 99998764 2  233433 55777889999888888999999999999999  999999


Q ss_pred             EEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          220 VHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      ++|||++.+|+.+|+++|+.+++|.++.....++
T Consensus       206 ~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~  239 (263)
T 1zjj_A          206 WMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDI  239 (263)
T ss_dssp             EEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHH
T ss_pred             EEECCChHHHHHHHHHcCCeEEEECCCCCChHHH
Confidence            9999995599999999999999998886655544

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.78  E-value=1.5e-19  Score=140.94  Aligned_cols=85  Identities=16%  Similarity=0.251  Sum_probs=75.6

Q ss_pred             HHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          152 SILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      +|+.|++.|++++|+|+.+.. +..+++.+|+..+|+.+         ||++..+..+++++|++++++++|||+ .+|+
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs-~nDi  153 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDD-LIDW  153 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECS-GGGH
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc---------CChHHHHHHHHHHcCcCcceEEEEcCC-HHHH
Confidence            899999999999999998877 79999999998777643         889999999999999999999999999 8999


Q ss_pred             HHHHhCCCeEEEECCCC
Q 024886          231 QGANSLGIDCWLWGIDV  247 (261)
Q Consensus       231 ~~a~~~G~~~i~v~~~~  247 (261)
                      ++++.+|+.+ .+.++.
T Consensus       154 ~~~~~ag~~~-a~~~~~  169 (211)
T 3ij5_A          154 PVMAQVGLSV-AVADAH  169 (211)
T ss_dssp             HHHTTSSEEE-ECTTSC
T ss_pred             HHHHHCCCEE-EeCCcc
Confidence            9999999886 454553

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.77  E-value=1.5e-20  Score=142.75  Aligned_cols=83  Identities=13%  Similarity=0.203  Sum_probs=72.6

Q ss_pred             HHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          152 SILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      +|+.|++.|++++|+|+.... ++.+++.+|+. +|..         .||++..+..+++.+|++++++++|||+ .+|+
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~~---------~~~k~~~l~~~~~~~~~~~~~~~~vGD~-~nD~  115 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLHG---------IDRKDLALKQWCEEQGIAPERVLYVGND-VNDL  115 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEES---------CSCHHHHHHHHHHHHTCCGGGEEEEECS-GGGH
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEeC---------CCChHHHHHHHHHHcCCCHHHEEEEcCC-HHHH
Confidence            889999999999999998876 79999999986 3322         2999999999999999999999999999 7999


Q ss_pred             HHHHhCCCeEEEECCC
Q 024886          231 QGANSLGIDCWLWGID  246 (261)
Q Consensus       231 ~~a~~~G~~~i~v~~~  246 (261)
                      ++++.+|+.+ .++++
T Consensus       116 ~~~~~ag~~v-~~~~~  130 (176)
T 3mmz_A          116 PCFALVGWPV-AVASA  130 (176)
T ss_dssp             HHHHHSSEEE-ECTTC
T ss_pred             HHHHHCCCeE-ECCCh
Confidence            9999999876 45454

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.77  E-value=3.6e-19  Score=133.54  Aligned_cols=81  Identities=20%  Similarity=0.289  Sum_probs=73.3

Q ss_pred             HHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          152 SILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      +++.|++.|++++++||.+.. ++.+++.+|+..+|+.         .||++..+..+++++|++|+++++|||+ .+|+
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~-~~Di  108 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG---------VVDKLSAAEELCNELGINLEQVAYIGDD-LNDA  108 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCS-GGGH
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc---------cCChHHHHHHHHHHcCCCHHHEEEECCC-HHHH
Confidence            789999999999999998866 7999999998766654         3999999999999999999999999999 7999


Q ss_pred             HHHHhCCCeEEE
Q 024886          231 QGANSLGIDCWL  242 (261)
Q Consensus       231 ~~a~~~G~~~i~  242 (261)
                      .+|+.+|+.++.
T Consensus       109 ~~~~~ag~~~~~  120 (164)
T 3e8m_A          109 KLLKRVGIAGVP  120 (164)
T ss_dssp             HHHTTSSEEECC
T ss_pred             HHHHHCCCeEEc
Confidence            999999998753

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.77  E-value=2.8e-19  Score=136.30  Aligned_cols=91  Identities=26%  Similarity=0.265  Sum_probs=78.9

Q ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEc
Q 024886          145 LPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIG  223 (261)
Q Consensus       145 ~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iG  223 (261)
                      +.+...++|+.|+++|++++++||.+.. +..+++.+|+..+|+.         .||++..++.+++++|++|+++++||
T Consensus        36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vG  106 (180)
T 1k1e_A           36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG---------KLEKETACFDLMKQAGVTAEQTAYIG  106 (180)
T ss_dssp             EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES---------CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred             eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC---------CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence            4456668999999999999999998876 7899999998766532         59999999999999999999999999


Q ss_pred             CCchhhhHHHHhCCCeEEEECCC
Q 024886          224 DDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       224 D~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |+ .+|+.+++.+|+.++ +.++
T Consensus       107 D~-~~Di~~~~~ag~~~~-~~~~  127 (180)
T 1k1e_A          107 DD-SVDLPAFAACGTSFA-VADA  127 (180)
T ss_dssp             CS-GGGHHHHHHSSEEEE-CTTS
T ss_pred             CC-HHHHHHHHHcCCeEE-eCCc
Confidence            99 799999999999875 4444

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.77  E-value=1.2e-19  Score=148.22  Aligned_cols=106  Identities=21%  Similarity=0.323  Sum_probs=91.2

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCchH-H--H--HHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHc----CCCCCc
Q 024886          148 GAYQSILLLKDAGVKVAVVSNFDTR-L--R--KLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQM----SVEASR  218 (261)
Q Consensus       148 g~~~~l~~L~~~g~~i~i~T~~~~~-~--~--~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l----~~~~~~  218 (261)
                      ....+++.|++.|++ +|+||.+.. .  .  .+++..++..+|+.+++++..+.+||+|.+|+.+++++    |++|++
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~  227 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKRE  227 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGG
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcce
Confidence            555667788999999 999998765 3  2  12356678889999999998889999999999999999    999999


Q ss_pred             EEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          219 TVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                      ++||||++.+|+.+|+++|+.++++.++.....++.
T Consensus       228 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~  263 (284)
T 2hx1_A          228 ILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAE  263 (284)
T ss_dssp             EEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHH
T ss_pred             EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHH
Confidence            999999945999999999999999999887777765

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.77  E-value=2.4e-18  Score=147.51  Aligned_cols=96  Identities=21%  Similarity=0.254  Sum_probs=86.6

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCc------------hH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFD------------TR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALD  210 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~------------~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  210 (261)
                      .++||+.++|+.|+++|++++|+||..            .. +..+++.+|+.  |+.++++++....||+|.+|..+++
T Consensus        87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~  164 (416)
T 3zvl_A           87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE  164 (416)
T ss_dssp             ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHH
T ss_pred             hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHH
Confidence            479999999999999999999999965            12 46778888984  9999999999999999999999999


Q ss_pred             HcC----CCCCcEEEEcCCc----------------hhhhHHHHhCCCeEE
Q 024886          211 QMS----VEASRTVHIGDDE----------------KADKQGANSLGIDCW  241 (261)
Q Consensus       211 ~l~----~~~~~~l~iGD~~----------------~~Di~~a~~~G~~~i  241 (261)
                      ++|    ++|++|+||||+.                ..|+.+|.++|+.++
T Consensus       165 ~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~  215 (416)
T 3zvl_A          165 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  215 (416)
T ss_dssp             HSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEE
T ss_pred             HhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCccc
Confidence            998    9999999999994                389999999999986

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.77  E-value=2.3e-19  Score=137.76  Aligned_cols=84  Identities=20%  Similarity=0.303  Sum_probs=74.8

Q ss_pred             HHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          152 SILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      +|+.|++.|++++|+||.... ++.+++.+|+..+|+.+         +++++.+..+++.+|++++++++|||+ .+|+
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~-~nDi  123 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDD-LPDL  123 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECS-GGGH
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc---------CChHHHHHHHHHHcCCChhHEEEECCC-HHHH
Confidence            889999999999999998877 79999999998777654         677789999999999999999999999 8999


Q ss_pred             HHHHhCCCeEEEECCC
Q 024886          231 QGANSLGIDCWLWGID  246 (261)
Q Consensus       231 ~~a~~~G~~~i~v~~~  246 (261)
                      ++++.+|+.+ .++++
T Consensus       124 ~~~~~ag~~~-~~~~~  138 (189)
T 3mn1_A          124 PVIRRVGLGM-AVANA  138 (189)
T ss_dssp             HHHHHSSEEE-ECTTS
T ss_pred             HHHHHCCCeE-EeCCc
Confidence            9999999876 45444

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.77  E-value=5.1e-19  Score=136.25  Aligned_cols=86  Identities=14%  Similarity=0.263  Sum_probs=75.2

Q ss_pred             HHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhh
Q 024886          151 QSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKAD  229 (261)
Q Consensus       151 ~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~D  229 (261)
                      ..++.|++.|++++|+||.... +..+++.+|+..+|+.         .||++..+..+++.+|++++++++|||+ .+|
T Consensus        59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~-~nD  128 (195)
T 3n07_A           59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDD-LID  128 (195)
T ss_dssp             HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESS-GGG
T ss_pred             HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCC-HHH
Confidence            3588899999999999998877 7999999998766543         3999999999999999999999999999 799


Q ss_pred             hHHHHhCCCeEEEECCCC
Q 024886          230 KQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       230 i~~a~~~G~~~i~v~~~~  247 (261)
                      +++++.+|+.+ .++++.
T Consensus       129 i~~~~~ag~~v-a~~na~  145 (195)
T 3n07_A          129 WPVMEKVALRV-CVADGH  145 (195)
T ss_dssp             HHHHTTSSEEE-ECTTSC
T ss_pred             HHHHHHCCCEE-EECChH
Confidence            99999999876 565553

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.76  E-value=9.4e-20  Score=150.43  Aligned_cols=111  Identities=16%  Similarity=0.193  Sum_probs=94.2

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-H--H-HHHHhcC-cccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-L--R-KLLKDLN-VIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~--~-~~l~~~g-l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      .++|++.++++.|++.|+ ++++||.+.. .  . ..+...| +..+|+.+++++..+.+||++.+|+.+++.+|++|++
T Consensus       156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~e  234 (306)
T 2oyc_A          156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPAR  234 (306)
T ss_dssp             CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGGG
T ss_pred             CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChHH
Confidence            457899999999999888 9999997754 2  1 3444555 6778888888888889999999999999999999999


Q ss_pred             EEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          219 TVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      +++|||++.+|+++|+.+|+.+++|.++.....++.+
T Consensus       235 ~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~  271 (306)
T 2oyc_A          235 TLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQA  271 (306)
T ss_dssp             EEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHH
T ss_pred             EEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHh
Confidence            9999999449999999999999999998777666643

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.76  E-value=1.8e-19  Score=146.35  Aligned_cols=101  Identities=17%  Similarity=0.207  Sum_probs=79.3

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      .++||+.++|+.|++.|++++++||.... +..+++.+|+..+|+.++..+..       ...+...+.+     ++++|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k~-------~~~k~~~~~~-----~~~~v  211 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEKA-------EKVKEVQQKY-----VTAMV  211 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGHH-------HHHHHHHTTS-----CEEEE
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHHH-------HHHHHHHhcC-----CEEEE
Confidence            68999999999999999999999998877 78999999999999888765433       3344444433     78999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCC-------------CCChHHHHHhhh
Q 024886          223 GDDEKADKQGANSLGIDCWLWGID-------------VKTFSDVQNRIL  258 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~-------------~~~~~el~~~l~  258 (261)
                      ||+ .+|+++++.+|+.+ .++++             ..+..++.+++.
T Consensus       212 GD~-~nDi~~~~~Ag~~v-a~~~~~~~~~~~a~~~~~~~~~~~l~~~l~  258 (280)
T 3skx_A          212 GDG-VNDAPALAQADVGI-AIGAGTDVAVETADIVLVRNDPRDVAAIVE  258 (280)
T ss_dssp             ECT-TTTHHHHHHSSEEE-ECSCCSSSCCCSSSEECSSCCTHHHHHHHH
T ss_pred             eCC-chhHHHHHhCCceE-EecCCcHHHHhhCCEEEeCCCHHHHHHHHH
Confidence            999 79999999999754 56655             245666666553

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.75  E-value=5.3e-19  Score=135.95  Aligned_cols=84  Identities=15%  Similarity=0.290  Sum_probs=75.3

Q ss_pred             HHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          152 SILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      .++.|++.|++++|+||.+.. +..+++.+|+..+|+.+         ||++..+..+++.+|++++++++|||+ .+|+
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~-~~Di  123 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDD-LPDL  123 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECS-GGGH
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC---------CChHHHHHHHHHHhCCCHHHEEEECCC-HHHH
Confidence            588899999999999998877 78999999998766644         999999999999999999999999999 7999


Q ss_pred             HHHHhCCCeEEEECCC
Q 024886          231 QGANSLGIDCWLWGID  246 (261)
Q Consensus       231 ~~a~~~G~~~i~v~~~  246 (261)
                      .+++.+|+.+ .+.++
T Consensus       124 ~~~~~ag~~~-~~~~~  138 (191)
T 3n1u_A          124 PLIQQVGLGV-AVSNA  138 (191)
T ss_dssp             HHHHHSSEEE-ECTTC
T ss_pred             HHHHHCCCEE-EeCCc
Confidence            9999999987 56555

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.73  E-value=4.6e-18  Score=137.15  Aligned_cols=100  Identities=22%  Similarity=0.200  Sum_probs=73.5

Q ss_pred             CccHHHHHHHHHHC-CCeEEEEeCCchH-HHHHHHhcCcccccc---eEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 024886          146 PHGAYQSILLLKDA-GVKVAVVSNFDTR-LRKLLKDLNVIDLFD---AVVISSEVGCEKPDPRIFKAALDQMSVEASRTV  220 (261)
Q Consensus       146 ~~g~~~~l~~L~~~-g~~i~i~T~~~~~-~~~~l~~~gl~~~f~---~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  220 (261)
                      ++++.+.++.+++. |+++ ++|+.... ....+...++..+|+   ..+..+..+.+||++.+|+.+++.+|+++++++
T Consensus       133 ~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i  211 (271)
T 2x4d_A          133 YQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAV  211 (271)
T ss_dssp             HHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             HHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEE
Confidence            45667777777776 7777 66654432 222222333333332   333445566789999999999999999999999


Q ss_pred             EEcCCch-hhhHHHHhCCCeEEEECCCC
Q 024886          221 HIGDDEK-ADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       221 ~iGD~~~-~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +|||+ . +|++||+.+|+.+++|.++.
T Consensus       212 ~iGD~-~~nDi~~a~~aG~~~~~v~~g~  238 (271)
T 2x4d_A          212 MIGDD-IVGDVGGAQRCGMRALQVRTGK  238 (271)
T ss_dssp             EEESC-TTTTHHHHHHTTCEEEEESSTT
T ss_pred             EECCC-cHHHHHHHHHCCCcEEEEcCCC
Confidence            99999 6 99999999999999998763

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.72  E-value=6.1e-17  Score=130.72  Aligned_cols=67  Identities=24%  Similarity=0.278  Sum_probs=58.1

Q ss_pred             eEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          188 AVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       188 ~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                      .++..+..+.+||++.+|+.+++++|++++++++|||++.+|+++|+++|+.+++|.++....+++.
T Consensus       171 ~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~  237 (264)
T 3epr_A          171 AATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVP  237 (264)
T ss_dssp             HHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGG
T ss_pred             HHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHH
Confidence            3344556678999999999999999999999999999855999999999999999999877766654

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.71  E-value=2.4e-17  Score=134.88  Aligned_cols=110  Identities=11%  Similarity=0.163  Sum_probs=87.1

Q ss_pred             eeCccHHHHHHHHHHC-CCeEEEEeCC---------------------chH-HHHHHHhcCcccccceE----------E
Q 024886          144 HLPHGAYQSILLLKDA-GVKVAVVSNF---------------------DTR-LRKLLKDLNVIDLFDAV----------V  190 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~-g~~i~i~T~~---------------------~~~-~~~~l~~~gl~~~f~~i----------~  190 (261)
                      ...+++.++++.+++. |+++.+.|+.                     ... +..+++..|+..+|...          +
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence            4467899999999887 8999998875                     223 56778888887667654          5


Q ss_pred             ecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          191 ISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       191 ~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      ..+..+.++|++..+..+++.+|++++++++|||+ .+|+.+++.+|+. +.++++...+.+.++
T Consensus       202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs-~~D~~~~~~ag~~-~~~~~~~~~~~~~a~  264 (289)
T 3gyg_A          202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDS-GNDVRMLQTVGNG-YLLKNATQEAKNLHN  264 (289)
T ss_dssp             EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHTTSSEE-EECTTCCHHHHHHCC
T ss_pred             EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCC-HHHHHHHHhCCcE-EEECCccHHHHHhCC
Confidence            55666788999999999999999999999999999 8999999999966 467776444444333

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.71  E-value=1.8e-16  Score=128.06  Aligned_cols=60  Identities=25%  Similarity=0.363  Sum_probs=53.1

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                      ...+||++.+|+.+++++|++++++++|||++.+|+++|+.+|+.+++|..+....+++.
T Consensus       183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~  242 (268)
T 3qgm_A          183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLD  242 (268)
T ss_dssp             EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHH
T ss_pred             eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHH
Confidence            557899999999999999999999999999845999999999999999988866555544

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.70  E-value=7.5e-17  Score=123.64  Aligned_cols=86  Identities=14%  Similarity=0.235  Sum_probs=74.7

Q ss_pred             HHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          152 SILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      +|+.|++.|++++|+||.+.. +..+++.+|+..+|+         ..||++..+..+++++|++++++++|||+ .+|+
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~---------~~kpk~~~~~~~~~~~g~~~~~~~~iGD~-~~Di  130 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQ---------GQSNKLIAFSDLLEKLAIAPENVAYVGDD-LIDW  130 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEEC---------SCSCSHHHHHHHHHHHTCCGGGEEEEESS-GGGH
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeec---------CCCCCHHHHHHHHHHcCCCHHHEEEECCC-HHHH
Confidence            889999999999999998876 788999999875553         25999999999999999999999999999 7999


Q ss_pred             HHHHhCCCeEEEECCCCC
Q 024886          231 QGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       231 ~~a~~~G~~~i~v~~~~~  248 (261)
                      .+++.+|+.++ +.++..
T Consensus       131 ~~a~~ag~~~~-~~~~~~  147 (188)
T 2r8e_A          131 PVMEKVGLSVA-VADAHP  147 (188)
T ss_dssp             HHHTTSSEEEE-CTTSCT
T ss_pred             HHHHHCCCEEE-ecCcCH
Confidence            99999999875 444433

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.69  E-value=2.8e-17  Score=132.73  Aligned_cols=66  Identities=21%  Similarity=0.259  Sum_probs=53.3

Q ss_pred             cceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChH
Q 024886          186 FDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFS  251 (261)
Q Consensus       186 f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~  251 (261)
                      |+.++..+....+||++.+|+.+++.+|++++++++|||++.+|++||+.+|+.++++..+....+
T Consensus       170 ~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~  235 (266)
T 3pdw_A          170 LTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKRE  235 (266)
T ss_dssp             HHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC-----
T ss_pred             HHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChH
Confidence            334444556678999999999999999999999999999856999999999999999987644433

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.69  E-value=7.2e-17  Score=122.79  Aligned_cols=157  Identities=12%  Similarity=0.122  Sum_probs=99.5

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchH
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDD  128 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (261)
                      ++++|+||+||||+|+...+..++.+   .+|..++.+...       +.....          .    .    +....+
T Consensus         3 m~~~viFD~DGtL~Ds~~~~~~~~~~---~~g~~~~~~~~~-------g~~~~~----------~----~----~~~~~~   54 (180)
T 3bwv_A            3 TRQRIAIDMDEVLADTLGAVVKAVNE---RADLNIKMESLN-------GKKLKH----------M----I----PEHEGL   54 (180)
T ss_dssp             CCCEEEEETBTTTBCHHHHHHHHHHH---HSCCCCCGGGCT-------TCCC--------------------------CH
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHH---HhCCCCCHHHHc-------CccHHH----------H----C----CchHHH
Confidence            35899999999999998777666665   567665543211       111100          0    0    000111


Q ss_pred             HHHHHHH-HHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCC---chH---HHHHHHh-cCcccccceEEecCCCCCCCC
Q 024886          129 YFEEVYE-YYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNF---DTR---LRKLLKD-LNVIDLFDAVVISSEVGCEKP  200 (261)
Q Consensus       129 ~~~~~~~-~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~---~~~---~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp  200 (261)
                      +...... .+.  ...+++||+.++|+.|++. ++++|+||+   +..   ....+.. ++...+++.+++.++.     
T Consensus        55 ~~~~~~~~~~~--~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-----  126 (180)
T 3bwv_A           55 VMDILKEPGFF--RNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-----  126 (180)
T ss_dssp             HHHHHHSTTGG--GSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-----
T ss_pred             HHHHHhCcchh--ccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-----
Confidence            1111111 111  1358899999999999985 999999998   322   1444555 5666778888877651     


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC----------CCChHHHHHhhhc
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID----------VKTFSDVQNRILI  259 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~----------~~~~~el~~~l~~  259 (261)
                                .+    ++|++|||+ .+|+.  ..+| .++++..+          +.++.||.+.|.+
T Consensus       127 ----------~l----~~~l~ieDs-~~~i~--~aaG-~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~  177 (180)
T 3bwv_A          127 ----------II----LADYLIDDN-PKQLE--IFEG-KSIMFTASHNVYEHRFERVSGWRDVKNYFNS  177 (180)
T ss_dssp             ----------GB----CCSEEEESC-HHHHH--HCSS-EEEEECCGGGTTCCSSEEECSHHHHHHHHHH
T ss_pred             ----------ee----cccEEecCC-cchHH--HhCC-CeEEeCCCcccCCCCceecCCHHHHHHHHHH
Confidence                      11    779999999 79985  4589 99988754          5567777776653

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.66  E-value=1.7e-16  Score=119.06  Aligned_cols=88  Identities=15%  Similarity=0.202  Sum_probs=71.4

Q ss_pred             HHHHHHHCCCeEEEEeCCchHHHHHHH--hcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhh
Q 024886          152 SILLLKDAGVKVAVVSNFDTRLRKLLK--DLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKAD  229 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~~~~~l~--~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~D  229 (261)
                      .|+.|++.|++++|+|+. ..+..+++  .+|+. +    +.     ..++++..+..+++++|++|+++++|||+ .+|
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~-~~~~~~l~~l~lgi~-~----~~-----g~~~K~~~l~~~~~~~gi~~~~~~~vGD~-~nD  111 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER-ACSKQTLSALKLDCK-T----EV-----SVSDKLATVDEWRKEMGLCWKEVAYLGNE-VSD  111 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS-CCCHHHHHTTCCCCC-E----EC-----SCSCHHHHHHHHHHHTTCCGGGEEEECCS-GGG
T ss_pred             HHHHHHHCCCEEEEEeCc-HHHHHHHHHhCCCcE-E----EE-----CCCChHHHHHHHHHHcCcChHHEEEEeCC-HhH
Confidence            689999999999999998 44788888  55653 2    22     13678899999999999999999999999 899


Q ss_pred             hHHHHhCCCeEEEECCCCCChHH
Q 024886          230 KQGANSLGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       230 i~~a~~~G~~~i~v~~~~~~~~e  252 (261)
                      +.+++.+|+.+ .+.++.+.+.+
T Consensus       112 i~~~~~ag~~~-a~~na~~~~k~  133 (168)
T 3ewi_A          112 EECLKRVGLSA-VPADACSGAQK  133 (168)
T ss_dssp             HHHHHHSSEEE-ECTTCCHHHHT
T ss_pred             HHHHHHCCCEE-EeCChhHHHHH
Confidence            99999999886 57666433333

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.65  E-value=2.6e-16  Score=128.61  Aligned_cols=111  Identities=9%  Similarity=0.079  Sum_probs=77.2

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhc-CcccccceEEec----CCCCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDL-NVIDLFDAVVIS----SEVGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~-gl~~~f~~i~~~----~~~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      .++++..+++..+....+++.+ +........+.+.+ +..+.+..+.+.    +-...+.+++.+++.+++++|+++++
T Consensus       142 ~~~~~~~~~~~~~~~~~~ki~~-~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~  220 (290)
T 3dnp_A          142 QFVESLSDLLMDEPVSAPVIEV-YTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDD  220 (290)
T ss_dssp             EECSCHHHHHHHSCCCCSEEEE-ECCGGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGG
T ss_pred             cccCCHHHHHhcCCCCceEEEE-eCCHHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHH
Confidence            4567777888777777788854 44444444444432 122234433332    23446778889999999999999999


Q ss_pred             EEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          219 TVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +++|||+ .||++|++.+|+++ .++++.+.+++.++++
T Consensus       221 ~i~~GD~-~NDi~m~~~ag~~v-am~na~~~~k~~Ad~v  257 (290)
T 3dnp_A          221 VVAIGHQ-YDDLPMIELAGLGV-AMGNAVPEIKRKADWV  257 (290)
T ss_dssp             EEEEECS-GGGHHHHHHSSEEE-ECTTSCHHHHHHSSEE
T ss_pred             EEEECCc-hhhHHHHHhcCCEE-EecCCcHHHHHhcCEE
Confidence            9999999 89999999999755 7888766555555544

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.64  E-value=1.3e-15  Score=123.67  Aligned_cols=106  Identities=12%  Similarity=0.111  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcC--cccccceEEec----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          149 AYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLN--VIDLFDAVVIS----SEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       149 ~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~g--l~~~f~~i~~~----~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      +.++.+.++....++.++++ ......+.+.+.  +...+..+.+.    +....+++++.+++.+++.+|++++++++|
T Consensus       141 ~~~~~~~~~~~~~ki~~~~~-~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~  219 (279)
T 4dw8_A          141 TNDFLTDITLPVAKCLIVGD-AGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAI  219 (279)
T ss_dssp             CSCHHHHSCSCCSCEEEESC-HHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred             HHHHHHhhcCCceEEEEeCC-HHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEE
Confidence            33444455555677766654 333333333321  22334444443    335567788999999999999999999999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ||+ .||++|++.+|+++ .++++.+.+.+.++++
T Consensus       220 GD~-~NDi~m~~~ag~~v-am~na~~~~k~~A~~v  252 (279)
T 4dw8_A          220 GDG-YNDLSMIKFAGMGV-AMGNAQEPVKKAADYI  252 (279)
T ss_dssp             ECS-GGGHHHHHHSSEEE-ECTTSCHHHHHHCSEE
T ss_pred             CCC-hhhHHHHHHcCcEE-EcCCCcHHHHHhCCEE
Confidence            999 89999999999654 7888866666655554

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.44  E-value=1.9e-17  Score=133.58  Aligned_cols=91  Identities=16%  Similarity=0.260  Sum_probs=79.0

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      .+++||+.++|+.|++.|++++++||.+.. +..+++.+|+.++|+.++           |+.+..+++.++.++++++|
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~-----------p~~k~~~~~~l~~~~~~~~~  203 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS-----------PEDKVRIIEKLKQNGNKVLM  203 (263)
Confidence            368999999999999999999999998877 789999999998888775           23567789999999999999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |||+ .+|+.+++.+|+.. .++++
T Consensus       204 VGD~-~~D~~aa~~Agv~v-a~g~~  226 (263)
T 2yj3_A          204 IGDG-VNDAAALALADVSV-AMGNG  226 (263)
Confidence            9999 89999999999875 34444

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.61  E-value=4.2e-15  Score=117.56  Aligned_cols=80  Identities=15%  Similarity=0.177  Sum_probs=61.3

Q ss_pred             EEEEe-CCchH-HHHHHHhcCcccccceEEec----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhC
Q 024886          163 VAVVS-NFDTR-LRKLLKDLNVIDLFDAVVIS----SEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSL  236 (261)
Q Consensus       163 i~i~T-~~~~~-~~~~l~~~gl~~~f~~i~~~----~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~  236 (261)
                      +.+++ +.+.. +..+++.++  ..|+.+ +.    +....++|++..++.+++++|++++++++|||+ .+|+++++.+
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~-~nD~~~~~~a  188 (231)
T 1wr8_A          113 LVIMRETINVETVREIINELN--LNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG-ENDLDAFKVV  188 (231)
T ss_dssp             EEECTTTSCHHHHHHHHHHTT--CSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS-GGGHHHHHHS
T ss_pred             EEEECCCCCHHHHHHHHHhcC--CcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHc
Confidence            35555 33444 677777765  456655 33    234578999999999999999999999999999 8999999999


Q ss_pred             CCeEEEECCCC
Q 024886          237 GIDCWLWGIDV  247 (261)
Q Consensus       237 G~~~i~v~~~~  247 (261)
                      |+. +.++++.
T Consensus       189 g~~-v~~~~~~  198 (231)
T 1wr8_A          189 GYK-VAVAQAP  198 (231)
T ss_dssp             SEE-EECTTSC
T ss_pred             CCe-EEecCCC
Confidence            998 5677763

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.60  E-value=3.2e-15  Score=119.78  Aligned_cols=98  Identities=12%  Similarity=0.127  Sum_probs=75.1

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCc---hH-HHHHHHhcCcc--cccceEEecCCCCCCCCCHHHHHHHHHHcCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFD---TR-LRKLLKDLNVI--DLFDAVVISSEVGCEKPDPRIFKAALDQMSVEA  216 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~---~~-~~~~l~~~gl~--~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~  216 (261)
                      .+++||+.++|+.|++.|++++|+||.+   .. +...|+.+|+.  .+++.+++.+..  .||.+  ...+. ..+.  
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--~K~~~--~~~~~-~~~~--  172 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--KGKEK--RRELV-SQTH--  172 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--CSSHH--HHHHH-HHHE--
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--CCcHH--HHHHH-HhCC--
Confidence            4889999999999999999999999987   33 46778888987  677777776643  45554  33333 2333  


Q ss_pred             CcEEEEcCCchhhhHHHH-------h---------CCCeEEEECCCCC
Q 024886          217 SRTVHIGDDEKADKQGAN-------S---------LGIDCWLWGIDVK  248 (261)
Q Consensus       217 ~~~l~iGD~~~~Di~~a~-------~---------~G~~~i~v~~~~~  248 (261)
                      ..+++|||+ .+|+.+|.       +         +|+.++.++++..
T Consensus       173 ~~~l~VGDs-~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y  219 (258)
T 2i33_A          173 DIVLFFGDN-LSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMY  219 (258)
T ss_dssp             EEEEEEESS-GGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSS
T ss_pred             CceEEeCCC-HHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCc
Confidence            348999999 79999993       4         7999999988844

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.57  E-value=3.5e-14  Score=114.85  Aligned_cols=91  Identities=11%  Similarity=0.119  Sum_probs=65.3

Q ss_pred             eEEEEeCCchHHHHHHHhcCcccccceEEecC------CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHh
Q 024886          162 KVAVVSNFDTRLRKLLKDLNVIDLFDAVVISS------EVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANS  235 (261)
Q Consensus       162 ~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~------~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~  235 (261)
                      ++.+. .....+..+.+.++.  .|+.+.+..      ....+++++.+++.+++++|++++++++|||+ .||++|++.
T Consensus       159 ki~~~-~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~-~NDi~m~~~  234 (274)
T 3fzq_A          159 KICLW-SNEKVFDEVKDILQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDG-QNDIVMFQA  234 (274)
T ss_dssp             EEEEE-CCHHHHHHHHHHHGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCS-GGGHHHHHT
T ss_pred             EEEEE-cCHHHHHHHHHHhhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCC-hhHHHHHHh
Confidence            44444 322335666666543  244444433      35577889999999999999999999999999 899999999


Q ss_pred             CCCeEEEECCCCCChHHHHHhh
Q 024886          236 LGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       236 ~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +|+++ .++++.+.+.+.++++
T Consensus       235 ag~~v-am~na~~~~k~~A~~v  255 (274)
T 3fzq_A          235 SDVTI-AMKNSHQQLKDIATSI  255 (274)
T ss_dssp             CSEEE-EETTSCHHHHHHCSEE
T ss_pred             cCceE-EecCccHHHHHhhhhe
Confidence            99655 6888866666555544

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.56  E-value=9e-16  Score=124.70  Aligned_cols=89  Identities=12%  Similarity=0.244  Sum_probs=58.1

Q ss_pred             CCchHHHHHHHhcC--cccccceEEecCC----CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEE
Q 024886          168 NFDTRLRKLLKDLN--VIDLFDAVVISSE----VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCW  241 (261)
Q Consensus       168 ~~~~~~~~~l~~~g--l~~~f~~i~~~~~----~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i  241 (261)
                      ........+.+.+.  +...+..+.+...    .+.+.+++.+++.+++.+|++++++++|||+ .||++|++.+|+++ 
T Consensus       159 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~-~NDi~m~~~ag~~v-  236 (279)
T 3mpo_A          159 DYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQ-GNDLTMIKYAGLGV-  236 (279)
T ss_dssp             CCHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--C-CTTHHHHHHSTEEC-
T ss_pred             CCHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCc-hhhHHHHHhcCcee-
Confidence            33333555555553  2223443333322    2344557889999999999999999999999 89999999999764 


Q ss_pred             EECCCCCChHHHHHhhh
Q 024886          242 LWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       242 ~v~~~~~~~~el~~~l~  258 (261)
                      .++++.+.+++.++++.
T Consensus       237 am~na~~~~k~~A~~v~  253 (279)
T 3mpo_A          237 AMGNAIDEVKEAAQAVT  253 (279)
T ss_dssp             BC---CCHHHHHCSCBC
T ss_pred             eccCCCHHHHHhcceec
Confidence            78888777777766653

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.55  E-value=1.2e-15  Score=124.47  Aligned_cols=96  Identities=9%  Similarity=0.043  Sum_probs=67.5

Q ss_pred             HCCCeEEEEe-CCch-HH-HHHHHhcCcccccceEEecC----CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          158 DAGVKVAVVS-NFDT-RL-RKLLKDLNVIDLFDAVVISS----EVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       158 ~~g~~i~i~T-~~~~-~~-~~~l~~~gl~~~f~~i~~~~----~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      ...+++.++. .... .. ..+.+.++  ..+..+.+..    -...+.+++.+++.+++.+|++++++++|||+ .||+
T Consensus       164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~-~NDi  240 (283)
T 3dao_A          164 NDIIKFTVFHPDKCEELCTPVFIPAWN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDN-LNDI  240 (283)
T ss_dssp             SCCCEEEEECSSCHHHHHTTTHHHHHT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGH
T ss_pred             cCceEEEEEcChHHHHHHHHHHHHHhc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCC-HHHH
Confidence            4567888873 2222 22 33334443  2344444432    24456778889999999999999999999999 8999


Q ss_pred             HHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          231 QGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       231 ~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +|++.+|++ +.++++.+.+++.++++
T Consensus       241 ~ml~~ag~~-vam~na~~~~k~~A~~v  266 (283)
T 3dao_A          241 EMLQNAGIS-YAVSNARQEVIAAAKHT  266 (283)
T ss_dssp             HHHHHSSEE-EEETTSCHHHHHHSSEE
T ss_pred             HHHHhCCCE-EEcCCCCHHHHHhcCeE
Confidence            999999965 58889877777666655

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.54  E-value=2.5e-16  Score=127.61  Aligned_cols=96  Identities=11%  Similarity=0.120  Sum_probs=68.9

Q ss_pred             HHCCCeEEEEeCCchHHHHHHHhcC--cccccceEEec----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          157 KDAGVKVAVVSNFDTRLRKLLKDLN--VIDLFDAVVIS----SEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       157 ~~~g~~i~i~T~~~~~~~~~l~~~g--l~~~f~~i~~~----~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      ++.++++.++++.. ....+++.++  +...|+.+.+.    +....+++++.+++.+++.+|++++++++|||+ .||+
T Consensus       143 ~~~~~ki~i~~~~~-~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~-~nD~  220 (271)
T 1rlm_A          143 DDVLFKFSLNLPDE-QIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDS-GNDA  220 (271)
T ss_dssp             CSCEEEEEEECCGG-GHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGH
T ss_pred             CCceEEEEEEcCHH-HHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCc-HHHH
Confidence            34567788877643 2444444433  34456665554    334578899999999999999999999999999 8999


Q ss_pred             HHHHhCCCeEEEECCCCCChHHHHH
Q 024886          231 QGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       231 ~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      +|++.+|+.+ .++++...+.+.++
T Consensus       221 ~m~~~ag~~v-a~~na~~~~k~~a~  244 (271)
T 1rlm_A          221 EMLKMARYSF-AMGNAAENIKQIAR  244 (271)
T ss_dssp             HHHHHCSEEE-ECTTCCHHHHHHCS
T ss_pred             HHHHHcCCeE-EeCCccHHHHHhCC
Confidence            9999999864 68777544444333

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.52  E-value=2.5e-14  Score=117.77  Aligned_cols=93  Identities=9%  Similarity=0.031  Sum_probs=63.6

Q ss_pred             eEEEEeCCchHHHHHHHhcC--ccc-ccceEEecC----CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHH
Q 024886          162 KVAVVSNFDTRLRKLLKDLN--VID-LFDAVVISS----EVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGAN  234 (261)
Q Consensus       162 ~i~i~T~~~~~~~~~l~~~g--l~~-~f~~i~~~~----~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~  234 (261)
                      ++.+.+ .......+++.+.  +.. .++.+.+..    -...+.+++.+++.+++.+|++++++++|||+ .||++|++
T Consensus       184 ki~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs-~NDi~m~~  261 (304)
T 3l7y_A          184 KLTLQV-KEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDG-GNDIEMLK  261 (304)
T ss_dssp             EEEEEC-CGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHH
T ss_pred             EEEEEc-CHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCC-HHHHHHHH
Confidence            444444 3333444444432  333 344444332    23456778889999999999999999999999 89999999


Q ss_pred             hCCCeEEEECCCCCChHHHHHhh
Q 024886          235 SLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       235 ~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      .+|+++ .++++.+.+++.++++
T Consensus       262 ~ag~~v-am~na~~~~k~~Ad~v  283 (304)
T 3l7y_A          262 LAKYSY-AMANAPKNVKAAANYQ  283 (304)
T ss_dssp             HCTEEE-ECTTSCHHHHHHCSEE
T ss_pred             hcCCeE-EcCCcCHHHHHhccEE
Confidence            999664 7888866666655544

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.51  E-value=1.3e-14  Score=111.31  Aligned_cols=98  Identities=8%  Similarity=0.030  Sum_probs=86.5

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      ..++||+.++|+.+++. ++++|+|++... ++.+++.+++..+|+.+++.++....|   ..|...++.+|.++++|++
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~vi  142 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKVII  142 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGEEE
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHEEE
Confidence            47899999999999998 999999999987 799999999999999999888766555   4577788999999999999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGI  245 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~  245 (261)
                      |+|+ ..++.++.++|+.+..|..
T Consensus       143 vDDs-~~~~~~~~~ngi~i~~~~~  165 (195)
T 2hhl_A          143 VDNS-PASYIFHPENAVPVQSWFD  165 (195)
T ss_dssp             EESC-GGGGTTCGGGEEECCCCSS
T ss_pred             EECC-HHHhhhCccCccEEeeecC
Confidence            9999 8999999999998765543

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.50  E-value=7.4e-14  Score=112.10  Aligned_cols=59  Identities=10%  Similarity=0.187  Sum_probs=48.0

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      .+-+|..+++.+++.+|++++++++|||+ .||++|++.+|+++ .++++.+.+++.++++
T Consensus       180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs-~NDi~ml~~ag~~v-am~na~~~~k~~A~~v  238 (258)
T 2pq0_A          180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDG-LNDIEMLSFVGTGV-AMGNAHEEVKRVADFV  238 (258)
T ss_dssp             SSCCHHHHHHHHHHHHTCCGGGEEEECCS-GGGHHHHHHSSEEE-EETTCCHHHHHTCSEE
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCc-HHhHHHHHhCCcEE-EeCCCcHHHHHhCCEE
Confidence            44556779999999999999999999999 89999999999876 5777765555544443

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.50  E-value=1e-13  Score=113.90  Aligned_cols=99  Identities=12%  Similarity=0.098  Sum_probs=86.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHh--------cCcccccceEEecCCCCCCCCCHHHHHHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKD--------LNVIDLFDAVVISSEVGCEKPDPRIFKAALDQ  211 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~--------~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~  211 (261)
                      .++||+.++|+.|+++|++++|+||.+..    +..+++.        +|+  +|+.+++.++. ..||+|..+..++++
T Consensus       188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~~~  264 (301)
T 1ltq_A          188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIFWK  264 (301)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHHHH
Confidence            57999999999999999999999998743    3567777        888  48988887765 469999999999999


Q ss_pred             cCCCCCc-EEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          212 MSVEASR-TVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       212 l~~~~~~-~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++.++.+ +++|||+ ..|+++|+++|+.++.|..|
T Consensus       265 ~~~~~~~~~~~vgD~-~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          265 HIAPHFDVKLAIDDR-TQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HTTTTCEEEEEEECC-HHHHHHHHHTTCCEEECSCC
T ss_pred             HhccccceEEEeCCc-HHHHHHHHHcCCeEEEecCC
Confidence            9887655 6999999 89999999999999998776

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.49  E-value=4.8e-14  Score=111.15  Aligned_cols=54  Identities=11%  Similarity=-0.045  Sum_probs=45.4

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHH
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~e  252 (261)
                      .+.+++..++.+++.+|++++++++|||+ .||++|++.+|+. +.++++...+++
T Consensus       150 ~~~~K~~~l~~l~~~~~~~~~~~~~iGD~-~nD~~m~~~ag~~-va~~n~~~~~k~  203 (227)
T 1l6r_A          150 RGEDKAFAVNKLKEMYSLEYDEILVIGDS-NNDMPMFQLPVRK-ACPANATDNIKA  203 (227)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEECCS-GGGHHHHTSSSEE-EECTTSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCcCHHHEEEECCc-HHhHHHHHHcCce-EEecCchHHHHH
Confidence            44677889999999999999999999999 8999999999986 577776544433

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.47  E-value=1.4e-14  Score=118.15  Aligned_cols=60  Identities=13%  Similarity=0.221  Sum_probs=51.8

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      ...+.+++.+++.+++.+|++++++++|||+ .||++|++.+|+++ .++++.+.+++.++.
T Consensus       204 ~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~-~NDi~ml~~ag~~v-Am~Na~~~vk~~A~~  263 (285)
T 3pgv_A          204 MAGGVSKGHALEAVAKMLGYTLSDCIAFGDG-MNDAEMLSMAGKGC-IMANAHQRLKDLHPE  263 (285)
T ss_dssp             EETTCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSSEEE-ECTTSCHHHHHHCTT
T ss_pred             ecCCCChHHHHHHHHHHhCCCHHHEEEECCc-HhhHHHHHhcCCEE-EccCCCHHHHHhCCC
Confidence            3456778889999999999999999999999 89999999999655 898988877777664

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.46  E-value=4.4e-15  Score=119.55  Aligned_cols=51  Identities=12%  Similarity=0.153  Sum_probs=45.4

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      ...++|++.++..+++.+|++++++++|||+ .+|++|++.+|+.+ .++++.
T Consensus       182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~-~nD~~~~~~ag~~v-~~~n~~  232 (261)
T 2rbk_A          182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDG-GNDISMLRHAAIGV-AMGQAK  232 (261)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEEE-ECTTSC
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcCceE-EecCcc
Confidence            4578899999999999999999999999999 89999999999865 566653

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.46  E-value=3.6e-14  Score=114.53  Aligned_cols=61  Identities=16%  Similarity=0.133  Sum_probs=51.3

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ...+.+++.+++.+++++|++++++++|||+ .||++|++.+|+++ .++++.+.+++.++++
T Consensus       189 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~-~NDi~m~~~ag~~v-am~na~~~~k~~Ad~v  249 (268)
T 3r4c_A          189 NVAGTSKATGLSLFADYYRVKVSEIMACGDG-GNDIPMLKAAGIGV-AMGNASEKVQSVADFV  249 (268)
T ss_dssp             EETTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSSEEE-ECTTSCHHHHHTCSEE
T ss_pred             eeCCCCHHHHHHHHHHHcCCCHHHEEEECCc-HHhHHHHHhCCCeE-EeCCCcHHHHHhcCEe
Confidence            4456778889999999999999999999999 89999999999764 7888876666655554

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=99.38  E-value=2e-13  Score=113.99  Aligned_cols=53  Identities=21%  Similarity=0.262  Sum_probs=44.5

Q ss_pred             CCCCCCCHHHHHHHHHHc----------------------CC-----CCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          195 VGCEKPDPRIFKAALDQM----------------------SV-----EASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l----------------------~~-----~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      ...+||++.+|+.+.+.+                      |+     +++++++|||++..||.+|+++|+.+++|.++.
T Consensus       242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~  321 (352)
T 3kc2_A          242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV  321 (352)
T ss_dssp             EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred             eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence            347999999999887654                      22     679999999995579999999999999998863

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.33  E-value=2e-11  Score=96.93  Aligned_cols=97  Identities=15%  Similarity=0.097  Sum_probs=71.8

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch----H-HHHHHHhcCcccccc-eEEecCCCCCCCCCHHHHHHHHHHcCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT----R-LRKLLKDLNVIDLFD-AVVISSEVGCEKPDPRIFKAALDQMSVEA  216 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~----~-~~~~l~~~gl~~~f~-~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~  216 (261)
                      .+++||+.++++.|++.|++++++||.+.    . ....|+.+|+..+++ .++....   ..++...+..+.+. |.  
T Consensus       100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~---~~~K~~~r~~l~~~-Gy--  173 (262)
T 3ocu_A          100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD---KSAKAARFAEIEKQ-GY--  173 (262)
T ss_dssp             CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS---CSCCHHHHHHHHHT-TE--
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC---CCChHHHHHHHHhc-CC--
Confidence            48999999999999999999999998764    3 478899999976563 4544332   23455567776665 33  


Q ss_pred             CcEEEEcCCchhhhHHHH-----------------hCCCeEEEECCC
Q 024886          217 SRTVHIGDDEKADKQGAN-----------------SLGIDCWLWGID  246 (261)
Q Consensus       217 ~~~l~iGD~~~~Di~~a~-----------------~~G~~~i~v~~~  246 (261)
                      .-+++|||+ ..|+.++.                 ..|-+.|..+|+
T Consensus       174 ~iv~~vGD~-~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp  219 (262)
T 3ocu_A          174 EIVLYVGDN-LDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNA  219 (262)
T ss_dssp             EEEEEEESS-GGGGCSTTTTCCHHHHHHHHHHTGGGBTTTEEECCCS
T ss_pred             CEEEEECCC-hHHhccccccCCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence            239999999 79999733                 256677777776

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=99.33  E-value=4.5e-11  Score=103.14  Aligned_cols=99  Identities=19%  Similarity=0.170  Sum_probs=80.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhc-C-------------cccccceEEecCCCCCCCCCHHH---
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDL-N-------------VIDLFDAVVISSEVGCEKPDPRI---  204 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~-g-------------l~~~f~~i~~~~~~~~~Kp~~~~---  204 (261)
                      +...|++..+|+.|++.| +++++||++.. +..+++.+ |             |.++||.+++.    ..||..-.   
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~----A~KP~FF~~~~  319 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVD----ARKPLFFGEGT  319 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEES----CCTTGGGTTCC
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEe----CCCCCcccCCC
Confidence            345678999999999999 99999999977 67777765 5             56789987653    33444222   


Q ss_pred             -------------------------------HHHHHHHcCCCCCcEEEEcCCchhhhHHHH-hCCCeEEEECCC
Q 024886          205 -------------------------------FKAALDQMSVEASRTVHIGDDEKADKQGAN-SLGIDCWLWGID  246 (261)
Q Consensus       205 -------------------------------~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~-~~G~~~i~v~~~  246 (261)
                                                     +..+++.+|+++++++||||+.-.||-.+. .+||.+++|-.-
T Consensus       320 pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          320 VLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             CEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             cceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence                                           588999999999999999999999999997 899999988553

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.30  E-value=4.9e-11  Score=94.61  Aligned_cols=97  Identities=19%  Similarity=0.178  Sum_probs=70.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch----H-HHHHHHhcCcccccc-eEEecCCCCCCCCCHHHHHHHHHHcCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT----R-LRKLLKDLNVIDLFD-AVVISSEVGCEKPDPRIFKAALDQMSVEA  216 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~----~-~~~~l~~~gl~~~f~-~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~  216 (261)
                      .+++||+.++++.|++.|++++++||.+.    . ....|+.+|+..+++ .++...+   ...+...+..+.+ .|.  
T Consensus       100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~---~~~K~~~r~~L~~-~gy--  173 (260)
T 3pct_A          100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKD---KSNKSVRFKQVED-MGY--  173 (260)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESS---CSSSHHHHHHHHT-TTC--
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCC---CCChHHHHHHHHh-cCC--
Confidence            58999999999999999999999999763    3 478899999976664 4443332   1234445555554 343  


Q ss_pred             CcEEEEcCCchhhhHHH--------H---------hCCCeEEEECCC
Q 024886          217 SRTVHIGDDEKADKQGA--------N---------SLGIDCWLWGID  246 (261)
Q Consensus       217 ~~~l~iGD~~~~Di~~a--------~---------~~G~~~i~v~~~  246 (261)
                      .-+++|||+ ..|+.+.        +         ..|-+.|..+|+
T Consensus       174 ~iv~~iGD~-~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp  219 (260)
T 3pct_A          174 DIVLFVGDN-LNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNT  219 (260)
T ss_dssp             EEEEEEESS-GGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred             CEEEEECCC-hHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence            339999999 7999982        2         267777777777

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.27  E-value=4.2e-11  Score=97.59  Aligned_cols=57  Identities=16%  Similarity=0.208  Sum_probs=46.7

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      .+-++..+++.+++.+|++++++++|||+ .||++|++.+|+ ++.++++...+.+.++
T Consensus       213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~-~nD~~m~~~ag~-~va~~~~~~~~~~~a~  269 (288)
T 1nrw_A          213 RKASKGQALKRLAKQLNIPLEETAAVGDS-LNDKSMLEAAGK-GVAMGNAREDIKSIAD  269 (288)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEESS-GGGHHHHHHSSE-EEECTTCCHHHHHHCS
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEEcCC-HHHHHHHHHcCc-EEEEcCCCHHHHhhCc
Confidence            44567779999999999999999999999 899999999998 5678776544444333

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=99.26  E-value=1.1e-10  Score=94.09  Aligned_cols=57  Identities=12%  Similarity=0.155  Sum_probs=46.4

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      ...+.+++.++..+++.+|++++++++|||+ .+|++|++.+|+.+ .++++...+.+.
T Consensus       185 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~-~nD~~~~~~ag~~v-~~~n~~~~~~~~  241 (268)
T 1nf2_A          185 VPKNVDKGKALRFLRERMNWKKEEIVVFGDN-ENDLFMFEEAGLRV-AMENAIEKVKEA  241 (268)
T ss_dssp             ECTTCCHHHHHHHHHHHHTCCGGGEEEEECS-HHHHHHHTTCSEEE-ECTTSCHHHHHH
T ss_pred             eCCCCChHHHHHHHHHHcCCCHHHeEEEcCc-hhhHHHHHHcCCEE-EecCCCHHHHhh
Confidence            3455677889999999999999999999999 89999999999854 677664434333

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.20  E-value=1.3e-11  Score=102.68  Aligned_cols=100  Identities=15%  Similarity=0.124  Sum_probs=64.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEec----CCC----------------CCCCCC-
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVIS----SEV----------------GCEKPD-  201 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~----~~~----------------~~~Kp~-  201 (261)
                      .+.+++.++++.|++ |++++++|+.... .....+.+++.   +.++..    +..                ...++. 
T Consensus       103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~  178 (332)
T 1y8a_A          103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE  178 (332)
T ss_dssp             CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred             CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhh---hhhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence            568999999999999 9999999987644 45556666652   222211    000                000111 


Q ss_pred             --------------HHHHH------------HHHHHcCCCCCc----EEEEcCCchhhhHHHHhC----CCeEEEECCCC
Q 024886          202 --------------PRIFK------------AALDQMSVEASR----TVHIGDDEKADKQGANSL----GIDCWLWGIDV  247 (261)
Q Consensus       202 --------------~~~~~------------~~~~~l~~~~~~----~l~iGD~~~~Di~~a~~~----G~~~i~v~~~~  247 (261)
                                    +..+.            .+++  |+++++    +++|||+ .||++|++.+    |+.+ .+ ++.
T Consensus       179 ~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--gi~~~~~~~~via~GDs-~NDi~ml~~A~~~~g~~v-am-na~  253 (332)
T 1y8a_A          179 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--GYCESKGIDFPVVVGDS-ISDYKMFEAARGLGGVAI-AF-NGN  253 (332)
T ss_dssp             HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--HHHHHHTCSSCEEEECS-GGGHHHHHHHHHTTCEEE-EE-SCC
T ss_pred             HHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--ccChhhcCceEEEEeCc-HhHHHHHHHHhhcCCeEE-Ee-cCC
Confidence                          11122            1222  677888    9999999 8999999999    9875 56 664


Q ss_pred             CChHH
Q 024886          248 KTFSD  252 (261)
Q Consensus       248 ~~~~e  252 (261)
                      +.+++
T Consensus       254 ~~lk~  258 (332)
T 1y8a_A          254 EYALK  258 (332)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            43333

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.18  E-value=2.2e-11  Score=98.97  Aligned_cols=55  Identities=13%  Similarity=0.131  Sum_probs=45.5

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHH
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~e  252 (261)
                      ..+-+++.+++.+++.+|++++++++|||+ .||++|++.+|+ ++.++++...+.+
T Consensus       194 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~-~nD~~m~~~ag~-~va~~n~~~~~~~  248 (282)
T 1rkq_A          194 DKRVNKGTGVKSLADVLGIKPEEIMAIGDQ-ENDIAMIEYAGV-GVAVDNAIPSVKE  248 (282)
T ss_dssp             ETTCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSE-EEECTTSCHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCCHHHEEEECCc-HHHHHHHHHCCc-EEEecCCcHHHHh
Confidence            345667889999999999999999999999 899999999998 4578776443333

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=99.17  E-value=6.6e-10  Score=93.83  Aligned_cols=91  Identities=12%  Similarity=0.022  Sum_probs=61.7

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccc--cceEEecC------------CC-----CCCCCCHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDL--FDAVVISS------------EV-----GCEKPDPR  203 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~--f~~i~~~~------------~~-----~~~Kp~~~  203 (261)
                      .++|++.++++.|+++|++++|+|++... ++.+.+.+|+.-.  .+.+++..            ..     ..+..++.
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~  300 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQ  300 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHH
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHH
Confidence            47999999999999999999999999988 6888888875311  12333321            00     01111333


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSL  236 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~  236 (261)
                      .++.++.. ......++++||+ .+|+.|.+..
T Consensus       301 ~i~~~~~~-~~~~~~i~a~GDs-~~D~~ML~~~  331 (385)
T 4gxt_A          301 TINKLIKN-DRNYGPIMVGGDS-DGDFAMLKEF  331 (385)
T ss_dssp             HHHHHTCC-TTEECCSEEEECS-GGGHHHHHHC
T ss_pred             HHHHHHHh-cCCCCcEEEEECC-HhHHHHHhcC
Confidence            44443322 2344668999999 8999999974

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=99.14  E-value=1.1e-11  Score=93.84  Aligned_cols=96  Identities=7%  Similarity=0.048  Sum_probs=83.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      ..++||+.++|+.+++. ++++|+|++... ++.+++.++...+|+.+++.++....|   ..|...++.+|.++++|++
T Consensus        54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~vi  129 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRVLI  129 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGEEE
T ss_pred             EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceEEE
Confidence            47899999999999998 999999999987 799999999988999998887654433   3567778899999999999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEE
Q 024886          222 IGDDEKADKQGANSLGIDCWLW  243 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v  243 (261)
                      |||+ ..++.++..+|+....|
T Consensus       130 vdDs-~~~~~~~~~ngi~i~~~  150 (181)
T 2ght_A          130 LDNS-PASYVFHPDNAVPVASW  150 (181)
T ss_dssp             ECSC-GGGGTTCTTSBCCCCCC
T ss_pred             EeCC-HHHhccCcCCEeEeccc
Confidence            9999 89999999999986544

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=99.03  E-value=7.9e-10  Score=90.64  Aligned_cols=56  Identities=7%  Similarity=0.059  Sum_probs=46.4

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      ..+-+++.+++.+++.+|++++++++|||+ .||++|++.+|+. +.++++...+.+.
T Consensus       220 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~-~nD~~m~~~ag~~-va~~na~~~~k~~  275 (301)
T 2b30_A          220 KLGHDKYTGINYLLKHYNISNDQVLVVGDA-ENDIAMLSNFKYS-FAVANATDSAKSH  275 (301)
T ss_dssp             ETTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHSCSEE-EECTTCCHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcCCe-EEEcCCcHHHHhh
Confidence            345677889999999999999999999999 8999999999986 5687765444433

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.03  E-value=2.3e-10  Score=91.71  Aligned_cols=51  Identities=12%  Similarity=-0.000  Sum_probs=44.6

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCC--CcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          195 VGCEKPDPRIFKAALDQMSVEA--SRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~--~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      .+. ++|+.+++.+++.+|+++  +++++|||+ .||+.|++.+|+.+ .++++..
T Consensus       172 ~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~-~nD~~m~~~ag~~v-a~~na~~  224 (259)
T 3zx4_A          172 AKG-ADKGRAVARLRALWPDPEEARFAVGLGDS-LNDLPLFRAVDLAV-YVGRGDP  224 (259)
T ss_dssp             ESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESS-GGGHHHHHTSSEEE-ECSSSCC
T ss_pred             cCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCC-HHHHHHHHhCCCeE-EeCChhh
Confidence            444 788999999999999999  999999999 89999999999764 7777654

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=98.84  E-value=1.1e-08  Score=81.12  Aligned_cols=57  Identities=11%  Similarity=-0.001  Sum_probs=47.4

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      ...+-+++.++..+++.+|++++++++|||+ .||++|++.+|+. +.++++...+.+.
T Consensus       157 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~-~nD~~m~~~~g~~-va~~na~~~~k~~  213 (244)
T 1s2o_A          157 LPQRSNKGNATQYLQQHLAMEPSQTLVCGDS-GNDIGLFETSARG-VIVRNAQPELLHW  213 (244)
T ss_dssp             EETTCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHTSSSEE-EECTTCCHHHHHH
T ss_pred             ccCCCChHHHHHHHHHHhCCCHHHEEEECCc-hhhHHHHhccCcE-EEEcCCcHHHHHH
Confidence            3455677889999999999999999999999 8999999999985 5787765555554

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=98.83  E-value=1.6e-08  Score=82.64  Aligned_cols=94  Identities=19%  Similarity=0.140  Sum_probs=64.5

Q ss_pred             ceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecC----C------------CCCCCCCHHH
Q 024886          142 AWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISS----E------------VGCEKPDPRI  204 (261)
Q Consensus       142 ~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~----~------------~~~~Kp~~~~  204 (261)
                      ..++.||+.++++.|++.|++++++|++... ++.+.+.+|+......+++..    +            ....|+.+..
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~  218 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  218 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence            4689999999999999999999999998877 799999999754332333221    0            0112222222


Q ss_pred             HHHHHHHcCCCCCcEEEEcCCchhhhHHHHhC
Q 024886          205 FKAALDQMSVEASRTVHIGDDEKADKQGANSL  236 (261)
Q Consensus       205 ~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~  236 (261)
                      -......+.-...+++++||+ .||+.|+..+
T Consensus       219 k~~~~~~~~~~~~~v~~vGDG-iNDa~m~k~l  249 (297)
T 4fe3_A          219 KNTDYFSQLKDNSNIILLGDS-QGDLRMADGV  249 (297)
T ss_dssp             TCHHHHHHTTTCCEEEEEESS-GGGGGTTTTC
T ss_pred             HHHHHHHhhccCCEEEEEeCc-HHHHHHHhCc
Confidence            122233344456789999999 8999997643

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=98.77  E-value=1.4e-08  Score=80.76  Aligned_cols=58  Identities=17%  Similarity=0.107  Sum_probs=47.8

Q ss_pred             CCCCHHHHHHHHHHcCC-CCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC-CChHHHHHhh
Q 024886          198 EKPDPRIFKAALDQMSV-EASRTVHIGDDEKADKQGANSLGIDCWLWGIDV-KTFSDVQNRI  257 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~-~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~-~~~~el~~~l  257 (261)
                      +-.|..+++.+++.+|+ +++++++|||+ .||++|.+.+|++ +.++++. ..+++.++++
T Consensus       177 g~sKg~al~~l~~~~~~~~~~~viafGD~-~NDi~Ml~~ag~~-va~gna~~~~~~~~a~~v  236 (249)
T 2zos_A          177 NSDKGKAAKILLDFYKRLGQIESYAVGDS-YNDFPMFEVVDKV-FIVGSLKHKKAQNVSSII  236 (249)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECS-GGGHHHHTTSSEE-EEESSCCCTTEEEESSHH
T ss_pred             CCChHHHHHHHHHHhccCCCceEEEECCC-cccHHHHHhCCcE-EEeCCCCccccchhceEE
Confidence            55677799999999998 99999999999 8999999999986 6888876 4455544443

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=98.72  E-value=1.5e-08  Score=81.97  Aligned_cols=56  Identities=9%  Similarity=0.027  Sum_probs=44.7

Q ss_pred             CCCCCCHHHHHHHHHHcC-CCCCc--EEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHH
Q 024886          196 GCEKPDPRIFKAALDQMS-VEASR--TVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDV  253 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~-~~~~~--~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el  253 (261)
                      ..+-++..+++.+++.+| +++++  +++|||+ .||+.|++.+|++ +.++++.....++
T Consensus       185 ~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~-~nD~~m~~~ag~~-va~~n~~~~~~~~  243 (275)
T 1xvi_A          185 DASAGKDQAANWIIATYQQLSGKRPTTLGLGDG-PNDAPLLEVMDYA-VIVKGLNREGVHL  243 (275)
T ss_dssp             ETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESS-GGGHHHHHTSSEE-EECCCCC------
T ss_pred             cCCCCHHHHHHHHHHHhhhcccccCcEEEECCC-hhhHHHHHhCCce-EEecCCCccchhh
Confidence            345677889999999999 99999  9999999 8999999999985 7888887444444

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=98.69  E-value=6.4e-07  Score=73.83  Aligned_cols=36  Identities=22%  Similarity=0.286  Sum_probs=32.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKD  179 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~  179 (261)
                      .++|++.++++.|+++|++++|+|++... ++.+.+.
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~  179 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAAD  179 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhh
Confidence            58999999999999999999999999988 5777765

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=98.69  E-value=3.4e-09  Score=81.18  Aligned_cols=97  Identities=13%  Similarity=0.095  Sum_probs=74.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc-cccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI-DLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV  220 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  220 (261)
                      ....||+.++|+.++ +++.++|.|++... +..+++.++.. .+|+..+..+..... +  ..|..-++.+|.++++|+
T Consensus        58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~-~--g~y~KdL~~Lgrdl~~vI  133 (204)
T 3qle_A           58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYK-D--GVHIKDLSKLNRDLSKVI  133 (204)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEE-T--TEEECCGGGSCSCGGGEE
T ss_pred             EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEE-C--CeeeecHHHhCCChHHEE
Confidence            478999999999998 56999999998887 89999999876 478877665543221 1  124456778899999999


Q ss_pred             EEcCCchhhhHHHHhCCCeEEEEC
Q 024886          221 HIGDDEKADKQGANSLGIDCWLWG  244 (261)
Q Consensus       221 ~iGD~~~~Di~~a~~~G~~~i~v~  244 (261)
                      +|.|+ ...+......|+....+.
T Consensus       134 iIDDs-p~~~~~~p~N~I~I~~~~  156 (204)
T 3qle_A          134 IIDTD-PNSYKLQPENAIPMEPWN  156 (204)
T ss_dssp             EEESC-TTTTTTCGGGEEECCCCC
T ss_pred             EEECC-HHHHhhCccCceEeeeEC
Confidence            99887 677777667777665443

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.65  E-value=2e-06  Score=73.59  Aligned_cols=100  Identities=18%  Similarity=0.143  Sum_probs=76.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh-c--------CcccccceEEecCCCCCCCCC-----------
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKD-L--------NVIDLFDAVVISSEVGCEKPD-----------  201 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~-~--------gl~~~f~~i~~~~~~~~~Kp~-----------  201 (261)
                      +...|.+..+|+.|+++|.+++++||++-+ ....+.. +        .|.++||.||+.-    .||.           
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A----~KP~FF~~~~~~~~v  260 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLA----NKPRFFYDNLRFLSV  260 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESC----CTTHHHHSCCCEEEE
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECC----CCCCcccCCCcceEE
Confidence            344688899999999999999999999876 5544443 2        4778999998742    2221           


Q ss_pred             --------------------HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHh-CCCeEEEECCC
Q 024886          202 --------------------PRIFKAALDQMSVEASRTVHIGDDEKADKQGANS-LGIDCWLWGID  246 (261)
Q Consensus       202 --------------------~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~-~G~~~i~v~~~  246 (261)
                                          ......+.+.+|....+++||||+...||-.++. .||.+++|-..
T Consensus       261 ~~~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  326 (470)
T 4g63_A          261 NPENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  326 (470)
T ss_dssp             CTTTCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred             ECCCCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence                                1125677888899999999999999999877765 59999988553

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=98.36  E-value=3.1e-07  Score=76.81  Aligned_cols=76  Identities=16%  Similarity=0.220  Sum_probs=59.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc-ccc-eEEecCCCCCCCCCHHHHHHHHHHc-CCCCCc
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID-LFD-AVVISSEVGCEKPDPRIFKAALDQM-SVEASR  218 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~-~f~-~i~~~~~~~~~Kp~~~~~~~~~~~l-~~~~~~  218 (261)
                      +...||+.++|+.++ +++.++|+|++... +..+++.++... +|. .+++.++.+.      .|..-++.+ |.++++
T Consensus        74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~------~~~KdL~~L~~~dl~~  146 (372)
T 3ef0_A           74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCDTSM  146 (372)
T ss_dssp             EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC------SSCCCGGGTCSSCCTT
T ss_pred             EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC------cceecHHHhcCCCCce
Confidence            578999999999998 56999999999887 799999998776 787 5665555432      122235554 999999


Q ss_pred             EEEEcCC
Q 024886          219 TVHIGDD  225 (261)
Q Consensus       219 ~l~iGD~  225 (261)
                      +++|.|+
T Consensus       147 viiiDd~  153 (372)
T 3ef0_A          147 VVVIDDR  153 (372)
T ss_dssp             EEEEESC
T ss_pred             EEEEeCC
Confidence            9999776

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.32  E-value=6.5e-07  Score=80.64  Aligned_cols=91  Identities=18%  Similarity=0.234  Sum_probs=69.6

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ++.|++.+.++.|++.|++++++|+.+.. ...+.+.+|++.++..+     .  +..+....+.+    .-. +++++|
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~-----~--P~~K~~~v~~l----~~~-~~v~~v  524 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV-----L--PHQKSEEVKKL----QAK-EVVAFV  524 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSC-----C--TTCHHHHHHHH----TTT-CCEEEE
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeC-----C--HHhHHHHHHHH----hhC-CeEEEE
Confidence            46799999999999999999999998877 78999999986443222     1  23344444444    333 889999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      ||. .||+.+.+.+|++. .++++.+
T Consensus       525 GDg-~ND~~al~~A~vgi-amg~g~~  548 (645)
T 3j08_A          525 GDG-INDAPALAQADLGI-AVGSGSD  548 (645)
T ss_dssp             ECS-SSCHHHHHHSSEEE-EECCCSC
T ss_pred             eCC-HhHHHHHHhCCEEE-EeCCCcH
Confidence            999 89999999999665 6767643

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.24  E-value=1.7e-06  Score=62.22  Aligned_cols=40  Identities=10%  Similarity=-0.014  Sum_probs=31.8

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcCcc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLNVI  183 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~gl~  183 (261)
                      .+.|++.++|+.|+++|+.++++|+.+..    +..+++.+|+.
T Consensus        24 ~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~   67 (142)
T 2obb_A           24 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE   67 (142)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence            34578999999999999999999998632    46667777774

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=98.14  E-value=2.9e-06  Score=77.29  Aligned_cols=101  Identities=12%  Similarity=0.179  Sum_probs=75.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ++.|++.+.++.|++.|++++++|+.... ...+.+.+|++.++..+           .|+--..+++.+.-..+.+++|
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~-----------~P~~K~~~v~~l~~~g~~V~~v  622 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEI-----------MPEDKSRIVSELKDKGLIVAMA  622 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECSC-----------CHHHHHHHHHHHHHHSCCEEEE
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEec-----------CHHHHHHHHHHHHhcCCEEEEE
Confidence            45789999999999999999999998877 78999999986433211           2333344444444456789999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ||. .||+.+.+.+|++. .++++.+...+.++++
T Consensus       623 GDG-~ND~paL~~AdvGI-Amg~g~d~a~~~AD~v  655 (736)
T 3rfu_A          623 GDG-VNDAPALAKADIGI-AMGTGTDVAIESAGVT  655 (736)
T ss_dssp             ECS-STTHHHHHHSSEEE-EESSSCSHHHHHCSEE
T ss_pred             ECC-hHhHHHHHhCCEEE-EeCCccHHHHHhCCEE
Confidence            999 89999999999765 7778866555555544

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.14  E-value=2.4e-06  Score=78.00  Aligned_cols=92  Identities=17%  Similarity=0.231  Sum_probs=69.3

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ++.|++.+.++.|++.|++++++|+.... ...+.+.+|++..+..+     .  +..|....+.+    .-. +++++|
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~-----~--P~~K~~~v~~l----~~~-~~v~~v  602 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV-----L--PHQKSEEVKKL----QAK-EVVAFV  602 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSC-----C--TTCHHHHHHHH----TTT-CCEEEE
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccC-----C--HHHHHHHHHHH----hcC-CeEEEE
Confidence            46799999999999999999999998877 78899999986433222     1  23344444444    333 789999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCCC
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVKT  249 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~~  249 (261)
                      ||. .||+.+.+.+|++. .++++.+.
T Consensus       603 GDg-~ND~~al~~A~vgi-amg~g~~~  627 (723)
T 3j09_A          603 GDG-INDAPALAQADLGI-AVGSGSDV  627 (723)
T ss_dssp             ECS-STTHHHHHHSSEEE-ECCCCSCC
T ss_pred             ECC-hhhHHHHhhCCEEE-EeCCCcHH
Confidence            999 89999999999765 66666443

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=98.01  E-value=1e-05  Score=64.00  Aligned_cols=43  Identities=14%  Similarity=0.006  Sum_probs=33.5

Q ss_pred             CCCcEEEEcCC---chhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          215 EASRTVHIGDD---EKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       215 ~~~~~l~iGD~---~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +++++++|||+   -.||++|.+.+|.-.+.|+++.+.++.+.+++
T Consensus       198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~~  243 (246)
T 3f9r_A          198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKII  243 (246)
T ss_dssp             TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHHH
T ss_pred             CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHHh
Confidence            57899999994   26999999999877778877666666665554

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=97.96  E-value=5.4e-06  Score=78.38  Aligned_cols=99  Identities=15%  Similarity=0.176  Sum_probs=68.8

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccc----eEEecCCCC------------------CCCC
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFD----AVVISSEVG------------------CEKP  200 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~----~i~~~~~~~------------------~~Kp  200 (261)
                      ++.|++.++++.|++.|++++++|+.... ...+.+.+|+....+    .++..++..                  ...|
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P  682 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP  682 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCS
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCH
Confidence            46799999999999999999999998877 788899999864321    122221110                  0112


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      .  -...+++.+.-..+.+.++||. .||+.+.+.|+++. .++++
T Consensus       683 ~--~K~~~v~~l~~~g~~v~~~GDG-~ND~~alk~Advgi-amg~g  724 (995)
T 3ar4_A          683 S--HKSKIVEYLQSYDEITAMTGDG-VNDAPALKKAEIGI-AMGSG  724 (995)
T ss_dssp             S--HHHHHHHHHHTTTCCEEEEECS-GGGHHHHHHSTEEE-EETTS
T ss_pred             H--HHHHHHHHHHHCCCEEEEEcCC-chhHHHHHHCCeEE-EeCCC
Confidence            2  2233333333335789999999 89999999999876 46665

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=97.85  E-value=4.4e-06  Score=68.44  Aligned_cols=98  Identities=9%  Similarity=0.032  Sum_probs=64.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc--ceEEecCC---CC-CCCCCHHHHHHHHHHc----
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF--DAVVISSE---VG-CEKPDPRIFKAALDQM----  212 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f--~~i~~~~~---~~-~~Kp~~~~~~~~~~~l----  212 (261)
                      ...||+.++|+.+.+. |.++|.|++... +..+++.++....+  ...+..+.   .. ..+..+..|-.-++.+    
T Consensus       164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~  242 (320)
T 3shq_A          164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALY  242 (320)
T ss_dssp             HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHC
T ss_pred             EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhccc
Confidence            5679999999999965 999999998877 89999998765442  21111111   00 0001111122224444    


Q ss_pred             -CCCCCcEEEEcCCchhhhHHHHhCCCeEEEE
Q 024886          213 -SVEASRTVHIGDDEKADKQGANSLGIDCWLW  243 (261)
Q Consensus       213 -~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v  243 (261)
                       |.+++++++|.|+ +.-.......|+....+
T Consensus       243 p~rdl~~tIiIDds-p~~~~~~p~NgI~I~~~  273 (320)
T 3shq_A          243 KQYNSSNTIMFDDI-RRNFLMNPKSGLKIRPF  273 (320)
T ss_dssp             TTCCGGGEEEEESC-GGGGTTSGGGEEECCCC
T ss_pred             CCCChhHEEEEeCC-hHHhccCcCceEEeCeE
Confidence             7889999999887 67777777777766544

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.84  E-value=2.6e-05  Score=54.98  Aligned_cols=28  Identities=4%  Similarity=0.065  Sum_probs=24.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCch
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDT  171 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~  171 (261)
                      .+.++..++++.|+++|++++++|+.+.
T Consensus        24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~   51 (126)
T 1xpj_A           24 LPRLDVIEQLREYHQLGFEIVISTARNM   51 (126)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence            4567788999999999999999999764

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=97.64  E-value=7e-05  Score=71.00  Aligned_cols=110  Identities=15%  Similarity=0.151  Sum_probs=71.6

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc------------------------ceEEecCCC---
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF------------------------DAVVISSEV---  195 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f------------------------~~i~~~~~~---  195 (261)
                      ++.|++.++++.|++.|++++++|+.... ...+.+.+|+...-                        ..++...+.   
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~  678 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL  678 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence            45799999999999999999999998776 68888888875210                        111111100   


Q ss_pred             ---------------CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC-CCCCChHHHHH
Q 024886          196 ---------------GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG-IDVKTFSDVQN  255 (261)
Q Consensus       196 ---------------~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~-~~~~~~~el~~  255 (261)
                                     -.....|+-...+.+.+.-..+.+.++||. .||+.|.+.|+++. .++ ++.+...+.++
T Consensus       679 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG-~ND~paLk~AdvGI-Amg~~gtd~ak~aAD  752 (1028)
T 2zxe_A          679 STEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDG-VNDSPALKKADIGV-AMGISGSDVSKQAAD  752 (1028)
T ss_dssp             CHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECS-GGGHHHHHHSSEEE-EESSSCCHHHHHHCS
T ss_pred             CHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCC-cchHHHHHhCCceE-EeCCccCHHHHHhcC
Confidence                           111223333333333332234679999998 89999999999877 566 46443344333

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=97.55  E-value=7.7e-05  Score=70.80  Aligned_cols=112  Identities=13%  Similarity=0.149  Sum_probs=73.7

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc------------------------ceEEecCCC---
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF------------------------DAVVISSEV---  195 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f------------------------~~i~~~~~~---  195 (261)
                      ++.|++.++++.|++.|++++++|+.... +..+.+.+|+...-                        ..++.....   
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~  683 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM  683 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence            46789999999999999999999998876 78888888874210                        001111000   


Q ss_pred             ---------------CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEEC-CCCCChHHHHHhh
Q 024886          196 ---------------GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWG-IDVKTFSDVQNRI  257 (261)
Q Consensus       196 ---------------~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~-~~~~~~~el~~~l  257 (261)
                                     -...-.|+-...+.+.+.-....++++||. .||+.|.+.||++. .++ ++.+..++.++++
T Consensus       684 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG-~ND~~mLk~A~vGI-AMg~ng~d~aK~aAD~V  759 (1034)
T 3ixz_A          684 DPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDG-VNDSPALKKADIGV-AMGIAGSDAAKNAADMI  759 (1034)
T ss_pred             CHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCc-HHhHHHHHHCCeeE-EeCCccCHHHHHhcCEE
Confidence                           011112222233333333334669999999 89999999999876 566 7766666666655

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=97.25  E-value=0.00028  Score=65.79  Aligned_cols=97  Identities=9%  Similarity=0.060  Sum_probs=67.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc-c--e-E--------------------EecCCCCCC
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF-D--A-V--------------------VISSEVGCE  198 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f-~--~-i--------------------~~~~~~~~~  198 (261)
                      ++.|++.++++.|++.|+++.++|+.... ...+-+.+|+.... +  . +                    +.+..  .+
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv--~P  612 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEV--FP  612 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESC--CS
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEe--CH
Confidence            46799999999999999999999997777 78899999985311 0  0 0                    01111  11


Q ss_pred             CCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       199 Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      ..|....+.+.+ .   .+.+.++||. .||+.+.+.|+++. .++++.+
T Consensus       613 ~~K~~iV~~Lq~-~---g~~Vam~GDG-vNDapaLk~AdvGI-Amg~gtd  656 (920)
T 1mhs_A          613 QHKYNVVEILQQ-R---GYLVAMTGDG-VNDAPSLKKADTGI-AVEGSSD  656 (920)
T ss_dssp             THHHHHHHHHHT-T---TCCCEECCCC-GGGHHHHHHSSEEE-EETTSCH
T ss_pred             HHHHHHHHHHHh-C---CCeEEEEcCC-cccHHHHHhCCcCc-ccccccH
Confidence            223333444333 2   3789999998 89999999999776 5666633

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=97.24  E-value=0.00018  Score=57.26  Aligned_cols=58  Identities=5%  Similarity=-0.167  Sum_probs=49.1

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcC----CchhhhHHHHhCCCeEEEECCCCCChHHHHHhhh
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGD----DEKADKQGANSLGIDCWLWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD----~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~  258 (261)
                      .+-.|..+++.+   +|++++++++|||    + .||++|.+.+|...+.|+++.+.+++.++++.
T Consensus       194 ~~vsKg~al~~l---~gi~~~~viafGDs~~~~-~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~  255 (262)
T 2fue_A          194 EGWDKRYCLDSL---DQDSFDTIHFFGNETSPG-GNDFEIFADPRTVGHSVVSPQDTVQRCREIFF  255 (262)
T ss_dssp             TTCSTTHHHHHH---TTSCCSEEEEEESCCSTT-STTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHH---HCCCHHHEEEECCCCCCC-CCCHHHHhcCccCcEEecCCCHHHHHhhheeC
Confidence            344556688888   9999999999999    8 89999999999877788888888888888774

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=97.03  E-value=0.00054  Score=53.75  Aligned_cols=39  Identities=13%  Similarity=0.193  Sum_probs=29.6

Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhC--CCeEEEECCC
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSL--GIDCWLWGID  246 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~--G~~~i~v~~~  246 (261)
                      |..+++.+++.+|     +++|||+ .||++|.+.+  |.+. .++++
T Consensus       161 Kg~al~~l~~~~g-----via~GD~-~ND~~Ml~~a~~g~~v-am~Na  201 (239)
T 1u02_A          161 KGSAIRSVRGERP-----AIIAGDD-ATDEAAFEANDDALTI-KVGEG  201 (239)
T ss_dssp             HHHHHHHHHTTSC-----EEEEESS-HHHHHHHHTTTTSEEE-EESSS
T ss_pred             HHHHHHHHHhhCC-----eEEEeCC-CccHHHHHHhhCCcEE-EECCC
Confidence            3344555555555     9999999 8999999999  9655 77776

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=97.00  E-value=8.8e-05  Score=58.49  Aligned_cols=56  Identities=7%  Similarity=-0.126  Sum_probs=45.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcC----CchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          198 EKPDPRIFKAALDQMSVEASRTVHIGD----DEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~~~~l~iGD----~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +-.|..+++.+   +|++++++++|||    + .||++|.+.+|.-.+.|+++.+.+++++++|
T Consensus       186 ~~~Kg~al~~l---~~i~~~~viafGD~~~~~-~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v  245 (246)
T 2amy_A          186 GWDKRYCLRHV---ENDGYKTIYFFGDKTMPG-GNDHEIFTDPRTMGYSVTAPEDTRRICELLF  245 (246)
T ss_dssp             TCSGGGGGGGT---TTSCCSEEEEEECSCC----CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred             CCchHHHHHHH---hCCCHHHEEEECCCCCCC-CCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence            34455577777   8999999999999    9 8999999999987789999888888888876

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=96.97  E-value=0.00016  Score=67.27  Aligned_cols=101  Identities=12%  Similarity=0.088  Sum_probs=65.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccc-c-ceEEecCCC-----------------CCCCCCHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDL-F-DAVVISSEV-----------------GCEKPDPR  203 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~-f-~~i~~~~~~-----------------~~~Kp~~~  203 (261)
                      ++.|++.+.++.|++.|+++.++|+.... ...+-+.+|+... + +..+...+.                 ....-.|+
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~  567 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPE  567 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHH
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHH
Confidence            45789999999999999999999997776 6888899998421 0 001100000                 01111222


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      --..+++.+.-..+.+.++||. .||+.+.+.++++. .++++
T Consensus       568 ~K~~iV~~lq~~g~~Vam~GDG-vNDapaLk~AdvGI-Amg~g  608 (885)
T 3b8c_A          568 HKYEIVKKLQERKHIVGMTGDG-VNDAPALKKADIGI-AVADA  608 (885)
T ss_dssp             HHHHHHHHHHHTTCCCCBCCCS-STTHHHHHHSSSCC-CCSSS
T ss_pred             HHHHHHHHHHHCCCeEEEEcCC-chhHHHHHhCCEeE-EeCCc
Confidence            2222222222223679999998 89999999999876 45555

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.79  E-value=0.00056  Score=53.78  Aligned_cols=32  Identities=19%  Similarity=0.254  Sum_probs=22.6

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHH
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARK   78 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~   78 (261)
                      .|++|+|+||+||||++.+..+.....+++++
T Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~   34 (246)
T 2amy_A            3 APGPALCLFDVDGTLTAPRQKITKEMDDFLQK   34 (246)
T ss_dssp             -CCSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred             CCCceEEEEECCCCcCCCCcccCHHHHHHHHH
Confidence            45789999999999999776554444444443

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.45  E-value=0.0012  Score=52.43  Aligned_cols=32  Identities=25%  Similarity=0.354  Sum_probs=21.5

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHH
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARK   78 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~   78 (261)
                      +.++|+|+||+||||++....+.....+++++
T Consensus        10 ~~~~kli~~DlDGTLl~~~~~is~~~~~al~~   41 (262)
T 2fue_A           10 RKERVLCLFDVDGTLTPARQKIDPEVAAFLQK   41 (262)
T ss_dssp             ---CEEEEEESBTTTBSTTSCCCHHHHHHHHH
T ss_pred             ccCeEEEEEeCccCCCCCCCcCCHHHHHHHHH
Confidence            44689999999999999776554444444444

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=96.01  E-value=0.027  Score=46.69  Aligned_cols=84  Identities=15%  Similarity=0.133  Sum_probs=61.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCc----hHHHHHHH-hcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFD----TRLRKLLK-DLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASR  218 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~----~~~~~~l~-~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~  218 (261)
                      .++||+.++++.|++.|+++.++||+.    ......+. .+|+....+.++++...-..         +++    ....
T Consensus        29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~---------~~~----~~~~   95 (352)
T 3kc2_A           29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKS---------LVN----KYSR   95 (352)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGG---------GTT----TCSE
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHH---------HHh----cCCE
Confidence            778999999999999999999999975    22344555 68987777888876542110         111    2367


Q ss_pred             EEEEcCCchhhhHHHHhCCCeEEE
Q 024886          219 TVHIGDDEKADKQGANSLGIDCWL  242 (261)
Q Consensus       219 ~l~iGD~~~~Di~~a~~~G~~~i~  242 (261)
                      ++++|-.  .-.+.++.+|+..+.
T Consensus        96 v~viG~~--~l~~~l~~~G~~~v~  117 (352)
T 3kc2_A           96 ILAVGTP--SVRGVAEGYGFQDVV  117 (352)
T ss_dssp             EEEESST--THHHHHHHHTCSEEE
T ss_pred             EEEECCH--HHHHHHHhCCCeEec
Confidence            8888874  667788899998874

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=95.92  E-value=0.026  Score=47.94  Aligned_cols=76  Identities=16%  Similarity=0.204  Sum_probs=56.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc-ccce-EEecCCCCCCCCCHHHHHHHHHH-cCCCCCc
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID-LFDA-VVISSEVGCEKPDPRIFKAALDQ-MSVEASR  218 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~-~f~~-i~~~~~~~~~Kp~~~~~~~~~~~-l~~~~~~  218 (261)
                      +...||+.++|+.+++ .|.++|+|++... +..+++.++... +|.. +++.+..+..      |..=++. +|.+++.
T Consensus        82 V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~------~~KdL~~ll~rdl~~  154 (442)
T 3ef1_A           82 IKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL------AQKSLRRLFPCDTSM  154 (442)
T ss_dssp             EEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSCS------SCCCGGGTCSSCCTT
T ss_pred             EEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCCc------eeeehHHhcCCCcce
Confidence            5789999999999984 5999999999887 799999998765 6765 5555544321      1111443 4889999


Q ss_pred             EEEEcCC
Q 024886          219 TVHIGDD  225 (261)
Q Consensus       219 ~l~iGD~  225 (261)
                      +++|.|+
T Consensus       155 vvIIDd~  161 (442)
T 3ef1_A          155 VVVIDDR  161 (442)
T ss_dssp             EEEEESC
T ss_pred             EEEEECC
Confidence            9999665

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=95.91  E-value=0.1  Score=40.44  Aligned_cols=81  Identities=15%  Similarity=0.246  Sum_probs=59.4

Q ss_pred             CCeEEEEeCCc-hHHHHHHHhcCccccc--ceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhC
Q 024886          160 GVKVAVVSNFD-TRLRKLLKDLNVIDLF--DAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSL  236 (261)
Q Consensus       160 g~~i~i~T~~~-~~~~~~l~~~gl~~~f--~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~  236 (261)
                      ++.-++||+.. ...-..+--+|+..+|  +.|+++..+|    +...|+.+.+++|- .-.-++|||. ...-++|+..
T Consensus       176 ~~vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~kiG----KesCFerI~~RFG~-k~~yvvIGDG-~eEe~AAk~~  249 (274)
T 3geb_A          176 NCVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKTG----KESCFERIMQRFGR-KAVYVVIGDG-VEEEQGAKKH  249 (274)
T ss_dssp             TEEEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTTC----HHHHHHHHHHHHCT-TSEEEEEESS-HHHHHHHHHT
T ss_pred             ceeEEEEecCchHHHHHHHHHhhcccceecccccchhhcC----HHHHHHHHHHHhCC-CceEEEECCC-HHHHHHHHHc
Confidence            45566677655 3333344445666666  6888887654    56699999999985 4678899998 7888999999


Q ss_pred             CCeEEEECCC
Q 024886          237 GIDCWLWGID  246 (261)
Q Consensus       237 G~~~i~v~~~  246 (261)
                      +|+.+-+++.
T Consensus       250 n~PFwrI~~h  259 (274)
T 3geb_A          250 NMPFWRISCH  259 (274)
T ss_dssp             TCCEEECCSH
T ss_pred             CCCeEEeecC
Confidence            9999877553

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=95.89  E-value=0.0039  Score=49.91  Aligned_cols=49  Identities=22%  Similarity=0.222  Sum_probs=39.8

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCC---chH-HHHHHHhcCcc-cccceEEec
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNF---DTR-LRKLLKDLNVI-DLFDAVVIS  192 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~---~~~-~~~~l~~~gl~-~~f~~i~~~  192 (261)
                      .++|++.++++.|++.|++++++||.   ... +...++.+|+. ..++.++++
T Consensus        30 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~~   83 (284)
T 2hx1_A           30 GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISS   83 (284)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEEH
T ss_pred             eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEcH
Confidence            56799999999999999999999983   333 57788889987 667777665

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=95.34  E-value=0.017  Score=45.09  Aligned_cols=14  Identities=36%  Similarity=0.608  Sum_probs=12.3

Q ss_pred             ccEEEEccCCcccc
Q 024886           50 YDAVLLDAGGTLLQ   63 (261)
Q Consensus        50 ~k~iifD~DGTL~d   63 (261)
                      +++|+||+||||++
T Consensus         1 ikli~~DlDGTLl~   14 (239)
T 1u02_A            1 MSLIFLDYDGTLVP   14 (239)
T ss_dssp             -CEEEEECBTTTBC
T ss_pred             CeEEEEecCCCCcC
Confidence            47899999999997

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=94.87  E-value=0.12  Score=40.57  Aligned_cols=84  Identities=18%  Similarity=0.241  Sum_probs=56.6

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .++|++.++++.|+++|+++.++||....    ....++.+|+....+.++++..         .....+++.. ...++
T Consensus        17 ~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~---------~~~~~l~~~~-~~~~v   86 (263)
T 1zjj_A           17 RAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGL---------ATRLYMSKHL-DPGKI   86 (263)
T ss_dssp             EECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHH---------HHHHHHHHHS-CCCCE
T ss_pred             EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHH---------HHHHHHHHhC-CCCEE
Confidence            45689999999999999999999987642    3445556787655667766432         2333333332 23678


Q ss_pred             EEEcCCchhhhHHHHhCCCe
Q 024886          220 VHIGDDEKADKQGANSLGID  239 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~  239 (261)
                      .++|+.  ...+.++..|+.
T Consensus        87 ~viG~~--~l~~~l~~~G~~  104 (263)
T 1zjj_A           87 FVIGGE--GLVKEMQALGWG  104 (263)
T ss_dssp             EEESCH--HHHHHHHHHTSC
T ss_pred             EEEcCH--HHHHHHHHcCCe
Confidence            888874  566677777763

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=94.74  E-value=0.0046  Score=48.63  Aligned_cols=35  Identities=17%  Similarity=0.167  Sum_probs=24.8

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHH---HhCCC
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIAR---KYGLN   82 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~---~~g~~   82 (261)
                      |++|+|+||+||||++....+.....++++   +.|+.
T Consensus         2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~   39 (246)
T 3f9r_A            2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFC   39 (246)
T ss_dssp             CCSEEEEECSBTTTBSTTSCCCHHHHHHHHHHHHTTCE
T ss_pred             CCceEEEEeCcCCcCCCCCccCHHHHHHHHHHHHCCCE
Confidence            468999999999999987665554444443   34554

>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1

Probab=91.67  E-value=2.5  Score=33.03  Aligned_cols=97  Identities=21%  Similarity=0.271  Sum_probs=66.2

Q ss_pred             eeCccHHHHH---HHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEe-cCCCCC--CCCCHHHHHHHHHHcCCCCC
Q 024886          144 HLPHGAYQSI---LLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVI-SSEVGC--EKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       144 ~~~~g~~~~l---~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~-~~~~~~--~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      .++|+..+++   +.|.+.|+++..+++.+...-+.+..+|-.    .+.- ...+|.  +-.+++.++.+.+..+++  
T Consensus       116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~----aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP--  189 (265)
T 1wv2_A          116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCI----AVMPLAGLIGSGLGICNPYNLRIILEEAKVP--  189 (265)
T ss_dssp             TCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCS----EEEECSSSTTCCCCCSCHHHHHHHHHHCSSC--
T ss_pred             ccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCC----EEEeCCccCCCCCCcCCHHHHHHHHhcCCCC--
Confidence            4567777665   555556999997777677666777777743    2222 122232  335788999998876664  


Q ss_pred             cEEEEc---CCchhhhHHHHhCCCeEEEECCCCCC
Q 024886          218 RTVHIG---DDEKADKQGANSLGIDCWLWGIDVKT  249 (261)
Q Consensus       218 ~~l~iG---D~~~~Di~~a~~~G~~~i~v~~~~~~  249 (261)
                        ++++   .+ +.|+..|-+.|+..++|+++...
T Consensus       190 --VI~eGGI~T-PsDAa~AmeLGAdgVlVgSAI~~  221 (265)
T 1wv2_A          190 --VLVDAGVGT-ASDAAIAMELGCEAVLMNTAIAH  221 (265)
T ss_dssp             --BEEESCCCS-HHHHHHHHHHTCSEEEESHHHHT
T ss_pred             --EEEeCCCCC-HHHHHHHHHcCCCEEEEChHHhC
Confidence              3343   44 79999999999999999887543

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=88.65  E-value=1.2  Score=33.33  Aligned_cols=91  Identities=11%  Similarity=0.114  Sum_probs=55.8

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCc--hHHHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC
Q 024886          148 GAYQSILLLKDAGVKVAVVSNFD--TRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDD  225 (261)
Q Consensus       148 g~~~~l~~L~~~g~~i~i~T~~~--~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~  225 (261)
                      ++.+.|...++.+-++++++...  ..+..+-+.+|++  +.........     .....-.-++.-|++    ++|||.
T Consensus        82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~--i~~~~~~~~~-----e~~~~i~~l~~~G~~----vvVG~~  150 (196)
T 2q5c_A           82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVK--IKEFLFSSED-----EITTLISKVKTENIK----IVVSGK  150 (196)
T ss_dssp             HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCE--EEEEEECSGG-----GHHHHHHHHHHTTCC----EEEECH
T ss_pred             HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCc--eEEEEeCCHH-----HHHHHHHHHHHCCCe----EEECCH
Confidence            45566666677778999998644  3366666777764  3322221110     111222233334665    689996


Q ss_pred             chhhhHHHHhCCCeEEEECCCCCChH
Q 024886          226 EKADKQGANSLGIDCWLWGIDVKTFS  251 (261)
Q Consensus       226 ~~~Di~~a~~~G~~~i~v~~~~~~~~  251 (261)
                        .-.+.|++.|++++++.++..++.
T Consensus       151 --~~~~~A~~~Gl~~vli~sg~eSI~  174 (196)
T 2q5c_A          151 --TVTDEAIKQGLYGETINSGEESLR  174 (196)
T ss_dssp             --HHHHHHHHTTCEEEECCCCHHHHH
T ss_pred             --HHHHHHHHcCCcEEEEecCHHHHH
Confidence              557899999999999988754443

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=87.68  E-value=1.2  Score=35.70  Aligned_cols=48  Identities=21%  Similarity=0.066  Sum_probs=36.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCc---hH-HHHHHHhcCcc-cccceEEe
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFD---TR-LRKLLKDLNVI-DLFDAVVI  191 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~---~~-~~~~l~~~gl~-~~f~~i~~  191 (261)
                      .++|++.++++.|+++|++++++||+.   .. +...++.+|+. ...+.+++
T Consensus        37 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~~i~~   89 (306)
T 2oyc_A           37 RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFS   89 (306)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGGGEEE
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChhhEEc
Confidence            677899999999999999999999733   33 56777888876 33445554

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=87.39  E-value=0.92  Score=35.93  Aligned_cols=41  Identities=17%  Similarity=0.278  Sum_probs=34.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID  184 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~  184 (261)
                      .+.+...++|++|+++|++++++|+.+.. +..+++.+++..
T Consensus        22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~   63 (282)
T 1rkq_A           22 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ   63 (282)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence            45567789999999999999999998866 788888888753

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=84.33  E-value=2.3  Score=33.09  Aligned_cols=48  Identities=23%  Similarity=0.250  Sum_probs=36.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCc---hH-HHHHHHhcCcccccceEEe
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFD---TR-LRKLLKDLNVIDLFDAVVI  191 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~---~~-~~~~l~~~gl~~~f~~i~~  191 (261)
                      .+.|++.++++.|++.|+++.++||..   .. +...++.+|+....+.++.
T Consensus        33 ~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~   84 (271)
T 1vjr_A           33 SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVT   84 (271)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEE
T ss_pred             EECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEc
Confidence            678999999999999999999999643   33 5677788887533334444

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=83.43  E-value=2.3  Score=33.23  Aligned_cols=48  Identities=13%  Similarity=0.203  Sum_probs=35.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEe
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVI  191 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~  191 (261)
                      .+.+...++++.++++|+.++++|+.+.. +..+++.+|+....+.+++
T Consensus        22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~   70 (279)
T 3mpo_A           22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAIT   70 (279)
T ss_dssp             --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEE
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEE
Confidence            34456778899999999999999998866 7888888887643334444

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=82.71  E-value=0.51  Score=34.92  Aligned_cols=18  Identities=17%  Similarity=0.209  Sum_probs=15.2

Q ss_pred             ccccEEEEccCCcccccc
Q 024886           48 KAYDAVLLDAGGTLLQLA   65 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~   65 (261)
                      .+.+++++|+|+||+++.
T Consensus        13 ~~k~~LVLDLD~TLvhs~   30 (181)
T 2ght_A           13 SDKICVVINLDETLVHSS   30 (181)
T ss_dssp             TTSCEEEECCBTTTEEEE
T ss_pred             CCCeEEEECCCCCeECCc
Confidence            356899999999999864

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=82.32  E-value=1.7  Score=34.25  Aligned_cols=39  Identities=23%  Similarity=0.166  Sum_probs=33.0

Q ss_pred             CccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccc
Q 024886          146 PHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVID  184 (261)
Q Consensus       146 ~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~  184 (261)
                      .+...++|+.|+++|++++++|+.+.. +..+++.+++..
T Consensus        28 ~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   67 (275)
T 1xvi_A           28 WQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   67 (275)
T ss_dssp             CCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             CHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            456789999999999999999998866 788888888753

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=81.79  E-value=2.9  Score=32.62  Aligned_cols=40  Identities=13%  Similarity=0.326  Sum_probs=33.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI  183 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~  183 (261)
                      .+.+...++++.++++|+.++++|+.+.. +..+++.+++.
T Consensus        22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   62 (279)
T 4dw8_A           22 EISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMN   62 (279)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCC
Confidence            44567889999999999999999998866 78888888874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	261
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	2e-11
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	3e-10
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	5e-10
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	9e-09
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	9e-08
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	1e-07
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	4e-07
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	7e-07
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	7e-07
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	3e-06
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	4e-06
d1swva_	257	c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba	2e-05
d1zrna_	220	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse	2e-05
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	4e-05
d2c4na1	250	c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId	4e-05
d1wvia_	253	c.108.1.14 (A:) Putative phosphatase SMU.1415c {St	6e-05
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	5e-04
d1vjra_	261	c.108.1.14 (A:) Hypothetical protein TM1742 {Therm	8e-04
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	9e-04
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	0.001
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	0.001
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	0.002

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.4 bits (142), Expect = 2e-11
 Identities = 31/201 (15%), Positives = 60/201 (29%), Gaps = 13/201 (6%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVD---SADIKKGFRKAFAAPWPEKLRYEG 108
               D  G L   +  +   +        L  D    A   +            K+ +  
Sbjct: 2   VAAFDLDGVLALPS--IAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQ 59

Query: 109 DGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLP--HGAYQSILLLKDAGVKVAVV 166
                       +  C  +                         Q+ + LK  G    +V
Sbjct: 60  WVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCIV 119

Query: 167 S-----NFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH 221
           +     + D R         +   FD ++ S +VG  KP+P+I+   LD +  + +  V 
Sbjct: 120 TNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVF 179

Query: 222 IGDDEKADKQGANSLGIDCWL 242
           + D   ++ + A  +G+   L
Sbjct: 180 LDDFG-SNLKPARDMGMVTIL 199

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (134), Expect = 3e-10
 Identities = 39/203 (19%), Positives = 72/203 (35%), Gaps = 17/203 (8%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGR 111
           A + D  G L   A  V            L      +   F+K        +L       
Sbjct: 4   AAVFDLDGVLALPA--VFGVLGRTEEALALPRG--LLNDAFQKGGPEGATTRLMKGEITL 59

Query: 112 PFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWH-------LPHGAYQSILLLKDAGVKVA 164
             W  ++ E     ++     + + ++  E +        +     Q+ L+L+  G   A
Sbjct: 60  SQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTA 119

Query: 165 VVS-----NFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRT 219
           +++     +   R         +   FD ++ S +VG  KP+P+I+K  LD +    S  
Sbjct: 120 ILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEV 179

Query: 220 VHIGDDEKADKQGANSLGIDCWL 242
           V + D   A+ + A  LG+   L
Sbjct: 180 VFLDDIG-ANLKPARDLGMVTIL 201

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 55.5 bits (132), Expect = 5e-10
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 53  VLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRP 112
            + D G  ++ +         + +    + + S        +AF        ++E  G  
Sbjct: 3   YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFH-------QHE-RGEI 52

Query: 113 FWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR 172
                              E + +  +     L       +  L++ G +V V+SN +  
Sbjct: 53  SDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRL 112

Query: 173 LRKLLKD--LNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK 230
                 +    + D  D + +S ++G  KP+ RI++  L       S TV   D+   + 
Sbjct: 113 HTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNA-DNI 171

Query: 231 QGANSLGIDCWL 242
           +GAN LGI   L
Sbjct: 172 EGANQLGITSIL 183

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.1 bits (123), Expect = 9e-09
 Identities = 22/201 (10%), Positives = 49/201 (24%), Gaps = 10/201 (4%)

Query: 50  YDAVLLDAGGTLL-------QLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPE 102
           Y   LLD  GT+         L          + ++   +   ++I   F          
Sbjct: 3   YSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQA 62

Query: 103 KLRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYA-KGEAWHLPHGAYQSILLLKDAGV 161
            +           ++           Y     +          +       I        
Sbjct: 63  HILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKA 122

Query: 162 KVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH 221
           +  +              L++    D          +K + + +   L  +  +AS  + 
Sbjct: 123 QKLLFGYVQDPNAPAHDSLDLNSYID-GYFDINTSGKKTETQSYANILRDIGAKASEVLF 181

Query: 222 IGDDEKADKQGANSLGIDCWL 242
           + D+   +   A  +GI   L
Sbjct: 182 LSDNP-LELDAAAGVGIATGL 201

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 49.4 bits (116), Expect = 9e-08
 Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 5/189 (2%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGR 111
           AV+ DA GTL  +    + T  +   +          K+       A       +    R
Sbjct: 4   AVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63

Query: 112 PFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDT 171
                 +       ++ +  ++ + Y +   +         +  LK A     + +    
Sbjct: 64  EALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRA----ILSNGAPD 119

Query: 172 RLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQ 231
            L+ L+ +  + D FDAV+        KP P  +    + + V  +  + +  +   D  
Sbjct: 120 MLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNG-FDVG 178

Query: 232 GANSLGIDC 240
           GA + G   
Sbjct: 179 GAKNFGFSV 187

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.5 bits (116), Expect = 1e-07
 Identities = 36/201 (17%), Positives = 64/201 (31%), Gaps = 9/201 (4%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKL------- 104
           AV  D   TL+  A         + +         +  +           ++        
Sbjct: 8   AVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTC 67

Query: 105 RYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLP--HGAYQSILLLKDAGVK 162
             +     +   +     G  N    EE Y  +      H+         +  L+     
Sbjct: 68  ITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRL 127

Query: 163 VAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI 222
           + + +      R+ ++       FDA+VI  E   EKP P IF    D + V+    V +
Sbjct: 128 LLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 187

Query: 223 GDDEKADKQGANSLGIDCWLW 243
           GD  + D QG  + G+   +W
Sbjct: 188 GDTLETDIQGGLNAGLKATVW 208

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 47.0 bits (110), Expect = 4e-07
 Identities = 37/207 (17%), Positives = 76/207 (36%), Gaps = 25/207 (12%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
           Y   + D GGTLL   E     +      YG+  D   + +  + +              
Sbjct: 3   YHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETF------ 56

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKG-EAWHLPHGAYQSILLLKDAGVKVAVVSN 168
                            +++ E+  E  A+  E   L  G    +  + + G +  +VS+
Sbjct: 57  -------------APNLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSH 103

Query: 169 FDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKA 228
            + ++ ++L+  ++   F  VV SS     KP+P       ++  +     + IGD    
Sbjct: 104 RNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIGDRP-I 160

Query: 229 DKQGANSLGIDCWL--WGIDVKTFSDV 253
           D +   + G+D  L    ++++   D+
Sbjct: 161 DIEAGQAAGLDTHLFTSIVNLRQVLDI 187

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (109), Expect = 7e-07
 Identities = 20/220 (9%), Positives = 55/220 (25%), Gaps = 29/220 (13%)

Query: 51  DAVLLDAGGTLLQLAEPVEETY----ASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRY 106
             +LLD  GT   +A   +  +     ++      + +  + ++           +    
Sbjct: 8   TVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLD 67

Query: 107 EGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPH------------------- 147
                P       +          + V    +                            
Sbjct: 68  GAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAE 127

Query: 148 ---GAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAV-VISSEVGCEKPDP 202
                  ++   ++AG+KV + S+      + L       D+ + V          K + 
Sbjct: 128 FFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVES 187

Query: 203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL 242
             ++   D +    +  + + D    +   A    +   +
Sbjct: 188 ESYRKIADSIGCSTNNILFLTDVT-REASAAEEADVHVAV 226

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 46.4 bits (108), Expect = 7e-07
 Identities = 33/196 (16%), Positives = 65/196 (33%), Gaps = 5/196 (2%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE 107
             +  +  D  GTL+     +  +  S  +   L   S ++   +    A    ++    
Sbjct: 2   TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDW 61

Query: 108 GDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVS 167
              +    L   E         F   Y          L     +++  LK  G  +AVV+
Sbjct: 62  ACKQAEKELTEDEFKYFKRQFGF---YYGENLCNISRLYPNVKETLEALKAQGYILAVVT 118

Query: 168 NFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDE 226
           N  T+ ++ +L    +  LF  ++    +   KP P  F     +  +   + + +GD +
Sbjct: 119 NKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQ 178

Query: 227 KADKQGANSLGIDCWL 242
                 A+S G     
Sbjct: 179 NDI-FAAHSAGCAVVG 193

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 44.8 bits (104), Expect = 3e-06
 Identities = 39/193 (20%), Positives = 70/193 (36%), Gaps = 7/193 (3%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
           + AVL D  G +   AE     + ++A + G+N       +  +         +   +  
Sbjct: 2   FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLK-----GVSREDSLQKI 56

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNF 169
                + V +E          +   +         +  G  Q +  L+   +K+A+ S  
Sbjct: 57  LDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS 116

Query: 170 DTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKAD 229
                 LL+ +N+   FDA+   +EV   KP P IF AA   + V  S ++ + D + A 
Sbjct: 117 KNG-PFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQ-AG 174

Query: 230 KQGANSLGIDCWL 242
            Q     G     
Sbjct: 175 IQAIKDSGALPIG 187

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 44.5 bits (103), Expect = 4e-06
 Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 6/194 (3%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYG-----LNVDSADIKKGFRKAFAAPWPEKLRY 106
           AV  D  GTLL +    +     +    G           + +K  R+AF+    +  R 
Sbjct: 4   AVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRP 63

Query: 107 EGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVV 166
             D        ++E  G    + F E++    +     L     + +  LK       + 
Sbjct: 64  IRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQ-RYGELYPEVVEVLKSLKGKYHVGMIT 122

Query: 167 SNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDE 226
            +    L   L  L + DLFD++  S E G  KP PRIF+ AL +  V+    V++GD+ 
Sbjct: 123 DSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNP 182

Query: 227 KADKQGANSLGIDC 240
             D  G+ +LG+  
Sbjct: 183 VKDCGGSKNLGMTS 196

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

 Score = 42.5 bits (98), Expect = 2e-05
 Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 7/202 (3%)

Query: 50  YDAVLLDAGGTLLQLAEPVE-ETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEG 108
            +AV+    GT +        E +  I  K G+ + + + +K                  
Sbjct: 2   IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPR 61

Query: 109 DGRPFWRLVVSEATGCTNDDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVV 166
               + R+     T     + +EE  E             +G  + I  L++ G+K+   
Sbjct: 62  IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGST 121

Query: 167 SNFDTRLRKLLKDL--NVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGD 224
           + +   +  ++           D +V   +V   +P P +      ++ V     +    
Sbjct: 122 TGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVG 181

Query: 225 DEKADKQGANSLGIDCW--LWG 244
           D  +D +   + G+     + G
Sbjct: 182 DTVSDMKEGRNAGMWTVGVILG 203

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

 Score = 42.2 bits (97), Expect = 2e-05
 Identities = 32/190 (16%), Positives = 60/190 (31%), Gaps = 5/190 (2%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGR 111
            +  D  GTL  +   V           G  + +   +K     +      +        
Sbjct: 4   GIAFDLYGTLFDV-HSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQAT 62

Query: 112 PFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDT 171
                      G   D              A         S+  LK  G+K+A++SN   
Sbjct: 63  EDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEV--PDSLRELKRRGLKLAILSNGSP 120

Query: 172 R-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK 230
           + +  ++    + D FD ++    V   KPD R+++ A   + ++ S  + +  +   D 
Sbjct: 121 QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASN-AWDA 179

Query: 231 QGANSLGIDC 240
            GA   G   
Sbjct: 180 TGARYFGFPT 189

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 42.1 bits (98), Expect = 4e-05
 Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 31/128 (24%)

Query: 148 GAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISS------------- 193
                +  LK AG ++ + +           ++L ++  F+A  I++             
Sbjct: 219 EVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQ 278

Query: 194 EVGCEKPDPRIFKAALDQM--------------SVEASRTVHIGDDEKADKQGANSLGID 239
                KP+P  + AAL                  V       +GD   AD   A  +G  
Sbjct: 279 ARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGAT 337

Query: 240 CW--LWGI 245
               L G+
Sbjct: 338 FIGTLTGL 345

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

 Score = 41.6 bits (96), Expect = 4e-05
 Identities = 32/230 (13%), Positives = 62/230 (26%), Gaps = 24/230 (10%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIA--RKYGLNV---------DSADIKKGFRKAFAA 98
              V+ D  G L+     V      +      GL +            D+   F  A   
Sbjct: 3   IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62

Query: 99  PWP-----------EKLRYEGDGRPFWRLV--VSEATGCTNDDYFEEVYEYYAKGEAWHL 145
                         + LR +   + +      +            +   ++   GE    
Sbjct: 63  VPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSY 122

Query: 146 PHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIF 205
                         G +    +              +    + +         KP P I 
Sbjct: 123 NWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWII 182

Query: 206 KAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN 255
           +AAL++M   +  TV +GD+ + D       G++  L    V +  D+ +
Sbjct: 183 RAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDS 232

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

 Score = 40.8 bits (94), Expect = 6e-05
 Identities = 35/235 (14%), Positives = 73/235 (31%), Gaps = 29/235 (12%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIA--RKYGLNV---------DSADIKKGFRKAFAA 98
           Y   L+D  GT+ +  + +      +   ++  L               +++    +F  
Sbjct: 2   YKGYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNI 61

Query: 99  PWPEK------------LRYEGDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLP 146
             P +            +     G+  + +  +       +  + E  E  A        
Sbjct: 62  KTPLETIYTATLATIDYMNDMKRGKTAYVIGETGLKKAVAEAGYREDSENPAYVVVGLDT 121

Query: 147 HGAYQSILL--LKDAGVKVAVVSNFDTRL---RKLLKDL-NVIDLFDAVVISSEVGCEKP 200
           +  Y+ + L  L      V + +N D  +   R LL     ++ L +       +   KP
Sbjct: 122 NLTYEKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKP 181

Query: 201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN 255
           +  I   ALD++ V+    + +GD+   D        I   L         +V  
Sbjct: 182 EAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPA 236

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.5 bits (86), Expect = 5e-04
 Identities = 20/115 (17%), Positives = 34/115 (29%), Gaps = 6/115 (5%)

Query: 140 GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEK 199
           G+   L     + +  L+  GV VA  S                     +          
Sbjct: 42  GQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREI---YPG 98

Query: 200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWL--WGIDVKTFSD 252
                F+    +  V  S+ V   DDE  +      LG+ C     G+ ++T + 
Sbjct: 99  SKVTHFERLHHKTGVPFSQMVFF-DDENRNIIDVGRLGVTCIHIRDGMSLQTLTQ 152

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.7 bits (86), Expect = 8e-04
 Identities = 27/237 (11%), Positives = 55/237 (23%), Gaps = 29/237 (12%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIA--RKYGLNV--------DSADIKKGFRKAFA 97
              +  +LD  GT       +  +   +   ++               A       +   
Sbjct: 5   DKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMG 64

Query: 98  APWPEK---------LRYEGDGRPFWRLVVSEATGCTND--------DYFEEVYEYYAKG 140
              P+            +        R+ +                 D     +      
Sbjct: 65  VDVPDDAVVTSGEITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFD 124

Query: 141 EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVID--LFDAVVISSEVGCE 198
           +           ILL K                   + D   I   +  +     ++   
Sbjct: 125 KTLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAG 184

Query: 199 KPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN 255
           KP+P +     ++  V   R   +GD    D +   + GI   L      T  D++ 
Sbjct: 185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLER 241

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 37.1 bits (84), Expect = 9e-04
 Identities = 37/191 (19%), Positives = 61/191 (31%), Gaps = 14/191 (7%)

Query: 52  AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGR 111
           A + D  GTLL   E +         ++ +  D   +++ F   ++         E    
Sbjct: 3   AFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVRE-FIFKYSVQDLLVRVAEDRNL 61

Query: 112 PFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDT 171
               L    A      +    +     +  AW    G  Q I             ++   
Sbjct: 62  DVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFI------------YTHKGN 109

Query: 172 RLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQ 231
               +LKDL V   F  ++ S      KP P      LD+  + +  T +IGD    D +
Sbjct: 110 NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRT-LDVE 168

Query: 232 GANSLGIDCWL 242
            A + GI    
Sbjct: 169 FAQNSGIQSIN 179

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 26/209 (12%), Positives = 58/209 (27%), Gaps = 11/209 (5%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
           +D ++ D  G L+       +  + +  + G  +   ++ + F          ++  E  
Sbjct: 2   FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEAS 61

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNF 169
                             D  E++ +   + +   +    +    L     +     S+ 
Sbjct: 62  IPLSAS----------LLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHR 111

Query: 170 DTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKAD 229
              +   +                     KP P IF     Q  V   R V + D     
Sbjct: 112 LDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSV-HG 170

Query: 230 KQGANSLGIDCWLWGIDVKTFSDVQNRIL 258
             GA + G+    +     T+    +R+ 
Sbjct: 171 IHGARAAGMRVIGFTGASHTYPSHADRLT 199

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 25/195 (12%), Positives = 59/195 (30%), Gaps = 9/195 (4%)

Query: 48  KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE 107
           +   A + D  G L+      +     +    G+++   +                +   
Sbjct: 1   RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNE---LPDTLGLRIDMVVDLW 57

Query: 108 GDGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVS 167
              +P+      E            V E         LP       L  +   +     +
Sbjct: 58  YARQPWNGPSRQEVVERVIARAISLVEETR-----PLLPGVREAVALCKEQGLLVGLASA 112

Query: 168 NFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEK 227
           +    L K+L   ++ D FDA+  + ++   KP P+++     ++ V+    V + D   
Sbjct: 113 SPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSV- 171

Query: 228 ADKQGANSLGIDCWL 242
                + +  +   +
Sbjct: 172 NGMIASKAARMRSIV 186

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 36.0 bits (81), Expect = 0.002
 Identities = 38/199 (19%), Positives = 62/199 (31%), Gaps = 18/199 (9%)

Query: 50  YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGD 109
           Y A++ D  GTL             +   YG     A  +K F  A      E      +
Sbjct: 3   YQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTELGIAASE 62

Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNF 169
              F       A          +  E Y    +      +               V S  
Sbjct: 63  FDHFQ------AQYEDVMASHYDQIELYPGITSLFEQLPSEL---------RLGIVTSQR 107

Query: 170 DTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKAD 229
              L   ++    +      + + +    KPDP     AL++++V     + IGD   +D
Sbjct: 108 RNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSV-SD 166

Query: 230 KQGANSLGIDCWL--WGID 246
           +Q A +  +D  L  WG+D
Sbjct: 167 EQTAQAANVDFGLAVWGMD 185

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	261
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.98
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.97
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.97
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.97
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.97
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.97
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.96
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.96
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.96
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.96
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.95
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.95
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.94
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.94
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.93
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.93
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.93
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.9
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.9
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.87
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.84
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.84
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.82
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.8
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.78
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.78
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.76
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.74
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.73
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.71
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.66
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.54
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.52
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	99.42
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.41
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.35
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	99.31
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.28
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	99.19
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	99.15
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	99.13
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.08
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	99.06
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	99.01
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	99.0
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.96
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	98.95
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	98.81
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	98.7
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	98.68
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	98.64
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	98.45
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.38
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	98.21
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	98.09
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	98.01
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.93
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.82
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	96.19
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	91.58
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	88.82
d1xm3a_	251	Thiazole biosynthesis protein ThiG {Bacillus subti	86.55
d2pjua1	186	Propionate catabolism operon regulatory protein Pr	84.8
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	84.8
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	82.59

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.98  E-value=5.2e-31  Score=203.60  Aligned_cols=192  Identities=19%  Similarity=0.246  Sum_probs=150.4

Q ss_pred             cEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchHHH
Q 024886           51 DAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDYF  130 (261)
Q Consensus        51 k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (261)
                      ++++||+||||+|+...+..++.++++++|.+.+.+.....+...             .....+..+... .....+ ..
T Consensus         2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~~~~~~-~~   66 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKY-------------SVQDLLVRVAED-RNLDVE-VL   66 (204)
T ss_dssp             CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHS-------------CHHHHHHHHHHH-HTCCHH-HH
T ss_pred             EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhccc-------------ccccccccccch-hhhhHH-HH
Confidence            589999999999998888899999999999988776655433221             112222332222 222233 33


Q ss_pred             HHHH-HHHhhC-CceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHH
Q 024886          131 EEVY-EYYAKG-EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAA  208 (261)
Q Consensus       131 ~~~~-~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~  208 (261)
                      .... .++... ....++||+.++|+.|+++|++++|+||+......+++.+|+..+|+.++++++.+..||++++|..+
T Consensus        67 ~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~  146 (204)
T d2go7a1          67 NQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYL  146 (204)
T ss_dssp             HHHHHHHHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHH
T ss_pred             HHHHHHHHHhhcccCcccchHHhhhhcccccccchhhhcccchhhhhhhhhcccccccccccccccccccchhHHHHHHH
Confidence            3333 333222 23688999999999999999999999998777677899999999999999999999999999999999


Q ss_pred             HHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC-------CCChHHHHHhhh
Q 024886          209 LDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID-------VKTFSDVQNRIL  258 (261)
Q Consensus       209 ~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~-------~~~~~el~~~l~  258 (261)
                      ++++|++|++|++|||+ .+|+++|+++|+.++++.++       ..++.++.++++
T Consensus       147 ~~~~~~~p~~~l~VgD~-~~Di~~A~~~G~~~i~v~~~~~~~~~~~~~~~dl~~l~~  202 (204)
T d2go7a1         147 LDKYQLNSDNTYYIGDR-TLDVEFAQNSGIQSINFLESTYEGNHRIQALADISRIFE  202 (204)
T ss_dssp             HHHHTCCGGGEEEEESS-HHHHHHHHHHTCEEEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred             HHHhCCCCceEEEEeCC-HHHHHHHHHcCCeEEEEcCCCCCcCeecCCHHHHHHHhc
Confidence            99999999999999999 89999999999999999877       456666666553

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.97  E-value=6.6e-31  Score=203.48  Aligned_cols=186  Identities=19%  Similarity=0.258  Sum_probs=146.6

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcC-CCc
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG-CTN  126 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  126 (261)
                      |++|+|+||+||||+|+...+.++|.++++++|.+.+.++....+...                 ..+.+...... ...
T Consensus         1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~   63 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMA-----------------AEQAMTELGIAASEF   63 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSC-----------------HHHHHHHTTCCGGGH
T ss_pred             CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcch-----------------hhhhhhccccchhhH
Confidence            568999999999999998888999999999999998887665432110                 00111111111 112


Q ss_pred             hHHHHHHHHHHhhC-CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHH
Q 024886          127 DDYFEEVYEYYAKG-EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRI  204 (261)
Q Consensus       127 ~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~  204 (261)
                      +.+.....+.+... ...+++||+.++|+.|++ +++++|+||+... +..+++.+|+..+|+.++++++.+.+||+|.+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~  142 (207)
T d2hdoa1          64 DHFQAQYEDVMASHYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLP  142 (207)
T ss_dssp             HHHHHHHHHHHTTCGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHH
T ss_pred             HHHHHHhhhhhcccccccccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence            23333444444332 236899999999999975 5999999998877 79999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHH
Q 024886          205 FKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       205 ~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~e  252 (261)
                      |+.+++++|++|++|++|||+ .+|+++|+++|+.++++..+..+..+
T Consensus       143 ~~~~~~~~~~~~~~~l~VgDs-~~Di~~a~~aG~~~i~v~~g~~~~~~  189 (207)
T d2hdoa1         143 LLTALEKVNVAPQNALFIGDS-VSDEQTAQAANVDFGLAVWGMDPNAD  189 (207)
T ss_dssp             HHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEEEGGGCCTTGG
T ss_pred             hcccccceeeeccceeEecCC-HHHHHHHHHcCCeEEEEecCCCChhH
Confidence            999999999999999999999 89999999999999999776554443

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=4.3e-30  Score=200.28  Aligned_cols=183  Identities=16%  Similarity=0.201  Sum_probs=140.8

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCC-hhHHHHHHHHhcC--CC
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDG-RPFWRLVVSEATG--CT  125 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~  125 (261)
                      ++++++||+||||+|+...+..++.++++++|++++.....              ....+.. ...+.........  ..
T Consensus         2 ~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~   67 (218)
T d1te2a_           2 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNEL--------------PDTLGLRIDMVVDLWYARQPWNGPS   67 (218)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGS--------------CCCTTCCHHHHHHHHHHHSCCSSSC
T ss_pred             cceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHH--------------HHHhCCCccchhhhhhhcccccchh
Confidence            68999999999999988888889999999999875443211              0111111 1122222222111  12


Q ss_pred             chHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCH
Q 024886          126 NDDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       126 ~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~  202 (261)
                      .....+...+.+...  ...+++||+.++|+.|+++|++++|+||++.. ++.+++.+|+.++|+.++++++++.+||+|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~  147 (218)
T d1te2a_          68 RQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHP  147 (218)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTST
T ss_pred             HHHHHHHHHHHHHHhhhccccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhH
Confidence            233334433333221  12367899999999999999999999999877 799999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++|+.+++++|++|+++++|||+ .+|+.+|+++|+.+|+|..+
T Consensus       148 ~~~~~~~~~l~~~~~~~l~igD~-~~di~aA~~~G~~~i~v~~~  190 (218)
T d1te2a_         148 QVYLDCAAKLGVDPLTCVALEDS-VNGMIASKAARMRSIVVPAP  190 (218)
T ss_dssp             HHHHHHHHHHTSCGGGEEEEESS-HHHHHHHHHTTCEEEECCCT
T ss_pred             HHHHHHHHHcCCCchhcEEEeeC-HHHHHHHHHcCCEEEEECCC
Confidence            99999999999999999999999 89999999999999998665

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.97  E-value=8e-30  Score=194.32  Aligned_cols=176  Identities=21%  Similarity=0.303  Sum_probs=140.9

Q ss_pred             ccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCch
Q 024886           48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTND  127 (261)
Q Consensus        48 ~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (261)
                      |++|+|+||+||||+|+...+..++.++++++|.+.+.+.....+.....                  ...... ....+
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~   61 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTP------------------FAIETF-APNLE   61 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHH------------------HHHHHH-CTTCT
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHHHHhhhhccch------------------hhhhhh-hHHHH
Confidence            67899999999999999888889999999999998877766554432111                  111111 12233


Q ss_pred             HHHHHHHHHHhh-CCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCCCHHHHH
Q 024886          128 DYFEEVYEYYAK-GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFK  206 (261)
Q Consensus       128 ~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~  206 (261)
                      .+.+.+.+.+.. .....++||+.++|+.|++.|++++|+||++..+...++.+++..+|+.++++++++..||+|++|.
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~  141 (187)
T d2fi1a1          62 NFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESML  141 (187)
T ss_dssp             THHHHHHHHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHH
T ss_pred             HHHHHHHHHHHHHhhcCcccchhHHHHHHHHhhhccccccccCccchhhhhhhhccccccccccccccccccCCCHHHHH
Confidence            344444433322 2345889999999999999999999999988776668999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECC
Q 024886          207 AALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGI  245 (261)
Q Consensus       207 ~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~  245 (261)
                      .+++++++  +++++|||+ ..|+++|+++|+.++++..
T Consensus       142 ~~~~~~~~--~~~l~vgDs-~~Di~aA~~aG~~~i~v~~  177 (187)
T d2fi1a1         142 YLREKYQI--SSGLVIGDR-PIDIEAGQAAGLDTHLFTS  177 (187)
T ss_dssp             HHHHHTTC--SSEEEEESS-HHHHHHHHHTTCEEEECSC
T ss_pred             HHHHHcCC--CCeEEEeCC-HHHHHHHHHcCCEEEEECC
Confidence            99999996  459999999 8999999999999998854

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.97  E-value=1e-29  Score=198.62  Aligned_cols=192  Identities=18%  Similarity=0.194  Sum_probs=142.3

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN  126 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (261)
                      |.++|+|+||+||||+|+...+..++.++++++|.+....+....+   .+......      .................
T Consensus         1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~~~~~~~~   71 (224)
T d2hsza1           1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTW---IGNGADVL------SQRAVDWACKQAEKELT   71 (224)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHH---CSSCHHHH------HHHHHHHHHHHHTCCCC
T ss_pred             CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHH---hhhhhhhh------hhhhhhhhhhhhhhhhh
Confidence            4578999999999999998888899999999999875444332211   11100000      00011111111111111


Q ss_pred             hHHHHHHH----HHHh--hCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCC
Q 024886          127 DDYFEEVY----EYYA--KGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEK  199 (261)
Q Consensus       127 ~~~~~~~~----~~~~--~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~K  199 (261)
                      ........    ..+.  ......++||+.++|+.|++.|++++++||++.. +..+++.+|+..+|+.++++++.+..|
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~k  151 (224)
T d2hsza1          72 EDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIK  151 (224)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCT
T ss_pred             HHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccccccccc
Confidence            11111111    1111  1233689999999999999999999999999877 799999999999999999999999999


Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      |+|..|..++++++++++++++|||+ .+|+++|+++|+.+|++.++..
T Consensus       152 p~p~~~~~~~~~~~~~~~~~~~igD~-~~Di~~A~~aG~~~i~v~~g~~  199 (224)
T d2hsza1         152 PHPAPFYYLCGKFGLYPKQILFVGDS-QNDIFAAHSAGCAVVGLTYGYN  199 (224)
T ss_dssp             TSSHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHHTCEEEEESSSCS
T ss_pred             ccchhhHHHHHHhhhhhhccchhcCc-HHHHHHHHHcCCeEEEEeCCCC
Confidence            99999999999999999999999999 8999999999999999987633

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.97  E-value=1.5e-29  Score=198.86  Aligned_cols=207  Identities=22%  Similarity=0.288  Sum_probs=144.0

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCC-CCCHHHHHHHHHHHhcCCCccccccCC-----CChhHHHHHHHHhc
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGL-NVDSADIKKGFRKAFAAPWPEKLRYEG-----DGRPFWRLVVSEAT  122 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  122 (261)
                      |+|+|+||+||||+|...........+.+.++. ..+.......+................     ......+.......
T Consensus         1 MiK~I~FD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (230)
T d1x42a1           1 MIRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPIRDIEEEVMRKLAEKYG   80 (230)
T ss_dssp             CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHC
T ss_pred             CCeEEEEeCCCCcEechhhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhh
Confidence            579999999999999776655555555555442 344444333332222111111100000     01122233333333


Q ss_pred             CCCchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCC
Q 024886          123 GCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPD  201 (261)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~  201 (261)
                      ....+.+.+.....+...  ..++||+.++|+.|++ |++++++||++.. +...++.+|+..+|+.++++++.+..||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~  157 (230)
T d1x42a1          81 FKYPENFWEIHLRMHQRY--GELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPH  157 (230)
T ss_dssp             CCCCTTHHHHHHHHHHHH--CCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTS
T ss_pred             hchHHHHHHHHHHHHHhh--CcccccHHHHHHHhhc-cCceeeeeccccccchhhhcccccccccccccccccccccchh
Confidence            322333333333333221  4789999999999974 6999999998877 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC-------------CCChHHHHHhhh
Q 024886          202 PRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID-------------VKTFSDVQNRIL  258 (261)
Q Consensus       202 ~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~-------------~~~~~el~~~l~  258 (261)
                      |++|+.+++++|++|++|++|||+..+|+++|+++|+.++++.++             +.+++||.++|.
T Consensus       158 ~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~  227 (230)
T d1x42a1         158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVD  227 (230)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHH
T ss_pred             hHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHH
Confidence            999999999999999999999998668999999999999999765             456677766664

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.96  E-value=1.5e-29  Score=202.13  Aligned_cols=194  Identities=15%  Similarity=0.172  Sum_probs=138.6

Q ss_pred             cccEEEEccCCccccccccH-HHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCc-
Q 024886           49 AYDAVLLDAGGTLLQLAEPV-EETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTN-  126 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  126 (261)
                      ++|+|+||+||||+|+.... ..++.+.++++|..++.++....+    +...................+......... 
T Consensus         1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (257)
T d1swva_           1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPM----GLLKIDHVRALTEMPRIASEWNRVFRQLPTE   76 (257)
T ss_dssp             CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTT----TSCHHHHHHHHHHSHHHHHHHHHHHSSCCCH
T ss_pred             CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHHHHHh----CCcHHHHHHHHhhhhhhhHHHHHHhcccCCH
Confidence            58999999999999986543 678899999999988776543211    100000000000001111111111111111 


Q ss_pred             ---hHHHHHHHHHHhh--CCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCccccc-ceEEecCCCCCCC
Q 024886          127 ---DDYFEEVYEYYAK--GEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLF-DAVVISSEVGCEK  199 (261)
Q Consensus       127 ---~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f-~~i~~~~~~~~~K  199 (261)
                         ........+.+..  .....++||+.++|+.|+++|++++|+||.+.. +...++.+|+..+| |.++++++.+.+|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~K  156 (257)
T d1swva_          77 ADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGR  156 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCT
T ss_pred             HHHHHHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccc
Confidence               1222222333322  122478999999999999999999999999877 78899999999887 8899999999999


Q ss_pred             CCHHHHHHHHHHcCCC-CCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          200 PDPRIFKAALDQMSVE-ASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~-~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      |+|++|..+++++|+. +++|+||||+ ..|+++|+++|+.+|+|.+|.
T Consensus       157 P~p~~~~~~~~~l~~~p~~~~v~VgDs-~~Di~aA~~aG~~ti~v~~G~  204 (257)
T d1swva_         157 PYPWMCYKNAMELGVYPMNHMIKVGDT-VSDMKEGRNAGMWTVGVILGS  204 (257)
T ss_dssp             TSSHHHHHHHHHHTCCSGGGEEEEESS-HHHHHHHHHTTSEEEEECTTC
T ss_pred             cChHHHHHHHHHhCCCCcceEEEEeCC-hhhHHHHHHCCCEEEEEccCC
Confidence            9999999999999995 5899999999 799999999999999997764

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.96  E-value=6.1e-30  Score=199.82  Aligned_cols=183  Identities=21%  Similarity=0.268  Sum_probs=137.9

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcC-CCch
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG-CTND  127 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  127 (261)
                      |+|+|+||+||||+|+...+.+++.+++.++|.+.........+.   +.          ........+...... ....
T Consensus         1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~   67 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLK---GV----------SREDSLQKILDLADKKVSAE   67 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHTTTT---TC----------CHHHHHHHHHTTSSSCCCHH
T ss_pred             CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHHHHh---hc----------cchhhhhhccccccccchhh
Confidence            689999999999999888888899999999998765544332100   00          001111111111110 1111


Q ss_pred             ---HHHHHHHHH----HhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecCCCCCCCC
Q 024886          128 ---DYFEEVYEY----YAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKP  200 (261)
Q Consensus       128 ---~~~~~~~~~----~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp  200 (261)
                         .+.....+.    +.......++||+.++|+.|++.|++++++||+. .....++.+|+..+|+.++++++.+.+||
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~-~~~~~l~~~~l~~~f~~i~~~~~~~~~KP  146 (221)
T d1o08a_          68 EFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK-NGPFLLERMNLTGYFDAIADPAEVAASKP  146 (221)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCT-THHHHHHHTTCGGGCSEECCTTTSSSCTT
T ss_pred             hhhhHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecc-hhhHHHHhhcccccccccccccccccccc
Confidence               111222222    2233346789999999999999999999999864 35788999999999999999999999999


Q ss_pred             CHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          201 DPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       201 ~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +|++|+.+++++|++|++|++|||+ ..|+++|+++|+.+|+|+++
T Consensus       147 ~~~~~~~~l~~~~i~~~~~l~VgD~-~~di~~A~~aG~~~i~v~~~  191 (221)
T d1o08a_         147 APDIFIAAAHAVGVAPSESIGLEDS-QAGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             STHHHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEEESCH
T ss_pred             ChHHHHHHHHHcCCCCceEEEEecC-HHHHHHHHHcCCEEEEECCh
Confidence            9999999999999999999999999 89999999999999999774

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=3.7e-29  Score=198.63  Aligned_cols=212  Identities=20%  Similarity=0.273  Sum_probs=145.1

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCC--H--HHHHHHHHHH-hcCCCcccccc-CCCChhHHHHHHHH
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVD--S--ADIKKGFRKA-FAAPWPEKLRY-EGDGRPFWRLVVSE  120 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~--~--~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~  120 (261)
                      |.++|+|+||+||||+|.......++.++++.++....  .  .......... ........... .......+...+..
T Consensus         3 m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (247)
T d2gfha1           3 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE   82 (247)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEcCCCCcCcChHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHH
Confidence            56899999999999999887777777777665432221  1  1111111111 11111110000 00001112222222


Q ss_pred             -hcCCCchHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC
Q 024886          121 -ATGCTNDDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG  196 (261)
Q Consensus       121 -~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~  196 (261)
                       ........+.+.....+...  ....++||+.++|+.|++ |++++++||++.. +...++..|+..+|+.++++++.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~  161 (247)
T d2gfha1          83 TKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK  161 (247)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS
T ss_pred             hccccchHHHHHHHHHHHHHhhhccCccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccccccc
Confidence             22334445555554444321  225789999999999984 7999999999877 688899999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC---------------CCChHHHHHhhhc
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID---------------VKTFSDVQNRILI  259 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~---------------~~~~~el~~~l~~  259 (261)
                      .+||+|++|+.+++.+|++|+++++|||++.+|+.+|+++|+.++++.++               +.++.||.++|.+
T Consensus       162 ~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~  239 (247)
T d2gfha1         162 EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQS  239 (247)
T ss_dssp             SCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHH
T ss_pred             cchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999668999999999986654222               4577777777754

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.96  E-value=4.4e-28  Score=187.71  Aligned_cols=188  Identities=18%  Similarity=0.228  Sum_probs=141.1

Q ss_pred             cccccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcC-CC
Q 024886           47 KKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATG-CT  125 (261)
Q Consensus        47 ~~~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  125 (261)
                      |.++|+|+||+||||+|+...+..++.++++++|.+....+...   ...+...              ......... ..
T Consensus         1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~   63 (210)
T d2ah5a1           1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIR---GFMGPPL--------------ESSFATCLSKDQ   63 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHH---HTSSSCH--------------HHHHHTTSCGGG
T ss_pred             CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHH---Hhhhcch--------------hhhccccccchh
Confidence            45789999999999999988888999999999998754332221   1111111              111111111 11


Q ss_pred             chHHHHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCH
Q 024886          126 NDDYFEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDP  202 (261)
Q Consensus       126 ~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~  202 (261)
                      .....+.....+...  ....++||+.++|+.|+.+ ++++++||++.. ++..++.+|+..+|+.++++++.  +||+|
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~--~~~~p  140 (210)
T d2ah5a1          64 ISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPE--APHKA  140 (210)
T ss_dssp             HHHHHHHHHHHHHHTGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSS--CCSHH
T ss_pred             hHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhccccccccccccccc--ccccc
Confidence            222223323322221  2358899999999999877 589999998877 79999999999999999998875  58888


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      ..|..+++.+|++|+++++|||+ .+|+.+|+++|+++++|.+|....+++.+
T Consensus       141 ~~~~~~~~~~~~~~~~~v~VGDs-~~Di~aa~~aGi~~i~v~~g~~~~~~l~~  192 (210)
T d2ah5a1         141 DVIHQALQTHQLAPEQAIIIGDT-KFDMLGARETGIQKLAITWGFGEQADLLN  192 (210)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEEESSSSSCHHHHHT
T ss_pred             cccchhhhhhhcccccceeecCC-HHHHHHHHHcCCeEEEEcCCCCCHHHHHh
Confidence            89999999999999999999999 89999999999999999888666666643

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.95  E-value=9.2e-28  Score=187.46  Aligned_cols=181  Identities=17%  Similarity=0.235  Sum_probs=139.4

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchHH
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDDY  129 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (261)
                      +|+||||+||||+|+...+..+|.++++++|++++.++....+.   +          .........+...........+
T Consensus         2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~---g----------~~~~~~~~~~~~~~~~~~~~~~   68 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFA---G----------MTWKNILLQVESEASIPLSASL   68 (222)
T ss_dssp             CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHT---T----------CCHHHHHHHHHHHHCCCCCTHH
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHh---h----------hccccccccccccccccccccc
Confidence            68999999999999988888999999999999988776544321   1          1112333444444433334455


Q ss_pred             HHHHHHHHhhC--CceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEec-CC--CCCCCCCHH
Q 024886          130 FEEVYEYYAKG--EAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVIS-SE--VGCEKPDPR  203 (261)
Q Consensus       130 ~~~~~~~~~~~--~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~-~~--~~~~Kp~~~  203 (261)
                      .+.....+...  ....++||+.++|+.|+.   +.+++|+.... +...++.+|+..+|+.++++ ++  .+..||+|+
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~  145 (222)
T d2fdra1          69 LDKSEKLLDMRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPD  145 (222)
T ss_dssp             HHHHHHHHHHHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSH
T ss_pred             hhHHHHHHHHHhhhccchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeecccccccccccccCHH
Confidence            55544444321  125789999999998864   56899998877 79999999999999876554 32  467899999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      .|..+++++|++|++|++|||+ ..|+++|+++|+.++++..+.
T Consensus       146 ~~~~~~~~l~~~p~~~l~vgDs-~~dv~aA~~aG~~~i~v~~~~  188 (222)
T d2fdra1         146 IFLHGAAQFGVSPDRVVVVEDS-VHGIHGARAAGMRVIGFTGAS  188 (222)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHTTCEEEEECCST
T ss_pred             HHHHHHHhhCCCCceEEEEcCC-HHHHHHHHHcCCEEEEEccCC
Confidence            9999999999999999999999 899999999999999997764

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.95  E-value=7.1e-28  Score=187.72  Aligned_cols=103  Identities=21%  Similarity=0.293  Sum_probs=98.0

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      ..++|++.++++.++..|++++++||+... .+..++..++..+||.++++++.+..||+|+.|+.+++++|++|++|+|
T Consensus        92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~  171 (220)
T d1zrna_          92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  171 (220)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEE
Confidence            588999999999999999999999999877 6888999999999999999999999999999999999999999999999


Q ss_pred             EcCCchhhhHHHHhCCCeEEEECCC
Q 024886          222 IGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      |||+ ..|+.+|+++|++++++.++
T Consensus       172 VgD~-~~Di~~A~~aG~~~v~v~r~  195 (220)
T d1zrna_         172 VASN-AWDATGARYFGFPTCWINRT  195 (220)
T ss_dssp             EESC-HHHHHHHHHHTCCEEEECTT
T ss_pred             EecC-hHhHHHHHHcCCEEEEEcCC
Confidence            9999 68999999999999999765

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.94  E-value=2.6e-27  Score=187.35  Aligned_cols=116  Identities=20%  Similarity=0.285  Sum_probs=101.4

Q ss_pred             CchHHHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHH
Q 024886          125 TNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~  203 (261)
                      ..+...+.+.+.+..   ..++|++.++|+.|+  ++.++++||+... +...++..++..+||.++++++.+..||+|+
T Consensus        77 ~~~~~~~~l~~~~~~---~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~  151 (245)
T d1qq5a_          77 PDESFLADMAQAYNR---LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPD  151 (245)
T ss_dssp             CCHHHHHHHHGGGGS---CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHH
T ss_pred             hHHHHHHHHHhcccc---cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccccCccHH
Confidence            344455555555443   578999999999886  5789999998877 7889999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +|..+++++|++|++|+||||+ ..||.+|+++||++++|.++
T Consensus       152 ~f~~a~~~lg~~p~e~l~VgD~-~~di~~A~~aG~~tv~v~r~  193 (245)
T d1qq5a_         152 SYALVEEVLGVTPAEVLFVSSN-GFDVGGAKNFGFSVARVARL  193 (245)
T ss_dssp             HHHHHHHHHCCCGGGEEEEESC-HHHHHHHHHHTCEEEEECCS
T ss_pred             HHHHHHHHhCCChhhEEEEeCC-HHHHHHHHHcCCeEEEEcCC
Confidence            9999999999999999999999 79999999999999999653

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.94  E-value=2.6e-27  Score=185.72  Aligned_cols=189  Identities=18%  Similarity=0.128  Sum_probs=134.2

Q ss_pred             ccEEEEccCCccccccccHHHHHHHHHHHh-CCCCCHHHHH-------HHHHHHhcCCCccccccCCCChhHHHHHHHHh
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETYASIARKY-GLNVDSADIK-------KGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEA  121 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~~~~~~~~-g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (261)
                      .|+|+||+||||+|+...+..++.+.+.+. +.........       ........        ............+   
T Consensus         2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~---   70 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLS--------NVGLERAEIADKF---   70 (228)
T ss_dssp             CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHH--------TTTCCHHHHHHHH---
T ss_pred             ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHHHHHhcCchHHHHHHHHH--------HhCCChHHHHHHH---
Confidence            378999999999999998888888877663 4432221110       00000000        0000010000000   


Q ss_pred             cCCCchHHHHHHHHHHh---hCCceeeCccHHHHHHHHHHCC-CeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCC
Q 024886          122 TGCTNDDYFEEVYEYYA---KGEAWHLPHGAYQSILLLKDAG-VKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVG  196 (261)
Q Consensus       122 ~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~l~~L~~~g-~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~  196 (261)
                           ....+.+...+.   ......++||+.++|+.|++.| ++++|+||++.. +...++.+|+.++|+.++++++..
T Consensus        71 -----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~  145 (228)
T d2hcfa1          71 -----DKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDAL  145 (228)
T ss_dssp             -----HHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCS
T ss_pred             -----HHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccc
Confidence                 111112222221   1234689999999999999987 899999998877 799999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHc---CCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          197 CEKPDPRIFKAALDQM---SVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l---~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      ..||+|..+...+..+   +++|++|++|||+ .+|+++|+++|+.+|+|..+..+.++|.+
T Consensus       146 ~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~-~~Di~aA~~aG~~~i~v~~g~~~~~~l~~  206 (228)
T d2hcfa1         146 DRNELPHIALERARRMTGANYSPSQIVIIGDT-EHDIRCARELDARSIAVATGNFTMEELAR  206 (228)
T ss_dssp             SGGGHHHHHHHHHHHHHCCCCCGGGEEEEESS-HHHHHHHHTTTCEEEEECCSSSCHHHHHT
T ss_pred             cccchhHHHHHHhhhhcccCCChhHheeecCC-hHHHHHHHHcCCEEEEEcCCCCCHHHHhh
Confidence            9999999877666666   8999999999999 79999999999999999988777777654

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.1e-26  Score=181.16  Aligned_cols=115  Identities=19%  Similarity=0.260  Sum_probs=104.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch----H-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT----R-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~----~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ..++|++.++|+.|+++|++++++||+..    . ....+...|+..+||.++++++++.+||+|++|+.+++.+|++|+
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~  175 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPN  175 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTT
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcc
Confidence            47899999999999999999999998532    2 356677889999999999999999999999999999999999999


Q ss_pred             cEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhhh
Q 024886          218 RTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       218 ~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~  258 (261)
                      +|+||||+ ..|+++|+++||.+++|.++....++|.+.+.
T Consensus       176 ~~l~IgD~-~~Di~~A~~aG~~ti~V~~~~~~~~el~~~~~  215 (222)
T d1cr6a1         176 EVVFLDDF-GSNLKPARDMGMVTILVHNTASALRELEKVTG  215 (222)
T ss_dssp             SEEEEESS-STTTHHHHHHTCEEEECCSSSHHHHHHHHHHS
T ss_pred             eEEEEECC-HHHHHHHHHcCCEEEEECCcchHHHHHHHhhC
Confidence            99999999 79999999999999999999888899887753

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.9e-25  Score=174.86  Aligned_cols=104  Identities=12%  Similarity=0.096  Sum_probs=93.0

Q ss_pred             ceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEec-CCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          142 AWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVIS-SEVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       142 ~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~-~~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      ...++||+.++|+.|+++|++++|+||++.. ....++..|+..+|+..... +....+||+|.+|..+++++|++|++|
T Consensus       125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~  204 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNI  204 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGE
T ss_pred             ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcE
Confidence            3578999999999999999999999999988 68888999998888755443 556678999999999999999999999


Q ss_pred             EEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          220 VHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       220 l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +||||+ .+|+.+|+++|+.+++|.++
T Consensus       205 l~vgD~-~~dv~aA~~aG~~ti~v~r~  230 (253)
T d1zs9a1         205 LFLTDV-TREASAAEEADVHVAVVVRP  230 (253)
T ss_dssp             EEEESC-HHHHHHHHHTTCEEEEECCT
T ss_pred             EEEeCC-HHHHHHHHHcCCEEEEEeCC
Confidence            999999 79999999999999999654

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9.5e-26  Score=175.46  Aligned_cols=115  Identities=23%  Similarity=0.264  Sum_probs=102.7

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-----HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-----LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-----~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ..++||+.++|..|+++|++++++||....     ........++..+||.++++++.+.+||+|++|+.+++.+|++|+
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~  177 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPS  177 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCcc
Confidence            488999999999999999999999986533     244555677889999999999999999999999999999999999


Q ss_pred             cEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhhh
Q 024886          218 RTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRIL  258 (261)
Q Consensus       218 ~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l~  258 (261)
                      +++||||+ ..|+++|+++|+++|+|.++....++|.++..
T Consensus       178 e~l~VgD~-~~Di~~A~~~G~~ti~v~~~~~~~~~l~~~~~  217 (225)
T d1zd3a1         178 EVVFLDDI-GANLKPARDLGMVTILVQDTDTALKELEKVTG  217 (225)
T ss_dssp             GEEEEESC-HHHHHHHHHTTCEEEECSSHHHHHHHHHHHHT
T ss_pred             ceeEEecC-HHHHHHHHHcCCEEEEECCcchhHHHHHHccC
Confidence            99999998 89999999999999999988777788877653

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=3.3e-24  Score=163.03  Aligned_cols=104  Identities=26%  Similarity=0.370  Sum_probs=94.5

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhc-CcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDL-NVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV  220 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~-gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  220 (261)
                      ..+++++.+++..++..|++++++||++.. ....+..+ ++..+|+.++++++.+..||+|++|+.+++.+|++|++|+
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l  162 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV  162 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEE
Confidence            578999999999999999999999998765 55556654 7889999999999999999999999999999999999999


Q ss_pred             EEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          221 HIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       221 ~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +|||+ .+|+++|+++|+.++++.++.
T Consensus       163 ~vgDs-~~di~~A~~aG~~ti~v~~~~  188 (197)
T d2b0ca1         163 FFDDN-ADNIEGANQLGITSILVKDKT  188 (197)
T ss_dssp             EEESC-HHHHHHHHTTTCEEEECCSTT
T ss_pred             EEeCC-HHHHHHHHHcCCEEEEECCCC
Confidence            99999 799999999999999997654

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=2.5e-23  Score=154.54  Aligned_cols=108  Identities=18%  Similarity=0.203  Sum_probs=95.9

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch-H-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT-R-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTV  220 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~-~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  220 (261)
                      ..++||+.++|+.|+++|++++|+||+.. . ....++.+++..+|+.+..     ..||+++.|..+++++|++|++++
T Consensus        45 ~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~kp~~~~~~~~~~~~~~~~~~~l  119 (164)
T d1u7pa_          45 IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREI-----YPGSKVTHFERLHHKTGVPFSQMV  119 (164)
T ss_dssp             ECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEE-----SSSCHHHHHHHHHHHHCCCGGGEE
T ss_pred             cccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeec-----ccCCChHHHHHHHHHhCCChHHEE
Confidence            58999999999999999999999998765 4 4677899999888888764     358999999999999999999999


Q ss_pred             EEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          221 HIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       221 ~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ||||+ ..|+++|+++|+.+|+|.+|. +.+++.+.+
T Consensus       120 ~igD~-~~di~aA~~aG~~~i~v~~G~-~~~~~~~~l  154 (164)
T d1u7pa_         120 FFDDE-NRNIIDVGRLGVTCIHIRDGM-SLQTLTQGL  154 (164)
T ss_dssp             EEESC-HHHHHHHHTTTCEEEECSSCC-CHHHHHHHH
T ss_pred             EEcCC-HHHHHHHHHcCCEEEEECCCC-ChHHHHHHH
Confidence            99999 899999999999999999886 677777655

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=4.7e-23  Score=151.84  Aligned_cols=114  Identities=20%  Similarity=0.364  Sum_probs=87.9

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch--------H--------HHHHHHhcCccc---ccceEEecCCCCCCCCCHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT--------R--------LRKLLKDLNVID---LFDAVVISSEVGCEKPDPR  203 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~--------~--------~~~~l~~~gl~~---~f~~i~~~~~~~~~Kp~~~  203 (261)
                      +.++||+.++|+.|++.|++++++||.+.        .        +...+...|+..   +|...+..++....||+|.
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~  108 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVK  108 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSG
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccH
Confidence            48899999999999999999999999641        1        234455555431   2222223345667899999


Q ss_pred             HHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          204 IFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       204 ~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      ++..+++++|++|++++||||+ ..|+++|+++|+.++++++...++..+.+-|
T Consensus       109 ~~~~~~~~~~id~~~~~~IGD~-~~Di~aA~~aG~~~i~i~~~~~~~~~i~~~~  161 (161)
T d2fpwa1         109 LVERYLAEQAMDRANSYVIGDR-ATDIQLAENMGINGLRYDRETLNWPMIGEQL  161 (161)
T ss_dssp             GGGGGC----CCGGGCEEEESS-HHHHHHHHHHTSEEEECBTTTBCHHHHHHHH
T ss_pred             HHHHHHHhcCCChhcEEEECCC-HHHHHHHHHcCCeEEEECCCCCCHHHHHhhC
Confidence            9999999999999999999999 7999999999999999999999998887643

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=5.3e-21  Score=148.48  Aligned_cols=98  Identities=16%  Similarity=0.172  Sum_probs=79.9

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchHH-HH-----------HHHhcCcccccceEEecCCCCCCCCCHHHHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTRL-RK-----------LLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALD  210 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~-~~-----------~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  210 (261)
                      ..+++++.+++..    +..+++.|+..... ..           .++.+|+.++|+.+++++..+ .||+|.+|..+++
T Consensus        96 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~-~KP~p~~f~~~~~  170 (225)
T d2g80a1          96 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG-KKTETQSYANILR  170 (225)
T ss_dssp             BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC-CTTCHHHHHHHHH
T ss_pred             ccchhhHHHHHhh----HHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccC-CCCChhHhHHHHH
Confidence            3566777776653    36788888876553 22           245568889999999886654 7999999999999


Q ss_pred             HcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          211 QMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       211 ~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++|++|++|+||||+ .+|+.+|+++|+.+++|.+.
T Consensus       171 ~lg~~p~e~l~VgD~-~~Dv~~A~~aG~~ti~v~r~  205 (225)
T d2g80a1         171 DIGAKASEVLFLSDN-PLELDAAAGVGIATGLASRP  205 (225)
T ss_dssp             HHTCCGGGEEEEESC-HHHHHHHHTTTCEEEEECCT
T ss_pred             hcccCchhceeecCC-HHHHHHHHHcCCEEEEEeCC
Confidence            999999999999999 79999999999999999764

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.84  E-value=6.8e-21  Score=146.15  Aligned_cols=101  Identities=24%  Similarity=0.327  Sum_probs=80.1

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCch---------H-------HHHHHHhcCcccccceEEecC------------C
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDT---------R-------LRKLLKDLNVIDLFDAVVISS------------E  194 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~---------~-------~~~~l~~~gl~~~f~~i~~~~------------~  194 (261)
                      +.++||+.++|+.|+++|++++|+||.+.         .       +...++..|+  +++.++.+.            +
T Consensus        47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~~~~~~~~~  124 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV--FVDMVLACAYHEAGVGPLAIPD  124 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC--CCSEEEEECCCTTCCSTTCCSS
T ss_pred             eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhccc--ccceEEEecccccccccccccc
Confidence            47899999999999999999999999541         1       2233444443  244444332            1


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ....||+|.++..+++++|+++++++||||+ .+|+++|+++|+.++++.++
T Consensus       125 ~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~-~~Di~aA~~AGi~~i~v~~g  175 (209)
T d2o2xa1         125 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDK-LADMQAGKRAGLAQGWLVDG  175 (209)
T ss_dssp             CTTSTTSCHHHHHHHHHHTCCGGGCEEEESS-HHHHHHHHHTTCSEEEEETC
T ss_pred             cccccccchhhhHhHHHhCCCccceEEeCCC-HHHHHHHHHCCCcEEEEeCC
Confidence            2345999999999999999999999999999 89999999999999888666

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.82  E-value=5.3e-20  Score=143.27  Aligned_cols=185  Identities=14%  Similarity=0.139  Sum_probs=118.2

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchH
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDD  128 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (261)
                      +..+|+||+||||++++     .+..+++.++.+ ........   ...        ........    ...........
T Consensus         3 ~k~lVifD~DGTL~~~d-----~~~~~~~~~~~~-~~~~i~~~---~~~--------~~~~~~~~----~~~~~~~~~~~   61 (226)
T d2feaa1           3 RKPFIICDFDGTITMND-----NIINIMKTFAPP-EWMALKDG---VLS--------KTLSIKEG----VGRMFGLLPSS   61 (226)
T ss_dssp             CCEEEEECCTTTTBSSC-----HHHHHHHHHSCT-HHHHHHHH---HHT--------TSSCHHHH----HHHHHTTSBGG
T ss_pred             CCeEEEEeCCCCCcCch-----HHHHHHHHHCcc-hHHHHHHH---HHc--------CcccHHHH----HHHHHHHhccc
Confidence            34679999999999865     345556666543 11111111   111        01111111    11122222222


Q ss_pred             HHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccce---EEec----------CC
Q 024886          129 YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDA---VVIS----------SE  194 (261)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~---i~~~----------~~  194 (261)
                      ..+.....+...  .+++||+.++++.|+++|++++++|++... ++.+++.+|+.++|-.   .+..          ..
T Consensus        62 ~~~~~~~~~~~~--~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~  139 (226)
T d2feaa1          62 LKEEITSFVLED--AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCK  139 (226)
T ss_dssp             GHHHHHHHHHHH--CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCC
T ss_pred             cHHHHHHHHHhc--cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccc
Confidence            233333322221  478999999999999999999999998887 7899999988766521   1111          11


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECC-------------CCCChHHHHHhhh
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGI-------------DVKTFSDVQNRIL  258 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~-------------~~~~~~el~~~l~  258 (261)
                      ....+|++.....+++.+++++++++||||+ .+|++||+.||+.. .++.             ..+++.|+.+.+.
T Consensus       140 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs-~~Dl~~a~~A~~~~-a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~  214 (226)
T d2feaa1         140 GTCSNQCGCCKPSVIHELSEPNQYIIMIGDS-VTDVEAAKLSDLCF-ARDYLLNECREQNLNHLPYQDFYEIRKEIE  214 (226)
T ss_dssp             TTCCSCCSSCHHHHHHHHCCTTCEEEEEECC-GGGHHHHHTCSEEE-ECHHHHHHHHHTTCCEECCSSHHHHHHHHH
T ss_pred             cccccCCHHHHHHHHHHhcCCCceEEEEeCc-hhhHHHHHHCCEEE-EecchHHHHHHcCCCeeecCCHHHHHHHHH
Confidence            2235677778999999999999999999999 89999999999754 3322             1456777766664

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=3.5e-19  Score=134.05  Aligned_cols=102  Identities=23%  Similarity=0.307  Sum_probs=78.1

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH----------------HHHHHHhcCcccccceEEec-----------CCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR----------------LRKLLKDLNVIDLFDAVVIS-----------SEV  195 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----------------~~~~l~~~gl~~~f~~i~~~-----------~~~  195 (261)
                      +.++||+.++|+.|+++|++++++||.+..                +...+...|+. ..+..++.           ...
T Consensus        26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~cp~~p~~~~~~~~~~~  104 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEEFRQVC  104 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGGGBSCC
T ss_pred             eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccc-ccceeecccccccccccccccc
Confidence            478999999999999999999999997521                11122223332 22233332           224


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeE-EEECCC
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDC-WLWGID  246 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~-i~v~~~  246 (261)
                      ...||+|.++..+++++++++++++||||+ ..|+++|+++|+.+ +++..+
T Consensus       105 ~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs-~~Di~aA~~Ag~~~~~lv~~g  155 (182)
T d2gmwa1         105 DCRKPHPGMLLSARDYLHIDMAASYMVGDK-LEDMQAAVAANVGTKVLVRTG  155 (182)
T ss_dssp             SSSTTSCHHHHHHHHHHTBCGGGCEEEESS-HHHHHHHHHTTCSEEEEESSS
T ss_pred             cccCCccccccchhhhcccccccccccCCC-HHHHHHHHHhCCCcEEEECCC
Confidence            467999999999999999999999999999 79999999999964 667666

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=1.9e-19  Score=142.44  Aligned_cols=95  Identities=22%  Similarity=0.254  Sum_probs=71.1

Q ss_pred             CeEEEEeCCchHHHHH-HHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCe
Q 024886          161 VKVAVVSNFDTRLRKL-LKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGID  239 (261)
Q Consensus       161 ~~i~i~T~~~~~~~~~-l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~  239 (261)
                      ....++++.+...... .....+..+++..+..+....+||+|.+|+.+++++|++|+++++|||++.+||.+|+++||.
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~  216 (250)
T d2c4na1         137 GARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLE  216 (250)
T ss_dssp             TCEEEESCCCSBSSTTCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCE
T ss_pred             cccccccccccccCceeecCcchHHHHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCC
Confidence            3556677655432111 111123445555666666678899999999999999999999999999966799999999999


Q ss_pred             EEEECCCCCChHHHHH
Q 024886          240 CWLWGIDVKTFSDVQN  255 (261)
Q Consensus       240 ~i~v~~~~~~~~el~~  255 (261)
                      +++|.+|..+.+++.+
T Consensus       217 tilV~~G~~~~~~l~~  232 (250)
T d2c4na1         217 TILVLSGVSSLDDIDS  232 (250)
T ss_dssp             EEEESSSSCCGGGGSS
T ss_pred             EEEECCCCCCHHHHHh
Confidence            9999999877776643

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.78  E-value=1.1e-18  Score=138.76  Aligned_cols=60  Identities=22%  Similarity=0.262  Sum_probs=53.2

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                      ...+||+|.+|+.+++++|++|++++||||++.+||.+|+++|+.+++|.+|..+.+++.
T Consensus       181 ~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~  240 (261)
T d1vjra_         181 LIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLE  240 (261)
T ss_dssp             EECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHH
T ss_pred             cccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHh
Confidence            345799999999999999999999999999966799999999999999988866665554

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.76  E-value=2.2e-19  Score=142.35  Aligned_cols=203  Identities=14%  Similarity=0.097  Sum_probs=111.1

Q ss_pred             ccEEEEccCCccccccccHHHHH--HHHHHHhCCCC---------CHHHHHHHHHHHhcCCCccccccCCCChhHHHHHH
Q 024886           50 YDAVLLDAGGTLLQLAEPVEETY--ASIARKYGLNV---------DSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVV  118 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~~~~--~~~~~~~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (261)
                      +|+|+||+||||++....+..+.  .+.+++.|+++         +.+.+...+...++.......... . .......+
T Consensus         2 yk~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~~~i~~-~-~~~~~~~l   79 (253)
T d1wvia_           2 YKGYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLETIYT-A-TLATIDYM   79 (253)
T ss_dssp             CCEEEEECBTTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCGGGEEE-H-HHHHHHHH
T ss_pred             cCEEEEcCcCceEECCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCcccccccccc-H-HHHHHHHH
Confidence            68999999999999877665443  23466667652         455555555444432221111000 0 11111122


Q ss_pred             HHhcCC------CchHHHHHHHHHHhh-C--Cc---e----eeCccHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcC
Q 024886          119 SEATGC------TNDDYFEEVYEYYAK-G--EA---W----HLPHGAYQSILLLKDAGVKVAVVSNFDTRL-RKLLKDLN  181 (261)
Q Consensus       119 ~~~~~~------~~~~~~~~~~~~~~~-~--~~---~----~~~~g~~~~l~~L~~~g~~i~i~T~~~~~~-~~~l~~~g  181 (261)
                      ......      ....+.+.+.+.... .  ..   .    ..++-....+..+..++...+|+||.+... .......+
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~tn~~~~~~~~~~~~~~  159 (253)
T d1wvia_          80 NDMKRGKTAYVIGETGLKKAVAEAGYREDSENPAYVVVGLDTNLTYEKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPG  159 (253)
T ss_dssp             HHHCCCSEEEEESCHHHHHHHHHTTCEECSSSCSEEEECCCTTCBHHHHHHHHHHHHTTCEEEESCCCSEEEETTEEEEC
T ss_pred             HHhccCceeeeccchHHHHHHHHcCCcccccccceEEEecCCCcCHHHHHHHhhhhhhccccccCCCCceeEcCCccccc
Confidence            221111      111222222221110 0  00   0    011222333333444456677888864321 10000111


Q ss_pred             ---cccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHH
Q 024886          182 ---VIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQ  254 (261)
Q Consensus       182 ---l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~  254 (261)
                         +..++......+....+||+|.+|+.+++++|++|++|+||||+..+||++|+++||.+++|.+|..+.+++.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~  235 (253)
T d1wvia_         160 AGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVP  235 (253)
T ss_dssp             HHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGG
T ss_pred             CCcchhcccccccceeEEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHh
Confidence               1222333333444556799999999999999999999999999966799999999999999998876666544

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.74  E-value=1.5e-17  Score=127.27  Aligned_cols=173  Identities=23%  Similarity=0.203  Sum_probs=112.7

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchH
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDD  128 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (261)
                      +.|+|+||+||||+|++     .+..++++.|..   .............        ............ .........
T Consensus         3 kkKlv~FDlDGTL~d~e-----s~~~l~~~~g~~---~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~   65 (210)
T d1j97a_           3 KKKLILFDFDSTLVNNE-----TIDEIAREAGVE---EEVKKITKEAMEG--------KLNFEQSLRKRV-SLLKDLPIE   65 (210)
T ss_dssp             CCCEEEECCCCCCBSSC-----HHHHHHHHTTCH---HHHHHHHHHHHTT--------SSCHHHHHHHHH-HTTTTCBHH
T ss_pred             CCeEEEEeCCCCcCCch-----HHHHHHHHcCCc---HHHHHHHHHHhcc--------cchhHHHHHHHH-HHHhhhHHH
Confidence            56999999999999975     466677777753   2221111111111        011111111111 111111111


Q ss_pred             HHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecC----------CCCC
Q 024886          129 YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISS----------EVGC  197 (261)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~----------~~~~  197 (261)
                      ....   .+..   ..+++++.++++.++.+|..++++|+.... .....+..+...++...+..+          ....
T Consensus        66 ~~~~---~~~~---~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (210)
T d1j97a_          66 KVEK---AIKR---ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLK  139 (210)
T ss_dssp             HHHH---HHHT---CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCS
T ss_pred             HHHH---Hhhh---hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccccccccccccc
Confidence            1111   1111   378899999999999999999999998766 677777777665554443332          2345


Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCC
Q 024886          198 EKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDV  247 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~  247 (261)
                      +++++..+..+++.++++++++++|||+ .+|+.|++.+|++. ++ ++.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~i~iGDs-~nDi~m~~~ag~~v-a~-na~  186 (210)
T d1j97a_         140 ENAKGEILEKIAKIEGINLEDTVAVGDG-ANDISMFKKAGLKI-AF-CAK  186 (210)
T ss_dssp             TTHHHHHHHHHHHHHTCCGGGEEEEESS-GGGHHHHHHCSEEE-EE-SCC
T ss_pred             cccccchhhhHHHHhcccccceEEecCC-cChHHHHHHCCCCE-EE-CCC
Confidence            6777889999999999999999999999 89999999999876 45 453

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=8e-18  Score=130.12  Aligned_cols=171  Identities=14%  Similarity=0.141  Sum_probs=101.3

Q ss_pred             cccEEEEccCCccccccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCccccccCCCChhHHHHHHHHhcCCCchH
Q 024886           49 AYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSEATGCTNDD  128 (261)
Q Consensus        49 ~~k~iifD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (261)
                      ..++|+||+||||++.+     .|.+++...|..-....+....           ........++........ .....+
T Consensus         9 ~~~aV~FD~DGTLi~~e-----~~~~l~~~~g~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~-~~~~~~   71 (217)
T d1nnla_           9 SADAVCFDVDSTVIREE-----GIDELAKICGVEDAVSEMTRRA-----------MGGAVPFKAALTERLALI-QPSREQ   71 (217)
T ss_dssp             HCSEEEEETBTTTBSSC-----HHHHHHHHTTCTTTC-----------------------CHHHHHHHHHHHH-CCCHHH
T ss_pred             CCCEEEEcCccccCCcc-----HHHHHHHHcCChHHHHHHHHHH-----------HcCCCCHHHHHHHHHHhc-ccchHH
Confidence            56889999999999974     4666666777652222111110           001111122222222211 111222


Q ss_pred             HHHHHHHHHhhCCceeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccc--c--------ceEEecCCCC-
Q 024886          129 YFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDL--F--------DAVVISSEVG-  196 (261)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~--f--------~~i~~~~~~~-  196 (261)
                      .    .+..... ...++||+.++++.|+++|++++|+|++... ++.+++.+|++.+  +        ++.+...... 
T Consensus        72 ~----~~~~~~~-~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~  146 (217)
T d1nnla_          72 V----QRLIAEQ-PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQ  146 (217)
T ss_dssp             H----HHHHHHS-CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTS
T ss_pred             H----HHHHHhh-ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeee
Confidence            2    2222222 2478999999999999999999999998887 7999999998643  1        1111110000 


Q ss_pred             ---CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECC
Q 024886          197 ---CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGI  245 (261)
Q Consensus       197 ---~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~  245 (261)
                         ..+.+......+.+.  .+++++++|||+ .+|+.|++.+|.++ .++.
T Consensus       147 p~~~~~~K~~~v~~~~~~--~~~~~~~~vGDs-~~Di~~~~~ag~~v-a~~~  194 (217)
T d1nnla_         147 PTAESGGKGKVIKLLKEK--FHFKKIIMIGDG-ATDMEACPPADAFI-GFGG  194 (217)
T ss_dssp             GGGSTTHHHHHHHHHHHH--HCCSCEEEEESS-HHHHTTTTTSSEEE-EECS
T ss_pred             eeeccchHHHHHHHHHhc--cCccccEEEEeC-HhhHHHHHhCCceE-EECC
Confidence               112234455655554  457899999999 89999999999865 5543

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.71  E-value=9.8e-19  Score=138.50  Aligned_cols=93  Identities=24%  Similarity=0.298  Sum_probs=67.2

Q ss_pred             CCeEEEEeCCchHH---HHHH-HhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHh
Q 024886          160 GVKVAVVSNFDTRL---RKLL-KDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANS  235 (261)
Q Consensus       160 g~~i~i~T~~~~~~---~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~  235 (261)
                      +..+++.+|.+...   ...+ ....+..+++..+..+....+||++.+|+.+++.+|++|++++||||++.+||++|++
T Consensus       137 ~~~~~i~~n~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~  216 (253)
T d1yv9a1         137 KGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQ  216 (253)
T ss_dssp             TTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHH
T ss_pred             cccceeeecCCccccccCceeeecccccccccccccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHH
Confidence            34677888754321   0000 0011233445555556667899999999999999999999999999996679999999


Q ss_pred             CCCeEEEECCCCCChHH
Q 024886          236 LGIDCWLWGIDVKTFSD  252 (261)
Q Consensus       236 ~G~~~i~v~~~~~~~~e  252 (261)
                      +|+.+++|.+|....++
T Consensus       217 aG~~si~V~~G~~~~~~  233 (253)
T d1yv9a1         217 NGIDSLLVTSGFTPKSA  233 (253)
T ss_dssp             HTCEEEEETTSSSCSSS
T ss_pred             CCCCEEEECCCCCCHHH
Confidence            99999999887654433

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.66  E-value=3.3e-17  Score=119.07  Aligned_cols=101  Identities=12%  Similarity=0.082  Sum_probs=73.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcC------cccccceEEecCCCCCCCCCHHHHHHHHHHcC
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLN------VIDLFDAVVISSEVGCEKPDPRIFKAALDQMS  213 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~g------l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~  213 (261)
                      .++||+.++|+.|++.|++|+++||.+..    ....++..+      ....++..+... .+..+|+.......+..+.
T Consensus        36 ~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~k~~~l~~~~  114 (149)
T d1ltqa1          36 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQRE-QGDTRKDDVVKEEIFWKHI  114 (149)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECC-TTCCSCHHHHHHHHHHHHT
T ss_pred             ccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeeccc-ccccCCchHHHHHHHHHhc
Confidence            78999999999999999999999997632    223333321      112234444333 3445667777778888877


Q ss_pred             CCCCcE-EEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          214 VEASRT-VHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       214 ~~~~~~-l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      .++.++ ++|||+ ..|+++|+++|++++.|..|
T Consensus       115 ~~~~~i~~~igD~-~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1         115 APHFDVKLAIDDR-TQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             TTTCEEEEEEECC-HHHHHHHHHTTCCEEECSCC
T ss_pred             cCCCceEEEEcCC-HHHHHHHHHCCCcEEEeCCC
Confidence            666665 678998 89999999999999999776

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=4e-14  Score=107.46  Aligned_cols=113  Identities=17%  Similarity=0.193  Sum_probs=81.2

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCC----CCCCCCCHHHHHHHHHHcCCCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSE----VGCEKPDPRIFKAALDQMSVEAS  217 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~----~~~~Kp~~~~~~~~~~~l~~~~~  217 (261)
                      ....++.......++ .++..+++|.+... .......++....+........    .....+++......++.++++++
T Consensus        68 ~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  146 (206)
T d1rkua_          68 LKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY  146 (206)
T ss_dssp             CCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred             ccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhccccc
Confidence            467788888887765 66899999987776 5777777776554433322221    11223344477889999999999


Q ss_pred             cEEEEcCCchhhhHHHHhCCCeEEEECCC------------CCChHHHHHhhh
Q 024886          218 RTVHIGDDEKADKQGANSLGIDCWLWGID------------VKTFSDVQNRIL  258 (261)
Q Consensus       218 ~~l~iGD~~~~Di~~a~~~G~~~i~v~~~------------~~~~~el~~~l~  258 (261)
                      ++++|||+ .||++|.+.||.+. +++.+            ..+.+|+.+.+.
T Consensus       147 eviaiGDg-~NDi~Ml~~Ag~gI-Amna~~~v~~~~~~~~~~~~~~d~~~~~~  197 (206)
T d1rkua_         147 RVIAAGDS-YNDTTMLSEAHAGI-LFHAPENVIREFPQFPAVHTYEDLKREFL  197 (206)
T ss_dssp             EEEEEECS-STTHHHHHHSSEEE-EESCCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred             ceEEecCC-ccCHHHHHhCCccE-EECCCHHHHHhCCCceeecCHHHHHHHHH
Confidence            99999999 89999999999877 45544            346777776664

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.52  E-value=1.5e-14  Score=120.58  Aligned_cols=102  Identities=21%  Similarity=0.193  Sum_probs=87.3

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccce--EEecC-----------CCCCCCCCHHHHHHHH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDA--VVISS-----------EVGCEKPDPRIFKAAL  209 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~--i~~~~-----------~~~~~Kp~~~~~~~~~  209 (261)
                      .++||+.++|+.|++.|++++++||.+.. +..+++.+|+.++|+.  +++.+           .....||+|..|..++
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~  294 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL  294 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHH
Confidence            35679999999999999999999999887 7999999999999964  44332           2467899999999887


Q ss_pred             HH--------------cCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          210 DQ--------------MSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       210 ~~--------------l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ..              +++++++|+||||+ .+|+.+|+++|+.+|+|..|
T Consensus       295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~-~~D~~aak~Ag~~~Igv~~G  344 (380)
T d1qyia_         295 YGNNRDKYESYINKQDNIVNKDDVFIVGDS-LADLLSAQKIGATFIGTLTG  344 (380)
T ss_dssp             HCCCGGGHHHHHHCCTTCSCTTTEEEEESS-HHHHHHHHHHTCEEEEESCB
T ss_pred             HHcCCCHHHHHHHHHHhCCCCCeEEEECCC-HHHHHHHHHCCCCEEEEecC
Confidence            55              46778999999999 89999999999999998665

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.42  E-value=3.4e-13  Score=100.76  Aligned_cols=95  Identities=21%  Similarity=0.271  Sum_probs=76.7

Q ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCc--------hH-H----HHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHH
Q 024886          145 LPHGAYQSILLLKDAGVKVAVVSNFD--------TR-L----RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQ  211 (261)
Q Consensus       145 ~~~g~~~~l~~L~~~g~~i~i~T~~~--------~~-~----~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~  211 (261)
                      ++|++.+.|+.|.+.|+.++|+||.+        .+ +    ..+++.++..  +...++.......||++.++..++++
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~~  128 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQ  128 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSSSSTTSTHHHHHHHHT
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCccccCCCccHHHHHHHHH
Confidence            46999999999999999999999963        11 2    3445555543  45666666777899999999999999


Q ss_pred             cC----CCCCcEEEEcCCc----------------hhhhHHHHhCCCeEE
Q 024886          212 MS----VEASRTVHIGDDE----------------KADKQGANSLGIDCW  241 (261)
Q Consensus       212 l~----~~~~~~l~iGD~~----------------~~Di~~a~~~G~~~i  241 (261)
                      ++    ++.++++||||..                ..|++.|.++|++..
T Consensus       129 ~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         129 ANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             SSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             hcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            85    8899999999941                389999999999974

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.41  E-value=2.1e-13  Score=105.23  Aligned_cols=59  Identities=12%  Similarity=0.115  Sum_probs=48.3

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHH
Q 024886          195 VGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQN  255 (261)
Q Consensus       195 ~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~  255 (261)
                      .+.+.+++.+++.+++++|++++++++|||+ .||+.|++.+|++ +.|+++.+.+++.++
T Consensus       147 ~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~-~NDi~ml~~ag~~-vav~na~~~~k~~A~  205 (230)
T d1wr8a_         147 KKPWINKGSGIEKASEFLGIKPKEVAHVGDG-ENDLDAFKVVGYK-VAVAQAPKILKENAD  205 (230)
T ss_dssp             ECTTCCHHHHHHHHHHHHTSCGGGEEEEECS-GGGHHHHHHSSEE-EECTTSCHHHHTTCS
T ss_pred             eeCCcCcchhhcccccccccchhheeeeecC-ccHHHHHHHCCeE-EEECCCCHHHHHhCC
Confidence            4456788899999999999999999999999 8999999999975 477777544444333

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.35  E-value=1e-12  Score=101.43  Aligned_cols=58  Identities=12%  Similarity=0.027  Sum_probs=47.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          198 EKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +..+..+++.+++++|++++++++|||+ .||+.|++.+|.+. .|+++.+.+.+.++++
T Consensus       149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs-~nD~~m~~~a~~~v-av~na~~~~k~~ad~v  206 (225)
T d1l6ra_         149 GEDKAFAVNKLKEMYSLEYDEILVIGDS-NNDMPMFQLPVRKA-CPANATDNIKAVSDFV  206 (225)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEECCS-GGGHHHHTSSSEEE-ECTTSCHHHHHHCSEE
T ss_pred             ccchHHHHHHHhhhhccchhheeeecCC-cchHHHHHHCCeEE-EECCCcHHHHHhCCEE
Confidence            3456778999999999999999999999 89999999999654 7877766566555554

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=99.31  E-value=3.5e-12  Score=100.91  Aligned_cols=56  Identities=16%  Similarity=0.221  Sum_probs=46.8

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      .|..+++.+++.++++++++++|||+ .||+.|.+.+|.+. .++++.+.+++.++++
T Consensus       197 ~K~~al~~l~~~~~i~~~~ii~~GD~-~ND~~ml~~~~~~~-am~na~~~lk~~a~~i  252 (271)
T d1rkqa_         197 NKGTGVKSLADVLGIKPEEIMAIGDQ-ENDIAMIEYAGVGV-AVDNAIPSVKEVANFV  252 (271)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEEE-ECTTSCHHHHHHCSEE
T ss_pred             CcccccceehhhcccchhcEEEEeCc-HhHHHHHHhCCcEE-EeCCCCHHHHHhCCEE
Confidence            46678999999999999999999999 89999999999655 7888766666555544

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.28  E-value=6.4e-12  Score=100.06  Aligned_cols=56  Identities=16%  Similarity=0.263  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          200 PDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       200 p~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      .|..+++.+++.+|++++++++|||+ .||+.|.+.+|.++ .|.++.+.+.+.++++
T Consensus       213 ~K~~ai~~l~~~~gi~~~~vi~~GD~-~ND~~Ml~~a~~sv-am~na~~~~k~~A~~v  268 (285)
T d1nrwa_         213 SKGQALKRLAKQLNIPLEETAAVGDS-LNDKSMLEAAGKGV-AMGNAREDIKSIADAV  268 (285)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEESS-GGGHHHHHHSSEEE-ECTTCCHHHHHHCSEE
T ss_pred             hhhhHHHHHHhhcccCcccEEEEeCC-HHHHHHHHhCCeEE-EeCCCCHHHHHhCCEE
Confidence            56788999999999999999999999 89999999999655 8888877676666655

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=99.19  E-value=7.9e-11  Score=92.89  Aligned_cols=60  Identities=10%  Similarity=0.132  Sum_probs=50.5

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          196 GCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       196 ~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +.+-.|..+++.+++.+|++++++++|||+ .||+.|.+.+|.+ +.++++.+.+++.++++
T Consensus       186 ~~~~~K~~ai~~l~~~~~i~~~~vva~GD~-~ND~~ml~~~~~s-va~~na~~~~k~~A~~i  245 (267)
T d1nf2a_         186 PKNVDKGKALRFLRERMNWKKEEIVVFGDN-ENDLFMFEEAGLR-VAMENAIEKVKEASDIV  245 (267)
T ss_dssp             CTTCCHHHHHHHHHHHHTCCGGGEEEEECS-HHHHHHHTTCSEE-EECTTSCHHHHHHCSEE
T ss_pred             CCCCchhHHHHHHHHhhccCcccEEEEcCC-cchHHHHHhCCcE-EEeCCCCHHHHHhCCEE
Confidence            344567779999999999999999999999 8999999999975 58888877666666655

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=99.15  E-value=8.2e-12  Score=92.21  Aligned_cols=88  Identities=26%  Similarity=0.275  Sum_probs=69.7

Q ss_pred             HHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhh
Q 024886          152 SILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDDEKADK  230 (261)
Q Consensus       152 ~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di  230 (261)
                      .+..|+..|+.+.++|..... +....+.+++..    ++.     ..+++...++.+++++|+++++++||||+ .+|+
T Consensus        40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~----~~~-----~~~~K~~~l~~~~~~~~i~~~~v~~vGDd-~nDl  109 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL----FFL-----GKLEKETACFDLMKQAGVTAEQTAYIGDD-SVDL  109 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE----EEE-----SCSCHHHHHHHHHHHHTCCGGGEEEEECS-GGGH
T ss_pred             HHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc----ccc-----ccccHHHHHHHHHHHhcCCcceeEEecCC-ccHH
Confidence            467788899999999997766 677888887643    221     23567778999999999999999999999 8999


Q ss_pred             HHHHhCCCeEEEECCCCCCh
Q 024886          231 QGANSLGIDCWLWGIDVKTF  250 (261)
Q Consensus       231 ~~a~~~G~~~i~v~~~~~~~  250 (261)
                      ++.+.+|++. .+.++...+
T Consensus       110 ~~l~~~g~si-ap~nA~~~v  128 (177)
T d1k1ea_         110 PAFAACGTSF-AVADAPIYV  128 (177)
T ss_dssp             HHHHHSSEEE-ECTTSCHHH
T ss_pred             HHHhhCCeEE-EcCCccHHH
Confidence            9999999766 566663333

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=99.13  E-value=1.7e-10  Score=86.07  Aligned_cols=94  Identities=14%  Similarity=0.093  Sum_probs=66.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHH-HhcCcc--cccceEEecCCCCCCCCCHHHHHHHHHHcCCC
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLL-KDLNVI--DLFDAVVISSEVGCEKPDPRIFKAALDQMSVE  215 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l-~~~gl~--~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~  215 (261)
                      ..+.||+.++++.++++|++|+.+||....    ....| +.+|+.  .....++..+.  ..|..   -...++++++ 
T Consensus        85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~~---rr~~Ik~y~I-  158 (209)
T d2b82a1          85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQNT---KSQWLQDKNI-  158 (209)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCCC---SHHHHHHTTE-
T ss_pred             cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCchH---HHHHHHHcCe-
Confidence            367899999999999999999999997632    23444 457874  22234443332  23333   2223366887 


Q ss_pred             CCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          216 ASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       216 ~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                         ++++||+ .+|+.+|.++|+.+|-+-+.
T Consensus       159 ---~l~~GD~-l~Df~aA~eagi~~iRi~r~  185 (209)
T d2b82a1         159 ---RIFYGDS-DNDITAARDVGARGIRILRA  185 (209)
T ss_dssp             ---EEEEESS-HHHHHHHHHTTCEEEECCCC
T ss_pred             ---EEEecCC-HHHHhHHHHcCCCceEeecc
Confidence               7899999 89999999999999877444

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.08  E-value=8.4e-10  Score=85.24  Aligned_cols=49  Identities=14%  Similarity=0.060  Sum_probs=40.2

Q ss_pred             CCCCHHHHHHHHHHc-CCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCC
Q 024886          198 EKPDPRIFKAALDQM-SVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVK  248 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l-~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~  248 (261)
                      +-.+..+...+++.+ +++++++++|||+ .||++|...+|.+. .|+|+..
T Consensus       177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~-~ND~~Ml~~a~~~v-a~~Na~~  226 (243)
T d1wzca1         177 NSDKGKAAKILLDFYKRLGQIESYAVGDS-YNDFPMFEVVDKVF-IVGSLKH  226 (243)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECS-GGGHHHHTTSSEEE-EESSCCC
T ss_pred             hhccHHHHHHHHHHhcCCCcccEEEEcCC-HhHHHHHHcCCcEE-EeCCCCh
Confidence            344566788999998 4889999999999 89999999999554 7888843

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.06  E-value=7.7e-11  Score=92.61  Aligned_cols=58  Identities=10%  Similarity=0.159  Sum_probs=49.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          198 EKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +-.|..+++.+++++|++++++++|||+ .||+.|.+.+|.. +.|+++.+.+.+.++++
T Consensus       184 ~~sK~~al~~l~~~~~i~~~~~~a~GD~-~ND~~Ml~~a~~s-vav~na~~~lk~~A~~v  241 (260)
T d2rbka1         184 GDTKQKGIDEIIRHFGIKLEETMSFGDG-GNDISMLRHAAIG-VAMGQAKEDVKAAADYV  241 (260)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEE-EECTTSCHHHHHHSSEE
T ss_pred             CCCHHHHHHHHHHhccccHhheeEecCC-cccHHHHHhCCeE-EEeCCCCHHHHHhCCEE
Confidence            3456778999999999999999999999 8999999999975 58888877676666655

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=99.01  E-value=1.5e-09  Score=83.12  Aligned_cols=47  Identities=13%  Similarity=0.038  Sum_probs=36.1

Q ss_pred             CCCCHHHHHHHHH---HcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          198 EKPDPRIFKAALD---QMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       198 ~Kp~~~~~~~~~~---~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +..+....+.+++   .+|++++++++|||+ .||++|.+.+|.+ |+|.+.
T Consensus       182 ~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~-~NDl~Ml~~a~~~-vaV~n~  231 (232)
T d1xvia_         182 SAGKDQAANWIIATYQQLSGKRPTTLGLGDG-PNDAPLLEVMDYA-VIVKGL  231 (232)
T ss_dssp             TCCHHHHHHHHHHHHHHHHSSCCEEEEEESS-GGGHHHHHTSSEE-EECCCC
T ss_pred             CchHHHHHHHHHHHHHHcCCChhcEEEEcCC-HhHHHHHHhCCeE-EEEeCC
Confidence            3344555666665   569999999999999 8999999999974 466553

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=2.2e-09  Score=85.01  Aligned_cols=94  Identities=17%  Similarity=0.099  Sum_probs=64.1

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEec-----CC---------CCCCCCCHHHHHH
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVIS-----SE---------VGCEKPDPRIFKA  207 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~-----~~---------~~~~Kp~~~~~~~  207 (261)
                      +.+.||+.++++.|+++|++++|+|++... ++.+++.+|+...--.+++.     ++         ......+......
T Consensus       134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~  213 (291)
T d2bdua1         134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALK  213 (291)
T ss_dssp             CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHT
T ss_pred             CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhh
Confidence            588999999999999999999999999988 79999999875321133331     11         0011111112222


Q ss_pred             HHH--HcCCCCCcEEEEcCCchhhhHHHHhCC
Q 024886          208 ALD--QMSVEASRTVHIGDDEKADKQGANSLG  237 (261)
Q Consensus       208 ~~~--~l~~~~~~~l~iGD~~~~Di~~a~~~G  237 (261)
                      ...  ...-+..+++++||+ .+|+.||..+.
T Consensus       214 ~~~~~~~~~~~~~vI~iGDs-~~Dl~Ma~g~~  244 (291)
T d2bdua1         214 NTDYFSQLKDNSNIILLGDS-QGDLRMADGVA  244 (291)
T ss_dssp             THHHHHHTTTCCEEEEEESS-SGGGGTTTTCS
T ss_pred             hHHHHhccCCcCcEEEEeCC-HhHHHHHhCCc
Confidence            222  223356889999999 89999998764

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.96  E-value=2.5e-10  Score=89.96  Aligned_cols=59  Identities=12%  Similarity=0.100  Sum_probs=49.2

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      .+-.|..+++.+++.+|++++++++|||+ .||+.|.+.+|.++ .++++.+.+++.++++
T Consensus       187 ~~~sK~~al~~l~~~lgi~~~~vi~~GD~-~ND~~Ml~~ag~~v-am~Na~~~lk~~A~~v  245 (269)
T d1rlma_         187 PGLHKANGISRLLKRWDLSPQNVVAIGDS-GNDAEMLKMARYSF-AMGNAAENIKQIARYA  245 (269)
T ss_dssp             TTCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHCSEEE-ECTTCCHHHHHHCSEE
T ss_pred             CchHHHHHHHHHhhhhccccccEEEEcCC-cchHHHHHhCCeEE-EeCCCCHHHHHhCCEE
Confidence            34457779999999999999999999999 89999999999766 6888866666665554

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=98.95  E-value=1.9e-09  Score=85.07  Aligned_cols=59  Identities=7%  Similarity=0.046  Sum_probs=49.6

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      .+..+...+..+++.++++++++++|||+ .||+.|.+.+|.++ .++++.+.+++.++++
T Consensus       204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~-~ND~~Ml~~a~~~v-a~~na~~~~k~~a~~v  262 (283)
T d2b30a1         204 LGHDKYTGINYLLKHYNISNDQVLVVGDA-ENDIAMLSNFKYSF-AVANATDSAKSHAKCV  262 (283)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHSCSEEE-ECTTCCHHHHHHSSEE
T ss_pred             CcchhHHHHHHHhhhcccccceEEEecCC-hhhHHHHHhCCcEE-EeCCCCHHHHHhCCEE
Confidence            44567779999999999999999999999 89999999999664 7888876666666554

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.81  E-value=4e-08  Score=75.80  Aligned_cols=59  Identities=10%  Similarity=-0.001  Sum_probs=50.0

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      .+..+..+.+.+++.+|++++++++|||+ .||+.|.+.+|.+ +.|+++...+.+.++.+
T Consensus       159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~-~ND~~Ml~~~~~~-vav~na~~~lk~~a~~~  217 (244)
T d1s2oa1         159 QRSNKGNATQYLQQHLAMEPSQTLVCGDS-GNDIGLFETSARG-VIVRNAQPELLHWYDQW  217 (244)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHTSSSEE-EECTTCCHHHHHHHHHH
T ss_pred             CccchhHHHHHHHHhccCChhhEEEEcCC-CCCHHHHhhCCcE-EEeCCCCHHHHHHhhcc
Confidence            44556779999999999999999999999 8999999999954 48888877777777643

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=8.1e-09  Score=79.17  Aligned_cols=57  Identities=5%  Similarity=-0.156  Sum_probs=45.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCcEEEEcCCc---hhhhHHHHhCCCeEEEECCCCCChHHHHHhh
Q 024886          198 EKPDPRIFKAALDQMSVEASRTVHIGDDE---KADKQGANSLGIDCWLWGIDVKTFSDVQNRI  257 (261)
Q Consensus       198 ~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~---~~Di~~a~~~G~~~i~v~~~~~~~~el~~~l  257 (261)
                      +-.|..+++.++   +.+++++++|||+.   .||++|.+.+|..++.|.++.++++.+++++
T Consensus       183 ~vsKg~al~~L~---~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~  242 (244)
T d2fuea1         183 GWDKRYCLDSLD---QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIF  242 (244)
T ss_dssp             TCSTTHHHHHHT---TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHH
T ss_pred             hccHHHHHHHHh---cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhc
Confidence            334445677665   35899999999973   4999999999988889999888888888775

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=98.68  E-value=6.5e-07  Score=74.11  Aligned_cols=104  Identities=16%  Similarity=0.099  Sum_probs=76.9

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHh---------cCcccccceEEecCC-----------------C
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKD---------LNVIDLFDAVVISSE-----------------V  195 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~---------~gl~~~f~~i~~~~~-----------------~  195 (261)
                      +..-|.+..+|+.|+++|.+++++||++-. ....++.         ..|.++||.||+.-.                 .
T Consensus       184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~  263 (458)
T d2bdea1         184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN  263 (458)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTT
T ss_pred             hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCC
Confidence            445688999999999999999999999866 4444432         257789999887521                 0


Q ss_pred             C-------CCCCC---HHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHH-hCCCeEEEECCC
Q 024886          196 G-------CEKPD---PRIFKAALDQMSVEASRTVHIGDDEKADKQGAN-SLGIDCWLWGID  246 (261)
Q Consensus       196 ~-------~~Kp~---~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~-~~G~~~i~v~~~  246 (261)
                      +       ..||.   ......+.+.+|...++++||||+...||-.++ ..||.+++|-..
T Consensus       264 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  325 (458)
T d2bdea1         264 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  325 (458)
T ss_dssp             CCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred             CccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence            0       01111   112577888889999999999999999987775 569999988554

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=3.8e-08  Score=73.46  Aligned_cols=86  Identities=13%  Similarity=0.100  Sum_probs=56.7

Q ss_pred             ceeeCccHHHHHHHHHHCC-CeEEEEeCCchH----H---HHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcC
Q 024886          142 AWHLPHGAYQSILLLKDAG-VKVAVVSNFDTR----L---RKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMS  213 (261)
Q Consensus       142 ~~~~~~g~~~~l~~L~~~g-~~i~i~T~~~~~----~---~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~  213 (261)
                      ..+++||+.++++.|++.| +.+.++|.....    .   ..+|+........+.++.+.+    |.          .++
T Consensus        72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~----K~----------~~~  137 (195)
T d1q92a_          72 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD----KT----------VVS  137 (195)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC----ST----------TSC
T ss_pred             hCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc----cc----------eec
Confidence            4689999999999999865 578888875421    1   345665522222333443322    21          112


Q ss_pred             CCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          214 VEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       214 ~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                        .+  ++|.|+ +.+++.+.++|+.+++.+.+
T Consensus       138 --~d--~lIDD~-p~n~~~~~~~g~~~il~~~~  165 (195)
T d1q92a_         138 --AD--LLIDDR-PDITGAEPTPSWEHVLFTAC  165 (195)
T ss_dssp             --CS--EEEESC-SCCCCSCSSCSSEEEEECCT
T ss_pred             --Ce--EEecCc-HHHHHHHhcCCCeEEEECCC
Confidence              22  789887 79999999999999988543

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=5.4e-08  Score=74.46  Aligned_cols=34  Identities=9%  Similarity=-0.074  Sum_probs=27.7

Q ss_pred             cCCCCCcEEEEcCCc---hhhhHHHHhCCCeEEEECC
Q 024886          212 MSVEASRTVHIGDDE---KADKQGANSLGIDCWLWGI  245 (261)
Q Consensus       212 l~~~~~~~l~iGD~~---~~Di~~a~~~G~~~i~v~~  245 (261)
                      ++++++++++|||+.   .||++|.+.+|..++.|++
T Consensus       194 ~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~  230 (243)
T d2amya1         194 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  230 (243)
T ss_dssp             TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence            477899999999941   6999999999977767755

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.38  E-value=1.2e-06  Score=60.92  Aligned_cols=99  Identities=15%  Similarity=0.200  Sum_probs=68.4

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHI  222 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i  222 (261)
                      ++.|++.+.++.|++.|++++++|+.... ...+-+.+|++.+|    +.       -.|+-.....+.+.-. ..+.|+
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~----~~-------~~p~~k~~~v~~~q~~-~~v~~v   88 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI----AE-------VLPHQKSEEVKKLQAK-EVVAFV   88 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE----CS-------CCHHHHHHHHHHHTTT-SCEEEE
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhc----cc-------cchhHHHHHHHHHHcC-CEEEEE
Confidence            78899999999999999999999987776 68888999985333    21       1233334445555443 578999


Q ss_pred             cCCchhhhHHHHhCCCeEEEECCCCCChHHHHHh
Q 024886          223 GDDEKADKQGANSLGIDCWLWGIDVKTFSDVQNR  256 (261)
Q Consensus       223 GD~~~~Di~~a~~~G~~~i~v~~~~~~~~el~~~  256 (261)
                      ||. .||..+.+.++++. .++++.....+..++
T Consensus        89 GDg-~nD~~aL~~Advgi-a~~~~~~~~~~aADi  120 (135)
T d2b8ea1          89 GDG-INDAPALAQADLGI-AVGSGSDVAVESGDI  120 (135)
T ss_dssp             ECS-SSSHHHHHHSSEEE-EECCC--------SE
T ss_pred             eCC-CCcHHHHHhCCeee-ecCccCHHHHHhCCE
Confidence            999 79999999999875 566664434444433

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.21  E-value=3e-06  Score=63.81  Aligned_cols=55  Identities=11%  Similarity=0.129  Sum_probs=37.5

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCe-EEEECCC-------CCChHHHHHhh
Q 024886          197 CEKPDPRIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGID-CWLWGID-------VKTFSDVQNRI  257 (261)
Q Consensus       197 ~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~-~i~v~~~-------~~~~~el~~~l  257 (261)
                      .+-.+..+++.++++     +++++|||+ .||+.|...+|.+ ++.++++       ..+..|+++.+
T Consensus       156 ~g~~Kg~al~~l~~~-----~~~i~~GDs-~ND~~Mf~~~~~~~av~~g~~~~~A~~~~~~~~ev~~~l  218 (229)
T d1u02a_         156 PGVNKGSAIRSVRGE-----RPAIIAGDD-ATDEAAFEANDDALTIKVGEGETHAKFHVADYIEMRKIL  218 (229)
T ss_dssp             TTCCHHHHHHHHHTT-----SCEEEEESS-HHHHHHHHTTTTSEEEEESSSCCCCSEEESSHHHHHHHH
T ss_pred             CCCCHHHHHHHHhcc-----ccceeecCC-CChHHHHhccCCeEEEEeCCCCccCeEEcCCHHHHHHHH
Confidence            344455566666543     689999999 8999999999765 3455554       33456665554

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=98.09  E-value=6.8e-06  Score=55.74  Aligned_cols=46  Identities=9%  Similarity=0.213  Sum_probs=37.1

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCc---------------hH-HHHHHHhcCcccccceEEe
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFD---------------TR-LRKLLKDLNVIDLFDAVVI  191 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~---------------~~-~~~~l~~~gl~~~f~~i~~  191 (261)
                      .|.+++.+.+..|+++|+.|.+.|+..               .+ ...+|+..|+.  +|.++.
T Consensus        24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~--Yd~Li~   85 (124)
T d1xpja_          24 LPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP--YDEILV   85 (124)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC--CSEEEE
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC--ceEEEE
Confidence            678999999999999999999999863               12 36778888984  576664

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=8.6e-07  Score=65.02  Aligned_cols=93  Identities=6%  Similarity=0.035  Sum_probs=64.3

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVH  221 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  221 (261)
                      +...||+.++|+.+.+. +.++|.|++... +..+++.+.-...+......+.....++.   +..-++.+|-+.+++++
T Consensus        54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~~~~---~~KdL~~l~~~l~~vvi  129 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRGN---YVKDLSRLGRDLRRVLI  129 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEETTE---EECCGGGSCSCGGGEEE
T ss_pred             EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeecCCc---ccccHhhcCCCHHHeEE
Confidence            46799999999999988 999999999988 89999988765556555544332211111   12235677889999999


Q ss_pred             EcCCchhhhHHHHhCCCeE
Q 024886          222 IGDDEKADKQGANSLGIDC  240 (261)
Q Consensus       222 iGD~~~~Di~~a~~~G~~~  240 (261)
                      |.|+ +.-...-...|+..
T Consensus       130 vDd~-~~~~~~~~~N~I~I  147 (181)
T d1ta0a_         130 LDNS-PASYVFHPDNAVPV  147 (181)
T ss_dssp             ECSC-GGGGTTCGGGBCCC
T ss_pred             EcCC-hhhhhcCccCeeEe
Confidence            9665 55554433455544

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.93  E-value=9.3e-06  Score=55.04  Aligned_cols=44  Identities=14%  Similarity=0.038  Sum_probs=35.5

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHhcCcccccceE
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLLKDLNVIDLFDAV  189 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l~~~gl~~~f~~i  189 (261)
                      .|.|++.+.|+.|+++|+.|.+.|+....    ...+|+..|+.  |+.+
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~--yd~i   68 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FYAA   68 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CSEE
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC--ceeh
Confidence            57899999999999999999999998754    25677777774  5554

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.82  E-value=5.9e-05  Score=54.12  Aligned_cols=101  Identities=16%  Similarity=0.195  Sum_probs=69.3

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcccccceE----EecCC----------------CCCCCCCH
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVIDLFDAV----VISSE----------------VGCEKPDP  202 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~~~f~~i----~~~~~----------------~~~~Kp~~  202 (261)
                      ++.|++.++++.|++.|++++++|+.... ...+-+.+|+...-..+    +...+                .-...-.|
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p   99 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP   99 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCH
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccch
Confidence            67899999999999999999999997776 68888899874322111    11000                00112233


Q ss_pred             HHHHHHHHHcCCCCCcEEEEcCCchhhhHHHHhCCCeEEEECCC
Q 024886          203 RIFKAALDQMSVEASRTVHIGDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       203 ~~~~~~~~~l~~~~~~~l~iGD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      +--..+++.++-....+.++||. .||..+.+.+.++. .++++
T Consensus       100 ~~K~~lv~~l~~~g~~Va~vGDG-~nD~~AL~~AdvGI-a~~~g  141 (168)
T d1wpga2         100 SHKSKIVEYLQSYDEITAMTGDG-VNDAPALKKAEIGI-AMGSG  141 (168)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECS-GGGHHHHHHSSEEE-EETTS
T ss_pred             hHHHHHHHHHHhcccceeEEecC-CCCHHHHHhCCEEE-Eeccc
Confidence            33444444444444779999998 89999999999766 55555

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.19  E-value=0.093  Score=38.84  Aligned_cols=40  Identities=20%  Similarity=0.166  Sum_probs=33.6

Q ss_pred             eeeCccHHHHHHHHHHCCCeEEEEeCCchH-HHHHHHhcCcc
Q 024886          143 WHLPHGAYQSILLLKDAGVKVAVVSNFDTR-LRKLLKDLNVI  183 (261)
Q Consensus       143 ~~~~~g~~~~l~~L~~~g~~i~i~T~~~~~-~~~~l~~~gl~  183 (261)
                      ..+.||+.++++.+... .+-+|+|.+..+ ++.+-...|+.
T Consensus        80 ~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp  120 (308)
T d1y8aa1          80 AKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR  120 (308)
T ss_dssp             CCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             eeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC
Confidence            58899999999998776 899999887776 78888888873

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=91.58  E-value=0.18  Score=37.46  Aligned_cols=48  Identities=15%  Similarity=0.137  Sum_probs=36.9

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCch---H-HHHHHHhcCcccccceEEe
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDT---R-LRKLLKDLNVIDLFDAVVI  191 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~---~-~~~~l~~~gl~~~f~~i~~  191 (261)
                      .++|++.++++.|++.|++++++||...   . +...++.+|+.-..+.++.
T Consensus        19 ~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~~~~i~~   70 (250)
T d2c4na1          19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYT   70 (250)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCGGGEEE
T ss_pred             CcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccccceeEec
Confidence            7789999999999999999999998552   2 4566777887644445544

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=88.82  E-value=0.056  Score=43.29  Aligned_cols=20  Identities=20%  Similarity=0.401  Sum_probs=16.7

Q ss_pred             ccEEEEccCCccccccccHH
Q 024886           50 YDAVLLDAGGTLLQLAEPVE   69 (261)
Q Consensus        50 ~k~iifD~DGTL~d~~~~~~   69 (261)
                      +|.|+||+||||++....+-
T Consensus         1 ~~~i~fd~dGVll~~~~~~D   20 (380)
T d1qyia_           1 MKKILFDVDGVFLSEERCFD   20 (380)
T ss_dssp             CCEEEECSBTTTBCSHHHHH
T ss_pred             CceEEEeCCcEEEcceeecc
Confidence            47799999999999876654

>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: ThiG-like
family: ThiG-like
domain: Thiazole biosynthesis protein ThiG
species: Bacillus subtilis [TaxId: 1423]

Probab=86.55  E-value=4.5  Score=29.40  Aligned_cols=97  Identities=23%  Similarity=0.207  Sum_probs=70.4

Q ss_pred             eeCccHHHHH---HHHHHCCCeEEEEeCCchHHHHHHHhcCcccccceEEecC-CCCCCCCCHHHHHHHHHHcCCCCCcE
Q 024886          144 HLPHGAYQSI---LLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISS-EVGCEKPDPRIFKAALDQMSVEASRT  219 (261)
Q Consensus       144 ~~~~g~~~~l---~~L~~~g~~i~i~T~~~~~~~~~l~~~gl~~~f~~i~~~~-~~~~~Kp~~~~~~~~~~~l~~~~~~~  219 (261)
                      .++|+..+++   +.|-+.|+.+..+++.+..+-+.|+..|-....  -.++. ..+.+.-++..++.++++.+++    
T Consensus       106 ~L~PD~~etl~Aae~Lv~eGF~VlpY~~~D~v~ak~Le~~Gc~avM--PlgsPIGSg~Gl~n~~~l~~i~~~~~vP----  179 (251)
T d1xm3a_         106 SLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIM--PGASPIGSGQGILNPLNLSFIIEQAKVP----  179 (251)
T ss_dssp             TCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBE--ECSSSTTCCCCCSCHHHHHHHHHHCSSC----
T ss_pred             CcCCCHHHHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHcCChhHH--HhhhhhhcCCCcCChHHHHHHHhcCCcc----
Confidence            5678777666   566778999999999888887788888743111  11111 2345677899999999998775    


Q ss_pred             EEE--cCCchhhhHHHHhCCCeEEEECCC
Q 024886          220 VHI--GDDEKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       220 l~i--GD~~~~Di~~a~~~G~~~i~v~~~  246 (261)
                      ++|  |=..++|...|-+.|+..|++++.
T Consensus       180 vIvDAGIG~pSdAa~AMElG~daVLvNTA  208 (251)
T d1xm3a_         180 VIVDAGIGSPKDAAYAMELGADGVLLNTA  208 (251)
T ss_dssp             BEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred             EEEecCCCCHHHHHHHHHccCCEEEechh
Confidence            333  222379999999999999999876

>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: PrpR receptor domain-like
family: PrpR receptor domain-like
domain: Propionate catabolism operon regulatory protein PrpR
species: Escherichia coli [TaxId: 562]

Probab=84.80  E-value=0.59  Score=32.99  Aligned_cols=86  Identities=17%  Similarity=0.105  Sum_probs=50.9

Q ss_pred             cHHHHHHHHHHCCCeEEEEeCCc--hHHHHHHHhcCcccccceEEecCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC
Q 024886          148 GAYQSILLLKDAGVKVAVVSNFD--TRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALDQMSVEASRTVHIGDD  225 (261)
Q Consensus       148 g~~~~l~~L~~~g~~i~i~T~~~--~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~iGD~  225 (261)
                      ++.+.|...++.+-++++++...  ..++.+-+.+|++  +.........     +....-.-++.-|++    ++|||.
T Consensus        82 Dil~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~--i~~~~~~~~~-----e~~~~v~~l~~~G~~----vVVG~~  150 (186)
T d2pjua1          82 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLR--LDQRSYITEE-----DARGQINELKANGTE----AVVGAG  150 (186)
T ss_dssp             HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCC--EEEEEESSHH-----HHHHHHHHHHHTTCC----EEEESH
T ss_pred             HHHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCc--eEEEEecCHH-----HHHHHHHHHHHCCCC----EEECCh
Confidence            34455555566678999998543  3367777777764  2222211100     111222233344654    679996


Q ss_pred             chhhhHHHHhCCCeEEEECCC
Q 024886          226 EKADKQGANSLGIDCWLWGID  246 (261)
Q Consensus       226 ~~~Di~~a~~~G~~~i~v~~~  246 (261)
                        .-...|++.|++++++.++
T Consensus       151 --~~~~~A~~~Gl~~vli~S~  169 (186)
T d2pjua1         151 --LITDLAEEAGMTGIFIYSA  169 (186)
T ss_dssp             --HHHHHHHHTTSEEEESSCH
T ss_pred             --HHHHHHHHcCCCEEEEeCH
Confidence              4467899999999988665

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.80  E-value=0.58  Score=34.45  Aligned_cols=48  Identities=13%  Similarity=0.110  Sum_probs=33.0

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCchH----HHHHH-HhcCcccccceEEe
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDTR----LRKLL-KDLNVIDLFDAVVI  191 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~~----~~~~l-~~~gl~~~f~~i~~  191 (261)
                      .++|++.++++.|+++|++++++||+...    +...| ..+|+....+.++.
T Consensus        18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~~~~~i~~   70 (253)
T d1yv9a1          18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYT   70 (253)
T ss_dssp             EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEE
T ss_pred             CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCccccccccC
Confidence            66799999999999999999999985522    22333 34455444455544

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=82.59  E-value=0.69  Score=34.08  Aligned_cols=49  Identities=12%  Similarity=0.203  Sum_probs=34.8

Q ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCch---H-HHHHHH-hcCcccccceEEec
Q 024886          144 HLPHGAYQSILLLKDAGVKVAVVSNFDT---R-LRKLLK-DLNVIDLFDAVVIS  192 (261)
Q Consensus       144 ~~~~g~~~~l~~L~~~g~~i~i~T~~~~---~-~~~~l~-~~gl~~~f~~i~~~  192 (261)
                      .++|++.++++.|++.|++++++||+..   . +...++ .+++....+.++.+
T Consensus        18 ~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~~~i~~~   71 (253)
T d1wvia_          18 DRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLETIYTA   71 (253)
T ss_dssp             EECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCGGGEEEH
T ss_pred             CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCccccccccccH
Confidence            5679999999999999999999998542   2 344443 35665555555543