Citrus Sinensis ID: 024900
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 261 | 2.2.26 [Sep-21-2011] | |||||||
| O05235 | 273 | Uncharacterized hydrolase | yes | no | 0.850 | 0.813 | 0.242 | 2e-11 | |
| Q59695 | 370 | Dihydrolipoyllysine-resid | no | no | 0.816 | 0.575 | 0.234 | 1e-06 | |
| Q6IE26 | 359 | Epoxide hydrolase 4 OS=Mu | no | no | 0.858 | 0.623 | 0.234 | 3e-06 | |
| B4RF90 | 301 | Haloalkane dehalogenase O | yes | no | 0.314 | 0.272 | 0.310 | 3e-06 | |
| Q8IUS5 | 362 | Epoxide hydrolase 4 OS=Ho | yes | no | 0.854 | 0.616 | 0.213 | 3e-06 | |
| B0SY51 | 302 | Haloalkane dehalogenase O | yes | no | 0.306 | 0.264 | 0.329 | 5e-06 | |
| B1KM44 | 256 | Pimelyl-[acyl-carrier pro | yes | no | 0.743 | 0.757 | 0.244 | 7e-06 | |
| Q9A919 | 302 | Haloalkane dehalogenase O | no | no | 0.306 | 0.264 | 0.359 | 1e-05 | |
| B8H3S9 | 302 | Haloalkane dehalogenase O | no | no | 0.306 | 0.264 | 0.359 | 1e-05 | |
| P19076 | 283 | 2-hydroxymuconate semiald | N/A | no | 0.295 | 0.272 | 0.313 | 2e-05 |
| >sp|O05235|YUGF_BACSU Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168) GN=yugF PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 21/243 (8%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+L + + ++DL +G S+K R F YT++ A + + + QA + +S
Sbjct: 49 LLRDKYDIIALDLPPFGQSEKS--RTFI----YTYQNLAKLVIGILEHLQVKQAVLVGHS 102
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG--KL 119
+GG + L AA+ +PE+ ++LL S L RS ++ T L
Sbjct: 103 MGGQISLSAALQKPELFSKVVLLCSS-------------GYLKRSHPTIIFGTHIPYFHL 149
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEE 179
+ K + E V L +D S + EE+++ +P + FI + G L E
Sbjct: 150 YIKRWLSKEGVMKNLLNVVHDKSLIDEEMIDGYGRPFQDEQIFKAMTRFIRHREGDLEPE 209
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239
L ++ P L+ WG++D P+E+G+ L GH +E P L++ +
Sbjct: 210 QLKKMNKPALLIWGEEDRIVPMEIGKRLHADLPNSVLYSLGQTGHLVPEERPELISEHIA 269
Query: 240 SFV 242
F+
Sbjct: 270 DFI 272
|
Bacillus subtilis (strain 168) (taxid: 224308) EC: 3EC: .EC: 1EC: .EC: -EC: .EC: - |
| >sp|Q59695|ACOC_PSEPU Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system OS=Pseudomonas putida GN=acoC PE=3 SV=1 | Back alignment and function description |
|---|
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 34/247 (13%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
LA RV ++DL G+G S K R D+ T L D+ K A +S
Sbjct: 155 ALAAERRVIALDLPGHGESAKALQRGDLDELSETVLALLDHL-----DIAK--AHLAGHS 207
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG V L A + P+ + L+ + I Q G +
Sbjct: 208 MGGAVSLNVAGLAPQRVASLSLIASAGLGEAINGQYLQG--------------------F 247
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF-ICYSGGPLPEEL 180
A +++ + Q + D + VT +++E +L+ G + + + + G
Sbjct: 248 VAAANRNALKPQMVQLFADPALVTRQMLEDMLKFKRLEGVDEALRQLALAIADGDRQRHD 307
Query: 181 LPQV--KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238
L V + P L+ WG KD P ++ + +VLP GH Q EA VN +
Sbjct: 308 LRSVLGQHPALVVWGGKDAIIPA----SHARKGPEAEVLVLPEAGHMVQMEAAEQVNQQM 363
Query: 239 ESFVTRH 245
+F+ +H
Sbjct: 364 LAFLRKH 370
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Pseudomonas putida (taxid: 303) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|Q6IE26|EPHX4_MOUSE Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 23/247 (9%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
+RV ++DL GYG SD P ++ Y + + + D + + I + GG++
Sbjct: 118 YRVVALDLRGYGESDAPAHQE-----SYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMI 172
Query: 67 GLQAAVMEPEICRGMILLNI---SLRMLHIKKQP-------WYGRPLIRSFQNLLRNTAA 116
AV PE+ +I++N S+ +I + P +Y I F + +
Sbjct: 173 AWLIAVCYPEMIMKLIVINFPHPSVFTEYILRHPAQLFRSSFYYFFQIPRFPEFMFSIND 232
Query: 117 GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPL 176
K K + TS+S I + T++ E V QPG +G + + +S PL
Sbjct: 233 FKAL-KHLFTSQST-GIGRKGRQLTTEDLEAYVYVFSQPGALSGPINHYRNI--FSCLPL 288
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVN 235
+ V P L+ WG++D + +E+ + + +L H Q + P +VN
Sbjct: 289 KHHM---VTTPTLLLWGEEDAFMEVEMAEVTKIYVKNYFRLTILSEGSHWLQQDQPDIVN 345
Query: 236 PLVESFV 242
L+ +F+
Sbjct: 346 GLIWAFL 352
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 3 EC: . EC: - EC: . EC: - |
| >sp|B4RF90|DHMA_PHEZH Haloalkane dehalogenase OS=Phenylobacterium zucineum (strain HLK1) GN=dhmA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
++A HR + DL+G+G SDKP D+ YT+ + ++ + + V A+ C
Sbjct: 69 LVAAGHRAIAPDLVGFGRSDKPA-----DRGDYTYARHVAWMSAWLEAVDLRGAYLFCQD 123
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISL 88
GGL+GL+ PE G+++ N L
Sbjct: 124 WGGLIGLRLVAAYPERFAGVVVSNTGL 150
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Phenylobacterium zucineum (strain HLK1) (taxid: 450851) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 99/248 (39%), Gaps = 25/248 (10%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
+RV ++DL GYG +D P R Y + + + D + + I + GG++
Sbjct: 120 YRVVALDLRGYGETDAPIHRQ-----NYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMI 174
Query: 67 GLQAAVMEPEICRGMILLN----------ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA 116
A+ PE+ +I++N I + K +Y I F + +
Sbjct: 175 AWLIAICYPEMVMKLIVINFPHPNVFTEYILRHPAQLLKSSYYYFFQIPWFPEFMFSIND 234
Query: 117 GKLFYKMVAT-SESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGP 175
K+ + + S + CQ T++ E + QPG +G + + +S P
Sbjct: 235 FKVLKHLFTSHSTGIGRKGCQL---TTEDLEAYIYVFSQPGALSGPINHYRNI--FSCLP 289
Query: 176 LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLV 234
L + V P L+ WG+ D + +E+ + + +L H Q + P +V
Sbjct: 290 LKHHM---VTTPTLLLWGENDAFMEVEMAEVTKIYVKNYFRLTILSEASHWLQQDQPDIV 346
Query: 235 NPLVESFV 242
N L+ +F+
Sbjct: 347 NKLIWTFL 354
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 3 EC: . EC: - EC: . EC: - |
| >sp|B0SY51|DHMA_CAUSK Haloalkane dehalogenase OS=Caulobacter sp. (strain K31) GN=dhmA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
A+ HRV + DLIG+G SDKP R YT+E + ++ + + + C G
Sbjct: 71 ARGHRVIAPDLIGFGRSDKPAARG-----DYTYERHVAWMSAWLEGLDLRGLTLFCQDWG 125
Query: 64 GLVGLQAAVMEPEICRGMILLNISL 88
GL+GL+ PE G+++ N L
Sbjct: 126 GLIGLRLVAAFPERFAGLVIANTGL 150
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Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Caulobacter sp. (strain K31) (taxid: 366602) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|B1KM44|BIOH_SHEWM Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 31/225 (13%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIG 63
+RV+ +DL G+G+SD P D L+D+ ++ + A +I S+G
Sbjct: 39 YRVHYVDLPGFGHSD---PID-------------GDLDDWVDAIINQLPNTAIWIGWSLG 82
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRP--LIRSFQNLLRNTAAGKLFY 121
GLV +AA+ PE RG++ + S + + + W G P ++ F L+ GK
Sbjct: 83 GLVATKAALRYPEQVRGLVTIASSPCFMAREDESWPGIPPQVLSQFSTQLQQN-IGKTIE 141
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ +A D Q+ E ++ + L LE I L
Sbjct: 142 RFLAIQVMGS---ATAKEDIKQLKELVLSRPLPKNSALAQGLKMLENIDLRAQ------L 192
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226
PQ++ P L WG D P + N + ++LP H P
Sbjct: 193 PQIEQPWLRVWGRLDGLVPRRVPPLMPNHQAHFTDLLLPKASHAP 237
|
The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Shewanella woodyi (strain ATCC 51908 / MS32) (taxid: 392500) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|Q9A919|DHMA_CAUCR Haloalkane dehalogenase OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=dhmA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPR-DF-FDKPFYTFETWASQLNDFCKDVVKDQAFFIC 59
++AK HRV + DL+G+G SDKP R D+ +++ W Q ND KD+V C
Sbjct: 69 LVAKGHRVVAPDLVGFGRSDKPAKRTDYTYERHVAWMSAWLEQ-NDL-KDIV-----LFC 121
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISL 88
GGL+GL+ PE +++ N L
Sbjct: 122 QDWGGLIGLRLVAAFPERFSAVVVSNTGL 150
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Caulobacter crescentus (strain ATCC 19089 / CB15) (taxid: 190650) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|B8H3S9|DHMA_CAUCN Haloalkane dehalogenase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=dhmA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPR-DF-FDKPFYTFETWASQLNDFCKDVVKDQAFFIC 59
++AK HRV + DL+G+G SDKP R D+ +++ W Q ND KD+V C
Sbjct: 69 LVAKGHRVVAPDLVGFGRSDKPAKRTDYTYERHVAWMSAWLEQ-NDL-KDIV-----LFC 121
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISL 88
GGL+GL+ PE +++ N L
Sbjct: 122 QDWGGLIGLRLVAAFPERFSAVVVSNTGL 150
|
Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Caulobacter crescentus (strain NA1000 / CB15N) (taxid: 565050) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|P19076|DMPD_PSEUF 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas sp. (strain CF600) GN=dmpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LAKS RV + D++G+GYS++P Y + W + +QA + NS
Sbjct: 55 LAKSRRVIAPDMLGFGYSERPADAQ------YNRDVWVDHAVGVLDALEIEQADLVGNSF 108
Query: 63 GGLVGLQAAVMEPEICRGMILLN 85
GG + L A+ PE R ++L+
Sbjct: 109 GGGIALALAIRHPERVRRLVLMG 131
|
Catalyzes the conversion of 2-hydroxymuconate semialdehyde to 2-hydroxypent-2,4-dienoate. Pseudomonas sp. (strain CF600) (taxid: 79676) EC: 3 EC: . EC: 7 EC: . EC: 1 EC: . EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 261 | ||||||
| 225435747 | 365 | PREDICTED: dihydrolipoyllysine-residue a | 0.965 | 0.690 | 0.869 | 1e-129 | |
| 297746468 | 375 | unnamed protein product [Vitis vinifera] | 0.965 | 0.672 | 0.869 | 1e-129 | |
| 224073158 | 404 | predicted protein [Populus trichocarpa] | 0.969 | 0.626 | 0.845 | 1e-128 | |
| 147838658 | 368 | hypothetical protein VITISV_022866 [Viti | 0.938 | 0.665 | 0.845 | 1e-122 | |
| 356567443 | 344 | PREDICTED: dihydrolipoyllysine-residue a | 0.965 | 0.732 | 0.809 | 1e-121 | |
| 357488653 | 351 | Haloalkane dehalogenase [Medicago trunca | 0.934 | 0.695 | 0.831 | 1e-121 | |
| 449463857 | 373 | PREDICTED: epoxide hydrolase 4-like [Cuc | 0.938 | 0.656 | 0.825 | 1e-120 | |
| 449514931 | 258 | PREDICTED: LOW QUALITY PROTEIN: haloalka | 0.950 | 0.961 | 0.823 | 1e-120 | |
| 26450541 | 370 | unknown protein [Arabidopsis thaliana] g | 0.965 | 0.681 | 0.777 | 1e-118 | |
| 18420047 | 359 | hydrolase, alpha/beta fold family protei | 0.934 | 0.679 | 0.795 | 1e-117 |
| >gi|225435747|ref|XP_002283601.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/252 (86%), Positives = 237/252 (94%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLAKSHRVYSIDLIGYGYSDKPNPR+F FYTFETWA+QLNDFC DVVKD+AFFICNS
Sbjct: 113 VLAKSHRVYSIDLIGYGYSDKPNPRNFGADYFYTFETWATQLNDFCTDVVKDEAFFICNS 172
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAVMEP+IC+G++LLNISLRMLHIKKQPWYG+P+IRSFQNLLRNTA G+ FY
Sbjct: 173 IGGLVGLQAAVMEPQICKGIMLLNISLRMLHIKKQPWYGKPVIRSFQNLLRNTAMGRFFY 232
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ VAT ESV++ILCQCY+DTSQVTEELV+KIL PGLE GA DVFLEFICYSGGPLPEELL
Sbjct: 233 RSVATPESVKSILCQCYHDTSQVTEELVQKILLPGLEPGAVDVFLEFICYSGGPLPEELL 292
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
PQVKCPVLIAWGDKDPWEPIELGRAYG FDSVEDFIVLP+VGHCPQDEAP+LVNPLVESF
Sbjct: 293 PQVKCPVLIAWGDKDPWEPIELGRAYGKFDSVEDFIVLPDVGHCPQDEAPNLVNPLVESF 352
Query: 242 VTRHATPPASVS 253
V RHA+P ASVS
Sbjct: 353 VARHASPKASVS 364
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297746468|emb|CBI16524.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/252 (86%), Positives = 237/252 (94%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLAKSHRVYSIDLIGYGYSDKPNPR+F FYTFETWA+QLNDFC DVVKD+AFFICNS
Sbjct: 123 VLAKSHRVYSIDLIGYGYSDKPNPRNFGADYFYTFETWATQLNDFCTDVVKDEAFFICNS 182
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAVMEP+IC+G++LLNISLRMLHIKKQPWYG+P+IRSFQNLLRNTA G+ FY
Sbjct: 183 IGGLVGLQAAVMEPQICKGIMLLNISLRMLHIKKQPWYGKPVIRSFQNLLRNTAMGRFFY 242
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ VAT ESV++ILCQCY+DTSQVTEELV+KIL PGLE GA DVFLEFICYSGGPLPEELL
Sbjct: 243 RSVATPESVKSILCQCYHDTSQVTEELVQKILLPGLEPGAVDVFLEFICYSGGPLPEELL 302
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
PQVKCPVLIAWGDKDPWEPIELGRAYG FDSVEDFIVLP+VGHCPQDEAP+LVNPLVESF
Sbjct: 303 PQVKCPVLIAWGDKDPWEPIELGRAYGKFDSVEDFIVLPDVGHCPQDEAPNLVNPLVESF 362
Query: 242 VTRHATPPASVS 253
V RHA+P ASVS
Sbjct: 363 VARHASPKASVS 374
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224073158|ref|XP_002304000.1| predicted protein [Populus trichocarpa] gi|222841432|gb|EEE78979.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust.
Identities = 214/253 (84%), Positives = 237/253 (93%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLAKSHRVYSIDLIGYGYSDKPNPR+F DK FYTFETWA+QLNDFC DVVKD+AFFICNS
Sbjct: 150 VLAKSHRVYSIDLIGYGYSDKPNPREFGDKSFYTFETWATQLNDFCVDVVKDEAFFICNS 209
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGG+VGLQAAV++ +IC+G++LLNISLR+LHIKKQPW+GRP IRSFQ+LLRNTA GK F+
Sbjct: 210 IGGVVGLQAAVIDSQICKGIMLLNISLRLLHIKKQPWFGRPFIRSFQSLLRNTALGKSFF 269
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K+VA+SESVR+ILCQCY+DTSQVTEELV+KIL PGLE GAADVFLEFICYSGGPLPEELL
Sbjct: 270 KLVASSESVRSILCQCYHDTSQVTEELVQKILLPGLEPGAADVFLEFICYSGGPLPEELL 329
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
PQVKCPVLI WGDKDPWEPIELGR + NFD+VEDF+ LPNVGHCPQDEAPHLVNPLVESF
Sbjct: 330 PQVKCPVLIVWGDKDPWEPIELGRGFINFDTVEDFVTLPNVGHCPQDEAPHLVNPLVESF 389
Query: 242 VTRHATPPASVSA 254
V RH+TP ASVS
Sbjct: 390 VARHSTPAASVST 402
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147838658|emb|CAN65051.1| hypothetical protein VITISV_022866 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/252 (84%), Positives = 230/252 (91%), Gaps = 7/252 (2%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLAKSHRVYSIDLIGYGYSDKPNPR+F FYTFETWA+QLNDFC DVVKD+AFFICNS
Sbjct: 123 VLAKSHRVYSIDLIGYGYSDKPNPRNFGADYFYTFETWATQLNDFCTDVVKDEAFFICNS 182
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAVMEP+IC+G++LLNISLRMLHIKKQPWYG+P+IRSFQNLLRNTA G+ FY
Sbjct: 183 IGGLVGLQAAVMEPQICKGIMLLNISLRMLHIKKQPWYGKPVIRSFQNLLRNTAMGRFFY 242
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ VAT ESV++ILC QVTEELV+KIL PGLE GA DVFLEFICYSGGPLPEELL
Sbjct: 243 RSVATPESVKSILC-------QVTEELVQKILLPGLEPGAVDVFLEFICYSGGPLPEELL 295
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
PQVKCPVLIAWGDKDPWEPIELGRAYG FDSVEDFIVLP+VGHCPQDEAP+LVNPLVESF
Sbjct: 296 PQVKCPVLIAWGDKDPWEPIELGRAYGKFDSVEDFIVLPDVGHCPQDEAPNLVNPLVESF 355
Query: 242 VTRHATPPASVS 253
V RHA+P ASVS
Sbjct: 356 VARHASPKASVS 367
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567443|ref|XP_003551929.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/252 (80%), Positives = 225/252 (89%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLA+SHRVYSIDLIGYGYSDKPNPR D FYTFETWA+QLN+FC DV+KD+AFFICNS
Sbjct: 91 VLAQSHRVYSIDLIGYGYSDKPNPRQIGDHSFYTFETWATQLNEFCLDVIKDEAFFICNS 150
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGG+VGLQAAV+ P IC+G+ILLNISLRMLHIKKQPWYG+P IRS Q LLR+T GK F+
Sbjct: 151 IGGVVGLQAAVLAPHICQGIILLNISLRMLHIKKQPWYGKPFIRSLQRLLRDTDVGKFFF 210
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K +AT ESVRNILCQCY+DTS+VT+ELV+ IL PGLE GAA+VFLEFICYSGGPLPEELL
Sbjct: 211 KTIATKESVRNILCQCYHDTSKVTDELVQIILGPGLEPGAAEVFLEFICYSGGPLPEELL 270
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
PQVKCP+LIAWGDKDPWEPI++GR Y NFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF
Sbjct: 271 PQVKCPILIAWGDKDPWEPIDIGRNYENFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 330
Query: 242 VTRHATPPASVS 253
V RHA S S
Sbjct: 331 VARHAKSSTSTS 342
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357488653|ref|XP_003614614.1| Haloalkane dehalogenase [Medicago truncatula] gi|355515949|gb|AES97572.1| Haloalkane dehalogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/244 (83%), Positives = 222/244 (90%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LAKSHRVYSIDLIGYGYSDKPNPR D FYTF+TWA+QLN+FC DVVKD+AFFICNSI
Sbjct: 98 LAKSHRVYSIDLIGYGYSDKPNPRQIGDDSFYTFDTWAAQLNEFCLDVVKDEAFFICNSI 157
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG+VGLQAA+ EP+IC+G++LLNISLRMLHIKKQPW+ RP I SFQ LLR+T+ GK F+K
Sbjct: 158 GGVVGLQAAITEPQICKGILLLNISLRMLHIKKQPWFARPFISSFQRLLRDTSVGKFFFK 217
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
VAT ESV+NILCQCY+DTSQVT+ELV+ IL PGLE GA DVFLEFICYSGGPLPEELLP
Sbjct: 218 AVATKESVKNILCQCYHDTSQVTDELVQLILSPGLEPGAVDVFLEFICYSGGPLPEELLP 277
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242
QVKCPVLIAWGDKDPWEPIE+GR YGNFDSVEDFIVLPNVGHCPQDEAP LVNPLVESFV
Sbjct: 278 QVKCPVLIAWGDKDPWEPIEMGRNYGNFDSVEDFIVLPNVGHCPQDEAPQLVNPLVESFV 337
Query: 243 TRHA 246
RHA
Sbjct: 338 ARHA 341
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449463857|ref|XP_004149647.1| PREDICTED: epoxide hydrolase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/246 (82%), Positives = 228/246 (92%), Gaps = 1/246 (0%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLA+SHRVY+IDLIGYGYSDKPNP D + FYTFETWASQLNDFC DVV+D AFFICNS
Sbjct: 124 VLAQSHRVYAIDLIGYGYSDKPNP-DLVGEGFYTFETWASQLNDFCVDVVQDNAFFICNS 182
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGG+VGLQAA+M+P+IC+G++LLNISLRMLHIKKQPWYG+P IRSFQNLLRNTA GK F+
Sbjct: 183 IGGVVGLQAAIMKPQICKGIVLLNISLRMLHIKKQPWYGKPFIRSFQNLLRNTALGKYFF 242
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ VAT ESV+NILCQCY+DTSQVT+ELV+ IL PGL+ GAAD+FLEFICYSGGPLPEELL
Sbjct: 243 RAVATPESVKNILCQCYHDTSQVTDELVQIILNPGLQPGAADIFLEFICYSGGPLPEELL 302
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
P+VKCPVLIAWGDKDPWEPIELGR Y +FDSVE+F+VLPNVGHCPQDEAPHLVNPLVESF
Sbjct: 303 PRVKCPVLIAWGDKDPWEPIELGRNYASFDSVEEFVVLPNVGHCPQDEAPHLVNPLVESF 362
Query: 242 VTRHAT 247
V+ HAT
Sbjct: 363 VSGHAT 368
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449514931|ref|XP_004164518.1| PREDICTED: LOW QUALITY PROTEIN: haloalkane dehalogenase-like, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/249 (82%), Positives = 230/249 (92%), Gaps = 1/249 (0%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLA+SHRVY+IDLIGYGYSDKPNP D + FYTFETWASQLNDFC DVV+D AFFICNS
Sbjct: 9 VLAQSHRVYAIDLIGYGYSDKPNP-DLVGEGFYTFETWASQLNDFCVDVVQDNAFFICNS 67
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGG+VGLQAA+M+P+IC+G++LLNISLRMLHIKKQPWYG+P IRSFQNLLRNTA GKLF+
Sbjct: 68 IGGVVGLQAAIMKPQICKGIVLLNISLRMLHIKKQPWYGKPFIRSFQNLLRNTALGKLFF 127
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ VAT ESV+NILCQCY+DTSQVT+ELV+ IL PGL+ GAAD+FLEFICYSGGPLPEELL
Sbjct: 128 RAVATPESVKNILCQCYHDTSQVTDELVQIILNPGLQPGAADIFLEFICYSGGPLPEELL 187
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
P+VKCPVLIAWGDKDPWEPIELGR Y +FDSVE+F+VLPNVGHCPQDEAPHLVNPLVESF
Sbjct: 188 PRVKCPVLIAWGDKDPWEPIELGRNYASFDSVEEFVVLPNVGHCPQDEAPHLVNPLVESF 247
Query: 242 VTRHATPPA 250
V+ HAT A
Sbjct: 248 VSGHATRSA 256
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|26450541|dbj|BAC42383.1| unknown protein [Arabidopsis thaliana] gi|28950929|gb|AAO63388.1| At5g19850 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 196/252 (77%), Positives = 224/252 (88%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+L K+HRVYSIDLIGYGYSDKPNPR+F +PFYTFETW QLNDFC DVVKD+AFFICNS
Sbjct: 116 ILGKTHRVYSIDLIGYGYSDKPNPREFGGEPFYTFETWGEQLNDFCLDVVKDEAFFICNS 175
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAV +PEICRG++L+NISLRMLHIKKQP+ GRP I+SFQNLLRNT GKLF+
Sbjct: 176 IGGLVGLQAAVSKPEICRGLMLINISLRMLHIKKQPFIGRPFIKSFQNLLRNTPVGKLFF 235
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K +A E+V++ILCQCY+D+SQVT+ELVE IL+PGLE GA DVFLEFICYSGGPLPE+LL
Sbjct: 236 KSIAKPETVKSILCQCYHDSSQVTDELVETILRPGLEPGAVDVFLEFICYSGGPLPEDLL 295
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
P VKCPVLIAWG+KDPWEPIELGRAY NFD+VEDF+VLP+ GHCPQDE P +VNPL+ESF
Sbjct: 296 PLVKCPVLIAWGEKDPWEPIELGRAYSNFDAVEDFVVLPDAGHCPQDEKPEMVNPLIESF 355
Query: 242 VTRHATPPASVS 253
V RH S+S
Sbjct: 356 VARHRKSNTSIS 367
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18420047|ref|NP_568381.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gi|332005373|gb|AED92756.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/244 (79%), Positives = 221/244 (90%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+L K+HRVYSIDLIGYGYSDKPNPR+F +PFYTFETW QLNDFC DVVKD+AFFICNS
Sbjct: 116 ILGKTHRVYSIDLIGYGYSDKPNPREFGGEPFYTFETWGEQLNDFCLDVVKDEAFFICNS 175
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAV +PEICRG++L+NISLRMLHIKKQP+ GRP I+SFQNLLRNT GKLF+
Sbjct: 176 IGGLVGLQAAVSKPEICRGLMLINISLRMLHIKKQPFIGRPFIKSFQNLLRNTPVGKLFF 235
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K +A E+V++ILCQCY+D+SQVT+ELVE IL+PGLE GA DVFLEFICYSGGPLPE+LL
Sbjct: 236 KSIAKPETVKSILCQCYHDSSQVTDELVEAILRPGLEPGAVDVFLEFICYSGGPLPEDLL 295
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
P VKCPVLIAWG+KDPWEPIELGRAY NFD+VEDF+VLP+ GHCPQDE P +VNPL+ESF
Sbjct: 296 PLVKCPVLIAWGEKDPWEPIELGRAYSNFDAVEDFVVLPDAGHCPQDEKPEMVNPLIESF 355
Query: 242 VTRH 245
V RH
Sbjct: 356 VARH 359
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 261 | ||||||
| TAIR|locus:2832896 | 359 | AT5G19850 [Arabidopsis thalian | 0.934 | 0.679 | 0.795 | 1.8e-110 | |
| TAIR|locus:2159823 | 374 | AT5G38520 [Arabidopsis thalian | 0.869 | 0.606 | 0.337 | 9.1e-29 | |
| TAIR|locus:2115440 | 378 | AT4G36530 [Arabidopsis thalian | 0.919 | 0.634 | 0.307 | 9.4e-27 | |
| TAIR|locus:2159033 | 484 | PPH "AT5G13800" [Arabidopsis t | 0.839 | 0.452 | 0.257 | 1.5e-16 | |
| TAIR|locus:2122654 | 692 | AT4G25290 [Arabidopsis thalian | 0.931 | 0.351 | 0.261 | 1.2e-10 | |
| ZFIN|ZDB-GENE-080227-1 | 370 | ephx4 "epoxide hydrolase 4" [D | 0.854 | 0.602 | 0.247 | 5e-09 | |
| TIGR_CMR|CPS_2154 | 308 | CPS_2154 "hydrolase, alpha/bet | 0.877 | 0.743 | 0.266 | 2.9e-08 | |
| TAIR|locus:2135843 | 393 | AT4G12830 [Arabidopsis thalian | 0.873 | 0.580 | 0.232 | 9.2e-08 | |
| UNIPROTKB|Q882F4 | 282 | PSPTO_2674 "3-oxoadipate enol- | 0.291 | 0.269 | 0.325 | 1.9e-07 | |
| UNIPROTKB|Q48IM0 | 282 | catD3 "3-oxoadipate enol-lacto | 0.291 | 0.269 | 0.313 | 2.6e-07 |
| TAIR|locus:2832896 AT5G19850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1091 (389.1 bits), Expect = 1.8e-110, P = 1.8e-110
Identities = 194/244 (79%), Positives = 221/244 (90%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+L K+HRVYSIDLIGYGYSDKPNPR+F +PFYTFETW QLNDFC DVVKD+AFFICNS
Sbjct: 116 ILGKTHRVYSIDLIGYGYSDKPNPREFGGEPFYTFETWGEQLNDFCLDVVKDEAFFICNS 175
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAV +PEICRG++L+NISLRMLHIKKQP+ GRP I+SFQNLLRNT GKLF+
Sbjct: 176 IGGLVGLQAAVSKPEICRGLMLINISLRMLHIKKQPFIGRPFIKSFQNLLRNTPVGKLFF 235
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K +A E+V++ILCQCY+D+SQVT+ELVE IL+PGLE GA DVFLEFICYSGGPLPE+LL
Sbjct: 236 KSIAKPETVKSILCQCYHDSSQVTDELVEAILRPGLEPGAVDVFLEFICYSGGPLPEDLL 295
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
P VKCPVLIAWG+KDPWEPIELGRAY NFD+VEDF+VLP+ GHCPQDE P +VNPL+ESF
Sbjct: 296 PLVKCPVLIAWGEKDPWEPIELGRAYSNFDAVEDFVVLPDAGHCPQDEKPEMVNPLIESF 355
Query: 242 VTRH 245
V RH
Sbjct: 356 VARH 359
|
|
| TAIR|locus:2159823 AT5G38520 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 86/255 (33%), Positives = 134/255 (52%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+K+H VY+IDL+G+G SDKP P F YT E+WA + +F ++VV+ I NS+
Sbjct: 113 LSKNHTVYAIDLLGFGASDKP-PG--FS---YTMESWAELILNFLEEVVQKPTILIGNSV 166
Query: 63 GGLVGLQAA-------VMEP------EICRGMILLNISLRMLHIKK-QPWYGR---PLIR 105
G L + AA +E ++ +G++LLN + M + W + PL+
Sbjct: 167 GSLACVIAASGTKFLIYLEKKTESRGDLVKGLVLLNCAGGMNNKAVFDDWRIKLLMPLLL 226
Query: 106 SFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVF 165
LL+ + V E+++NIL Y + V + LVE I P GA D F
Sbjct: 227 LIDFLLKQRGIASALFNRVKDRENLKNILTNVYGNKDNVDDTLVEIIAGPANTEGALDAF 286
Query: 166 LEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNF-DSVEDF--IVLP 220
+ + GP P +L+P++ PVL+ WGD+D P++ +G+ + + D + +F VL
Sbjct: 287 VSILTGPPGPNPIKLIPEITKPVLVLWGDQDGLTPLDGPVGKYFTSLPDQLPNFNLYVLQ 346
Query: 221 NVGHCPQDEAPHLVN 235
VGHCPQD+ P LV+
Sbjct: 347 GVGHCPQDDRPDLVH 361
|
|
| TAIR|locus:2115440 AT4G36530 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 80/260 (30%), Positives = 128/260 (49%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LAK ++VY++DL+G+G+SDK + Y W Q+ DF K+VVK+ A + NS+
Sbjct: 122 LAKKYKVYALDLLGFGWSDKA----LIE---YDAMVWTDQVIDFMKEVVKEPAVVVGNSL 174
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRML-HIKKQPWYGRPLIRSF-----QNLLRNTAA 116
GG L AV PE G+ LLN + + +K+ +I F + + +
Sbjct: 175 GGFTALSVAVGLPEQVTGVALLNSAGQFAAESRKREEADETVITKFIVKPLKEIFQRVVL 234
Query: 117 GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLE----FICYS 172
G LF++ S + ++L Y D++ V + LVE I +P + A +V+ F+
Sbjct: 235 GFLFWQAKQPSR-IESVLKSVYIDSTNVDDYLVESISKPATDPNAGEVYYRLMTRFLTNQ 293
Query: 173 GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232
+ +L ++ CP+L+ WGD DPW F S + L GHCP DE P
Sbjct: 294 SRYTLDSVLSKMTCPLLLVWGDLDPWVGPAKAEKIKAFYSNSSLVHL-QAGHCPHDEVPE 352
Query: 233 LVNPLVESFVTRH-ATPPAS 251
VN + +++ + A+ PAS
Sbjct: 353 AVNKALLDWLSINIASKPAS 372
|
|
| TAIR|locus:2159033 PPH "AT5G13800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 212 (79.7 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 63/245 (25%), Positives = 114/245 (46%)
Query: 17 YGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76
+G+ DK P + D+ ++ + W Q+ F ++V+ + + NS+GG V L A P
Sbjct: 179 WGFGDKTEP--WADQLVFSLDLWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPH 236
Query: 77 ICRGMILLNIS---------LRMLHIKKQ-PWYGR-PLIRSFQNLLRNTAAGKLFYKMVA 125
+ +G+ LLN + +R + + PW G PL + + +L ++ ++
Sbjct: 237 LVKGVTLLNATPFWGFFPNPVRSPKLARLFPWPGAFPLPERVKKIT------ELVWQKIS 290
Query: 126 TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP-EELLPQV 184
ES+ IL Q Y D S +++ +I++ AA F + GG L E L +
Sbjct: 291 DPESIAEILKQVYTDHSINVDKVFSRIVEVTQHPAAAASFASIMLAPGGELSFSEALSRC 350
Query: 185 K---CPVLIAWGDKDPW-EPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240
K + + +G +DPW P+ + + + + P GHCP DE P +VN L+
Sbjct: 351 KENNVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISP-AGHCPHDEVPEVVNYLMRG 409
Query: 241 FVTRH 245
++ +H
Sbjct: 410 WI-KH 413
|
|
| TAIR|locus:2122654 AT4G25290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 173 (66.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 70/268 (26%), Positives = 120/268 (44%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
++ +RV++I ++G+G S+KPN YT WA L DF +VV + A + NS
Sbjct: 439 IVNSKNRVWTITVLGFGKSEKPNI-------IYTELLWAELLRDFMAEVVGEPAHCVGNS 491
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGR-PLIRSFQNLLRNTAAGKLF 120
IGG A + P + + ++L+N + ++ P Y P+ R + +L
Sbjct: 492 IGGYFVALMAFLWPALVKSVVLVNSAGNVV-----PGYSPLPISRERRVPFGAQFGSRLL 546
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEE-LVEKILQPGLETGAADVFLEFICYSGGPLP-E 178
+ + V+ +L CY + ++ LV ++L+ + G V LE I LP
Sbjct: 547 LFFLQLN--VKKLLKDCYPVKPERADDFLVTEMLRASRDPGVVMV-LESIFGFDLSLPLN 603
Query: 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNV--GHCPQDEAPHLVNP 236
LL + L+ G +DP + + + +V+ V GHCP DE VNP
Sbjct: 604 YLLKGFEEKTLVIQGMEDPISDPQ--KKVALLKELCPAMVIKKVKAGHCPHDEISEEVNP 661
Query: 237 LVESFVTRHATPPASVSAAS---LYSSN 261
++ ++ + + A+S LY SN
Sbjct: 662 IICEWIVKVTNDDRELKASSSQQLYHSN 689
|
|
| ZFIN|ZDB-GENE-080227-1 ephx4 "epoxide hydrolase 4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 156 (60.0 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 61/246 (24%), Positives = 112/246 (45%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVG 67
RV ++D+ GYG SD P+ + Y + + + D + + ++ F + + GG++
Sbjct: 125 RVVAVDMRGYGESDLPSSTES-----YRLDYLVTDIKDIVEYLGYNRCFLVGHDWGGIIA 179
Query: 68 LQAAVMEPEICRGMILLN---------ISLRM-LHIKKQPWYGRPLIRSFQNLLRNTAAG 117
A+ PE+ +I+LN +LR + K +Y + F L+ +
Sbjct: 180 WLCAIHYPEMVTKLIVLNSPHPCVFTDYALRHPSQMLKSSYYFFFQLPYFPELMLSINDF 239
Query: 118 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP 177
K K + TS S I C+ T++ E + + QPG TGA + F +S PL
Sbjct: 240 KAL-KSLFTSRST-GISCKGRWLTTEDLEAYLYALSQPGALTGALNYFRNV--FSVLPLS 295
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNP 236
+VK PVL+ WG++D + ++ A + ++ ++ H Q + P +VN
Sbjct: 296 HS---EVKSPVLLLWGERDAFLEQDMAEACRLYIRNLFRLNIISGASHWLQQDQPDIVNK 352
Query: 237 LVESFV 242
L+ +F+
Sbjct: 353 LIWTFI 358
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| TIGR_CMR|CPS_2154 CPS_2154 "hydrolase, alpha/beta hydrolase fold family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 148 (57.2 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 69/259 (26%), Positives = 113/259 (43%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNS 61
L+KSH+ D IG G SDKP+ D +D YT L + + VK+ + +
Sbjct: 63 LSKSHQCIVPDHIGCGLSDKPDD-DGYD---YTLANRIDDLEALLEHLDVKENITLVVHD 118
Query: 62 IGGLVGLQAAVMEPEICRGMILLNI-SLRMLHIKKQP---WYGR------PLIRSFQNLL 111
GG++G+ A PE + +++LN + + KK P W GR L+R F
Sbjct: 119 WGGMIGMGYAARHPERIKRLVILNTGAFHLPKAKKLPPALWLGRNTFVGAALVRGFNAF- 177
Query: 112 RNTAAGKLFYKMVATSESVRNILCQCYND-TSQV-TEELVEKILQPGLETGAADVFLEFI 169
++ A + K S+ VR +N T+++ T ++ I P L+ G D + +
Sbjct: 178 -SSVASYIGVKRKPMSKEVREAYVAPFNSWTNRISTLRFIQDI--P-LKIG--DRNYQLV 231
Query: 170 CYSGGPLPEELLPQVKCPVLIAWGDKD-PWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228
+ + L K P+LI WG KD ++ L F + + GH +
Sbjct: 232 ----SDISDNLAQFKKIPMLICWGLKDFVFDRHFLDEWQHRFPDAQVH-AFDDCGHYILE 286
Query: 229 EAPHLVNPLVESFVTRHAT 247
+A V PL+E+F+ T
Sbjct: 287 DASDEVVPLIENFLKTSET 305
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| TAIR|locus:2135843 AT4G12830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 146 (56.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 59/254 (23%), Positives = 106/254 (41%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VL+K++R + D +G+G+SDKP F+ YT + + S L F +V + +
Sbjct: 155 VLSKNYRAIAFDWLGFGFSDKPQAGYGFN---YTMDEFVSSLESFIDEVTTSKVSLVVQG 211
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
++ A P+ + +ILLN L H K P + F N L G++F
Sbjct: 212 YFSAAVVKYARNRPDKIKNLILLNPPLTPEHAKL-P----STLSVFSNFL----LGEIFS 262
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGP----LP 177
+ + C Y + + +V + +P L +G++ L I S
Sbjct: 263 QDPLRASDKPLTSCGPYK--MKEDDAMVYR--RPYLTSGSSGFALNAISRSMKKELKKYA 318
Query: 178 EELLPQV-----KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232
EE+ + K P+ + WG +D W E + S + + LPN GH Q++
Sbjct: 319 EEMRTSLMDKNWKIPITVCWGQRDRWLSYEGVEEFCK-SSGHNLVELPNAGHHVQEDCGE 377
Query: 233 LVNPLVESFVTRHA 246
+ ++ +++ A
Sbjct: 378 ELGGIISRIISKSA 391
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| UNIPROTKB|Q882F4 PSPTO_2674 "3-oxoadipate enol-lactone hydrolase family protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 99 (39.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA +RV + D++G+G S +P+P P Y A QL + + QA + S+
Sbjct: 44 LAPRYRVIAYDMLGHGASPRPDPDTGL--PGY-----AEQLRELLAHLGVPQASVVGFSM 96
Query: 63 GGLVGLQAAVMEPEICRGMILLN 85
GGLV A+ P++ G+++LN
Sbjct: 97 GGLVARAFALQFPQLLSGLVILN 119
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| UNIPROTKB|Q48IM0 catD3 "3-oxoadipate enol-lactonase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 98 (39.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA +++V + D++G+G S +P+P P Y A QL + + + QA + S+
Sbjct: 44 LATNYQVIAYDMLGHGASPRPDPDTGL--PGY-----AEQLRELLEHLQLPQATVVGFSM 96
Query: 63 GGLVGLQAAVMEPEICRGMILLN 85
GGLV A+ P++ G+++LN
Sbjct: 97 GGLVARAFALEFPQLLAGLVILN 119
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.1.2.37 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00031838 | hydrolase, alpha/beta fold family protein (404 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 261 | |||
| PLN02824 | 294 | PLN02824, PLN02824, hydrolase, alpha/beta fold fam | 0.0 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 3e-46 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 5e-40 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 4e-26 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 2e-17 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 2e-14 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 5e-10 | |
| PLN03084 | 383 | PLN03084, PLN03084, alpha/beta hydrolase fold prot | 4e-09 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 1e-08 | |
| PRK00870 | 302 | PRK00870, PRK00870, haloalkane dehalogenase; Provi | 9e-05 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 3e-04 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 3e-04 | |
| TIGR01250 | 289 | TIGR01250, pro_imino_pep_2, proline-specific pepti | 0.002 |
| >gnl|CDD|178419 PLN02824, PLN02824, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 498 bits (1285), Expect = 0.0
Identities = 189/244 (77%), Positives = 210/244 (86%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLAKSHRVY+IDL+GYGYSDKPNPR FYTFETW QLNDFC DVV D AF ICNS
Sbjct: 51 VLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNS 110
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG+VGLQAAV PE+ RG++L+NISLR LHIKKQPW GRP I++FQNLLR TA GK F+
Sbjct: 111 VGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFF 170
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K VAT E+V+NILCQCY+D S VT+ELVE IL+PGLE GA DVFL+FI YSGGPLPEELL
Sbjct: 171 KSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELL 230
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
P VKCPVLIAWG+KDPWEP+ELGRAY NFD+VEDFIVLP VGHCPQDEAP LVNPL+ESF
Sbjct: 231 PAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESF 290
Query: 242 VTRH 245
V RH
Sbjct: 291 VARH 294
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Length = 294 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 3e-46
Identities = 87/249 (34%), Positives = 131/249 (52%), Gaps = 26/249 (10%)
Query: 1 MVLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPF-YTFETWASQLNDFCKDVVKDQAFFIC 59
VLAK++ VY+IDL+G+G SDKP F YT ETWA + DF ++VV+ I
Sbjct: 109 GVLAKNYTVYAIDLLGFGASDKP-------PGFSYTMETWAELILDFLEEVVQKPTVLIG 161
Query: 60 NSIGGLVGLQAAV-MEPEICRGMILLNISLRM--------LHIKKQPWYGRPLIRSFQNL 110
NS+G L + AA ++ RG++LLN + M IK PL+ L
Sbjct: 162 NSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIK----LLLPLLWLIDFL 217
Query: 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFIC 170
L+ + V ++++NIL Y + V +ELVE I P + GA D F+ +
Sbjct: 218 LKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVT 277
Query: 171 YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFI---VLPNVGHC 225
GP P +L+P++ P+L+ WGD+DP+ P++ +G+ + + S + VL VGHC
Sbjct: 278 GPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHC 337
Query: 226 PQDEAPHLV 234
P D+ P LV
Sbjct: 338 PHDDRPDLV 346
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Length = 360 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 5e-40
Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 22/246 (8%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LAK ++VY++DL+G+G+SDK + Y W Q+ DF K+VVK+ A + NS+
Sbjct: 109 LAKKYKVYALDLLGFGWSDKA----LIE---YDAMVWRDQVADFVKEVVKEPAVLVGNSL 161
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQP---------WYGRPLIRSFQNLLRN 113
GG L AV PE+ G+ LLN + + ++ R +++ + +
Sbjct: 162 GGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQR 221
Query: 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL----EFI 169
G LF++ S + ++L Y D S V + LVE I +P + A +V+ F+
Sbjct: 222 VVLGFLFWQAKQPSR-IESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFL 280
Query: 170 CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDE 229
+ LL ++ CP+L+ WGD DPW F + L GHCP DE
Sbjct: 281 FNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDE 339
Query: 230 APHLVN 235
P VN
Sbjct: 340 VPEQVN 345
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Length = 354 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 103 bits (256), Expect = 4e-26
Identities = 48/247 (19%), Positives = 81/247 (32%), Gaps = 11/247 (4%)
Query: 1 MVLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICN 60
LA +RV + DL G+G SD Y+ +A L + ++ + +
Sbjct: 45 PALAARYRVIAPDLRGHGRSDPA---------GYSLSAYADDLAALLDALGLEKVVLVGH 95
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
S+GG V L A+ P+ RG++L+ + ++
Sbjct: 96 SMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAA 155
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYS-GGPLPEE 179
+ + + + L AA L +
Sbjct: 156 FAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRA 215
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE-DFIVLPNVGHCPQDEAPHLVNPLV 238
L ++ P LI G+ DP P EL R + +V+P GH P EAP +
Sbjct: 216 ALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAAL 275
Query: 239 ESFVTRH 245
+F+ R
Sbjct: 276 LAFLERL 282
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Length = 282 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 2e-17
Identities = 54/240 (22%), Positives = 86/240 (35%), Gaps = 24/240 (10%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
V + DL G+G S P +DF D Y F+ A L + D+ + +S+GGL+
Sbjct: 1 FDVIAFDLRGFGRSSPP--KDFAD---YRFDDLAEDLEALLDALGLDKVNLVGHSMGGLI 55
Query: 67 GLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVAT 126
L A P+ + ++L+ P R + LL N ++ +
Sbjct: 56 ALAYAAKYPDRVKALVLVGTVH--PAGLSSPLTPRGNL--LGLLLDNFFN-----RLYDS 106
Query: 127 SESVRNILC---QCYNDTSQVTEELVEKILQPG--LETGAADVFLEFIC--YSGGPLPEE 179
E++ Q ++ ET A D L +
Sbjct: 107 VEALLGRAIKQFQALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRS-A 165
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238
L + P LI WGD DP P + F + + +V+ + GH Q E P V L+
Sbjct: 166 ALKDIDVPTLIIWGDDDPLVPPDASEKLAALFPNAQ-LVVIDDAGHLAQLEKPDEVAELI 224
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This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 2e-14
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA +RV + DL G+G SD P Y+ E A+ L + + +S+
Sbjct: 21 LAAGYRVLAPDLPGHGDSDGPPR------TPYSLEDDAADLAALLDALGLGPVVLVGHSL 74
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLH 92
GG V L AA PE G++L++ LR L
Sbjct: 75 GGAVALAAAARRPERVAGLVLISPPLRDLE 104
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This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 5e-10
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 39/250 (15%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA V ++DL G+G S K + + A+ + F + ++A + +S+
Sbjct: 154 LAAGRPVIALDLPGHGASSKAVGAG-------SLDELAAAVLAFLDALGIERAHLVGHSM 206
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG V L+ A P+ + L I+ L G + + + A
Sbjct: 207 GGAVALRLAARAPQRVASLTL--IAPAGL--------GPEINGDY---IDGFVAA----- 248
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKIL-QPGLETGAADVFLEFI---CYSGGPLPE 178
+ ++ +L + D + VT ++VE +L L+ D L + ++GG
Sbjct: 249 --ESRRELKPVLELLFADPALVTRQMVEDLLKYKRLD--GVDDALRALADALFAGGRQRV 304
Query: 179 ELLPQV---KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235
+L ++ PVL+ WG++D P + + +V VLP GH PQ EA VN
Sbjct: 305 DLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLPDGVAVH---VLPGAGHMPQMEAAADVN 361
Query: 236 PLVESFVTRH 245
L+ F+ +
Sbjct: 362 RLLAEFLGKA 371
|
Length = 371 |
| >gnl|CDD|178633 PLN03084, PLN03084, alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 4e-09
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 52/250 (20%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VL+K++ + D +G+G+SDKP P F+ YT + + S L ++ D+ +
Sbjct: 149 VLSKNYHAIAFDWLGFGFSDKPQPGYGFN---YTLDEYVSSLESLIDELKSDKVSLVVQG 205
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
++ A P+ + +ILLN L H K P + F N L G++F
Sbjct: 206 YFSPPVVKYASAHPDKIKKLILLNPPLTKEH-AKLP----STLSEFSNFL----LGEIFS 256
Query: 122 K--MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEE 179
+ + A+ +++ + C Y + E+ +P L +G++ L I S + +E
Sbjct: 257 QDPLRASDKALTS--CGPY----AMKEDDAMVYRRPYLTSGSSGFALNAISRS---MKKE 307
Query: 180 LLPQV------------KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF--------IVL 219
L + K P+ + WG +D W N+D VEDF I L
Sbjct: 308 LKKYIEEMRSILTDKNWKTPITVCWGLRDRWL---------NYDGVEDFCKSSQHKLIEL 358
Query: 220 PNVGHCPQDE 229
P GH Q++
Sbjct: 359 PMAGHHVQED 368
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Length = 383 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 1e-08
Identities = 20/62 (32%), Positives = 26/62 (41%)
Query: 174 GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233
E L ++ PVL+ G+ DP P E R + +VLP GH P E P
Sbjct: 124 DADLREALARLTVPVLVIHGEDDPLVPPEAARRLAEALPGAELVVLPGAGHLPHLEHPEE 183
Query: 234 VN 235
V
Sbjct: 184 VA 185
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This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|179147 PRK00870, PRK00870, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 9e-05
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
A HRV + DLIG+G SDKP R+ D YT+ + + + + +C G
Sbjct: 71 AAGHRVIAPDLIGFGRSDKPTRRE--D---YTYARHVEWMRSWFEQLDLTDVTLVCQDWG 125
Query: 64 GLVGLQAAVMEPEICRGMILLNISL 88
GL+GL+ A P+ +++ N L
Sbjct: 126 GLIGLRLAAEHPDRFARLVVANTGL 150
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Length = 302 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L RV D G+G SD P Y+ E A + + ++A F S+
Sbjct: 36 LTPDFRVLRYDKRGHGLSDAPEGP-------YSIEDLADDVLALLDHLGIERAVFCGLSL 88
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGR 101
GGL+ A P+ R ++L N + ++ + W R
Sbjct: 89 GGLIAQGLAARRPDRVRALVLSNTAAKI--GTPESWNAR 125
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 3e-04
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 168 FICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNFDSVEDFIVLPNVGHC 225
+ P + L ++ PVLI G +D P E A + +V+ GH
Sbjct: 87 VLAAGDPPDALDDLAKLTVPVLIIHGTRDGVVPPEEAEALAAALPGPAELVVIEGAGHS 145
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|188121 TIGR01250, pro_imino_pep_2, proline-specific peptidase, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.002
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVG 67
V D +G GYSD+P D D+ +T + + +L + + + D+ + + +S GG++
Sbjct: 55 EVIMYDQLGCGYSDQP---DDSDEELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLA 111
Query: 68 LQAAVMEPEICRGMILLN 85
+ A+ + +G+I+ +
Sbjct: 112 QEYALKYGQHLKGLIISS 129
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase. Length = 289 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 261 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 99.98 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.98 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.97 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.97 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.97 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.97 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.97 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.97 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.97 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.96 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.96 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.96 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.96 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.96 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.96 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.96 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.95 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.95 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.95 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.95 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.95 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.95 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.95 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.94 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.94 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.94 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.94 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.94 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.93 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.93 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.93 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.92 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.92 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.92 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.92 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.92 | |
| PLN02511 | 388 | hydrolase | 99.9 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.9 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.9 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.89 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.87 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.87 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.84 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.83 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.82 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.81 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.8 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.79 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.79 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.78 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.77 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.72 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.7 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.69 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.66 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.65 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.62 | |
| PRK10566 | 249 | esterase; Provisional | 99.61 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.59 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.57 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.57 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.57 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.51 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.51 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.45 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.42 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.37 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.34 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.28 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.28 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.25 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.24 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.19 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.18 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.14 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.12 | |
| PLN00021 | 313 | chlorophyllase | 99.1 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.08 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.08 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.04 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.04 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.04 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.02 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.01 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.01 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.0 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.94 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 98.93 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.88 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 98.83 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 98.83 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 98.82 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 98.81 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.79 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.79 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 98.77 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 98.69 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.68 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.59 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 98.54 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.51 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.49 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 98.45 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.45 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 98.43 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.43 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.36 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 98.33 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.27 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 98.27 | |
| PRK10115 | 686 | protease 2; Provisional | 98.25 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.23 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 98.23 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.21 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.21 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.12 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 98.07 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.03 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 97.98 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 97.92 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 97.65 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 97.59 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 97.57 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.55 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 97.55 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 97.52 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 97.48 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.46 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.41 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 97.37 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 97.31 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.24 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 97.16 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.16 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.11 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 97.09 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.07 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 97.05 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.04 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 97.03 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 96.95 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 96.87 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 96.77 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 96.75 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 96.61 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 96.6 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 96.6 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 96.6 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.59 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 96.56 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 96.55 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.53 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 96.51 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 96.49 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 96.44 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 96.36 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.35 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 96.35 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 96.29 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 96.17 | |
| PLN00413 | 479 | triacylglycerol lipase | 96.16 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 96.12 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 96.05 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 95.99 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 95.92 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 95.88 | |
| PLN02571 | 413 | triacylglycerol lipase | 95.84 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 95.81 | |
| PLN02454 | 414 | triacylglycerol lipase | 95.8 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 95.74 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 95.45 | |
| PLN02408 | 365 | phospholipase A1 | 95.39 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 95.36 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 95.32 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 95.24 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 95.03 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.02 | |
| PLN02324 | 415 | triacylglycerol lipase | 94.9 | |
| PLN02310 | 405 | triacylglycerol lipase | 94.89 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 94.82 | |
| PLN02802 | 509 | triacylglycerol lipase | 94.68 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 94.64 | |
| PLN02753 | 531 | triacylglycerol lipase | 94.39 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 94.38 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 94.25 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 94.17 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 94.15 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 94.13 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 94.12 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 94.09 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 93.97 | |
| PLN02719 | 518 | triacylglycerol lipase | 93.92 | |
| PLN02761 | 527 | lipase class 3 family protein | 93.73 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 93.59 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 93.55 | |
| PLN02847 | 633 | triacylglycerol lipase | 93.41 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 93.3 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 93.24 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 92.91 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 92.83 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 92.54 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 91.05 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 90.91 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 90.76 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 90.5 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 90.32 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 89.72 | |
| PLN02209 | 437 | serine carboxypeptidase | 89.72 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 89.31 | |
| PLN02209 | 437 | serine carboxypeptidase | 89.23 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 89.19 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 88.91 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 88.85 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 87.86 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 87.28 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 86.84 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 86.44 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 86.44 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 85.55 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 85.5 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 81.6 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 81.4 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=264.91 Aligned_cols=244 Identities=77% Similarity=1.352 Sum_probs=168.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+++........|+++++++|+.+++++++.++++|+||||||+|++.+|+.+|++|+++
T Consensus 51 ~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 130 (294)
T PLN02824 51 VLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGV 130 (294)
T ss_pred HHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEE
Confidence 36788999999999999998764221100135899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++..........+...++....+...+........++........+...+...+.+...++++.++.+..+......
T Consensus 131 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (294)
T PLN02824 131 MLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGA 210 (294)
T ss_pred EEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchH
Confidence 99997643221111111111222222222222222223333333333344444444444445566666665554444433
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHH
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 241 (261)
...+..+..+.......+.+.+|+||||+|+|++|.++|.+.++.+.+.++++++++++++||++++|+|++|++.|.+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (294)
T PLN02824 211 VDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESF 290 (294)
T ss_pred HHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 44444433322222223557899999999999999999998888788878888999999999999999999999999999
Q ss_pred HHhc
Q 024900 242 VTRH 245 (261)
Q Consensus 242 l~~~ 245 (261)
++++
T Consensus 291 l~~~ 294 (294)
T PLN02824 291 VARH 294 (294)
T ss_pred HhcC
Confidence 9764
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=240.79 Aligned_cols=238 Identities=35% Similarity=0.635 Sum_probs=153.3
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhh-Ccccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-EPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~ 80 (261)
.|+++|+|+++|+||||.|+++.. ..|+++++++++.+++++++.++++||||||||.+++.+|+. +|++|++
T Consensus 110 ~L~~~~~via~Dl~G~G~S~~~~~------~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~ 183 (360)
T PLN02679 110 VLAKNYTVYAIDLLGFGASDKPPG------FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRG 183 (360)
T ss_pred HHhcCCEEEEECCCCCCCCCCCCC------ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCE
Confidence 367889999999999999987531 248999999999999999999999999999999999999985 7999999
Q ss_pred eEEeecchhhhhhccC-CCCCc---hhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 81 MILLNISLRMLHIKKQ-PWYGR---PLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
+|++++.......... .+... +....+............++........++.++...+.+...++++..+.+..+.
T Consensus 184 LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T PLN02679 184 LVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPA 263 (360)
T ss_pred EEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhc
Confidence 9999975322100000 00000 0000000111111111112222222233333333333333445566655543332
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchh--h---hhhccCCCCccEEEcCCCCCCCCCCCh
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL--G---RAYGNFDSVEDFIVLPNVGHCPQDEAP 231 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~--~---~~~~~~~~~~~~~~i~~~gH~~~~e~p 231 (261)
........+..+............+.+|++|||+|+|++|.++|++. . +.+.+..+++++++|+++||++++|+|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~P 343 (360)
T PLN02679 264 DDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRP 343 (360)
T ss_pred cCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCH
Confidence 22333333333221111111124578899999999999999988763 1 235555678999999999999999999
Q ss_pred hhHHHHHHHHHHhc
Q 024900 232 HLVNPLVESFVTRH 245 (261)
Q Consensus 232 ~~~~~~l~~fl~~~ 245 (261)
++|++.|.+|+++.
T Consensus 344 e~~~~~I~~FL~~~ 357 (360)
T PLN02679 344 DLVHEKLLPWLAQL 357 (360)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999763
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=226.46 Aligned_cols=231 Identities=18% Similarity=0.243 Sum_probs=141.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|++.|+||++|+||||.|+++. ..|++.++++|+.+++++++.++++++||||||.||+.+|..+|++|++|
T Consensus 49 ~L~~~~~via~D~~G~G~S~~~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 121 (295)
T PRK03592 49 HLAGLGRCLAPDLIGMGASDKPD-------IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGI 121 (295)
T ss_pred HHhhCCEEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEE
Confidence 36778899999999999998763 24899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++......... . .... ..+...+.....+.... .........++...+ ...++++.+..+.........
T Consensus 122 il~~~~~~~~~~~~--~-~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 193 (295)
T PRK03592 122 AFMEAIVRPMTWDD--F-PPAV-RELFQALRSPGEGEEMV--LEENVFIERVLPGSI--LRPLSDEEMAVYRRPFPTPES 193 (295)
T ss_pred EEECCCCCCcchhh--c-chhH-HHHHHHHhCcccccccc--cchhhHHhhcccCcc--cccCCHHHHHHHHhhcCCchh
Confidence 99997432111000 0 0000 01111111110000000 000000010000000 112333333332221111111
Q ss_pred HHHHHHHHhhcC-----------CCCccccCCCCCCCEEEEecCCCCCCCc-hhhhhhccCCCCccEEEcCCCCCCCCCC
Q 024900 162 ADVFLEFICYSG-----------GPLPEELLPQVKCPVLIAWGDKDPWEPI-ELGRAYGNFDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 162 ~~~~~~~~~~~~-----------~~~~~~~l~~i~~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e 229 (261)
......+..... .......+.+|+||||+|+|++|.++++ ...+.+.+..+++++++++++||++++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 273 (295)
T PRK03592 194 RRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQED 273 (295)
T ss_pred hhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhc
Confidence 111111100000 0001234678999999999999999844 4444455567789999999999999999
Q ss_pred ChhhHHHHHHHHHHhcCC
Q 024900 230 APHLVNPLVESFVTRHAT 247 (261)
Q Consensus 230 ~p~~~~~~l~~fl~~~~~ 247 (261)
+|++|++.|.+|+++..+
T Consensus 274 ~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 274 SPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CHHHHHHHHHHHHHHhcc
Confidence 999999999999986443
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-31 Score=225.67 Aligned_cols=233 Identities=30% Similarity=0.571 Sum_probs=151.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+++. ..|+...+++|+.++++.+..++++++||||||.|++.+|..+|++|+++
T Consensus 108 ~l~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~l 180 (354)
T PLN02578 108 ELAKKYKVYALDLLGFGWSDKAL-------IEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGV 180 (354)
T ss_pred HHhcCCEEEEECCCCCCCCCCcc-------cccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceE
Confidence 36788999999999999998763 34899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccC-CCC---Cchh-----hHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH
Q 024900 82 ILLNISLRMLHIKKQ-PWY---GRPL-----IRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (261)
Q Consensus 82 v~~~~~~~~~~~~~~-~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (261)
|+++++......... ... .... ...+........ ....+.....+......+...+.+....++...+.+
T Consensus 181 vLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (354)
T PLN02578 181 ALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVV-LGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESI 259 (354)
T ss_pred EEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHH
Confidence 999875432111000 000 0000 011111110000 000001111222222222223333333444444444
Q ss_pred hccCCCCchHHHHHHHHh-hc---CCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 153 LQPGLETGAADVFLEFIC-YS---GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
..+.........+..... +. ......+.+++++|||++|+|++|.++|.+.++.+.+..++++++++ ++||++|+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~ 338 (354)
T PLN02578 260 TEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHD 338 (354)
T ss_pred HhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccc
Confidence 333333333333333221 11 11112345789999999999999999998887778877788999999 68999999
Q ss_pred CChhhHHHHHHHHHH
Q 024900 229 EAPHLVNPLVESFVT 243 (261)
Q Consensus 229 e~p~~~~~~l~~fl~ 243 (261)
|+|++|++.|.+|++
T Consensus 339 e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 339 EVPEQVNKALLEWLS 353 (354)
T ss_pred cCHHHHHHHHHHHHh
Confidence 999999999999985
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=222.68 Aligned_cols=222 Identities=20% Similarity=0.246 Sum_probs=141.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||+|+.+. ..|+++++++|+.++++.++.++++||||||||+|++.+|..+|++|++|
T Consensus 47 ~L~~~~~vi~~Dl~G~G~S~~~~-------~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~l 119 (276)
T TIGR02240 47 ALDPDLEVIAFDVPGVGGSSTPR-------HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKL 119 (276)
T ss_pred HhccCceEEEECCCCCCCCCCCC-------CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhhe
Confidence 47789999999999999998642 34799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|+++++...... + ... ..... .... ..+........... ..+.......++.+............
T Consensus 120 vl~~~~~~~~~~---~--~~~--~~~~~-~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (276)
T TIGR02240 120 ILAATAAGAVMV---P--GKP--KVLMM-MASP---RRYIQPSHGIHIAP----DIYGGAFRRDPELAMAHASKVRSGGK 184 (276)
T ss_pred EEeccCCccccC---C--Cch--hHHHH-hcCc---hhhhccccccchhh----hhccceeeccchhhhhhhhhcccCCC
Confidence 999986532100 0 000 00000 0000 00000000000000 00100000011111111110000011
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHH
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 241 (261)
...+........ ....+.+++|+||||+|+|++|+++|++..+.+.+..++++++++++ ||++++|+|++|++.|.+|
T Consensus 185 ~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~f 262 (276)
T TIGR02240 185 LGYYWQLFAGLG-WTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKF 262 (276)
T ss_pred chHHHHHHHHcC-CchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHH
Confidence 111111111111 11124478999999999999999999988877777778899999975 9999999999999999999
Q ss_pred HHhcCC
Q 024900 242 VTRHAT 247 (261)
Q Consensus 242 l~~~~~ 247 (261)
+++..+
T Consensus 263 l~~~~~ 268 (276)
T TIGR02240 263 LAEERQ 268 (276)
T ss_pred HHHhhh
Confidence 987543
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=216.60 Aligned_cols=218 Identities=15% Similarity=0.108 Sum_probs=137.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
+.+|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++. ++++||||||||.|++.+|..+|++|+++|
T Consensus 28 ~~~~~via~Dl~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lv 101 (255)
T PLN02965 28 AAGFKSTCVDLTGAGISLTDSN------TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAI 101 (255)
T ss_pred hCCceEEEecCCcCCCCCCCcc------ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEE
Confidence 5679999999999999975421 347899999999999999987 499999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhh-hhhHHHHHh-hcCh---HHH-HHHHHhhcCCCCCCcHH-HHHHHhcc
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT-AAGKLFYKM-VATS---ESV-RNILCQCYNDTSQVTEE-LVEKILQP 155 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~---~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 155 (261)
++++.....+.. . . ..+....... ......+.. ...+ ... .......+......... .....+.+
T Consensus 102 l~~~~~~~~~~~---~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (255)
T PLN02965 102 YVAAAMVKPGSI---I--S---PRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRP 173 (255)
T ss_pred EEccccCCCCCC---c--c---HHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCC
Confidence 999753211000 0 0 0000000000 000000000 0000 000 00110111111111100 00111111
Q ss_pred CCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
. ....+... . .....+..+++|+++|+|++|..+|++..+.+.+..++++++++++|||++++|+|++|+
T Consensus 174 ~----~~~~~~~~---~---~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~ 243 (255)
T PLN02965 174 A----PVRAFQDL---D---KLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLF 243 (255)
T ss_pred C----CCcchhhh---h---hccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHH
Confidence 0 00000000 0 012245679999999999999999999888888888889999999999999999999999
Q ss_pred HHHHHHHHhc
Q 024900 236 PLVESFVTRH 245 (261)
Q Consensus 236 ~~l~~fl~~~ 245 (261)
+.|.+|+++.
T Consensus 244 ~~l~~~~~~~ 253 (255)
T PLN02965 244 QYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHHh
Confidence 9999998763
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=211.76 Aligned_cols=219 Identities=18% Similarity=0.179 Sum_probs=134.2
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+ ..++++++++++.+ ++.+++++|||||||.+++.+|..+|++|+++
T Consensus 35 ~L~~~~~vi~~Dl~G~G~S~~~--------~~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 102 (256)
T PRK10349 35 ELSSHFTLHLVDLPGFGRSRGF--------GALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQAL 102 (256)
T ss_pred HHhcCCEEEEecCCCCCCCCCC--------CCCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheE
Confidence 3678899999999999999753 23688888777653 56789999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHH--HHHhccCCCC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELV--EKILQPGLET 159 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 159 (261)
|++++.+........+.........+...+.... ......++............+.. ..........
T Consensus 103 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (256)
T PRK10349 103 VTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDF-----------QRTVERFLALQTMGTETARQDARALKKTVLALPMP 171 (256)
T ss_pred EEecCccceecCCCCCcccHHHHHHHHHHHHhch-----------HHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCC
Confidence 9998754431111111000011111111110000 00011111100000000111111 0001110001
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
........+..+...+ ..+.++++++|||+|+|++|.++|.+.++.+.+..+++++++|+++||++++|+|++|++.+.
T Consensus 172 ~~~~~~~~~~~~~~~~-~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 172 EVDVLNGGLEILKTVD-LRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred cHHHHHHHHHHHHhCc-cHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 1100000011111111 234578999999999999999999988888888888899999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+|-++
T Consensus 251 ~~~~~ 255 (256)
T PRK10349 251 ALKQR 255 (256)
T ss_pred HHhcc
Confidence 99654
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=211.82 Aligned_cols=235 Identities=23% Similarity=0.314 Sum_probs=143.4
Q ss_pred cCCC-CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~~-~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|+.. |||+|+|+||||.|+.|.. ...||+..++.|+..+++.|+.++++++||+||++||+.+|+.+|++|+++
T Consensus 67 la~~~~rviA~DlrGyG~Sd~P~~-----~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~l 141 (322)
T KOG4178|consen 67 LASRGYRVIAPDLRGYGFSDAPPH-----ISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGL 141 (322)
T ss_pred hhhcceEEEecCCCCCCCCCCCCC-----cceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceE
Confidence 4444 9999999999999998753 257999999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHH-hhhhhhhHHHHHhhcChHHHHHHHHhhcC---------C--CCCCcHHHH
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNL-LRNTAAGKLFYKMVATSESVRNILCQCYN---------D--TSQVTEELV 149 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~ 149 (261)
|+++.+......+........+.+.+... .+.....+..+....++.....+....-. + ...++++.+
T Consensus 142 v~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi 221 (322)
T KOG4178|consen 142 VTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDI 221 (322)
T ss_pred EEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHH
Confidence 99997654110000000000000000000 00000000000001111111111100000 0 011334444
Q ss_pred HHHhccCCCCch----HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch-hhhhhccCCCCc-cEEEcCCCC
Q 024900 150 EKILQPGLETGA----ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVE-DFIVLPNVG 223 (261)
Q Consensus 150 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~-~~~~i~~~g 223 (261)
+-+...+ +.+. ...+..+.... ......++.|++||++|+|+.|.+.+.. ..+.+++..++. +.++++++|
T Consensus 222 ~~~~~~f-~~~g~~gplNyyrn~~r~w--~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~g 298 (322)
T KOG4178|consen 222 AFYVSKF-QIDGFTGPLNYYRNFRRNW--EAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIG 298 (322)
T ss_pred HHHHhcc-ccccccccchhhHHHhhCc--hhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCc
Confidence 3332222 2111 12222221110 0112357889999999999999987766 344566665544 778999999
Q ss_pred CCCCCCChhhHHHHHHHHHHhc
Q 024900 224 HCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 224 H~~~~e~p~~~~~~l~~fl~~~ 245 (261)
|+++.|+|+++++++.+|+++.
T Consensus 299 H~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 299 HFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccccCHHHHHHHHHHHHHhh
Confidence 9999999999999999999874
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=208.45 Aligned_cols=212 Identities=18% Similarity=0.268 Sum_probs=139.6
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|..+ ..++++++++|+.+++++++.++++|+||||||.+++.+|..+|++|+++
T Consensus 38 ~l~~~~~vi~~D~~G~G~s~~~--------~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~l 109 (255)
T PRK10673 38 DLVNDHDIIQVDMRNHGLSPRD--------PVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKL 109 (255)
T ss_pred HHhhCCeEEEECCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceE
Confidence 3678899999999999999864 24799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc-
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG- 160 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (261)
|++++++..... .........+...... ...........+.... .++....+.....+..
T Consensus 110 vli~~~~~~~~~----~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 170 (255)
T PRK10673 110 VAIDIAPVDYHV----RRHDEIFAAINAVSEA---------GATTRQQAAAIMRQHL------NEEGVIQFLLKSFVDGE 170 (255)
T ss_pred EEEecCCCCccc----hhhHHHHHHHHHhhhc---------ccccHHHHHHHHHHhc------CCHHHHHHHHhcCCcce
Confidence 999865322100 0000011111100000 0000111111111111 0011111111101000
Q ss_pred ---hHHHHHH-HHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 161 ---AADVFLE-FICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 161 ---~~~~~~~-~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
....... +.... ..+.++.+++|+|+|+|++|.+++.+..+.+.+..+++++.+++++||++++|+|+++++
T Consensus 171 ~~~~~~~~~~~~~~~~----~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 246 (255)
T PRK10673 171 WRFNVPVLWDQYPHIV----GWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLR 246 (255)
T ss_pred eEeeHHHHHHhHHHHh----CCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHH
Confidence 0011101 11111 123467889999999999999999888888887788899999999999999999999999
Q ss_pred HHHHHHHh
Q 024900 237 LVESFVTR 244 (261)
Q Consensus 237 ~l~~fl~~ 244 (261)
.|..|+++
T Consensus 247 ~l~~fl~~ 254 (255)
T PRK10673 247 AIRRYLND 254 (255)
T ss_pred HHHHHHhc
Confidence 99999975
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=217.64 Aligned_cols=235 Identities=19% Similarity=0.205 Sum_probs=137.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhcCCCeE-EEEcChhHHHHHHHHhhCcccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF-CKDVVKDQAF-FICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~-~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
++++|+||++|+||||.|+.+..........|+++++++++.++ ++++++++++ |+||||||+||+.+|+++|++|++
T Consensus 102 ~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~ 181 (360)
T PRK06489 102 DASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDA 181 (360)
T ss_pred cccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhhe
Confidence 37889999999999999986531100001248999999998885 4889999986 899999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHH------------H-hhcCCCCCCcHH
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNIL------------C-QCYNDTSQVTEE 147 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~~~~ 147 (261)
+|++++.+...... .+ ................. .......+....... . ............
T Consensus 182 LVLi~s~~~~~~~~--~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
T PRK06489 182 LMPMASQPTEMSGR--NW---MWRRMLIESIRNDPAWN-NGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADK 255 (360)
T ss_pred eeeeccCcccccHH--HH---HHHHHHHHHHHhCCCCC-CCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHH
Confidence 99998753211000 00 00000000000000000 000000000000000 0 000000000111
Q ss_pred HHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh--hhhccCCCCccEEEcCCC---
Q 024900 148 LVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG--RAYGNFDSVEDFIVLPNV--- 222 (261)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~--~~~~~~~~~~~~~~i~~~--- 222 (261)
.++.......... ...+.............+.+.+|+||||+|+|++|.++|++.+ +.+.+..|++++++|++|
T Consensus 256 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~ 334 (360)
T PRK06489 256 LVDERLAAPVTAD-ANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPET 334 (360)
T ss_pred HHHHHHHhhhhcC-HHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCC
Confidence 2222221111111 1111111111111112356889999999999999999998865 567777888999999996
Q ss_pred -CCCCCCCChhhHHHHHHHHHHhc
Q 024900 223 -GHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 223 -gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
||+++ |+|++|++.|.+|+++.
T Consensus 335 ~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 335 RGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred CCcccc-cCHHHHHHHHHHHHHhc
Confidence 99998 89999999999999865
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=217.77 Aligned_cols=232 Identities=29% Similarity=0.422 Sum_probs=142.6
Q ss_pred CcCCC--CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 2 VLAKS--HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 2 ~L~~~--~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.|++. ++|+++|++|||.|+..+. ...|+..++++.+..++...+.++++++|||+||.+|+.+|+.+|+.|+
T Consensus 80 ~L~~~~~~~v~aiDl~G~g~~s~~~~-----~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~ 154 (326)
T KOG1454|consen 80 LLSKAKGLRVLAIDLPGHGYSSPLPR-----GPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVD 154 (326)
T ss_pred ccccccceEEEEEecCCCCcCCCCCC-----CCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCccccc
Confidence 35666 9999999999996554321 1459999999999999999999999999999999999999999999999
Q ss_pred ceEEee---cchhhhhhccCCCCCchhhHHHHHHhhhhhhh---HHHHH-hhcChHHHHHHHHhhcCCCCCCcHHHHHHH
Q 024900 80 GMILLN---ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG---KLFYK-MVATSESVRNILCQCYNDTSQVTEELVEKI 152 (261)
Q Consensus 80 ~lv~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (261)
+||+++ +..... +.........+...+...... ..... ..... .+...+...+.+ .....+....+
T Consensus 155 ~lv~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ 227 (326)
T KOG1454|consen 155 SLVLLDLLGPPVYST-----PKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSE-GLLRCLKVVYTD-PSRLLEKLLHL 227 (326)
T ss_pred ceeeecccccccccC-----CcchhHHHHhhhhhccHhhhcCccccccchhheeH-hhhcceeeeccc-cccchhhhhhh
Confidence 999555 322211 000000001111111100000 00000 00000 000011111111 11222222222
Q ss_pred hccCC-CCchHHHHHHHHhhcCC--CCccccCCCCC-CCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 153 LQPGL-ETGAADVFLEFICYSGG--PLPEELLPQVK-CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 153 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~l~~i~-~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
+.+.. .....+.+.++...... ......+.+|. ||||||||++|+++|.+.+..+.+..|++++.+|++|||++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~ 307 (326)
T KOG1454|consen 228 LSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHL 307 (326)
T ss_pred eecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCccccc
Confidence 22211 11122222222222111 11123456776 9999999999999999988777776699999999999999999
Q ss_pred CChhhHHHHHHHHHHhc
Q 024900 229 EAPHLVNPLVESFVTRH 245 (261)
Q Consensus 229 e~p~~~~~~l~~fl~~~ 245 (261)
|.|++|+++|..|+..+
T Consensus 308 e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 308 ERPEEVAALLRSFIARL 324 (326)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999999875
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-29 Score=208.58 Aligned_cols=221 Identities=21% Similarity=0.201 Sum_probs=135.7
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
..+|+|+++|+||||.|+.+... ..++. .+++|+.++++.++.++++++||||||.+++.+|..+|++|+++|+
T Consensus 58 ~~~~~vi~~D~~G~G~S~~~~~~-----~~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 131 (282)
T TIGR03343 58 DAGYRVILKDSPGFNKSDAVVMD-----EQRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLIL 131 (282)
T ss_pred hCCCEEEEECCCCCCCCCCCcCc-----ccccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEE
Confidence 45799999999999999864211 11222 5688999999999999999999999999999999999999999999
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC-CchH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE-TGAA 162 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 162 (261)
+++....... ..+.. ......+...+... ........+.....+....+++..+..+..... ....
T Consensus 132 ~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (282)
T TIGR03343 132 MGPGGLGPSL-FAPMP-MEGIKLLFKLYAEP-----------SYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHL 198 (282)
T ss_pred ECCCCCCccc-cccCc-hHHHHHHHHHhcCC-----------CHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHH
Confidence 9875221000 00000 00001111111000 000011111111111112222222211110000 0000
Q ss_pred HHHHHHHhhcC--CCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 163 DVFLEFICYSG--GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 163 ~~~~~~~~~~~--~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
..+........ .....+.+++|+||||+|+|++|.+++++.++.+.+..+++++++++++||++++|+|++|+++|.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~ 278 (282)
T TIGR03343 199 KNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVID 278 (282)
T ss_pred HHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHH
Confidence 11110000000 0001234788999999999999999998888777777788999999999999999999999999999
Q ss_pred HHH
Q 024900 241 FVT 243 (261)
Q Consensus 241 fl~ 243 (261)
|++
T Consensus 279 fl~ 281 (282)
T TIGR03343 279 FLR 281 (282)
T ss_pred Hhh
Confidence 985
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=213.17 Aligned_cols=216 Identities=20% Similarity=0.288 Sum_probs=134.0
Q ss_pred cC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|+ ++|+|+++|+||||+|+++.. ...|+++++++|+.+++++++.++++|+||||||.+|+.+|..+|++|+++
T Consensus 69 L~~~gy~vi~~Dl~G~G~S~~~~~-----~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 143 (302)
T PRK00870 69 LAAAGHRVIAPDLIGFGRSDKPTR-----REDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARL 143 (302)
T ss_pred HHhCCCEEEEECCCCCCCCCCCCC-----cccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEE
Confidence 55 479999999999999986531 135899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhh---hhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA---AGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
|++++...... ......+ ..+.......+ ... ++.... ....+++....+..+...
T Consensus 144 vl~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~---------------~~~~~~~~~~~~~~~~~~ 202 (302)
T PRK00870 144 VVANTGLPTGD----GPMPDAF-WAWRAFSQYSPVLPVGR-LVNGGT---------------VRDLSDAVRAAYDAPFPD 202 (302)
T ss_pred EEeCCCCCCcc----ccchHHH-hhhhcccccCchhhHHH-Hhhccc---------------cccCCHHHHHHhhcccCC
Confidence 99986421100 0000000 00000000000 000 000000 000111111111000000
Q ss_pred C---chHHHHHHHHhhcC-------CCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCcc---EEEcCCCCCC
Q 024900 159 T---GAADVFLEFICYSG-------GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED---FIVLPNVGHC 225 (261)
Q Consensus 159 ~---~~~~~~~~~~~~~~-------~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~ 225 (261)
. .....+..+..... .......+.+++|||++|+|++|.++|.+. +.+.+..++++ +.+++++||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~ 281 (302)
T PRK00870 203 ESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHF 281 (302)
T ss_pred hhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCcc
Confidence 0 00000000000000 000013467899999999999999998765 66776666665 8899999999
Q ss_pred CCCCChhhHHHHHHHHHHhc
Q 024900 226 PQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 226 ~~~e~p~~~~~~l~~fl~~~ 245 (261)
+++|+|++|++.|.+|++++
T Consensus 282 ~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 282 LQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred chhhChHHHHHHHHHHHhcC
Confidence 99999999999999999765
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=206.35 Aligned_cols=221 Identities=18% Similarity=0.237 Sum_probs=134.2
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+++.. ..|+++++++++.+++++++.++++++||||||.|++.+|+.+|++|+++|
T Consensus 57 l~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lv 130 (286)
T PRK03204 57 LRDRFRCVAPDYLGFGLSERPSG------FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVV 130 (286)
T ss_pred HhCCcEEEEECCCCCCCCCCCCc------cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEE
Confidence 67789999999999999986531 247899999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
++++..... ... ....+.............+. ......+++... .....+++....+..........
T Consensus 131 l~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 197 (286)
T PRK03204 131 LGNTWFWPA-------DTL-AMKAFSRVMSSPPVQYAILR---RNFFVERLIPAG--TEHRPSSAVMAHYRAVQPNAAAR 197 (286)
T ss_pred EECccccCC-------Cch-hHHHHHHHhccccchhhhhh---hhHHHHHhcccc--ccCCCCHHHHHHhcCCCCCHHHH
Confidence 987643110 000 00001110100000000000 000001111000 01122333332222111111111
Q ss_pred HHHHHHH-hhcC-CCCc---cccCC--CCCCCEEEEecCCCCCCCch-hhhhhccCCCCccEEEcCCCCCCCCCCChhhH
Q 024900 163 DVFLEFI-CYSG-GPLP---EELLP--QVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 163 ~~~~~~~-~~~~-~~~~---~~~l~--~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
.....+. .+.. .... ...+. .+++||++|+|++|.++++. ..+.+.+..|+.++++|+++||++++|+|++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~ 277 (286)
T PRK03204 198 RGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRI 277 (286)
T ss_pred HHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHH
Confidence 1110000 0000 0000 00111 13899999999999987554 45667777888999999999999999999999
Q ss_pred HHHHHHHH
Q 024900 235 NPLVESFV 242 (261)
Q Consensus 235 ~~~l~~fl 242 (261)
++.|.+|+
T Consensus 278 ~~~i~~~~ 285 (286)
T PRK03204 278 AAAIIERF 285 (286)
T ss_pred HHHHHHhc
Confidence 99999997
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-29 Score=212.57 Aligned_cols=231 Identities=10% Similarity=0.074 Sum_probs=134.4
Q ss_pred CcC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHH-----HHHHHHH----HHHHhcCCC-eEEEEcChhHHHHHHH
Q 024900 2 VLA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFET-----WASQLND----FCKDVVKDQ-AFFICNSIGGLVGLQA 70 (261)
Q Consensus 2 ~L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~-----~a~dl~~----~~~~l~~~~-~~lvGhS~Gg~va~~~ 70 (261)
.|. ++|+||++|+||||.|+.+... ...|++++ +++|+.+ ++++|++++ ++||||||||+||+++
T Consensus 66 ~l~~~~~~vi~~D~~G~G~S~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~ 141 (339)
T PRK07581 66 ALDPEKYFIIIPNMFGNGLSSSPSNT----PAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHW 141 (339)
T ss_pred ccCcCceEEEEecCCCCCCCCCCCCC----CCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHH
Confidence 354 6899999999999999865311 01234332 4556654 667899999 5899999999999999
Q ss_pred HhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhh--------------h---hHHHHHhhcChHHHHHH
Q 024900 71 AVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA--------------A---GKLFYKMVATSESVRNI 133 (261)
Q Consensus 71 a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~---~~~~~~~~~~~~~~~~~ 133 (261)
|++||++|++||++++........ ..+.+.....+.... . ...+......+...+..
T Consensus 142 a~~~P~~V~~Lvli~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (339)
T PRK07581 142 AVRYPDMVERAAPIAGTAKTTPHN------FVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQE 215 (339)
T ss_pred HHHCHHHHhhheeeecCCCCCHHH------HHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhh
Confidence 999999999999998754321000 000000000000000 0 00000000000000000
Q ss_pred HHhhcCCCC-CCcHHHHHHHhccC---CCCchHHHHH-HHHhh--cCC----CCccccCCCCCCCEEEEecCCCCCCCch
Q 024900 134 LCQCYNDTS-QVTEELVEKILQPG---LETGAADVFL-EFICY--SGG----PLPEELLPQVKCPVLIAWGDKDPWEPIE 202 (261)
Q Consensus 134 ~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~--~~~----~~~~~~l~~i~~Pvlii~G~~D~~~~~~ 202 (261)
.+.... ...++.+....... .......... .+... ... ....+.+++|+||||+|+|++|.++|++
T Consensus 216 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~ 292 (339)
T PRK07581 216 ---LWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPE 292 (339)
T ss_pred ---hccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHH
Confidence 000000 00012221111110 0111111110 01100 000 0113457889999999999999999988
Q ss_pred hhhhhccCCCCccEEEcCC-CCCCCCCCChhhHHHHHHHHHHhc
Q 024900 203 LGRAYGNFDSVEDFIVLPN-VGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 203 ~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
.++.+.+.+++++++++++ +||++++|+|+.+++.|++||++.
T Consensus 293 ~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 293 DCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred HHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 8777777778899999999 999999999999999999999875
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=210.34 Aligned_cols=226 Identities=15% Similarity=0.138 Sum_probs=134.1
Q ss_pred c-CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCe-EEEEcChhHHHHHHHHhhCcccccc
Q 024900 3 L-AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQA-FFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L-~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~-~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
| +++|+||++|+||||.|.. ..|++.++++|+.+++++++++++ +||||||||+||+++|.++|++|++
T Consensus 95 L~~~~~~Vi~~Dl~G~g~s~~---------~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~ 165 (343)
T PRK08775 95 LDPARFRLLAFDFIGADGSLD---------VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRT 165 (343)
T ss_pred cCccccEEEEEeCCCCCCCCC---------CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhhe
Confidence 5 5789999999999998842 236889999999999999999775 7999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHh--h-h---hh----hhHHH-HHhhcChHHHHHHHHhhcCC-CCCCc---
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLL--R-N---TA----AGKLF-YKMVATSESVRNILCQCYND-TSQVT--- 145 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~---~~----~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~--- 145 (261)
||++++..... +. ............ . . .. ....+ +......+.....+...... .....
T Consensus 166 LvLi~s~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T PRK08775 166 LVVVSGAHRAH-----PY-AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAA 239 (343)
T ss_pred EEEECccccCC-----HH-HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchH
Confidence 99999754211 00 000000000000 0 0 00 00000 00001111111111000000 00000
Q ss_pred HHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCC-CC
Q 024900 146 EELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPN-VG 223 (261)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~-~g 223 (261)
..++...............+..+.... ......+.+|++|||+|+|++|..+|++..+.+.+ +.+++++++|++ +|
T Consensus 240 ~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aG 317 (343)
T PRK08775 240 EDYLDAAGAQYVARTPVNAYLRLSESI--DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYG 317 (343)
T ss_pred HHHHHHHHHHHHHhcChhHHHHHHHHH--hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCcc
Confidence 111111000000000001111111000 01122367899999999999999999876666555 457899999985 99
Q ss_pred CCCCCCChhhHHHHHHHHHHhc
Q 024900 224 HCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 224 H~~~~e~p~~~~~~l~~fl~~~ 245 (261)
|++++|+|++|++.|.+||++.
T Consensus 318 H~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 318 HDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred HHHHhcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999764
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-28 Score=202.15 Aligned_cols=227 Identities=19% Similarity=0.184 Sum_probs=139.3
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++.++++|+||||||.+++.+|..+|++++++
T Consensus 50 ~l~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 123 (278)
T TIGR03056 50 PLARSFRVVAPDLPGHGFTRAPFR------FRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMV 123 (278)
T ss_pred HHhhCcEEEeecCCCCCCCCCccc------cCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceE
Confidence 467889999999999999986531 25799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhh-cChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV-ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
|++++......... .+. .+... ................ .........+... ....++.....+........
T Consensus 124 v~~~~~~~~~~~~~-~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 195 (278)
T TIGR03056 124 VGINAALMPFEGMA-GTL-FPYMA---RVLACNPFTPPMMSRGAADQQRVERLIRDT---GSLLDKAGMTYYGRLIRSPA 195 (278)
T ss_pred EEEcCccccccccc-ccc-cchhh---HhhhhcccchHHHHhhcccCcchhHHhhcc---ccccccchhhHHHHhhcCch
Confidence 99987543210000 000 00000 0000000000000000 0000011111000 00011111111100000000
Q ss_pred hHHHHHHHH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 161 AADVFLEFI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
......... .+... .....+++|++|+++|+|++|..+|.+..+.+.+..++++++.++++||++++|+|+++++.|.
T Consensus 196 ~~~~~~~~~~~~~~~-~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 274 (278)
T TIGR03056 196 HVDGALSMMAQWDLA-PLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLIL 274 (278)
T ss_pred hhhHHHHHhhccccc-chhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHH
Confidence 001111111 01000 1123467899999999999999999887777777777889999999999999999999999999
Q ss_pred HHHH
Q 024900 240 SFVT 243 (261)
Q Consensus 240 ~fl~ 243 (261)
+|++
T Consensus 275 ~f~~ 278 (278)
T TIGR03056 275 QAAE 278 (278)
T ss_pred HHhC
Confidence 9984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-28 Score=197.43 Aligned_cols=211 Identities=14% Similarity=0.142 Sum_probs=125.9
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccc-ccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI-CRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~-v~~lv~ 83 (261)
++|+|+++|+||||.|+++. ..+++.+++|+.+++++++.++++++||||||.+|+.+|..+|+. |+++|+
T Consensus 26 ~~~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl 97 (242)
T PRK11126 26 PDYPRLYIDLPGHGGSAAIS--------VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIV 97 (242)
T ss_pred CCCCEEEecCCCCCCCCCcc--------ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEE
Confidence 36999999999999998653 248999999999999999999999999999999999999999664 999999
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHh-hcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
+++.+..... . .............. .+............+.. .+. ...++....+.........
T Consensus 98 ~~~~~~~~~~--------~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 162 (242)
T PRK11126 98 EGGNPGLQNA--------E--ERQARWQNDRQWAQ-RFRQEPLEQVLADWYQQPVFA---SLNAEQRQQLVAKRSNNNG- 162 (242)
T ss_pred eCCCCCCCCH--------H--HHHHHHhhhHHHHH-HhccCcHHHHHHHHHhcchhh---ccCccHHHHHHHhcccCCH-
Confidence 8765322100 0 00000000000000 00000000111111100 000 0111111111111000000
Q ss_pred HHHHHHHh-h--cCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 163 DVFLEFIC-Y--SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 163 ~~~~~~~~-~--~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
.....+.. . .......+.+.+++|||++|+|++|..+. ..+. . .+++++++++|||++++|+|++|++.|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~----~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 236 (242)
T PRK11126 163 AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-ALAQ----Q-LALPLHVIPNAGHNAHRENPAAFAASLA 236 (242)
T ss_pred HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-HHHH----H-hcCeEEEeCCCCCchhhhChHHHHHHHH
Confidence 11111111 1 01111124578899999999999998543 2221 1 2589999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+|+++
T Consensus 237 ~fl~~ 241 (242)
T PRK11126 237 QILRL 241 (242)
T ss_pred HHHhh
Confidence 99975
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-28 Score=213.41 Aligned_cols=227 Identities=19% Similarity=0.283 Sum_probs=136.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN-DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~-~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
++|+|+++|+||||+|+++.. ..|+++++++++. .+++.++.++++++||||||.|++.+|.++|++|++||+
T Consensus 231 ~~yrVia~Dl~G~G~S~~p~~------~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVL 304 (481)
T PLN03087 231 STYRLFAVDLLGFGRSPKPAD------SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTL 304 (481)
T ss_pred CCCEEEEECCCCCCCCcCCCC------CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEE
Confidence 689999999999999987531 3589999999995 889999999999999999999999999999999999999
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHh-hh--hh--hh---HHHHHhhcC--------hHHHHHHHHhhcCCCCCCcHH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLL-RN--TA--AG---KLFYKMVAT--------SESVRNILCQCYNDTSQVTEE 147 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~--~~---~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 147 (261)
++++..... .............. .. .. .+ ..++..... .......+...... ......
T Consensus 305 i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~ 378 (481)
T PLN03087 305 LAPPYYPVP-----KGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTR-NRMRTF 378 (481)
T ss_pred ECCCccccc-----cchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhh-hhhhHH
Confidence 987532210 00000000000000 00 00 00 000000000 00000000000000 000000
Q ss_pred HHHHHhccCCCCchHHHHHHHHhhcCC---CCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCC
Q 024900 148 LVEKILQPGLETGAADVFLEFICYSGG---PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGH 224 (261)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH 224 (261)
..+.+... ...........+...... ......+.+|++|||+|+|++|.++|++.++.+.+..|++++++|+++||
T Consensus 379 l~~~~~~~-~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH 457 (481)
T PLN03087 379 LIEGFFCH-THNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDH 457 (481)
T ss_pred HHHHHHhc-cchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 11111000 000000011111110000 00012234789999999999999999999888888788899999999999
Q ss_pred CCCC-CChhhHHHHHHHHHHh
Q 024900 225 CPQD-EAPHLVNPLVESFVTR 244 (261)
Q Consensus 225 ~~~~-e~p~~~~~~l~~fl~~ 244 (261)
++++ |+|++|++.|.+|+..
T Consensus 458 ~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 458 ITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred cchhhcCHHHHHHHHHHHhhc
Confidence 9996 9999999999999965
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-27 Score=204.53 Aligned_cols=226 Identities=22% Similarity=0.386 Sum_probs=139.9
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+++... ....|+++++++++.+++++++.++++|+||||||.|++.+|..+|++|+++
T Consensus 149 ~L~~~~~Via~DlpG~G~S~~p~~~---~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~l 225 (383)
T PLN03084 149 VLSKNYHAIAFDWLGFGFSDKPQPG---YGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKL 225 (383)
T ss_pred HHhcCCEEEEECCCCCCCCCCCccc---ccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEE
Confidence 3678899999999999999876421 0125899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|+++++..... ...+ .. ...+...+ ....+ ...... .....+.. . .....+++....+..+....+.
T Consensus 226 ILi~~~~~~~~-~~~p---~~-l~~~~~~l----~~~~~-~~~~~~-~~~~~~~~-~-~~~~~~~e~~~~~~~~~~~~~~ 292 (383)
T PLN03084 226 ILLNPPLTKEH-AKLP---ST-LSEFSNFL----LGEIF-SQDPLR-ASDKALTS-C-GPYAMKEDDAMVYRRPYLTSGS 292 (383)
T ss_pred EEECCCCcccc-ccch---HH-HHHHHHHH----hhhhh-hcchHH-HHhhhhcc-c-CccCCCHHHHHHHhccccCCcc
Confidence 99997642110 0000 00 00010000 00000 000000 00000000 0 0111233333333222222211
Q ss_pred HHH-HHHHH-hhcCC--CC---ccccC--CCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 162 ADV-FLEFI-CYSGG--PL---PEELL--PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 162 ~~~-~~~~~-~~~~~--~~---~~~~l--~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
... ...+. .+... .. ....+ ..|++|||+|||++|.+++.+..+.+.+.. ++++++|++|||++++|+|+
T Consensus 293 ~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-~a~l~vIp~aGH~~~~E~Pe 371 (383)
T PLN03084 293 SGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSS-QHKLIELPMAGHHVQEDCGE 371 (383)
T ss_pred hHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHhc-CCeEEEECCCCCCcchhCHH
Confidence 111 00010 01000 00 00111 468999999999999999988776666653 68999999999999999999
Q ss_pred hHHHHHHHHHHh
Q 024900 233 LVNPLVESFVTR 244 (261)
Q Consensus 233 ~~~~~l~~fl~~ 244 (261)
+++++|.+|+.+
T Consensus 372 ~v~~~I~~Fl~~ 383 (383)
T PLN03084 372 ELGGIISGILSK 383 (383)
T ss_pred HHHHHHHHHhhC
Confidence 999999999863
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=191.28 Aligned_cols=216 Identities=17% Similarity=0.214 Sum_probs=131.0
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.. ..++++++++++.+.+ .++++++||||||.+++.+|..+|++|.++
T Consensus 26 ~l~~~~~vi~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 93 (245)
T TIGR01738 26 ELSAHFTLHLVDLPGHGRSRGF--------GPLSLADAAEAIAAQA----PDPAIWLGWSLGGLVALHIAATHPDRVRAL 93 (245)
T ss_pred hhccCeEEEEecCCcCccCCCC--------CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhhee
Confidence 4678899999999999999753 2368888888776543 479999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCc-hhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHh-hcCCC-CCCcHHHHHHHhccCCC
Q 024900 82 ILLNISLRMLHIKKQPWYGR-PLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDT-SQVTEELVEKILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 158 (261)
|++++.+........+.... .....+...+.... ......++.. ..... .......+...+.....
T Consensus 94 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (245)
T TIGR01738 94 VTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDY-----------QRTIERFLALQTLGTPTARQDARALKQTLLARPT 162 (245)
T ss_pred eEecCCcccccCCcccccCCHHHHHHHHHHhhhhH-----------HHHHHHHHHHHHhcCCccchHHHHHHHHhhccCC
Confidence 99987653321111000000 01111111111000 0000001000 00100 00000111111111111
Q ss_pred CchHHHHHHHH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 159 TGAADVFLEFI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
... ..+.... .... ......+.+|++||++|+|++|.++|.+..+.+.+..+++++++++++||++++|+|++|++.
T Consensus 163 ~~~-~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 240 (245)
T TIGR01738 163 PNV-QVLQAGLEILAT-VDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCAL 240 (245)
T ss_pred CCH-HHHHHHHHHhhc-ccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHH
Confidence 111 1111111 1111 111234678999999999999999998887777777788999999999999999999999999
Q ss_pred HHHHH
Q 024900 238 VESFV 242 (261)
Q Consensus 238 l~~fl 242 (261)
|.+|+
T Consensus 241 i~~fi 245 (245)
T TIGR01738 241 LVAFK 245 (245)
T ss_pred HHhhC
Confidence 99985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=195.72 Aligned_cols=218 Identities=20% Similarity=0.284 Sum_probs=137.4
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+.. ..|+++++++++.++++.++.++++++||||||.+++.+|+.+|++|+++|
T Consensus 36 l~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i 109 (257)
T TIGR03611 36 LTQRFHVVTYDHRGTGRSPGELP------PGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLV 109 (257)
T ss_pred HHhccEEEEEcCCCCCCCCCCCc------ccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHhe
Confidence 56789999999999999976431 358999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHh----hcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM----VATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
++++..... +.....+. .....+..... ..+... ......+. . ......+..... ... .
T Consensus 110 ~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~-~~~--~ 172 (257)
T TIGR03611 110 LINAWSRPD-----PHTRRCFD-VRIALLQHAGP-EAYVHAQALFLYPADWIS----E---NAARLAADEAHA-LAH--F 172 (257)
T ss_pred eecCCCCCC-----hhHHHHHH-HHHHHHhccCc-chhhhhhhhhhccccHhh----c---cchhhhhhhhhc-ccc--c
Confidence 998643210 00000000 00011110000 000000 00000000 0 000000000000 000 0
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
.........+........ ...+.++++|+++++|++|.++|.+.++.+.+..++.+++.++++||++++|+|+++++.|
T Consensus 173 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 251 (257)
T TIGR03611 173 PGKANVLRRINALEAFDV-SARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRAL 251 (257)
T ss_pred CccHHHHHHHHHHHcCCc-HHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHH
Confidence 000011111111111111 2457789999999999999999998877776666778999999999999999999999999
Q ss_pred HHHHHh
Q 024900 239 ESFVTR 244 (261)
Q Consensus 239 ~~fl~~ 244 (261)
.+||++
T Consensus 252 ~~fl~~ 257 (257)
T TIGR03611 252 LDFLKT 257 (257)
T ss_pred HHHhcC
Confidence 999863
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-27 Score=202.72 Aligned_cols=234 Identities=17% Similarity=0.183 Sum_probs=136.3
Q ss_pred cCCCCeEEEecCCC--CCCCCCCC----CCCCC-CCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEcChhHHHHHHHHhhC
Q 024900 3 LAKSHRVYSIDLIG--YGYSDKPN----PRDFF-DKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 3 L~~~~~V~~~Dl~G--~G~S~~~~----~~~~~-~~~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~~ 74 (261)
++++|+||++|+|| ||.|.... ..... +...|+++++++|+.++++++++++ ++|+||||||+|++.+|+++
T Consensus 69 ~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 69 DTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred CCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 36889999999999 66664321 10000 0124899999999999999999999 99999999999999999999
Q ss_pred cccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhh-------------h-----hhHHHHH-hhcChHHHHHHHH
Q 024900 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT-------------A-----AGKLFYK-MVATSESVRNILC 135 (261)
Q Consensus 75 p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-----~~~~~~~-~~~~~~~~~~~~~ 135 (261)
|++|+++|++++.+...... ..+........... + ..+.+.. .....+.+...+.
T Consensus 149 p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~ 222 (351)
T TIGR01392 149 PERVRAIVVLATSARHSAWC------IAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFG 222 (351)
T ss_pred hHhhheEEEEccCCcCCHHH------HHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhC
Confidence 99999999999864321000 00000000000000 0 0000000 0011111111110
Q ss_pred hhcCCC-CC-------Cc-HHHHH----HHhccCCCCchHHHHHHHH-hhcCC---CCccccCCCCCCCEEEEecCCCCC
Q 024900 136 QCYNDT-SQ-------VT-EELVE----KILQPGLETGAADVFLEFI-CYSGG---PLPEELLPQVKCPVLIAWGDKDPW 198 (261)
Q Consensus 136 ~~~~~~-~~-------~~-~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~l~~i~~Pvlii~G~~D~~ 198 (261)
...... .. .. +.+.. .+... ............. .+... ....+.+++|++|||+|+|++|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~ 301 (351)
T TIGR01392 223 RAPQSGESPASGFDTRFQVESYLRYQGDKFVDR-FDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWL 301 (351)
T ss_pred cCcccccccccccCccchHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccc
Confidence 000000 00 00 11110 01110 0011100000011 11000 011356889999999999999999
Q ss_pred CCchhhhhhccCCCCccEE-----EcCCCCCCCCCCChhhHHHHHHHHHH
Q 024900 199 EPIELGRAYGNFDSVEDFI-----VLPNVGHCPQDEAPHLVNPLVESFVT 243 (261)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~-----~i~~~gH~~~~e~p~~~~~~l~~fl~ 243 (261)
+|++..+.+.+.++++++. +++++||++++|+|++|++.|.+||+
T Consensus 302 ~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 302 FPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred cCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 9998888887777777765 56899999999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-27 Score=191.37 Aligned_cols=216 Identities=21% Similarity=0.305 Sum_probs=136.0
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+. ..+++.++++|+.++++.++.++++++||||||++++.+|..+|++|+++
T Consensus 35 ~l~~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~l 107 (251)
T TIGR02427 35 ALTPDFRVLRYDKRGHGLSDAPE-------GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRAL 107 (251)
T ss_pred HhhcccEEEEecCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHH
Confidence 36778999999999999997542 34799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++...... + ..+...+....... ... . ........+...+........+.+...... ...
T Consensus 108 i~~~~~~~~~~----~---~~~~~~~~~~~~~~-~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 170 (251)
T TIGR02427 108 VLSNTAAKIGT----P---ESWNARIAAVRAEG-LAA-----L-ADAVLERWFTPGFREAHPARLDLYRNMLVR---QPP 170 (251)
T ss_pred hhccCccccCc----h---hhHHHHHhhhhhcc-HHH-----H-HHHHHHHHcccccccCChHHHHHHHHHHHh---cCH
Confidence 99986532110 0 00000000000000 000 0 000000000000000000000011111100 000
Q ss_pred HHHHHHHH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 162 ADVFLEFI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 162 ~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
..+.... .... ......+.++++|+++|+|++|..+|.+..+.+.+..++.++++++++||++++|+|+++++.+.+
T Consensus 171 -~~~~~~~~~~~~-~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 248 (251)
T TIGR02427 171 -DGYAGCCAAIRD-ADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRD 248 (251)
T ss_pred -HHHHHHHHHHhc-ccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHH
Confidence 0010000 0111 111234678999999999999999999877766666677899999999999999999999999999
Q ss_pred HHH
Q 024900 241 FVT 243 (261)
Q Consensus 241 fl~ 243 (261)
|+.
T Consensus 249 fl~ 251 (251)
T TIGR02427 249 FLR 251 (251)
T ss_pred HhC
Confidence 973
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=190.92 Aligned_cols=231 Identities=21% Similarity=0.335 Sum_probs=136.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|++.++||++|+||+|+|++|...- ...-....+++-|+++-.+.++++.+|+|||+||+++..||+.||++|..|
T Consensus 112 ~La~~~~vyaiDllG~G~SSRP~F~~---d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kL 188 (365)
T KOG4409|consen 112 DLAKIRNVYAIDLLGFGRSSRPKFSI---DPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKL 188 (365)
T ss_pred hhhhcCceEEecccCCCCCCCCCCCC---CcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceE
Confidence 47789999999999999999886321 122235578999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHH------------HHhh-hhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHH
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQ------------NLLR-NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEEL 148 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (261)
|++++.....+....+...++-...+. .+++ ..+.+..+.+.+ ++... ..+.+ ...++.
T Consensus 189 iLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~-~~d~~-----~k~~~--~~~ed~ 260 (365)
T KOG4409|consen 189 ILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRL-RPDRF-----RKFPS--LIEEDF 260 (365)
T ss_pred EEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhh-hHHHH-----Hhccc--cchhHH
Confidence 999986443211011111111111110 0111 011111111100 01100 11111 122333
Q ss_pred H-HHHhccCCC-CchHHHHHHHHhhcCCCCcc---ccCCCC--CCCEEEEecCCCCCCCchhhhhhcc--CCCCccEEEc
Q 024900 149 V-EKILQPGLE-TGAADVFLEFICYSGGPLPE---ELLPQV--KCPVLIAWGDKDPWEPIELGRAYGN--FDSVEDFIVL 219 (261)
Q Consensus 149 ~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~l~~i--~~Pvlii~G~~D~~~~~~~~~~~~~--~~~~~~~~~i 219 (261)
+ +-+...+.+ +....++-.+... .+-..+ +.+..+ +|||++|+|++|. +....+..+.+ ....++.++|
T Consensus 261 l~~YiY~~n~~~psgE~~fk~l~~~-~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dW-mD~~~g~~~~~~~~~~~~~~~~v 338 (365)
T KOG4409|consen 261 LHEYIYHCNAQNPSGETAFKNLFEP-GGWARRPMIQRLRELKKDVPVTFIYGDRDW-MDKNAGLEVTKSLMKEYVEIIIV 338 (365)
T ss_pred HHHHHHHhcCCCCcHHHHHHHHHhc-cchhhhhHHHHHHhhccCCCEEEEecCccc-ccchhHHHHHHHhhcccceEEEe
Confidence 2 222222222 2233333222211 000001 123333 5999999999985 45555544333 3344789999
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 220 PNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 220 ~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
|++||++.+|+|+.||+++..++++.
T Consensus 339 ~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 339 PGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred cCCCceeecCCHHHHHHHHHHHHhcc
Confidence 99999999999999999999998763
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=200.22 Aligned_cols=221 Identities=17% Similarity=0.242 Sum_probs=132.4
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC------CeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD------QAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|+|+++|+||||.|+.+.. ..++++++++|+.++++.+..+ +++|+||||||.|++.+|+.+|++|
T Consensus 114 ~g~~v~~~D~~G~G~S~~~~~------~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v 187 (349)
T PLN02385 114 SGYGVFAMDYPGFGLSEGLHG------YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAW 187 (349)
T ss_pred CCCEEEEecCCCCCCCCCCCC------CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchh
Confidence 479999999999999986421 2358999999999999887643 7999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|++++....... .........+...+.........+. ...... ..+.+ ...............
T Consensus 188 ~glVLi~p~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~----~~~~~---~~~~~~~~~~~~~~~ 253 (349)
T PLN02385 188 DGAILVAPMCKIADD----VVPPPLVLQILILLANLLPKAKLVP---QKDLAE----LAFRD---LKKRKMAEYNVIAYK 253 (349)
T ss_pred hheeEeccccccccc----ccCchHHHHHHHHHHHHCCCceecC---CCcccc----ccccC---HHHHHHhhcCcceeC
Confidence 999999975432110 0000111111100000000000000 000000 00000 000000000000000
Q ss_pred -CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-C-CCCccEEEcCCCCCCCCCCChhh--
Q 024900 159 -TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-F-DSVEDFIVLPNVGHCPQDEAPHL-- 233 (261)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~-~~~~~~~~i~~~gH~~~~e~p~~-- 233 (261)
.........+.... ......+.+|++|||+|+|++|.++|++.++.+.+ + .++.++++++++||.+++|+|++
T Consensus 254 ~~~~~~~~~~~l~~~--~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~ 331 (349)
T PLN02385 254 DKPRLRTAVELLRTT--QEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMI 331 (349)
T ss_pred CCcchHHHHHHHHHH--HHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhH
Confidence 00111111111100 00123477899999999999999999887766544 3 25689999999999999999987
Q ss_pred --HHHHHHHHHHhcCC
Q 024900 234 --VNPLVESFVTRHAT 247 (261)
Q Consensus 234 --~~~~l~~fl~~~~~ 247 (261)
+++.|.+||+++..
T Consensus 332 ~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 332 FQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 78889999987653
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=199.55 Aligned_cols=237 Identities=14% Similarity=0.130 Sum_probs=136.7
Q ss_pred cCCCCeEEEecCCCC-CCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEcChhHHHHHHHHhh
Q 024900 3 LAKSHRVYSIDLIGY-GYSDKPNPRDFF-------DKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~-G~S~~~~~~~~~-------~~~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~ 73 (261)
++++|+||++|+||+ |.|..+...... ....|+++++++++.++++++++++ ++|+||||||.+++.+|..
T Consensus 88 ~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~ 167 (379)
T PRK00175 88 DTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAID 167 (379)
T ss_pred CccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHh
Confidence 378999999999993 544332110000 0125899999999999999999999 5999999999999999999
Q ss_pred CcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhh--------------hh-----hhHHHH-HhhcChHHHHHH
Q 024900 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN--------------TA-----AGKLFY-KMVATSESVRNI 133 (261)
Q Consensus 74 ~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-----~~~~~~-~~~~~~~~~~~~ 133 (261)
+|++|+++|++++.+..... . ..+.+........ .+ ..+.+. ....+...+...
T Consensus 168 ~p~~v~~lvl~~~~~~~~~~-~-----~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~ 241 (379)
T PRK00175 168 YPDRVRSALVIASSARLSAQ-N-----IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEK 241 (379)
T ss_pred ChHhhhEEEEECCCcccCHH-H-----HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhh
Confidence 99999999999976432100 0 0000000000000 00 000000 000111111111
Q ss_pred HHhhcCCCCC-------C-cHHHHHH----HhccCCCCchHHHHHHHH-hhcCC----CCccccCCCCCCCEEEEecCCC
Q 024900 134 LCQCYNDTSQ-------V-TEELVEK----ILQPGLETGAADVFLEFI-CYSGG----PLPEELLPQVKCPVLIAWGDKD 196 (261)
Q Consensus 134 ~~~~~~~~~~-------~-~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~l~~i~~Pvlii~G~~D 196 (261)
+...+..... . .+.++.. .... ............. .+... ....+.+++|+||||+|+|++|
T Consensus 242 f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D 320 (379)
T PRK00175 242 FGRELQSGELPFGFDVEFQVESYLRYQGDKFVER-FDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSD 320 (379)
T ss_pred cCccccccccccCCCccchHHHHHHHHHHHHhhc-cCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCc
Confidence 1000000000 0 0111100 0000 0110000000010 11000 0113457899999999999999
Q ss_pred CCCCchhhhhhccCCCCc----cEEEcC-CCCCCCCCCChhhHHHHHHHHHHhcC
Q 024900 197 PWEPIELGRAYGNFDSVE----DFIVLP-NVGHCPQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~----~~~~i~-~~gH~~~~e~p~~~~~~l~~fl~~~~ 246 (261)
.++|++..+.+.+.++++ ++.+++ ++||++++|+|++|++.|.+||++..
T Consensus 321 ~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 321 WLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred cccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 999999887777666665 677775 99999999999999999999998754
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=186.15 Aligned_cols=207 Identities=23% Similarity=0.365 Sum_probs=130.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++++|||+||.+++.++..+|++|+++|
T Consensus 21 l~~~~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v 95 (228)
T PF12697_consen 21 LARGYRVIAFDLPGHGRSDPPPD-----YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLV 95 (228)
T ss_dssp HHTTSEEEEEECTTSTTSSSHSS-----GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred HhCCCEEEEEecCCccccccccc-----cCCcchhhhhhhhhhcccccccccccccccccccccccccccccccccccce
Confidence 56799999999999999986531 1357899999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
++++......... .......+.......... ...+. ...+.... ..+........ ..
T Consensus 96 l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~------~~~~~~~~~~~-----~~ 152 (228)
T PF12697_consen 96 LLSPPPPLPDSPS----RSFGPSFIRRLLAWRSRS---LRRLA-----SRFFYRWF------DGDEPEDLIRS-----SR 152 (228)
T ss_dssp EESESSSHHHHHC----HHHHHHHHHHHHHHHHHH---HHHHH-----HHHHHHHH------THHHHHHHHHH-----HH
T ss_pred eeccccccccccc----ccccchhhhhhhhccccc---ccccc-----cccccccc------ccccccccccc-----cc
Confidence 9998653221100 000000111111100000 00000 00000000 00011111000 00
Q ss_pred HHHHHHHhh-cCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 163 DVFLEFICY-SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 163 ~~~~~~~~~-~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
..+..+... .........++++++|+++|+|++|.+++.+..+.+.+..+++++++++++||++++|+|++|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 153 RALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred cccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 000000000 000001234567799999999999999998777777766678999999999999999999999864
|
... |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=195.28 Aligned_cols=244 Identities=18% Similarity=0.218 Sum_probs=132.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+++... ... .....+.+++++.++++.++.++++|+||||||.+++.+|..+|++|+++|
T Consensus 128 L~~~~~vi~~D~rG~G~S~~~~~~-~~~-~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lv 205 (402)
T PLN02894 128 LASRFRVIAIDQLGWGGSSRPDFT-CKS-TEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLI 205 (402)
T ss_pred HHhCCEEEEECCCCCCCCCCCCcc-ccc-HHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEE
Confidence 667899999999999999875311 000 001123457788888888899999999999999999999999999999999
Q ss_pred EeecchhhhhhccC-CCCCc--h-hhHHHHHHhh-hhhhhHHHHHhhc--ChHHHHHHHHhhcCC---CCCCcH---HHH
Q 024900 83 LLNISLRMLHIKKQ-PWYGR--P-LIRSFQNLLR-NTAAGKLFYKMVA--TSESVRNILCQCYND---TSQVTE---ELV 149 (261)
Q Consensus 83 ~~~~~~~~~~~~~~-~~~~~--~-~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~---~~~ 149 (261)
++++.......... .+... . ....+..... ............. .+..........+.. ....++ +.+
T Consensus 206 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 285 (402)
T PLN02894 206 LVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLL 285 (402)
T ss_pred EECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHH
Confidence 99875322110000 00000 0 0000000000 0000000000000 000111111111110 000111 111
Q ss_pred -HHHhccCCCCchHHHHHHHHh-hc--CCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCC
Q 024900 150 -EKILQPGLETGAADVFLEFIC-YS--GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC 225 (261)
Q Consensus 150 -~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 225 (261)
+.+...............+.. .. ......+.+.+|++||++|+|++|.+.+....+......+.+++++|+++||+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~~~~~~~~~~~~~~~~~~~i~~aGH~ 365 (402)
T PLN02894 286 TDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNYEGAVEARKRMKVPCEIIRVPQGGHF 365 (402)
T ss_pred HHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCcHHHHHHHHHcCCCCcEEEeCCCCCe
Confidence 111111111111111111110 00 00111245788999999999999987654433333334445789999999999
Q ss_pred CCCCChhhHHHHHHHHHHhcCCC
Q 024900 226 PQDEAPHLVNPLVESFVTRHATP 248 (261)
Q Consensus 226 ~~~e~p~~~~~~l~~fl~~~~~~ 248 (261)
+++|+|++|+++|.+|++...+.
T Consensus 366 ~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 366 VFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred eeccCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999887654
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=181.17 Aligned_cols=224 Identities=19% Similarity=0.253 Sum_probs=133.4
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQ-LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~d-l~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.|+++|+|+++|+||||.|+.+.. ...+++++++++ +..+++.++.++++++||||||.+++.+|.++|+.|++
T Consensus 23 ~L~~~~~v~~~d~~g~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~ 97 (251)
T TIGR03695 23 LLGPHFRCLAIDLPGHGSSQSPDE-----IERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQG 97 (251)
T ss_pred HhcccCeEEEEcCCCCCCCCCCCc-----cChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheee
Confidence 356789999999999999976531 135789999999 77888888889999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHH-hhcCCCCCCcHHHHHHHhccCCCC
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILC-QCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++++++.+.............. ...+...+.... .......... ..+......+++....+.......
T Consensus 98 lil~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (251)
T TIGR03695 98 LILESGSPGLATEEERAARRQN-DEQLAQRFEQEG----------LEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLAN 166 (251)
T ss_pred eEEecCCCCcCchHhhhhhhhc-chhhhhHHHhcC----------ccHHHHHHhcCceeeecccCChHHhHHHHHhcccc
Confidence 9999875432110000000000 000000000000 0000000000 001010111111111111110000
Q ss_pred --c-hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 160 --G-AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 160 --~-~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
. ....+... .........+.+.+++||+++|+|++|..++ +..+.+.+..++++++.++++||++++|+|+++++
T Consensus 167 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~ 244 (251)
T TIGR03695 167 NPEGLAKMLRAT-GLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAK 244 (251)
T ss_pred cchHHHHHHHHh-hhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHH
Confidence 0 01111110 0000011123467899999999999998664 44555666667789999999999999999999999
Q ss_pred HHHHHHH
Q 024900 237 LVESFVT 243 (261)
Q Consensus 237 ~l~~fl~ 243 (261)
.|.+|++
T Consensus 245 ~i~~~l~ 251 (251)
T TIGR03695 245 ILLAFLE 251 (251)
T ss_pred HHHHHhC
Confidence 9999983
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-26 Score=193.75 Aligned_cols=227 Identities=18% Similarity=0.231 Sum_probs=136.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC------CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|+|+++|+||||.|+.+.. ...+++.+++|+.++++.+.. .+++|+||||||.+++.++..+|++|
T Consensus 86 ~Gy~V~~~D~rGhG~S~~~~~------~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v 159 (330)
T PLN02298 86 MGFACFALDLEGHGRSEGLRA------YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGF 159 (330)
T ss_pred CCCEEEEecCCCCCCCCCccc------cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccc
Confidence 579999999999999974321 235789999999999998754 36999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH--hccC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI--LQPG 156 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 156 (261)
+++|++++...........+ .. ..+..... .++........ . ... ......+. ...+ ..+.
T Consensus 160 ~~lvl~~~~~~~~~~~~~~~---~~-~~~~~~~~------~~~~~~~~~~~-~----~~~-~~~~~~~~-~~~~~~~~~~ 222 (330)
T PLN02298 160 DGAVLVAPMCKISDKIRPPW---PI-PQILTFVA------RFLPTLAIVPT-A----DLL-EKSVKVPA-KKIIAKRNPM 222 (330)
T ss_pred eeEEEecccccCCcccCCch---HH-HHHHHHHH------HHCCCCccccC-C----Ccc-cccccCHH-HHHHHHhCcc
Confidence 99999987543211000000 00 00000000 00000000000 0 000 00000000 0000 0000
Q ss_pred -CCC-chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-C-CCCccEEEcCCCCCCCCCCChh
Q 024900 157 -LET-GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-F-DSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 157 -~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~-~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
... ........+.... ......+.+|++|||||+|++|.++|.+..+.+.+ + .++.++++++++||.++.++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd 300 (330)
T PLN02298 223 RYNGKPRLGTVVELLRVT--DYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPD 300 (330)
T ss_pred ccCCCccHHHHHHHHHHH--HHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCH
Confidence 000 0001111111100 00124577899999999999999999988776543 3 3568999999999999999986
Q ss_pred h----HHHHHHHHHHhcCCCCCcccccc
Q 024900 233 L----VNPLVESFVTRHATPPASVSAAS 256 (261)
Q Consensus 233 ~----~~~~l~~fl~~~~~~~~~~~~~~ 256 (261)
. +.+.+.+||.+...+.++.+.-|
T Consensus 301 ~~~~~~~~~i~~fl~~~~~~~~~~~~~~ 328 (330)
T PLN02298 301 ENIEIVRRDILSWLNERCTGKATPSEDS 328 (330)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCcccc
Confidence 4 66788899999888777776555
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.3e-26 Score=172.66 Aligned_cols=205 Identities=24% Similarity=0.274 Sum_probs=141.7
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
++|+++|.||||.|..|. |.+.. . -...-+++..++|++|..+++.++|||-||.-++-.|+++++.|.++|++++
T Consensus 72 ~TivawDPpGYG~SrPP~-Rkf~~-~--ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga 147 (277)
T KOG2984|consen 72 VTIVAWDPPGYGTSRPPE-RKFEV-Q--FFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGA 147 (277)
T ss_pred eEEEEECCCCCCCCCCCc-ccchH-H--HHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecc
Confidence 899999999999998664 33211 1 1223356667889999999999999999999999999999999999999987
Q ss_pred chhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHH
Q 024900 87 SLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL 166 (261)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (261)
...... .+....+.+++...-.+.++ +-+...| ..+.+.+.+. .+.+...
T Consensus 148 ~ayvn~------~~~ma~kgiRdv~kWs~r~R-------------~P~e~~Y------g~e~f~~~wa-----~wvD~v~ 197 (277)
T KOG2984|consen 148 AAYVNH------LGAMAFKGIRDVNKWSARGR-------------QPYEDHY------GPETFRTQWA-----AWVDVVD 197 (277)
T ss_pred cceecc------hhHHHHhchHHHhhhhhhhc-------------chHHHhc------CHHHHHHHHH-----HHHHHHH
Confidence 644321 11111122221111000000 0011111 1222222211 1223333
Q ss_pred HHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 167 EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 167 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
.+..+-++++++-.+.+|+|||||++|++|++++....-.+....+.+++.++|.++|..|+.-+++||..+.+|++++
T Consensus 198 qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 198 QFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred HHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 4444455566677899999999999999999999887777777778899999999999999999999999999999875
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=184.20 Aligned_cols=220 Identities=17% Similarity=0.242 Sum_probs=130.6
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEee
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 85 (261)
+|+|+++|+||||.|..+... ...++++++++|+.+++++++.++++++||||||.+++.+|..+|++|+++|+++
T Consensus 53 g~~vi~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (288)
T TIGR01250 53 GREVIMYDQLGCGYSDQPDDS----DELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISS 128 (288)
T ss_pred CCEEEEEcCCCCCCCCCCCcc----cccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEec
Confidence 799999999999999865311 1147899999999999999999999999999999999999999999999999988
Q ss_pred cchhhhhhccC-----CCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhc---CCCCCCcHHHHHHHhccCC
Q 024900 86 ISLRMLHIKKQ-----PWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY---NDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 86 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 157 (261)
+.......... ..........+...... .....+. ......... ........+.........
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 198 (288)
T TIGR01250 129 MLDSAPEYVKELNRLRKELPPEVRAAIKRCEAS--------GDYDNPE-YQEAVEVFYHHLLCRTRKWPEALKHLKSGM- 198 (288)
T ss_pred ccccchHHHHHHHHHHhhcChhHHHHHHHHHhc--------cCcchHH-HHHHHHHHHHHhhcccccchHHHHHHhhcc-
Confidence 64321100000 00000000000000000 0000000 000000000 000000111111111000
Q ss_pred CCchHHHHHHHHh-----h---cCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCC
Q 024900 158 ETGAADVFLEFIC-----Y---SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 158 ~~~~~~~~~~~~~-----~---~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 229 (261)
....+..+.. . .......+.+.+++||+++++|++|.+ +++..+.+.+..++.++++++++||++++|
T Consensus 199 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 274 (288)
T TIGR01250 199 ---NTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIE 274 (288)
T ss_pred ---CHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccC
Confidence 0000000000 0 000011234678999999999999985 456566666666778999999999999999
Q ss_pred ChhhHHHHHHHHHH
Q 024900 230 APHLVNPLVESFVT 243 (261)
Q Consensus 230 ~p~~~~~~l~~fl~ 243 (261)
+|++|++.|..|++
T Consensus 275 ~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 275 DPEVYFKLLSDFIR 288 (288)
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-25 Score=184.55 Aligned_cols=213 Identities=17% Similarity=0.234 Sum_probs=126.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.+|+|+++|+||||.|+.... ...++.++++|+.+.+..+ ..++++|+||||||.+++.+|..+|++|++
T Consensus 51 ~g~~via~D~~G~G~S~~~~~------~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~ 124 (276)
T PHA02857 51 LGILVFSHDHIGHGRSNGEKM------MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTA 124 (276)
T ss_pred CCCEEEEccCCCCCCCCCccC------CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccce
Confidence 479999999999999975321 2246777788887777654 235799999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++.... ... .....+................. .+... .....+.......+.....
T Consensus 125 lil~~p~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~~~~~~~~ 184 (276)
T PHA02857 125 MILMSPLVNA---EAV-----PRLNLLAAKLMGIFYPNKIVGKL-CPESV-----------SRDMDEVYKYQYDPLVNHE 184 (276)
T ss_pred EEEecccccc---ccc-----cHHHHHHHHHHHHhCCCCccCCC-CHhhc-----------cCCHHHHHHHhcCCCccCC
Confidence 9999975321 000 01111111100000000000000 00000 0000111111111110000
Q ss_pred --hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCCCCCCCCCCCh---hhH
Q 024900 161 --AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQDEAP---HLV 234 (261)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p---~~~ 234 (261)
............ ....+.+.++++|||+|+|++|.++|++.++.+.+ +.++.++.+++++||.++.|++ +++
T Consensus 185 ~~~~~~~~~~~~~~--~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~ 262 (276)
T PHA02857 185 KIKAGFASQVLKAT--NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSV 262 (276)
T ss_pred CccHHHHHHHHHHH--HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHH
Confidence 000111111100 01124578899999999999999999988776654 4456799999999999999887 468
Q ss_pred HHHHHHHHHhc
Q 024900 235 NPLVESFVTRH 245 (261)
Q Consensus 235 ~~~l~~fl~~~ 245 (261)
.+.+.+||+++
T Consensus 263 ~~~~~~~l~~~ 273 (276)
T PHA02857 263 MKEIETWIFNR 273 (276)
T ss_pred HHHHHHHHHHh
Confidence 88888999874
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=186.81 Aligned_cols=212 Identities=25% Similarity=0.357 Sum_probs=132.0
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|.++|+|+++|+||||.|.... ..+++.++++++.++++.++..+++++||||||.+++.+|..+|+++.++|
T Consensus 154 l~~~~~v~~~d~~g~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv 226 (371)
T PRK14875 154 LAAGRPVIALDLPGHGASSKAV-------GAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLT 226 (371)
T ss_pred HhcCCEEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEE
Confidence 5677999999999999996432 246899999999999999998999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
++++...... ....+...+....... .+...+...+.+......................
T Consensus 227 ~~~~~~~~~~------~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
T PRK14875 227 LIAPAGLGPE------INGDYIDGFVAAESRR--------------ELKPVLELLFADPALVTRQMVEDLLKYKRLDGVD 286 (371)
T ss_pred EECcCCcCcc------cchhHHHHhhcccchh--------------HHHHHHHHHhcChhhCCHHHHHHHHHHhccccHH
Confidence 9986532110 0000110000000000 0000000001111111122221111100000000
Q ss_pred HHHHHHHh--hcC---CCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 163 DVFLEFIC--YSG---GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 163 ~~~~~~~~--~~~---~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
..+..+.. +.. .......+.+++||+|+|+|++|..+|.+..+. +.++.++.+++++||++++|+|+++++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~---l~~~~~~~~~~~~gH~~~~e~p~~~~~~ 363 (371)
T PRK14875 287 DALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQG---LPDGVAVHVLPGAGHMPQMEAAADVNRL 363 (371)
T ss_pred HHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhh---ccCCCeEEEeCCCCCChhhhCHHHHHHH
Confidence 11111100 000 000123467889999999999999998765443 3345789999999999999999999999
Q ss_pred HHHHHHh
Q 024900 238 VESFVTR 244 (261)
Q Consensus 238 l~~fl~~ 244 (261)
|.+|+++
T Consensus 364 i~~fl~~ 370 (371)
T PRK14875 364 LAEFLGK 370 (371)
T ss_pred HHHHhcc
Confidence 9999975
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-25 Score=189.53 Aligned_cols=230 Identities=13% Similarity=0.085 Sum_probs=130.4
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
++.+|+|+++|+||||.|+++.... .....++++++++|+..+++.+ +..+++++||||||.|++.+|+.+|++|
T Consensus 78 ~~~g~~v~~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v 156 (330)
T PRK10749 78 FHLGYDVLIIDHRGQGRSGRLLDDP-HRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVF 156 (330)
T ss_pred HHCCCeEEEEcCCCCCCCCCCCCCC-CcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCc
Confidence 3578999999999999998642110 0112368999999999999887 5678999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhc-CCCCCCcH----HHHHHHh
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY-NDTSQVTE----ELVEKIL 153 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~ 153 (261)
+++|++++...... ..+ ......+.............+. ....... ...+ .+.-...+ +.++.+.
T Consensus 157 ~~lvl~~p~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~ 226 (330)
T PRK10749 157 DAIALCAPMFGIVL--PLP---SWMARRILNWAEGHPRIRDGYA-IGTGRWR----PLPFAINVLTHSRERYRRNLRFYA 226 (330)
T ss_pred ceEEEECchhccCC--CCC---cHHHHHHHHHHHHhcCCCCcCC-CCCCCCC----CCCcCCCCCCCCHHHHHHHHHHHH
Confidence 99999987532110 000 0111111111000000000000 0000000 0000 00000001 1111111
Q ss_pred ccC-CCC--chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC-------CCccEEEcCCCC
Q 024900 154 QPG-LET--GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-------SVEDFIVLPNVG 223 (261)
Q Consensus 154 ~~~-~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-------~~~~~~~i~~~g 223 (261)
... ... ............. ......+.++++|||+|+|++|.+++++.++.+.+.. ++++++++|++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gag 304 (330)
T PRK10749 227 DDPELRVGGPTYHWVRESILAG--EQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAY 304 (330)
T ss_pred hCCCcccCCCcHHHHHHHHHHH--HHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCc
Confidence 111 100 0011111111000 0001346789999999999999999998766543321 346899999999
Q ss_pred CCCCCCCh---hhHHHHHHHHHHhc
Q 024900 224 HCPQDEAP---HLVNPLVESFVTRH 245 (261)
Q Consensus 224 H~~~~e~p---~~~~~~l~~fl~~~ 245 (261)
|.++.|.+ +++.+.+.+|++++
T Consensus 305 H~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 305 HEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred chhhhCCcHHHHHHHHHHHHHHhhc
Confidence 99999887 56778888899765
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-25 Score=181.58 Aligned_cols=219 Identities=21% Similarity=0.287 Sum_probs=129.7
Q ss_pred CeEEEecCCCCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 7 HRVYSIDLIGYGYSDK---PNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~---~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
|+|+++|+||+|.|+. .. ...|+..++++++..+++.++.++++++||||||.+++.+|+.+|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPD------FPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSG------SCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCC------cccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 7999999999999984 22 25689999999999999999999999999999999999999999999999999
Q ss_pred eecch--hhhhhccCCCCCc-hhhHHHHHHhhh--hhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 84 LNISL--RMLHIKKQPWYGR-PLIRSFQNLLRN--TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 84 ~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
++++. ..... . +...+ .....+...... .............. .......... ................
T Consensus 75 ~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~- 147 (230)
T PF00561_consen 75 ISPPPDLPDGLW-N-RIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQ---FFAYDREFVE-DFLKQFQSQQYARFAE- 147 (230)
T ss_dssp ESESSHHHHHHH-H-HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH-THHHHHHHHHHHHTCH-
T ss_pred Eeeeccchhhhh-H-HHHhhhhhhhhHHHhhhccccccchhhhhhhhhh---eeeccCcccc-chhhccchhhhhHHHH-
Confidence 99851 11000 0 00000 000000000000 00000000000000 0000000000 0000000000000000
Q ss_pred CchHHHHHH-HH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 159 TGAADVFLE-FI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 159 ~~~~~~~~~-~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
......... .. ..... .....+..|++|+++++|++|.++|++....+.+..|+.+++.++++||+.+++.|+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~ 226 (230)
T PF00561_consen 148 TDAFDNMFWNALGYFSVW-DPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNE 226 (230)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHH
T ss_pred HHHHhhhccccccccccc-cccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhh
Confidence 000000000 00 00000 0123466799999999999999999998877777788899999999999999999999999
Q ss_pred HHH
Q 024900 237 LVE 239 (261)
Q Consensus 237 ~l~ 239 (261)
+|.
T Consensus 227 ~i~ 229 (230)
T PF00561_consen 227 III 229 (230)
T ss_dssp HHH
T ss_pred hhc
Confidence 885
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-24 Score=184.48 Aligned_cols=235 Identities=15% Similarity=0.148 Sum_probs=138.1
Q ss_pred CCCeEEEecCCCCCCCCCC-------C---C---CCCC-CCCCCCHHHHHHHHHHHHHHhcCCCeE-EEEcChhHHHHHH
Q 024900 5 KSHRVYSIDLIGYGYSDKP-------N---P---RDFF-DKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQ 69 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~-------~---~---~~~~-~~~~~~~~~~a~dl~~~~~~l~~~~~~-lvGhS~Gg~va~~ 69 (261)
+.|.||++|..|-|.|..| . + ++.. +...|++.++++++..+++++++++++ +|||||||+++++
T Consensus 98 ~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~ 177 (389)
T PRK06765 98 NKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQE 177 (389)
T ss_pred CceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHH
Confidence 5799999999998764322 0 1 0000 123589999999999999999999987 9999999999999
Q ss_pred HHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHh-hhh------------h-----hh-HHHHHhhcChHHH
Q 024900 70 AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLL-RNT------------A-----AG-KLFYKMVATSESV 130 (261)
Q Consensus 70 ~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------~-----~~-~~~~~~~~~~~~~ 130 (261)
+|.+||++|+++|++++.++.. ++....+.+.....+ ..+ + .. ........+++.+
T Consensus 178 ~a~~~P~~v~~lv~ia~~~~~~-----~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~ 252 (389)
T PRK06765 178 WAVHYPHMVERMIGVIGNPQND-----AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFY 252 (389)
T ss_pred HHHHChHhhheEEEEecCCCCC-----hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999998764321 110001111111101 000 0 00 0001111122222
Q ss_pred HHHHHhhcCCC--------CCCc-HHHHHHHhccCCCCchHHHHHHHH-hhcCCC------CccccCCCCCCCEEEEecC
Q 024900 131 RNILCQCYNDT--------SQVT-EELVEKILQPGLETGAADVFLEFI-CYSGGP------LPEELLPQVKCPVLIAWGD 194 (261)
Q Consensus 131 ~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~l~~i~~Pvlii~G~ 194 (261)
...+....... ...+ +.+++.........-....+..+. .+...+ ...+.+.+|++|||+|+|+
T Consensus 253 ~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~ 332 (389)
T PRK06765 253 ETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCK 332 (389)
T ss_pred HHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeC
Confidence 11111000000 0000 122222211111111111111111 111111 1234578999999999999
Q ss_pred CCCCCCchhhhhhccCCC----CccEEEcCC-CCCCCCCCChhhHHHHHHHHHHh
Q 024900 195 KDPWEPIELGRAYGNFDS----VEDFIVLPN-VGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 195 ~D~~~~~~~~~~~~~~~~----~~~~~~i~~-~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
+|.++|++..+.+.+..+ ++++++|++ +||++++|+|++|++.|.+||++
T Consensus 333 ~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 333 QDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 999999887776665443 688999985 99999999999999999999965
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-24 Score=176.89 Aligned_cols=215 Identities=20% Similarity=0.188 Sum_probs=128.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
.+|+|+++|+||||.|.... ...++++++++++.++++++. .++++||||||||.+++.++..+|++|+++|+
T Consensus 44 ~g~~vi~~dl~g~G~s~~~~------~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~ 117 (273)
T PLN02211 44 SGYKVTCIDLKSAGIDQSDA------DSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVY 117 (273)
T ss_pred CCCEEEEecccCCCCCCCCc------ccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEE
Confidence 57999999999999985322 124799999999999999985 58999999999999999999999999999999
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhh---hHHHH------HhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA---GKLFY------KMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (261)
+++.....+.... ......+......... ..... ......+....++ +.+.+....+.......
T Consensus 118 ~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 190 (273)
T PLN02211 118 VAATMLKLGFQTD----EDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKIL---YQMSPQEDSTLAAMLLR 190 (273)
T ss_pred eccccCCCCCCHH----HHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHH---hcCCCHHHHHHHHHhcC
Confidence 9764321100000 0000000000000000 00000 0000011111110 11100000000111111
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCC-CCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhh
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
+ ..... +.. ....+...++ ++|+++|+|++|..+|++..+.+.+..+..+++.++ +||.|++++|++
T Consensus 191 ~----~~~~~------~~~-~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~ 258 (273)
T PLN02211 191 P----GPILA------LRS-ARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFL 258 (273)
T ss_pred C----cCccc------ccc-ccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHH
Confidence 0 00000 000 0111223455 899999999999999999888887766677999996 899999999999
Q ss_pred HHHHHHHHHHh
Q 024900 234 VNPLVESFVTR 244 (261)
Q Consensus 234 ~~~~l~~fl~~ 244 (261)
|+.+|.++...
T Consensus 259 ~~~~i~~~a~~ 269 (273)
T PLN02211 259 LFGLLIKAAAS 269 (273)
T ss_pred HHHHHHHHHHH
Confidence 99999988654
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-24 Score=212.09 Aligned_cols=234 Identities=20% Similarity=0.196 Sum_probs=134.4
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.|+++|+|+++|+||||.|..+.... ......|+++.+++++.+++++++.++++|+||||||.|++.+|.++|++|++
T Consensus 1393 ~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~ 1472 (1655)
T PLN02980 1393 AISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEG 1472 (1655)
T ss_pred HHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCE
Confidence 36778999999999999997542100 00113578999999999999999999999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchh-hHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 81 MILLNISLRMLHIKKQPWYGRPL-IRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
+|++++.+....... +..+.. .......+..... ..+..........+ ....... -.+.+..........
T Consensus 1473 lVlis~~p~~~~~~~--~~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~ 1543 (1655)
T PLN02980 1473 AVIISGSPGLKDEVA--RKIRSAKDDSRARMLIDHGL-EIFLENWYSGELWK-----SLRNHPH-FNKIVASRLLHKDVP 1543 (1655)
T ss_pred EEEECCCCccCchHH--HHHHhhhhhHHHHHHHhhhH-HHHHHHhccHHHhh-----hhccCHH-HHHHHHHHHhcCCHH
Confidence 999987542210000 000000 0000000000000 00100000000000 0000000 001111111100000
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC------------ccEEEcCCCCCCCC
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV------------EDFIVLPNVGHCPQ 227 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------------~~~~~i~~~gH~~~ 227 (261)
.....+..+..... ....+.+++|++|||+|+|++|..++ +.++.+.+..++ +++++|+++||+++
T Consensus 1544 ~~~~~l~~~~~~~~-~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~ 1621 (1655)
T PLN02980 1544 SLAKLLSDLSIGRQ-PSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVH 1621 (1655)
T ss_pred HHHHHHHHhhhccc-chHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchH
Confidence 00011111100001 11124588999999999999999775 433344332222 48999999999999
Q ss_pred CCChhhHHHHHHHHHHhcC
Q 024900 228 DEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 228 ~e~p~~~~~~l~~fl~~~~ 246 (261)
+|+|++|++.|.+||++..
T Consensus 1622 lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1622 LENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred HHCHHHHHHHHHHHHHhcc
Confidence 9999999999999998754
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-23 Score=179.91 Aligned_cols=226 Identities=16% Similarity=0.222 Sum_probs=129.2
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC----CCeEEEEcChhHHHHHHHHhhCccc-
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPEI- 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~- 77 (261)
+.++|+|+++|+||||.|....+ ..| ...+++|+.++++.+.. .+++++||||||.+++.++..+|++
T Consensus 126 ~~~g~~vv~~d~rG~G~s~~~~~------~~~-~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~ 198 (388)
T PLN02511 126 RSKGWRVVVFNSRGCADSPVTTP------QFY-SASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENC 198 (388)
T ss_pred HHCCCEEEEEecCCCCCCCCCCc------CEE-cCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCC
Confidence 46889999999999999975432 122 35667888888888765 5899999999999999999999987
Q ss_pred -ccceEEeecchhhh-hhcc-CCCCCchhhHHHHHHhhhhhh-hHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 024900 78 -CRGMILLNISLRML-HIKK-QPWYGRPLIRSFQNLLRNTAA-GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (261)
Q Consensus 78 -v~~lv~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
|.++++++++.... .... .......+...+...+++... ....+...........+. ......++-+.+.
T Consensus 199 ~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~fd~~~t 272 (388)
T PLN02511 199 PLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVA------NAKTVRDFDDGLT 272 (388)
T ss_pred CceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHH------hCCCHHHHHHhhh
Confidence 88888887653221 0000 000000000000000000000 000000000000000000 0000011111111
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh-hhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
.+.......+.|+ .. ......+++|++|||+|+|++|+++|.+.. ....+..+++++++++++||++++|+|+
T Consensus 273 ~~~~gf~~~~~yy---~~---~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~ 346 (388)
T PLN02511 273 RVSFGFKSVDAYY---SN---SSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPE 346 (388)
T ss_pred hhcCCCCCHHHHH---HH---cCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCC
Confidence 1111111112121 10 012346889999999999999999987754 3344557789999999999999999998
Q ss_pred h------HHHHHHHHHHhcCC
Q 024900 233 L------VNPLVESFVTRHAT 247 (261)
Q Consensus 233 ~------~~~~l~~fl~~~~~ 247 (261)
. +++.+.+|++....
T Consensus 347 ~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 347 APFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CCCCCccHHHHHHHHHHHHHH
Confidence 6 48999999976543
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.8e-23 Score=173.19 Aligned_cols=80 Identities=20% Similarity=0.211 Sum_probs=70.2
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+++|+|+++|+||||.|+.+.. ...++..++++|+..++++++.++++++||||||.+++.++..+|++|+++|+
T Consensus 51 ~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl 125 (306)
T TIGR01249 51 PETYRIVLFDQRGCGKSTPHAC-----LEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVL 125 (306)
T ss_pred ccCCEEEEECCCCCCCCCCCCC-----cccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhhee
Confidence 4679999999999999985421 12367889999999999999999999999999999999999999999999999
Q ss_pred eecch
Q 024900 84 LNISL 88 (261)
Q Consensus 84 ~~~~~ 88 (261)
+++..
T Consensus 126 ~~~~~ 130 (306)
T TIGR01249 126 RGIFL 130 (306)
T ss_pred ecccc
Confidence 98753
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-23 Score=186.69 Aligned_cols=232 Identities=17% Similarity=0.185 Sum_probs=130.1
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEcChhHHHHHHHHhh--Ccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVM--EPEIC 78 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~--~p~~v 78 (261)
.|+++|+|+++|+||||.|+.+.. ...|+++++++|+.+++++++.++ ++|+||||||.+++.++.. +|+++
T Consensus 47 ~L~~~~~Vi~~D~~G~G~S~~~~~-----~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v 121 (582)
T PRK05855 47 LLADRFRVVAYDVRGAGRSSAPKR-----TAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRI 121 (582)
T ss_pred HhhcceEEEEecCCCCCCCCCCCc-----ccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhh
Confidence 467899999999999999986532 135899999999999999998765 9999999999999998876 35666
Q ss_pred cceEEeecchhhh--h-hccCC--CCCchhhHHHHHHhhhhhh--------hHHHHHhhcChHHHHHHHHhhcCCCCCCc
Q 024900 79 RGMILLNISLRML--H-IKKQP--WYGRPLIRSFQNLLRNTAA--------GKLFYKMVATSESVRNILCQCYNDTSQVT 145 (261)
Q Consensus 79 ~~lv~~~~~~~~~--~-~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (261)
..++.++++.... . ..... .........+......... ....+.... .......... ... ....
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~~ 198 (582)
T PRK05855 122 ASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGL-GRAWPRLLRR-VEG-TPVD 198 (582)
T ss_pred hhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccch-hhHHHHhhhh-ccC-CCcc
Confidence 6666665432100 0 00000 0000000001000000000 000000000 0000000000 000 0000
Q ss_pred HHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCC
Q 024900 146 EELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC 225 (261)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 225 (261)
........ .... .....+..... .......+..+++|+++|+|++|.++|.+..+.+.+..++.+++.++ +||+
T Consensus 199 ~~~~~~~~-~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~ 272 (582)
T PRK05855 199 PIPTQTTL-SDGA-HGVKLYRANMI---RSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHW 272 (582)
T ss_pred hhhhhhhh-cccc-chHHHHHhhhh---hhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCc
Confidence 00000000 0000 00111110000 00112235668999999999999999988777777666777887775 6999
Q ss_pred CCCCChhhHHHHHHHHHHhcCC
Q 024900 226 PQDEAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 226 ~~~e~p~~~~~~l~~fl~~~~~ 247 (261)
+++|+|++|++.|.+|+.+...
T Consensus 273 ~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 273 LPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred chhhChhHHHHHHHHHHHhccC
Confidence 9999999999999999987543
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-22 Score=173.25 Aligned_cols=216 Identities=18% Similarity=0.201 Sum_probs=128.0
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC----CCeEEEEcChhHHHHHHHHhhCcc---
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPE--- 76 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~--- 76 (261)
+.+|+|+++|+||||.|+.... ..++++.+++|+.++++.+.. .+++++||||||.+++.++. +|+
T Consensus 161 ~~Gy~V~~~D~rGhG~S~~~~~------~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~ 233 (395)
T PLN02652 161 SCGFGVYAMDWIGHGGSDGLHG------YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIED 233 (395)
T ss_pred HCCCEEEEeCCCCCCCCCCCCC------CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCccc
Confidence 3689999999999999986421 235788999999999888763 37999999999999998764 664
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHH-HHHHhcc
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEEL-VEKILQP 155 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 155 (261)
+|+++|+.++...... .......+..+... ......+..... .......+++. ...+..+
T Consensus 234 ~v~glVL~sP~l~~~~-------~~~~~~~~~~l~~~-~~p~~~~~~~~~-----------~~~~~s~~~~~~~~~~~dp 294 (395)
T PLN02652 234 KLEGIVLTSPALRVKP-------AHPIVGAVAPIFSL-VAPRFQFKGANK-----------RGIPVSRDPAALLAKYSDP 294 (395)
T ss_pred ccceEEEECccccccc-------chHHHHHHHHHHHH-hCCCCcccCccc-----------ccCCcCCCHHHHHHHhcCC
Confidence 8999999886532210 00111111000000 000000000000 00000001111 1111111
Q ss_pred CCCCchH--HHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh-ccC-CCCccEEEcCCCCCCCCCC-C
Q 024900 156 GLETGAA--DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNF-DSVEDFIVLPNVGHCPQDE-A 230 (261)
Q Consensus 156 ~~~~~~~--~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~-~~~~~~~~i~~~gH~~~~e-~ 230 (261)
....+.. .....+.... ....+.+.+|++|+|+|+|++|.++|++.++.+ .+. .++.+++++++++|.++.| +
T Consensus 295 ~~~~g~i~~~~~~~~~~~~--~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~ 372 (395)
T PLN02652 295 LVYTGPIRVRTGHEILRIS--SYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPE 372 (395)
T ss_pred CcccCCchHHHHHHHHHHH--HHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCC
Confidence 1111111 1111111110 001234678999999999999999998877665 333 2357899999999998766 7
Q ss_pred hhhHHHHHHHHHHhcCC
Q 024900 231 PHLVNPLVESFVTRHAT 247 (261)
Q Consensus 231 p~~~~~~l~~fl~~~~~ 247 (261)
|+++.+.+.+||..+..
T Consensus 373 ~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 373 REEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999987654
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-21 Score=155.67 Aligned_cols=219 Identities=16% Similarity=0.164 Sum_probs=135.6
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCCeEEEEcChhH-HHHHHHHhhCcccccce
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGG-LVGLQAAVMEPEICRGM 81 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~----~~~~~lvGhS~Gg-~va~~~a~~~p~~v~~l 81 (261)
..||+.|+|-||.|.+. ..++...+++|+..||+..+ ..+++++|||||| -+++..++.+|+.+..+
T Consensus 81 ~~v~~vd~RnHG~Sp~~--------~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rl 152 (315)
T KOG2382|consen 81 RDVYAVDVRNHGSSPKI--------TVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERL 152 (315)
T ss_pred CceEEEecccCCCCccc--------cccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCccccee
Confidence 58999999999999764 23678999999999999885 4689999999999 78888888899999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC--
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET-- 159 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 159 (261)
|+++.++.... .....+.+-+..+..-+... .. .....+..+.+.+..+.+ .-..++...+.++...
T Consensus 153 iv~D~sP~~~~-----~~~~e~~e~i~~m~~~d~~~-~~--~~~rke~~~~l~~~~~d~---~~~~fi~~nl~~~~~~~s 221 (315)
T KOG2382|consen 153 IVEDISPGGVG-----RSYGEYRELIKAMIQLDLSI-GV--SRGRKEALKSLIEVGFDN---LVRQFILTNLKKSPSDGS 221 (315)
T ss_pred EEEecCCccCC-----cccchHHHHHHHHHhccccc-cc--cccHHHHHHHHHHHhcch---HHHHHHHHhcCcCCCCCc
Confidence 99998764211 11111122222211111100 00 000011111111111100 0001111112110000
Q ss_pred ----chHHHHHHHHhh-cCCCCccccC--CCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 160 ----GAADVFLEFICY-SGGPLPEELL--PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 160 ----~~~~~~~~~~~~-~~~~~~~~~l--~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
.-.+...++... ... ..+..+ ...+.|||+|.|.++.+++.+.-..+..+.|..++++|++|||+.|+|+|+
T Consensus 222 ~~w~~nl~~i~~~~~~~~~~-s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~ 300 (315)
T KOG2382|consen 222 FLWRVNLDSIASLLDEYEIL-SYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPE 300 (315)
T ss_pred eEEEeCHHHHHHHHHHHHhh-cccccccccccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHH
Confidence 001222222111 000 011112 567899999999999999998877788888889999999999999999999
Q ss_pred hHHHHHHHHHHhc
Q 024900 233 LVNPLVESFVTRH 245 (261)
Q Consensus 233 ~~~~~l~~fl~~~ 245 (261)
+|.++|.+|++.+
T Consensus 301 ~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 301 EFIESISEFLEEP 313 (315)
T ss_pred HHHHHHHHHhccc
Confidence 9999999999764
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-20 Score=157.15 Aligned_cols=227 Identities=19% Similarity=0.259 Sum_probs=132.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC----CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
...+|.||++|+||||.|.+ ..+. ..-++.+|.+|+..+++.... .+++++||||||.|++.++.+++..|
T Consensus 58 ~~~G~~V~~~D~RGhG~S~r-~~rg----~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i 132 (298)
T COG2267 58 AARGFDVYALDLRGHGRSPR-GQRG----HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRI 132 (298)
T ss_pred HhCCCEEEEecCCCCCCCCC-CCcC----CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccc
Confidence 35789999999999999973 1111 122489999999999988753 68999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC-
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL- 157 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 157 (261)
+++|+.++.+.... . .... .+...... ...+.. ..+..... . ..........-+++.++.+.....
T Consensus 133 ~~~vLssP~~~l~~-----~--~~~~-~~~~~~~~-~~~~~~-p~~~~~~~-~--~~~~~~~~~sr~~~~~~~~~~dP~~ 199 (298)
T COG2267 133 DGLVLSSPALGLGG-----A--ILRL-ILARLALK-LLGRIR-PKLPVDSN-L--LEGVLTDDLSRDPAEVAAYEADPLI 199 (298)
T ss_pred cEEEEECccccCCh-----h--HHHH-HHHHHhcc-cccccc-cccccCcc-c--ccCcCcchhhcCHHHHHHHhcCCcc
Confidence 99999988654321 0 0000 00000000 000000 00000000 0 000000000012333333332221
Q ss_pred CCc-hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCC-chh-hhhhccC-CCCccEEEcCCCCCCCCCCCh--
Q 024900 158 ETG-AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP-IEL-GRAYGNF-DSVEDFIVLPNVGHCPQDEAP-- 231 (261)
Q Consensus 158 ~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~-~~~-~~~~~~~-~~~~~~~~i~~~gH~~~~e~p-- 231 (261)
..+ .......................+++|||+++|++|.+++ .+. .+.+.+. .++.++++++|+.|.++.|.+
T Consensus 200 ~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~ 279 (298)
T COG2267 200 GVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRA 279 (298)
T ss_pred ccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchH
Confidence 211 1111111111111111122356789999999999999998 454 3445544 566799999999999886554
Q ss_pred -hhHHHHHHHHHHhcCC
Q 024900 232 -HLVNPLVESFVTRHAT 247 (261)
Q Consensus 232 -~~~~~~l~~fl~~~~~ 247 (261)
+++.+.+.+|+.+...
T Consensus 280 r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 280 REEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 6788888899987543
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-19 Score=157.80 Aligned_cols=190 Identities=16% Similarity=0.166 Sum_probs=120.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
+.+|+|+++|+||||.|..... ..+......++.+.+... +.+++.++||||||.+++.+|..+|++|++
T Consensus 220 ~~Gy~vl~~D~pG~G~s~~~~~-------~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a 292 (414)
T PRK05077 220 PRGIAMLTIDMPSVGFSSKWKL-------TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKA 292 (414)
T ss_pred hCCCEEEEECCCCCCCCCCCCc-------cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceE
Confidence 4679999999999999965321 123444455666666554 457899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++..... .. . ...... . +......+....+. ...+.+.+...+.
T Consensus 293 ~V~~~~~~~~~--~~-----~--~~~~~~----~------------p~~~~~~la~~lg~-~~~~~~~l~~~l~------ 340 (414)
T PRK05077 293 VACLGPVVHTL--LT-----D--PKRQQQ----V------------PEMYLDVLASRLGM-HDASDEALRVELN------ 340 (414)
T ss_pred EEEECCccchh--hc-----c--hhhhhh----c------------hHHHHHHHHHHhCC-CCCChHHHHHHhh------
Confidence 99998753210 00 0 000000 0 00000001111110 0111121111110
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
.+... .......++++|+|+|+|++|.++|++.++.+.+..++++++.||++ ++++.|++++..+.+
T Consensus 341 ---------~~sl~-~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~ 407 (414)
T PRK05077 341 ---------RYSLK-VQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISD 407 (414)
T ss_pred ---------hccch-hhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHH
Confidence 01000 00111257999999999999999999988877777778999999997 566899999999999
Q ss_pred HHHhc
Q 024900 241 FVTRH 245 (261)
Q Consensus 241 fl~~~ 245 (261)
||+++
T Consensus 408 wL~~~ 412 (414)
T PRK05077 408 WLEDR 412 (414)
T ss_pred HHHHH
Confidence 99875
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=150.75 Aligned_cols=200 Identities=14% Similarity=0.089 Sum_probs=115.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----cCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.+|+|+++|+||||.|... .+++.++.+|+.++++.+ +.++++++||||||.+++.+|.. +++|+
T Consensus 56 ~G~~v~~~Dl~G~G~S~~~---------~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~ 125 (274)
T TIGR03100 56 AGFPVLRFDYRGMGDSEGE---------NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVA 125 (274)
T ss_pred CCCEEEEeCCCCCCCCCCC---------CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCcc
Confidence 5799999999999999642 246778888888888776 45679999999999999999864 56899
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCC---cHHHHHHHh-c-
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV---TEELVEKIL-Q- 154 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~- 154 (261)
++|++++...... . .....+... +.....+.......+. +. ... ..+....+. .
T Consensus 126 ~lil~~p~~~~~~-----~---~~~~~~~~~---------~~~~~~~~~~~~~~~~---g~-~~~~~~~~~~~~~~~~~~ 184 (274)
T TIGR03100 126 GLVLLNPWVRTEA-----A---QAASRIRHY---------YLGQLLSADFWRKLLS---GE-VNLGSSLRGLGDALLKAR 184 (274)
T ss_pred EEEEECCccCCcc-----c---chHHHHHHH---------HHHHHhChHHHHHhcC---CC-ccHHHHHHHHHHHHHhhh
Confidence 9999997532110 0 000001000 0001111110010000 00 000 000000000 0
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh-----hhhcc-C-CCCccEEEcCCCCCCCC
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-----RAYGN-F-DSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-----~~~~~-~-~~~~~~~~i~~~gH~~~ 227 (261)
+.-.......+. . . ....|.++++|+++++|++|...+.... ...++ + .++.++..++++||++.
T Consensus 185 ~~~~~~~~~~~~---~----~-~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~ 256 (274)
T TIGR03100 185 QKGDEVAHGGLA---E----R-MKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFS 256 (274)
T ss_pred hcCCCcccchHH---H----H-HHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccc
Confidence 000000000000 0 0 0134567799999999999987542210 22222 2 26788999999999984
Q ss_pred -CCChhhHHHHHHHHHH
Q 024900 228 -DEAPHLVNPLVESFVT 243 (261)
Q Consensus 228 -~e~p~~~~~~l~~fl~ 243 (261)
.+.++++++.|.+||+
T Consensus 257 ~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 257 DRVWREWVAARTTEWLR 273 (274)
T ss_pred cHHHHHHHHHHHHHHHh
Confidence 5556999999999995
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.1e-19 Score=151.87 Aligned_cols=220 Identities=15% Similarity=0.155 Sum_probs=123.0
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------------------------CCCeEEEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------------------------KDQAFFIC 59 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~------------------------~~~~~lvG 59 (261)
..+|+|+++|+||||+|+...... ....+++++++|+.++++... ..+++|+|
T Consensus 72 ~~G~~V~~~D~rGHG~S~~~~~~~---g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~G 148 (332)
T TIGR01607 72 KNGYSVYGLDLQGHGESDGLQNLR---GHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIG 148 (332)
T ss_pred HCCCcEEEecccccCCCccccccc---cchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEee
Confidence 468999999999999997532110 112479999999999987642 24699999
Q ss_pred cChhHHHHHHHHhhCcc--------cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHH
Q 024900 60 NSIGGLVGLQAAVMEPE--------ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVR 131 (261)
Q Consensus 60 hS~Gg~va~~~a~~~p~--------~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (261)
|||||.|++.++..+++ .++++|++++....... ..+. ...+......++.. +. .++..+....
T Consensus 149 hSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~-~~~~-~~~~~~~~~~l~~~--~~-~~~p~~~~~~--- 220 (332)
T TIGR01607 149 LSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSV-GSDD-SFKFKYFYLPVMNF--MS-RVFPTFRISK--- 220 (332)
T ss_pred ccCccHHHHHHHHHhccccccccccccceEEEeccceEEecc-cCCC-cchhhhhHHHHHHH--HH-HHCCcccccC---
Confidence 99999999999976543 58999888876432100 0000 00000000001100 00 0000000000
Q ss_pred HHHHhhcCCCCCCcHHHHHHHhccCCC-Cc--hHHHHHHHHhhcCCCCccccCCCC--CCCEEEEecCCCCCCCchhhhh
Q 024900 132 NILCQCYNDTSQVTEELVEKILQPGLE-TG--AADVFLEFICYSGGPLPEELLPQV--KCPVLIAWGDKDPWEPIELGRA 206 (261)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~G~~D~~~~~~~~~~ 206 (261)
....+ .++...+......+. .+ ....+..+..... .. ...+..+ ++|+|+|+|++|.+++++.++.
T Consensus 221 ----~~~~~---~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~-~~-~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~ 291 (332)
T TIGR01607 221 ----KIRYE---KSPYVNDIIKFDKFRYDGGITFNLASELIKATD-TL-DCDIDYIPKDIPILFIHSKGDCVCSYEGTVS 291 (332)
T ss_pred ----ccccc---cChhhhhHHhcCccccCCcccHHHHHHHHHHHH-HH-HhhHhhCCCCCCEEEEEeCCCCccCHHHHHH
Confidence 00000 001111111111111 00 1112222211100 00 1123444 7999999999999999887665
Q ss_pred hc-cC-CCCccEEEcCCCCCCCCCCC-hhhHHHHHHHHHH
Q 024900 207 YG-NF-DSVEDFIVLPNVGHCPQDEA-PHLVNPLVESFVT 243 (261)
Q Consensus 207 ~~-~~-~~~~~~~~i~~~gH~~~~e~-p~~~~~~l~~fl~ 243 (261)
+. +. .++.+++++++++|.++.|. ++++.+.+.+||+
T Consensus 292 ~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 292 FYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 43 33 35678999999999999875 6889999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-18 Score=154.10 Aligned_cols=225 Identities=15% Similarity=0.109 Sum_probs=124.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHH----HHHhhC-ccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGL----QAAVME-PEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~----~~a~~~-p~~ 77 (261)
++++|+||++|++|+|.|.+... ...|..+.+.+.|..+++.++.++++++||||||.++. .+++.+ |++
T Consensus 217 ~~qGf~V~~iDwrgpg~s~~~~~-----~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~r 291 (532)
T TIGR01838 217 VEQGHTVFVISWRNPDASQADKT-----FDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKR 291 (532)
T ss_pred HHCCcEEEEEECCCCCcccccCC-----hhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCc
Confidence 45789999999999999865321 12355555666677777777889999999999999862 245555 889
Q ss_pred ccceEEeecchhhhhhccC-CCCCchhhHHHHHHhhhh--hhh---HHHHHhhcChHHHHH-HHHhhcCCCCCCcHHHHH
Q 024900 78 CRGMILLNISLRMLHIKKQ-PWYGRPLIRSFQNLLRNT--AAG---KLFYKMVATSESVRN-ILCQCYNDTSQVTEELVE 150 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 150 (261)
|+++|++++..-+...... .+........++..+... ..+ ...|+.+.....+.. .+.......... .-.+.
T Consensus 292 v~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~-~fdll 370 (532)
T TIGR01838 292 IKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPV-PFDLL 370 (532)
T ss_pred cceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCcc-chhHH
Confidence 9999999976432110000 000011111222222110 000 112332222222111 111111111111 11111
Q ss_pred HHhccCCC-Cch-HHHHH-HHHhhc---CCCC----ccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcC
Q 024900 151 KILQPGLE-TGA-ADVFL-EFICYS---GGPL----PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP 220 (261)
Q Consensus 151 ~~~~~~~~-~~~-~~~~~-~~~~~~---~~~~----~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~ 220 (261)
.+.....+ ++. ...+. .++... .+.. ....+.+|++|+++|+|++|.++|++.+..+.+..++.+..+++
T Consensus 371 ~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~ 450 (532)
T TIGR01838 371 FWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLG 450 (532)
T ss_pred HHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEEC
Confidence 11111222 111 11111 121111 0111 12457899999999999999999998887766666678888999
Q ss_pred CCCCCCCCCChhh
Q 024900 221 NVGHCPQDEAPHL 233 (261)
Q Consensus 221 ~~gH~~~~e~p~~ 233 (261)
++||.+++++|.-
T Consensus 451 ~sGHi~~ienPp~ 463 (532)
T TIGR01838 451 ESGHIAGVVNPPS 463 (532)
T ss_pred CCCCchHhhCCCC
Confidence 9999999988853
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-18 Score=139.59 Aligned_cols=222 Identities=20% Similarity=0.303 Sum_probs=121.2
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
|+|+++|+||||.|. .. .+....+++++..+++.++..+++++||||||.+++.++..+|++++++|++++
T Consensus 51 ~~~~~~d~~g~g~s~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~ 121 (282)
T COG0596 51 YRVIAPDLRGHGRSD-PA--------GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGP 121 (282)
T ss_pred eEEEEecccCCCCCC-cc--------cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecC
Confidence 999999999999997 10 134455589999999999999999999999999999999999999999999997
Q ss_pred chhhhhhccCCC--CCchhhHHHHHHhhhhhhhHHHHHhhcChH-HHHHHHH----hhcCCCCCCcHHHHHHHhccCCCC
Q 024900 87 SLRMLHIKKQPW--YGRPLIRSFQNLLRNTAAGKLFYKMVATSE-SVRNILC----QCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 87 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
............ ................. ........... ....... ...................... .
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 198 (282)
T COG0596 122 APPPGLLEAALRQPAGAAPLAALADLLLGLD--AAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAA-R 198 (282)
T ss_pred CCCcccccCccccCccccchhhhhhhhhccc--hhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhc-c
Confidence 643110000000 00000000000000000 00000000000 0000000 0000000000000000000000 0
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC-ccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
...... ..... .......+..+++|+++++|++|.+.|......+.+..++ .++.+++++||++++++|+.+++.+
T Consensus 199 ~~~~~~--~~~~~-~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 275 (282)
T COG0596 199 ADLAAA--LLALL-DRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAAL 275 (282)
T ss_pred cccchh--hhccc-ccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHH
Confidence 000000 00000 0011234667899999999999966665543445555553 7999999999999999999999999
Q ss_pred HHHHH
Q 024900 239 ESFVT 243 (261)
Q Consensus 239 ~~fl~ 243 (261)
.+|++
T Consensus 276 ~~~~~ 280 (282)
T COG0596 276 LAFLE 280 (282)
T ss_pred HHHHh
Confidence 88554
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.1e-18 Score=132.53 Aligned_cols=197 Identities=19% Similarity=0.275 Sum_probs=124.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
++|+|++|-+||||....- + -.+++++|-+|+.+-.+.| +-+++.++|.||||.+++-+|..+| ++++
T Consensus 41 ~GyTv~aP~ypGHG~~~e~----f---l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~i 111 (243)
T COG1647 41 NGYTVYAPRYPGHGTLPED----F---LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKI 111 (243)
T ss_pred CCceEecCCCCCCCCCHHH----H---hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccce
Confidence 6899999999999998521 1 2367888888877665555 4678999999999999999999999 9999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|.++++.... .. +..++.+....++.+ .+. ....+.+.+-+ ..+... ....
T Consensus 112 v~m~a~~~~k---~~----~~iie~~l~y~~~~k----k~e-~k~~e~~~~e~---------------~~~~~~--~~~~ 162 (243)
T COG1647 112 VPMCAPVNVK---SW----RIIIEGLLEYFRNAK----KYE-GKDQEQIDKEM---------------KSYKDT--PMTT 162 (243)
T ss_pred eeecCCcccc---cc----hhhhHHHHHHHHHhh----hcc-CCCHHHHHHHH---------------HHhhcc--hHHH
Confidence 9999865431 11 111222211111100 000 01111111111 011000 0011
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhh-hccC-CCCccEEEcCCCCCCCC-CCChhhHHHHH
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNF-DSVEDFIVLPNVGHCPQ-DEAPHLVNPLV 238 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~-~~~~~~~~i~~~gH~~~-~e~p~~~~~~l 238 (261)
...+..++.. ....+..|..|++++.|++|.++|.+.+.. +... ....++.+++++||..- .++.|.+.+.+
T Consensus 163 ~~~~~~~i~~-----~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 163 TAQLKKLIKD-----ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred HHHHHHHHHH-----HHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHH
Confidence 1111122211 124478899999999999999999998765 4444 33468999999999954 56678999999
Q ss_pred HHHHHh
Q 024900 239 ESFVTR 244 (261)
Q Consensus 239 ~~fl~~ 244 (261)
..||++
T Consensus 238 ~~FL~~ 243 (243)
T COG1647 238 ITFLEK 243 (243)
T ss_pred HHHhhC
Confidence 999963
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.8e-18 Score=143.39 Aligned_cols=216 Identities=14% Similarity=0.108 Sum_probs=115.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccc--c
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYT---FETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI--C 78 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~---~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~--v 78 (261)
..+|+|+++|+||||.|....++ .|. .++....+..+.++++..+++++||||||.++..++..+++. +
T Consensus 85 ~~G~~v~~~d~rG~g~~~~~~~~------~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~ 158 (324)
T PRK10985 85 KRGWLGVVMHFRGCSGEPNRLHR------IYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPL 158 (324)
T ss_pred HCCCEEEEEeCCCCCCCccCCcc------eECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCc
Confidence 46899999999999977432111 122 233222222233334567899999999999999998887654 8
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHH--------
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVE-------- 150 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 150 (261)
.++|+++++......... ..+.+...+...+. ..+. ..+.+.+.. +......+.+.+.
T Consensus 159 ~~~v~i~~p~~~~~~~~~--~~~~~~~~~~~~l~---------~~l~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~f 224 (324)
T PRK10985 159 DAAVIVSAPLMLEACSYR--MEQGFSRVYQRYLL---------NLLK--ANAARKLAA-YPGTLPINLAQLKSVRRLREF 224 (324)
T ss_pred cEEEEEcCCCCHHHHHHH--HhhhHHHHHHHHHH---------HHHH--HHHHHHHHh-ccccccCCHHHHhcCCcHHHH
Confidence 999999876432211000 00000000110000 0000 000000111 1110011111111
Q ss_pred --HHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 151 --KILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
.+..+..-......++ .. .. ..+.+++|++||++|+|++|++++.+....+.+..++.++.+++++||++++
T Consensus 225 d~~~~~~~~g~~~~~~~y---~~--~~-~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~ 298 (324)
T PRK10985 225 DDLITARIHGFADAIDYY---RQ--CS-ALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFV 298 (324)
T ss_pred hhhheeccCCCCCHHHHH---HH--CC-hHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeC
Confidence 1111100011111111 11 11 1245789999999999999999988776656566777899999999999998
Q ss_pred CCh-----hhHHHHHHHHHHhc
Q 024900 229 EAP-----HLVNPLVESFVTRH 245 (261)
Q Consensus 229 e~p-----~~~~~~l~~fl~~~ 245 (261)
|-. --..+.+.+|+...
T Consensus 299 ~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 299 GGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCCCCCCccHHHHHHHHHHHh
Confidence 742 24556666777543
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-18 Score=140.37 Aligned_cols=218 Identities=22% Similarity=0.280 Sum_probs=130.8
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
..+|-||++|.+|||.|+.-.. ..-+++..++|+..+.+... .-+.+|.||||||.|++.+++++|+.
T Consensus 80 ~~g~~v~a~D~~GhG~SdGl~~------yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~ 153 (313)
T KOG1455|consen 80 KSGFAVYAIDYEGHGRSDGLHA------YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNF 153 (313)
T ss_pred hCCCeEEEeeccCCCcCCCCcc------cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcc
Confidence 4689999999999999985321 23478899999998887543 23699999999999999999999999
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh-ccC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL-QPG 156 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 156 (261)
-+|+|++.+.-+..+-.+. .+....+..++..--. .++...+.... .. .-.+++...... ++.
T Consensus 154 w~G~ilvaPmc~i~~~~kp----~p~v~~~l~~l~~liP---~wk~vp~~d~~----~~-----~~kdp~~r~~~~~npl 217 (313)
T KOG1455|consen 154 WDGAILVAPMCKISEDTKP----HPPVISILTLLSKLIP---TWKIVPTKDII----DV-----AFKDPEKRKILRSDPL 217 (313)
T ss_pred cccceeeecccccCCccCC----CcHHHHHHHHHHHhCC---ceeecCCcccc----cc-----ccCCHHHHHHhhcCCc
Confidence 9999998875433211111 1112222222211000 00000110000 00 000111111111 111
Q ss_pred CCCc--hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh-ccC-CCCccEEEcCCCCCCCCC-CCh
Q 024900 157 LETG--AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNF-DSVEDFIVLPNVGHCPQD-EAP 231 (261)
Q Consensus 157 ~~~~--~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~-~~~~~~~~i~~~gH~~~~-e~p 231 (261)
...+ ...+..++..... . ....+.++++|.+|+||+.|.++.+..++.+ ... -.+.++.++||.-|.++. |-+
T Consensus 218 ~y~g~pRl~T~~ElLr~~~-~-le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~ 295 (313)
T KOG1455|consen 218 CYTGKPRLKTAYELLRVTA-D-LEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPD 295 (313)
T ss_pred eecCCccHHHHHHHHHHHH-H-HHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCc
Confidence 1111 2233333332111 1 1345789999999999999999999988764 433 456799999999999885 333
Q ss_pred ---hhHHHHHHHHHHhc
Q 024900 232 ---HLVNPLVESFVTRH 245 (261)
Q Consensus 232 ---~~~~~~l~~fl~~~ 245 (261)
+.+...|.+||+++
T Consensus 296 en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 296 ENVEIVFGDIISWLDER 312 (313)
T ss_pred hhHHHHHHHHHHHHHhc
Confidence 44566677888764
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=143.73 Aligned_cols=226 Identities=18% Similarity=0.257 Sum_probs=120.0
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHH----HHHHhcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQ-LND----FCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~d-l~~----~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
..+|+|+++|++|+|.|+.. +++++++.+ +.+ +++..+.++++++||||||.+++.+++.+|++|
T Consensus 92 ~~G~~V~~~D~~g~g~s~~~----------~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v 161 (350)
T TIGR01836 92 ERGQDVYLIDWGYPDRADRY----------LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKI 161 (350)
T ss_pred HCCCeEEEEeCCCCCHHHhc----------CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchhe
Confidence 46899999999999988632 466777543 433 444456789999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCC-CCCchh-hHHHHHHhhhhh--hhHHHHHhhcChH-HHHHHHHhhcCCCCCCcHHHHHHH-
Q 024900 79 RGMILLNISLRMLHIKKQP-WYGRPL-IRSFQNLLRNTA--AGKLFYKMVATSE-SVRNILCQCYNDTSQVTEELVEKI- 152 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 152 (261)
+++|+++++.......... ...+.. ...........+ .....|..+.... ...+....... ..+++.+..+
T Consensus 162 ~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~---~~~~~~~~~~~ 238 (350)
T TIGR01836 162 KNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDI---LEDERKVENFL 238 (350)
T ss_pred eeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHh---cCChHHHHHHH
Confidence 9999998765331100000 000000 000000000000 0000011110000 00000000000 0011111111
Q ss_pred -----hccCCCCchHHHHHHHHh--hc-----CCCC----ccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC--Cc
Q 024900 153 -----LQPGLETGAADVFLEFIC--YS-----GGPL----PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VE 214 (261)
Q Consensus 153 -----~~~~~~~~~~~~~~~~~~--~~-----~~~~----~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~ 214 (261)
...... .....+.++.. +. .+.. ....+++++||+++++|++|.++|++..+.+.+..+ ..
T Consensus 239 ~~~~w~~d~~~-~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~ 317 (350)
T TIGR01836 239 RMEKWIFDSPD-QAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDY 317 (350)
T ss_pred HHHHHhcCCcC-ccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCe
Confidence 111111 01111111110 00 0000 012367899999999999999999887776655433 34
Q ss_pred cEEEcCCCCCCCCCCC---hhhHHHHHHHHHHh
Q 024900 215 DFIVLPNVGHCPQDEA---PHLVNPLVESFVTR 244 (261)
Q Consensus 215 ~~~~i~~~gH~~~~e~---p~~~~~~l~~fl~~ 244 (261)
++++++ +||+..+.. ++++.+.+.+|+.+
T Consensus 318 ~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 318 TELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred EEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 566665 799987654 47888999999875
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=153.98 Aligned_cols=236 Identities=18% Similarity=0.207 Sum_probs=130.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcCCCeEEEEcChhHHHHHHHHhhC-ccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VVKDQAFFICNSIGGLVGLQAAVME-PEICR 79 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~---l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~ 79 (261)
..+|+|+++| +|.|+++.. ...+++.+++..+.+.++. +..++++++||||||.+++.+|+.+ |++|+
T Consensus 97 ~~g~~v~~~d---~G~~~~~~~-----~~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~ 168 (994)
T PRK07868 97 RAGLDPWVID---FGSPDKVEG-----GMERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIA 168 (994)
T ss_pred HCCCEEEEEc---CCCCChhHc-----CccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccc
Confidence 4579999999 687775421 1235788887777666554 4457999999999999999999865 56899
Q ss_pred ceEEeecchhhhhh-c-cCC--C--CCchh-hHHHHHHhhhh-hhhHHHHHhhcCh---HHHHHHHHhhcCCCCCCcHHH
Q 024900 80 GMILLNISLRMLHI-K-KQP--W--YGRPL-IRSFQNLLRNT-AAGKLFYKMVATS---ESVRNILCQCYNDTSQVTEEL 148 (261)
Q Consensus 80 ~lv~~~~~~~~~~~-~-~~~--~--~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 148 (261)
++|+++++.-.... . ..+ . ....+ ...+.....-+ ......|+.+... ......+..........+++.
T Consensus 169 ~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~ 248 (994)
T PRK07868 169 SIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQ 248 (994)
T ss_pred eEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchh
Confidence 99998876422100 0 000 0 00000 00000000000 0001111111110 001111111111111122333
Q ss_pred HHHHhccC-C-C-Cc-h-HHHHHHHHhh---cCCCCc----cccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccE
Q 024900 149 VEKILQPG-L-E-TG-A-ADVFLEFICY---SGGPLP----EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF 216 (261)
Q Consensus 149 ~~~~~~~~-~-~-~~-~-~~~~~~~~~~---~~~~~~----~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~ 216 (261)
++.+.... + . .+ . .+....+... ..+... ...+++|++|+|+|+|++|.++|++..+.+.+..+++++
T Consensus 249 ~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~ 328 (994)
T PRK07868 249 QRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEV 328 (994)
T ss_pred hHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeE
Confidence 33322111 1 1 11 1 1111222211 001000 124789999999999999999999988877777777887
Q ss_pred -EEcCCCCCCCCC---CChhhHHHHHHHHHHhcCC
Q 024900 217 -IVLPNVGHCPQD---EAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 217 -~~i~~~gH~~~~---e~p~~~~~~l~~fl~~~~~ 247 (261)
..++++||+.++ .-|+++...|.+||+++..
T Consensus 329 ~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 329 YESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred EEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 688999999875 5688899999999987543
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.7e-16 Score=135.15 Aligned_cols=235 Identities=14% Similarity=0.164 Sum_probs=125.1
Q ss_pred CCCeEEEecCCCCCCCCC-CCCC-CCCCCCCCCHHHHH-HHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCcc--
Q 024900 5 KSHRVYSIDLIGYGYSDK-PNPR-DFFDKPFYTFETWA-SQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPE-- 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~-~~~~-~~~~~~~~~~~~~a-~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~-- 76 (261)
.+|+|+.+|+||+|.|.. .... .....-.+++.+++ .|+.++++.+ ..+++++|||||||.+++.++ .+|+
T Consensus 106 ~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~ 184 (395)
T PLN02872 106 HGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVV 184 (395)
T ss_pred CCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHH
Confidence 589999999999886632 1000 00001147899998 7999999886 347899999999999999544 6777
Q ss_pred -cccceEEeecchhhhhhccCCCCCchhhHHH-----HHH---hhhh------hhhHHHHHhhcChHH-HHHHHHhhcCC
Q 024900 77 -ICRGMILLNISLRMLHIKKQPWYGRPLIRSF-----QNL---LRNT------AAGKLFYKMVATSES-VRNILCQCYND 140 (261)
Q Consensus 77 -~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~ 140 (261)
+|+.++++++.....+.. .++...+ ..+ +... .....+...++.... -...+....+.
T Consensus 185 ~~v~~~~~l~P~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~ 258 (395)
T PLN02872 185 EMVEAAALLCPISYLDHVT------APLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGT 258 (395)
T ss_pred HHHHHHHHhcchhhhccCC------CHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCC
Confidence 688888888764432111 1111000 000 0000 000000111111000 00000000010
Q ss_pred CCCCcHHHHHHHhccCCCCchHHHHH--------------------HHHhhcCCCCccccCCCC--CCCEEEEecCCCCC
Q 024900 141 TSQVTEELVEKILQPGLETGAADVFL--------------------EFICYSGGPLPEELLPQV--KCPVLIAWGDKDPW 198 (261)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~l~~i--~~Pvlii~G~~D~~ 198 (261)
...+....+..++....-........ ....+.....+.-.+.+| ++|+++++|++|.+
T Consensus 259 ~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~l 338 (395)
T PLN02872 259 NCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGL 338 (395)
T ss_pred CcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCC
Confidence 01112211111111000000000000 111122112222246777 68999999999999
Q ss_pred CCchhhhhhcc-CCCCccEEEcCCCCCC---CCCCChhhHHHHHHHHHHhcC
Q 024900 199 EPIELGRAYGN-FDSVEDFIVLPNVGHC---PQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 199 ~~~~~~~~~~~-~~~~~~~~~i~~~gH~---~~~e~p~~~~~~l~~fl~~~~ 246 (261)
++++..+.+.+ +.+..+++.++++||. ...|.|+++++.|.+|+++..
T Consensus 339 v~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 339 ADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred CCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 98876555444 4443688899999995 566999999999999998643
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-15 Score=120.15 Aligned_cols=159 Identities=11% Similarity=0.020 Sum_probs=104.1
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||||. ++++++.+++++++.++++++||||||.+++.+|..+|. .+|++
T Consensus 31 ~~~~v~~~dl~g~~~------------------~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~ 89 (190)
T PRK11071 31 PDIEMIVPQLPPYPA------------------DAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVV 89 (190)
T ss_pred CCCeEEeCCCCCCHH------------------HHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEE
Confidence 379999999999851 356788889999999999999999999999999999983 46788
Q ss_pred ecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHH
Q 024900 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (261)
+++... .+.+........ . + ..++.-.++.+.+..
T Consensus 90 ~~~~~~-------------~~~~~~~~~~~~------~----~---------~~~~~~~~~~~~~~d------------- 124 (190)
T PRK11071 90 NPAVRP-------------FELLTDYLGENE------N----P---------YTGQQYVLESRHIYD------------- 124 (190)
T ss_pred CCCCCH-------------HHHHHHhcCCcc------c----c---------cCCCcEEEcHHHHHH-------------
Confidence 874321 011111110000 0 0 000000011111111
Q ss_pred HHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHH
Q 024900 165 FLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVT 243 (261)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~ 243 (261)
...+ .. ..+. .++||++|+|++|.++|.+.+..+.+ +++.+.++|++|.. ...+++.+.+.+|++
T Consensus 125 ---~~~~---~~--~~i~-~~~~v~iihg~~De~V~~~~a~~~~~---~~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 125 ---LKVM---QI--DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYA---ACRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred ---HHhc---CC--ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHH---hcceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 1111 11 1233 78899999999999999998766544 35677889999996 455888888988874
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.4e-16 Score=124.48 Aligned_cols=211 Identities=21% Similarity=0.335 Sum_probs=118.2
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhh--Ccccccc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVM--EPEICRG 80 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~--~p~~v~~ 80 (261)
+.+|+++|+||||.|.-.+. ...+.+.++.|+..+++++-. .+++||||||||.||...|.. -|. +.|
T Consensus 102 ~~r~~a~DlRgHGeTk~~~e------~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~G 174 (343)
T KOG2564|consen 102 RCRCLALDLRGHGETKVENE------DDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAG 174 (343)
T ss_pred ceeEEEeeccccCccccCCh------hhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhc
Confidence 47889999999999964332 347899999999999988853 479999999999999888875 476 999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhc---CCCCCCcH-HHHHHHhccC
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY---NDTSQVTE-ELVEKILQPG 156 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~ 156 (261)
|+++|..=.. ........+..+++.+. .|+++.. .+...+.... .+..+++- ..+... ..+
T Consensus 175 l~viDVVEgt---------AmeAL~~m~~fL~~rP~---~F~Si~~--Ai~W~v~sg~~Rn~~SArVsmP~~~~~~-~eG 239 (343)
T KOG2564|consen 175 LVVIDVVEGT---------AMEALNSMQHFLRNRPK---SFKSIED--AIEWHVRSGQLRNRDSARVSMPSQLKQC-EEG 239 (343)
T ss_pred eEEEEEechH---------HHHHHHHHHHHHhcCCc---cccchhh--HHHHHhccccccccccceEecchheeec-cCC
Confidence 9999863100 00011111222222110 1111110 0000000000 00000110 000000 000
Q ss_pred --------C---CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCC
Q 024900 157 --------L---ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC 225 (261)
Q Consensus 157 --------~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 225 (261)
+ ..-+..+|.. + .+.+-...+|-++|-..-|.. ..+. ...++.-.-++.+++.+||+
T Consensus 240 h~yvwrtdL~kte~YW~gWF~g--------L-S~~Fl~~p~~klLilAg~d~L-DkdL--tiGQMQGk~Q~~vL~~~GH~ 307 (343)
T KOG2564|consen 240 HCYVWRTDLEKTEQYWKGWFKG--------L-SDKFLGLPVPKLLILAGVDRL-DKDL--TIGQMQGKFQLQVLPLCGHF 307 (343)
T ss_pred CcEEEEeeccccchhHHHHHhh--------h-hhHhhCCCccceeEEeccccc-Ccce--eeeeeccceeeeeecccCce
Confidence 0 0001111111 0 122335678877777776764 3222 13344333588999999999
Q ss_pred CCCCChhhHHHHHHHHHHhcCCCCC
Q 024900 226 PQDEAPHLVNPLVESFVTRHATPPA 250 (261)
Q Consensus 226 ~~~e~p~~~~~~l~~fl~~~~~~~~ 250 (261)
.|++.|..++..+..|+..+.-.++
T Consensus 308 v~ED~P~kva~~~~~f~~Rn~~~~~ 332 (343)
T KOG2564|consen 308 VHEDSPHKVAECLCVFWIRNRFAEP 332 (343)
T ss_pred eccCCcchHHHHHHHHHhhhccccc
Confidence 9999999999999999987654333
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.7e-15 Score=123.80 Aligned_cols=191 Identities=11% Similarity=0.071 Sum_probs=104.5
Q ss_pred CCCCeEEEecCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHhcCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 4 AKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLN---DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~a~dl~---~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
..+|.|+.||.||+ |.|+..- ..++.....+|+. ++++..+.+++.|+||||||.+|+..|...+ ++
T Consensus 62 ~~G~~vLrfD~rg~~GeS~G~~-------~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~--v~ 132 (307)
T PRK13604 62 SNGFHVIRYDSLHHVGLSSGTI-------DEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEID--LS 132 (307)
T ss_pred HCCCEEEEecCCCCCCCCCCcc-------ccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCC--CC
Confidence 46899999999988 9996421 1123333456664 4444445678999999999999977776443 88
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCc-HHHHHHHhccCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVT-EELVEKILQPGLE 158 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 158 (261)
.+|+.++..... ..+...+...- . .+.....+.... + ....+. ...++....-.+
T Consensus 133 ~lI~~sp~~~l~-------------d~l~~~~~~~~-~--~~p~~~lp~~~d------~-~g~~l~~~~f~~~~~~~~~- 188 (307)
T PRK13604 133 FLITAVGVVNLR-------------DTLERALGYDY-L--SLPIDELPEDLD------F-EGHNLGSEVFVTDCFKHGW- 188 (307)
T ss_pred EEEEcCCcccHH-------------HHHHHhhhccc-c--cCcccccccccc------c-ccccccHHHHHHHHHhcCc-
Confidence 888777643211 00110000000 0 000000000000 0 000000 011111100000
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CC-CCccEEEcCCCCCCCCCCChhhHHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FD-SVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~-~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
.....+.+.++.+++|+|+|||+.|.++|.+.++.+.+ .. ..++++++||++|.... ++-
T Consensus 189 -------------~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~-~~~---- 250 (307)
T PRK13604 189 -------------DTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE-NLV---- 250 (307)
T ss_pred -------------cccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc-chH----
Confidence 00000113356788999999999999999998866544 42 46899999999999654 332
Q ss_pred HHHHHHHhc
Q 024900 237 LVESFVTRH 245 (261)
Q Consensus 237 ~l~~fl~~~ 245 (261)
.+++|.++.
T Consensus 251 ~~~~~~~~~ 259 (307)
T PRK13604 251 VLRNFYQSV 259 (307)
T ss_pred HHHHHHHHH
Confidence 566676653
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-14 Score=118.03 Aligned_cols=223 Identities=17% Similarity=0.235 Sum_probs=119.8
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
+.++|.|+-+|.||+..-..+.+.+ ...-|+++++++|.+++++++++.++-+|--.|+.|-.++|..||++|.|||
T Consensus 52 i~~~f~i~Hi~aPGqe~ga~~~p~~---y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLi 128 (283)
T PF03096_consen 52 ILQNFCIYHIDAPGQEEGAATLPEG---YQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLI 128 (283)
T ss_dssp HHTTSEEEEEE-TTTSTT-----TT--------HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred HhhceEEEEEeCCCCCCCccccccc---ccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEE
Confidence 5578999999999997765433321 2345899999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCC-CcHHHHHHH---hccCCC
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ-VTEELVEKI---LQPGLE 158 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~ 158 (261)
++++.....+ +.+++..-+....+ .+. ..+.......+...|+.... ...+.++.+ +.....
T Consensus 129 Lvn~~~~~~g----------w~Ew~~~K~~~~~L---~~~-gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~N 194 (283)
T PF03096_consen 129 LVNPTCTAAG----------WMEWFYQKLSSWLL---YSY-GMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERIN 194 (283)
T ss_dssp EES---S-------------HHHHHHHHHH-----------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TT
T ss_pred EEecCCCCcc----------HHHHHHHHHhcccc---ccc-ccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCC
Confidence 9997644321 12222111110000 000 00000000001111110000 011223222 221111
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
+.-...|...+..+ .++ ....+...||||+|.|+..+... +..+...++ +..+++..+++||=++.+|+|+++++.
T Consensus 195 p~Nl~~f~~sy~~R-~DL-~~~~~~~~c~vLlvvG~~Sp~~~-~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea 271 (283)
T PF03096_consen 195 PKNLALFLNSYNSR-TDL-SIERPSLGCPVLLVVGDNSPHVD-DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEA 271 (283)
T ss_dssp HHHHHHHHHHHHT-------SECTTCCS-EEEEEETTSTTHH-HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHH
T ss_pred HHHHHHHHHHHhcc-ccc-hhhcCCCCCCeEEEEecCCcchh-hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHH
Confidence 11222332222211 112 23356677999999999998754 233444555 345789999999999999999999999
Q ss_pred HHHHHHhc
Q 024900 238 VESFVTRH 245 (261)
Q Consensus 238 l~~fl~~~ 245 (261)
++=|++..
T Consensus 272 ~~lFlQG~ 279 (283)
T PF03096_consen 272 FKLFLQGM 279 (283)
T ss_dssp HHHHHHHT
T ss_pred HHHHHccC
Confidence 99999753
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.5e-14 Score=117.45 Aligned_cols=61 Identities=21% Similarity=0.173 Sum_probs=44.2
Q ss_pred CCCC-CCCEEEEecCCCCCCCchhhhhhccCCC------CccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 181 LPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDS------VEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 181 l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
+.++ ++|+|+|+|++|..+|++.++.+.+..+ +.++.+++++||... |+ ..+.+.+||+++
T Consensus 181 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~-~~~~~~~fl~~~ 248 (249)
T PRK10566 181 LEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PE-ALDAGVAFFRQH 248 (249)
T ss_pred hhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HH-HHHHHHHHHHhh
Confidence 4555 7999999999999999987665543211 246778899999853 55 456666798864
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3e-13 Score=109.22 Aligned_cols=224 Identities=18% Similarity=0.263 Sum_probs=136.8
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
+.++|.|+-+|.|||=.-....+.+ ...-++++++++|..++++++.+.++-+|---|+.|-.++|+.||++|-+||
T Consensus 75 i~~~fcv~HV~~PGqe~gAp~~p~~---y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLv 151 (326)
T KOG2931|consen 75 ILEHFCVYHVDAPGQEDGAPSFPEG---YPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLV 151 (326)
T ss_pred HHhheEEEecCCCccccCCccCCCC---CCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEE
Confidence 3467999999999996554333322 2355899999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCC-CcHHHHHHH---hccCCC
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ-VTEELVEKI---LQPGLE 158 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~ 158 (261)
+++......+ |..+.+.+....+++...+ +......++...|+.... -..+.++.+ +.....
T Consensus 152 LIn~~~~a~g-----wiew~~~K~~s~~l~~~Gm---------t~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N 217 (326)
T KOG2931|consen 152 LINCDPCAKG-----WIEWAYNKVSSNLLYYYGM---------TQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLN 217 (326)
T ss_pred EEecCCCCch-----HHHHHHHHHHHHHHHhhch---------hhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCC
Confidence 9997543321 1111111111111211111 000001112222221100 122333332 222222
Q ss_pred CchHHHHHHHHhhcCCCCc--cc-cCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCCCCChhhH
Q 024900 159 TGAADVFLEFICYSGGPLP--EE-LLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~--~~-~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
+.-...|...+..+ .++. +. ....++||||+|.|++.+.+... .+.-.++ ..++.+..+.+||=.+++++|.++
T Consensus 218 ~~Nl~~fl~ayn~R-~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~v-v~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl 295 (326)
T KOG2931|consen 218 PKNLALFLNAYNGR-RDLSIERPKLGTTLKCPVLLVVGDNSPHVSAV-VECNSKLDPTYTTLLKMADCGGLVQEEQPGKL 295 (326)
T ss_pred hhHHHHHHHHhcCC-CCccccCCCcCccccccEEEEecCCCchhhhh-hhhhcccCcccceEEEEcccCCcccccCchHH
Confidence 23334443322211 1111 11 12266799999999998875422 2222333 345788999999999999999999
Q ss_pred HHHHHHHHHhc
Q 024900 235 NPLVESFVTRH 245 (261)
Q Consensus 235 ~~~l~~fl~~~ 245 (261)
.+.++-|++-.
T Consensus 296 ~ea~~~FlqG~ 306 (326)
T KOG2931|consen 296 AEAFKYFLQGM 306 (326)
T ss_pred HHHHHHHHccC
Confidence 99999999753
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-13 Score=114.96 Aligned_cols=237 Identities=19% Similarity=0.193 Sum_probs=133.1
Q ss_pred CCCeEEEecCCCCC-CCCCCCCC-CC-----CCCCCCCHHHHHHHHHHHHHHhcCCCeE-EEEcChhHHHHHHHHhhCcc
Q 024900 5 KSHRVYSIDLIGYG-YSDKPNPR-DF-----FDKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G-~S~~~~~~-~~-----~~~~~~~~~~~a~dl~~~~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~ 76 (261)
.+|.||+.|-.|.+ .|..|..- +. ..-..+|+.++++-...++++||++++. +||-||||+.+++++..|||
T Consensus 91 ~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd 170 (368)
T COG2021 91 ERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD 170 (368)
T ss_pred cceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH
Confidence 56999999999986 44333211 11 1123579999999888899999999966 99999999999999999999
Q ss_pred cccceEEeecchhhhh------------hc-cCCCCCchhhHH--HHHHhhhhhhhHHH-HHhhcChHHHHHHHHhhc-C
Q 024900 77 ICRGMILLNISLRMLH------------IK-KQPWYGRPLIRS--FQNLLRNTAAGKLF-YKMVATSESVRNILCQCY-N 139 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~------------~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~ 139 (261)
+|++++.+.++.+... +. +..|.+..+... -...++ ..+.+ .-...+++.+.+.+.... .
T Consensus 171 ~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~---~AR~l~~ltYrS~~~~~~rF~r~~~~ 247 (368)
T COG2021 171 RVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLR---LARMLAHLTYRSEEELDERFGRRLQA 247 (368)
T ss_pred HHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHH---HHHHHHHHHccCHHHHHHHhcccccc
Confidence 9999999987654210 00 001100000000 000000 00000 000112222211111100 0
Q ss_pred CCCCC--cHHHHHHHhccCC----CCchHHHHHHHH-hhcCCCCcc------ccCCCCCCCEEEEecCCCCCCCchhhhh
Q 024900 140 DTSQV--TEELVEKILQPGL----ETGAADVFLEFI-CYSGGPLPE------ELLPQVKCPVLIAWGDKDPWEPIELGRA 206 (261)
Q Consensus 140 ~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~------~~l~~i~~Pvlii~G~~D~~~~~~~~~~ 206 (261)
+.... ....++.+++... ..-....|+.+. ++...+..+ +.|++|++|+|++.=+.|...|++..+.
T Consensus 248 ~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~ 327 (368)
T COG2021 248 DPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRA 327 (368)
T ss_pred cccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHH
Confidence 00000 0122233222110 000011111111 111111111 2478999999999999999999988777
Q ss_pred hccCCCCcc-EEEc-CCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 207 YGNFDSVED-FIVL-PNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 207 ~~~~~~~~~-~~~i-~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
+.+..+.+. +..| ...||-.++...+.+.+.|..||+.
T Consensus 328 ~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 328 LAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 666544444 5444 6779999999999999999999964
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.8e-14 Score=112.98 Aligned_cols=165 Identities=18% Similarity=0.212 Sum_probs=106.9
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+++|++||.+|+|.|...+.+ .+..+-++-+.+.+++-. .++++|.|+|+|....+.+|+++| +++||+
T Consensus 88 n~nv~~~DYSGyG~S~G~psE-------~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL 158 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKPSE-------RNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVL 158 (258)
T ss_pred cceEEEEecccccccCCCccc-------ccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEE
Confidence 789999999999999753221 111111222334444433 478999999999999999999999 999998
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (261)
.++-.... +.+. .-..+ . + + .+
T Consensus 159 ~SPf~S~~-----------------rv~~---------~~~~~---------~-~---------~-------------~d 180 (258)
T KOG1552|consen 159 HSPFTSGM-----------------RVAF---------PDTKT---------T-Y---------C-------------FD 180 (258)
T ss_pred eccchhhh-----------------hhhc---------cCcce---------E-E---------e-------------ec
Confidence 88632110 0000 00000 0 0 0 00
Q ss_pred HHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCCCCChhhHHHHHHHHH
Q 024900 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242 (261)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 242 (261)
.|. .-+.++.|+|||||++|++|.+++...+..+-+. ...-+..++.|+||.-..- ..++-..++.|+
T Consensus 181 ~f~----------~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~-~~~yi~~l~~f~ 249 (258)
T KOG1552|consen 181 AFP----------NIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIEL-YPEYIEHLRRFI 249 (258)
T ss_pred ccc----------ccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccccc-CHHHHHHHHHHH
Confidence 000 0134678999999999999999999887664433 3223678999999996554 445777888898
Q ss_pred HhcCCC
Q 024900 243 TRHATP 248 (261)
Q Consensus 243 ~~~~~~ 248 (261)
......
T Consensus 250 ~~~~~~ 255 (258)
T KOG1552|consen 250 SSVLPS 255 (258)
T ss_pred HHhccc
Confidence 765544
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-13 Score=107.74 Aligned_cols=202 Identities=17% Similarity=0.136 Sum_probs=117.9
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhcCCCeEEEEcChhHHHHHHHHhhCcc---c
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK-DVVKDQAFFICNSIGGLVGLQAAVMEPE---I 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~-~l~~~~~~lvGhS~Gg~va~~~a~~~p~---~ 77 (261)
.|+....++++.+||+|.--.- ....+++.+++.|..-+. -+...++.++||||||+||+++|.+... .
T Consensus 29 ~lp~~iel~avqlPGR~~r~~e-------p~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~ 101 (244)
T COG3208 29 RLPADIELLAVQLPGRGDRFGE-------PLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLP 101 (244)
T ss_pred hCCchhheeeecCCCcccccCC-------cccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCC
Confidence 3566789999999999976321 134689999999887776 3445689999999999999999986422 2
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
..++.+.+.........+.. ....- ..+...+.+. ....++.+ .++|.+..++ |.+
T Consensus 102 p~~lfisg~~aP~~~~~~~i-~~~~D-~~~l~~l~~l--------gG~p~e~l-------------ed~El~~l~L-Pil 157 (244)
T COG3208 102 PRALFISGCRAPHYDRGKQI-HHLDD-ADFLADLVDL--------GGTPPELL-------------EDPELMALFL-PIL 157 (244)
T ss_pred cceEEEecCCCCCCcccCCc-cCCCH-HHHHHHHHHh--------CCCChHHh-------------cCHHHHHHHH-HHH
Confidence 55666555432211000000 00000 1111111100 00000000 1123322221 111
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
..++.......-.. -..++||+.++.|++|..+..+.....++. -..-++..++| ||+...++.+++.+
T Consensus 158 -------RAD~~~~e~Y~~~~--~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~ 227 (244)
T COG3208 158 -------RADFRALESYRYPP--PAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLA 227 (244)
T ss_pred -------HHHHHHhcccccCC--CCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHH
Confidence 11222222211111 256899999999999999888765534433 33457888976 99999999999999
Q ss_pred HHHHHHHh
Q 024900 237 LVESFVTR 244 (261)
Q Consensus 237 ~l~~fl~~ 244 (261)
.|.+.+..
T Consensus 228 ~i~~~l~~ 235 (244)
T COG3208 228 RLEQHLAH 235 (244)
T ss_pred HHHHHhhh
Confidence 99988864
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.6e-14 Score=111.44 Aligned_cols=186 Identities=16% Similarity=0.159 Sum_probs=106.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
+++|.|+.+|.||.+.......... ..... ...++|+.+.++.+ ..+++.++|||+||++++.++..+|++
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~~~--~~~~~-~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~ 88 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHEAG--RGDWG-QADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDR 88 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHHTT--TTGTT-HHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCG
T ss_pred hCCEEEEEEcCCCCCccchhHHHhh--hcccc-ccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhccccee
Confidence 6899999999999884321100000 00111 22355566555555 235799999999999999999999999
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
++++|..++...... . ......+.. . ... .++... ..++..+.
T Consensus 89 f~a~v~~~g~~d~~~-----~--~~~~~~~~~-------~--------------~~~--~~~~~~-~~~~~~~~------ 131 (213)
T PF00326_consen 89 FKAAVAGAGVSDLFS-----Y--YGTTDIYTK-------A--------------EYL--EYGDPW-DNPEFYRE------ 131 (213)
T ss_dssp SSEEEEESE-SSTTC-----S--BHHTCCHHH-------G--------------HHH--HHSSTT-TSHHHHHH------
T ss_pred eeeeeccceecchhc-----c--ccccccccc-------c--------------ccc--ccCccc-hhhhhhhh------
Confidence 999988876432110 0 000000000 0 000 001100 01111111
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCC--CCCCEEEEecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCC-CCC
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQ--VKCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQ-DEA 230 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvlii~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~-~e~ 230 (261)
.... ..+.+ +++|+|+++|++|..+|++.+.. +.+.....++.++|++||... -+.
T Consensus 132 ----------~s~~-------~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~ 194 (213)
T PF00326_consen 132 ----------LSPI-------SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPEN 194 (213)
T ss_dssp ----------HHHG-------GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHH
T ss_pred ----------hccc-------cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchh
Confidence 1110 11222 78999999999999999886543 344444479999999999544 455
Q ss_pred hhhHHHHHHHHHHhcC
Q 024900 231 PHLVNPLVESFVTRHA 246 (261)
Q Consensus 231 p~~~~~~l~~fl~~~~ 246 (261)
..+..+.+.+|++++.
T Consensus 195 ~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 195 RRDWYERILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5677888889998765
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.7e-14 Score=114.97 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=64.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC---KDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~---~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.+|+|+++|+||||.|.... ..+++..+++|+..++ ++.+.++++|+||||||.+++.+|..+|++++++
T Consensus 55 ~Gy~Vl~~Dl~G~G~S~g~~-------~~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~l 127 (266)
T TIGR03101 55 GGFGVLQIDLYGCGDSAGDF-------AAARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRL 127 (266)
T ss_pred CCCEEEEECCCCCCCCCCcc-------ccCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceE
Confidence 57999999999999997532 2357888888887654 4445679999999999999999999999999999
Q ss_pred EEeecc
Q 024900 82 ILLNIS 87 (261)
Q Consensus 82 v~~~~~ 87 (261)
|++++.
T Consensus 128 VL~~P~ 133 (266)
T TIGR03101 128 VLWQPV 133 (266)
T ss_pred EEeccc
Confidence 999875
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3e-12 Score=99.04 Aligned_cols=191 Identities=18% Similarity=0.224 Sum_probs=112.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCC---eEEEEcChhHHHHHHHHhhCcccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ---AFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~---~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.++.++-+|.+|-|.|+... .+. .....|+|+..+++.+.... .+++|||-||-+++.+|..+++ ++-+
T Consensus 61 ~gis~fRfDF~GnGeS~gsf-----~~G--n~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~v 132 (269)
T KOG4667|consen 61 EGISAFRFDFSGNGESEGSF-----YYG--NYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNV 132 (269)
T ss_pred cCceEEEEEecCCCCcCCcc-----ccC--cccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chhe
Confidence 56999999999999998542 112 33455799999988885432 6699999999999999999987 7777
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|-+++.....+.-. .+.++.+.+.+. .. .|.....+. ..+ .-.++++-+...+..
T Consensus 133 iNcsGRydl~~~I~-eRlg~~~l~~ik---e~-----Gfid~~~rk--------G~y--~~rvt~eSlmdrLnt------ 187 (269)
T KOG4667|consen 133 INCSGRYDLKNGIN-ERLGEDYLERIK---EQ-----GFIDVGPRK--------GKY--GYRVTEESLMDRLNT------ 187 (269)
T ss_pred EEcccccchhcchh-hhhcccHHHHHH---hC-----CceecCccc--------CCc--CceecHHHHHHHHhc------
Confidence 66655321110000 001111111110 00 000000000 000 111223222111110
Q ss_pred HHHHHHHHhhcCCCCccccC-CCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 162 ADVFLEFICYSGGPLPEELL-PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l-~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
+.....+ -..+||||-++|..|.++|.+.+..+++++++..+.+|||+.|.--..+.+ .+.+...
T Consensus 188 -------------d~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~-l~~lgl~ 253 (269)
T KOG4667|consen 188 -------------DIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQ-LVSLGLE 253 (269)
T ss_pred -------------hhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchhhh-Hhhhcce
Confidence 0001111 134799999999999999999998999888889999999999996654443 3344444
Q ss_pred HH
Q 024900 241 FV 242 (261)
Q Consensus 241 fl 242 (261)
|.
T Consensus 254 f~ 255 (269)
T KOG4667|consen 254 FI 255 (269)
T ss_pred eE
Confidence 44
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.2e-13 Score=99.42 Aligned_cols=121 Identities=24% Similarity=0.373 Sum_probs=86.1
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+.+|.|+++|+||+|.+... ....++.+++. ....+.+++.++|||+||.+++.++..+ .+++++|+
T Consensus 24 ~~G~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~ 90 (145)
T PF12695_consen 24 EQGYAVVAFDYPGHGDSDGA----------DAVERVLADIR--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVL 90 (145)
T ss_dssp HTTEEEEEESCTTSTTSHHS----------HHHHHHHHHHH--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEE
T ss_pred HCCCEEEEEecCCCCccchh----------HHHHHHHHHHH--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEE
Confidence 46799999999999999431 12333333332 1112567899999999999999999988 78999998
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (261)
+++.+. .
T Consensus 91 ~~~~~~---------------------------~---------------------------------------------- 97 (145)
T PF12695_consen 91 LSPYPD---------------------------S---------------------------------------------- 97 (145)
T ss_dssp ESESSG---------------------------C----------------------------------------------
T ss_pred ecCccc---------------------------h----------------------------------------------
Confidence 885100 0
Q ss_pred HHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh-ccCCCCccEEEcCCCCCC
Q 024900 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGHC 225 (261)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~~~~~~~~~i~~~gH~ 225 (261)
+.+...++|+++++|++|..++.+..+.+ +++....++.++++++|+
T Consensus 98 ---------------~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 ---------------EDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ---------------HHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ---------------hhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 00123345999999999999998876654 444556799999999996
|
... |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.6e-11 Score=104.69 Aligned_cols=211 Identities=13% Similarity=0.126 Sum_probs=115.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHH----HHhhC
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQ----AAVME 74 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~----~a~~~ 74 (261)
+.++|+||.+|.++-|.+++ ..++++|++.|.+.++.. +.++++++|+++||.++.. +|+++
T Consensus 244 v~qG~~VflIsW~nP~~~~r----------~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~ 313 (560)
T TIGR01839 244 LKNQLQVFIISWRNPDKAHR----------EWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALG 313 (560)
T ss_pred HHcCCeEEEEeCCCCChhhc----------CCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcC
Confidence 56899999999999776652 368999998777776665 4678999999999999997 88888
Q ss_pred cc-cccceEEeecchhhhhhccC-CCCCchhhHHHHHHhh-hh-hhh---HHHHHhhcChHHHHHHHHhhc--CCCCCCc
Q 024900 75 PE-ICRGMILLNISLRMLHIKKQ-PWYGRPLIRSFQNLLR-NT-AAG---KLFYKMVATSESVRNILCQCY--NDTSQVT 145 (261)
Q Consensus 75 p~-~v~~lv~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 145 (261)
++ +|++++++.++.-....... .+.............. .. ..+ ...|..+.....+...+...+ ++....
T Consensus 314 ~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~- 392 (560)
T TIGR01839 314 QLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPA- 392 (560)
T ss_pred CCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcch-
Confidence 86 89999999875432110000 0000001111111111 00 001 112333322222222222222 121111
Q ss_pred HHHHHHHhccCCC-Cch-HHHHHHHHhhcC----CCC----ccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC-CCc
Q 024900 146 EELVEKILQPGLE-TGA-ADVFLEFICYSG----GPL----PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-SVE 214 (261)
Q Consensus 146 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~----~~~----~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~ 214 (261)
..+..+.....+ ++. ...+..++.... +.. ..=.|++|+||+++|.|+.|+++|++++....++. ...
T Consensus 393 -fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~ 471 (560)
T TIGR01839 393 -FDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKR 471 (560)
T ss_pred -hhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCe
Confidence 113333333222 221 122333221111 111 01137899999999999999999999876665543 234
Q ss_pred cEEEcCCCCCCC
Q 024900 215 DFIVLPNVGHCP 226 (261)
Q Consensus 215 ~~~~i~~~gH~~ 226 (261)
+++.. ++||..
T Consensus 472 ~fvl~-~gGHIg 482 (560)
T TIGR01839 472 RFVLS-NSGHIQ 482 (560)
T ss_pred EEEec-CCCccc
Confidence 55444 668873
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.34 E-value=5e-12 Score=110.40 Aligned_cols=77 Identities=14% Similarity=0.110 Sum_probs=63.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|+|+++|++|+|.|..+.. . .....+++++.++++.| ..++++||||||||.||..++..+|++|
T Consensus 72 ~d~nVI~VDw~g~g~s~y~~a------~-~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV 144 (442)
T TIGR03230 72 PSANVIVVDWLSRAQQHYPTS------A-AYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKV 144 (442)
T ss_pred CCCEEEEEECCCcCCCCCccc------c-ccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcce
Confidence 369999999999999876531 1 23366777788887765 3579999999999999999999999999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
.+++++|+..
T Consensus 145 ~rItgLDPAg 154 (442)
T TIGR03230 145 NRITGLDPAG 154 (442)
T ss_pred eEEEEEcCCC
Confidence 9999999864
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.9e-12 Score=96.85 Aligned_cols=182 Identities=19% Similarity=0.265 Sum_probs=109.6
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--hcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+..|+.++.||||+|+..+.+ ...+.-.+.+ +.-++.. +...+.++.|-|+||.+|..+|+...+++.++++
T Consensus 106 ~mnv~ivsYRGYG~S~GspsE----~GL~lDs~av--ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~iv 179 (300)
T KOG4391|consen 106 KMNVLIVSYRGYGKSEGSPSE----EGLKLDSEAV--LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIV 179 (300)
T ss_pred CceEEEEEeeccccCCCCccc----cceeccHHHH--HHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeee
Confidence 568999999999999864321 1122111111 1122222 2245799999999999999999999999999998
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (261)
-++.....+ ..-+++ .+ ....++.. ++ +.+
T Consensus 180 ENTF~SIp~------~~i~~v--------~p-~~~k~i~~----------lc--~kn----------------------- 209 (300)
T KOG4391|consen 180 ENTFLSIPH------MAIPLV--------FP-FPMKYIPL----------LC--YKN----------------------- 209 (300)
T ss_pred echhccchh------hhhhee--------cc-chhhHHHH----------HH--HHh-----------------------
Confidence 886432210 000000 00 00000000 00 000
Q ss_pred HHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-C-CCccEEEcCCCCCCCCCCChhhHHHHHHHH
Q 024900 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-D-SVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241 (261)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~-~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 241 (261)
.+ .....+..-+.|.|+|.|..|..+|+.+.+.+-.. + ...++.++|++.|.=.+- -+-..++|.+|
T Consensus 210 ~~----------~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dF 278 (300)
T KOG4391|consen 210 KW----------LSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDF 278 (300)
T ss_pred hh----------cchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHH
Confidence 00 00122445678999999999999999876554333 2 345899999999995552 35578899999
Q ss_pred HHhcCC-CCCcccc
Q 024900 242 VTRHAT-PPASVSA 254 (261)
Q Consensus 242 l~~~~~-~~~~~~~ 254 (261)
|.+... +++.-++
T Consensus 279 laE~~~~~P~~~a~ 292 (300)
T KOG4391|consen 279 LAEVVKSSPEEMAK 292 (300)
T ss_pred HHHhccCChHHhCC
Confidence 987654 3444333
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-10 Score=93.59 Aligned_cols=77 Identities=25% Similarity=0.344 Sum_probs=67.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC-CeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
..+.|+|...+||||.+..++. ..|+..+...-+.++++.++++ +..++|||.||-.|+.+|..+| +.+++
T Consensus 60 ~~~iR~I~iN~PGf~~t~~~~~------~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~ 131 (297)
T PF06342_consen 60 EAGIRFIGINYPGFGFTPGYPD------QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLV 131 (297)
T ss_pred HcCeEEEEeCCCCCCCCCCCcc------cccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEE
Confidence 3578999999999999987642 4588888888999999999975 6999999999999999999996 77999
Q ss_pred Eeecch
Q 024900 83 LLNISL 88 (261)
Q Consensus 83 ~~~~~~ 88 (261)
++++..
T Consensus 132 lin~~G 137 (297)
T PF06342_consen 132 LINPPG 137 (297)
T ss_pred EecCCc
Confidence 999864
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.5e-10 Score=94.38 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=57.7
Q ss_pred CCCeEEEecC--CCCCCCCCCC-------------CCCCCCCCCCCHHHH-HHHHHHHHHH---hcCCCeEEEEcChhHH
Q 024900 5 KSHRVYSIDL--IGYGYSDKPN-------------PRDFFDKPFYTFETW-ASQLNDFCKD---VVKDQAFFICNSIGGL 65 (261)
Q Consensus 5 ~~~~V~~~Dl--~G~G~S~~~~-------------~~~~~~~~~~~~~~~-a~dl~~~~~~---l~~~~~~lvGhS~Gg~ 65 (261)
.+|.|++||. +|+|.+.... .........|++.++ ++++..++++ ++.+++.++||||||.
T Consensus 71 ~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~ 150 (275)
T TIGR02821 71 HGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGH 150 (275)
T ss_pred cCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHH
Confidence 3799999998 5555432110 000000012444444 6777777776 3456899999999999
Q ss_pred HHHHHHhhCcccccceEEeecc
Q 024900 66 VGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 66 va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+++.+++.+|+.+++++++++.
T Consensus 151 ~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 151 GALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHhCcccceEEEEECCc
Confidence 9999999999999999988764
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.6e-10 Score=94.65 Aligned_cols=51 Identities=16% Similarity=0.200 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 37 ETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 37 ~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
++..+.+....+.++.++++|+||||||..++.++..+|+++++++.+++.
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 333334444444556788999999999999999999999999999988864
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.3e-09 Score=88.82 Aligned_cols=67 Identities=19% Similarity=0.295 Sum_probs=50.4
Q ss_pred cccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCCCCCCCCCC----Chh-hHHHHHHHHHHh
Q 024900 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQDE----APH-LVNPLVESFVTR 244 (261)
Q Consensus 178 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e----~p~-~~~~~l~~fl~~ 244 (261)
...|.+|.+|+|||+..+|++++++....... .+|+..+..-+.+||...+. +|. -..+.+-+|++.
T Consensus 267 ~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 267 LPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred cccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 35689999999999999999999876444333 57778888899999998876 443 334555566654
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-10 Score=99.88 Aligned_cols=229 Identities=17% Similarity=0.190 Sum_probs=124.8
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-----ccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-----PEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~ 77 (261)
|+ ++.||..|-.--+..... ...+++++|++-|.++++.+|.+ ++++|.++||..++.+++.+ |++
T Consensus 127 l~-g~dVYl~DW~~p~~vp~~-------~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~ 197 (406)
T TIGR01849 127 LP-DHDVYITDWVNARMVPLS-------AGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQ 197 (406)
T ss_pred hC-CCcEEEEeCCCCCCCchh-------cCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCC
Confidence 55 899999998766644311 13579999999899999988766 99999999999988777654 778
Q ss_pred ccceEEeecchhhhhhccCCCC-----CchhhHHHHHHhhh------------hhhhH---HHHHhhcCh---HHHHHHH
Q 024900 78 CRGMILLNISLRMLHIKKQPWY-----GRPLIRSFQNLLRN------------TAAGK---LFYKMVATS---ESVRNIL 134 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~------------~~~~~---~~~~~~~~~---~~~~~~~ 134 (261)
+++++++.++.-.. ..+.. ...-++.+...+.. ...+. .-|...... ......+
T Consensus 198 ~~sltlm~~PID~~---~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~ 274 (406)
T TIGR01849 198 PRSMTLMGGPIDAR---ASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFF 274 (406)
T ss_pred cceEEEEecCccCC---CCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHH
Confidence 99999998764321 11100 00001112211100 00000 011111110 0011111
Q ss_pred HhhcCCCCCCcHHHHHHHhc---cCCCCchHHHHHHHHh--hcC-----CCCc----cccCCCCC-CCEEEEecCCCCCC
Q 024900 135 CQCYNDTSQVTEELVEKILQ---PGLETGAADVFLEFIC--YSG-----GPLP----EELLPQVK-CPVLIAWGDKDPWE 199 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~-----~~~~----~~~l~~i~-~Pvlii~G~~D~~~ 199 (261)
.... .......+....+.+ ..+.. ....+.++.. +.. +.+. .=.+++|+ ||+|.|-|++|.++
T Consensus 275 ~~l~-~gd~~~~~~~~~f~~~y~d~~dl-pge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~ 352 (406)
T TIGR01849 275 LHLV-KGDGQEADKHRIFYDEYLAVMDM-TAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDIS 352 (406)
T ss_pred HHHh-cCCcchHHHHHHHHHHhhhccCC-cHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcC
Confidence 1110 011111111111111 11111 1122222210 110 1110 11367899 99999999999999
Q ss_pred CchhhhhhccC---CC--CccEEEcCCCCCCCCC---CChhhHHHHHHHHHHhc
Q 024900 200 PIELGRAYGNF---DS--VEDFIVLPNVGHCPQD---EAPHLVNPLVESFVTRH 245 (261)
Q Consensus 200 ~~~~~~~~~~~---~~--~~~~~~i~~~gH~~~~---e~p~~~~~~l~~fl~~~ 245 (261)
|+...+.+..+ .+ ..+....+++||.-.+ .-++++...|.+||.++
T Consensus 353 p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 353 GLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred CHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 99887655443 22 2346677899999665 44678889999999763
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-09 Score=88.65 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=34.0
Q ss_pred CCCEEEEecCCCCCCCchhhhhhc----cCCCCccEEEcCCCCCCCCC
Q 024900 185 KCPVLIAWGDKDPWEPIELGRAYG----NFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~i~~~gH~~~~ 228 (261)
++|+++++|++|+++|.+.++.+. +.....+++.++++||....
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~ 195 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDP 195 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH
Confidence 579999999999999988765433 23334678888999999753
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-09 Score=99.91 Aligned_cols=78 Identities=21% Similarity=0.119 Sum_probs=62.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-----CCeEEEEcChhHHHHHHHHhhCccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
++++|.|+++|+||+|.|+... ..++ ...++|+.++++.+.. +++.++|||+||.+++.+|+.+|++
T Consensus 50 ~~~Gy~vv~~D~RG~g~S~g~~-------~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~ 121 (550)
T TIGR00976 50 VAQGYAVVIQDTRGRGASEGEF-------DLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPA 121 (550)
T ss_pred HhCCcEEEEEeccccccCCCce-------EecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCc
Confidence 3679999999999999998532 1122 4456777777776633 4899999999999999999999999
Q ss_pred ccceEEeecch
Q 024900 78 CRGMILLNISL 88 (261)
Q Consensus 78 v~~lv~~~~~~ 88 (261)
++++|..++..
T Consensus 122 l~aiv~~~~~~ 132 (550)
T TIGR00976 122 LRAIAPQEGVW 132 (550)
T ss_pred eeEEeecCccc
Confidence 99999887654
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.8e-09 Score=91.35 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=48.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----H-------hcCCCeEEEEcChhHHHHHHHHhh
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK----D-------VVKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~----~-------l~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.+|.|+++|++|++.+... ..+++ ++++.+++. . .+.+++.++||||||.+++.+|..
T Consensus 78 ~G~~VvapD~~g~~~~~~~----------~~i~d-~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~ 146 (313)
T PLN00021 78 HGFIVVAPQLYTLAGPDGT----------DEIKD-AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALG 146 (313)
T ss_pred CCCEEEEecCCCcCCCCch----------hhHHH-HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhh
Confidence 4699999999997643211 12222 222222222 1 233679999999999999999999
Q ss_pred Ccc-----cccceEEeec
Q 024900 74 EPE-----ICRGMILLNI 86 (261)
Q Consensus 74 ~p~-----~v~~lv~~~~ 86 (261)
+++ +++++|.+++
T Consensus 147 ~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 147 KAAVSLPLKFSALIGLDP 164 (313)
T ss_pred ccccccccceeeEEeecc
Confidence 875 5678887775
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.5e-10 Score=96.46 Aligned_cols=78 Identities=14% Similarity=0.043 Sum_probs=60.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
++|+|+++|++|++.+..+. ..+++..+++++..+++.+ ..++++||||||||.||..++..+|++|
T Consensus 65 ~~~nVi~vD~~~~~~~~y~~-------a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v 137 (275)
T cd00707 65 GDYNVIVVDWGRGANPNYPQ-------AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKL 137 (275)
T ss_pred CCCEEEEEECccccccChHH-------HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCcc
Confidence 57999999999985443221 1235566666777766655 3468999999999999999999999999
Q ss_pred cceEEeecchh
Q 024900 79 RGMILLNISLR 89 (261)
Q Consensus 79 ~~lv~~~~~~~ 89 (261)
.++|.++++..
T Consensus 138 ~~iv~LDPa~p 148 (275)
T cd00707 138 GRITGLDPAGP 148 (275)
T ss_pred ceeEEecCCcc
Confidence 99999997643
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.8e-09 Score=85.51 Aligned_cols=77 Identities=22% Similarity=0.287 Sum_probs=62.0
Q ss_pred cCCC-CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC-CeEEEEcChhHHHHHHHHhhC---ccc
Q 024900 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVME---PEI 77 (261)
Q Consensus 3 L~~~-~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~-~~~lvGhS~Gg~va~~~a~~~---p~~ 77 (261)
|... +.|++++.+|++....+ ..++++++++..+.|.....+ ++.|+|||+||.||+++|.+- -..
T Consensus 23 l~~~~~~v~~i~~~~~~~~~~~---------~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~ 93 (229)
T PF00975_consen 23 LPDDVIGVYGIEYPGRGDDEPP---------PDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEE 93 (229)
T ss_dssp HTTTEEEEEEECSTTSCTTSHE---------ESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-S
T ss_pred CCCCeEEEEEEecCCCCCCCCC---------CCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhc
Confidence 4565 89999999999944432 248999999988888777665 999999999999999999864 345
Q ss_pred ccceEEeecch
Q 024900 78 CRGMILLNISL 88 (261)
Q Consensus 78 v~~lv~~~~~~ 88 (261)
|..|+++|+++
T Consensus 94 v~~l~liD~~~ 104 (229)
T PF00975_consen 94 VSRLILIDSPP 104 (229)
T ss_dssp ESEEEEESCSS
T ss_pred cCceEEecCCC
Confidence 89999999753
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.7e-08 Score=86.51 Aligned_cols=219 Identities=17% Similarity=0.206 Sum_probs=113.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhhC---c
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVME---P 75 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~~---p 75 (261)
..++|+|+++..||+|.|.-..++ .|+ .-+.+|+.++++.+. ..+...+|.||||.+.+.|-... .
T Consensus 151 ~~~G~r~VVfN~RG~~g~~LtTpr------~f~-ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~ 223 (409)
T KOG1838|consen 151 QRKGYRVVVFNHRGLGGSKLTTPR------LFT-AGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNT 223 (409)
T ss_pred HhCCcEEEEECCCCCCCCccCCCc------eee-cCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCC
Confidence 457899999999999999765443 344 234667777776664 35799999999999999998853 3
Q ss_pred ccccceEEeecchhh--hhhccCCCCCchhhHHHHHHhhhhhhh-HH-HHHhhcChHHHHHHHHhhcCCCCCCcHHHHHH
Q 024900 76 EICRGMILLNISLRM--LHIKKQPWYGRPLIRSFQNLLRNTAAG-KL-FYKMVATSESVRNILCQCYNDTSQVTEELVEK 151 (261)
Q Consensus 76 ~~v~~lv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (261)
..++++.+.++.-.. ...-..+-..+.+...+...+.+.... +. ++..... ...+.+. .+-..++.
T Consensus 224 ~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd---~d~~~~~-------~SvreFD~ 293 (409)
T KOG1838|consen 224 PLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVD---FDVILKS-------RSVREFDE 293 (409)
T ss_pred CceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccch---hhhhhhc-------CcHHHHHh
Confidence 345666555554321 000000000001111111111100000 00 0000000 0000000 00000111
Q ss_pred H-hccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh-hhhccCCCCccEEEcCCCCCCCCCC
Q 024900 152 I-LQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 152 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e 229 (261)
. ..+..-....+.|++- ......+.+|.+|+|.|+..+|+++|++.- ....+..|+.-+.+-..+||...+|
T Consensus 294 ~~t~~~~gf~~~deYY~~------aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfle 367 (409)
T KOG1838|consen 294 ALTRPMFGFKSVDEYYKK------ASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLE 367 (409)
T ss_pred hhhhhhcCCCcHHHHHhh------cchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeec
Confidence 1 1111111122333211 112346889999999999999999998642 2222345666777778999998887
Q ss_pred C----hhh-HHHHHHHHHHh
Q 024900 230 A----PHL-VNPLVESFVTR 244 (261)
Q Consensus 230 ~----p~~-~~~~l~~fl~~ 244 (261)
. +.. +.+.+.+|+.+
T Consensus 368 g~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 368 GLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred cCCCccchhHHHHHHHHHHH
Confidence 7 222 33336666654
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.04 E-value=7e-09 Score=89.32 Aligned_cols=189 Identities=15% Similarity=0.169 Sum_probs=97.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
..++.++++|+||-|.|.+-..+ . +.+.+-..+.+.+.... ..++.++|.|+||.+|.++|..+++++++
T Consensus 216 ~rGiA~LtvDmPG~G~s~~~~l~-----~--D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~Rlka 288 (411)
T PF06500_consen 216 PRGIAMLTVDMPGQGESPKWPLT-----Q--DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKA 288 (411)
T ss_dssp HCT-EEEEE--TTSGGGTTT-S------S---CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SE
T ss_pred hCCCEEEEEccCCCcccccCCCC-----c--CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceee
Confidence 47899999999999999643221 1 22334445555555443 35899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|..+++.-- -+.. .. ...+. |......++.+++.. ..+++.+..-
T Consensus 289 vV~~Ga~vh~-----------~ft~-~~-~~~~~------------P~my~d~LA~rlG~~-~~~~~~l~~e-------- 334 (411)
T PF06500_consen 289 VVALGAPVHH-----------FFTD-PE-WQQRV------------PDMYLDVLASRLGMA-AVSDESLRGE-------- 334 (411)
T ss_dssp EEEES---SC-----------GGH--HH-HHTTS-------------HHHHHHHHHHCT-S-CE-HHHHHHH--------
T ss_pred EeeeCchHhh-----------hhcc-HH-HHhcC------------CHHHHHHHHHHhCCc-cCCHHHHHHH--------
Confidence 9998875210 0100 00 00000 111111122222211 1122222111
Q ss_pred hHHHHHHHHhhcCCCCccccC--CCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELL--PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
+..++... .-.| .+..+|+|.|.|++|+++|.+-.+.+.....+.+...|+... +|.--| .-...+
T Consensus 335 -------l~~~SLk~--qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~--~~~gy~-~al~~~ 402 (411)
T PF06500_consen 335 -------LNKFSLKT--QGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKP--LHMGYP-QALDEI 402 (411)
T ss_dssp -------GGGGSTTT--TTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSS--HHHHHH-HHHHHH
T ss_pred -------HHhcCcch--hccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCc--cccchH-HHHHHH
Confidence 11222110 1123 567899999999999999988766666665556777887654 122223 344455
Q ss_pred HHHHHhc
Q 024900 239 ESFVTRH 245 (261)
Q Consensus 239 ~~fl~~~ 245 (261)
.+||++.
T Consensus 403 ~~Wl~~~ 409 (411)
T PF06500_consen 403 YKWLEDK 409 (411)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5677653
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.7e-09 Score=98.67 Aligned_cols=188 Identities=19% Similarity=0.211 Sum_probs=105.3
Q ss_pred cCCCCeEEEecCCCC---CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhhCcc
Q 024900 3 LAKSHRVYSIDLIGY---GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~---G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
.+.+|-|+.++.||- |+.-....+ .+......+++.+.+. ++.+.+. +++.+.|||+||+.++..+...|
T Consensus 420 ~~~G~~V~~~n~RGS~GyG~~F~~~~~--~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~- 495 (620)
T COG1506 420 ASAGYAVLAPNYRGSTGYGREFADAIR--GDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP- 495 (620)
T ss_pred hcCCeEEEEeCCCCCCccHHHHHHhhh--hccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-
Confidence 457899999999955 433111000 0112235555555544 4444443 47999999999999999999888
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
..++.|...+... +. . ...... .. + ...++ ........ ..+
T Consensus 496 ~f~a~~~~~~~~~--------~~-----~---~~~~~~-~~--~---~~~~~-------~~~~~~~~-~~~--------- 536 (620)
T COG1506 496 RFKAAVAVAGGVD--------WL-----L---YFGEST-EG--L---RFDPE-------ENGGGPPE-DRE--------- 536 (620)
T ss_pred hhheEEeccCcch--------hh-----h---hccccc-hh--h---cCCHH-------HhCCCccc-ChH---------
Confidence 4555544433110 00 0 000000 00 0 00000 00000000 000
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCC-CCh
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQD-EAP 231 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~-e~p 231 (261)
.+.. . .+-....+|++|+|+|||+.|.-+|.+.+.. +.......+++++|+.||..-- ++-
T Consensus 537 -------~~~~---~----sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~ 602 (620)
T COG1506 537 -------KYED---R----SPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENR 602 (620)
T ss_pred -------HHHh---c----ChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhH
Confidence 0100 0 0112356799999999999999999886544 3334445789999999999665 555
Q ss_pred hhHHHHHHHHHHhcCC
Q 024900 232 HLVNPLVESFVTRHAT 247 (261)
Q Consensus 232 ~~~~~~l~~fl~~~~~ 247 (261)
..+.+.+.+|++++..
T Consensus 603 ~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 603 VKVLKEILDWFKRHLK 618 (620)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 6677777788877654
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-08 Score=84.30 Aligned_cols=85 Identities=19% Similarity=0.263 Sum_probs=67.1
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC------CCeEEEEcChhHHHHHHHHhhCc-
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEP- 75 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~p- 75 (261)
|..+|.|++....||-.++...... .....|++++.++--.++++++.. .+++|+|||.|++|++++..+.+
T Consensus 29 l~~~~~i~~ish~Gh~~~~~~~~~~-~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~ 107 (266)
T PF10230_consen 29 LNPQFEILGISHAGHSTSPSNSKFS-PNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPD 107 (266)
T ss_pred CCCCCeeEEecCCCCcCCccccccc-CCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccc
Confidence 4678999999999998886541100 123578999998888888877644 36999999999999999999999
Q ss_pred --ccccceEEeecch
Q 024900 76 --EICRGMILLNISL 88 (261)
Q Consensus 76 --~~v~~lv~~~~~~ 88 (261)
.+|.+++++-+..
T Consensus 108 ~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 108 LKFRVKKVILLFPTI 122 (266)
T ss_pred cCCceeEEEEeCCcc
Confidence 7888888887643
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.1e-09 Score=85.25 Aligned_cols=84 Identities=10% Similarity=-0.007 Sum_probs=53.3
Q ss_pred CCCeEEEecCCCCCCCCCCC--CCCCC-CCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPN--PRDFF-DKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~--~~~~~-~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.+|.|+++|.+|+|.+.... ..... ........++.+-+..+.+..++ ++++|+|||+||.+++.+++.+|+.++
T Consensus 42 ~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~ 121 (212)
T TIGR01840 42 YGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFA 121 (212)
T ss_pred CCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhhe
Confidence 47999999999998654210 00000 00001112222222222223333 589999999999999999999999999
Q ss_pred ceEEeecch
Q 024900 80 GMILLNISL 88 (261)
Q Consensus 80 ~lv~~~~~~ 88 (261)
+++.+++.+
T Consensus 122 ~~~~~~g~~ 130 (212)
T TIGR01840 122 GGASNAGLP 130 (212)
T ss_pred EEEeecCCc
Confidence 999888753
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.4e-08 Score=93.90 Aligned_cols=77 Identities=14% Similarity=-0.042 Sum_probs=57.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--------------------CCCeEEEEcCh
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--------------------KDQAFFICNSI 62 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~--------------------~~~~~lvGhS~ 62 (261)
++.+|.|+.+|.||+|.|+.-. ..+. ..-++|..+.|+=+. -+++-++|.||
T Consensus 276 ~~rGYaVV~~D~RGtg~SeG~~-------~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 276 LPRGFAVVYVSGIGTRGSDGCP-------TTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HhCCeEEEEEcCCCCCCCCCcC-------ccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 4679999999999999997521 1112 223445555554443 35899999999
Q ss_pred hHHHHHHHHhhCcccccceEEeecc
Q 024900 63 GGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 63 Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
||.+++.+|...|+.++++|...+.
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCC
Confidence 9999999999999999999987643
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.5e-09 Score=87.80 Aligned_cols=72 Identities=24% Similarity=0.349 Sum_probs=65.4
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
|.||+|-+||||-|+.+.. ..++....|.-++.+|-.||..++.+=|-+||+.|+..+|..||+.|.|+=+-
T Consensus 189 FEVI~PSlPGygwSd~~sk------~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPSK------TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred EEEeccCCCCcccCcCCcc------CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 7899999999999998752 45788888999999999999999999999999999999999999999998654
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.2e-08 Score=100.27 Aligned_cols=77 Identities=13% Similarity=0.027 Sum_probs=65.9
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhh---Cccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVM---EPEI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~---~p~~ 77 (261)
.|+.+++|+++|++|+|.+.. ..++++++++++.+.+..+.. ++++++||||||.+|+++|.+ .+++
T Consensus 1090 ~l~~~~~v~~~~~~g~~~~~~---------~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~ 1160 (1296)
T PRK10252 1090 YLDPQWSIYGIQSPRPDGPMQ---------TATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEE 1160 (1296)
T ss_pred hcCCCCcEEEEECCCCCCCCC---------CCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCc
Confidence 467889999999999997642 237999999999999987764 489999999999999999995 5788
Q ss_pred ccceEEeecc
Q 024900 78 CRGMILLNIS 87 (261)
Q Consensus 78 v~~lv~~~~~ 87 (261)
|..++++++.
T Consensus 1161 v~~l~l~~~~ 1170 (1296)
T PRK10252 1161 VAFLGLLDTW 1170 (1296)
T ss_pred eeEEEEecCC
Confidence 9999999864
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=98.93 E-value=2e-08 Score=80.75 Aligned_cols=124 Identities=27% Similarity=0.337 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHh-----cCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHH
Q 024900 36 FETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNL 110 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (261)
+...++.+.++++.+ ..++++|+|.|.||.+++.+++.+|+.+.++|.+++..... ..
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~---------~~-------- 145 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPE---------SE-------- 145 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTG---------CC--------
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccc---------cc--------
Confidence 334444555555543 23579999999999999999999999999999998642100 00
Q ss_pred hhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEE
Q 024900 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLI 190 (261)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 190 (261)
. . .. ..... ++|+++
T Consensus 146 ---------------------------------~-~----------------------------~~-~~~~~--~~pi~~ 160 (216)
T PF02230_consen 146 ---------------------------------L-E----------------------------DR-PEALA--KTPILI 160 (216)
T ss_dssp ---------------------------------C-H----------------------------CC-HCCCC--TS-EEE
T ss_pred ---------------------------------c-c----------------------------cc-ccccC--CCcEEE
Confidence 0 0 00 00111 689999
Q ss_pred EecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 191 AWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 191 i~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
++|++|+++|.+.++. +.+...+.+++.++++||-.. ++ ..+.+.+||+++
T Consensus 161 ~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~---~~-~~~~~~~~l~~~ 215 (216)
T PF02230_consen 161 IHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS---PE-ELRDLREFLEKH 215 (216)
T ss_dssp EEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----HH-HHHHHHHHHHHH
T ss_pred EecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC---HH-HHHHHHHHHhhh
Confidence 9999999999876543 445545678999999999843 44 444677788764
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.8e-08 Score=82.50 Aligned_cols=76 Identities=14% Similarity=0.156 Sum_probs=58.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA-----SQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a-----~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
+..+..|+.+|.++=..+... .++++|. +.+..+++..+.+++.++|++.||++...+++.++.+
T Consensus 136 ~~~g~~vfvIsw~nPd~~~~~----------~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k 205 (445)
T COG3243 136 LEQGLDVFVISWRNPDASLAA----------KNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK 205 (445)
T ss_pred HHcCCceEEEeccCchHhhhh----------ccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc
Confidence 467889999998887777542 2566665 3444445556678999999999999999999988888
Q ss_pred -ccceEEeecch
Q 024900 78 -CRGMILLNISL 88 (261)
Q Consensus 78 -v~~lv~~~~~~ 88 (261)
|++++++.++.
T Consensus 206 ~I~S~T~lts~~ 217 (445)
T COG3243 206 RIKSLTLLTSPV 217 (445)
T ss_pred ccccceeeecch
Confidence 99999998654
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.9e-08 Score=77.70 Aligned_cols=125 Identities=17% Similarity=0.282 Sum_probs=80.2
Q ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHH-hhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhh
Q 024900 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAA-VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN 113 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a-~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (261)
+.++|.+.+.+-+... -++++|||||+|+..++.++ ...+.+|++++++++.... .. ...
T Consensus 38 ~~~~W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~----------~~--------~~~ 98 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAI-DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD----------DP--------EPF 98 (171)
T ss_dssp -HHHHHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG----------CH--------HCC
T ss_pred CHHHHHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc----------cc--------cch
Confidence 5788887777666543 35699999999999999999 7778999999999874110 00 000
Q ss_pred hhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEec
Q 024900 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWG 193 (261)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G 193 (261)
. ..+ ..+. .. -...+.+|.++|.+
T Consensus 99 ~-------~~~-----------~~f~-----------------------------------~~---p~~~l~~~~~viaS 122 (171)
T PF06821_consen 99 P-------PEL-----------DGFT-----------------------------------PL---PRDPLPFPSIVIAS 122 (171)
T ss_dssp T-------CGG-----------CCCT-----------------------------------TS---HCCHHHCCEEEEEE
T ss_pred h-------hhc-----------cccc-----------------------------------cC---cccccCCCeEEEEc
Confidence 0 000 0000 00 01223567799999
Q ss_pred CCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 194 DKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 194 ~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
++|+++|.+.++.+++... ++++.++++||+...+--..+-
T Consensus 123 ~nDp~vp~~~a~~~A~~l~-a~~~~~~~~GHf~~~~G~~~~p 163 (171)
T PF06821_consen 123 DNDPYVPFERAQRLAQRLG-AELIILGGGGHFNAASGFGPWP 163 (171)
T ss_dssp TTBSSS-HHHHHHHHHHHT--EEEEETS-TTSSGGGTHSS-H
T ss_pred CCCCccCHHHHHHHHHHcC-CCeEECCCCCCcccccCCCchH
Confidence 9999999998888887664 7999999999996654444443
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.6e-07 Score=78.44 Aligned_cols=190 Identities=18% Similarity=0.225 Sum_probs=93.2
Q ss_pred CCCeEEEecCCCCC-CCCCCCCC------C-----CCC-CCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHH
Q 024900 5 KSHRVYSIDLIGYG-YSDKPNPR------D-----FFD-KPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGL 65 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G-~S~~~~~~------~-----~~~-~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~ 65 (261)
.+|-|+++|.||.| .|...... . ..+ .+.|-+..+..|....++.+. .+++.+.|.|.||.
T Consensus 108 ~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~ 187 (320)
T PF05448_consen 108 AGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGG 187 (320)
T ss_dssp TT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHH
T ss_pred CCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchH
Confidence 67999999999999 34221100 0 001 222323444455555454442 35799999999999
Q ss_pred HHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhh--hHHHHHhhcChHHHHHHHHhhcCCCCC
Q 024900 66 VGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA--GKLFYKMVATSESVRNILCQCYNDTSQ 143 (261)
Q Consensus 66 va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (261)
+++.+|+..| +|++++...+.+. .+...+.......+. ...+++.... ...
T Consensus 188 lal~~aaLd~-rv~~~~~~vP~l~------------d~~~~~~~~~~~~~y~~~~~~~~~~d~--------------~~~ 240 (320)
T PF05448_consen 188 LALAAAALDP-RVKAAAADVPFLC------------DFRRALELRADEGPYPEIRRYFRWRDP--------------HHE 240 (320)
T ss_dssp HHHHHHHHSS-T-SEEEEESESSS------------SHHHHHHHT--STTTHHHHHHHHHHSC--------------THC
T ss_pred HHHHHHHhCc-cccEEEecCCCcc------------chhhhhhcCCccccHHHHHHHHhccCC--------------Ccc
Confidence 9999999886 5888887665321 111111100000000 0111110000 000
Q ss_pred CcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhh-hccCCCCccEEEcCCC
Q 024900 144 VTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNFDSVEDFIVLPNV 222 (261)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~~~~~~~~~i~~~ 222 (261)
..++.++.+ .|.+. .+..++|+|||++-.|-.|.++|+...-. +.++.-..++.++|..
T Consensus 241 ~~~~v~~~L-----------~Y~D~---------~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~ 300 (320)
T PF05448_consen 241 REPEVFETL-----------SYFDA---------VNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEY 300 (320)
T ss_dssp HHHHHHHHH-----------HTT-H---------HHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT-
T ss_pred cHHHHHHHH-----------hhhhH---------HHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCc
Confidence 001111110 11111 12346789999999999999999987543 4444434689999999
Q ss_pred CCCCCCCChhhH-HHHHHHHHHhc
Q 024900 223 GHCPQDEAPHLV-NPLVESFVTRH 245 (261)
Q Consensus 223 gH~~~~e~p~~~-~~~l~~fl~~~ 245 (261)
||. .+.++ .+....||.++
T Consensus 301 ~He----~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 301 GHE----YGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp -SS----TTHHHHHHHHHHHHHH-
T ss_pred CCC----chhhHHHHHHHHHHhcC
Confidence 996 44444 66666687654
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.2e-08 Score=80.23 Aligned_cols=206 Identities=17% Similarity=0.272 Sum_probs=103.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHH----HHhcCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWAS-QLNDFC----KDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~-dl~~~~----~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.+|.|.++|+||-|.|+.+..+ ...+.+.+|+. |+...+ +.+...+..+||||+||.+.-.+. ++| ++.
T Consensus 56 ~Gf~Vlt~dyRG~g~S~p~~~~----~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~ 129 (281)
T COG4757 56 AGFEVLTFDYRGIGQSRPASLS----GSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYA 129 (281)
T ss_pred cCceEEEEecccccCCCccccc----cCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccc
Confidence 6799999999999999865322 13455566542 333333 334456899999999998654444 466 566
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHH----hhhhhhhHHHHHhhcChHHHHHHHHhhcCC--CCCCcHHHHHHHh
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNL----LRNTAAGKLFYKMVATSESVRNILCQCYND--TSQVTEELVEKIL 153 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 153 (261)
+..+.++.... ..+.++ .+.+.-. +...++. +++....+ .++ .+++ ...+-.+|.+.+.
T Consensus 130 a~~vfG~gagw-----sg~m~~--~~~l~~~~l~~lv~p~lt--~w~g~~p~----~l~--G~G~d~p~~v~RdW~RwcR 194 (281)
T COG4757 130 AFAVFGSGAGW-----SGWMGL--RERLGAVLLWNLVGPPLT--FWKGYMPK----DLL--GLGSDLPGTVMRDWARWCR 194 (281)
T ss_pred eeeEecccccc-----ccchhh--hhcccceeeccccccchh--hccccCcH----hhc--CCCccCcchHHHHHHHHhc
Confidence 66555543221 011110 0000000 0000100 11111000 000 0110 0111122222221
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCcc--EEEcCC----CCCCCC
Q 024900 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPN----VGHCPQ 227 (261)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~--~~~i~~----~gH~~~ 227 (261)
.+..... +. .+. ..++..+++++|++.+...+|+++|+.+.+.+....+|+. ...++. -||+--
T Consensus 195 ~p~y~fd--dp--~~~------~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gy 264 (281)
T COG4757 195 HPRYYFD--DP--AMR------NYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGY 264 (281)
T ss_pred Ccccccc--Ch--hHh------HHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhh
Confidence 1110000 00 000 0123456789999999999999999988776665555543 344444 499988
Q ss_pred CCCh-hhHHHHHHHH
Q 024900 228 DEAP-HLVNPLVESF 241 (261)
Q Consensus 228 ~e~p-~~~~~~l~~f 241 (261)
+-+| |.+.+.+.+|
T Consensus 265 fR~~~Ealwk~~L~w 279 (281)
T COG4757 265 FREPFEALWKEMLGW 279 (281)
T ss_pred hccchHHHHHHHHHh
Confidence 8777 6555555444
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.1e-08 Score=80.78 Aligned_cols=155 Identities=21% Similarity=0.208 Sum_probs=86.5
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCC------CHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHHHHHHH
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFY------TFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAA 71 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~------~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~va~~~a 71 (261)
+.+|.|+++|+-+-.......... . ...+ ..+...+++...++.|. .+++.++|.||||.+++.+|
T Consensus 39 ~~Gy~v~~pD~f~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 39 EEGYVVLAPDLFGGRGAPPSDPEE-A-FAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HTT-EEEEE-CCCCTS--CCCHHC-H-HHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred hcCCCEEecccccCCCCCccchhh-H-HHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 368999999986655411111000 0 0000 02345566655565553 24799999999999999999
Q ss_pred hhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHH
Q 024900 72 VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEK 151 (261)
Q Consensus 72 ~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (261)
... +.+++.|..-+... . . . .
T Consensus 117 ~~~-~~~~a~v~~yg~~~------------~--------------~--------~-------------------~----- 137 (218)
T PF01738_consen 117 ARD-PRVDAAVSFYGGSP------------P--------------P--------P-------------------P----- 137 (218)
T ss_dssp CCT-TTSSEEEEES-SSS------------G--------------G--------G-------------------H-----
T ss_pred hhc-cccceEEEEcCCCC------------C--------------C--------c-------------------c-----
Confidence 877 67888876543000 0 0 0 0
Q ss_pred HhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhh----hhccCCCCccEEEcCCCCCCCC
Q 024900 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGR----AYGNFDSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~----~~~~~~~~~~~~~i~~~gH~~~ 227 (261)
.+....+++|+++++|++|++++.+..+ .+.+.....++++++|++|.-.
T Consensus 138 --------------------------~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~ 191 (218)
T PF01738_consen 138 --------------------------LEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFA 191 (218)
T ss_dssp --------------------------HHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTT
T ss_pred --------------------------hhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCccccc
Confidence 0012346789999999999999987532 3434455679999999999966
Q ss_pred CCChh--------hHHHHHHHHHHhc
Q 024900 228 DEAPH--------LVNPLVESFVTRH 245 (261)
Q Consensus 228 ~e~p~--------~~~~~l~~fl~~~ 245 (261)
..... +-.+.+.+|++++
T Consensus 192 ~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 192 NPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp STTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 43332 2234555677654
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.4e-09 Score=91.49 Aligned_cols=81 Identities=19% Similarity=0.241 Sum_probs=57.1
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccc----cc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI----CR 79 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~ 79 (261)
.+...+...|++|+|.+.+...+ ....++++.+.|.++.+..+.++++||||||||.++..++..+|+. |+
T Consensus 118 ~~~GY~~~~dL~g~gYDwR~~~~-----~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~ 192 (440)
T PLN02733 118 IKWGYKEGKTLFGFGYDFRQSNR-----LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVN 192 (440)
T ss_pred HHcCCccCCCcccCCCCcccccc-----HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhc
Confidence 33334558999999999764210 0112344454555555556678999999999999999999988874 78
Q ss_pred ceEEeecchh
Q 024900 80 GMILLNISLR 89 (261)
Q Consensus 80 ~lv~~~~~~~ 89 (261)
++|.++++..
T Consensus 193 ~~I~la~P~~ 202 (440)
T PLN02733 193 SWIAIAAPFQ 202 (440)
T ss_pred cEEEECCCCC
Confidence 8889987643
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.8e-07 Score=79.75 Aligned_cols=79 Identities=16% Similarity=0.103 Sum_probs=57.3
Q ss_pred CCCCeEEEecCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhhC-
Q 024900 4 AKSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVME- 74 (261)
Q Consensus 4 ~~~~~V~~~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~~- 74 (261)
.+...|+.+|+| |+|.|...... ...+..+.++|+.++++.+ ...+++|+||||||..+..+|..-
T Consensus 119 ~~~~~~l~iDqP~G~G~S~~~~~~-----~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~ 193 (462)
T PTZ00472 119 NNEAYVIYVDQPAGVGFSYADKAD-----YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRIN 193 (462)
T ss_pred ccccCeEEEeCCCCcCcccCCCCC-----CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHH
Confidence 356889999986 88888642211 1245678899998888743 347899999999999998887742
Q ss_pred ---------cccccceEEeecc
Q 024900 75 ---------PEICRGMILLNIS 87 (261)
Q Consensus 75 ---------p~~v~~lv~~~~~ 87 (261)
+-.++|+++-++.
T Consensus 194 ~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 194 MGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred hhccccCCceeeeEEEEEeccc
Confidence 1247888888764
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.6e-07 Score=70.79 Aligned_cols=145 Identities=18% Similarity=0.248 Sum_probs=93.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
.+|.|+-||+||-|+|...-.. ..=-.++.. -+.++++...-. .+.|.|.|.|+.|++.+|.+.|+. .+
T Consensus 59 ~G~atlRfNfRgVG~S~G~fD~-----GiGE~~Da~-aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~---~~ 129 (210)
T COG2945 59 RGFATLRFNFRGVGRSQGEFDN-----GIGELEDAA-AALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEI---LV 129 (210)
T ss_pred CCceEEeecccccccccCcccC-----CcchHHHHH-HHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccc---cc
Confidence 5799999999999999854210 111123322 233455555433 357999999999999999988764 23
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
+++..+. . ..
T Consensus 130 ~is~~p~---------~-----------------~~-------------------------------------------- 139 (210)
T COG2945 130 FISILPP---------I-----------------NA-------------------------------------------- 139 (210)
T ss_pred eeeccCC---------C-----------------Cc--------------------------------------------
Confidence 3332100 0 00
Q ss_pred HHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHH
Q 024900 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242 (261)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 242 (261)
+++ ..+.-..+|+++|+|+.|.++.++..-...+-.+ .+++.++++.|+.+- +-+.+.+.+.+||
T Consensus 140 ---~df----------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~-~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l 204 (210)
T COG2945 140 ---YDF----------SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIK-ITVITIPGADHFFHG-KLIELRDTIADFL 204 (210)
T ss_pred ---hhh----------hhccCCCCCceeEecChhhhhcHHHHHHhhcCCC-CceEEecCCCceecc-cHHHHHHHHHHHh
Confidence 000 0123356899999999999888775433333233 578899999999775 5566888888898
Q ss_pred H
Q 024900 243 T 243 (261)
Q Consensus 243 ~ 243 (261)
.
T Consensus 205 ~ 205 (210)
T COG2945 205 E 205 (210)
T ss_pred h
Confidence 5
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.6e-07 Score=77.91 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=49.9
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhC------cc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVME------PE 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~------p~ 76 (261)
.++.|+++|+|.......|. ...+..+..+.+.+..+.+++ +++.|+|+|+||.+++.++... +.
T Consensus 111 ~g~~Vv~vdYrlape~~~p~-------~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~ 183 (318)
T PRK10162 111 SGCTVIGIDYTLSPEARFPQ-------AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCG 183 (318)
T ss_pred cCCEEEEecCCCCCCCCCCC-------cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCcc
Confidence 37999999999755432221 111222222333333445554 5899999999999999999753 35
Q ss_pred cccceEEeecc
Q 024900 77 ICRGMILLNIS 87 (261)
Q Consensus 77 ~v~~lv~~~~~ 87 (261)
+++++|++.+.
T Consensus 184 ~~~~~vl~~p~ 194 (318)
T PRK10162 184 KVAGVLLWYGL 194 (318)
T ss_pred ChhheEEECCc
Confidence 78888888764
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.7e-08 Score=89.54 Aligned_cols=70 Identities=17% Similarity=0.139 Sum_probs=52.8
Q ss_pred CCCeEEEecCCCCCCCCCC-CCCC----CCCCCCC-----------CHHHHHHHHHHHHHHhc----------------C
Q 024900 5 KSHRVYSIDLIGYGYSDKP-NPRD----FFDKPFY-----------TFETWASQLNDFCKDVV----------------K 52 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~-~~~~----~~~~~~~-----------~~~~~a~dl~~~~~~l~----------------~ 52 (261)
.+|+|+++|+||||+|... ..+. ......| +++.++.|+..+...++ .
T Consensus 475 ~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~ 554 (792)
T TIGR03502 475 AGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDG 554 (792)
T ss_pred CCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCC
Confidence 6899999999999999542 1000 0001112 78999999999888776 2
Q ss_pred CCeEEEEcChhHHHHHHHHhhC
Q 024900 53 DQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
.+++++||||||.++..++...
T Consensus 555 ~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 555 SKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred CcEEEEecCHHHHHHHHHHHhc
Confidence 4899999999999999999853
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.9e-08 Score=78.28 Aligned_cols=50 Identities=20% Similarity=0.119 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchh
Q 024900 39 WASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (261)
Q Consensus 39 ~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 89 (261)
|.++..+++.... .+++.|+|.|.||.+|+.+|..+| .|+.+|.++++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 4455556666552 258999999999999999999998 8999999987644
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.7e-07 Score=74.63 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHHHHHh--------cCCCeEEEEcChhHHHHHHHHhhC-c----ccccceEEeecc
Q 024900 35 TFETWASQLNDFCKDV--------VKDQAFFICNSIGGLVGLQAAVME-P----EICRGMILLNIS 87 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l--------~~~~~~lvGhS~Gg~va~~~a~~~-p----~~v~~lv~~~~~ 87 (261)
++++=++||.++++.+ +.++++|+|||-|+--+++|.... + ..|++.|+-.+.
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE-
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCC
Confidence 4556677777666544 245899999999999999998864 2 679999888763
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.5e-06 Score=64.80 Aligned_cols=53 Identities=21% Similarity=0.248 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchh
Q 024900 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 89 (261)
.......+.+.++++....+.+.|||.||||+.|..+|.+++ +.+ |++|+...
T Consensus 40 ~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred cCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 345666777888888887778999999999999999999885 444 78897643
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.9e-06 Score=63.19 Aligned_cols=136 Identities=19% Similarity=0.238 Sum_probs=91.6
Q ss_pred CCCeEEEecCCCC-----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGY-----GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~-----G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.++.|.-|+++=+ |+- +|++. ...-...|...+.++...+...+.++-||||||.++-..|..-...|+
T Consensus 42 ~G~~vaRfefpYma~Rrtg~r-kPp~~-----~~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~ 115 (213)
T COG3571 42 RGWLVARFEFPYMAARRTGRR-KPPPG-----SGTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPID 115 (213)
T ss_pred CceeEEEeecchhhhccccCC-CCcCc-----cccCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcc
Confidence 4577777776543 322 22211 223356777778888887777899999999999999999887656699
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
+|++++=++-. .++ + +.
T Consensus 116 ~L~clgYPfhp--------pGK-------------------------P-------------------e~----------- 132 (213)
T COG3571 116 GLVCLGYPFHP--------PGK-------------------------P-------------------EQ----------- 132 (213)
T ss_pred eEEEecCccCC--------CCC-------------------------c-------------------cc-----------
Confidence 99988743110 000 0 00
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCC
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 226 (261)
...+.|..++.|++|.+|+.|.+-..+....|. ..+..++++++++.|-+
T Consensus 133 ----------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~-ls~~iev~wl~~adHDL 182 (213)
T COG3571 133 ----------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA-LSDPIEVVWLEDADHDL 182 (213)
T ss_pred ----------------chhhhccCCCCCeEEeecccccccCHHHHHhhh-cCCceEEEEeccCcccc
Confidence 001336778999999999999998776543333 23347999999999973
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.7e-07 Score=75.44 Aligned_cols=77 Identities=17% Similarity=0.019 Sum_probs=52.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cC--CCeEEEEcChhHHHHHHHHhhCccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VK--DQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~--~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
...+|-|++.|.||+|.|+-.. . .....-++|..+.|+=+ .. .+|-++|.|++|..++.+|+..|..
T Consensus 54 ~~~GY~vV~~D~RG~g~S~G~~-------~-~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~ 125 (272)
T PF02129_consen 54 AERGYAVVVQDVRGTGGSEGEF-------D-PMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPH 125 (272)
T ss_dssp HHTT-EEEEEE-TTSTTS-S-B---------TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TT
T ss_pred HhCCCEEEEECCcccccCCCcc-------c-cCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCC
Confidence 3578999999999999997431 1 11233345555544433 32 3799999999999999999988889
Q ss_pred ccceEEeecc
Q 024900 78 CRGMILLNIS 87 (261)
Q Consensus 78 v~~lv~~~~~ 87 (261)
+++++...+.
T Consensus 126 LkAi~p~~~~ 135 (272)
T PF02129_consen 126 LKAIVPQSGW 135 (272)
T ss_dssp EEEEEEESE-
T ss_pred ceEEEecccC
Confidence 9999887654
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.7e-06 Score=68.48 Aligned_cols=77 Identities=16% Similarity=0.165 Sum_probs=58.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-cCCCeEEEEcChhHHHHHHHHhh---Cccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVM---EPEI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-~~~~~~lvGhS~Gg~va~~~a~~---~p~~ 77 (261)
.|+..++|+++|++|+|.+.... .+++.+++++.+.+... ...+++++|||+||.++..++.. .++.
T Consensus 21 ~l~~~~~v~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~ 91 (212)
T smart00824 21 ALRGRRDVSALPLPGFGPGEPLP---------ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIP 91 (212)
T ss_pred hcCCCccEEEecCCCCCCCCCCC---------CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCC
Confidence 35677899999999999776432 35677776665555443 35689999999999999999986 4567
Q ss_pred ccceEEeecc
Q 024900 78 CRGMILLNIS 87 (261)
Q Consensus 78 v~~lv~~~~~ 87 (261)
+.+++++++.
T Consensus 92 ~~~l~~~~~~ 101 (212)
T smart00824 92 PAAVVLLDTY 101 (212)
T ss_pred CcEEEEEccC
Confidence 9999888764
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=1e-05 Score=65.87 Aligned_cols=140 Identities=19% Similarity=0.237 Sum_probs=91.6
Q ss_pred CCCCeEEEecCCCC-CCCCCCC--CCCCCC--CCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHHHHHHHh
Q 024900 4 AKSHRVYSIDLIGY-GYSDKPN--PRDFFD--KPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~-G~S~~~~--~~~~~~--~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~ 72 (261)
..+|-|+++|+-+. |.+..-. +..... ....+......|+...++.|. .+++.++|.||||.+++.++.
T Consensus 52 ~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~ 131 (236)
T COG0412 52 KAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAAT 131 (236)
T ss_pred hCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhc
Confidence 36899999999985 4442211 000000 001234677778877777764 356999999999999999999
Q ss_pred hCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH
Q 024900 73 MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (261)
Q Consensus 73 ~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (261)
..| .|++.|..-+.... .
T Consensus 132 ~~~-~v~a~v~fyg~~~~-------------------------------------------------~------------ 149 (236)
T COG0412 132 RAP-EVKAAVAFYGGLIA-------------------------------------------------D------------ 149 (236)
T ss_pred ccC-CccEEEEecCCCCC-------------------------------------------------C------------
Confidence 887 67777654321000 0
Q ss_pred hccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhc----cCCCCccEEEcCCCCCCCCC
Q 024900 153 LQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG----NFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~i~~~gH~~~~ 228 (261)
......++++|+|++.|+.|..+|......+. ......++.+++++.|..+-
T Consensus 150 ------------------------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~ 205 (236)
T COG0412 150 ------------------------DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFAN 205 (236)
T ss_pred ------------------------cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCcccccc
Confidence 00113468899999999999999987543332 22224688999999898764
Q ss_pred C
Q 024900 229 E 229 (261)
Q Consensus 229 e 229 (261)
+
T Consensus 206 ~ 206 (236)
T COG0412 206 D 206 (236)
T ss_pred C
Confidence 4
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.9e-06 Score=70.21 Aligned_cols=57 Identities=11% Similarity=0.085 Sum_probs=48.2
Q ss_pred CCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCC-CCCCChhhHHHHHHHHHH
Q 024900 186 CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC-PQDEAPHLVNPLVESFVT 243 (261)
Q Consensus 186 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~-~~~e~p~~~~~~l~~fl~ 243 (261)
-.+.+|.+++|.++|......+.++.|++++.++++ ||. ..+-+.+.|.+.|.+-++
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 458999999999999887778999999999999977 999 557788889888886553
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.3e-05 Score=60.79 Aligned_cols=135 Identities=16% Similarity=0.235 Sum_probs=91.3
Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhh
Q 024900 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN 113 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (261)
-..++|++.+.+-+... .++++||+||+|+..+..++.....+|+|..++.++... ++.. .
T Consensus 41 P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~----------~~~~-------~- 101 (181)
T COG3545 41 PVLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVS----------RPEI-------R- 101 (181)
T ss_pred CCHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcc----------cccc-------c-
Confidence 46788887777666555 456999999999999999999877799999998864210 0000 0
Q ss_pred hhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEec
Q 024900 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWG 193 (261)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G 193 (261)
. . ...+| ... . .....-|.++|..
T Consensus 102 ---~----~-----------~~~tf-----------------------------------~~~--p-~~~lpfps~vvaS 125 (181)
T COG3545 102 ---P----K-----------HLMTF-----------------------------------DPI--P-REPLPFPSVVVAS 125 (181)
T ss_pred ---h----h-----------hcccc-----------------------------------CCC--c-cccCCCceeEEEe
Confidence 0 0 00000 001 1 2334569999999
Q ss_pred CCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCC---ChhhHHHHHHHHHHh
Q 024900 194 DKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDE---APHLVNPLVESFVTR 244 (261)
Q Consensus 194 ~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e---~p~~~~~~l~~fl~~ 244 (261)
++|++++.+.++.+++... +.++...++||+--.. .=.+....+.+|+.+
T Consensus 126 rnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 126 RNDPYVSYEHAEDLANAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cCCCCCCHHHHHHHHHhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 9999999999888887765 6888999999984422 112345566666654
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.7e-06 Score=66.10 Aligned_cols=50 Identities=20% Similarity=0.262 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 38 TWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
.+++-+.+..++.++ ++++++|.|=||.|++.+.+.+|+.++++|++++.
T Consensus 82 ~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~ 133 (207)
T COG0400 82 KLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGM 133 (207)
T ss_pred HHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCc
Confidence 334444455556666 78999999999999999999999999999988763
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.3e-06 Score=67.55 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=49.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHh-----cCCCeEEEEcChhHHHHHHHHhhC-
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQL----NDFCKDV-----VKDQAFFICNSIGGLVGLQAAVME- 74 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl----~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~- 74 (261)
.+++++++|+......-.. .++.+.++.+ ..+++.+ ..++++||||||||.|+..+....
T Consensus 38 ~~~d~ft~df~~~~s~~~g----------~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~ 107 (225)
T PF07819_consen 38 SHFDFFTVDFNEELSAFHG----------RTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPN 107 (225)
T ss_pred cceeEEEeccCcccccccc----------ccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccc
Confidence 3578899998776433211 1333333333 3333333 356899999999999999888754
Q ss_pred --cccccceEEeecchh
Q 024900 75 --PEICRGMILLNISLR 89 (261)
Q Consensus 75 --p~~v~~lv~~~~~~~ 89 (261)
++.|+.+|.+++|..
T Consensus 108 ~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 108 YDPDSVKTIITLGTPHR 124 (225)
T ss_pred cccccEEEEEEEcCCCC
Confidence 357999999998643
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.9e-05 Score=62.05 Aligned_cols=190 Identities=13% Similarity=0.116 Sum_probs=84.2
Q ss_pred cCCCCeEEEecCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HhcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~---~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+.+|+|+-||-.-| |.|+.. ...|++....+++...++ ..|..++-||..|+.|.||++.|+.- .+
T Consensus 54 ~~NGFhViRyDsl~HvGlSsG~-------I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~l 124 (294)
T PF02273_consen 54 SANGFHVIRYDSLNHVGLSSGD-------INEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NL 124 (294)
T ss_dssp HTTT--EEEE---B--------------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----
T ss_pred hhCCeEEEeccccccccCCCCC-------hhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--Cc
Confidence 357899999999988 999753 145889888888876654 44677899999999999999999843 36
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCC-cHHHHHHHhccCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV-TEELVEKILQPGL 157 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 157 (261)
.-||...+..-+ -..+...+.....+... ..+... .-+ ..-.+ .+.++..++..++
T Consensus 125 sfLitaVGVVnl-------------r~TLe~al~~Dyl~~~i-~~lp~d--------ldf-eGh~l~~~vFv~dc~e~~w 181 (294)
T PF02273_consen 125 SFLITAVGVVNL-------------RDTLEKALGYDYLQLPI-EQLPED--------LDF-EGHNLGAEVFVTDCFEHGW 181 (294)
T ss_dssp SEEEEES--S-H-------------HHHHHHHHSS-GGGS-G-GG--SE--------EEE-TTEEEEHHHHHHHHHHTT-
T ss_pred ceEEEEeeeeeH-------------HHHHHHHhccchhhcch-hhCCCc--------ccc-cccccchHHHHHHHHHcCC
Confidence 666655543211 11111111111100000 000000 000 00001 1223333332221
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhh-hccC-CCCccEEEcCCCCCCCCCCChhhHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNF-DSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
.. .+ .+....+.++||++..++++|.|+....... +..+ .+.++++.++|++|-+.+ +|-
T Consensus 182 ~~--l~------------ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~e-nl~--- 243 (294)
T PF02273_consen 182 DD--LD------------STINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGE-NLV--- 243 (294)
T ss_dssp SS--HH------------HHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTS-SHH---
T ss_pred cc--ch------------hHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhhh-ChH---
Confidence 11 00 0123457789999999999999987765444 4444 345789999999999764 554
Q ss_pred HHHHHHHH
Q 024900 236 PLVESFVT 243 (261)
Q Consensus 236 ~~l~~fl~ 243 (261)
.+++|.+
T Consensus 244 -vlrnfy~ 250 (294)
T PF02273_consen 244 -VLRNFYQ 250 (294)
T ss_dssp -HHHHHHH
T ss_pred -HHHHHHH
Confidence 3444544
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.3e-05 Score=71.06 Aligned_cols=85 Identities=20% Similarity=0.160 Sum_probs=57.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
.++++|-|+.+..||-|.=.+...+. .......+++++++-+..++++ + .+++.+.|.|.||+++..++.++|++
T Consensus 470 l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl 548 (686)
T PRK10115 470 LLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPEL 548 (686)
T ss_pred HHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhh
Confidence 36789999999999965443211000 0001123566666555444433 4 25799999999999999999999999
Q ss_pred ccceEEeecc
Q 024900 78 CRGMILLNIS 87 (261)
Q Consensus 78 v~~lv~~~~~ 87 (261)
.+++|...+.
T Consensus 549 f~A~v~~vp~ 558 (686)
T PRK10115 549 FHGVIAQVPF 558 (686)
T ss_pred eeEEEecCCc
Confidence 9999876653
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.4e-05 Score=65.63 Aligned_cols=55 Identities=13% Similarity=0.060 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcc-----cccceEEeecchh
Q 024900 35 TFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE-----ICRGMILLNISLR 89 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lv~~~~~~~ 89 (261)
+....+.-+..++..| +++++.+|||||||..++.+...+-. .|..+|.|++++-
T Consensus 81 ~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 4556666666666555 57899999999999999999887422 5899999998653
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.9e-05 Score=63.98 Aligned_cols=188 Identities=20% Similarity=0.240 Sum_probs=100.8
Q ss_pred CCCCeEEEecCCCCCCCCC----CCCC--CCC-------C-CCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChh
Q 024900 4 AKSHRVYSIDLIGYGYSDK----PNPR--DFF-------D-KPFYTFETWASQLNDFCKDV------VKDQAFFICNSIG 63 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~----~~~~--~~~-------~-~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~G 63 (261)
+.+|.|++.|-||-|.|.. ++.. ..+ + ...|-+.....|+...++.+ ..+++.+.|.|-|
T Consensus 107 ~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqG 186 (321)
T COG3458 107 VAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQG 186 (321)
T ss_pred ccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccC
Confidence 3689999999999998832 2111 000 1 22333334444444444433 3468999999999
Q ss_pred HHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhh-HHHHHhhcChHHHHHHHHhhcCCCC
Q 024900 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG-KLFYKMVATSESVRNILCQCYNDTS 142 (261)
Q Consensus 64 g~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (261)
|.|++..|+..| ++++++..=+.+. + +...++......... ..||+. +.+
T Consensus 187 Gglalaaaal~~-rik~~~~~~Pfl~--d----------f~r~i~~~~~~~ydei~~y~k~--------------h~~-- 237 (321)
T COG3458 187 GGLALAAAALDP-RIKAVVADYPFLS--D----------FPRAIELATEGPYDEIQTYFKR--------------HDP-- 237 (321)
T ss_pred chhhhhhhhcCh-hhhcccccccccc--c----------chhheeecccCcHHHHHHHHHh--------------cCc--
Confidence 999999999776 6888875443221 1 001111000000000 001110 000
Q ss_pred CCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCC
Q 024900 143 QVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPN 221 (261)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~ 221 (261)
..++.++.+ .|.+. .+...+|++|+|+..|--|.++|+...-...+. ....++.+++.
T Consensus 238 -~e~~v~~TL-----------~yfD~---------~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~ 296 (321)
T COG3458 238 -KEAEVFETL-----------SYFDI---------VNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPY 296 (321)
T ss_pred -hHHHHHHHH-----------hhhhh---------hhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeec
Confidence 001111111 11111 233567999999999999999999865333333 33346667776
Q ss_pred CCCCCCCCChhhHHHHHHHHHHh
Q 024900 222 VGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 222 ~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
=+|. +-|.-.++.+-.|++.
T Consensus 297 ~aHe---~~p~~~~~~~~~~l~~ 316 (321)
T COG3458 297 FAHE---GGPGFQSRQQVHFLKI 316 (321)
T ss_pred cccc---cCcchhHHHHHHHHHh
Confidence 6666 5565555555566654
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.3e-06 Score=67.90 Aligned_cols=79 Identities=23% Similarity=0.324 Sum_probs=63.1
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhh---Cccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVM---EPEI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~---~p~~ 77 (261)
.|.+...|+..+-||+|.-..+ .-+++++++.-.+.|.+.. ..+++|+|||+||.||+++|.+ .-+.
T Consensus 22 ~l~~~~~v~~l~a~g~~~~~~~---------~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~ 92 (257)
T COG3319 22 ALGPLLPVYGLQAPGYGAGEQP---------FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEE 92 (257)
T ss_pred HhccCceeeccccCcccccccc---------cCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCe
Confidence 3566788999999999864432 2378888888877777765 4689999999999999999986 2457
Q ss_pred ccceEEeecchh
Q 024900 78 CRGMILLNISLR 89 (261)
Q Consensus 78 v~~lv~~~~~~~ 89 (261)
|..|+++|+.+.
T Consensus 93 Va~L~llD~~~~ 104 (257)
T COG3319 93 VAFLGLLDAVPP 104 (257)
T ss_pred EEEEEEeccCCC
Confidence 999999998754
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00011 Score=64.90 Aligned_cols=57 Identities=21% Similarity=0.320 Sum_probs=46.9
Q ss_pred CCCHHHHHHHHHHHHHHhc-----CCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchh
Q 024900 33 FYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (261)
Q Consensus 33 ~~~~~~~a~dl~~~~~~l~-----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 89 (261)
..|+++...-...|++... ..++.|||+-=||.-++.+|+.+|+.+.-+|+-+++..
T Consensus 115 gQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 115 GQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred CCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCcc
Confidence 4688888777777776653 24899999999999999999999999999988776543
|
Their function is unknown. |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=9.3e-06 Score=63.05 Aligned_cols=153 Identities=22% Similarity=0.201 Sum_probs=88.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHh-cCCCeEEEEcChhHHHHHHHHhh-Ccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC----KDV-VKDQAFFICNSIGGLVGLQAAVM-EPE 76 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~----~~l-~~~~~~lvGhS~Gg~va~~~a~~-~p~ 76 (261)
+-.+|+|.+. |||.+..- -++.....|....+ +.. +.+.+.+-|||-|+++++.+..+ +..
T Consensus 94 ~~~gY~vasv---gY~l~~q~----------htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~p 160 (270)
T KOG4627|consen 94 VRRGYRVASV---GYNLCPQV----------HTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSP 160 (270)
T ss_pred hhcCeEEEEe---ccCcCccc----------ccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCc
Confidence 4467888876 67888532 24555444443322 222 23457778899999999998876 455
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
+|.+++++++.+...+ +.... +++.-.++++..+..
T Consensus 161 rI~gl~l~~GvY~l~E------------------L~~te----------------------~g~dlgLt~~~ae~~---- 196 (270)
T KOG4627|consen 161 RIWGLILLCGVYDLRE------------------LSNTE----------------------SGNDLGLTERNAESV---- 196 (270)
T ss_pred hHHHHHHHhhHhhHHH------------------HhCCc----------------------cccccCcccchhhhc----
Confidence 7888887775422110 00000 000000111111000
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCC
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA 230 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 230 (261)
+ + ..+.+..++.|+|++.|+++...-.+..+.+......+++..+++.+|+-.+|+
T Consensus 197 ---------------S-c--dl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 197 ---------------S-C--DLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred ---------------C-c--cHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 0 0 013356788999999999997655555566665545589999999999955443
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=98.07 E-value=6.9e-06 Score=54.86 Aligned_cols=39 Identities=21% Similarity=0.402 Sum_probs=30.7
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK 48 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~ 48 (261)
..+|.|+++|+||||+|+.... ..-+++++++|+..+++
T Consensus 41 ~~G~~V~~~D~rGhG~S~g~rg------~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 41 EQGYAVFAYDHRGHGRSEGKRG------HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred hCCCEEEEECCCcCCCCCCccc------ccCCHHHHHHHHHHHhC
Confidence 4689999999999999985321 22378999999988763
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.2e-05 Score=56.68 Aligned_cols=61 Identities=21% Similarity=0.290 Sum_probs=53.8
Q ss_pred CCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 184 VKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 184 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
-..|+|+|.++.|+.+|.+.++.+++..++++++.+++.||......-..+.+++.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 3589999999999999999988888777779999999999998875567789999999964
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.8e-05 Score=66.09 Aligned_cols=74 Identities=20% Similarity=0.188 Sum_probs=53.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhcC--CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF-CKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~-~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
++-+|+|..+..|||+.|...+. ...+.+. +|.+.++ |..|+. +.++|.|||.||+-+.-+|..||+ |+
T Consensus 265 ~~lgYsvLGwNhPGFagSTG~P~------p~n~~nA-~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-Vk 336 (517)
T KOG1553|consen 265 AQLGYSVLGWNHPGFAGSTGLPY------PVNTLNA-ADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VK 336 (517)
T ss_pred HHhCceeeccCCCCccccCCCCC------cccchHH-HHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ce
Confidence 35689999999999998864321 1223333 3334444 666664 679999999999999999999996 88
Q ss_pred ceEEe
Q 024900 80 GMILL 84 (261)
Q Consensus 80 ~lv~~ 84 (261)
++|+=
T Consensus 337 avvLD 341 (517)
T KOG1553|consen 337 AVVLD 341 (517)
T ss_pred EEEee
Confidence 88753
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00053 Score=57.68 Aligned_cols=61 Identities=21% Similarity=0.294 Sum_probs=41.1
Q ss_pred CCCCCEEEEecCCCCCCCchhhhh----hccCC-CCccEEEcCCCCCCCCC--CChhhHHHHHHHHHHhcCCC
Q 024900 183 QVKCPVLIAWGDKDPWEPIELGRA----YGNFD-SVEDFIVLPNVGHCPQD--EAPHLVNPLVESFVTRHATP 248 (261)
Q Consensus 183 ~i~~Pvlii~G~~D~~~~~~~~~~----~~~~~-~~~~~~~i~~~gH~~~~--e~p~~~~~~l~~fl~~~~~~ 248 (261)
.-+.|++|.+|..|.++|....+. +.+.. .+.++..+++.+|.... ..|+.+ .|+...-..
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~-----~Wl~~rf~G 284 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDAL-----AWLDDRFAG 284 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHH-----HHHHHHHCC
Confidence 347899999999999999876543 33444 45677888999998542 333333 466654443
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00026 Score=59.56 Aligned_cols=60 Identities=18% Similarity=0.212 Sum_probs=45.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-------CCCeEEEEcChhHHHHHHHHhhC
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-------KDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-------~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
.+-+|+++.+||.|.|..+. +.++++.|-.+.++.|. .+++.+-|||+||.|+.++...+
T Consensus 170 ~~aNvl~fNYpGVg~S~G~~----------s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 170 LGANVLVFNYPGVGSSTGPP----------SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred cCCcEEEECCCccccCCCCC----------CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 45789999999999997542 45677766666666553 25799999999999998855544
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0011 Score=53.77 Aligned_cols=57 Identities=14% Similarity=0.084 Sum_probs=49.3
Q ss_pred EEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCC-CCCCChhhHHHHHHHHHHhc
Q 024900 188 VLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC-PQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 188 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~-~~~e~p~~~~~~l~~fl~~~ 245 (261)
+.++.+++|.++|......+.++.|++++..++ .||. ..+-+-++|.+.|.+-|.+.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhh
Confidence 678899999999998778899999999999998 6999 44778899999999888653
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00011 Score=57.94 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=42.9
Q ss_pred CCCCCCCEEEEecCCCCCCCchhhhh----hccCCC-CccEEEcCCCCCCCC-----CCChhh------HHHHHHHHHHh
Q 024900 181 LPQVKCPVLIAWGDKDPWEPIELGRA----YGNFDS-VEDFIVLPNVGHCPQ-----DEAPHL------VNPLVESFVTR 244 (261)
Q Consensus 181 l~~i~~Pvlii~G~~D~~~~~~~~~~----~~~~~~-~~~~~~i~~~gH~~~-----~e~p~~------~~~~l~~fl~~ 244 (261)
++.+++|||++.|+.|..+|+..... +.+... ..++.++++.||.-+ .+.||. -.+.+..|+++
T Consensus 160 ~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 160 IANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred HhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 34577999999999999999875433 332221 247999999999854 455543 33445556654
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.003 Score=54.48 Aligned_cols=61 Identities=18% Similarity=0.217 Sum_probs=47.2
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhh-hccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRA-YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
.++++|.++|.|..|.+..+..... +.++.....+..+||++|..-. ..+...+..|+...
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHH
Confidence 5669999999999999888877655 4555545678999999999666 55666677787653
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0019 Score=51.98 Aligned_cols=227 Identities=16% Similarity=0.160 Sum_probs=115.6
Q ss_pred CCCeEEEecCCCCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhC-c-cc
Q 024900 5 KSHRVYSIDLIGYGYSD---KPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVME-P-EI 77 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~---~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~-p-~~ 77 (261)
+.+.|+++--.||-.-. +-+++ -...+.|++++.++-=.+|++..-- .+++++|||-|+++.+++.... + -.
T Consensus 58 ~r~~~wtIsh~~H~~~P~sl~~~~s-~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~ 136 (301)
T KOG3975|consen 58 DRLPVWTISHAGHALMPASLREDHS-HTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFS 136 (301)
T ss_pred cccceeEEeccccccCCcccccccc-cccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccc
Confidence 44567777777775432 11111 0123568899988887888887753 5799999999999999998732 2 24
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHh-hcChHHHHHHHHhhcCCCCCCcHHHHHHHh---
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM-VATSESVRNILCQCYNDTSQVTEELVEKIL--- 153 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 153 (261)
|.+.+++=+..-....+...+...+....+... ..-..+.. ...+.+.+.++.+...-......+.+.+.+
T Consensus 137 vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv-----~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~ 211 (301)
T KOG3975|consen 137 VQKAVLLFPTIERMHESPNGIRLTKVLRYLPHV-----VSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLT 211 (301)
T ss_pred eEEEEEecchHHHHhcCCCceEeeeeeeeehhh-----hheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhh
Confidence 666666644321111111111111100000000 00000001 123444444443322222223334332211
Q ss_pred ccCCCCchHHHHH---HHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCc--cEEEcCCCCCCCCC
Q 024900 154 QPGLETGAADVFL---EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE--DFIVLPNVGHCPQD 228 (261)
Q Consensus 154 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~i~~~gH~~~~ 228 (261)
.+..-. ..+++ ++....+ ...+.+.+--+-+.+..|..|.|+|.+....++...|.. ++.+ +++-|..-.
T Consensus 212 h~~v~r--n~v~la~qEm~eV~~--~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~ 286 (301)
T KOG3975|consen 212 HPQVVR--NSVGLAAQEMEEVTT--RDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVV 286 (301)
T ss_pred cHHHHH--HHhhhchHHHHHHHH--hHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceee
Confidence 110000 00000 0000000 012233444578999999999999998887787665543 4444 788888777
Q ss_pred CChhhHHHHHHHHH
Q 024900 229 EAPHLVNPLVESFV 242 (261)
Q Consensus 229 e~p~~~~~~l~~fl 242 (261)
.+.+..+.++.+.+
T Consensus 287 ~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 287 KHAQYMANAVFDMI 300 (301)
T ss_pred cccHHHHHHHHHhh
Confidence 78888777777654
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00027 Score=56.60 Aligned_cols=49 Identities=24% Similarity=0.334 Sum_probs=29.3
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhhhccCCCC-ccEEEcCCCCCCCCCCCh
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQDEAP 231 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p 231 (261)
..|++|+|-|+|++|.+++++.++.+.+...+ .+++..+ +||..+...+
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 45799999999999999998777766655333 5666664 5899776443
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0047 Score=52.43 Aligned_cols=75 Identities=17% Similarity=0.119 Sum_probs=49.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhc--CCCeEEEEcChhHHHHHHHHhhCcc--
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC---KDVV--KDQAFFICNSIGGLVGLQAAVMEPE-- 76 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~---~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~-- 76 (261)
..++.|+++|+|---+-..| ..+++..+-+.-+. .+++ .+++.+.|+|-||.+++.++..-.+
T Consensus 108 ~~g~~vv~vdYrlaPe~~~p----------~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~ 177 (312)
T COG0657 108 AAGAVVVSVDYRLAPEHPFP----------AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRG 177 (312)
T ss_pred HcCCEEEecCCCCCCCCCCC----------chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcC
Confidence 46899999999876555332 13344322222222 2234 4679999999999999999986543
Q ss_pred --cccceEEeecch
Q 024900 77 --ICRGMILLNISL 88 (261)
Q Consensus 77 --~v~~lv~~~~~~ 88 (261)
...+.+++.+..
T Consensus 178 ~~~p~~~~li~P~~ 191 (312)
T COG0657 178 LPLPAAQVLISPLL 191 (312)
T ss_pred CCCceEEEEEeccc
Confidence 466777777653
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00034 Score=52.95 Aligned_cols=51 Identities=12% Similarity=0.028 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcc----cccceEEeecc
Q 024900 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE----ICRGMILLNIS 87 (261)
Q Consensus 37 ~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lv~~~~~ 87 (261)
....+++...++.. ...+++++|||+||.||..++...+. .+..++.++++
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 33444555555444 45789999999999999999998755 56667777754
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00039 Score=61.94 Aligned_cols=82 Identities=18% Similarity=0.139 Sum_probs=56.9
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-------CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-------~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
--||++..|-||+|..........-...|.+...+|+..|++.+.. .+++++|-|+||++|.-+-.+||+.|.
T Consensus 60 a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ 139 (434)
T PF05577_consen 60 ALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFD 139 (434)
T ss_dssp EEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-S
T ss_pred CcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeE
Confidence 4689999999999964321111123456889999999999877641 379999999999999999999999999
Q ss_pred ceEEeecch
Q 024900 80 GMILLNISL 88 (261)
Q Consensus 80 ~lv~~~~~~ 88 (261)
+.+.-+++.
T Consensus 140 ga~ASSapv 148 (434)
T PF05577_consen 140 GAWASSAPV 148 (434)
T ss_dssp EEEEET--C
T ss_pred EEEecccee
Confidence 998877654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00062 Score=58.39 Aligned_cols=79 Identities=15% Similarity=0.150 Sum_probs=44.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH---------------HHHHHHh------cCCCeEEEEcCh
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQL---------------NDFCKDV------VKDQAFFICNSI 62 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl---------------~~~~~~l------~~~~~~lvGhS~ 62 (261)
..+|-|+++|.+|+|+....... .....++...++.-+ ...++-| ..+++-++|+||
T Consensus 158 k~GYVvla~D~~g~GER~~~e~~--~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSm 235 (390)
T PF12715_consen 158 KRGYVVLAPDALGFGERGDMEGA--AQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSM 235 (390)
T ss_dssp TTTSEEEEE--TTSGGG-SSCCC--TTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGG
T ss_pred hCCCEEEEEcccccccccccccc--ccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecc
Confidence 36799999999999987643211 111223322222211 1122222 125799999999
Q ss_pred hHHHHHHHHhhCcccccceEEee
Q 024900 63 GGLVGLQAAVMEPEICRGMILLN 85 (261)
Q Consensus 63 Gg~va~~~a~~~p~~v~~lv~~~ 85 (261)
||..++.+|+.. ++|+..|..+
T Consensus 236 Gg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 236 GGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp GHHHHHHHHHH--TT--EEEEES
T ss_pred cHHHHHHHHHcc-hhhHhHhhhh
Confidence 999999999987 5788877655
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0004 Score=56.77 Aligned_cols=73 Identities=21% Similarity=0.221 Sum_probs=49.0
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----h------cCCCeEEEEcChhHHHHHHHHh
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-----V------VKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~-----l------~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
+-+|-|+++|+...+.-.... ..+. +.++.+++.+ + ...++.|.|||-||-+|+.+++
T Consensus 42 ShGyIVV~~d~~~~~~~~~~~----------~~~~-~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al 110 (259)
T PF12740_consen 42 SHGYIVVAPDLYSIGGPDDTD----------EVAS-AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMAL 110 (259)
T ss_pred hCceEEEEecccccCCCCcch----------hHHH-HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHh
Confidence 357999999977654422110 1122 2233333221 1 2357899999999999999999
Q ss_pred hC-----cccccceEEeecc
Q 024900 73 ME-----PEICRGMILLNIS 87 (261)
Q Consensus 73 ~~-----p~~v~~lv~~~~~ 87 (261)
.+ +.++++++++|+.
T Consensus 111 ~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 111 GNASSSLDLRFSALILLDPV 130 (259)
T ss_pred hhcccccccceeEEEEeccc
Confidence 87 6689999999974
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00077 Score=59.46 Aligned_cols=51 Identities=22% Similarity=0.188 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHh-----cCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 37 ETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 37 ~~~a~dl~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
..++++|.-++++. ..++..|.|+||||..|+.+++.+|+.+..++.++++
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 33456666666654 2346889999999999999999999999999999975
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00067 Score=53.97 Aligned_cols=69 Identities=22% Similarity=0.260 Sum_probs=46.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH----HHH-----hcCCCeEEEEcChhHHHHHHHHhhCc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF----CKD-----VVKDQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~----~~~-----l~~~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
.++.|+.+|+|=.-+. ++.+..+|+.+. ++. ...++++|+|+|-||.+++.++....
T Consensus 28 ~g~~v~~~~Yrl~p~~--------------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~ 93 (211)
T PF07859_consen 28 RGFVVVSIDYRLAPEA--------------PFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRAR 93 (211)
T ss_dssp HTSEEEEEE---TTTS--------------STTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHH
T ss_pred ccEEEEEeeccccccc--------------cccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhh
Confidence 5799999999943222 233444444433 333 23468999999999999999998654
Q ss_pred c----cccceEEeecc
Q 024900 76 E----ICRGMILLNIS 87 (261)
Q Consensus 76 ~----~v~~lv~~~~~ 87 (261)
+ .+++++++++.
T Consensus 94 ~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 94 DRGLPKPKGIILISPW 109 (211)
T ss_dssp HTTTCHESEEEEESCH
T ss_pred hhcccchhhhhccccc
Confidence 4 38999988874
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00085 Score=49.73 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
...+.+.+++++....++++.|||+||.+|..+++..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3345555555555556799999999999999999864
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00092 Score=58.64 Aligned_cols=52 Identities=17% Similarity=0.338 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCcc------cccceEEeecchh
Q 024900 38 TWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPE------ICRGMILLNISLR 89 (261)
Q Consensus 38 ~~a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~------~v~~lv~~~~~~~ 89 (261)
.+...|..+|+.. ..++++||||||||.++..+-...+. .|+++|.++++..
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 4455555555444 35799999999999999998887642 5999999997654
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0032 Score=50.57 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=36.7
Q ss_pred HHHHHhcC--CCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 45 DFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 45 ~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
.++.+..+ .++.+.|+|.||+.+..+++.|||.+.++.++++.+
T Consensus 87 ~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 87 YVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred hHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 34445554 489999999999999999999999999998887653
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0015 Score=53.45 Aligned_cols=49 Identities=18% Similarity=0.284 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhc-C--CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 39 WASQLNDFCKDVV-K--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 39 ~a~dl~~~~~~l~-~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+.++|..+|++.- . .+..|.|+||||..|+.++++||+...+++.+++.
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 3456666665542 2 23799999999999999999999999999999975
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0012 Score=56.21 Aligned_cols=56 Identities=21% Similarity=0.139 Sum_probs=42.5
Q ss_pred ccCCCCCCCEEEEecCCCCCCCchhhhhh-ccCCCCc--cEEEcCCCCCCCCCCChhhH
Q 024900 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVE--DFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 179 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~~~~~--~~~~i~~~gH~~~~e~p~~~ 234 (261)
.-+.+++.|++++.|..|.+.|....... ....++. -+..++++.|+-..|-++++
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 45788999999999999998777654322 2233433 57889999999998888875
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0015 Score=58.67 Aligned_cols=48 Identities=19% Similarity=0.185 Sum_probs=38.0
Q ss_pred CCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCCCCCCCCC
Q 024900 181 LPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 181 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~ 228 (261)
+-.++.|||+|.|..|..++++..+.+++ +....++++|.+++|..-.
T Consensus 300 Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 300 LLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred hHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 34467899999999999999887666553 4445689999999999664
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0015 Score=55.84 Aligned_cols=79 Identities=15% Similarity=0.056 Sum_probs=47.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----c--CCCeEEEEcChhHHHHHHHHhhCcc--
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----V--KDQAFFICNSIGGLVGLQAAVMEPE-- 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~--~~~~~lvGhS~Gg~va~~~a~~~p~-- 76 (261)
+++.|++.|....-...... .........+.|..++..| + .++++|||||+||.||-.++.....
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~-------a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ 175 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ-------AVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGG 175 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH-------HHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT--
T ss_pred CCceEEEEcchhhccccccc-------hhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcc
Confidence 47899999975432211000 0012233344444444443 2 4689999999999999999998766
Q ss_pred cccceEEeecchhh
Q 024900 77 ICRGMILLNISLRM 90 (261)
Q Consensus 77 ~v~~lv~~~~~~~~ 90 (261)
+|.+++-+|++...
T Consensus 176 ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 176 KIGRITGLDPAGPL 189 (331)
T ss_dssp -SSEEEEES-B-TT
T ss_pred eeeEEEecCccccc
Confidence 89999999986443
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0021 Score=55.29 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCc--ccccceEEeecchh
Q 024900 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP--EICRGMILLNISLR 89 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lv~~~~~~~ 89 (261)
.-+.+.+.|.+.+...+.+++.|+||||||.+..-++...+ .+|++++.++++-.
T Consensus 109 ~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 109 RGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 34455555666666667789999999999999998888887 89999999997643
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.073 Score=45.60 Aligned_cols=63 Identities=13% Similarity=0.065 Sum_probs=43.0
Q ss_pred CCCCCC-EEEEecCCCCCCCchh--hhhhccCCCCccEEEcCCCCCCCCCCChh-----hHHHHHHHHHHh
Q 024900 182 PQVKCP-VLIAWGDKDPWEPIEL--GRAYGNFDSVEDFIVLPNVGHCPQDEAPH-----LVNPLVESFVTR 244 (261)
Q Consensus 182 ~~i~~P-vlii~G~~D~~~~~~~--~~~~~~~~~~~~~~~i~~~gH~~~~e~p~-----~~~~~l~~fl~~ 244 (261)
....+| ++++.++.|.+..... ++.++...-..++.++++++|..++-.|. ++.+.+.+|+++
T Consensus 264 ~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 264 SGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred cccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 344555 9999999998765432 34455554345677899999998765554 456666777765
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0032 Score=50.77 Aligned_cols=35 Identities=14% Similarity=0.099 Sum_probs=29.7
Q ss_pred CCeEEEEcChhHHHHHHHHhhC----cccccceEEeecc
Q 024900 53 DQAFFICNSIGGLVGLQAAVME----PEICRGMILLNIS 87 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lv~~~~~ 87 (261)
+++.+.|||.||.+|...|+.. .++|.+++..|++
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 4699999999999999999873 4578888888875
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.09 Score=42.79 Aligned_cols=60 Identities=17% Similarity=0.152 Sum_probs=46.9
Q ss_pred CCCCCEEEEecCCCCCCCchhhhhh----ccCCCCccEEEcCCCCCCCCC-CChhhHHHHHHHHH
Q 024900 183 QVKCPVLIAWGDKDPWEPIELGRAY----GNFDSVEDFIVLPNVGHCPQD-EAPHLVNPLVESFV 242 (261)
Q Consensus 183 ~i~~Pvlii~G~~D~~~~~~~~~~~----~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~l~~fl 242 (261)
..++|-|+|.++.|.+++.+..+.. ++..-..+...+++++|..|+ ++|++..+.+.+||
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4569999999999999998754332 223223577788999999885 88999999999885
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0075 Score=46.63 Aligned_cols=49 Identities=12% Similarity=0.174 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhcC----CCeEEEEcChhHHHHHHHHhhCcccccceEEeecchh
Q 024900 38 TWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 89 (261)
...+.+.+.+..+.. +++.|||.|+||+.|..+|.++. ++ .|++|+...
T Consensus 41 ~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g--~~-aVLiNPAv~ 93 (180)
T PRK04940 41 HDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG--IR-QVIFNPNLF 93 (180)
T ss_pred HHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC--CC-EEEECCCCC
Confidence 334445555553221 57999999999999999999985 44 557888643
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.021 Score=50.06 Aligned_cols=83 Identities=17% Similarity=0.239 Sum_probs=55.6
Q ss_pred CCCeEEEecCCCCCCCCCC---CC---CCCCCCCCCCHHHH-HHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhh
Q 024900 5 KSHRVYSIDLIGYGYSDKP---NP---RDFFDKPFYTFETW-ASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~---~~---~~~~~~~~~~~~~~-a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.+|-|-.-..||--.|.+- ++ ..+. .+++.++ .-||-++|+.. +.++.+.||||-|+...+.+...
T Consensus 105 aGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW---~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~ 181 (403)
T KOG2624|consen 105 AGYDVWLGNNRGNTYSRKHKKLSPSSDKEFW---DFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSE 181 (403)
T ss_pred cCCceeeecCcCcccchhhcccCCcCCccee---ecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcc
Confidence 5688888888887777531 11 1111 2345443 23444444433 55789999999999999999998
Q ss_pred Ccc---cccceEEeecchhh
Q 024900 74 EPE---ICRGMILLNISLRM 90 (261)
Q Consensus 74 ~p~---~v~~lv~~~~~~~~ 90 (261)
.|+ +|+..+++.+...+
T Consensus 182 ~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 182 RPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred cchhhhhhheeeeecchhhh
Confidence 776 78999988876543
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.023 Score=54.09 Aligned_cols=84 Identities=12% Similarity=-0.024 Sum_probs=53.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
-..++-|+.+|.||-|-....-... ...-.....++...-+..+++..-+ +++.+.|+|.||++++.+....|+.+-
T Consensus 555 s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~f 634 (755)
T KOG2100|consen 555 SSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVF 634 (755)
T ss_pred ccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceE
Confidence 3467899999999998664321000 0011123445554444444443322 479999999999999999999986655
Q ss_pred ce-EEeec
Q 024900 80 GM-ILLNI 86 (261)
Q Consensus 80 ~l-v~~~~ 86 (261)
+- +.+.+
T Consensus 635 kcgvavaP 642 (755)
T KOG2100|consen 635 KCGVAVAP 642 (755)
T ss_pred EEEEEecc
Confidence 55 65554
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0033 Score=50.55 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHh
Q 024900 38 TWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~ 72 (261)
+++++|.+.++.... .++++|||||||.|+-.+..
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 344444444444444 37999999999999865444
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0044 Score=50.17 Aligned_cols=23 Identities=17% Similarity=0.160 Sum_probs=20.2
Q ss_pred CCCeEEEEcChhHHHHHHHHhhC
Q 024900 52 KDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
..++++.|||+||.+|..+|+..
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHH
Confidence 45799999999999999998864
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.005 Score=55.63 Aligned_cols=79 Identities=16% Similarity=0.073 Sum_probs=58.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYT--FETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~--~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+.+|-|+..|.||.|.|+.-- .. .++ .++ .-|+.+++.+.-. ++|-.+|.|++|+-.+.+|+..|..+
T Consensus 77 aa~GYavV~qDvRG~~~SeG~~-~~-----~~~~E~~D-g~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaL 149 (563)
T COG2936 77 AAQGYAVVNQDVRGRGGSEGVF-DP-----ESSREAED-GYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPAL 149 (563)
T ss_pred ecCceEEEEecccccccCCccc-ce-----eccccccc-hhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchh
Confidence 4678999999999999998421 11 111 122 2355566665543 58999999999999999999998889
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
+.++...+..
T Consensus 150 kai~p~~~~~ 159 (563)
T COG2936 150 KAIAPTEGLV 159 (563)
T ss_pred eeeccccccc
Confidence 9998877643
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0056 Score=47.59 Aligned_cols=71 Identities=23% Similarity=0.207 Sum_probs=53.4
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcc----
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE---- 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~---- 76 (261)
+++-|+.+|-+=|=-+.+ |.+..++|+.++++.. +.+++.|||.|+|+-|.--...+.|+
T Consensus 28 ~G~~VvGvdsl~Yfw~~r------------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~ 95 (192)
T PF06057_consen 28 QGVPVVGVDSLRYFWSER------------TPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRA 95 (192)
T ss_pred CCCeEEEechHHHHhhhC------------CHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHh
Confidence 678899888877776654 3456677777776655 56789999999999877776665544
Q ss_pred cccceEEeecc
Q 024900 77 ICRGMILLNIS 87 (261)
Q Consensus 77 ~v~~lv~~~~~ 87 (261)
+|.+++++++.
T Consensus 96 ~v~~v~Ll~p~ 106 (192)
T PF06057_consen 96 RVAQVVLLSPS 106 (192)
T ss_pred heeEEEEeccC
Confidence 68888888865
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0047 Score=50.48 Aligned_cols=37 Identities=30% Similarity=0.361 Sum_probs=33.8
Q ss_pred CCCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 52 KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
.++-.++|||+||.+++..-+.+|+.....++++++.
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 3568999999999999999999999999999999864
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0099 Score=47.72 Aligned_cols=73 Identities=16% Similarity=0.029 Sum_probs=36.8
Q ss_pred CCCCe---EEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hcCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 4 AKSHR---VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VVKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 4 ~~~~~---V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~----l~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
+.+|+ |++++.-....+.... ......+.+.+|.+|+++ -+. +|+||||||||+++-.+.... .
T Consensus 27 ~~GY~~~~vya~tyg~~~~~~~~~-------~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~-~ 97 (219)
T PF01674_consen 27 AAGYCDSEVYALTYGSGNGSPSVQ-------NAHMSCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG-G 97 (219)
T ss_dssp HTT--CCCEEEE--S-CCHHTHHH-------HHHB-HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC-T
T ss_pred HcCCCcceeEeccCCCCCCCCccc-------ccccchhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc-C
Confidence 46777 7988874443322110 001122334556655544 456 999999999999998887644 3
Q ss_pred cccceEEee
Q 024900 77 ICRGMILLN 85 (261)
Q Consensus 77 ~v~~lv~~~ 85 (261)
.++..+-+.
T Consensus 98 ~~d~~~~lg 106 (219)
T PF01674_consen 98 GADKVVNLG 106 (219)
T ss_dssp GGGTEEE--
T ss_pred CCCcccCcc
Confidence 344444443
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0071 Score=47.90 Aligned_cols=60 Identities=17% Similarity=0.223 Sum_probs=44.1
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
..|++|+|-|.|+.|.++|.+.+..+.+..+++.+..- .+||+.+-.+ .+.+-+.+|++.
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~H-pggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEH-PGGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEec-CCCccCCCch--HHHHHHHHHHHH
Confidence 46899999999999999999887778777776655444 5599977555 444555555543
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0058 Score=49.72 Aligned_cols=77 Identities=14% Similarity=0.068 Sum_probs=46.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhhCc-
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVMEP- 75 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p- 75 (261)
+-+|=|+++++-.- . .++..+ +.-+.+..++.+.+-+..+ ++.++.++|||+||..|+.+|+.+.
T Consensus 71 SHGfIVVAPQl~~~--~-~p~~~~----Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~ 143 (307)
T PF07224_consen 71 SHGFIVVAPQLYTL--F-PPDGQD----EIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYAT 143 (307)
T ss_pred hcCeEEEechhhcc--c-CCCchH----HHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccc
Confidence 45788999999753 1 122110 1112222222222222222 2358999999999999999999873
Q ss_pred -ccccceEEeecc
Q 024900 76 -EICRGMILLNIS 87 (261)
Q Consensus 76 -~~v~~lv~~~~~ 87 (261)
-.+.+||.+|+.
T Consensus 144 ~lkfsaLIGiDPV 156 (307)
T PF07224_consen 144 SLKFSALIGIDPV 156 (307)
T ss_pred cCchhheeccccc
Confidence 247788888764
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.14 Score=40.88 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=28.3
Q ss_pred cCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhh
Q 024900 51 VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRM 90 (261)
Q Consensus 51 ~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~ 90 (261)
+.++++||++|||-.+|..+....| ++.-|.+++.+.+
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCC
Confidence 3578999999999999988755443 6666777775544
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0083 Score=52.90 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHh
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
...+++.+++.+....++++.|||+||.+|..+|+
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 33444555555544568999999999999999865
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0087 Score=50.79 Aligned_cols=55 Identities=22% Similarity=0.346 Sum_probs=42.4
Q ss_pred CCHHHH-HHHHHHHHHHhcC-----CCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 34 YTFETW-ASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 34 ~~~~~~-a~dl~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
|.++++ ..+|-..+++... .+-.++||||||+=|+.+|+.+|++.+.+..+++..
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 677776 4455544443332 268999999999999999999999999999888754
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.012 Score=45.64 Aligned_cols=52 Identities=17% Similarity=0.086 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhcC-----CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 36 FETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
-+.-+.+|..|++.|.. ....++|||+|+.++-..+...+..+..+|+++++
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 34556777777776642 36899999999999988887767889999999875
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.084 Score=41.50 Aligned_cols=56 Identities=23% Similarity=0.553 Sum_probs=42.2
Q ss_pred CCCEEEEecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
..|.+.-||+.|+++|..-.+. +.......++..+++.+|. ..|+++.+ +..|+++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~---~~~~e~~~-~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHS---TSPQELDD-LKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccc---ccHHHHHH-HHHHHHH
Confidence 6799999999999999875433 4444444789999999999 67777764 4447765
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.013 Score=51.81 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHh
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
...+.+.++++.....++++.|||+||.+|..+|+
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34556666676665668999999999999999885
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0078 Score=54.68 Aligned_cols=80 Identities=19% Similarity=0.054 Sum_probs=55.7
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFF-DKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~-~~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
-+.+|-|+.+|-||.-+-.....+-+. .-....+++.++-+.-+.++.| .+++.+-|||+||++++..-.+||+-.
T Consensus 673 aslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~If 752 (867)
T KOG2281|consen 673 ASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIF 752 (867)
T ss_pred hhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCccee
Confidence 357899999999997665422100000 0012356777777766677765 368999999999999999999999866
Q ss_pred cceE
Q 024900 79 RGMI 82 (261)
Q Consensus 79 ~~lv 82 (261)
+..|
T Consensus 753 rvAI 756 (867)
T KOG2281|consen 753 RVAI 756 (867)
T ss_pred eEEe
Confidence 5443
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.11 Score=41.40 Aligned_cols=52 Identities=12% Similarity=0.062 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHHHhcC----CCeEEEEcChhHHHHHHHHh--hCcccccceEEeec
Q 024900 35 TFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAV--MEPEICRGMILLNI 86 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~--~~p~~v~~lv~~~~ 86 (261)
++.+-++||..++++++. ++++|+|||-|+-=.+-|.. ..|..|++.|+..+
T Consensus 85 slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqAp 142 (299)
T KOG4840|consen 85 SLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAP 142 (299)
T ss_pred cccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCc
Confidence 556668889998987764 37999999999986655552 34666777666554
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.0099 Score=48.34 Aligned_cols=74 Identities=16% Similarity=0.021 Sum_probs=47.0
Q ss_pred eEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhh----Cc----
Q 024900 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM----EP---- 75 (261)
Q Consensus 8 ~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~----~p---- 75 (261)
.|+.|.-|+.|.-..... ...+...-...+.+++..| +.++++|++||||+.|.++.... .+
T Consensus 50 ~~i~FsWPS~g~~~~Y~~------d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~ 123 (233)
T PF05990_consen 50 VVILFSWPSDGSLLGYFY------DRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDV 123 (233)
T ss_pred eEEEEEcCCCCChhhhhh------hhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhh
Confidence 789999998886422110 0112333344555555554 46789999999999999887553 21
Q ss_pred -ccccceEEeecc
Q 024900 76 -EICRGMILLNIS 87 (261)
Q Consensus 76 -~~v~~lv~~~~~ 87 (261)
.++..+|++.+.
T Consensus 124 ~~~~~~viL~ApD 136 (233)
T PF05990_consen 124 KARFDNVILAAPD 136 (233)
T ss_pred HhhhheEEEECCC
Confidence 256777777653
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.011 Score=54.94 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=26.0
Q ss_pred CeEEEEcChhHHHHHHHHhh---CcccccceEEeecc
Q 024900 54 QAFFICNSIGGLVGLQAAVM---EPEICRGMILLNIS 87 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~---~p~~v~~lv~~~~~ 87 (261)
.++||||||||.||...+.. .+..|.-++..+++
T Consensus 183 sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred eEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 39999999999999887763 25567777776664
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.031 Score=49.33 Aligned_cols=80 Identities=21% Similarity=0.231 Sum_probs=54.1
Q ss_pred CCCeEEEecCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh---
Q 024900 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (261)
Q Consensus 5 ~~~~V~~~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~--- 73 (261)
+..+|+.+|+| |.|-|....... ...+.++.++|+.+++..+ ...+++|.|-|+||.-+-.+|..
T Consensus 84 ~~an~l~iD~PvGtGfS~~~~~~~----~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 84 KFANLLFIDQPVGTGFSYGNDPSD----YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp GTSEEEEE--STTSTT-EESSGGG----GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccceEEEeecCceEEeecccccc----ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 56899999955 999996433211 2347788899998887765 23489999999999976666552
Q ss_pred -C------cccccceEEeecch
Q 024900 74 -E------PEICRGMILLNISL 88 (261)
Q Consensus 74 -~------p~~v~~lv~~~~~~ 88 (261)
. +-.++|+++.|+..
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-S
T ss_pred ccccccccccccccceecCccc
Confidence 3 33488998888643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.014 Score=50.98 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhh
Q 024900 38 TWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~ 73 (261)
++.++|..+++....+ ++++.||||||.+|...|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3445555656554433 68999999999999998875
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.02 Score=49.55 Aligned_cols=81 Identities=17% Similarity=0.163 Sum_probs=53.1
Q ss_pred CeEEEecCCCCCCCCCCCCC---CCCCCCCCC----HHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCccc
Q 024900 7 HRVYSIDLIGYGYSDKPNPR---DFFDKPFYT----FETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~---~~~~~~~~~----~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
--+|....|=||+|-.--.+ +.......| ++++|..|..+...++. .+++.+|-|+|||++.=+=.+||+.
T Consensus 112 AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi 191 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI 191 (492)
T ss_pred ceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhh
Confidence 45788899999999532111 001112233 44444444444333332 4799999999999999999999999
Q ss_pred ccceEEeecc
Q 024900 78 CRGMILLNIS 87 (261)
Q Consensus 78 v~~lv~~~~~ 87 (261)
|.|...-+.+
T Consensus 192 v~GAlAaSAP 201 (492)
T KOG2183|consen 192 VLGALAASAP 201 (492)
T ss_pred hhhhhhccCc
Confidence 9988666654
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.017 Score=50.50 Aligned_cols=20 Identities=20% Similarity=0.192 Sum_probs=18.1
Q ss_pred CeEEEEcChhHHHHHHHHhh
Q 024900 54 QAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~ 73 (261)
++++.||||||.+|...|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 39999999999999999874
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.012 Score=51.65 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=31.1
Q ss_pred cCCCeEEEEcChhHHHHHHHHhhCcc--------cccceEEeecch
Q 024900 51 VKDQAFFICNSIGGLVGLQAAVMEPE--------ICRGMILLNISL 88 (261)
Q Consensus 51 ~~~~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lv~~~~~~ 88 (261)
|.++++||+|||||.+.+.+..++++ .+++++-++++.
T Consensus 180 G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 180 GGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred CCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 44899999999999999999988876 477777776543
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.025 Score=51.43 Aligned_cols=37 Identities=11% Similarity=0.086 Sum_probs=29.5
Q ss_pred CCCeEEEEcChhHHHHHHHHhhC---------------cccccceEEeecch
Q 024900 52 KDQAFFICNSIGGLVGLQAAVME---------------PEICRGMILLNISL 88 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~---------------p~~v~~lv~~~~~~ 88 (261)
.++++||||||||.+++.+-..- -..|++.|.++++.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 57999999999999999976532 23588999988764
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.027 Score=48.48 Aligned_cols=34 Identities=9% Similarity=0.084 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhC
Q 024900 41 SQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 41 ~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~ 74 (261)
++|..+++....+ ++++.|||+||.+|...|...
T Consensus 186 ~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 186 EEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 4444555544433 489999999999999998853
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.036 Score=45.90 Aligned_cols=65 Identities=22% Similarity=0.422 Sum_probs=45.6
Q ss_pred CCCCC-CCEEEEecCCCCCCCchhhhh-hccCCC-CccEEEcCCCCCCCCCCChh---hHHHHHHHHHHhc
Q 024900 181 LPQVK-CPVLIAWGDKDPWEPIELGRA-YGNFDS-VEDFIVLPNVGHCPQDEAPH---LVNPLVESFVTRH 245 (261)
Q Consensus 181 l~~i~-~Pvlii~G~~D~~~~~~~~~~-~~~~~~-~~~~~~i~~~gH~~~~e~p~---~~~~~l~~fl~~~ 245 (261)
+.++. +|+|+++|.+|..+|...+.. +..... ..+..++++++|......+. +....+.+|+.++
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 34454 899999999999999887654 333322 35777889999997754433 5666677787664
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.0071 Score=52.85 Aligned_cols=35 Identities=26% Similarity=0.261 Sum_probs=25.7
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
+++.++|||+||.-+++.+... .+++..|++|++.
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWM 262 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH--TT--EEEEES---
T ss_pred hheeeeecCchHHHHHHHHhhc-cCcceEEEeCCcc
Confidence 4689999999999999888766 6799999999864
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.061 Score=47.68 Aligned_cols=83 Identities=14% Similarity=0.132 Sum_probs=64.0
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-------CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-------~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
+-.|+....|=||+|.....-....-...+......||.++|++++. .+.+.+|-|+-|.++.-+=..|||.|
T Consensus 118 gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~ 197 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELT 197 (514)
T ss_pred CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhh
Confidence 45799999999999954321111122345777888899999988864 27889999999999999999999999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
.|-|..+++.
T Consensus 198 ~GsvASSapv 207 (514)
T KOG2182|consen 198 VGSVASSAPV 207 (514)
T ss_pred eeecccccce
Confidence 9998877664
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.041 Score=47.17 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=29.6
Q ss_pred cCCCeEEEEcChhHHHHHHHHhhCccc-----ccceEEeecch
Q 024900 51 VKDQAFFICNSIGGLVGLQAAVMEPEI-----CRGMILLNISL 88 (261)
Q Consensus 51 ~~~~~~lvGhS~Gg~va~~~a~~~p~~-----v~~lv~~~~~~ 88 (261)
+..+++|||||+|+.+.+.+.....++ |..+++++++.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 556899999999999998876654443 78888887653
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.04 Score=49.23 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHh
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
.....+.+++++....++++.|||+||.+|..+|+
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 34555666666655668999999999999999985
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.045 Score=47.82 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhh
Q 024900 41 SQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 41 ~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~ 73 (261)
++|..+++....+ ++++.|||+||.+|...|..
T Consensus 201 ~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 201 GELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3344555544332 59999999999999999874
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.069 Score=46.65 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhc---C-CCeEEEEcChhHHHHHHHHhh
Q 024900 40 ASQLNDFCKDVV---K-DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 40 a~dl~~~~~~l~---~-~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.++|..+++.+. . -++++.|||+||.+|...|..
T Consensus 192 l~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 192 MQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344455555442 1 269999999999999988864
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.04 Score=44.68 Aligned_cols=44 Identities=14% Similarity=-0.015 Sum_probs=33.1
Q ss_pred HHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc-----cccceEEeecch
Q 024900 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-----ICRGMILLNISL 88 (261)
Q Consensus 45 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lv~~~~~~ 88 (261)
.+.++.++.++.+|||||||.=...|+..|-. .+..+|.+++++
T Consensus 128 yL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 128 YLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 33444567899999999999988888875422 488888888754
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.052 Score=48.53 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhC
Q 024900 40 ASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 40 a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~ 74 (261)
.++|..+++....+ ++++.|||+||.+|...|...
T Consensus 315 l~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 315 VGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 33445555544333 689999999999999988753
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.0056 Score=48.13 Aligned_cols=52 Identities=12% Similarity=0.171 Sum_probs=37.3
Q ss_pred CCCHHHHHHHHHHHHHHhc-------CCCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 33 FYTFETWASQLNDFCKDVV-------KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 33 ~~~~~~~a~dl~~~~~~l~-------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
.|.+.+|+ ..++.+.++ ..++.|.||||||.=|+..+++.|.+.+++..+.+
T Consensus 116 ~yrMYdYv--~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 116 HYRMYDYV--VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred hhhHHHHH--HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 35555553 234444333 24789999999999999999999999888765543
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.066 Score=48.05 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=18.8
Q ss_pred CCeEEEEcChhHHHHHHHHhh
Q 024900 53 DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~ 73 (261)
-++++.|||+||.+|...|..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 379999999999999999864
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.16 Score=42.27 Aligned_cols=49 Identities=16% Similarity=0.172 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 40 ASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 40 a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
++-+..++.+.+++ +|.+.|.|-||..+..+++.+|+...++.++.+..
T Consensus 129 r~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 129 RALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 33334445555665 79999999999999999999999999999888653
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.037 Score=48.81 Aligned_cols=59 Identities=22% Similarity=0.213 Sum_probs=40.7
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC-CCC------------------------ccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF-DSV------------------------EDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~-~~~------------------------~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
.++|||..|..|.++|....+. +.++ .+. -++..|.+|||+.+.++|+....++
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4899999999999888654322 2221 111 1478889999999999999999999
Q ss_pred HHHHH
Q 024900 239 ESFVT 243 (261)
Q Consensus 239 ~~fl~ 243 (261)
+.|++
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99985
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.13 Score=39.13 Aligned_cols=51 Identities=12% Similarity=0.225 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
+....++.+..++..++.+...|||-|+||+.|..++.++- ++++ ++|+..
T Consensus 41 ~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--irav-~~NPav 91 (191)
T COG3150 41 DPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IRAV-VFNPAV 91 (191)
T ss_pred CHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Chhh-hcCCCc
Confidence 57788889999999988888999999999999999999873 6666 467654
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.15 E-value=1 Score=38.78 Aligned_cols=61 Identities=16% Similarity=0.250 Sum_probs=45.6
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
.++.+|..||.|..|.+.++..+..|-. ++...-+..+|+..|. ..+.-+...|..|+...
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~---~~n~~i~esl~~flnrf 387 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHN---LINQFIKESLEPFLNRF 387 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcch---hhHHHHHHHHHHHHHHH
Confidence 5678999999999999888887766544 4444567888999998 55666667777777643
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.095 Score=43.61 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=34.8
Q ss_pred HHHhcC--CCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 47 CKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 47 ~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
.++.++ +++.++|.|+||+-++.++..+|+..++.+.+++
T Consensus 261 as~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 261 ASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred hhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 344454 4799999999999999999999999999999886
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.074 Score=44.28 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=31.4
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
..-+|.|-|+||.+++..++.||+.+..++..++.
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 35779999999999999999999999999887764
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.091 Score=47.59 Aligned_cols=77 Identities=16% Similarity=0.030 Sum_probs=49.6
Q ss_pred CeEEEecCC----CCCCCCCCCCCCCCCCCCCCHHHHHH---HHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhh--Cc
Q 024900 7 HRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVM--EP 75 (261)
Q Consensus 7 ~~V~~~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~a~---dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~--~p 75 (261)
+-|++++.| ||+.+..... ...+.+.+... -+.+-+...++ ++++|.|+|-||..+..++.. .+
T Consensus 126 ~~vv~~~yRlg~~g~~~~~~~~~-----~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~ 200 (493)
T cd00312 126 VIVVSINYRLGVLGFLSTGDIEL-----PGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSK 200 (493)
T ss_pred EEEEEecccccccccccCCCCCC-----CcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchh
Confidence 788888888 5554432110 01233444332 22333555555 479999999999999888875 35
Q ss_pred ccccceEEeecch
Q 024900 76 EICRGMILLNISL 88 (261)
Q Consensus 76 ~~v~~lv~~~~~~ 88 (261)
.+++++|++++..
T Consensus 201 ~lf~~~i~~sg~~ 213 (493)
T cd00312 201 GLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHhhhcCCc
Confidence 6799999888654
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.09 Score=47.17 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhc---C-CCeEEEEcChhHHHHHHHHhh
Q 024900 40 ASQLNDFCKDVV---K-DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 40 a~dl~~~~~~l~---~-~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.++|..+++.+. . -++++.|||+||.+|...|..
T Consensus 301 l~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 301 MEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345555555443 1 269999999999999998864
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.093 Score=47.01 Aligned_cols=20 Identities=20% Similarity=0.248 Sum_probs=18.3
Q ss_pred CeEEEEcChhHHHHHHHHhh
Q 024900 54 QAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~ 73 (261)
++++.|||+||.+|...|..
T Consensus 299 sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 69999999999999998864
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.11 Score=46.73 Aligned_cols=20 Identities=20% Similarity=0.170 Sum_probs=18.0
Q ss_pred CeEEEEcChhHHHHHHHHhh
Q 024900 54 QAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~ 73 (261)
++++.|||+||.+|...|..
T Consensus 295 sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 295 SITVTGHSLGASLALVSAYD 314 (527)
T ss_pred eEEEeccchHHHHHHHHHHH
Confidence 69999999999999988863
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.22 Score=42.38 Aligned_cols=41 Identities=12% Similarity=0.163 Sum_probs=33.3
Q ss_pred HHHhcCCCeEEEEcChhHHHHHHHHhhCcc-cccceEEeecc
Q 024900 47 CKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNIS 87 (261)
Q Consensus 47 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lv~~~~~ 87 (261)
....+..+++||||..|+..+.++.+..+. .+++||++++.
T Consensus 187 ~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 187 AQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred HHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 333455569999999999999999998754 59999999963
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.11 Score=44.57 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhh
Q 024900 37 ETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 37 ~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
..+.+++..+++....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4666777777777776689999999999999998874
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.14 Score=46.76 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=19.0
Q ss_pred CCeEEEEcChhHHHHHHHHhh
Q 024900 53 DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~ 73 (261)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 479999999999999999875
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.36 Score=41.21 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=42.6
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC------------------------CCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF------------------------DSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~------------------------~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
.++|||..|+.|.+++.-..+. +..+ .++-++..+.+|||+.+ ++|+....++.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999998777643221 1111 01135677789999997 59999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.2 Score=38.94 Aligned_cols=37 Identities=14% Similarity=0.056 Sum_probs=30.3
Q ss_pred CCCeEEEEcChhHHHHHHHHhh------CcccccceEEeecch
Q 024900 52 KDQAFFICNSIGGLVGLQAAVM------EPEICRGMILLNISL 88 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~------~p~~v~~lv~~~~~~ 88 (261)
..+++|+|.|-|+.|+..++.. ..++|.++|+++-+.
T Consensus 80 ~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 80 NTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred CCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 4589999999999999999876 456889999987553
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.17 Score=43.23 Aligned_cols=39 Identities=15% Similarity=0.264 Sum_probs=26.5
Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHh
Q 024900 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
|+-..+..-|..+.+....++++|++||||..+.++...
T Consensus 172 ~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~Lr 210 (377)
T COG4782 172 YSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALR 210 (377)
T ss_pred hhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHH
Confidence 444444444444444445678999999999999887644
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.24 Score=42.28 Aligned_cols=76 Identities=16% Similarity=0.181 Sum_probs=47.4
Q ss_pred CeEEEecCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh----C
Q 024900 7 HRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM----E 74 (261)
Q Consensus 7 ~~V~~~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~----~ 74 (261)
.+|+.+|.| |-|-|-...+. ...+-+..++|+..++..+ ...+++|.|-|+||.-+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~-----~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n 76 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPI-----DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGN 76 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCC-----CccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhc
Confidence 478999999 88888532211 1112223446666655543 23579999999999966666552 1
Q ss_pred ------cccccceEEeecc
Q 024900 75 ------PEICRGMILLNIS 87 (261)
Q Consensus 75 ------p~~v~~lv~~~~~ 87 (261)
+=.++|+++-++.
T Consensus 77 ~~~~~~~inLkGi~IGNg~ 95 (319)
T PLN02213 77 YICCEPPINLQGYMLGNPV 95 (319)
T ss_pred ccccCCceeeeEEEeCCCC
Confidence 1246788777753
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.28 Score=42.76 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=30.4
Q ss_pred CeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+++++|+|.||++|...|.-.|..+++++=-+++
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 8999999999999999999999999998755554
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=91.05 E-value=0.28 Score=37.47 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=34.8
Q ss_pred HHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 48 KDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 48 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
+.....+..+-|.||||.-|..+..++|+...++|.+++..
T Consensus 96 eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 96 EEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred HhhcCCCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 33334568889999999999999999999999999998754
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.72 Score=38.87 Aligned_cols=56 Identities=14% Similarity=-0.033 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcc--cccceEEeecchhh
Q 024900 35 TFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNISLRM 90 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lv~~~~~~~~ 90 (261)
++.+.++.+++-+.... .+-+++||+|=||.++-.++.+.|+ .|+.+|.++++..+
T Consensus 74 ~~~~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 74 PLTQQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred CHHHHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 56666666655444321 2359999999999999999999987 59999999986543
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.76 E-value=0.39 Score=43.73 Aligned_cols=54 Identities=20% Similarity=0.385 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhh-----Ccc------cccceEEeecch
Q 024900 35 TFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVM-----EPE------ICRGMILLNISL 88 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~-----~p~------~v~~lv~~~~~~ 88 (261)
++..-.+.+.+.+.+.++ .+++.|||||||.++=.+.+. .|+ -.+|+++++.+.
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 444445555555555544 479999999999987766543 232 356677777654
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=90.50 E-value=0.66 Score=41.40 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=43.4
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC-C-----------------------CCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF-D-----------------------SVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~-~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
.++|||..|+.|.++|....+. +..+ . ++-++..+.+|||+.+ .+|+....++.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999999887754332 1111 0 0124677889999997 59999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99964
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=90.32 E-value=0.69 Score=36.73 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhC
Q 024900 36 FETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+.+..+-...++++.+. .+++|+|||=|+++..++...+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 33444444455666654 5899999999999999998754
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=89.72 E-value=1.1 Score=40.01 Aligned_cols=77 Identities=18% Similarity=0.269 Sum_probs=47.4
Q ss_pred CCCeEEEec-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh---
Q 024900 5 KSHRVYSID-LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (261)
Q Consensus 5 ~~~~V~~~D-l~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~--- 73 (261)
+..+|+.+| .-|.|-|....... ..-+. +.++++.+++... ...+++|.|.|+||.-+-.+|..
T Consensus 114 ~~anllfiDqPvGtGfSy~~~~~~----~~~d~-~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~ 188 (433)
T PLN03016 114 KMANIIFLDQPVGSGFSYSKTPID----KTGDI-SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQ 188 (433)
T ss_pred hcCcEEEecCCCCCCccCCCCCCC----ccCCH-HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHh
Confidence 457899999 77999985332111 01122 2335555555443 23579999999999966666542
Q ss_pred -C------cccccceEEeec
Q 024900 74 -E------PEICRGMILLNI 86 (261)
Q Consensus 74 -~------p~~v~~lv~~~~ 86 (261)
. +-.++|+++-++
T Consensus 189 ~n~~~~~~~inLkGi~iGNg 208 (433)
T PLN03016 189 GNYICCEPPINLQGYMLGNP 208 (433)
T ss_pred hcccccCCcccceeeEecCC
Confidence 1 125778877775
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=89.72 E-value=0.78 Score=40.97 Aligned_cols=59 Identities=20% Similarity=0.253 Sum_probs=43.3
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC-C----------------------CC-ccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF-D----------------------SV-EDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~-~----------------------~~-~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
.++|||..|+.|..++....+. +..+ . .+ -++..+.+|||+.+ .+|++-..+++
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4799999999999888754322 1111 0 11 24667889999996 59999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.31 E-value=0.18 Score=42.34 Aligned_cols=47 Identities=21% Similarity=0.212 Sum_probs=33.3
Q ss_pred HHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhh
Q 024900 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRML 91 (261)
Q Consensus 44 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~ 91 (261)
..+...+.-.++.++|||.||.-+....+.+. ..+.-|++|++..+.
T Consensus 232 ~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM~Pl 278 (399)
T KOG3847|consen 232 EQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWMFPL 278 (399)
T ss_pred HHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeeeccc
Confidence 33444455567999999999998887776654 566677888876543
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=89.23 E-value=1.2 Score=39.78 Aligned_cols=78 Identities=17% Similarity=0.258 Sum_probs=48.7
Q ss_pred CCCeEEEec-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh---
Q 024900 5 KSHRVYSID-LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (261)
Q Consensus 5 ~~~~V~~~D-l~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~--- 73 (261)
+..+++.+| ..|.|-|...... ...+-++.++|+.+++... ...+++|.|.|+||.-+-.+|..
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~-----~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~ 190 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPI-----ERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISK 190 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCC-----CccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHh
Confidence 457899999 7788988532211 1112234456676666553 23479999999999855555542
Q ss_pred -C------cccccceEEeecc
Q 024900 74 -E------PEICRGMILLNIS 87 (261)
Q Consensus 74 -~------p~~v~~lv~~~~~ 87 (261)
. +=.++|+++.++.
T Consensus 191 ~~~~~~~~~inl~Gi~igng~ 211 (437)
T PLN02209 191 GNYICCNPPINLQGYVLGNPI 211 (437)
T ss_pred hcccccCCceeeeeEEecCcc
Confidence 1 1246788777753
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=89.19 E-value=1.2 Score=37.55 Aligned_cols=56 Identities=14% Similarity=0.010 Sum_probs=42.0
Q ss_pred CHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcc--cccceEEeecchhh
Q 024900 35 TFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNISLRM 90 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lv~~~~~~~~ 90 (261)
++.+.++.+++-+.... .+-+++||+|=||.++-.++.++|+ .|+.+|.++++..+
T Consensus 75 ~~~~Qv~~vce~l~~~~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 75 PLRQQASIACEKIKQMKELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred CHHHHHHHHHHHHhcchhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 55666665555443311 2359999999999999999999987 59999999986543
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.91 E-value=0.73 Score=41.17 Aligned_cols=61 Identities=21% Similarity=0.268 Sum_probs=45.8
Q ss_pred CCCEEEEecCCCCCCCchhhhhh-ccC------------CC------------CccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRAY-GNF------------DS------------VEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~~-~~~------------~~------------~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
..++||..|+.|..+|.-..+.. ..+ .+ +-.+..+.||||+.+.++|+.-..++.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 37999999999999887654431 110 00 013467889999999999999999999
Q ss_pred HHHHhc
Q 024900 240 SFVTRH 245 (261)
Q Consensus 240 ~fl~~~ 245 (261)
.|+...
T Consensus 443 ~fl~g~ 448 (454)
T KOG1282|consen 443 RFLNGQ 448 (454)
T ss_pred HHHcCC
Confidence 999753
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.85 E-value=12 Score=35.06 Aligned_cols=52 Identities=25% Similarity=0.336 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 34 YTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
.|+.++.+-...+++. +. +.+.++|-|-||+++...+.+.|+..+++|.-.+
T Consensus 506 NTf~DFIa~a~~Lv~~-g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VP 560 (682)
T COG1770 506 NTFTDFIAAARHLVKE-GYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVP 560 (682)
T ss_pred ccHHHHHHHHHHHHHc-CcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCC
Confidence 4777777655555543 32 4699999999999999999999999999986443
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=87.86 E-value=0.61 Score=37.98 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=27.0
Q ss_pred CeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 54 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
++.-||||||+.+-+.+...++..-++-++++-
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 567899999999999998887666677777763
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=87.28 E-value=2.9 Score=36.41 Aligned_cols=57 Identities=12% Similarity=0.236 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhh--Cc---ccccceEEeecchhhh
Q 024900 35 TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM--EP---EICRGMILLNISLRML 91 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~--~p---~~v~~lv~~~~~~~~~ 91 (261)
.+.+.++--..+++..|-++++|+|-|-||.+++.+... .+ -.=+++|+++++..+.
T Consensus 177 QL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 177 QLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 344555444555655677899999999999999988652 21 1246899999876654
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=86.84 E-value=2.3 Score=35.38 Aligned_cols=54 Identities=15% Similarity=-0.040 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcc-cccceEEeecchh
Q 024900 36 FETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNISLR 89 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lv~~~~~~~ 89 (261)
+.+.++.+++.+..-. .+-+++||+|=||.+.-.++.++|+ .|+-+|.++++..
T Consensus 61 v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred HHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 4555555555554422 2469999999999999999999865 5999999998654
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.44 E-value=1.1 Score=37.26 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=20.6
Q ss_pred CCCeEEEEcChhHHHHHHHHhhC
Q 024900 52 KDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
-.+++|-|||+||.+|..+...+
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 35799999999999999998876
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=86.44 E-value=1.1 Score=37.26 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=20.6
Q ss_pred CCCeEEEEcChhHHHHHHHHhhC
Q 024900 52 KDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
-.+++|-|||+||.+|..+...+
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 35799999999999999998876
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.55 E-value=2.9 Score=37.55 Aligned_cols=77 Identities=21% Similarity=0.149 Sum_probs=46.9
Q ss_pred CCeEEEec-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-------HHHhc--CCCeEEEEcChhHHHHHHHHhhCc
Q 024900 6 SHRVYSID-LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF-------CKDVV--KDQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 6 ~~~V~~~D-l~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~-------~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
.-.++.+| .-|.|.|.....+ ..-+.....+|+..+ ..++. ..+.+|+|-|+||.-+-.+|..-.
T Consensus 146 ~adLvFiDqPvGTGfS~a~~~e-----~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~ 220 (498)
T COG2939 146 FADLVFIDQPVGTGFSRALGDE-----KKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELL 220 (498)
T ss_pred CCceEEEecCcccCcccccccc-----cccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHH
Confidence 45689999 7799999742111 111233333333322 22232 358999999999998888877544
Q ss_pred c---cccceEEeecc
Q 024900 76 E---ICRGMILLNIS 87 (261)
Q Consensus 76 ~---~v~~lv~~~~~ 87 (261)
+ ...++|.+++.
T Consensus 221 ~~~~~~~~~~nlssv 235 (498)
T COG2939 221 EDNIALNGNVNLSSV 235 (498)
T ss_pred HhccccCCceEeeee
Confidence 4 36677766653
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=85.50 E-value=1.1 Score=35.59 Aligned_cols=42 Identities=17% Similarity=0.259 Sum_probs=33.5
Q ss_pred HHHHhcCCCeEEEEcChhHHHHHHHHhhCcc--cccceEEeecc
Q 024900 46 FCKDVVKDQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNIS 87 (261)
Q Consensus 46 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lv~~~~~ 87 (261)
++.....+.+.+|.||+||...+.+..++|+ +|-++.+.|++
T Consensus 183 ~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 183 IVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 3444456789999999999999999998875 57777777765
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=81.60 E-value=2.5 Score=33.17 Aligned_cols=64 Identities=16% Similarity=0.282 Sum_probs=43.6
Q ss_pred CCC-CCCEEEEecCCCCCCCchhh---hhhc-cCCCC-ccEEEcCCCCCCCCCCCh---hhHHHHHHHHHHhc
Q 024900 182 PQV-KCPVLIAWGDKDPWEPIELG---RAYG-NFDSV-EDFIVLPNVGHCPQDEAP---HLVNPLVESFVTRH 245 (261)
Q Consensus 182 ~~i-~~Pvlii~G~~D~~~~~~~~---~~~~-~~~~~-~~~~~i~~~gH~~~~e~p---~~~~~~l~~fl~~~ 245 (261)
+.| +++.|-|-|+.|.++.+--. ..+. .+++. .+-+..+++||+-.+.=+ +++...|++|+.++
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 455 46677799999999877532 3342 33322 244677899999776443 67889999998763
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.40 E-value=0.57 Score=40.72 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHH
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQA 70 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~ 70 (261)
+.++++.+.+....++++.+||||+||.++--+
T Consensus 135 Rla~~~~e~~~~~si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 135 RLAEEVKETLYDYSIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred ccHHHHhhhhhccccceeeeeeeecCCeeeeEE
Confidence 335555665555667899999999999876544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 261 | ||||
| 1j1i_A | 296 | Crystal Structure Of A His-Tagged Serine Hydrolase | 3e-10 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 3e-07 | ||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 3e-07 | ||
| 2xt0_A | 297 | Dehalogenase Dppa From Plesiocystis Pacifica Sir-I | 5e-06 | ||
| 1wom_A | 271 | Crystal Structure Of Rsbq Length = 271 | 3e-05 | ||
| 4f60_A | 299 | Crystal Structure Of Rhodococcus Rhodochrous Haloal | 9e-05 | ||
| 4f5z_A | 299 | Crystal Structure Of Rhodococcus Rhodochrous Haloal | 1e-04 | ||
| 3nwo_A | 330 | Crystal Structure Of Proline Iminopeptidase Mycobac | 3e-04 | ||
| 1bn6_A | 294 | Haloalkane Dehalogenase From A Rhodococcus Species | 3e-04 | ||
| 3fbw_A | 299 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 3e-04 | ||
| 1cqw_A | 295 | Nai Cocrystallised With Haloalkane Dehalogenase Fro | 4e-04 | ||
| 3w06_A | 272 | Crystal Structure Of Arabidopsis Thaliana Dwarf14 L | 4e-04 | ||
| 4ih1_A | 270 | Crystal Structure Of Karrikin Insensitive 2 (kai2) | 4e-04 | ||
| 4hrx_A | 288 | Crystal Structure Of Kai2 Length = 288 | 4e-04 | ||
| 3rk4_A | 299 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 4e-04 | ||
| 3g9x_A | 299 | Structure Of Haloalkane Dehalogenase Dhaa14 Mutant | 4e-04 | ||
| 4fwb_A | 292 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 5e-04 | ||
| 3fwh_A | 299 | Structure Of Haloalkane Dehalogenase Mutant Dha15 ( | 5e-04 | ||
| 4f0j_A | 315 | Crystal Structure Of A Probable Hydrolytic Enzyme ( | 6e-04 |
| >pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase Involved In The Carbazole Degradation (Carc Enzyme) Length = 296 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|2XT0|A Chain A, Dehalogenase Dppa From Plesiocystis Pacifica Sir-I Length = 297 | Back alignment and structure |
|
| >pdb|1WOM|A Chain A, Crystal Structure Of Rsbq Length = 271 | Back alignment and structure |
|
| >pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant (t148l, G171q, A172v, C176f) Length = 299 | Back alignment and structure |
|
| >pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant (l95v, A172v) Length = 299 | Back alignment and structure |
|
| >pdb|3NWO|A Chain A, Crystal Structure Of Proline Iminopeptidase Mycobacterium Smegmatis Length = 330 | Back alignment and structure |
|
| >pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species Length = 294 | Back alignment and structure |
|
| >pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Dhaa Mutant C176y Length = 299 | Back alignment and structure |
|
| >pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A Rhodococcus Species Length = 295 | Back alignment and structure |
|
| >pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like (atd14l) Length = 272 | Back alignment and structure |
|
| >pdb|4IH1|A Chain A, Crystal Structure Of Karrikin Insensitive 2 (kai2) From Arabidopsis Thaliana Length = 270 | Back alignment and structure |
|
| >pdb|4HRX|A Chain A, Crystal Structure Of Kai2 Length = 288 | Back alignment and structure |
|
| >pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant Dhaa31 Length = 299 | Back alignment and structure |
|
| >pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f From Rhodococcus Rhodochrous Length = 299 | Back alignment and structure |
|
| >pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 - Trichloropropane Length = 292 | Back alignment and structure |
|
| >pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15 (I135fC176Y) FROM Rhodococcus Rhodochrous Length = 299 | Back alignment and structure |
|
| >pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053) From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution Length = 315 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 5e-55
Identities = 48/261 (18%), Positives = 102/261 (39%), Gaps = 40/261 (15%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICN 60
+LA+ +RV ++D++G+G + KP+ YT + L+DF K + + + N
Sbjct: 61 ILARHYRVIAMDMLGFGKTAKPDIE-------YTQDRRIRHLHDFIKAMNFDGKVSIVGN 113
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKK--QPWYGRPLIRSFQNLLRNTAAGK 118
S+GG GL +V+ E+ ++L+ + ++ I + +P R
Sbjct: 114 SMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTR------------- 160
Query: 119 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI----CYSGG 174
E + +++ ND ++ + ++ + ++ + G
Sbjct: 161 ---------EGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGL 211
Query: 175 PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDEAPH 232
E + +V+ P L+ G D P+E + + DS ++P+ GH E P
Sbjct: 212 FYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDS--WGYIIPHCGHWAMIEHPE 269
Query: 233 LVNPLVESFVTRHATPPASVS 253
SF++ + +
Sbjct: 270 DFANATLSFLSLRVDITPAAA 290
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 6e-51
Identities = 51/258 (19%), Positives = 92/258 (35%), Gaps = 36/258 (13%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L+K +RV + D++G+G++D+P + Y+ ++W + + ++A + N+
Sbjct: 50 ALSKFYRVIAPDMVGFGFTDRPENYN------YSKDSWVDHIIGIMDALEIEKAHIVGNA 103
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG + + A+ E M+L+ R + T +
Sbjct: 104 FGGGLAIATALRYSERVDRMVLMG-----------AAGTRFDV---------TEGLNAVW 143
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI------CYSGGP 175
+ E++RN+L D S VT+EL + ++ G + F
Sbjct: 144 GYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALA 203
Query: 176 LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDEAPHL 233
+E + + LI G +D P+ G + V GH Q E
Sbjct: 204 SSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRA--QLHVFGRCGHWTQIEQTDR 261
Query: 234 VNPLVESFVTRHATPPAS 251
N LV F TP
Sbjct: 262 FNRLVVEFFNEANTPKLV 279
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 7e-40
Identities = 43/247 (17%), Positives = 78/247 (31%), Gaps = 28/247 (11%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLA+ V ++D GYG+SDK A L + + + N+
Sbjct: 61 VLARHFHVLAVDQPGYGHSDKRAEHG------QFNRYAAMALKGLFDQLGLGRVPLVGNA 114
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG ++ A+ P ++L+ L + +
Sbjct: 115 LGGGTAVRFALDYPARAGRLVLMGPG----------GLSINLFAPDPTEGVKRLSK---F 161
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI-----CYSGGPL 176
+ T E++ L D + +T ELV++ + +
Sbjct: 162 SVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGM 221
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDEAPHLV 234
+ +++ PVL+ WG +D P++ + V GH Q E
Sbjct: 222 MWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRA--QLHVFGQCGHWVQVEKFDEF 279
Query: 235 NPLVESF 241
N L F
Sbjct: 280 NKLTIEF 286
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 6e-39
Identities = 50/250 (20%), Positives = 85/250 (34%), Gaps = 32/250 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +RV +D G+G SD + A L + + + NS+
Sbjct: 63 VEAGYRVILLDCPGWGKSDSVVNSG------SRSDLNARILKSVVDQLDIAKIHLLGNSM 116
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG + + PE ++L+ + I+ L R
Sbjct: 117 GGHSSVAFTLKWPERVGKLVLMGGG--TGGMSLFTPMPTEGIKRLNQLYRQ--------- 165
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQ------PGLETGAADVFLEFICYSGGPL 176
T E+++ ++ DTS +T+ L E L LE + P
Sbjct: 166 --PTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEAN---PKQFPD 220
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDEAPHLV 234
L ++K LI WG D + P++ G + S + + + GH Q E
Sbjct: 221 FGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGS--ELHIFRDCGHWAQWEHADAF 278
Query: 235 NPLVESFVTR 244
N LV +F+ R
Sbjct: 279 NQLVLNFLAR 288
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-38
Identities = 52/259 (20%), Positives = 84/259 (32%), Gaps = 47/259 (18%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +RV D G+ SD + A + + D+A + N++
Sbjct: 60 VDAGYRVILKDSPGFNKSDAVVMDE------QRGLVNARAVKGLMDALDIDRAHLVGNAM 113
Query: 63 GGLVGLQAAVMEPEICRGMIL---------LNISLRMLHIKK-QPWYGRPLIRSFQNLLR 112
GG L A+ P+ +IL + + M IK Y P + + +L+
Sbjct: 114 GGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQ 173
Query: 113 NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVE---KILQPGLETGAADVFLEFI 169
Y D S +TEEL++ + +Q E +
Sbjct: 174 V-----FLY------------------DQSLITEELLQGRWEAIQRQPEHLKNFLISAQK 210
Query: 170 CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQ 227
L ++K I WG D + P++ G D+ V G Q
Sbjct: 211 APLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDA--RLHVFSKCGAWAQ 268
Query: 228 DEAPHLVNPLVESFVTRHA 246
E N LV F+ RHA
Sbjct: 269 WEHADEFNRLVIDFL-RHA 286
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 3e-38
Identities = 43/249 (17%), Positives = 83/249 (33%), Gaps = 30/249 (12%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
LA++ V + DLIG+G S+ P + Q+ +++ + NS
Sbjct: 54 DLAENFFVVAPDLIGFGQSEY--PETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNS 111
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG V LQ V PE + L+ ++ +P L+ + +
Sbjct: 112 MGGAVTLQLVVEAPERFDKVALMGSVGAPMNA--RPPELARLLAFYAD------------ 157
Query: 122 KMVATSESVRNILCQCYNDTSQV--TEELVEKILQPGLETGAADVFLEFI-----CYSGG 174
R ++ D EE+V+ + + +
Sbjct: 158 ---PRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESL 214
Query: 175 PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDEAPH 232
+P L ++ VL+ G +D P++ + + +VL GH Q E
Sbjct: 215 VIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHA--ELVVLDRCGHWAQLERWD 272
Query: 233 LVNPLVESF 241
+ P++
Sbjct: 273 AMGPMLMEH 281
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 3e-32
Identities = 46/243 (18%), Positives = 83/243 (34%), Gaps = 33/243 (13%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNS 61
+ +R Y++D+IG P + T +A+ L D D + +++ I S
Sbjct: 90 WSSKYRTYAVDIIGDKNKSIP------ENVSGTRTDYANWLLDVF-DNLGIEKSHMIGLS 142
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GGL + + PE + +L+ F + A G
Sbjct: 143 LGGLHTMNFLLRMPERVKSAAILS--------------PAETFLPFHHDFYKYALG---- 184
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ S V L ND + + V++ + + +E L
Sbjct: 185 --LTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEEL 242
Query: 182 PQVKCPVLIAWGDKDP-WEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDEAPHLVNPLV 238
+ P+L+ G+ + ++P +F D + V+ N GH E P VN V
Sbjct: 243 RSARVPILLLLGEHEVIYDPHSALHRASSFVPDI--EAEVIKNAGHVLSMEQPTYVNERV 300
Query: 239 ESF 241
F
Sbjct: 301 MRF 303
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 3e-32
Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 33/262 (12%)
Query: 2 VLAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICN 60
VLA + +RV ++D +G+ S KP Y+F+ A+ + + + +A I +
Sbjct: 68 VLADAGYRVIAVDQVGFCKSSKPAHYQ------YSFQQLAANTHALLERLGVARASVIGH 121
Query: 61 SIGGLVGLQAAVMEPEICRGMILLN-ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
S+GG++ + A++ P ++L+N I L PW R + ++ L+ +A G
Sbjct: 122 SMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPW--RSVDDWYRRDLQTSAEGIR 179
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEE 179
Y+ + + + G E+ A + L + P+ E
Sbjct: 180 QYQQATYYAGEWRP------EFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYE 233
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF----------------IVLPNVG 223
L +++ P L+ G+KD + + ++ + P++G
Sbjct: 234 L-DRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLG 292
Query: 224 HCPQDEAPHLVNPLVESFVTRH 245
H PQ +AP + + +
Sbjct: 293 HTPQIQAPERFHQALLEGLQTQ 314
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 5e-30
Identities = 31/243 (12%), Positives = 67/243 (27%), Gaps = 30/243 (12%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
++ +DL G G SD +P + + + + + + +S GG +
Sbjct: 50 YQRIYLDLPGMGNSDPISP-------STSDNVLETLIEAIEEIIGARRFILYGHSYGGYL 102
Query: 67 GLQAAVMEPEICRGMILLN-ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVA 125
A + G+ L + + + L + V
Sbjct: 103 AQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVI 162
Query: 126 TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI--CYSGGPLPEELLPQ 183
+ + ++ PGL+ F++ + YS +
Sbjct: 163 INNQAW---------------HDYQNLIIPGLQK-EDKTFIDQLQNNYSFTFEEKLKNIN 206
Query: 184 VKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
+ P I G D + N + + ++L GH + V + F
Sbjct: 207 YQFPFKIMVGRNDQVVGYQEQLKLINHNENG--EIVLLNRTGHNLMIDQREAVGFHFDLF 264
Query: 242 VTR 244
+
Sbjct: 265 LDE 267
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 4e-28
Identities = 53/241 (21%), Positives = 75/241 (31%), Gaps = 38/241 (15%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
K V + D GYG+S P RDF P FE A D K + + + S
Sbjct: 48 NKKLFTVVAWDPRGYGHSRPP-DRDF---PADFFERDAKDAVDLMKALKFKKVSLLGWSD 103
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG+ L AA P M++ + + + G + + R Y
Sbjct: 104 GGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYD 163
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
A + E+ V+ I Q LLP
Sbjct: 164 YFA-----------------RTCEKWVDGIRQFKHLPDGNIC-------------RHLLP 193
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVNPLVES 240
+V+CP LI G+KDP P V+ ++P H N L E
Sbjct: 194 RVQCPALIVHGEKDPLVPRFHADFI--HKHVKGSRLHLMPEGKHNLHLRFADEFNKLAED 251
Query: 241 F 241
F
Sbjct: 252 F 252
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 6e-28
Identities = 42/246 (17%), Positives = 75/246 (30%), Gaps = 19/246 (7%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+ VY ++L G G SD + Y+ L + + ++ F +S
Sbjct: 45 PFTDHYSVYLVNLKGCGNSDSAK-----NDSEYSMTETIKDLEAIREALYINKWGFAGHS 99
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG++ L A E +I+ + + + F ++ A
Sbjct: 100 AGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNA----L 155
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE--- 178
+T + R L + + S +EE +E+ L+ L + + +
Sbjct: 156 NDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNY--FRQVEYKDYDV 213
Query: 179 -ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDEAPHLVN 235
+ L VK P I G D P N ++ H P E N
Sbjct: 214 RQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNA--TLTKFEESNHNPFVEEIDKFN 271
Query: 236 PLVESF 241
V
Sbjct: 272 QFVNDT 277
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 2e-27
Identities = 41/245 (16%), Positives = 80/245 (32%), Gaps = 19/245 (7%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
++ V +IDL G+G + F+ + L+ S+
Sbjct: 39 FTDNYHVITIDLPGHGEDQSSMDET------WNFDYITTLLDRILDKYKDKSITLFGYSM 92
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG V L A+ +IL + S + + R L+ + + + A +LF
Sbjct: 93 GGRVALYYAINGHIPISNLILESTSPGIKE--EANQLERRLVDDARAKVLDIAGIELFVN 150
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP--EEL 180
+ ++ E+ +I Q L + Y G +P
Sbjct: 151 DWEKLPL--------FQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPR 202
Query: 181 LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240
L ++K P LI G+ D +++ + N ++ GH E + ++
Sbjct: 203 LKEIKVPTLILAGEYDEK-FVQIAKKMANLIPNSKCKLISATGHTIHVEDSDEFDTMILG 261
Query: 241 FVTRH 245
F+
Sbjct: 262 FLKEE 266
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 6e-27
Identities = 47/247 (19%), Positives = 86/247 (34%), Gaps = 23/247 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ HRV D +G G+SD + + T + +A + D C+ + + F+ +S+
Sbjct: 43 FEEDHRVILFDYVGSGHSDLR---AYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSV 99
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G L+G+ A++ PE+ ++++ S L+ +YG LL
Sbjct: 100 GALIGMLASIRRPELFSHLVMVGPSPCYLN-DPPEYYGGFEEEQLLGLLEMMEKN----- 153
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET--GAADVFLEFICYSGGPLPEEL 180
+ + + D ++ EEL + A E
Sbjct: 154 YIGWATVFAATVLN-QPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHR-------ED 205
Query: 181 LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVNPLV 238
L +V P LI D P +G+ + + GHCP P L+
Sbjct: 206 LSKVTVPSLILQCADDIIAPATVGKYM--HQHLPYSSLKQMEARGHCPHMSHPDETIQLI 263
Query: 239 ESFVTRH 245
++ H
Sbjct: 264 GDYLKAH 270
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 7e-27
Identities = 39/264 (14%), Positives = 81/264 (30%), Gaps = 31/264 (11%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICN 60
L R+ + DLIG G SDK +P Y++ L + + D + +
Sbjct: 50 HLEGLGRLVACDLIGMGASDKLSPSGPDR---YSYGEQRDFLFALWDALDLGDHVVLVLH 106
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK-- 118
G +G A + +G+ + + + P R + + F++ A +
Sbjct: 107 DWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALEHN 166
Query: 119 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGG---- 174
+F + V +R + + + + G + + + G
Sbjct: 167 IFVERVLPGAILRQL-------SDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEV 219
Query: 175 ----PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF----IVLPNVGHCP 226
L + P L + + R Y V + + H
Sbjct: 220 VALVNEYRSWLEETDMPKLFINAEPGAIITGRI-RDY-----VRSWPNQTEITVPGVHFV 273
Query: 227 QDEAPHLVNPLVESFVTRHATPPA 250
Q+++P + + FV R +
Sbjct: 274 QEDSPEEIGAAIAQFVRRLRSAAG 297
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-26
Identities = 48/257 (18%), Positives = 90/257 (35%), Gaps = 32/257 (12%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+A SHR + DLIG G SDKP+ D Y F+ L+ F + + ++ + +
Sbjct: 54 HVAPSHRCIAPDLIGMGKSDKPD----LD---YFFDDHVRYLDAFIEALGLEEVVLVIHD 106
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNL--LRNTAAGKL 119
G +G A PE +G+ + + P + R ++F+ R +
Sbjct: 107 WGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQN 166
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF---ICYSGG-- 174
+ A + V L TE ++ +P L+ + F + +G
Sbjct: 167 AFIEGALPKCVVRPL----------TEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPA 216
Query: 175 ------PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG-NFDSVEDFIVLPNVGHCPQ 227
L Q P L+ WG P + + + + + H Q
Sbjct: 217 NIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCK-TVDIGPGLHYLQ 275
Query: 228 DEAPHLVNPLVESFVTR 244
++ P L+ + ++
Sbjct: 276 EDNPDLIGSEIARWLPA 292
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 2e-26
Identities = 39/243 (16%), Positives = 82/243 (33%), Gaps = 22/243 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+ ++D G+G SDKP Y +A + + + + A + +S+
Sbjct: 91 LSDRFTTIAVDQRGHGLSDKP-ETG------YEANDYADDIAGLIRTLARGHAILVGHSL 143
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G + AA P++ R ++ ++ + P+ + + + + A +LF
Sbjct: 144 GARNSVTAAAKYPDLVRSVVAIDFT---------PYIETEALDALEARVN--AGSQLFED 192
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ A + D ++ E + + GL A+ +
Sbjct: 193 IKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYR 252
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVNPLVES 240
V PVLI G+ D +V+P H + +P + + +
Sbjct: 253 DVTKPVLIVRGESSKLVSAAALAKTS--RLRPDLPVVVVPGADHYVNEVSPEITLKAITN 310
Query: 241 FVT 243
F+
Sbjct: 311 FID 313
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 2e-26
Identities = 46/253 (18%), Positives = 80/253 (31%), Gaps = 38/253 (15%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+ ++ +DL G+G S + A + D+A ++ S+
Sbjct: 36 LSSHFTLHLVDLPGFGRSRGFGA--------LSLADMA----EAVLQQAPDKAIWLGWSL 83
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRP--LIRSFQNLLRNTAAG--- 117
GGLV Q A+ PE R ++ + S + W G ++ FQ L +
Sbjct: 84 GGLVASQIALTHPERVRALVTVASSPCFS--ARDEWPGIKPDVLAGFQQQLSDDQQRTVE 141
Query: 118 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET-GAADVFLEFICYSGGPL 176
+ +E+ R + T +L GLE D+
Sbjct: 142 RFLALQTMGTETARQDA-RALKKTVLALPMPEVDVLNGGLEILKTVDL------------ 188
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAY--GNFDSVEDFIVLPNVGHCPQDEAPHLV 234
+ L V P L +G D P ++ S + + H P P
Sbjct: 189 -RQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS--ESYIFAKAAHAPFISHPAEF 245
Query: 235 NPLVESFVTRHAT 247
L+ + R +
Sbjct: 246 CHLLVALKQRVGS 258
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 3e-26
Identities = 44/265 (16%), Positives = 84/265 (31%), Gaps = 33/265 (12%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICN 60
A R+ + DLIG G SDK +P Y + L+ + + + D+ + +
Sbjct: 51 HCAGLGRLIACDLIGMGDSDKLDPSGPER---YAYAEHRDYLDALWEALDLGDRVVLVVH 107
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK-- 118
G +G A E +G+ + + P R L ++F++ +
Sbjct: 108 DWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDN 167
Query: 119 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP- 177
+F + V +R + + E L G + I +G P
Sbjct: 168 VFVEQVLPGLILRPL-------SEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADV 220
Query: 178 -------EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF----IVLPNVGHCP 226
L + P L + + R + + + H
Sbjct: 221 VAIARDYAGWLSESPIPKLFINAEPGALTTGRM-RDF-----CRTWPNQTEITVAGAHFI 274
Query: 227 QDEAPHLVNPLVESFVTRHATPPAS 251
Q+++P + + +FV R PA
Sbjct: 275 QEDSPDEIGAAIAAFVRR--LRPAH 297
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 8e-26
Identities = 38/243 (15%), Positives = 73/243 (30%), Gaps = 19/243 (7%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L S + +ID GYS ++ W + + + +SI
Sbjct: 66 LPDSIGILTIDAPNSGYSPVS------NQANVGLRDWVNAILMIFEHFKFQSYLLCVHSI 119
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG LQ + C G I L + M++ P + + L+ A + K
Sbjct: 120 GGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLK 179
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
++ S Q + +L + P + A +F +
Sbjct: 180 DLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDF----------KTGI 229
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242
K P ++ E +E + + ++L H + + VE +
Sbjct: 230 SEKIPSIVFSESFREKEYLESEYLNKHTQTK---LILCGQHHYLHWSETNSILEKVEQLL 286
Query: 243 TRH 245
+ H
Sbjct: 287 SNH 289
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 7e-25
Identities = 33/253 (13%), Positives = 67/253 (26%), Gaps = 58/253 (22%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFI 58
+ + +DL G+G S P T + + +F + I
Sbjct: 38 YLEDYNCILLDLKGHGESKGQCP--------STVYGYIDNVANFITNSEVTKHQKNITLI 89
Query: 59 CNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQ-------PWYGRPLIRSFQNLL 111
S+GG + L A+ + R ++ L+ R + K + +
Sbjct: 90 GYSMGGAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGI 149
Query: 112 RNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICY 171
N + K F + + + N L C D+
Sbjct: 150 DNPLSEKYFETLEKDPDIMINDLIACKL----------------------IDLV------ 181
Query: 172 SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDE 229
+ L + PV + +E +S + + H
Sbjct: 182 -------DNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENS--ELKIFETGKHFLLVV 232
Query: 230 APHLVNPLVESFV 242
V +++F+
Sbjct: 233 NAKGVAEEIKNFI 245
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 7e-25
Identities = 41/252 (16%), Positives = 80/252 (31%), Gaps = 29/252 (11%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L K V D +G G SD F K + + E +A + + + I +S+
Sbjct: 51 LEKQFTVIVFDYVGSGQSDLE---SFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHSV 107
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG-KLFY 121
++ A+ + + ++ S + + G + L+ +
Sbjct: 108 SSIIAGIASTHVGDRISDITMICPSPCFM-NFPPDYVGGFERDDLEELINLMDKNYIGWA 166
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE--- 178
+A L + +S++ EL A
Sbjct: 167 NYLAP-------LVMGASHSSELIGELSGSFCTTDPI-VAKTFAKATF--------FSDY 210
Query: 179 -ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVN 235
LL + P LI KD E+G+ +++ + ++ GHC L+
Sbjct: 211 RSLLEDISTPALIFQSAKDSLASPEVGQYM--AENIPNSQLELIQAEGHCLHMTDAGLIT 268
Query: 236 PLVESFVTRHAT 247
PL+ F+ + T
Sbjct: 269 PLLIHFIQNNQT 280
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 1e-23
Identities = 34/247 (13%), Positives = 71/247 (28%), Gaps = 30/247 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L RV + G+G S P + ++ + + + + +S
Sbjct: 50 LDADFRVIVPNWRGHGLSPSEVPD-------FGYQEQVKDALEILDQLGVETFLPVSHSH 102
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG V ++ PE I+++ + P + + L LF
Sbjct: 103 GGWVLVELLEQAGPERAPRGIIMDWLMWAPK----PDFAKSLTLLKDPERWREGTHGLFD 158
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET--GAADVFLEFICYSGGPLPEE 179
+ + R V L+E++ G + + V + +G P+
Sbjct: 159 VWLDGHDEKR------------VRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMM 206
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVNPL 237
P+ + E ++ + + + L H P + P
Sbjct: 207 ANLTKTRPIRHIFSQPTEPEYEKINSDFA--EQHPWFSYAKLGGPTHFPAIDVPDRAAVH 264
Query: 238 VESFVTR 244
+ F T
Sbjct: 265 IREFATA 271
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 1e-23
Identities = 47/271 (17%), Positives = 92/271 (33%), Gaps = 38/271 (14%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
V+A +R + DLIG G S KP + Y + + ++ F + D + +
Sbjct: 52 VVAAGYRAVAPDLIGMGDSAKP-DIE------YRLQDHVAYMDGFIDALGLDDMVLVIHD 104
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISL----RMLHIKKQPWYGRPLIRSFQNLL---RNT 114
G ++G++ A + P+ + + + M + PL R + +
Sbjct: 105 WGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMV 164
Query: 115 AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF---ICY 171
G F + + V L +E + P + L++ +
Sbjct: 165 LDGNFFVETILPEMGVVRSL----------SEAEMAAYRAPFPTRQSRLPTLQWPREVPI 214
Query: 172 SGGPL--------PEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNV 222
G P E L P L+ + P + N ++E +
Sbjct: 215 GGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNLE-VRFVGAG 273
Query: 223 GHCPQDEAPHLVNPLVESFVTRHATPPASVS 253
H Q++ PHL+ + ++ R+ P AS+
Sbjct: 274 THFLQEDHPHLIGQGIADWLRRNK-PHASLE 303
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 2e-23
Identities = 43/244 (17%), Positives = 69/244 (28%), Gaps = 29/244 (11%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA V D G G S P Y E L D AF S
Sbjct: 46 LAPHFTVICYDRRGRGDSGDTPP--------YAVEREIEDLAAII-DAAGGAAFVFGMSS 96
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G + L AA I R + P + + + R A F
Sbjct: 97 GAGLSLLAAASGLPITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMT 156
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ ++ + + PG+E A + + +P
Sbjct: 157 EGV-------------GVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFA 203
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVNPLVES 240
+ P L+ G P + D++ + ++ L N H +A + P++
Sbjct: 204 SISIPTLVMDGGASPAWIRHTAQELA--DTIPNARYVTLENQTHTVAPDA---IAPVLVE 258
Query: 241 FVTR 244
F TR
Sbjct: 259 FFTR 262
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 5e-23
Identities = 38/271 (14%), Positives = 69/271 (25%), Gaps = 25/271 (9%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+++ + DLIG+G S KP Y F L+ F + A+ +
Sbjct: 51 LVSPVAHCIAPDLIGFGQSGKP-DIA------YRFFDHVRYLDAFIEQRGVTSAYLVAQD 103
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRML-------HIKKQPWYGRPLIRSFQNLLRNT 114
G + A P+ RG+ + M + R+ R
Sbjct: 104 WGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTP 163
Query: 115 AAGKLFYKMVATSESVRNILCQCYND--TSQVTEELVEKILQPGLETGAADVFLEFIC-- 170
G+ + + V +L + P E
Sbjct: 164 GEGEAMI--LEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAG 221
Query: 171 -----YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC 225
Y L P L+ G+ E + + I L H
Sbjct: 222 EPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGLHY 281
Query: 226 PQDEAPHLVNPLVESFVTRHATPPASVSAAS 256
Q++ + V ++ ++A
Sbjct: 282 LQEDHADAIGRSVAGWIAGIEAVRPQLAAHH 312
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 93.7 bits (233), Expect = 1e-22
Identities = 40/250 (16%), Positives = 74/250 (29%), Gaps = 25/250 (10%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
RV + D G+G SDKP + YTFE + L + + + G
Sbjct: 72 ESGARVIAPDFFGFGKSDKPVDEED-----YTFEFHRNFLLALIERLDLRNITLVVQDWG 126
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM 123
G +GL + +P + +I++N L +F + A G +K
Sbjct: 127 GFLGLTLPMADPSRFKRLIIMNAXL---------MTDPVTQPAFSAFVTQPADGFTAWKY 177
Query: 124 VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF----------ICYSG 173
+ S + +TE P +T +F
Sbjct: 178 DLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDIS 237
Query: 174 GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPH 232
+A G KD ++ + + + + + GH Q+
Sbjct: 238 TEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQ 297
Query: 233 LVNPLVESFV 242
+ ++ F
Sbjct: 298 VAREALKHFA 307
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 6e-22
Identities = 45/240 (18%), Positives = 78/240 (32%), Gaps = 17/240 (7%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
A RV + DL G+G SDKP YTF L F + ++ +C G
Sbjct: 71 AAGGRVVAPDLFGFGRSDKPTDDA-----VYTFGFHRRSLLAFLDALQLERVTLVCQDWG 125
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM 123
G++GL V P++ +I++N L + P G R F + GKL +
Sbjct: 126 GILGLTLPVDRPQLVDRLIVMNT---ALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRA 182
Query: 124 VAT-SESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ +++ + + P
Sbjct: 183 IPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGR-------QAMSFWST 235
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
Q P +A G +DP E+ + +++ GH Q+ + + +F
Sbjct: 236 QWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGHFVQEHGEPIARAALAAF 295
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 1e-21
Identities = 38/244 (15%), Positives = 76/244 (31%), Gaps = 28/244 (11%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L H + +D+ +G S + + A L D + D+A FI +S+
Sbjct: 39 LVNDHNIIQVDVRNHGLSPREPV--------MNYPAMAQDLVDTLDALQIDKATFIGHSM 90
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG + + P+ ++ ++I+ H+++ + ++ + +
Sbjct: 91 GGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMR 150
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
E V L + + D + P L + + E +P
Sbjct: 151 QHLNEEGVIQFLLKSFVDGEW-------RFNVPVLWDQYPHI-----------VGWEKIP 192
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
P L G P+ + F V+ GH E P V + +
Sbjct: 193 AWDHPALFIPGGNSPYVSEQYRDDLLAQFPQAR-AHVIAGAGHWVHAEKPDAVLRAIRRY 251
Query: 242 VTRH 245
+ H
Sbjct: 252 LNDH 255
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 6e-21
Identities = 44/252 (17%), Positives = 80/252 (31%), Gaps = 26/252 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNS 61
L + ++V D G G + D Y+ A++L+ + + ++
Sbjct: 38 LEQEYQVVCYDQRGTGNNPDTLAED------YSIAQMAAELHQAL-VAAGIEHYAVVGHA 90
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+G LVG+Q A+ P +I +N LR+ R FQ R +G
Sbjct: 91 LGALVGMQLALDYPASVTVLISVNGWLRI---------NAHTRRCFQVRERLLYSGG--- 138
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
A E+ L + + L + + L +
Sbjct: 139 -AQAWVEAQPLFLYP-ADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHA 196
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVNPLVE 239
+++CPV I D P ++ D +V+P GH P N L+
Sbjct: 197 DRIRCPVQIICASDDLLVPTACSSEL--HAALPDSQKMVMPYGGHACNVTDPETFNALLL 254
Query: 240 SFVTRHATPPAS 251
+ + +
Sbjct: 255 NGLASLLHHREA 266
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 3e-20
Identities = 40/244 (16%), Positives = 85/244 (34%), Gaps = 23/244 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA +R + D G G ++ +T +T + + + A + S+
Sbjct: 68 LAAGYRCITFDNRGIGATENAEG--------FTTQTMVADTAALIETLDIAPARVVGVSM 119
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G + + V+ PE+ +L+ R+ + + ++ + + + ++ +
Sbjct: 120 GAFIAQELMVVAPELVSSAVLMATRGRLD--RARQFFNKAEAELYDSGVQLPPTYDARAR 177
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ + N + ND V + + + P T L+
Sbjct: 178 L------LENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCA---PQTNRLPAYR 228
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVNPLVES 240
+ PVL+ D P LGR D++ + ++ +P+ GH E P VN +
Sbjct: 229 NIAAPVLVIGFADDVVTPPYLGREVA--DALPNGRYLQIPDAGHLGFFERPEAVNTAMLK 286
Query: 241 FVTR 244
F
Sbjct: 287 FFAS 290
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 1e-19
Identities = 35/246 (14%), Positives = 72/246 (29%), Gaps = 23/246 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +RV + D G+G S +P Y ++T+ S L+ + + + S+
Sbjct: 51 VEAGYRVITYDRRGFGKSSQPWEG-------YEYDTFTSDLHQLLEQLELQNVTLVGFSM 103
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG + + + ++ L+ + G + +
Sbjct: 104 GGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVIND---- 159
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET---GAADVFLEFICYSGGPLPE 178
+A + + T V+E G D F
Sbjct: 160 -RLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAF----SKTDFR 214
Query: 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVNP 236
+ L + P LI GD D P E + +++ + ++ H N
Sbjct: 215 KDLEKFNIPTLIIHGDSDATVPFEYSGKLTH-EAIPNSKVALIKGGPHGLNATHAKEFNE 273
Query: 237 LVESFV 242
+ F+
Sbjct: 274 ALLLFL 279
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 2e-19
Identities = 43/247 (17%), Positives = 79/247 (31%), Gaps = 25/247 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
A+ +RV + D G+G S +P +T+A L + + A S
Sbjct: 43 AAQGYRVIAHDRRGHGRSSQP------WSG-NDMDTYADDLAQLIEHLDLRDAVLFGFST 95
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL-F 120
GG + L++ ++ + G P + F + + + A +
Sbjct: 96 GGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLP-MEVFDGIRQASLADRSQL 154
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET---GAADVFLEFICYSGGPLP 177
YK +A ++ + +V+ G+ A D F
Sbjct: 155 YKDLA-----SGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAF----SETDF 205
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVN 235
E L ++ P L+ GD D PIE V+ + H D +N
Sbjct: 206 TEDLKKIDVPTLVVHGDADQVVPIEASGIASA-ALVKGSTLKIYSGAPHGLTDTHKDQLN 264
Query: 236 PLVESFV 242
+ +F+
Sbjct: 265 ADLLAFI 271
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 84.0 bits (207), Expect = 2e-19
Identities = 31/248 (12%), Positives = 75/248 (30%), Gaps = 31/248 (12%)
Query: 1 MVLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICN 60
+ ++ +D G P + + + + A + + + +
Sbjct: 62 QEIIQNFVRVHVDAPGMEEGAPVFPLGY---QYPSLDQLADMIPCILQYLNFSTIIGVGV 118
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
G + + A+ P+ G++L+NI + W
Sbjct: 119 GAGAYILSRYALNHPDTVEGLVLINIDPNA-----KGWMDW-----------------AA 156
Query: 121 YKMVATSESVRNILCQCY--NDTSQVTEELVEKILQPGLETGAADVFLEFI----CYSGG 174
+K+ + S+ +++ + EL++K + +
Sbjct: 157 HKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDL 216
Query: 175 PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234
+KCPV++ GD+ P E + + F+ + + G PQ P +
Sbjct: 217 NFERGGETTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKL 276
Query: 235 NPLVESFV 242
+ F+
Sbjct: 277 TEAFKYFL 284
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 84.1 bits (208), Expect = 4e-19
Identities = 48/251 (19%), Positives = 88/251 (35%), Gaps = 19/251 (7%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ---AFFICNSIG 63
R+ ++DL +G + NP D + ET A + + + + D I +S+G
Sbjct: 67 CRIVALDLRSHGETKVKNPED------LSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMG 120
Query: 64 GLVGLQAAVME-PEICRGMILLNIS--LRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
G + + A G+ ++++ M + + R ++F++ L N +
Sbjct: 121 GAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKS-LENAIEWSVK 179
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEEL 180
+ ES R + +T K P ++ L
Sbjct: 180 SGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLF 239
Query: 181 LPQVKCPVLIAWGDKDPWE-PIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239
L P L+ D + + +G+ G F VLP GH ++AP V V
Sbjct: 240 L-SCPIPKLLLLAGVDRLDKDLTIGQMQGKF----QMQVLPQCGHAVHEDAPDKVAEAVA 294
Query: 240 SFVTRHATPPA 250
+F+ RH
Sbjct: 295 TFLIRHRFAEP 305
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 84.8 bits (209), Expect = 4e-19
Identities = 38/278 (13%), Positives = 72/278 (25%), Gaps = 26/278 (9%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICN------ 60
+V ID + +G S N + + A + +
Sbjct: 87 DKVLLIDQVNHGDSAVRNRGRL--GTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGH 144
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
S+GG L V++P + +IL+ + G P +
Sbjct: 145 SMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKT 204
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL------ETGAADVFL------EF 168
A + + + ++++ I+ + V
Sbjct: 205 CDHFANESEYVKYMRN-GSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNL 263
Query: 169 ICYSGG----PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGH 224
+CY P + V+ + G + W P + V+P H
Sbjct: 264 LCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSH 323
Query: 225 CPQDEAPHLVNPLVESFVTRH-ATPPASVSAASLYSSN 261
EAP LV + + T P S +
Sbjct: 324 LVNVEAPDLVIERINHHIHEFVLTSPLQSSHIPQLTLE 361
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 7e-19
Identities = 40/250 (16%), Positives = 81/250 (32%), Gaps = 29/250 (11%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
++ +R + D G+G SD+P ++T+A + + + + + S+
Sbjct: 43 SSRGYRTIAFDRRGFGRSDQPWTG-------NDYDTFADDIAQLIEHLDLKEVTLVGFSM 95
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG + A G++LL + K G P + F +
Sbjct: 96 GGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVP-LDVFARFKTELLKDR--- 151
Query: 122 KMVATSESVRNILCQCY--NDTSQVTEELVEKILQPGLET---GAADVFLEFICYSGGPL 176
++ + + Y N V++ + + LQ L D F
Sbjct: 152 -----AQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAF----AETD 202
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLV 234
+ ++ P L+ GD D P E + ++ V + H +
Sbjct: 203 FRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAA-ELIKGAELKVYKDAPHGFAVTHAQQL 261
Query: 235 NPLVESFVTR 244
N + +F+ R
Sbjct: 262 NEDLLAFLKR 271
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 7e-19
Identities = 43/255 (16%), Positives = 87/255 (34%), Gaps = 35/255 (13%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ +RV + D G+G S K N Y ++T+A+ L+ + + + S+
Sbjct: 47 LAQGYRVITYDRRGFGGSSKVNTG-------YDYDTFAADLHTVLETLDLRDVVLVGFSM 99
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL-F 120
G + A E + L L + G P F + + +
Sbjct: 100 GTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVP-QEVFDGIEAAAKGDRFAW 158
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG------AADVFLEFICYSGG 174
+ +N N S+++E+ V + + ++E
Sbjct: 159 FTDFY-----KNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIE------- 206
Query: 175 PLPEEL--LPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVED--FIVLPNVGHCPQDE 229
++ + P LI G KD PI+ R + +V + ++ + H
Sbjct: 207 DFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFH--QAVPEADYVEVEGAPHGLLWT 264
Query: 230 APHLVNPLVESFVTR 244
VN +++F+ +
Sbjct: 265 HADEVNAALKTFLAK 279
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 1e-18
Identities = 36/256 (14%), Positives = 77/256 (30%), Gaps = 31/256 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNS 61
+ R DLIG G S K Y L + + + + + F+ +
Sbjct: 66 IEPVARCIIPDLIGMGKSGKSGNGS------YRLLDHYKYLTAWFELLNLPKKIIFVGHD 119
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
G + A + + ++ + + ++ + I ++ + +
Sbjct: 120 WGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKMVLENNF 179
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV-FLEF-----ICYSGGP 175
+ S ++ E L+P E G L + + G P
Sbjct: 180 FVETVLPS---------KIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKP 230
Query: 176 LPEELLP------QVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGHCPQD 228
+++ + + + + DP F + E V H Q+
Sbjct: 231 DVVQIVRNYNAYLRASDDLPKLFIESDPGFFSNAIVEGAKKFPNTE--FVKVKGLHFLQE 288
Query: 229 EAPHLVNPLVESFVTR 244
+AP + ++SFV R
Sbjct: 289 DAPDEMGKYIKSFVER 304
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-18
Identities = 39/250 (15%), Positives = 89/250 (35%), Gaps = 30/250 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
A+ +RV + DL G+G S Y+ T+ +Q++ +++ + +S+
Sbjct: 50 AAQGYRVVAPDLFGHGRSSHLEMVTS-----YSSLTFLAQIDRVIQELPDQPLLLVGHSM 104
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G ++ A + P+ + +IL+ + L + + + + L +T +F
Sbjct: 105 GAMLATAIASVRPKKIKELILVELPLPAEE--SKKESAVNQLTTCLDYLSSTPQHPIFPD 162
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF-------------I 169
+ + +R + ++EE + Q + V +
Sbjct: 163 VATAASRLRQAI-------PSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNN 215
Query: 170 CYSGGPLPEELLPQVKCPVLIAWGDKDP-WEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228
G E+L ++ P + +GD P +L + + V + GH
Sbjct: 216 LPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQAK--RVFLSGGHNLHI 273
Query: 229 EAPHLVNPLV 238
+A + L+
Sbjct: 274 DAAAALASLI 283
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 4e-18
Identities = 52/258 (20%), Positives = 91/258 (35%), Gaps = 20/258 (7%)
Query: 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGL 65
V D +G G S F+T + + + + C + ++ + S GG+
Sbjct: 82 GRTVIHYDQVGCGNSTHLPDAP---ADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGM 138
Query: 66 VGLQAAVMEPEICRGMILLNISLRM-LHIKKQPWYGRPLIRSFQNLLRNTAAGKLF---Y 121
+G + AV +P + + N M L + L + L A
Sbjct: 139 LGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAALDRHEAAGTITHPD 198
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE--- 178
+ A +E R +C+ + + + +P + + EF G L +
Sbjct: 199 YLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVY-HTMNGPNEFHV--VGTLGDWSV 255
Query: 179 -ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVN 235
+ LP V PVL+ G+ D P + + + D + D V P HC E P
Sbjct: 256 IDRLPDVTAPVLVIAGEHDEATP-KTWQPF--VDHIPDVRSHVFPGTSHCTHLEKPEEFR 312
Query: 236 PLVESFVTRH-ATPPASV 252
+V F+ +H A V
Sbjct: 313 AVVAQFLHQHDLAADARV 330
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 82.2 bits (203), Expect = 4e-18
Identities = 45/262 (17%), Positives = 80/262 (30%), Gaps = 27/262 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L +RV + D G+G S +P Y ++T+A+ LN + + A + S+
Sbjct: 48 LDAGYRVITYDRRGFGQSSQP-TTG------YDYDTFAADLNTVLETLDLQDAVLVGFSM 100
Query: 63 GG-LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA-GKLF 120
G V + + L L G F ++ A F
Sbjct: 101 GTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAF 160
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG---AADVFLEFICYSGGPLP 177
Y + N ++++EE V G AA +
Sbjct: 161 YTGFFNDFYNLD-----ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-----YTDF 210
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLV 234
+P++ P LI G D PIE R + ++ ++ + H V
Sbjct: 211 RADIPRIDVPALILHGTGDRTLPIENTARVFH--KALPSAEYVEVEGAPHGLLWTHAEEV 268
Query: 235 NPLVESFVTRHATPPASVSAAS 256
N + +F+ +
Sbjct: 269 NTALLAFLAKALEAQKQKLLTE 290
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 4e-18
Identities = 45/248 (18%), Positives = 79/248 (31%), Gaps = 23/248 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L +RV + D G+G S +P Y ++T+A+ LN + + A + S
Sbjct: 47 LDAGYRVITYDRRGFGQSSQP-TTG------YDYDTFAADLNTVLETLDLQDAVLVGFST 99
Query: 63 GG-LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL-F 120
G V + + L L G F ++ A + F
Sbjct: 100 GTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAF 159
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG---AADVFLEFICYSGGPLP 177
Y + N ++++EE V G AA +
Sbjct: 160 YTGFFNDFYNLD-----ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-----YTDF 209
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236
+P++ P LI G D PIE R + +++ + H VN
Sbjct: 210 RADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNT 269
Query: 237 LVESFVTR 244
+ +F+ +
Sbjct: 270 ALLAFLAK 277
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 81.9 bits (202), Expect = 6e-18
Identities = 54/285 (18%), Positives = 101/285 (35%), Gaps = 49/285 (17%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+RV ++D+ GYG S P + Y E ++ F + QA FI + G
Sbjct: 283 QAGYRVLAMDMKGYGESSAPPEIEE-----YCMEVLCKEMVTFLDKLGLSQAVFIGHDWG 337
Query: 64 GLVGLQAAVMEPEICRGMILLNI----------SLRMLHIKKQPWY-------GRP---- 102
G++ A+ PE R + LN L + Y G
Sbjct: 338 GMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAEL 397
Query: 103 ---LIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEE----LVEKILQP 155
L R+F++L R + L V + + + + + VTEE V++ +
Sbjct: 398 EQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS 457
Query: 156 GLETG-----AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF 210
G + ++ + L ++ P L+ +KD ++ + ++
Sbjct: 458 GFRGPLNWYRNMERNWKW-------ACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDW 510
Query: 211 DSVEDF--IVLPNVGHCPQDEAPHLVNPLVESFVTRHATPPASVS 253
+ + + GH Q + P VN ++ ++ A P VS
Sbjct: 511 --IPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDARNPPVVS 553
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-17
Identities = 51/251 (20%), Positives = 89/251 (35%), Gaps = 33/251 (13%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+ +RV + D G+G SD+P + +T+A+ + + + A I +S
Sbjct: 45 LSHGYRVIAHDRRGHGRSDQP-STG------HDMDTYAADVAALTEALDLRGAVHIGHST 97
Query: 63 GG-LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA-GKLF 120
GG V A EP +L++ ++ G P + F AA F
Sbjct: 98 GGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLP-LEVFDEFRAALAANRAQF 156
Query: 121 YKMVATSESVRNILCQCYN-DTSQVTEELVEKILQPGLETGA---ADVFLEFICYSGGPL 176
Y V + +N + + V++ L++ G+ A + F
Sbjct: 157 YIDVPSGPFYG------FNREGATVSQGLIDHWWLQGMMGAANAHYECIAAF----SETD 206
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE-----DFIVLPNVGHCPQDEAP 231
+ L ++ PVL+A G D P S E + H P
Sbjct: 207 FTDDLKRIDVPVLVAHGTDDQVVPYADAAPK----SAELLANATLKSYEGLPHGMLSTHP 262
Query: 232 HLVNPLVESFV 242
++NP + +FV
Sbjct: 263 EVLNPDLLAFV 273
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 1e-16
Identities = 47/252 (18%), Positives = 79/252 (31%), Gaps = 30/252 (11%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +R + D G+G+S Y F+T+A LND D+ + +S+
Sbjct: 43 VDAGYRGIAHDRRGHGHSTPVWDG-------YDFDTFADDLNDLLTDLDLRDVTLVAHSM 95
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL-F 120
GG + R +LL+ ++ + G P F L + F
Sbjct: 96 GGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVP-DEVFDALKNGVLTERSQF 154
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET---GAADVFLEFICYSGGPLP 177
+K A N ++VT+ + + G F G
Sbjct: 155 WKDTAEGFFSAN------RPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAF----GYTDF 204
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVED--FIVLPNVGHCPQ--DEAPH 232
E L + P L+ GD D PI+ GR + + V H
Sbjct: 205 TEDLKKFDIPTLVVHGDDDQVVPIDATGRKSA--QIIPNAELKVYEGSSHGIAMVPGDKE 262
Query: 233 LVNPLVESFVTR 244
N + F+ +
Sbjct: 263 KFNRDLLEFLNK 274
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 2e-16
Identities = 30/254 (11%), Positives = 64/254 (25%), Gaps = 25/254 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ RV D G G S P+D +T + + + ++ + +
Sbjct: 49 YLEGFRVVYFDQRGSGRSL-ELPQDPRL---FTVDALVEDTLLLAEALGVERFGLLAHGF 104
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLR-----MLHIKKQPWYGRPLIRSFQNLLRNTAAG 117
G +V L+ P+ ++L L + + L+
Sbjct: 105 GAVVALEVLRRFPQAEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKREEPK 164
Query: 118 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP 177
LF +++ + R + + +
Sbjct: 165 ALFDRLMFPTPRGRMAYEWLAEGAGILGSD-------APGLAFLRNGLWRLDYT------ 211
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237
L + P+ + G++D + VLP GH +AP
Sbjct: 212 -PYLTPERRPLYVLVGERDGTSYPYAEEVASRLRA--PIRVLPEAGHYLWIDAPEAFEEA 268
Query: 238 VESFVTRHATPPAS 251
+ +
Sbjct: 269 FKEALAALVPALRG 282
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 2e-16
Identities = 41/247 (16%), Positives = 77/247 (31%), Gaps = 25/247 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA +RV + D G+G S + + + +A + + A + +S
Sbjct: 46 LAHGYRVVAHDRRGHGRSSQVWDG-------HDMDHYADDVAAVVAHLGIQGAVHVGHST 98
Query: 63 GGLVGLQAAVMEPEI-CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA-GKLF 120
GG ++ PE +L+ ++ G P F A+ F
Sbjct: 99 GGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLP-KSVFDGFQAQVASNRAQF 157
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET---GAADVFLEFICYSGGPLP 177
Y+ V + +E ++ + G+ D + F S
Sbjct: 158 YRDVPAGPFYGYN-----RPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAF---SQTDF- 208
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVN 235
E L ++ PVL+ GD D P E + + H ++N
Sbjct: 209 TEDLKGIQQPVLVMHGDDDQIVPYENSGVLSA-KLLPNGALKTYKGYPHGMPTTHADVIN 267
Query: 236 PLVESFV 242
+ +F+
Sbjct: 268 ADLLAFI 274
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 3e-16
Identities = 36/274 (13%), Positives = 67/274 (24%), Gaps = 53/274 (19%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
V D G S + Y F + D V D+A
Sbjct: 48 ADGGLHVIRYDHRDTGRSTTRDF----AAHPYGFG-------ELAADAVAVLDGWGVDRA 96
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA 115
+ S+G + A+ + + +L + R +
Sbjct: 97 HVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDF--DANIERVMRGEPTLDGLPGP 154
Query: 116 AGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ------PGLETGAADVFLEFI 169
+ ++ + + V K P + A I
Sbjct: 155 QQPFLDALALMNQPAE--------GRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAI 206
Query: 170 CYSGGPLPE---------------ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE 214
++GG L E L +V P L+ + DP P G+ +
Sbjct: 207 DHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLA--GLIP 264
Query: 215 D--FIVLPNVGHCPQDEAPHLVNPLVESFVTRHA 246
+P +GH + ++ + A
Sbjct: 265 TARLAEIPGMGHALPSSVHGPLAEVILAHTRSAA 298
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 8e-16
Identities = 49/241 (20%), Positives = 74/241 (30%), Gaps = 29/241 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L + RV D G+G S P YT + + + +A F+ S+
Sbjct: 50 LTRHFRVLRYDARGHGASSVPPGP-------YTLARLGEDVLELLDALEVRRAHFLGLSL 102
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG+VG A+ P+ ++L N S + W R + TAAG L
Sbjct: 103 GGIVGQWLALHAPQRIERLVLANTSAWLGP--AAQWDERIAAVLQAEDMSETAAGFL-GN 159
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ R E +VE+ + T L
Sbjct: 160 WFPPALLERA-------------EPVVERFRAMLMAT-NRHGLAGSFAAVRDTDLRAQLA 205
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVNPLVES 240
+++ P L+ G D G S+ + LP H E P V S
Sbjct: 206 RIERPTLVIAGAYDTVTAASHGELIA--ASIAGARLVTLPA-VHLSNVEFPQAFEGAVLS 262
Query: 241 F 241
F
Sbjct: 263 F 263
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 1e-15
Identities = 33/249 (13%), Positives = 61/249 (24%), Gaps = 37/249 (14%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ V D G+ D + +T A L F + S
Sbjct: 44 LARDFHVICPDWRGHDAKQTD-SGD------FDSQTLAQDLLAFIDAKGIRDFQMVSTSH 96
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISL----RMLHIKKQPWYGRPLIRSFQNLLRNTAAG 117
G V + + I+++ L + + + Q+ A
Sbjct: 97 GCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQSFFDEWAET 156
Query: 118 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICY--SGGP 175
++ ++ Q A+ Y G P
Sbjct: 157 TDNADVLNHLR--------------NEMPWFHGEMWQRACREIEAN-------YRTWGSP 195
Query: 176 LPEELLPQVKCPVLIAWGDKDPWEPI-ELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234
L + P + + + +L + S +P H P E P V
Sbjct: 196 LDRMDSLP-QKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPSLENPVAV 254
Query: 235 NPLVESFVT 243
+ F+
Sbjct: 255 AQAIREFLQ 263
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 3e-15
Identities = 41/256 (16%), Positives = 76/256 (29%), Gaps = 37/256 (14%)
Query: 3 LAKSHRVYSIDLIGYGYSDKP-NPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
LA RV ++ G G SD +P Y + L ++ I S
Sbjct: 52 LAGDWRVLCPEMRGRGDSDYAKDPMT------YQPMQYLQDLEALLAQEGIERFVAIGTS 105
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GGL+ + A P +L ++ + G IR + RN
Sbjct: 106 LGGLLTMLLAAANPARIAAAVLNDVGPEV------SPEGLERIRGYVGQGRNFETW---- 155
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL---------EFICYS 172
+ R + + + + + G++ F
Sbjct: 156 -----MHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPV 210
Query: 173 GGPLPEELLPQ----VKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228
G ++ P P+L+ G+ + + VE + LP +GH P
Sbjct: 211 GATPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMASRPGVE-LVTLPRIGHAPTL 269
Query: 229 EAPHLVNPLVESFVTR 244
+ P + + + R
Sbjct: 270 DEPESIA-AIGRLLER 284
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 6e-15
Identities = 37/271 (13%), Positives = 79/271 (29%), Gaps = 62/271 (22%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
LA+ + V DL G+G S+KP+ D Y+ + A D ++A
Sbjct: 52 LAEHYDVIVPDLRGFGDSEKPDLNDLSK---YSLDKAA-------DDQAALLDALGIEKA 101
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA 115
+ + + +V + + + + P+
Sbjct: 102 YVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDF---------GPVYFGLG------H 146
Query: 116 AGKLFY-----------KMVATSESVRNILCQCYND--------TSQVTEELVEKILQPG 156
+ +Y + ++ E + ++ T + E V+ ++P
Sbjct: 147 VHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPD 206
Query: 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPW----EPIELGRAYGNFDS 212
G + + I + PV + WG D IE Y
Sbjct: 207 NIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKY----- 261
Query: 213 VEDF--IVLPNVGHCPQDEAPHLVNPLVESF 241
++ + + GH E P + +++
Sbjct: 262 YSNYTMETIEDCGHFLMVEKPEIAIDRIKTA 292
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 8e-15
Identities = 46/269 (17%), Positives = 83/269 (30%), Gaps = 45/269 (16%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
LAK V + DL G G S+ P Y+ E A + K D+
Sbjct: 53 LAKRFTVIAPDLPGLGQSEPP-KTG------YSGEQVA-------VYLHKLARQFSPDRP 98
Query: 56 FFIC-NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT 114
F + + IG V ++ + + I + P + +
Sbjct: 99 FDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFA 158
Query: 115 AAGKLFYKMVATSES--VRNILCQCYNDTSQVTEELVEK----ILQPGLETG------AA 162
A +L ++A E + + + ++T +E L++ +P A
Sbjct: 159 ADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRAL 218
Query: 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF--IVLP 220
+ + E +++ P + G + ED VLP
Sbjct: 219 NESVR-------QNAELAKTRLQMPTMTLAGGGAGGMGTFQLEQMKAY--AEDVEGHVLP 269
Query: 221 NVGHCPQDEAPHLVNPLVESFVTRHATPP 249
GH +E +N LV F++R
Sbjct: 270 GCGHWLPEECAAPMNRLVIDFLSRGRHHH 298
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 8e-15
Identities = 26/251 (10%), Positives = 78/251 (31%), Gaps = 28/251 (11%)
Query: 2 VLAK--SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFIC 59
+ ++DL G+G+S + Y+ + + L +++ F +
Sbjct: 99 TVIVGLGEPALAVDLPGHGHSAWREDGN------YSPQLNSETLAPVLRELAPGAEFVVG 152
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
S+GGL ++ A M P++ ++L++++ P + A
Sbjct: 153 MSLGGLTAIRLAAMAPDLVGELVLVDVT---------PSALQRHAELTAEQRGTVALMHG 203
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVF-----LEFICYSGG 174
+ + +++ ++ + + + + +
Sbjct: 204 EREF-PSFQAMLDLTIA---AAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFA 259
Query: 175 PLPEELLPQVKCPVLIAWGDKDPW-EPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233
L ++ + + P+ + G + + + ++ GH Q + P
Sbjct: 260 GLWDD-VDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRA 318
Query: 234 VNPLVESFVTR 244
+ +V +
Sbjct: 319 LIEIVRGVLDT 329
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 8e-14
Identities = 50/283 (17%), Positives = 88/283 (31%), Gaps = 65/283 (22%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---------KDQAFF 57
+R + DL GYG + D ++ DVV +++ F
Sbjct: 59 YRAVAPDLRGYGDTTGAPLNDPSK---FSILH-------LVGDVVALLEAIAPNEEKVFV 108
Query: 58 ICNSIGGLVGLQAAVMEPEICRGMILLNI-------SLRMLHIKKQPWYGRPLIRSFQN- 109
+ + G L+ + P+ + ++ L++ + ++ K + I FQ
Sbjct: 109 VAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVP 168
Query: 110 ------LLRNTAAG--KLFY-------KMVATSESVRNILCQCYNDTSQVTEE----LVE 150
A K + + I +S ++EE
Sbjct: 169 GEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYAN 228
Query: 151 KILQPGLETGAADVFLEFICYSGGPLPEELL-----PQVKCPVLIAWGDKDPWEPIELGR 205
K Q G TGA + + Y P+ EL QVK P G+ D I +
Sbjct: 229 KFEQTGF-TGA----VNY--YRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAK 281
Query: 206 AYGNFDSVEDFI-------VLPNVGHCPQDEAPHLVNPLVESF 241
Y + + + VL H E PH ++ + F
Sbjct: 282 EYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIYDF 324
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 2e-13
Identities = 41/256 (16%), Positives = 88/256 (34%), Gaps = 28/256 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFIC-NS 61
+ V D G G S++P D+ +T + + + ++ F+ +S
Sbjct: 52 TKEGITVLFYDQFGCGRSEEP------DQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSS 105
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISL-RMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
GG + L AV + +G+I+ L +K+ L +++ ++ K
Sbjct: 106 YGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIK-----KYG 160
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYS----GGPL 176
+ + + Y+ +E+ ++L+ +V+ + G +
Sbjct: 161 SSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTI 220
Query: 177 PEEL----LPQVKCPVLIAWGDKD---PWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDE 229
+ + +K P LI G+ D P + S + V + H E
Sbjct: 221 KDWDITDKISAIKIPTLITVGEYDEVTPNVARVIHEKIAG--S--ELHVFRDCSHLTMWE 276
Query: 230 APHLVNPLVESFVTRH 245
N L+ F+ +H
Sbjct: 277 DREGYNKLLSDFILKH 292
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 9e-13
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 6/129 (4%)
Query: 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+K + VY+ D G+G S + A + D+ K ++ + S
Sbjct: 52 YSKIGYNVYAPDYPGFGRSASSEKYGI---DRGDLKHAAEFIRDYLKANGVARSVIMGAS 108
Query: 62 IGGLVGLQAAVMEPEICRGMILLN--ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
+GG + + + P+I G+I + + K+ L+ ++ + A K
Sbjct: 109 MGGGMVIMTTLQYPDIVDGIIAVAPAWVESLKGDMKKIRQKTLLVWGSKDHVVPIALSKE 168
Query: 120 FYKMVATSE 128
+ +++ S
Sbjct: 169 YASIISGSR 177
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 9e-05
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 181 LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240
+ +++ L+ WG KD PI L + Y + S ++ GH E P +
Sbjct: 143 MKKIRQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITVD 202
Query: 241 F 241
F
Sbjct: 203 F 203
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-12
Identities = 43/284 (15%), Positives = 80/284 (28%), Gaps = 68/284 (23%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
LA+ +V DL GYG+SD P + YT A K +++
Sbjct: 56 LAERFKVIVADLPGYGWSDMPESDE--QHTPYTKRAMA-------KQLIEAMEQLGHVHF 106
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA 115
++ G V + A+ P + +L+I P +Q + R A
Sbjct: 107 ALAGHNRGARVSYRLALDSPGRLSKLAVLDIL--------------PTYEYWQRMNRAYA 152
Query: 116 AGKLFY-----------KMVATSESVRNILCQCYNDTS----------QVTEELVEKILQ 154
+ ++ + + + E
Sbjct: 153 LKIYHWSFLAQPAPLPENLLGGDP--DFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFAD 210
Query: 155 PGLETGAADVF--LEFICYSGGPLPEELLPQVKCPVLIAWGDKD----PWEPIELGRAYG 208
P + + + + + E ++ P+L WG P+++ R +
Sbjct: 211 PMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKW- 269
Query: 209 NFDSVEDF-IVLPNVGHCPQDEAPHLVNPLVESFVTRHATPPAS 251
D GH +EAP + F + P S
Sbjct: 270 ----ASDVQGAPIESGHFLPEEAPDQTAEALVRFFSAA---PGS 306
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 3e-12
Identities = 44/284 (15%), Positives = 81/284 (28%), Gaps = 66/284 (23%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
LA + V DL GYG S K P D Y+F A D + ++
Sbjct: 48 LANEYTVVCADLRGYGGSSK--PVGAPDHANYSFRAMA-------SDQRELMRTLGFERF 98
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISL------RMLHIKKQPWYGRPLIRSFQN 109
+ ++ GG G + A+ P+ + +L+I + + ++ Q
Sbjct: 99 HLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYW--HWYFLQQP 156
Query: 110 -------LLRNTAA--GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160
+ + + AT + EE ++ P G
Sbjct: 157 APYPEKVIGADPDTFYEGCLFGWGATGADG---------FDPEQLEEYRKQWRDPAAIHG 207
Query: 161 -------AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDP----WEPIELGRAYGN 209
+ E +L QV+CP L+ G +E +
Sbjct: 208 SCCDYRAGGTIDFE-------LDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPR-- 258
Query: 210 FDSVEDF-IVLPNVGHCPQDEAPHLVNPLVESFVTRHATPPASV 252
+ + GH D P ++ F++ +
Sbjct: 259 ---LANMRFASLPGGHFFVDRFPDDTARILREFLSDARSGIHQT 299
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 4e-12
Identities = 14/98 (14%), Positives = 24/98 (24%), Gaps = 5/98 (5%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+ +R +IDL G G+S + S L + I S
Sbjct: 57 LAQAGYRAVAIDLPGLGHSKEAA-----APAPIGELAPGSFLAAVVDALELGPPVVISPS 111
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWY 99
+ G+ L G + +
Sbjct: 112 LSGMYSLPFLTAPGSQLPGFVPVAPICTDKINAANYAS 149
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 8e-05
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
VK P LI +GD+DP + +++ GH + P + + F
Sbjct: 148 ASVKTPALIVYGDQDPMGQTSFEHLKQLPNH--RVLIMKGAGHPCYLDKPEEWHTGLLDF 205
Query: 242 VT 243
+
Sbjct: 206 LQ 207
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 2e-11
Identities = 48/265 (18%), Positives = 84/265 (31%), Gaps = 47/265 (17%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
LA + V + DL GYG S + P Y+ A +D V+ +Q
Sbjct: 48 LANNFTVVATDLRGYGDSSR--PASVPHHINYSKRVMA-------QDQVEVMSKLGYEQF 98
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRS----FQN-- 109
+ + + G V + A+ P + + LL+I+ + Q
Sbjct: 99 YVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDN 158
Query: 110 -----LLRNTAA--GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162
+ N K K + Q E + QP +
Sbjct: 159 LPETLIGANPEYYLRKCLEKWGKDFSAF----------HPQALAEYIRCFSQPAVIHATC 208
Query: 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDP----WEPIELGRAYGNFDSVEDFIV 218
+ + ++ ++ CPVL+ WG+K ++ + R V
Sbjct: 209 EDYRAAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRER--AIDVS-GQS 265
Query: 219 LPNVGHCPQDEAPHLVNPLVESFVT 243
LP GH +EAP + +F+T
Sbjct: 266 LP-CGHFLPEEAPEETYQAIYNFLT 289
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 1e-10
Identities = 33/251 (13%), Positives = 74/251 (29%), Gaps = 37/251 (14%)
Query: 3 LAKSH-RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC-KDVVKDQAFFIC- 59
LA++ ++DL G+G + + + F + V + +
Sbjct: 39 LARTQCAALTLDLPGHGTNPERHC--------DNFAEAVEMIEQTVQAHVTSEVPVILVG 90
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNIS-----LRMLHIKKQPW-YGRPLIRSFQNLLRN 113
S+GG + + + I L+ K W + + + F
Sbjct: 91 YSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIE 150
Query: 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSG 173
+ + V +S + + + L+ + L + A + L
Sbjct: 151 HVLSDWYQQAVFSSLN------------HEQRQTLIAQRSA-NLGSSVAHMLLATSLAKQ 197
Query: 174 GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233
L L +K P+ G++D + + + + GH E P
Sbjct: 198 PYLLPAL-QALKLPIHYVCGEQD-----SKFQQLAESSGLS-YSQVAQAGHNVHHEQPQA 250
Query: 234 VNPLVESFVTR 244
+V++ +
Sbjct: 251 FAKIVQAMIHS 261
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 7e-10
Identities = 41/262 (15%), Positives = 68/262 (25%), Gaps = 64/262 (24%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+K RV D G+G+S+ P YT E + + +A F S+
Sbjct: 49 LSKHFRVLRYDTRGHGHSEAPKGP-------YTIEQLTGDVLGLMDTLKIARANFCGLSM 101
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRP-LIRSFQNLLRNTAAGKLFY 121
GG + + ++ R I L NTAA
Sbjct: 102 GG----------------LTGVALAAR-----------HADRIERV--ALCNTAAR---- 128
Query: 122 KMVATSESVRN-ILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE-- 178
+ + E + + + ++ + V E
Sbjct: 129 --IGSPEVWVPRAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGY 186
Query: 179 -------------ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVG 223
P +K P L+ G D GR ++ ++ L
Sbjct: 187 ASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGREL--AQAIAGARYVELD-AS 243
Query: 224 HCPQDEAPHLVNPLVESFVTRH 245
H E V F+T
Sbjct: 244 HISNIERADAFTKTVVDFLTEQ 265
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 2e-09
Identities = 31/243 (12%), Positives = 69/243 (28%), Gaps = 49/243 (20%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGG 64
++ G+G P + + W + + + + ++ S+GG
Sbjct: 45 TCHAPIYKGHGVP----PEELVH---TGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGG 97
Query: 65 LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV 124
+ L+ P G++ + ++IK + ++ + + K
Sbjct: 98 VFSLKLGYTVP--IEGIVTMCA---PMYIKSEETMYEGVLEYARE----------YKKRE 142
Query: 125 ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQV 184
SE + + T T L L+ ADV + L +
Sbjct: 143 GKSEEQIEQEMEKFKQTPMKT--LKA------LQELIADV-------------RDHLDLI 181
Query: 185 KCPVLIAWGDKDPWEPIELGRA-YGNFDSVE-DFIVLPNVGHC-PQDEAPHLVNPLVESF 241
P + D + Y +S GH D+ ++ + +F
Sbjct: 182 YAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAF 241
Query: 242 VTR 244
+
Sbjct: 242 LES 244
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 4e-09
Identities = 42/246 (17%), Positives = 77/246 (31%), Gaps = 52/246 (21%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGL 65
V L G+G D TF W + + + + + F S+GG
Sbjct: 69 TVCLPRLKGHGTH----YEDMER---TTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGT 121
Query: 66 VGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVA 125
+ L A P+I G++ +N ++ + I G L R ++
Sbjct: 122 LTLYLAEHHPDI-CGIVPINAAVDIPAIAAGMTGGGELPRYLDSI--------------- 165
Query: 126 TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVK 185
++N + T L++ L A + L ++
Sbjct: 166 -GSDLKNPDVKELAYEKTPTASLLQ------LARLMAQT-------------KAKLDRIV 205
Query: 186 CPVLIAWGDKD----PWEPIELGRAYGNFDSVEDFIVLPNVGHC-PQDEAPHLVNPLVES 240
CP LI D+D P + + + + + + L N H D ++
Sbjct: 206 CPALIFVSDEDHVVPPGNADIIFQGISSTEK--EIVRLRNSYHVATLDYDQPMIIERSLE 263
Query: 241 FVTRHA 246
F +HA
Sbjct: 264 FFAKHA 269
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-08
Identities = 39/250 (15%), Positives = 68/250 (27%), Gaps = 54/250 (21%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNS 61
+ VY G+G + P D K + W ++ + + + F S
Sbjct: 47 RSGYGVYVPLFSGHGTVE---PLDILTKG--NPDIWWAESSAAVAHMTAKYAKVFVFGLS 101
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG+ ++A P I G + + L H P + L +
Sbjct: 102 LGGIFAMKALETLPGITAGGVFSSPILPGKH-HLVPGF-LKYAEYMNRLAGKSDESTQIL 159
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ L ++ A V L
Sbjct: 160 AYLPGQ--------------------LAA------IDQFATTV-------------AADL 180
Query: 182 PQVKCPVLIAWGDKD----PWEPIELGRAYGNFDSVEDFIVLPNVGHC-PQDEAPHLVNP 236
VK P I +D +L A N V+ F + H + A H +
Sbjct: 181 NLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVD-FHWYDDAKHVITVNSAHHALEE 239
Query: 237 LVESFVTRHA 246
V +F+ +
Sbjct: 240 DVIAFMQQEN 249
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 5e-08
Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 7/116 (6%)
Query: 7 HRVYSIDLIGYGYSDKP-NPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGL 65
+RV +ID GYG S K + Y + + +QAF + + G
Sbjct: 55 YRVVAIDQRGYGRSSKYRVQKA------YRIKELVGDVVGVLDSYGAEQAFVVGHDWGAP 108
Query: 66 VGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
V A + P+ C G++ +++ + P R L G+++Y
Sbjct: 109 VAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWY 164
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 3e-06
Identities = 35/244 (14%), Positives = 75/244 (30%), Gaps = 16/244 (6%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSI 62
+ H V ++DL G + K F + S L +F + ++ + +++
Sbjct: 37 SSGHNVTALDLGASGINPKQ------ALQIPNFSDYLSPLMEFMASLPANEKIILVGHAL 90
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GGL +A PE + L+ + +I + L
Sbjct: 91 GGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTN 150
Query: 123 MVATSESVRNILCQ-CYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
T + L Y+ + L +++P A D+ E L +
Sbjct: 151 PPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKE------VVLSSKRY 204
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
VK ++A ++ E + + ++ + H P + + S
Sbjct: 205 GSVKRVFIVA--TENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMSKPQQLFTTLLSI 262
Query: 242 VTRH 245
++
Sbjct: 263 ANKY 266
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 7e-06
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 9/72 (12%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L + + Y +DL GYG ++ P E A + F + + +
Sbjct: 38 ALPEGYAFYLLDLPGYGRTEGPR---------MAPEELAHFVAGFAVMMNLGAPWVLLRG 88
Query: 62 IGGLVGLQAAVM 73
+G +G +
Sbjct: 89 LGLALGPHLEAL 100
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 45.4 bits (106), Expect = 9e-06
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 6/125 (4%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSI 62
VY+ID + R + + TW S + + + + ++ + S
Sbjct: 94 FNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESF 153
Query: 63 GGLVGLQAAVM-EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG+ L + + +G+ILL+ I+ + +Y + + +
Sbjct: 154 GGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPK-FYTPEVNSIEEMEAKGIYVIPSRG 212
Query: 122 KMVAT 126
Sbjct: 213 GPNNP 217
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 2e-05
Identities = 30/237 (12%), Positives = 62/237 (26%), Gaps = 25/237 (10%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSI 62
A H+V ++DL G + +F+ ++ L F + + + + S
Sbjct: 28 ALGHKVTALDLAASGVDPRQIEEI------GSFDEYSEPLLTFLEALPPGEKVILVGESC 81
Query: 63 GGLVGLQAAVMEPEICRGMILLNISL-----RMLHIKKQPWYGRPLIRSFQNLLRNTAAG 117
GGL AA E + N L ++ + P +
Sbjct: 82 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGK 141
Query: 118 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP 177
++ + + + Y EL + + + G
Sbjct: 142 EITGLKLGFTL----LRENLYTLCGPEEYELAKMLTRKGSLFQNILAK-------RPFFT 190
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234
+E +K + D+D E + + H Q +
Sbjct: 191 KEGYGSIKKIYVWT--DQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEI 245
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 9e-05
Identities = 30/235 (12%), Positives = 69/235 (29%), Gaps = 19/235 (8%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSI 62
+ H+V ++DL G + + +TF ++ L + + D+ + +S
Sbjct: 35 SAGHKVTAVDLSAAGINPRR------LDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSF 88
Query: 63 GGLVGLQAAVMEPEICRGMILLNISL---RMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
GG+ A PE + ++ + Y + + G
Sbjct: 89 GGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNP 148
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEE 179
++ + + + + + S EL + + +PG E
Sbjct: 149 ENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAK-------AKKFSTE 201
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234
V + ++D P+E + + + + H P V
Sbjct: 202 RYGSV--KRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGMLSQPREV 254
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 1e-04
Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 28/193 (14%)
Query: 9 VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQA----FFICNSIGG 64
V++ D +G+G S+ R F + + + KD F + +S+GG
Sbjct: 72 VFAHDHVGHGQSEGE--RMVVSD----FHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGG 125
Query: 65 LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV 124
+ + A P GM+L++ L + + + + + ++L N ++G + ++
Sbjct: 126 AIAILTAAERPGHFAGMVLIS-PLVLANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVL 184
Query: 125 ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQV 184
+ +++ + +D L+ + ++ + E LP++
Sbjct: 185 SRNKTEVD---IYNSD------PLICR------AGLKVCFGIQL--LNAVSRVERALPKL 227
Query: 185 KCPVLIAWGDKDP 197
P L+ G D
Sbjct: 228 TVPFLLLQGSADR 240
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 2e-04
Identities = 53/290 (18%), Positives = 99/290 (34%), Gaps = 90/290 (31%)
Query: 38 TW--ASQLNDF-CKDVVKDQAFFI----CNSIGGLVG-LQA--AVMEPEIC-RGMILLNI 86
TW + + + + F++ CNS ++ LQ ++P R NI
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 87 SLRMLHIKKQPWYGRPLI--RSFQN-LL-----RNTAAGKLFY---KMVATS--ESVRNI 133
LR+ I+ + R L+ + ++N LL +N A F K++ T+ + V +
Sbjct: 224 KLRIHSIQAEL---RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF 280
Query: 134 LCQCYNDTSQVTEELVEKILQPGLETG-AADVFLEFICYSGGPLPEELL---PQVKCPVL 189
L ++ T + L + L+++ LP E+L P+ +
Sbjct: 281 L------SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS--I 332
Query: 190 IA---------WGDKDPW-------------------EPIELGRAYGNFDSVEDFIVLP- 220
IA W D W EP E + + + V P
Sbjct: 333 IAESIRDGLATW---DNWKHVNCDKLTTIIESSLNVLEPAEYRKMF------DRLSVFPP 383
Query: 221 NV-----------GHCPQDEAPHLVNPLVE-SFVTRHATPPASVSAASLY 258
+ + + +VN L + S V + +++S S+Y
Sbjct: 384 SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP-KESTISIPSIY 432
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 3e-04
Identities = 32/246 (13%), Positives = 70/246 (28%), Gaps = 19/246 (7%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSI 62
A H+V ++DL G + + T + L + + + D+ + +S+
Sbjct: 29 AAGHKVTALDLAASGTDLRK------IEELRTLYDYTLPLMELMESLSADEKVILVGHSL 82
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA---AGKL 119
GG+ A P+ + L + + R+ +T G
Sbjct: 83 GGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSP 142
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEE 179
+ + + + + Y S L +++P +E
Sbjct: 143 EEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSK-------AKYFTDE 195
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239
V + +D P E R + V + I + H P + +
Sbjct: 196 RFGSV--KRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLL 253
Query: 240 SFVTRH 245
++
Sbjct: 254 EIAHKY 259
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* Length = 236 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 4e-04
Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 13/65 (20%)
Query: 169 ICYSGGPLPEEL--LPQVKCPVLIAWGDKDPWEPIE-------LGRAYGNFDSVEDFIVL 219
+ Y G L ++L +P+VK P L G +D + P A
Sbjct: 142 VGYYGVGLEKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLL----QVHWY 197
Query: 220 PNVGH 224
GH
Sbjct: 198 EEAGH 202
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 4e-04
Identities = 31/193 (16%), Positives = 71/193 (36%), Gaps = 28/193 (14%)
Query: 9 VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQA----FFICNSIGG 64
V++ D +G+G S+ R F + + + KD F + +S+GG
Sbjct: 90 VFAHDHVGHGQSEGE--RMVVSD----FHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGG 143
Query: 65 LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV 124
+ + A P GM+L++ L + + + + + +L N + G + ++
Sbjct: 144 AIAILTAAERPGHFAGMVLIS-PLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVL 202
Query: 125 ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQV 184
+ +++ + +D L+ + ++ + E LP++
Sbjct: 203 SRNKTEVD---IYNSD------PLICR------AGLKVCFGIQL--LNAVSRVERALPKL 245
Query: 185 KCPVLIAWGDKDP 197
P L+ G D
Sbjct: 246 TVPFLLLQGSADR 258
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 42/243 (17%), Positives = 71/243 (29%), Gaps = 59/243 (24%)
Query: 9 VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLND----FCKDVVKDQAFFICNSIGG 64
D+ G+G SD F D +T W + + K + +S GG
Sbjct: 59 TLRADMYGHGKSDG----KFED---HTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGG 111
Query: 65 LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV 124
L + AA ME +I + +I + R L +
Sbjct: 112 LSVMLAAAMERDIIKALIP--------------LSPAA---MIPEIARTGELLGLKFD-- 152
Query: 125 ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQV 184
E + +++ + E+ + +
Sbjct: 153 --------------------PENIPDELDAWDGRKLKGNYVRVAQTIR----VEDFVDKY 188
Query: 185 KCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQDEAPHLVNPLVESFV 242
PVLI GD+D P E A+ ++ + +P HC D LV V+ F+
Sbjct: 189 TKPVLIVHGDQDEAVPYEASVAF--SKQYKNCKLVTIPGDTHCY-DHHLELVTEAVKEFM 245
Query: 243 TRH 245
Sbjct: 246 LEQ 248
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 261 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.98 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.98 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.98 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.98 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.98 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.97 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.97 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.97 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.97 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.97 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.97 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.97 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.97 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.97 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.97 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.97 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.97 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.97 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.97 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.97 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.97 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.97 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.97 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.97 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.97 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.96 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.96 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.96 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.96 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.96 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.96 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.96 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.96 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.96 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.96 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.96 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.96 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.96 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.96 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.96 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.96 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.95 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.95 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.92 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.95 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.95 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.95 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.95 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.95 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.95 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.95 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.95 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.95 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.94 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.94 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.94 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.94 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.94 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.94 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.94 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.93 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.93 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.93 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.93 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.93 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.93 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.92 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.92 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.92 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.92 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.92 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.91 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.9 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.9 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.9 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.9 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.89 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.89 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.89 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.88 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.87 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.87 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.87 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.86 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.86 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.85 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.85 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.85 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.85 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.85 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.85 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.84 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.84 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.84 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.84 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.83 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.82 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.82 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.81 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.81 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.8 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.8 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.79 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.79 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.78 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.78 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.78 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.77 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.77 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.77 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.76 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.76 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.76 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.75 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.74 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.73 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.73 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.73 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.73 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.73 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.72 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.72 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.71 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.71 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.71 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.71 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.7 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.7 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.69 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.69 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.68 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.67 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.67 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.67 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.66 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.65 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.65 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.65 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.65 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.65 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.64 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.64 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.64 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.64 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.63 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.62 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.62 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.61 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.6 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.6 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.59 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.59 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.58 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.57 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.56 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.55 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.54 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.54 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.53 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.53 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.53 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.51 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.5 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.47 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.46 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.46 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.45 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.45 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.43 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.43 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.42 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.41 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.4 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.4 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.4 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.39 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.38 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.38 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.36 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.34 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.34 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.34 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.33 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.32 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.3 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.28 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.25 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.24 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.2 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.19 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.14 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.13 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.12 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.11 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.1 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.1 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.02 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.01 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 98.94 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 98.81 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 98.78 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 98.72 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 98.69 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 98.61 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 98.58 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.5 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 98.41 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 98.24 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.2 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 97.76 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 97.58 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.5 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 97.45 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.21 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.1 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 97.03 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 96.97 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 96.96 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 96.93 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 96.9 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.89 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 96.87 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 96.8 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 96.74 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.66 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.55 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.46 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.24 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.1 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.0 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 95.92 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.91 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 95.85 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 95.61 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 95.59 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 95.57 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 95.44 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 95.32 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 95.0 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 94.58 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 94.36 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 94.16 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 93.7 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 93.55 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 93.25 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 93.07 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 92.99 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 92.56 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 92.54 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 92.36 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 92.23 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 91.11 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 91.68 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 91.45 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 91.05 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 90.28 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 89.82 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 89.62 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 89.19 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 88.18 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 85.85 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 84.5 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 82.99 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 81.58 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-35 Score=240.69 Aligned_cols=213 Identities=20% Similarity=0.236 Sum_probs=141.1
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+++. ..|+++++++|+.++++++++++++||||||||.||+.+|+++|++|++|
T Consensus 49 ~L~~~~~vi~~D~rG~G~S~~~~-------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~l 121 (266)
T 3om8_A 49 ALTRHFRVLRYDARGHGASSVPP-------GPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERL 121 (266)
T ss_dssp HHHTTCEEEEECCTTSTTSCCCC-------SCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HhhcCcEEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhhee
Confidence 36789999999999999998753 34899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhh---hHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA---GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
|++++..... + ...+...+......... ...+......+... . ..... .+.+.......
T Consensus 122 vl~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~-~~~~~~~~~~~-- 183 (266)
T 3om8_A 122 VLANTSAWLG-----P--AAQWDERIAAVLQAEDMSETAAGFLGNWFPPALL----E----RAEPV-VERFRAMLMAT-- 183 (266)
T ss_dssp EEESCCSBCC-----C--SHHHHHHHHHHHHCSSSHHHHHHHHHHHSCHHHH----H----SCCHH-HHHHHHHHHTS--
T ss_pred eEecCcccCC-----c--hhHHHHHHHHHHccccHHHHHHHHHHHhcChhhh----h----cChHH-HHHHHHHHHhC--
Confidence 9999754321 0 00111111111110000 00000000011000 0 00000 01111111110
Q ss_pred CchHHHHHH-HHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 159 TGAADVFLE-FICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 159 ~~~~~~~~~-~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
. ...+.. +......+ ..+.+.+|++|||+|+|++|.++|++.++.+.+.+|++++++++ +||++++|+|++|++.
T Consensus 184 -~-~~~~~~~~~~~~~~d-~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~a~~~~i~-~gH~~~~e~p~~~~~~ 259 (266)
T 3om8_A 184 -N-RHGLAGSFAAVRDTD-LRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLP-AVHLSNVEFPQAFEGA 259 (266)
T ss_dssp -C-HHHHHHHHHHHHTCB-CTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEES-CCSCHHHHCHHHHHHH
T ss_pred -C-HHHHHHHHHHhhccc-hhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEeC-CCCCccccCHHHHHHH
Confidence 0 011111 11111111 23567899999999999999999998888888878889999997 8999999999999999
Q ss_pred HHHHHH
Q 024900 238 VESFVT 243 (261)
Q Consensus 238 l~~fl~ 243 (261)
|.+||+
T Consensus 260 i~~Fl~ 265 (266)
T 3om8_A 260 VLSFLG 265 (266)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999985
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=239.42 Aligned_cols=216 Identities=23% Similarity=0.346 Sum_probs=142.0
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++.++++|+||||||.||+.+|+++|++|++||
T Consensus 51 L~~~~~vi~~Dl~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lv 124 (282)
T 1iup_A 51 LSKFYRVIAPDMVGFGFTDRPEN------YNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMV 124 (282)
T ss_dssp HTTTSEEEEECCTTSTTSCCCTT------CCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred hccCCEEEEECCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHH
Confidence 67899999999999999987531 248999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
++++...... + .. .........+ ..+.+...+.....+....+++...............
T Consensus 125 l~~~~~~~~~----~---~~---~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (282)
T 1iup_A 125 LMGAAGTRFD----V---TE---GLNAVWGYTP----------SIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQ 184 (282)
T ss_dssp EESCCCSCCC----C---CH---HHHHHHTCCS----------CHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHH
T ss_pred eeCCccCCCC----C---CH---HHHHHhcCCC----------cHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHH
Confidence 9997532100 0 00 0100000000 0000011111101111111122211111000001111
Q ss_pred HHHHHH--------HhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhH
Q 024900 163 DVFLEF--------ICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 163 ~~~~~~--------~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
..+..+ .... ....+.+.+|++|||+|+|++|.++|.+.++.+.+..+++++++++++||++++|+|++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 262 (282)
T 1iup_A 185 ESFSSMFPEPRQRWIDAL--ASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRF 262 (282)
T ss_dssp HHHHHHSCSSTHHHHHHH--CCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHH
T ss_pred HHHHHHHhcccccccccc--ccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEECCCCCCccccCHHHH
Confidence 111000 0000 011245788999999999999999999887777777788999999999999999999999
Q ss_pred HHHHHHHHHhcC
Q 024900 235 NPLVESFVTRHA 246 (261)
Q Consensus 235 ~~~l~~fl~~~~ 246 (261)
++.|.+|+++..
T Consensus 263 ~~~i~~fl~~~~ 274 (282)
T 1iup_A 263 NRLVVEFFNEAN 274 (282)
T ss_dssp HHHHHHHHHTC-
T ss_pred HHHHHHHHhcCC
Confidence 999999998744
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-34 Score=236.90 Aligned_cols=234 Identities=14% Similarity=0.114 Sum_probs=142.3
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+||++|+||||.|+++ .. .+...|+++++++|+.++++++++++++||||||||.||+.+|+.+|++|++|
T Consensus 51 ~L~~~~~via~Dl~G~G~S~~~-~~--~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~l 127 (294)
T 1ehy_A 51 PLAEHYDVIVPDLRGFGDSEKP-DL--NDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKA 127 (294)
T ss_dssp HHHTTSEEEEECCTTSTTSCCC-CT--TCGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEE
T ss_pred HHhhcCEEEecCCCCCCCCCCC-cc--ccccCcCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEE
Confidence 3677899999999999999875 20 00014899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcCh----HHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATS----ESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
|+++++..... ......... ...+............... ... .....++.....+...++++.++.+.....
T Consensus 128 vl~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (294)
T 1ehy_A 128 AIFDPIQPDFG-PVYFGLGHV-HESWYSQFHQLDMAVEVVG--SSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCM 203 (294)
T ss_dssp EEECCSCTTC-------------CCHHHHHTTCHHHHHHHT--SCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHT
T ss_pred EEecCCCCCcc-hhhccchhc-cCceEEEecCcchhHHHhc--cchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhc
Confidence 99997432111 000000000 0000000000000000000 001 111122222222223344544443322211
Q ss_pred CCchHHHHHHHH-hhcCCCC--c-cccCCCCCCCEEEEecCCCCCCCc-hhhhhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 158 ETGAADVFLEFI-CYSGGPL--P-EELLPQVKCPVLIAWGDKDPWEPI-ELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 158 ~~~~~~~~~~~~-~~~~~~~--~-~~~l~~i~~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
..........+. ....... . ...+.+|+||||+|+|++|.++|. +..+.+++..|++++++++++||++++|+|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 283 (294)
T 1ehy_A 204 KPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPE 283 (294)
T ss_dssp STTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHH
T ss_pred CCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCceEEeCCCCCChhhhCHH
Confidence 122211111111 1111000 0 113458999999999999998883 4556666667889999999999999999999
Q ss_pred hHHHHHHHHH
Q 024900 233 LVNPLVESFV 242 (261)
Q Consensus 233 ~~~~~l~~fl 242 (261)
+|++.|.+||
T Consensus 284 ~~~~~i~~fl 293 (294)
T 1ehy_A 284 IAIDRIKTAF 293 (294)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999999997
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-34 Score=234.27 Aligned_cols=221 Identities=18% Similarity=0.206 Sum_probs=142.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++.++++||||||||.||+.+|+.+|++|+++
T Consensus 37 ~L~~~~~vi~~Dl~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~l 110 (268)
T 3v48_A 37 VLEQEYQVVCYDQRGTGNNPDTLA------EDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVL 110 (268)
T ss_dssp HHHTTSEEEECCCTTBTTBCCCCC------TTCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred HHhhcCeEEEECCCCCCCCCCCcc------ccCCHHHHHHHHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhChhhceEE
Confidence 367889999999999999986532 35899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHh----hcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM----VATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
|++++........ ..........+...... .+... ......... .......+....... .
T Consensus 111 vl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~--~ 174 (268)
T 3v48_A 111 ISVNGWLRINAHT------RRCFQVRERLLYSGGAQ-AWVEAQPLFLYPADWMAA-------RAPRLEAEDALALAH--F 174 (268)
T ss_dssp EEESCCSBCCHHH------HHHHHHHHHHHHHHHHH-HHHHHHHHHHSCHHHHHT-------THHHHHHHHHHHHHT--C
T ss_pred EEeccccccchhh------hHHHHHHHHHHhccchh-hhhhhhhhhcCchhhhhc-------ccccchhhHHHHHhh--c
Confidence 9998753221000 00000000011000000 00000 000000000 000000000001100 0
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
.........+......+ ..+.+.+|+||||+|+|++|.++|.+.++.+.+..|++++++++++||++++|+|++|++.
T Consensus 175 -~~~~~~~~~~~~~~~~d-~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~ 252 (268)
T 3v48_A 175 -QGKNNLLRRLNALKRAD-FSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNAL 252 (268)
T ss_dssp -CCHHHHHHHHHHHHHCB-CTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCTTHHHHCHHHHHHH
T ss_pred -CchhHHHHHHHHHhccc-hhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCcCeEEEeCCCCcchhhcCHHHHHHH
Confidence 01111111111111111 1345788999999999999999999888888777888999999999999999999999999
Q ss_pred HHHHHHhcC
Q 024900 238 VESFVTRHA 246 (261)
Q Consensus 238 l~~fl~~~~ 246 (261)
|.+||.+..
T Consensus 253 i~~fl~~~~ 261 (268)
T 3v48_A 253 LLNGLASLL 261 (268)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998753
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=233.33 Aligned_cols=223 Identities=20% Similarity=0.163 Sum_probs=144.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||+|+.+.. ..|+++++++|+.++++++++++++||||||||.||+.+|+++|++|++||
T Consensus 60 L~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lv 133 (286)
T 2puj_A 60 VDAGYRVILKDSPGFNKSDAVVM------DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLI 133 (286)
T ss_dssp HHTTCEEEEECCTTSTTSCCCCC------SSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HhccCEEEEECCCCCCCCCCCCC------cCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEE
Confidence 56789999999999999987531 248999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc-cCCCCch
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ-PGLETGA 161 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 161 (261)
++++...... ............+...... ...+.+...+.....+....+++.+..... .......
T Consensus 134 l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (286)
T 2puj_A 134 LMGPGGLGPS--MFAPMPMEGIKLLFKLYAE-----------PSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEH 200 (286)
T ss_dssp EESCSCCCCC--SSSCSSCHHHHHHHHHHHS-----------CCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred EECccccCCC--cccccchhhHHHHHHHhhC-----------CcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHH
Confidence 9997542110 0000000111111111000 011111111211111111122332222111 0000111
Q ss_pred HHHHHHHHhhc--CCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 162 ADVFLEFICYS--GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 162 ~~~~~~~~~~~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
...+....... ......+.+++|++|||+|+|++|.++|++.++.+.+..|++++++++++||++++|+|++|++.|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 280 (286)
T 2puj_A 201 LKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVI 280 (286)
T ss_dssp HHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred HHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCCCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 11111101000 0001234578899999999999999999988777777778899999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+||++
T Consensus 281 ~fl~~ 285 (286)
T 2puj_A 281 DFLRH 285 (286)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99975
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=233.14 Aligned_cols=222 Identities=19% Similarity=0.212 Sum_probs=145.4
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++.++++||||||||.||+.+|+++|++|++|
T Consensus 61 ~L~~~~~via~Dl~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~l 134 (291)
T 2wue_A 61 VLARHFHVLAVDQPGYGHSDKRAE------HGQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRL 134 (291)
T ss_dssp HHTTTSEEEEECCTTSTTSCCCSC------CSSHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEE
T ss_pred HHHhcCEEEEECCCCCCCCCCCCC------CCcCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEE
Confidence 367789999999999999987531 25899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCC--chhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 82 ILLNISLRMLHIKKQPWYG--RPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
|++++..... ..+.. ......+...... ...+.+...+.....+...++++.+..........
T Consensus 135 vl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (291)
T 2wue_A 135 VLMGPGGLSI----NLFAPDPTEGVKRLSKFSVA-----------PTRENLEAFLRVMVYDKNLITPELVDQRFALASTP 199 (291)
T ss_dssp EEESCSSSCC----CSSSCSSCHHHHHHHHHHHS-----------CCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSH
T ss_pred EEECCCCCCc----cccccccchhhHHHHHHhcc-----------CCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCc
Confidence 9999754211 00000 1111111111000 01111122222111111122333332221110111
Q ss_pred chHHHHHHHH-hhcC-CCC-cc--ccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhH
Q 024900 160 GAADVFLEFI-CYSG-GPL-PE--ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 160 ~~~~~~~~~~-~~~~-~~~-~~--~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
.......... .... ... .. +.+++|+||||+|+|++|.++|++.++.+.+..|++++++++++||++++|+|++|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~ 279 (291)
T 2wue_A 200 ESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEF 279 (291)
T ss_dssp HHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHHHHHHSTTEEEEEESSCCSCHHHHTHHHH
T ss_pred hHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCChhhhCHHHH
Confidence 1111111110 1111 000 11 45788999999999999999998887777776778999999999999999999999
Q ss_pred HHHHHHHHHh
Q 024900 235 NPLVESFVTR 244 (261)
Q Consensus 235 ~~~l~~fl~~ 244 (261)
++.|.+|+++
T Consensus 280 ~~~i~~fl~~ 289 (291)
T 2wue_A 280 NKLTIEFLGG 289 (291)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhc
Confidence 9999999964
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=232.59 Aligned_cols=222 Identities=14% Similarity=0.092 Sum_probs=141.9
Q ss_pred CcCCCCeEEEecCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDK-PNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~-~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.|+++|+|+++|+||||+|+. +.. ...|+++++++|+.+++++++.++++|+||||||.||+.+|+++|+ |++
T Consensus 48 ~L~~~~~vi~~Dl~G~G~S~~~~~~-----~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~ 121 (286)
T 2yys_A 48 DYLEGFRVVYFDQRGSGRSLELPQD-----PRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEG 121 (286)
T ss_dssp GGCTTSEEEEECCTTSTTSCCCCSC-----GGGCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEE
T ss_pred HhcCCCEEEEECCCCCCCCCCCccC-----cccCcHHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hhe
Confidence 478899999999999999986 421 0148999999999999999999999999999999999999999999 999
Q ss_pred eEEeecchhhhhhc-cC-----CCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 024900 81 MILLNISLRMLHIK-KQ-----PWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (261)
Q Consensus 81 lv~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (261)
+|++++.+...... .. .+........+...+.. .........+. .+.......++.+.....
T Consensus 122 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 189 (286)
T 2yys_A 122 AILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKR----------EEPKALFDRLM--FPTPRGRMAYEWLAEGAG 189 (286)
T ss_dssp EEEESCCCBHHHHHHHHHHHTTCCCCSCHHHHHHHHHHH----------SCHHHHHHHHH--CSSHHHHHHHHHHHHHTT
T ss_pred EEEeCCccCcHHHHHHHHHHhccccchhHHHHHHHHhcc----------CChHHHHHhhh--ccCCccccChHHHHHHHh
Confidence 99999754111000 00 00000000011110000 00000011111 000000011222222222
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhH
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
..........+ .+...... ...+.+.+|+||||+|+|++|.+++.+ .+.+.+ .+++++++++++||++++|+|++|
T Consensus 190 ~~~~~~~~~~~-~~~~~~~~-~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~ 265 (286)
T 2yys_A 190 ILGSDAPGLAF-LRNGLWRL-DYTPYLTPERRPLYVLVGERDGTSYPY-AEEVAS-RLRAPIRVLPEAGHYLWIDAPEAF 265 (286)
T ss_dssp CCCCSHHHHHH-HHTTGGGC-BCGGGCCCCSSCEEEEEETTCTTTTTT-HHHHHH-HHTCCEEEETTCCSSHHHHCHHHH
T ss_pred hccccccchhh-cccccccC-ChhhhhhhcCCCEEEEEeCCCCcCCHh-HHHHHh-CCCCCEEEeCCCCCCcChhhHHHH
Confidence 11111111111 11111111 123457899999999999999999988 877877 888999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 024900 235 NPLVESFVTRH 245 (261)
Q Consensus 235 ~~~l~~fl~~~ 245 (261)
++.|.+|+++.
T Consensus 266 ~~~i~~fl~~~ 276 (286)
T 2yys_A 266 EEAFKEALAAL 276 (286)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhh
Confidence 99999999763
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=238.98 Aligned_cols=234 Identities=16% Similarity=0.200 Sum_probs=144.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+||++|+||||.|+++. ..|+++++++|+.++++++++++++||||||||.||+.+|+++|++|++|
T Consensus 51 ~L~~~~~via~Dl~G~G~S~~~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~l 123 (316)
T 3afi_E 51 LVSPVAHCIAPDLIGFGQSGKPD-------IAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGL 123 (316)
T ss_dssp HHTTTSEEEEECCTTSTTSCCCS-------SCCCHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEE
T ss_pred HHhhCCEEEEECCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhhe
Confidence 36788999999999999998753 35899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCC--CCc-----hhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 024900 82 ILLNISLRMLHIKKQPW--YGR-----PLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (261)
|++++..........+. ... .........+............ ........+.. .....++++.+..+..
T Consensus 124 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 199 (316)
T 3afi_E 124 AFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILE--ANAFVERVLPG--GIVRKLGDEEMAPYRT 199 (316)
T ss_dssp EEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTSTTHHHHHHTT--SCHHHHTTTGG--GCSSCCCHHHHHHHHT
T ss_pred eeeccCCCcchhhhccchhhccccccchhHHHHHHHhcCCchhhHHHhc--cchHHHHhccc--ccCCCCCHHHHHHHHh
Confidence 99997321100000000 000 0000000011111000000000 00000000000 0011233333333332
Q ss_pred cCCCCchHHHHHHHHhhcCC--C---------CccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCC
Q 024900 155 PGLETGAADVFLEFICYSGG--P---------LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVG 223 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~--~---------~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~g 223 (261)
.............+...... . ...+.+++|+||||+|+|++|.++|.+..+.+.+..|++++++|+++|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~G 279 (316)
T 3afi_E 200 PFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGL 279 (316)
T ss_dssp TCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSSEEEEEEEEEC
T ss_pred hcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCCCCeEEEcCCCC
Confidence 21111111111111000000 0 001235678999999999999999988777787777889999999999
Q ss_pred CCCCCCChhhHHHHHHHHHHhcC
Q 024900 224 HCPQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 224 H~~~~e~p~~~~~~l~~fl~~~~ 246 (261)
|++++|+|++|++.|.+||++..
T Consensus 280 H~~~~e~p~~~~~~i~~fl~~~~ 302 (316)
T 3afi_E 280 HYLQEDHADAIGRSVAGWIAGIE 302 (316)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhhCHHHHHHHHHHHHhhcC
Confidence 99999999999999999998643
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=228.71 Aligned_cols=221 Identities=16% Similarity=0.161 Sum_probs=139.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-cccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lv 82 (261)
+.+|+|+++|+||||.|+++. ..|+++++++|+.+++++++.++++|+||||||.+++.+++.+ |++|+++|
T Consensus 52 ~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lv 124 (281)
T 3fob_A 52 EAGYRVITYDRRGFGKSSQPW-------EGYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVV 124 (281)
T ss_dssp HTTEEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEE
T ss_pred hCCCEEEEeCCCCCCCCCCCc-------cccCHHHHHHHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEE
Confidence 357999999999999998753 3589999999999999999999999999999999998887775 89999999
Q ss_pred Eeecchhhh-hhccCCCCC-c-hhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCC---CCCCcHHHHHHHhccC
Q 024900 83 LLNISLRML-HIKKQPWYG-R-PLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND---TSQVTEELVEKILQPG 156 (261)
Q Consensus 83 ~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 156 (261)
++++.+... .....+... . .....+........ ......+....+.. .....++.........
T Consensus 125 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (281)
T 3fob_A 125 FAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDR-----------LAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIA 193 (281)
T ss_dssp EESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHH-----------HHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHH
T ss_pred EecCCCcchhccccccccccchhHHHHHHHHhhhhH-----------HHHHHHHHHHhcccccccccchHHHHHHhhhhh
Confidence 998643211 100111000 0 11111111110000 00011111111111 1123333222211110
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh-hhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
...........+..+...+ ..+.+++|+||||+|+|++|.++|.+.. +.+.+..|++++++|+++||++++|+|++|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~d-~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~ 272 (281)
T 3fob_A 194 AGASPKGTLDCITAFSKTD-FRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFN 272 (281)
T ss_dssp HTSCHHHHHHHHHHHHHCC-CHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHH
T ss_pred cccChHHHHHHHHHccccc-hhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhCCCceEEEeCCCCCchhhhhHHHHH
Confidence 0111111111111111111 2345789999999999999999998865 5566667889999999999999999999999
Q ss_pred HHHHHHHH
Q 024900 236 PLVESFVT 243 (261)
Q Consensus 236 ~~l~~fl~ 243 (261)
+.|.+||+
T Consensus 273 ~~i~~Fl~ 280 (281)
T 3fob_A 273 EALLLFLK 280 (281)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhh
Confidence 99999995
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=227.79 Aligned_cols=222 Identities=18% Similarity=0.188 Sum_probs=142.9
Q ss_pred cCC-CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc-cccc
Q 024900 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRG 80 (261)
Q Consensus 3 L~~-~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~ 80 (261)
|++ +|+|+++|+||||+|+.+. ..|+++++++|+.+++++++.++++|+||||||.|++.+|+++|+ +|++
T Consensus 46 L~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~ 118 (277)
T 1brt_A 46 LLDAGYRVITYDRRGFGQSSQPT-------TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAK 118 (277)
T ss_dssp HHHTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEE
T ss_pred HhhCCCEEEEeCCCCCCCCCCCC-------CCccHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEE
Confidence 444 6999999999999998653 348999999999999999999999999999999999999999999 9999
Q ss_pred eEEeecchhhh-hhccCCC--CCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcC----CCCCCcHHHHHHHh
Q 024900 81 MILLNISLRML-HIKKQPW--YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN----DTSQVTEELVEKIL 153 (261)
Q Consensus 81 lv~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 153 (261)
+|++++..... .....+. ........+........ ..+ ...+....+. .....+++.+..+.
T Consensus 119 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (277)
T 1brt_A 119 VAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADR--YAF---------YTGFFNDFYNLDENLGTRISEEAVRNSW 187 (277)
T ss_dssp EEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCH--HHH---------HHHHHHHHTTHHHHBTTTBCHHHHHHHH
T ss_pred EEEecCcCccccccccCccccccHHHHHHHHHHHhcCc--hhh---------HHHHHHHHhhccccccccCCHHHHHHHH
Confidence 99998743211 0000000 00011111111111000 000 0111111111 01123344333322
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh-hhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
........ ..+........ ....+.+++|++|||+|+|++|.++|.+.. +.+.+..+++++++++++||++++|+|+
T Consensus 188 ~~~~~~~~-~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 265 (277)
T 1brt_A 188 NTAASGGF-FAAAAAPTTWY-TDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAE 265 (277)
T ss_dssp HHHHHSCH-HHHHHGGGGTT-CCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHH
T ss_pred HHHhccch-HHHHHHHHHHh-ccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCCCCcEEEeCCCCcchhhhCHH
Confidence 21111111 11111111011 112345788999999999999999998876 7777767889999999999999999999
Q ss_pred hHHHHHHHHHHh
Q 024900 233 LVNPLVESFVTR 244 (261)
Q Consensus 233 ~~~~~l~~fl~~ 244 (261)
+|++.|.+|+++
T Consensus 266 ~~~~~i~~fl~~ 277 (277)
T 1brt_A 266 EVNTALLAFLAK 277 (277)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999999963
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=228.31 Aligned_cols=213 Identities=18% Similarity=0.265 Sum_probs=139.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||+|+.+. .++++++++|+.+++++++.++++||||||||.||+.+|.++|++|+++
T Consensus 38 ~L~~~~~via~Dl~G~G~S~~~~--------~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 109 (255)
T 3bf7_A 38 DLVNDHNIIQVDVRNHGLSPREP--------VMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKL 109 (255)
T ss_dssp HHTTTSCEEEECCTTSTTSCCCS--------CCCHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHhhCcEEEecCCCCCCCCCCC--------CcCHHHHHHHHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhCcHhhccE
Confidence 36778999999999999998642 3789999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhcc----CC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP----GL 157 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 157 (261)
|++++.+.... ... .......+..... ............+.... ..+.....+... .+
T Consensus 110 vl~~~~p~~~~---~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 171 (255)
T 3bf7_A 110 VAIDIAPVDYH---VRR-HDEIFAAINAVSE---------SDAQTRQQAAAIMRQHL-----NEEGVIQFLLKSFVDGEW 171 (255)
T ss_dssp EEESCCSSCCC---SCC-CHHHHHHHHHHHH---------SCCCSHHHHHHHHTTTC-----CCHHHHHHHHTTEETTEE
T ss_pred EEEcCCcccCC---ccc-HHHHHHHHHhccc---------cccccHHHHHHHHhhhc-----chhHHHHHHHHhccCCce
Confidence 99986432110 000 0111111111100 00001111111111100 011111111110 00
Q ss_pred CCchHHHHHH-HHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 158 ETGAADVFLE-FICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 158 ~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
... ...... +..... .+.+.+++||||+|+|++|.+++++..+.+.+..+++++++++++||++++|+|++|++
T Consensus 172 ~~~-~~~~~~~~~~~~~----~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 246 (255)
T 3bf7_A 172 RFN-VPVLWDQYPHIVG----WEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLR 246 (255)
T ss_dssp SSC-HHHHHHTHHHHHC----CCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCTTEEECCBTTCCSCHHHHCHHHHHH
T ss_pred eec-HHHHHhhhhhccc----cccccccCCCeEEEECCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCccccCCHHHHHH
Confidence 111 111111 111111 12367899999999999999999888777777777899999999999999999999999
Q ss_pred HHHHHHHhc
Q 024900 237 LVESFVTRH 245 (261)
Q Consensus 237 ~l~~fl~~~ 245 (261)
.|.+|+++|
T Consensus 247 ~i~~fl~~~ 255 (255)
T 3bf7_A 247 AIRRYLNDH 255 (255)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999999764
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=226.53 Aligned_cols=224 Identities=17% Similarity=0.187 Sum_probs=139.7
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++.++++|+||||||.||+.+|.++|++|+++|
T Consensus 39 L~~~~~vi~~Dl~G~G~S~~~~~------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 112 (269)
T 2xmz_A 39 FTDNYHVITIDLPGHGEDQSSMD------ETWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLI 112 (269)
T ss_dssp HHTTSEEEEECCTTSTTCCCCTT------SCCCHHHHHHHHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEE
T ss_pred HhhcCeEEEecCCCCCCCCCCCC------CccCHHHHHHHHHHHHHHcCCCcEEEEEECchHHHHHHHHHhCchheeeeE
Confidence 56789999999999999987531 148999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHh-hcCCCCCCcHHHHHHHhccCCCCch
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
++++.+.... . ................+ ............... .+......+++....+.........
T Consensus 113 l~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (269)
T 2xmz_A 113 LESTSPGIKE---------E-ANQLERRLVDDARAKVL-DIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSP 181 (269)
T ss_dssp EESCCSCCSS---------H-HHHHHHHHHHHHHHHHH-HHHCHHHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSCH
T ss_pred EEcCCcccCC---------c-hhHHHHhhhhhHHHHhh-ccccHHHHHHHHHhCccccccccCCHHHHHHHHHHHhccCc
Confidence 9997532110 0 00000000000000000 000000000000000 0100000122222211110001111
Q ss_pred HHHHHHH-Hhhc--CCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 162 ADVFLEF-ICYS--GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 162 ~~~~~~~-~~~~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
..+... .... ......+.+++|+||||+|+|++|.+++.+..+ +.+..+++++++++++||++++|+|++|++.|
T Consensus 182 -~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 259 (269)
T 2xmz_A 182 -HKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLIPNSKCKLISATGHTIHVEDSDEFDTMI 259 (269)
T ss_dssp -HHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHSTTEEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred -HHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhCCCcEEEEeCCCCCChhhcCHHHHHHHH
Confidence 111111 1111 111123457889999999999999988877655 66666789999999999999999999999999
Q ss_pred HHHHHhc
Q 024900 239 ESFVTRH 245 (261)
Q Consensus 239 ~~fl~~~ 245 (261)
.+|+++.
T Consensus 260 ~~fl~~~ 266 (269)
T 2xmz_A 260 LGFLKEE 266 (269)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999764
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=228.44 Aligned_cols=219 Identities=20% Similarity=0.330 Sum_probs=141.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|+++|+|+++|+||||.|+ +.. ..|+++++++|+.+++++++. ++++|+||||||.||+.+|.++|++|+++
T Consensus 62 L~~~~~vi~~Dl~G~G~S~-~~~------~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~l 134 (296)
T 1j1i_A 62 LARHYRVIAMDMLGFGKTA-KPD------IEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNAL 134 (296)
T ss_dssp HTTTSEEEEECCTTSTTSC-CCS------SCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEE
T ss_pred HhhcCEEEEECCCCCCCCC-CCC------CCCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEE
Confidence 6678999999999999998 431 258999999999999999998 89999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++....... . .. +....... ...+.....+.....+....+++.+............
T Consensus 135 vl~~~~~~~~~~----~--~~----~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (296)
T 1j1i_A 135 VLMGSAGLVVEI----H--ED----LRPIINYD----------FTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEAT 194 (296)
T ss_dssp EEESCCBCCCC--------------------CC----------SCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHH
T ss_pred EEECCCCCCCCC----C--ch----HHHHhccc----------CCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcch
Confidence 999975421100 0 00 00000000 0000111111111111222223322221110000001
Q ss_pred HHHHHHHHhh---cC-CCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 162 ADVFLEFICY---SG-GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 162 ~~~~~~~~~~---~~-~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
...+..+... .. .......+.+|+||||+|+|++|.++|++..+.+.+..+++++++++++||++++|+|++|++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 274 (296)
T 1j1i_A 195 RKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANA 274 (296)
T ss_dssp HHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHH
T ss_pred hhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHCCCCEEEEECCCCCCchhcCHHHHHHH
Confidence 1111111100 00 0011235688999999999999999999887777766778899999999999999999999999
Q ss_pred HHHHHHhcCCC
Q 024900 238 VESFVTRHATP 248 (261)
Q Consensus 238 l~~fl~~~~~~ 248 (261)
|.+||++...+
T Consensus 275 i~~fl~~~~~~ 285 (296)
T 1j1i_A 275 TLSFLSLRVDI 285 (296)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHhccCCc
Confidence 99999886644
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=224.98 Aligned_cols=213 Identities=20% Similarity=0.215 Sum_probs=138.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+. ..|+++++++|+.+++++++.++++|+||||||.||+.+|.++|++|++||
T Consensus 49 L~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lv 121 (266)
T 2xua_A 49 LSKHFRVLRYDTRGHGHSEAPK-------GPYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVA 121 (266)
T ss_dssp HHTTSEEEEECCTTSTTSCCCS-------SCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HhcCeEEEEecCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeE
Confidence 5678999999999999998653 348999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhh--hhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT--AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
++++...... + ..+........... ............+... . ..++..+.+.......
T Consensus 122 l~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~~~~- 181 (266)
T 2xua_A 122 LCNTAARIGS----P---EVWVPRAVKARTEGMHALADAVLPRWFTADYM----E--------REPVVLAMIRDVFVHT- 181 (266)
T ss_dssp EESCCSSCSC----H---HHHHHHHHHHHHHCHHHHHHHHHHHHSCHHHH----H--------HCHHHHHHHHHHHHTS-
T ss_pred EecCCCCCCc----h---HHHHHHHHHHHhcChHHHHHHHHHHHcCcccc----c--------CCHHHHHHHHHHHhhC-
Confidence 9997542100 0 00111000000000 0000000000000000 0 0011111110000000
Q ss_pred hHHHHHHH-HhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 161 AADVFLEF-ICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 161 ~~~~~~~~-~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
....+... ........ .+.+.+|++|||+|+|++|.++|++..+.+.+..+++++++++ +||++++|+|++|++.|.
T Consensus 182 ~~~~~~~~~~~~~~~~~-~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~ 259 (266)
T 2xua_A 182 DKEGYASNCEAIDAADL-RPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAGARYVELD-ASHISNIERADAFTKTVV 259 (266)
T ss_dssp CHHHHHHHHHHHHHCCC-GGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEES-CCSSHHHHTHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCc-hhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhCCCCEEEEec-CCCCchhcCHHHHHHHHH
Confidence 00111111 01111112 3457889999999999999999988777777767789999999 999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+|+++
T Consensus 260 ~fl~~ 264 (266)
T 2xua_A 260 DFLTE 264 (266)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 99964
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=224.96 Aligned_cols=228 Identities=21% Similarity=0.309 Sum_probs=142.1
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+.... ...++++++++|+.+++++++.++++|+||||||.|++.+|.++|++|+++
T Consensus 42 ~L~~~~~vi~~Dl~G~G~S~~~~~~~---~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l 118 (271)
T 1wom_A 42 AFEEDHRVILFDYVGSGHSDLRAYDL---NRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHL 118 (271)
T ss_dssp GGTTTSEEEECCCSCCSSSCCTTCCT---TGGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHhcCeEEEECCCCCCCCCCCcccc---cccccHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhCHHhhcce
Confidence 47788999999999999998642110 123689999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++.+....... .+........+...+... ...+.. ....+....... ...++..+.+........
T Consensus 119 vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~- 186 (271)
T 1wom_A 119 VMVGPSPCYLNDPP-EYYGGFEEEQLLGLLEMM--EKNYIG------WATVFAATVLNQ--PDRPEIKEELESRFCSTD- 186 (271)
T ss_dssp EEESCCSCCBEETT-TEECSBCHHHHHHHHHHH--HHCHHH------HHHHHHHHHHCC--TTCHHHHHHHHHHHHHSC-
T ss_pred EEEcCCCcCCCCCc-hhccCCCHHHHHHHHHHH--hhhHHH------HHHHHHHHHhcC--CCchHHHHHHHHHHhcCC-
Confidence 99987542211000 000000000111111000 000000 000000000000 011111111110000000
Q ss_pred HHHHHHHH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 162 ADVFLEFI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 162 ~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
......+. ...... ....+++|++|||+|+|++|.++|.+..+.+.+..+++++++++++||++++|+|++|++.|.+
T Consensus 187 ~~~~~~~~~~~~~~~-~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 265 (271)
T 1wom_A 187 PVIARQFAKAAFFSD-HREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGD 265 (271)
T ss_dssp HHHHHHHHHHHHSCC-CHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCcc-hHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCCCCEEEEeCCCCcCccccCHHHHHHHHHH
Confidence 01111110 011111 2345788999999999999999998887777776778999999999999999999999999999
Q ss_pred HHHhc
Q 024900 241 FVTRH 245 (261)
Q Consensus 241 fl~~~ 245 (261)
|++++
T Consensus 266 fl~~~ 270 (271)
T 1wom_A 266 YLKAH 270 (271)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99864
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-31 Score=222.99 Aligned_cols=219 Identities=21% Similarity=0.301 Sum_probs=142.8
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHH----HHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETW----ASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~----a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
|+++|+|+++|+||||+|+.+.. ..|+++++ ++|+.+++++++.++++|+||||||.|++.+|.++|++|
T Consensus 55 L~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 128 (285)
T 1c4x_A 55 LAENFFVVAPDLIGFGQSEYPET------YPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERF 128 (285)
T ss_dssp HHTTSEEEEECCTTSTTSCCCSS------CCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGE
T ss_pred HhhCcEEEEecCCCCCCCCCCCC------cccchhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHh
Confidence 56779999999999999986531 24899999 999999999999999999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCC--cHHHHHHHhccC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV--TEELVEKILQPG 156 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 156 (261)
+++|++++..... ..+ .. .+...... +. ....+.....+.....+.... .++.+.......
T Consensus 129 ~~lvl~~~~~~~~----~~~--~~---~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (285)
T 1c4x_A 129 DKVALMGSVGAPM----NAR--PP---ELARLLAF-------YA-DPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVA 191 (285)
T ss_dssp EEEEEESCCSSCC----SSC--CH---HHHHHHTG-------GG-SCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHH
T ss_pred heEEEeccCCCCC----Ccc--ch---hHHHHHHH-------hc-cccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhc
Confidence 9999999753210 000 01 11111000 00 001111122222111111112 222222211100
Q ss_pred CCCchHHHHHHHHh-hcCC----CCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCCh
Q 024900 157 LETGAADVFLEFIC-YSGG----PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAP 231 (261)
Q Consensus 157 ~~~~~~~~~~~~~~-~~~~----~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 231 (261)
........+..... .... ....+.+.+|++|||+|+|++|.++|++..+.+.+..+++++++++++||++++|+|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 271 (285)
T 1c4x_A 192 NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERW 271 (285)
T ss_dssp HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHSH
T ss_pred cCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCeeeCHHHHHHHHHhCCCceEEEeCCCCcchhhcCH
Confidence 00111111111110 0000 001235688999999999999999999887777766778999999999999999999
Q ss_pred hhHHHHHHHHHHh
Q 024900 232 HLVNPLVESFVTR 244 (261)
Q Consensus 232 ~~~~~~l~~fl~~ 244 (261)
++|++.|.+||++
T Consensus 272 ~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 272 DAMGPMLMEHFRA 284 (285)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999964
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=234.00 Aligned_cols=221 Identities=18% Similarity=0.149 Sum_probs=138.0
Q ss_pred cCCC-CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~~-~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|+++ |+||++|+||||+|+++.. ...|+++++++|+.++++++++++++||||||||.||+.+|+++|++|++|
T Consensus 70 L~~~g~rvia~Dl~G~G~S~~~~~-----~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~L 144 (310)
T 1b6g_A 70 FAESGARVIAPDFFGFGKSDKPVD-----EEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRL 144 (310)
T ss_dssp HHHTTCEEEEECCTTSTTSCEESC-----GGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEE
T ss_pred HHhCCCeEEEeCCCCCCCCCCCCC-----cCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEE
Confidence 5555 9999999999999987531 135899999999999999999999999999999999999999999999999
Q ss_pred EEeecchh--hhh---hccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 82 ILLNISLR--MLH---IKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 82 v~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
|++++... ... ..............+........ ..... ....... ..++++....+..+.
T Consensus 145 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~~~---~~~~~~~~~~~~~~~ 210 (310)
T 1b6g_A 145 IIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPS--------DLRLD---QFMKRWA---PTLTEAEASAYAAPF 210 (310)
T ss_dssp EEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSCS--------SCCHH---HHHHHHS---TTCCHHHHHHHHTTC
T ss_pred EEeccccccCCccccchhhhhhccchHHHHHHHHhccCc--------hhhhh---hHHhhcC---CCCCHHHHHHHhccc
Confidence 99997532 000 00000000000000110000000 00000 0000000 112233222222211
Q ss_pred CCCc---hHHHHHHHHhhcCC-------CCccccCC-CCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEc--CCCC
Q 024900 157 LETG---AADVFLEFICYSGG-------PLPEELLP-QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVL--PNVG 223 (261)
Q Consensus 157 ~~~~---~~~~~~~~~~~~~~-------~~~~~~l~-~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i--~~~g 223 (261)
.... ....+.... .... ....+.+. +|+||||+|+|++|.++| +..+.+.+..|+++++++ ++||
T Consensus 211 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~ip~~~~~~i~~~~~G 288 (310)
T 1b6g_A 211 PDTSYQAGVRKFPKMV-AQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG-PDVMYPMKALINGCPEPLEIADAG 288 (310)
T ss_dssp SSGGGCHHHHHHHHHH-HSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCC
T ss_pred CCccchHHHHHHHHHh-cccccchhhhhhhHhhhhhccccCceEEEeccCcchhh-hHHHHHHHhcccccceeeecCCcc
Confidence 1100 011111110 0000 00123467 899999999999999998 776777766778888888 9999
Q ss_pred CCCCCCChhhHHHHHHHHHHhc
Q 024900 224 HCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 224 H~~~~e~p~~~~~~l~~fl~~~ 245 (261)
|++++ +|++|++.|.+||++.
T Consensus 289 H~~~~-~p~~~~~~i~~Fl~~~ 309 (310)
T 1b6g_A 289 HFVQE-FGEQVAREALKHFAET 309 (310)
T ss_dssp SCGGG-GHHHHHHHHHHHHHHT
T ss_pred cchhh-ChHHHHHHHHHHHhcc
Confidence 99999 9999999999999753
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-31 Score=218.85 Aligned_cols=224 Identities=17% Similarity=0.209 Sum_probs=137.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-cccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lv 82 (261)
+.+|+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++|+||||||.+++.+++.+ |++|+++|
T Consensus 44 ~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lv 116 (271)
T 3ia2_A 44 SRGYRTIAFDRRGFGRSDQPW-------TGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLV 116 (271)
T ss_dssp TTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEE
T ss_pred hCCceEEEecCCCCccCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEE
Confidence 457999999999999998653 3479999999999999999999999999999999887777765 99999999
Q ss_pred Eeecchhhhhh-ccCCC-CCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 83 LLNISLRMLHI-KKQPW-YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 83 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
++++....... ...+. ........+........ ..+.... ...+... .......++.............
T Consensus 117 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 187 (271)
T 3ia2_A 117 LLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDR--AQFISDF-----NAPFYGI--NKGQVVSQGVQTQTLQIALLAS 187 (271)
T ss_dssp EESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHH--HHHHHHH-----HHHHHTG--GGTCCCCHHHHHHHHHHHHHSC
T ss_pred EEccCCccccCCCCCcccccHHHHHHHHHHHHhhH--HHHHHHh-----hHhhhcc--ccccccCHHHHHHHHhhhhhcc
Confidence 99864322110 00000 00011111111110000 0000000 0000000 0011122222221111000001
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchh-hhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
....+..+..+.... ..+.+.+|+||||+|+|++|.++|++. .+.+.+..+++++.+++++||++++|+|++|++.|.
T Consensus 188 ~~~~~~~~~~~~~~~-~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 266 (271)
T 3ia2_A 188 LKATVDCVTAFAETD-FRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL 266 (271)
T ss_dssp HHHHHHHHHHHHHCB-CHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHhhccC-CcccccCCCCCEEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHH
Confidence 111111111111111 134578999999999999999999886 455566678899999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+||++
T Consensus 267 ~Fl~~ 271 (271)
T 3ia2_A 267 AFLKR 271 (271)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99963
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-31 Score=221.79 Aligned_cols=222 Identities=16% Similarity=0.199 Sum_probs=139.7
Q ss_pred cCC-CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-cccccc
Q 024900 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRG 80 (261)
Q Consensus 3 L~~-~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~ 80 (261)
|++ +|+|+++|+||||+|+.+. ..|+++++++|+.+++++++.++++|+||||||.|++.+|+.+ |++|++
T Consensus 45 L~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~ 117 (276)
T 1zoi_A 45 FLAHGYRVVAHDRRGHGRSSQVW-------DGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAK 117 (276)
T ss_dssp HHHTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCC
T ss_pred HHhCCCEEEEecCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheee
Confidence 443 5999999999999998642 3489999999999999999999999999999999999999887 999999
Q ss_pred eEEeecchhhhh-hccCCC-CCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHH-hhcC---CCCCCcHHHHHHHhc
Q 024900 81 MILLNISLRMLH-IKKQPW-YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILC-QCYN---DTSQVTEELVEKILQ 154 (261)
Q Consensus 81 lv~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~ 154 (261)
+|++++.+.... ....+. ........+........ ......+.. ..+. ......++.+..+..
T Consensus 118 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (276)
T 1zoi_A 118 AVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNR-----------AQFYRDVPAGPFYGYNRPGVEASEGIIGNWWR 186 (276)
T ss_dssp EEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCH-----------HHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHH
T ss_pred eEEecCCCccccccccccccccHHHHHHHHHHHHHhH-----------HHHHHHhhhccccccccccccccHHHHHHHHh
Confidence 999997432110 000000 00011111111110000 000111111 0011 011133333333221
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch-hhhhhccCCCCccEEEcCCCCCCCCCCChhh
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
..........+..+..+.... ..+.+++|++|||+|+|++|.++|.+ ..+.+.+..+++++++++++||++++|+|++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 265 (276)
T 1zoi_A 187 QGMIGSAKAHYDGIVAFSQTD-FTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADV 265 (276)
T ss_dssp HHHHSCHHHHHHHHHHHHSCC-CHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHTHHH
T ss_pred hhhhhhHHHHHHHHHHhcccc-hhhhccccCCCEEEEEcCCCcccChHHHHHHHHhhCCCceEEEcCCCCCchhhhCHHH
Confidence 111111111111111111111 13456789999999999999999887 4455666677899999999999999999999
Q ss_pred HHHHHHHHHH
Q 024900 234 VNPLVESFVT 243 (261)
Q Consensus 234 ~~~~l~~fl~ 243 (261)
|++.|.+|++
T Consensus 266 ~~~~i~~fl~ 275 (276)
T 1zoi_A 266 INADLLAFIR 275 (276)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999995
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.9e-31 Score=220.77 Aligned_cols=223 Identities=22% Similarity=0.267 Sum_probs=144.2
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++.++++|+||||||.+++.+|..+|++|+++|
T Consensus 63 l~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lv 136 (289)
T 1u2e_A 63 VEAGYRVILLDCPGWGKSDSVVN------SGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLV 136 (289)
T ss_dssp HHTTCEEEEECCTTSTTSCCCCC------SSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HhcCCeEEEEcCCCCCCCCCCCc------cccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEE
Confidence 56779999999999999986531 247999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC-CCCch
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG-LETGA 161 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 161 (261)
++++....... ..+ ........+...... ...+.....+.....+.....++......... .....
T Consensus 137 l~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (289)
T 1u2e_A 137 LMGGGTGGMSL-FTP-MPTEGIKRLNQLYRQ-----------PTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDH 203 (289)
T ss_dssp EESCSCCCCCS-SSC-SSCHHHHHHHHHHHS-----------CCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHH
T ss_pred EECCCcccccc-ccc-cchhhHHHHHHHHhc-----------chHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhH
Confidence 99975421100 000 000011111111100 01111222222222222223333332211100 00111
Q ss_pred HHHHHHHHhhc--CCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 162 ADVFLEFICYS--GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 162 ~~~~~~~~~~~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
...+....... ......+.+.+|++|||+|+|++|.++|++..+.+.+..+++++++++++||++++|+|++|++.|.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 283 (289)
T 1u2e_A 204 LENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVL 283 (289)
T ss_dssp HHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTTCEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCCcEEEEeCCCCCchhhcCHHHHHHHHH
Confidence 11111111100 0011234578899999999999999999988777776677899999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+|+++
T Consensus 284 ~fl~~ 288 (289)
T 1u2e_A 284 NFLAR 288 (289)
T ss_dssp HHHTC
T ss_pred HHhcC
Confidence 99964
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.98 E-value=6.1e-31 Score=216.74 Aligned_cols=220 Identities=18% Similarity=0.182 Sum_probs=138.9
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-cccccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lv~ 83 (261)
.+|+|+++|+||||+|+.+. ..|+++++++|+.+++++++.++++|+||||||.+++.+|+.+ |++|+++|+
T Consensus 45 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl 117 (274)
T 1a8q_A 45 AGYRGIAHDRRGHGHSTPVW-------DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVL 117 (274)
T ss_dssp TTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEE
T ss_pred CCCeEEEEcCCCCCCCCCCC-------CCCcHHHHHHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeE
Confidence 46999999999999998642 3489999999999999999999999999999999999988886 999999999
Q ss_pred eecchhhh-hhccCCC-CCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcC---CCCCCcHHHHHHHhccCCC
Q 024900 84 LNISLRML-HIKKQPW-YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN---DTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 84 ~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 158 (261)
+++.+... .....+. ........+........ ..++ ..+....+. .....+++..+.++.....
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (274)
T 1a8q_A 118 LSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTER--SQFW---------KDTAEGFFSANRPGNKVTQGNKDAFWYMAMA 186 (274)
T ss_dssp ESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHH--HHHH---------HHHHHHHTTTTSTTCCCCHHHHHHHHHHHTT
T ss_pred ecCCCccccccccCcccchHHHHHHHHHHhhccH--HHHH---------HHhcccccccccccccccHHHHHHHHHHhhh
Confidence 99743211 0000000 00011111111111000 0000 011101111 0112334433333221111
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch-hhhhhccCCCCccEEEcCCCCCCCCCC--ChhhHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDE--APHLVN 235 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e--~p~~~~ 235 (261)
......+..+..+.... ..+.+++|++|||+|+|++|.++|++ ..+.+.+..+++++++++++||++++| +|++|+
T Consensus 187 ~~~~~~~~~~~~~~~~~-~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~ 265 (274)
T 1a8q_A 187 QTIEGGVRCVDAFGYTD-FTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFN 265 (274)
T ss_dssp SCHHHHHHHHHHHHHCC-CHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHH
T ss_pred cChHHHHHHHhhhhcCc-HHHHhhcCCCCEEEEecCcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceecccCCHHHHH
Confidence 11111111111111111 13457889999999999999999987 445565666789999999999999999 999999
Q ss_pred HHHHHHHH
Q 024900 236 PLVESFVT 243 (261)
Q Consensus 236 ~~l~~fl~ 243 (261)
+.|.+|++
T Consensus 266 ~~i~~fl~ 273 (274)
T 1a8q_A 266 RDLLEFLN 273 (274)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99999985
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.5e-32 Score=230.50 Aligned_cols=227 Identities=17% Similarity=0.258 Sum_probs=138.1
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+||++|+||||+|++..+.+ ...|+++.+++|+.++++++++++++||||||||.||+.+|+++|++|.++|++
T Consensus 81 ~~~~Via~D~rG~G~S~~~~~~~---~~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~ 157 (330)
T 3nwo_A 81 TGRTVIHYDQVGCGNSTHLPDAP---ADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAIC 157 (330)
T ss_dssp HTCCEEEECCTTSTTSCCCTTSC---GGGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEE
T ss_pred cCcEEEEECCCCCCCCCCCCCCc---cccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEe
Confidence 48999999999999998632111 135899999999999999999999999999999999999999999999999999
Q ss_pred ecchhhhhhccCCCCCchhhHHHHHHhhhhh---hhH-HHHHhhcChHHH---HHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTA---AGK-LFYKMVATSESV---RNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
+++....... .....+...+.... ... ........++.. ..++...........++....+.....
T Consensus 158 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (330)
T 3nwo_A 158 NSPASMRLWS-------EAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEA 230 (330)
T ss_dssp SCCSBHHHHH-------HHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHH
T ss_pred cCCcchHHHH-------HHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhcc
Confidence 8754321000 00000000000000 000 000001111111 111111110001111111111100000
Q ss_pred CCchHHHHHHHHh---------hcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 158 ETGAADVFLEFIC---------YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 158 ~~~~~~~~~~~~~---------~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
.. ..+..+.. .... ...+.+.+|++|||+|+|++|.++|. ..+.+.+..|++++++|+++||++++
T Consensus 231 ~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~P~Lvi~G~~D~~~p~-~~~~~~~~ip~~~~~~i~~~gH~~~~ 305 (330)
T 3nwo_A 231 EP---TVYHTMNGPNEFHVVGTLGDW-SVIDRLPDVTAPVLVIAGEHDEATPK-TWQPFVDHIPDVRSHVFPGTSHCTHL 305 (330)
T ss_dssp SC---HHHHHHTCSCSSSCCSGGGGC-BCGGGGGGCCSCEEEEEETTCSSCHH-HHHHHHHHCSSEEEEEETTCCTTHHH
T ss_pred ch---hhhhcccCchhhhhhccccCC-chhhhcccCCCCeEEEeeCCCccChH-HHHHHHHhCCCCcEEEeCCCCCchhh
Confidence 00 01111000 0000 11245788999999999999998765 45556666788999999999999999
Q ss_pred CChhhHHHHHHHHHHhcC
Q 024900 229 EAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 229 e~p~~~~~~l~~fl~~~~ 246 (261)
|+|++|++.|.+||+++.
T Consensus 306 e~p~~~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 306 EKPEEFRAVVAQFLHQHD 323 (330)
T ss_dssp HSHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhcc
Confidence 999999999999998753
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-32 Score=225.72 Aligned_cols=214 Identities=19% Similarity=0.221 Sum_probs=132.8
Q ss_pred cCC-CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~-~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|++ +|+||++|+||||+|+++.. ...|+++++++|+.++++++++++++||||||||.||+.+|+++|++|++|
T Consensus 69 L~~~g~rvia~Dl~G~G~S~~~~~-----~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~l 143 (297)
T 2xt0_A 69 FTAAGGRVVAPDLFGFGRSDKPTD-----DAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRL 143 (297)
T ss_dssp HHHTTCEEEEECCTTSTTSCEESC-----GGGCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEE
T ss_pred HHhCCcEEEEeCCCCCCCCCCCCC-----cccCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEE
Confidence 454 49999999999999987531 125899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++.+.. . .. .......+.......+. . .. ...+.... ..+.++....+.........
T Consensus 144 vl~~~~~~~----~-~~-~~~~~~~~~~~~~~~~~-------~-~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 203 (297)
T 2xt0_A 144 IVMNTALAV----G-LS-PGKGFESWRDFVANSPD-------L-DV---GKLMQRAI---PGITDAEVAAYDAPFPGPEF 203 (297)
T ss_dssp EEESCCCCS----S-SC-SCHHHHHHHHHHHTCTT-------C-CH---HHHHHHHS---TTCCHHHHHHHHTTCSSGGG
T ss_pred EEECCCCCc----c-cC-CchhHHHHHHHhhcccc-------c-ch---hHHHhccC---ccCCHHHHHHHhccccCcch
Confidence 999975310 0 00 00000111111110000 0 00 00000000 11122222222111000000
Q ss_pred HHHHHHHHhhcCC---C-------CccccCC-CCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEE--cCCCCCCCCC
Q 024900 162 ADVFLEFICYSGG---P-------LPEELLP-QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIV--LPNVGHCPQD 228 (261)
Q Consensus 162 ~~~~~~~~~~~~~---~-------~~~~~l~-~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~--i~~~gH~~~~ 228 (261)
......+...... . ...+.+. +|+||||+|+|++|.++| +..+.+.+..|++++.+ +++|||++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~~p~~~~~~~~~~~~GH~~~~ 282 (297)
T 2xt0_A 204 KAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEVMGMLRQAIRGCPEPMIVEAGGHFVQE 282 (297)
T ss_dssp CHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSSGGG
T ss_pred hHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHHHHHHHhCCCCeeEEeccCCCCcCccc
Confidence 0000000000000 0 0013466 899999999999999988 66666666667777654 7899999999
Q ss_pred CChhhHHHHHHHHHH
Q 024900 229 EAPHLVNPLVESFVT 243 (261)
Q Consensus 229 e~p~~~~~~l~~fl~ 243 (261)
+|++|++.|.+||+
T Consensus 283 -~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 283 -HGEPIARAALAAFG 296 (297)
T ss_dssp -GCHHHHHHHHHHTT
T ss_pred -CHHHHHHHHHHHHh
Confidence 99999999999985
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-31 Score=216.07 Aligned_cols=214 Identities=20% Similarity=0.249 Sum_probs=133.0
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||+|+.+ ..|+++++++++.+ .++ ++++|+||||||.||+.+|.++|++|+++|
T Consensus 36 L~~~~~vi~~Dl~G~G~S~~~--------~~~~~~~~~~~l~~---~l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 103 (258)
T 1m33_A 36 LSSHFTLHLVDLPGFGRSRGF--------GALSLADMAEAVLQ---QAP-DKAIWLGWSLGGLVASQIALTHPERVRALV 103 (258)
T ss_dssp HHTTSEEEEECCTTSTTCCSC--------CCCCHHHHHHHHHT---TSC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred hhcCcEEEEeeCCCCCCCCCC--------CCcCHHHHHHHHHH---HhC-CCeEEEEECHHHHHHHHHHHHhhHhhceEE
Confidence 567899999999999999864 23789998887655 344 899999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCC--chhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHH----HhccC
Q 024900 83 LLNISLRMLHIKKQPWYG--RPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEK----ILQPG 156 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 156 (261)
++++.+..... ..+.. ......+...+.... ......++..... ......+.... +....
T Consensus 104 l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (258)
T 1m33_A 104 TVASSPCFSAR--DEWPGIKPDVLAGFQQQLSDDQ-----------QRTVERFLALQTM-GTETARQDARALKKTVLALP 169 (258)
T ss_dssp EESCCSCCBCB--TTBCSBCHHHHHHHHHHHHHHH-----------HHHHHHHHHTTST-TSTTHHHHHHHHHHHHHTSC
T ss_pred EECCCCCcccc--ccccCCCHHHHHHHHHHHhccH-----------HHHHHHHHHHHhc-CCccchhhHHHHHHHHHhcc
Confidence 99875432110 11111 011111111110000 0001111110000 00011111111 11110
Q ss_pred CCC-chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 157 LET-GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 157 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
... ............ .. ..+.+.++++|||+|+|++|.++|.+..+.+.+..+++++++++++||++++|+|++|+
T Consensus 170 ~~~~~~~~~~~~~~~~--~~-~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 246 (258)
T 1m33_A 170 MPEVDVLNGGLEILKT--VD-LRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFC 246 (258)
T ss_dssp CCCHHHHHHHHHHHHH--CC-CTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHH
T ss_pred CCcHHHHHHHHHHHHh--CC-HHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCccceEEEeCCCCCCccccCHHHHH
Confidence 000 011111111111 11 23457789999999999999999988877777777889999999999999999999999
Q ss_pred HHHHHHHHhc
Q 024900 236 PLVESFVTRH 245 (261)
Q Consensus 236 ~~l~~fl~~~ 245 (261)
+.|.+|+++.
T Consensus 247 ~~i~~fl~~~ 256 (258)
T 1m33_A 247 HLLVALKQRV 256 (258)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHHhc
Confidence 9999999763
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=222.19 Aligned_cols=235 Identities=16% Similarity=0.147 Sum_probs=144.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|++.|+|+++|+||||.|+.+. ..|+++++++|+.++++.++.++ ++|+||||||.+++.+|..+|++|+++
T Consensus 53 L~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~l 125 (301)
T 3kda_A 53 LAKRFTVIAPDLPGLGQSEPPK-------TGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARL 125 (301)
T ss_dssp HTTTSEEEEECCTTSTTCCCCS-------SCSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEE
T ss_pred HHhcCeEEEEcCCCCCCCCCCC-------CCccHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEE
Confidence 5667999999999999998752 35899999999999999999998 999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCC--CchhhHHHHHHhhh-hhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 82 ILLNISLRMLHIKKQPWY--GRPLIRSFQNLLRN-TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
|+++++............ .............. ......... .........++..........+++.+..+......
T Consensus 126 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
T 3kda_A 126 VYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIA-GKERFFLEHFIKSHASNTEVFSERLLDLYARSYAK 204 (301)
T ss_dssp EEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTTHHHHHHT-TCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTS
T ss_pred EEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCcchHHHHhc-cchHHHHHHHHHhccCCcccCCHHHHHHHHHHhcc
Confidence 999986432211000000 00000000000000 000000000 00011112222222222223344444333222111
Q ss_pred CchHHHHHHHHh-h----cCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhh
Q 024900 159 TGAADVFLEFIC-Y----SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 159 ~~~~~~~~~~~~-~----~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
.........+.. . .........++++++|||+|+|++| ++....+.+.+..+++++++++++||++++|+|++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 282 (301)
T 3kda_A 205 PHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGAGG--MGTFQLEQMKAYAEDVEGHVLPGCGHWLPEECAAP 282 (301)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCEEEEEECSTTS--CTTHHHHHHHTTBSSEEEEEETTCCSCHHHHTHHH
T ss_pred ccccchHHHHHHhhccchhhcccchhhccccCcceEEEecCCC--CChhHHHHHHhhcccCeEEEcCCCCcCchhhCHHH
Confidence 111111111110 0 0000011234589999999999999 56666667777778899999999999999999999
Q ss_pred HHHHHHHHHHhcCC
Q 024900 234 VNPLVESFVTRHAT 247 (261)
Q Consensus 234 ~~~~l~~fl~~~~~ 247 (261)
|++.|.+|+++...
T Consensus 283 ~~~~i~~~l~~~~~ 296 (301)
T 3kda_A 283 MNRLVIDFLSRGRH 296 (301)
T ss_dssp HHHHHHHHHTTSCC
T ss_pred HHHHHHHHHhhCch
Confidence 99999999987543
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=217.62 Aligned_cols=221 Identities=17% Similarity=0.196 Sum_probs=138.4
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-cccccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lv~ 83 (261)
.+|+|+++|+||||.|+.+. ..|+++++++|+.+++++++.++++|+||||||.+++.+|+.+ |++|+++|+
T Consensus 45 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl 117 (273)
T 1a8s_A 45 QGYRVIAHDRRGHGRSSQPW-------SGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGL 117 (273)
T ss_dssp TTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEE
T ss_pred CCcEEEEECCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEE
Confidence 35999999999999998642 3489999999999999999999999999999999999988886 999999999
Q ss_pred eecchhhhh-hccCCC-CCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHH-hhcC---CCCCCcHHHHHHHhccCC
Q 024900 84 LNISLRMLH-IKKQPW-YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILC-QCYN---DTSQVTEELVEKILQPGL 157 (261)
Q Consensus 84 ~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~ 157 (261)
+++.+.... ....+. ........+........ ......+.. ..+. .....+++.+..++....
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (273)
T 1a8s_A 118 ISAVPPLMLKTEANPGGLPMEVFDGIRQASLADR-----------SQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGM 186 (273)
T ss_dssp ESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHH-----------HHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHH
T ss_pred EcccCcccccCccccccCcHHHHHHHHHHhHhhH-----------HHHHHHhhcccccCcCCcccccCHHHHHHHHHhcc
Confidence 997432110 000000 00011111111110000 000111111 0011 011123333333221111
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch-hhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
.......+..+..+.... ..+.+.+|++|||+|+|++|.++|.+ ..+.+.+..+++++++++++||++++|+|++|++
T Consensus 187 ~~~~~~~~~~~~~~~~~~-~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 265 (273)
T 1a8s_A 187 AAGHKNAYDCIKAFSETD-FTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNA 265 (273)
T ss_dssp HSCHHHHHHHHHHHHHCC-CHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHH
T ss_pred ccchhHHHHHHHHHhccC-hhhhhhcCCCCEEEEECCCCccCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhCHHHHHH
Confidence 111111111111111111 13456789999999999999999987 4455666667899999999999999999999999
Q ss_pred HHHHHHHh
Q 024900 237 LVESFVTR 244 (261)
Q Consensus 237 ~l~~fl~~ 244 (261)
.|.+||++
T Consensus 266 ~i~~fl~~ 273 (273)
T 1a8s_A 266 DLLAFIKG 273 (273)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999963
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-31 Score=216.08 Aligned_cols=221 Identities=18% Similarity=0.239 Sum_probs=138.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-cccccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lv~ 83 (261)
.+|+|+++|+||||.|+.+. ..|+++++++|+.+++++++.++++|+||||||.+++.+++.+ |++|+++|+
T Consensus 47 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl 119 (275)
T 1a88_A 47 HGYRVIAHDRRGHGRSDQPS-------TGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVL 119 (275)
T ss_dssp TTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEE
T ss_pred CCceEEEEcCCcCCCCCCCC-------CCCCHHHHHHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEE
Confidence 46999999999999998642 3489999999999999999999999999999999999988887 999999999
Q ss_pred eecchhhhh-hccCCC-CCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHH-hhcC---CCCCCcHHHHHHHhccCC
Q 024900 84 LNISLRMLH-IKKQPW-YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILC-QCYN---DTSQVTEELVEKILQPGL 157 (261)
Q Consensus 84 ~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~ 157 (261)
+++.+.... ....+. ........+........ ......+.. ..+. .....+++.+..++....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (275)
T 1a88_A 120 VSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANR-----------AQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM 188 (275)
T ss_dssp ESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCH-----------HHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH
T ss_pred ecCCCcccccCccCcccCCHHHHHHHHHHHhhhH-----------HHHHHhhhccccccccCcccccCHHHHHHHHHHhh
Confidence 997432110 000000 00011111111110000 000111111 0011 011133333333221111
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch-hhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
.......+..+..+.... ..+.+.+|++|||+|+|++|.++|.+ ..+.+.+..+++++++++++||++++|+|++|++
T Consensus 189 ~~~~~~~~~~~~~~~~~~-~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 267 (275)
T 1a88_A 189 MGAANAHYECIAAFSETD-FTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNP 267 (275)
T ss_dssp HSCHHHHHHHHHHHHHCC-CHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHH
T ss_pred hcchHhHHHHHhhhhhcc-cccccccCCCCEEEEecCCCccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHH
Confidence 111111111111111111 12346789999999999999999887 4455666667899999999999999999999999
Q ss_pred HHHHHHHh
Q 024900 237 LVESFVTR 244 (261)
Q Consensus 237 ~l~~fl~~ 244 (261)
.|.+|+++
T Consensus 268 ~i~~fl~~ 275 (275)
T 1a88_A 268 DLLAFVKS 275 (275)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhhC
Confidence 99999963
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-31 Score=215.15 Aligned_cols=204 Identities=24% Similarity=0.306 Sum_probs=133.4
Q ss_pred cCCC-CeEEEecCCCCCCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYT---FETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~-~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~---~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
|++. |+|+++|+||||.|+.+. ..|+ +.+.++|+.+++++++.++++|+||||||.+|+.+|+++|++|
T Consensus 47 l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v 119 (254)
T 2ocg_A 47 LNKKLFTVVAWDPRGYGHSRPPD-------RDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYI 119 (254)
T ss_dssp SCTTTEEEEEECCTTSTTCCSSC-------CCCCTTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred HhhCCCeEEEECCCCCCCCCCCC-------CCCChHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHh
Confidence 5554 999999999999997542 2356 7788999999999999999999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|++++...... .....+ ...... .. .... ....+...+. .+.......
T Consensus 120 ~~lvl~~~~~~~~~---------~~~~~~-~~~~~~--~~------~~~~-~~~~~~~~~~------~~~~~~~~~---- 170 (254)
T 2ocg_A 120 HKMVIWGANAYVTD---------EDSMIY-EGIRDV--SK------WSER-TRKPLEALYG------YDYFARTCE---- 170 (254)
T ss_dssp EEEEEESCCSBCCH---------HHHHHH-HTTSCG--GG------SCHH-HHHHHHHHHC------HHHHHHHHH----
T ss_pred hheeEeccccccCh---------hhHHHH-HHHHHH--HH------HHHH-hHHHHHHHhc------chhhHHHHH----
Confidence 99999987532110 000000 000000 00 0000 0000000000 000000000
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
.....+..+..........+.+++|+||||+|+|++|.++|.+..+.+.+..+++++++++++||++++|+|++|+++|
T Consensus 171 -~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 249 (254)
T 2ocg_A 171 -KWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLA 249 (254)
T ss_dssp -HHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHH
T ss_pred -HHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCCCEEEEcCCCCCchhhhCHHHHHHHH
Confidence 0000000000000011123457889999999999999999998877777767789999999999999999999999999
Q ss_pred HHHHH
Q 024900 239 ESFVT 243 (261)
Q Consensus 239 ~~fl~ 243 (261)
.+|++
T Consensus 250 ~~fl~ 254 (254)
T 2ocg_A 250 EDFLQ 254 (254)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99983
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-31 Score=218.04 Aligned_cols=215 Identities=14% Similarity=0.167 Sum_probs=131.9
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-cccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~ 80 (261)
.|+++||||++|+||||+|+++. ..|+++++++|+.++++++++++++||||||||.||+.+|+++ |++|++
T Consensus 49 ~L~~~~rvia~DlrGhG~S~~~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~ 121 (276)
T 2wj6_A 49 ELDADFRVIVPNWRGHGLSPSEV-------PDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPR 121 (276)
T ss_dssp HHTTTSCEEEECCTTCSSSCCCC-------CCCCHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCC
T ss_pred HHhcCCEEEEeCCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhce
Confidence 37789999999999999998753 3589999999999999999999999999999999999999999 999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
||++++.... + ...+...+........... .....+...... ...++..+.+........
T Consensus 122 lvl~~~~~~~------~--~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 181 (276)
T 2wj6_A 122 GIIMDWLMWA------P--KPDFAKSLTLLKDPERWRE----------GTHGLFDVWLDG--HDEKRVRHHLLEEMADYG 181 (276)
T ss_dssp EEEESCCCSS------C--CHHHHHHHHHHHCTTTHHH----------HHHHHHHHHHTT--BCCHHHHHHHHTTTTTCC
T ss_pred EEEecccccC------C--CchHHHHhhhccCcchHHH----------HHHHHHHHhhcc--cchHHHHHHHHHHhhhcc
Confidence 9999864210 0 0011111110000000000 000000000000 001111111111000000
Q ss_pred h------HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCC--chhhhhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 161 A------ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP--IELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 161 ~------~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
. ........... ....+.+.+|++||++++|..+...+ ....+.+.+.+|++++++|+++||++++|+|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~e~P~ 259 (276)
T 2wj6_A 182 YDCWGRSGRVIEDAYGRN--GSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPD 259 (276)
T ss_dssp HHHHHHHHHHHHHHHHHH--CCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHSHH
T ss_pred hhhhhhccchhHHHHhhc--cchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhCCCeEEEEeCCCCCcccccCHH
Confidence 0 00000000000 01123467899999999874433222 22334555667889999999999999999999
Q ss_pred hHHHHHHHHHHhc
Q 024900 233 LVNPLVESFVTRH 245 (261)
Q Consensus 233 ~~~~~l~~fl~~~ 245 (261)
+|++.|.+||++.
T Consensus 260 ~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 260 RAAVHIREFATAI 272 (276)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999764
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=217.41 Aligned_cols=224 Identities=17% Similarity=0.179 Sum_probs=139.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc-cccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lv~ 83 (261)
++|+|+++|+||||.|+.+. ..|+++++++|+.+++++++.++++|+||||||.+++.+|+.+|+ +|+++|+
T Consensus 49 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl 121 (279)
T 1hkh_A 49 QGYRVITYDRRGFGGSSKVN-------TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAF 121 (279)
T ss_dssp TTEEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEE
T ss_pred CCcEEEEeCCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEE
Confidence 36999999999999998653 348999999999999999999999999999999999999999999 9999999
Q ss_pred eecchhhh-hhccCCC-CCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 84 LNISLRML-HIKKQPW-YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 84 ~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
+++..... .....+. ........+........ ..++.. ....+..........++++.+............
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (279)
T 1hkh_A 122 LASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDR--FAWFTD-----FYKNFYNLDENLGSRISEQAVTGSWNVAIGSAP 194 (279)
T ss_dssp ESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCH--HHHHHH-----HHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCT
T ss_pred EccCCcccccCcCCcCCCcHHHHHHHHHHhhhhh--hhhHHH-----HHhhhhhcccCCcccccHHHHHhhhhhhccCcH
Confidence 98743211 0000000 00011111111111000 000000 000001000000112333333322211111111
Q ss_pred HHHHHHHHhhcCCCCccccCCCC---CCCEEEEecCCCCCCCchhh-hhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 162 ADVFLEFICYSGGPLPEELLPQV---KCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i---~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
......+..+ ... ..+.+.+| ++|||+|+|++|.++|++.. +.+.+..+++++++++++||++++|+|++|++.
T Consensus 195 ~~~~~~~~~~-~~~-~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 272 (279)
T 1hkh_A 195 VAAYAVVPAW-IED-FRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAA 272 (279)
T ss_dssp THHHHTHHHH-TCB-CHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHH
T ss_pred HHHHHHHHHH-hhc-hhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhCCCeeEEEeCCCCccchhcCHHHHHHH
Confidence 0111111111 111 12345677 99999999999999998876 667666778999999999999999999999999
Q ss_pred HHHHHHh
Q 024900 238 VESFVTR 244 (261)
Q Consensus 238 l~~fl~~ 244 (261)
|.+|+++
T Consensus 273 i~~fl~~ 279 (279)
T 1hkh_A 273 LKTFLAK 279 (279)
T ss_dssp HHHHHHC
T ss_pred HHHHhhC
Confidence 9999963
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=217.18 Aligned_cols=224 Identities=15% Similarity=0.144 Sum_probs=138.0
Q ss_pred cCC-CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~-~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|++ +|+|+++|+||||+|++..+. ...|+++++++|+.+++++++.++++|+||||||.||+.+|.++|++|++|
T Consensus 47 L~~~G~~vi~~D~rG~G~S~~~~~~----~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 122 (298)
T 1q0r_A 47 LADGGLHVIRYDHRDTGRSTTRDFA----AHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSL 122 (298)
T ss_dssp HHTTTCEEEEECCTTSTTSCCCCTT----TSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHhCCCEEEeeCCCCCCCCCCCCCC----cCCcCHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhhee
Confidence 455 499999999999999862111 135899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhh-hh-------ccCCC---CCchhhHHHHHHhhhhhhhHHHHHhhcCh-HHHHHHH---HhhcCCCCCCcH
Q 024900 82 ILLNISLRML-HI-------KKQPW---YGRPLIRSFQNLLRNTAAGKLFYKMVATS-ESVRNIL---CQCYNDTSQVTE 146 (261)
Q Consensus 82 v~~~~~~~~~-~~-------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~ 146 (261)
|++++..... .. ....+ ........+..+...... .... ....... ..........++
T Consensus 123 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (298)
T 1q0r_A 123 TMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQP-------AEGRAAEVAKRVSKWRILSGTGVPFDD 195 (298)
T ss_dssp EEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSC-------CCSHHHHHHHHHHHHHHHHCSSSCCCH
T ss_pred EEecccCCCcccccchhhhhhhhhhhcccccccHHHHHHHhccCcc-------cccHHHHHHHHHHhhhhccCCCCCCCH
Confidence 9999754110 00 00000 000011111111110000 0000 0000000 000000111222
Q ss_pred HHHHHH----hccCCC-Cch-HHHHHHHHhhcCCCCcccc-CCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEc
Q 024900 147 ELVEKI----LQPGLE-TGA-ADVFLEFICYSGGPLPEEL-LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVL 219 (261)
Q Consensus 147 ~~~~~~----~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~-l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i 219 (261)
+..... +.+... ... ...+ . ........+. +++|++|||+|+|++|.++|++..+.+.+..|+++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i 271 (298)
T 1q0r_A 196 AEYARWEERAIDHAGGVLAEPYAHY---S-LTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEI 271 (298)
T ss_dssp HHHHHHHHHHHHHTTTCCSCCCGGG---G-CCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEE
T ss_pred HHHHHHHHHHhhccCCccchhhhhh---h-hhcCcccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhCCCCEEEEc
Confidence 222111 111000 000 0000 0 0001111345 789999999999999999998888878777888999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 220 PNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 220 ~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
+++|| |+|++|++.|.+|+.++
T Consensus 272 ~~~gH----e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 272 PGMGH----ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp TTCCS----SCCGGGHHHHHHHHHHH
T ss_pred CCCCC----CCcHHHHHHHHHHHHHH
Confidence 99999 88999999999999865
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=213.87 Aligned_cols=228 Identities=18% Similarity=0.160 Sum_probs=145.6
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+.. ...++++++++|+.++++.++.++++++||||||.+++.+|..+|++|+++
T Consensus 45 ~L~~~~~vi~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 119 (278)
T 3oos_A 45 PFTDHYSVYLVNLKGCGNSDSAKN-----DSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKI 119 (278)
T ss_dssp GGGGTSEEEEECCTTSTTSCCCSS-----GGGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEE
T ss_pred HhhcCceEEEEcCCCCCCCCCCCC-----cccCcHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeE
Confidence 467899999999999999986531 135799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCC---CchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 82 ILLNISLRMLHIKKQPWY---GRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
|++++............. .......+........ ........... +...+.......++.+...+.....
T Consensus 120 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (278)
T 3oos_A 120 IVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALN------DDSTVQEERKA-LSREWALMSFYSEEKLEEALKLPNS 192 (278)
T ss_dssp EEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHT------CTTSCHHHHHH-HHHHHHHHHCSCHHHHHHHTTSCCC
T ss_pred EEecCccccccccccchhhhhhchhHHHHHHHHHhhc------ccccCchHHHH-HHHHHhhcccCCcHHHHHHhhcccc
Confidence 999986542111110000 0111111111111000 00000000000 0000000011223444444333222
Q ss_pred CchH-HHHHHHH--hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 159 TGAA-DVFLEFI--CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 159 ~~~~-~~~~~~~--~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
.... ..+..+. ...... ....+.++++|||+|+|++|.++|.+..+.+.+..+++++++++++||++++|+|++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 271 (278)
T 3oos_A 193 GKTVGNRLNYFRQVEYKDYD-VRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEEIDKFN 271 (278)
T ss_dssp CEECHHHHHHHHHTTGGGCB-CHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCSSCHHHHSHHHHH
T ss_pred chhHHHHHHHhhhccccccc-HHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCCCcEEEEcCCcCCCcccccHHHHH
Confidence 1111 1111111 111111 12456889999999999999999998877777666789999999999999999999999
Q ss_pred HHHHHHH
Q 024900 236 PLVESFV 242 (261)
Q Consensus 236 ~~l~~fl 242 (261)
+.|.+||
T Consensus 272 ~~i~~fl 278 (278)
T 3oos_A 272 QFVNDTL 278 (278)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999885
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=214.66 Aligned_cols=219 Identities=12% Similarity=0.095 Sum_probs=135.3
Q ss_pred cC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
|+ .+|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++ .++++||||||||.|++.+|.++|++|++
T Consensus 27 L~~~g~rVia~Dl~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~P~~v~~ 100 (273)
T 1xkl_A 27 LEAAGHKVTALDLAASGTDLRKIE------ELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYA 100 (273)
T ss_dssp HHHTTCEEEECCCTTSTTCCCCGG------GCCSHHHHHHHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEE
T ss_pred HHhCCCEEEEecCCCCCCCccCcc------cccCHHHHHHHHHHHHHHhccCCCEEEEecCHHHHHHHHHHHhChHhheE
Confidence 54 579999999999999976421 34799999999999999997 58999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhh-hhhhHH--HHH--------hhcChHHHHHHHHhhcCCCCCCcHHHH
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN-TAAGKL--FYK--------MVATSESVRNILCQCYNDTSQVTEELV 149 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (261)
||++++...... . ........+...... ...... .+. ....+.... ..+.... ..+..
T Consensus 101 lvl~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~ 169 (273)
T 1xkl_A 101 AVFLAAFMPDSV---H--NSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLA----HKLYQLC--SPEDL 169 (273)
T ss_dssp EEEESCCCCCSS---S--CTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHH----HHTSTTS--CHHHH
T ss_pred EEEEeccCCCCC---C--cHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHHH----HHhhccC--CHHHH
Confidence 999996421100 0 000001111110000 000000 000 000111111 1111110 11111
Q ss_pred ---HHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCC
Q 024900 150 ---EKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226 (261)
Q Consensus 150 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 226 (261)
.....+.. . .... +.. ....... ...++|||+|+|++|.++|++..+.+.+..|++++++|+++||++
T Consensus 170 ~~~~~~~~~~~-~-~~~~---~~~--~~~~~~~--~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~~~~~~i~~aGH~~ 240 (273)
T 1xkl_A 170 ALASSLVRPSS-L-FMED---LSK--AKYFTDE--RFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMA 240 (273)
T ss_dssp HHHHHHCCCBC-C-CHHH---HHH--CCCCCTT--TGGGSCEEEEEETTCTTTTHHHHHHHHHHHCCSEEEEETTCCSCH
T ss_pred HHHHHhcCCCc-h-hhhh---hhc--ccccchh--hhCCCCeEEEEeCCccCCCHHHHHHHHHhCCCCeEEEeCCCCCCc
Confidence 11111100 0 0000 000 0111111 124789999999999999998877777666788999999999999
Q ss_pred CCCChhhHHHHHHHHHHhcCC
Q 024900 227 QDEAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 227 ~~e~p~~~~~~l~~fl~~~~~ 247 (261)
++|+|++|++.|.+|+++...
T Consensus 241 ~~e~P~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 241 MLCEPQKLCASLLEIAHKYNM 261 (273)
T ss_dssp HHHSHHHHHHHHHHHHHHCC-
T ss_pred hhcCHHHHHHHHHHHHHHhcc
Confidence 999999999999999987543
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-30 Score=216.85 Aligned_cols=226 Identities=16% Similarity=0.163 Sum_probs=137.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.|+++|+|+++|+||||+|+++.. ..|+++++++|+.++++++++ ++++||||||||.||+.+|.++|++|++
T Consensus 65 ~L~~~~~via~Dl~GhG~S~~~~~------~~~~~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~ 138 (318)
T 2psd_A 65 HIEPVARCIIPDLIGMGKSGKSGN------GSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKA 138 (318)
T ss_dssp GTTTTSEEEEECCTTSTTCCCCTT------SCCSHHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEE
T ss_pred HhhhcCeEEEEeCCCCCCCCCCCC------CccCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhe
Confidence 477889999999999999987521 348999999999999999999 8999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
||++++....... ...+... ...+.. +.... ..... ..........+.... ...++++.+..+..+....+
T Consensus 139 lvl~~~~~~~~~~-~~~~~~~--~~~~~~-~~~~~-~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 209 (318)
T 2psd_A 139 IVHMESVVDVIES-WDEWPDI--EEDIAL-IKSEE-GEKMV--LENNFFVETVLPSKI--MRKLEPEEFAAYLEPFKEKG 209 (318)
T ss_dssp EEEEEECCSCBSC-CTTSCSC--HHHHHH-HHSTH-HHHHH--TTTCHHHHTHHHHTC--SSCCCHHHHHHHHGGGCSSS
T ss_pred EEEeccccCCccc-hhhhhhH--HHHHHH-Hhccc-chhhh--hcchHHHHhhccccc--cccCCHHHHHHHHHhhcCcc
Confidence 9999854221100 0000000 011111 11000 00000 000000000010000 01122333322222111110
Q ss_pred -hHHHHHHHHhhcC--C----------CCccccCCCC-CCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCC
Q 024900 161 -AADVFLEFICYSG--G----------PLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226 (261)
Q Consensus 161 -~~~~~~~~~~~~~--~----------~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 226 (261)
.......+..... . ....+.+.++ ++|||+|+|++| +++. ..+.+.+..++++++++ ++||++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~~~~~~~~i-~~gH~~ 286 (318)
T 2psd_A 210 EVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPG-FFSN-AIVEGAKKFPNTEFVKV-KGLHFL 286 (318)
T ss_dssp GGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEEEC-SSHH-HHHHHHTTSSSEEEEEE-EESSSG
T ss_pred ccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeEEEEeccc-cCcH-HHHHHHHhCCCcEEEEe-cCCCCC
Confidence 0000000000000 0 0001235677 999999999999 8887 66667777778899899 789999
Q ss_pred CCCChhhHHHHHHHHHHhc
Q 024900 227 QDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 227 ~~e~p~~~~~~l~~fl~~~ 245 (261)
++|+|++|++.|.+||++.
T Consensus 287 ~~e~p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 287 QEDAPDEMGKYIKSFVERV 305 (318)
T ss_dssp GGTCHHHHHHHHHHHHHHH
T ss_pred HhhCHHHHHHHHHHHHHHh
Confidence 9999999999999999864
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=212.72 Aligned_cols=218 Identities=14% Similarity=0.098 Sum_probs=134.9
Q ss_pred cC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
|+ .+|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++ .++++||||||||.|++.+|.++|++|++
T Consensus 26 L~~~g~~via~Dl~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~ 99 (257)
T 3c6x_A 26 LEALGHKVTALDLAASGVDPRQIE------EIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAA 99 (257)
T ss_dssp HHHTTCEEEEECCTTSTTCSCCGG------GCCSHHHHTHHHHHHHHTSCTTCCEEEEEEETHHHHHHHHHHHHGGGEEE
T ss_pred HHhCCCEEEEeCCCCCCCCCCCcc------cccCHHHHHHHHHHHHHhccccCCeEEEEECcchHHHHHHHHhCchhhhe
Confidence 54 479999999999999976421 34899999999999999995 68999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHH--HHH--------hhcChHHHHHHHHhhcCCCCCC-cHHHH
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL--FYK--------MVATSESVRNILCQCYNDTSQV-TEELV 149 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 149 (261)
||++++...... .. .......+..... ...... .+. ....+.... ..+...... .....
T Consensus 100 lVl~~~~~~~~~---~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 169 (257)
T 3c6x_A 100 AVFHNSVLPDTE---HC--PSYVVDKLMEVFP-DWKDTTYFTYTKDGKEITGLKLGFTLLR----ENLYTLCGPEEYELA 169 (257)
T ss_dssp EEEEEECCCCSS---SC--TTHHHHHHHHHSC-CCTTCEEEEEEETTEEEEEEECCHHHHH----HHTSTTSCHHHHHHH
T ss_pred EEEEecccCCCC---Cc--chhHHHHHhhcCc-chhhhhhhhccCCCCccccccccHHHHH----HHHhcCCCHHHHHHH
Confidence 999997421100 00 0000111111000 000000 000 001111111 111111110 00111
Q ss_pred HHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCC
Q 024900 150 EKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 229 (261)
.....+... .... +... .......+ .++|||+|+|++|.++|++..+.+.+..+++++++|+++||++++|
T Consensus 170 ~~~~~~~~~--~~~~---~~~~--~~~~~~~~--~~~P~l~i~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 240 (257)
T 3c6x_A 170 KMLTRKGSL--FQNI---LAKR--PFFTKEGY--GSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLT 240 (257)
T ss_dssp HHHCCCBCC--CHHH---HHHS--CCCCTTTG--GGSCEEEEECTTCSSSCHHHHHHHHHHSCCSEEEECCSCCSCHHHH
T ss_pred HHhcCCCcc--chhh---hccc--cccChhhc--CcccEEEEEeCCCcccCHHHHHHHHHHCCCCeEEEeCCCCCCcccC
Confidence 111111100 0000 1000 01111111 2689999999999999998887777667789999999999999999
Q ss_pred ChhhHHHHHHHHHHhc
Q 024900 230 APHLVNPLVESFVTRH 245 (261)
Q Consensus 230 ~p~~~~~~l~~fl~~~ 245 (261)
+|++|++.|.+|+++.
T Consensus 241 ~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 241 KTKEIAEILQEVADTY 256 (257)
T ss_dssp SHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhc
Confidence 9999999999999753
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=214.26 Aligned_cols=233 Identities=16% Similarity=0.186 Sum_probs=150.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+. ..++++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++|
T Consensus 53 ~~~g~~v~~~d~~G~G~S~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 125 (309)
T 3u1t_A 53 VAAGYRAVAPDLIGMGDSAKPD-------IEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVA 125 (309)
T ss_dssp HHTTCEEEEECCTTSTTSCCCS-------SCCCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEE
T ss_pred HhCCCEEEEEccCCCCCCCCCC-------cccCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEE
Confidence 5689999999999999998753 358999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHH---HHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQ---NLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++++........ ..+ ..+..... ..+........... .........+... ......+++....+.......
T Consensus 126 l~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 199 (309)
T 3u1t_A 126 FMEALVPPALPM-PSY--EAMGPQLGPLFRDLRTADVGEKMVL--DGNFFVETILPEM-GVVRSLSEAEMAAYRAPFPTR 199 (309)
T ss_dssp EEEESCTTTCSB-SCS--GGGHHHHHHHHHHHTSTTHHHHHHT--TTCHHHHTHHHHT-SCSSCCCHHHHHHHHTTCCST
T ss_pred EeccCCCCcccc-ccc--cccchhhhHHHHHHhccchhhhhcc--ccceehhhhcccc-cccccCCHHHHHHHHHhcCCc
Confidence 999764321000 011 01111111 11111101100000 0111111111111 012234455554443332222
Q ss_pred chHHHHHHHHhhcCCC-----------CccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 160 GAADVFLEFICYSGGP-----------LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~-----------~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
........+....... .....+.++++|||+|+|++|.++|.+..+.+.+..++.++..++++||++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 279 (309)
T 3u1t_A 200 QSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGAGTHFLQE 279 (309)
T ss_dssp GGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHH
T ss_pred cccchHHHHHHHhccccccchhhhhhhhhhhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhCCCCEEEEecCCcccchh
Confidence 2222222211110000 00123567899999999999999999887677666677888889999999999
Q ss_pred CChhhHHHHHHHHHHhcCCC
Q 024900 229 EAPHLVNPLVESFVTRHATP 248 (261)
Q Consensus 229 e~p~~~~~~l~~fl~~~~~~ 248 (261)
|+|++|++.|.+||++....
T Consensus 280 ~~p~~~~~~i~~fl~~~~~~ 299 (309)
T 3u1t_A 280 DHPHLIGQGIADWLRRNKPH 299 (309)
T ss_dssp HCHHHHHHHHHHHHHHHCCC
T ss_pred hCHHHHHHHHHHHHHhcchh
Confidence 99999999999999886554
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=213.59 Aligned_cols=215 Identities=13% Similarity=0.134 Sum_probs=132.7
Q ss_pred cC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
|+ .+|+|+++|+||||.|+.+.. ..|+++++++|+.+++++++ .++++||||||||.|++.+|.++|++|++
T Consensus 33 L~~~g~~via~Dl~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~ 106 (264)
T 2wfl_A 33 LESAGHKVTAVDLSAAGINPRRLD------EIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISV 106 (264)
T ss_dssp HHHTTCEEEEECCTTSTTCSCCGG------GCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHCGGGEEE
T ss_pred HHhCCCEEEEeecCCCCCCCCCcc------cccCHHHHHHHHHHHHHHhCCCCCeEEEEeChHHHHHHHHHHhChhhhce
Confidence 53 579999999999999976421 24799999999999999996 58999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhh-hhhhHH--HHH--------hhcChHHHHHHHHhhcCCCCCCcHHHH
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN-TAAGKL--FYK--------MVATSESVRNILCQCYNDTSQVTEELV 149 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (261)
||++++...... . ........+...... ...... ++. ....+.... ..+.... ..+..
T Consensus 107 lvl~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~ 175 (264)
T 2wfl_A 107 AVFMSAMMPDPN---H--SLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMA----LKMFQNC--SVEDL 175 (264)
T ss_dssp EEEESSCCCCTT---S--CTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHHH----HHTSTTS--CHHHH
T ss_pred eEEEeeccCCCC---c--chhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHHH----HHHhcCC--CHHHH
Confidence 999986421100 0 000001111110000 000000 000 000111111 1111110 11111
Q ss_pred ---HHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCC
Q 024900 150 ---EKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226 (261)
Q Consensus 150 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 226 (261)
.....+.. . ... .+.. ....... ...++|||+|+|++|.++|.+..+.+.+..|++++++|+++||++
T Consensus 176 ~~~~~~~~~~~-~-~~~---~~~~--~~~~~~~--~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~ 246 (264)
T 2wfl_A 176 ELAKMLTRPGS-L-FFQ---DLAK--AKKFSTE--RYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMG 246 (264)
T ss_dssp HHHHHHCCCEE-C-CHH---HHTT--SCCCCTT--TGGGSCEEEEEETTCSSSCHHHHHHHHHHHCCSEEEEETTCCSCH
T ss_pred HHHHhccCCCc-c-ccc---cccc--ccccChH--HhCCCCeEEEEeCCcCCCCHHHHHHHHHhCCCceEEEeCCCCCch
Confidence 11111100 0 000 0000 0011111 114689999999999999988877777666789999999999999
Q ss_pred CCCChhhHHHHHHHHHH
Q 024900 227 QDEAPHLVNPLVESFVT 243 (261)
Q Consensus 227 ~~e~p~~~~~~l~~fl~ 243 (261)
++|+|++|++.|.+|++
T Consensus 247 ~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 247 MLSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHSHHHHHHHHHHHHC
T ss_pred hhcCHHHHHHHHHHHhh
Confidence 99999999999999985
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=215.61 Aligned_cols=236 Identities=18% Similarity=0.169 Sum_probs=140.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+... .....|+++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++|
T Consensus 56 l~~~~~v~~~D~~G~G~S~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 133 (306)
T 3r40_A 56 LAERFKVIVADLPGYGWSDMPESD--EQHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLA 133 (306)
T ss_dssp HHTTSEEEEECCTTSTTSCCCCCC--TTCGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred hccCCeEEEeCCCCCCCCCCCCCC--cccCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEE
Confidence 566999999999999999875421 001258999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHH-HHH-Hhhh-hhhhHHHHHhhcChHHHHHHHHhhcCC--CCCCcHHHHHHHhccCC
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRS-FQN-LLRN-TAAGKLFYKMVATSESVRNILCQCYND--TSQVTEELVEKILQPGL 157 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 157 (261)
++++.+......... ...... +.. .... ......... ......+...+...... ....+++.++.+.....
T Consensus 134 l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (306)
T 3r40_A 134 VLDILPTYEYWQRMN---RAYALKIYHWSFLAQPAPLPENLLG-GDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFA 209 (306)
T ss_dssp EESCCCHHHHHHHCS---HHHHHHSTHHHHHTSCTTHHHHHHT-SCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHT
T ss_pred EecCCCCccchhhhh---hhhhhhhHHHHHhhcccchHHHHHc-CCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHc
Confidence 999754322111100 000000 000 0000 000000000 01111222222222222 23344554444332111
Q ss_pred CCchHHHHHHHH-hhcCCCC-----ccccCCCCCCCEEEEecCCCCCCC-chhhhhhccCCCCccEEEcCCCCCCCCCCC
Q 024900 158 ETGAADVFLEFI-CYSGGPL-----PEELLPQVKCPVLIAWGDKDPWEP-IELGRAYGNFDSVEDFIVLPNVGHCPQDEA 230 (261)
Q Consensus 158 ~~~~~~~~~~~~-~~~~~~~-----~~~~l~~i~~Pvlii~G~~D~~~~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 230 (261)
............ ....... ....+.++++|||+|+|++|.+++ ....+.+.+..++.++.++ ++||++++|+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~ 288 (306)
T 3r40_A 210 DPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEA 288 (306)
T ss_dssp SHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHS
T ss_pred cCCCcchhhHHHHhcccccchhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhC
Confidence 111111111111 0000000 001468899999999999999988 4445556666677898888 7899999999
Q ss_pred hhhHHHHHHHHHHhc
Q 024900 231 PHLVNPLVESFVTRH 245 (261)
Q Consensus 231 p~~~~~~l~~fl~~~ 245 (261)
|+++++.|.+||++.
T Consensus 289 p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 289 PDQTAEALVRFFSAA 303 (306)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHhc
Confidence 999999999999874
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-30 Score=212.37 Aligned_cols=224 Identities=17% Similarity=0.184 Sum_probs=135.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-cCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
..+|+|+++|+||||.|+.+.. ..|+++++++|+.++++.+ +.++++|+||||||.||+.+|+.+|++|+++|
T Consensus 53 ~~g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 126 (293)
T 1mtz_A 53 KEGITVLFYDQFGCGRSEEPDQ------SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLI 126 (293)
T ss_dssp GGTEEEEEECCTTSTTSCCCCG------GGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEE
T ss_pred hcCcEEEEecCCCCccCCCCCC------CcccHHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEE
Confidence 4569999999999999986531 3479999999999999999 99999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhh---hhHHHH-HhhcChHH---HHHHHHhhcCCCCCCcHHHHHHHhcc
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA---AGKLFY-KMVATSES---VRNILCQCYNDTSQVTEELVEKILQP 155 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (261)
++++......... . ...+...+.... ...... .....+.. ...+............+.....+...
T Consensus 127 l~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (293)
T 1mtz_A 127 VSGGLSSVPLTVK------E-MNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYA 199 (293)
T ss_dssp EESCCSBHHHHHH------H-HHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHH
T ss_pred ecCCccChHHHHH------H-HHHHHHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhh
Confidence 9987543210000 0 000000000000 000000 00000100 00011111000001111111110000
Q ss_pred CCCCchHHHHHHHHh---h---c--CCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCC
Q 024900 156 GLETGAADVFLEFIC---Y---S--GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 156 ~~~~~~~~~~~~~~~---~---~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 227 (261)
... ..+..+.. + . ......+.+.+|++|||+|+|++| .++++.++.+.+..|++++++++++||+++
T Consensus 200 -~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 274 (293)
T 1mtz_A 200 -ERR---NVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYD-EVTPNVARVIHEKIAGSELHVFRDCSHLTM 274 (293)
T ss_dssp -HHS---SHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTC-SSCHHHHHHHHHHSTTCEEEEETTCCSCHH
T ss_pred -ccc---hhhhhccCcceecccccccCCChhhhhccCCCCEEEEeeCCC-CCCHHHHHHHHHhCCCceEEEeCCCCCCcc
Confidence 000 00000000 0 0 000112356789999999999999 566666666766667899999999999999
Q ss_pred CCChhhHHHHHHHHHHhc
Q 024900 228 DEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 228 ~e~p~~~~~~l~~fl~~~ 245 (261)
+|+|++|++.|.+|++++
T Consensus 275 ~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 275 WEDREGYNKLLSDFILKH 292 (293)
T ss_dssp HHSHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHHhc
Confidence 999999999999999764
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-30 Score=212.39 Aligned_cols=232 Identities=19% Similarity=0.249 Sum_probs=149.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+. ..++++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++
T Consensus 54 ~l~~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~l 126 (299)
T 3g9x_A 54 HVAPSHRCIAPDLIGMGKSDKPD-------LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126 (299)
T ss_dssp HHTTTSCEEEECCTTSTTSCCCC-------CCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEE
T ss_pred HHccCCEEEeeCCCCCCCCCCCC-------CcccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEE
Confidence 36789999999999999998753 25899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++.......... ..........+........... .........+.... .....++....+.........
T Consensus 127 vl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 198 (299)
T 3g9x_A 127 ACMEFIRPFPTWDEW----PEFARETFQAFRTADVGRELII--DQNAFIEGALPKCV--VRPLTEVEMDHYREPFLKPVD 198 (299)
T ss_dssp EEEEECCCBSSGGGS----CGGGHHHHHHHTSSSHHHHHHT--TSCHHHHTHHHHTC--SSCCCHHHHHHHHGGGSSGGG
T ss_pred EEecCCcchhhhhhc----chHHHHHHHHHcCCCcchhhhc--cchhhHHHhhhhhh--ccCCCHHHHHHHHHHhccccc
Confidence 999954322111110 0111111111111111111100 01111111111111 122334444433332222211
Q ss_pred HHHHHHHHhhcCCC-----------CccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCC
Q 024900 162 ADVFLEFICYSGGP-----------LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA 230 (261)
Q Consensus 162 ~~~~~~~~~~~~~~-----------~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 230 (261)
......+....... .....+.+|++|||+|+|++|.++|.+..+.+.+..+++++++++++||++++|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 278 (299)
T 3g9x_A 199 REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDN 278 (299)
T ss_dssp GHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHHHC
T ss_pred cchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhCCCCeEEEeCCCCCcchhcC
Confidence 11111111110000 0012357889999999999999999988877777778899999999999999999
Q ss_pred hhhHHHHHHHHHHhcCCC
Q 024900 231 PHLVNPLVESFVTRHATP 248 (261)
Q Consensus 231 p~~~~~~l~~fl~~~~~~ 248 (261)
|++|++.|.+|+.+...+
T Consensus 279 p~~~~~~i~~~~~~~~~~ 296 (299)
T 3g9x_A 279 PDLIGSEIARWLPALHHH 296 (299)
T ss_dssp HHHHHHHHHHHSGGGCCC
T ss_pred HHHHHHHHHHHHhhhhhc
Confidence 999999999999876554
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-30 Score=214.00 Aligned_cols=220 Identities=15% Similarity=0.171 Sum_probs=132.5
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+.. ...|+++++++|+.+++++++.++++|+||||||.||+.+|+++|++|++|
T Consensus 51 ~L~~~~~vi~~Dl~G~G~S~~~~~-----~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 125 (285)
T 3bwx_A 51 RLAGDWRVLCPEMRGRGDSDYAKD-----PMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAA 125 (285)
T ss_dssp HHBBTBCEEEECCTTBTTSCCCSS-----GGGCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HhhcCCEEEeecCCCCCCCCCCCC-----ccccCHHHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEE
Confidence 367799999999999999986421 135899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhc-CCCCCCcHHHHHH----HhccC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY-NDTSQVTEELVEK----ILQPG 156 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~ 156 (261)
|++++.+... ......+......... ..........+.... ........+.+.. .....
T Consensus 126 vl~~~~~~~~---------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (285)
T 3bwx_A 126 VLNDVGPEVS---------PEGLERIRGYVGQGRN-------FETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLG 189 (285)
T ss_dssp EEESCCSSCC---------HHHHHHHHHHTTCCCE-------ESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEEC
T ss_pred EEecCCcccC---------cchhHHHHHHhcCCcc-------cccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeC
Confidence 9987542210 0000000000000000 000000000000000 0000111111111 11000
Q ss_pred CCC----chHHHHH-HHHhh--c-CCCCccccCCCC-CCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCC
Q 024900 157 LET----GAADVFL-EFICY--S-GGPLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 157 ~~~----~~~~~~~-~~~~~--~-~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 227 (261)
... ....... .+... . ........+.++ ++|||+|+|++|.+++++..+.+.+. +++++++++++||+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~ 268 (285)
T 3bwx_A 190 SSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMASR-PGVELVTLPRIGHAPT 268 (285)
T ss_dssp TTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEEETTCSSSCHHHHHHHHTS-TTEEEEEETTCCSCCC
T ss_pred CCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEEeCCCCccCHHHHHHHHhC-CCcEEEEeCCCCccch
Confidence 000 0000000 00000 0 000000112334 79999999999999998887778777 8899999999999999
Q ss_pred CCChhhHHHHHHHHHHh
Q 024900 228 DEAPHLVNPLVESFVTR 244 (261)
Q Consensus 228 ~e~p~~~~~~l~~fl~~ 244 (261)
+|+|+.++ .|.+||++
T Consensus 269 ~e~p~~~~-~i~~fl~~ 284 (285)
T 3bwx_A 269 LDEPESIA-AIGRLLER 284 (285)
T ss_dssp SCSHHHHH-HHHHHHTT
T ss_pred hhCchHHH-HHHHHHHh
Confidence 99999885 78999964
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=215.23 Aligned_cols=236 Identities=18% Similarity=0.240 Sum_probs=138.0
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+++... .....|+++.+++|+.++++.++.++++|+||||||.||+.+|..+|++|+++
T Consensus 47 ~l~~~~~vi~~Dl~G~G~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~l 124 (291)
T 3qyj_A 47 LLANNFTVVATDLRGYGDSSRPASV--PHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKL 124 (291)
T ss_dssp HHTTTSEEEEECCTTSTTSCCCCCC--GGGGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred HHhCCCEEEEEcCCCCCCCCCCCCC--ccccccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEE
Confidence 3678999999999999999875321 00123899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHH-HHH-hhh-hhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSF-QNL-LRN-TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
|++++.+........ ...+...+ ... ... ......... .......+..+..........+++.+..+......
T Consensus 125 vl~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (291)
T 3qyj_A 125 ALLDIAPTHKMYRTT---DQEFATAYYHWFFLIQPDNLPETLIG-ANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQ 200 (291)
T ss_dssp EEESCCCHHHHHHTC---CHHHHHHTTHHHHTTCSTTHHHHHHH-TCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTS
T ss_pred EEECCCCcchhhhcc---hhhhhHHHHHHHHhccCCCchHHHHc-CCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcC
Confidence 999875432111000 00000000 000 000 000000000 00011112222221112223344444444322111
Q ss_pred CchHHHHHH-HHhhcC---CCCccccCCCCCCCEEEEecCCCCCCCc-hhhhhhccCCCCccEEEcCCCCCCCCCCChhh
Q 024900 159 TGAADVFLE-FICYSG---GPLPEELLPQVKCPVLIAWGDKDPWEPI-ELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 159 ~~~~~~~~~-~~~~~~---~~~~~~~l~~i~~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
+........ +..... .....+.+.+|+||||+|+|++|...+. .......+..++.+...++ +||++++|+|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~E~P~~ 279 (291)
T 3qyj_A 201 PAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLP-CGHFLPEEAPEE 279 (291)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCEEEEEETTSSHHHHSCHHHHHHTTBSSEEEEEES-SSSCHHHHSHHH
T ss_pred CCcchhHHHHHHcccccchhhcchhcCCccccceEEEecccccccchhhHHHHHHhhcCCcceeecc-CCCCchhhCHHH
Confidence 111111111 111000 0001234678999999999999975332 2223334444566777775 899999999999
Q ss_pred HHHHHHHHHHh
Q 024900 234 VNPLVESFVTR 244 (261)
Q Consensus 234 ~~~~l~~fl~~ 244 (261)
|++.|.+||.+
T Consensus 280 v~~~i~~fL~~ 290 (291)
T 3qyj_A 280 TYQAIYNFLTH 290 (291)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999999964
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=205.16 Aligned_cols=225 Identities=17% Similarity=0.186 Sum_probs=142.0
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+... ....++++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++
T Consensus 42 ~l~~g~~v~~~D~~G~G~S~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~l 118 (269)
T 4dnp_A 42 FFLRDYRVVLYDLVCAGSVNPDFFD---FRRYTTLDPYVDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKL 118 (269)
T ss_dssp GGTTTCEEEEECCTTSTTSCGGGCC---TTTCSSSHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred HHhCCcEEEEEcCCCCCCCCCCCCC---ccccCcHHHHHHHHHHHHHhcCCCeEEEEccCHHHHHHHHHHHhCcHhhcee
Confidence 4677999999999999999752211 1134589999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++.+....... +........+.......... .......+....+.. ..++..+.+.........
T Consensus 119 vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 185 (269)
T 4dnp_A 119 ILIGASPRFLNDED--YHGGFEQGEIEKVFSAMEAN--------YEAWVNGFAPLAVGA---DVPAAVREFSRTLFNMRP 185 (269)
T ss_dssp EEESCCSCCBCBTT--BCCSBCHHHHHHHHHHHHHC--------HHHHHHHHHHHHHCS---SCHHHHHHHHHHHHHSCH
T ss_pred EEeCCCCCCCChHH--hccccchHHHHHHHHhcccc--------HHHHHHHhhhhhccC---CChhHHHHHHHHHHccCc
Confidence 99998654321111 11000011111111100000 000000011111111 112222222111000000
Q ss_pred HHHHHHH-HhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC-ccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 162 ADVFLEF-ICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 162 ~~~~~~~-~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
...... ...... ...+.++++++||++|+|++|.++|.+..+.+.+..++ .++++++++||+++.|+|+++++.|.
T Consensus 186 -~~~~~~~~~~~~~-~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 263 (269)
T 4dnp_A 186 -DITLFVSRTVFNS-DMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELR 263 (269)
T ss_dssp -HHHHHHHHHHHTC-CCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSSCEEEEEEEEESSCHHHHCHHHHHHHHH
T ss_pred -chhhhHhhhhcch-hhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCCCceEEEeCCCCCCccccCHHHHHHHHH
Confidence 111111 111111 22355788999999999999999999887777666565 79999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+||++
T Consensus 264 ~fl~~ 268 (269)
T 4dnp_A 264 RALSH 268 (269)
T ss_dssp HHHC-
T ss_pred HHHhh
Confidence 99975
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=205.68 Aligned_cols=230 Identities=17% Similarity=0.193 Sum_probs=146.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.|+++|+|+++|+||||.|+.+... ....++++++++|+.++++.++. ++++++||||||.+++.+|..+|++|++
T Consensus 50 ~l~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~ 126 (297)
T 2qvb_A 50 HLEGLGRLVACDLIGMGASDKLSPS---GPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQG 126 (297)
T ss_dssp GGTTSSEEEEECCTTSTTSCCCSSC---STTSSCHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEE
T ss_pred HHhhcCeEEEEcCCCCCCCCCCCCc---cccCcCHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhhe
Confidence 4778899999999999999865310 01238999999999999999999 9999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC-
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET- 159 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (261)
+|++++..........+ ......+.. +.... ....+. .....+..++... .....+++.+..+.......
T Consensus 127 lvl~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~-~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 197 (297)
T 2qvb_A 127 IAFMEAIVTPMTWADWP---PAVRGVFQG-FRSPQ-GEPMAL--EHNIFVERVLPGA--ILRQLSDEEMNHYRRPFVNGG 197 (297)
T ss_dssp EEEEEECCSCBCGGGSC---GGGHHHHHH-HTSTT-HHHHHH--TTCHHHHTHHHHT--CSSCCCHHHHHHHHGGGCSSS
T ss_pred eeEeccccCCccCCCCC---hHHHHHHHH-Hhccc-chhhhc--cccHHHHHHHhcc--ccccCCHHHHHHHHHHhcCcc
Confidence 99999864321110100 111111111 11110 100000 0111111111111 11223344444433322111
Q ss_pred chHHHHHHHHhhcCC-----------CCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 160 GAADVFLEFICYSGG-----------PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
........+...... ......++++++|||+|+|++|.++|.+..+.+.+..++ +++++ ++||++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~ 275 (297)
T 2qvb_A 198 EDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIITGRIRDYVRSWPNQ-TEITV-PGVHFVQE 275 (297)
T ss_dssp GGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHTSSSE-EEEEE-EESSCGGG
T ss_pred cchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEEEEecCCCCcCCHHHHHHHHHHcCC-eEEEe-cCccchhh
Confidence 111111111110000 001234567899999999999999999888888877777 99999 99999999
Q ss_pred CChhhHHHHHHHHHHhc
Q 024900 229 EAPHLVNPLVESFVTRH 245 (261)
Q Consensus 229 e~p~~~~~~l~~fl~~~ 245 (261)
|+|+++++.|.+|+++.
T Consensus 276 ~~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 276 DSPEEIGAAIAQFVRRL 292 (297)
T ss_dssp TCHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHH
Confidence 99999999999999875
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-29 Score=206.19 Aligned_cols=232 Identities=18% Similarity=0.186 Sum_probs=147.4
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.|+++|+|+++|+||||.|+.+... ....|+++++++|+.++++.++. ++++|+||||||.+++.+|..+|++|++
T Consensus 51 ~L~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~ 127 (302)
T 1mj5_A 51 HCAGLGRLIACDLIGMGDSDKLDPS---GPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQG 127 (302)
T ss_dssp GGTTSSEEEEECCTTSTTSCCCSSC---STTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEE
T ss_pred HhccCCeEEEEcCCCCCCCCCCCCC---CcccccHHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhh
Confidence 4778899999999999999865310 01238999999999999999999 9999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC-
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET- 159 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (261)
+|++++.......... .......+.. +.... ...... .........+.... ....+++.+..+.......
T Consensus 128 lvl~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~-~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 198 (302)
T 1mj5_A 128 IAYMEAIAMPIEWADF---PEQDRDLFQA-FRSQA-GEELVL--QDNVFVEQVLPGLI--LRPLSEAEMAAYREPFLAAG 198 (302)
T ss_dssp EEEEEECCSCBCGGGS---CGGGHHHHHH-HHSTT-HHHHHT--TTCHHHHTHHHHTS--SSCCCHHHHHHHHGGGCSSS
T ss_pred eeeecccCCchhhhhh---hHHHHHHHHH-Hhccc-hhhhhc--ChHHHHHHHHHhcC--cccCCHHHHHHHHHHhhccc
Confidence 9999976432111010 0111111111 11110 100000 00111111111111 1223344443333222111
Q ss_pred chHHHHHHHHhhcCC-----------CCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 160 GAADVFLEFICYSGG-----------PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
.....+..+...... ......+.++++|||+|+|++|.++|++..+.+.+..++ +++++ ++||++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~ 276 (302)
T 1mj5_A 199 EARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQ-TEITV-AGAHFIQE 276 (302)
T ss_dssp GGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSHHHHHHHTTCSSE-EEEEE-EESSCGGG
T ss_pred ccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCCeEEEEeCCCCCCChHHHHHHHHhcCC-ceEEe-cCcCcccc
Confidence 111111111100000 001234678999999999999999999888888777777 99999 99999999
Q ss_pred CChhhHHHHHHHHHHhcCC
Q 024900 229 EAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 229 e~p~~~~~~l~~fl~~~~~ 247 (261)
|+|+++++.|.+|+++...
T Consensus 277 e~p~~~~~~i~~fl~~~~~ 295 (302)
T 1mj5_A 277 DSPDEIGAAIAAFVRRLRP 295 (302)
T ss_dssp TCHHHHHHHHHHHHHHHSC
T ss_pred cCHHHHHHHHHHHHHhhcc
Confidence 9999999999999987544
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=211.86 Aligned_cols=228 Identities=15% Similarity=0.261 Sum_probs=133.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
.+|+||++|+||||.|+.+.... ...|+++++++|+.+++++++ .++++||||||||.||+.+|+.+|++|++||
T Consensus 57 ~g~~via~Dl~G~G~S~~~~~~~---~~~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lv 133 (328)
T 2cjp_A 57 RGYRAVAPDLRGYGDTTGAPLND---PSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALV 133 (328)
T ss_dssp TTCEEEEECCTTSTTCBCCCTTC---GGGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred CCcEEEEECCCCCCCCCCcCcCC---cccccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEE
Confidence 57999999999999998651000 135899999999999999999 9999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhh---------hhhhhHHHHHhhcChHHHHHHHHhhcCC-------------
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLR---------NTAAGKLFYKMVATSESVRNILCQCYND------------- 140 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 140 (261)
+++++.... ... ... ...+..... ........+........+..++...-.+
T Consensus 134 l~~~~~~~~----~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (328)
T 2cjp_A 134 NLSVHFSKR----NPK-MNV-VEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAI 207 (328)
T ss_dssp EESCCCCCC----CSS-CCH-HHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTS
T ss_pred EEccCCCcc----ccc-CCh-HHHHHhhcccchHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhc
Confidence 998653210 000 000 011110000 0000000000000001111111000000
Q ss_pred -------CCCCcHHHHHHHhc----cCCCCchHHHHHHHH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchh-----
Q 024900 141 -------TSQVTEELVEKILQ----PGLETGAADVFLEFI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL----- 203 (261)
Q Consensus 141 -------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~----- 203 (261)
...+.++....+.. .+.. .....+..+. ... ......+.+|+||||+|+|++|.++|++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~ 284 (328)
T 2cjp_A 208 PDAPVALSSWLSEEELDYYANKFEQTGFT-GAVNYYRALPINWE--LTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYI 284 (328)
T ss_dssp CCCCGGGGTTSCHHHHHHHHHHHHHHCSH-HHHHHHHTHHHHHH--HTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHH
T ss_pred ccccccCcCCCCHHHHHHHHHHhcccCCc-chHHHHHhcccchh--hhhhccCCccCCCEEEEEeCCcccccCcchhhhh
Confidence 00011111111100 0000 0000000000 000 00011367899999999999999988642
Q ss_pred -hhhhccCCCCc-cEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 204 -GRAYGNFDSVE-DFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 204 -~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
++.+.+..|++ ++++|+++||++++|+|++|++.|.+|+++
T Consensus 285 ~~~~~~~~~p~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 285 HNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIYDFIQK 327 (328)
T ss_dssp HHSHHHHHSTTBCCCEEETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred hhhhHHHHhcCCeeEEEcCCCCCCcchhCHHHHHHHHHHHHHh
Confidence 13455556778 899999999999999999999999999964
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=204.22 Aligned_cols=218 Identities=14% Similarity=0.201 Sum_probs=136.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|....+.. ...|+++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++|
T Consensus 64 L~~~~~vi~~D~~G~G~s~~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lv 140 (286)
T 2qmq_A 64 IIQNFVRVHVDAPGMEEGAPVFPLG---YQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLV 140 (286)
T ss_dssp HHTTSCEEEEECTTTSTTCCCCCTT---CCCCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HhcCCCEEEecCCCCCCCCCCCCCC---CCccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEE
Confidence 5678999999999999986542211 1125999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhh--hhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT--AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
++++.+... .+........... .....+.......... .......+.....+.. .....
T Consensus 141 l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~ 201 (286)
T 2qmq_A 141 LINIDPNAK----------GWMDWAAHKLTGLTSSIPDMILGHLFSQEEL--------SGNSELIQKYRGIIQH-APNLE 201 (286)
T ss_dssp EESCCCCCC----------CHHHHHHHHHHHTTSCHHHHHHHHHSCHHHH--------HTTCHHHHHHHHHHHT-CTTHH
T ss_pred EECCCCccc----------chhhhhhhhhccccccchHHHHHHHhcCCCC--------CcchHHHHHHHHHHHh-cCCcc
Confidence 999854211 0111111100000 0000000000110000 0000000111111111 11111
Q ss_pred hHHHHHHHHhh-cCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC-CccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 161 AADVFLEFICY-SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 161 ~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
....+...... .........+.++++|||+|+|++|.++| ...+.+.+..+ ++++++++++||++++|+|++|++.|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 280 (286)
T 2qmq_A 202 NIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-AVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAF 280 (286)
T ss_dssp HHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-HHHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHH
T ss_pred hHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-HHHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHH
Confidence 11222221111 11111134578899999999999999988 44555666655 78999999999999999999999999
Q ss_pred HHHHH
Q 024900 239 ESFVT 243 (261)
Q Consensus 239 ~~fl~ 243 (261)
.+||+
T Consensus 281 ~~fl~ 285 (286)
T 2qmq_A 281 KYFLQ 285 (286)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99985
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-29 Score=202.10 Aligned_cols=213 Identities=18% Similarity=0.196 Sum_probs=139.1
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+. .++++++++|+.++++.++ ++++++||||||.+++.+|..+| +|+++|
T Consensus 46 l~~~~~vi~~d~~G~G~S~~~~--------~~~~~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lv 115 (262)
T 3r0v_A 46 LAPHFTVICYDRRGRGDSGDTP--------PYAVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLA 115 (262)
T ss_dssp HTTTSEEEEECCTTSTTCCCCS--------SCCHHHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEE
T ss_pred HhcCcEEEEEecCCCcCCCCCC--------CCCHHHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEE
Confidence 5689999999999999998652 4799999999999999999 99999999999999999999999 999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC---
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET--- 159 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 159 (261)
++++......... .....+...+...+..... ......+.... ...+++..+.+.......
T Consensus 116 l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 179 (262)
T 3r0v_A 116 VFEPPYAVDDSRP--PVPPDYQTRLDALLAEGRR----------GDAVTYFMTEG----VGVPPDLVAQMQQAPMWPGME 179 (262)
T ss_dssp EECCCCCCSTTSC--CCCTTHHHHHHHHHHTTCH----------HHHHHHHHHHT----SCCCHHHHHHHHTSTTHHHHH
T ss_pred EEcCCcccccccc--hhhhHHHHHHHHHhhccch----------hhHHHHHhhcc----cCCCHHHHHHHHhhhcccchH
Confidence 9997654321110 0001222222222211110 00111111110 112233333322111000
Q ss_pred -chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 160 -GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
...................+.++++++|||+|+|++|.++|.+..+.+.+..+++++++++++|| +++|+++++.|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH---~~~p~~~~~~i 256 (262)
T 3r0v_A 180 AVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIPNARYVTLENQTH---TVAPDAIAPVL 256 (262)
T ss_dssp HTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHHHSTTEEEEECCCSSS---SCCHHHHHHHH
T ss_pred HHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHHhCCCCeEEEecCCCc---ccCHHHHHHHH
Confidence 00000001111111122235678899999999999999999888877777777889999999999 47999999999
Q ss_pred HHHHHh
Q 024900 239 ESFVTR 244 (261)
Q Consensus 239 ~~fl~~ 244 (261)
.+||++
T Consensus 257 ~~fl~~ 262 (262)
T 3r0v_A 257 VEFFTR 262 (262)
T ss_dssp HHHHC-
T ss_pred HHHHhC
Confidence 999853
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=204.12 Aligned_cols=212 Identities=12% Similarity=0.027 Sum_probs=134.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-cccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~ 80 (261)
.|+++|+|+++|+||||.|+.+. ..|+++++++|+.+++++++.++++|+||||||.+++.+|..+ |++|++
T Consensus 43 ~L~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~ 115 (264)
T 3ibt_A 43 LLARDFHVICPDWRGHDAKQTDS-------GDFDSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPK 115 (264)
T ss_dssp HHTTTSEEEEECCTTCSTTCCCC-------SCCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCE
T ss_pred HHHhcCcEEEEccccCCCCCCCc-------cccCHHHHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhhe
Confidence 36778999999999999998752 4589999999999999999999999999999999999999999 999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++.. .. ...+...+........... .........+.. ...++..+.+........
T Consensus 116 lvl~~~~~-~~--------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 174 (264)
T 3ibt_A 116 TIIIDWLL-QP--------HPGFWQQLAEGQHPTEYVA----------GRQSFFDEWAET--TDNADVLNHLRNEMPWFH 174 (264)
T ss_dssp EEEESCCS-SC--------CHHHHHHHHHTTCTTTHHH----------HHHHHHHHHHTT--CCCHHHHHHHHHTGGGSC
T ss_pred EEEecCCC-Cc--------ChhhcchhhcccChhhHHH----------HHHHHHHHhccc--CCcHHHHHHHHHhhhhcc
Confidence 99999764 10 0111111111110000000 000001111110 011222222211110110
Q ss_pred h---H---HHHHHHHhhcCCCCccccCCCCCCCEEEEec--CCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 161 A---A---DVFLEFICYSGGPLPEELLPQVKCPVLIAWG--DKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 161 ~---~---~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G--~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
. . .......... ....+.+.+|++||++|+| +.|...+.+..+.+.+..+++++++++++||++++|+|+
T Consensus 175 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 252 (264)
T 3ibt_A 175 GEMWQRACREIEANYRTW--GSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPSLENPV 252 (264)
T ss_dssp HHHHHHHHHHHHHHHHHH--SSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHCHH
T ss_pred chhHHHHHHHhccchhhc--cchhhcccccCCCeEEEEecCCccchhhHHHHHHHHHhCCCceEEEcCCCCCcchhhCHH
Confidence 0 0 0000000000 0112457889999999965 444444455555666667788999999999999999999
Q ss_pred hHHHHHHHHHH
Q 024900 233 LVNPLVESFVT 243 (261)
Q Consensus 233 ~~~~~l~~fl~ 243 (261)
+|++.|.+||+
T Consensus 253 ~~~~~i~~fl~ 263 (264)
T 3ibt_A 253 AVAQAIREFLQ 263 (264)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999999985
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-29 Score=203.49 Aligned_cols=214 Identities=14% Similarity=0.206 Sum_probs=123.3
Q ss_pred cC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCC--eEEEEcChhHHHHHH---HHhhCcc
Q 024900 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ--AFFICNSIGGLVGLQ---AAVMEPE 76 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~--~~lvGhS~Gg~va~~---~a~~~p~ 76 (261)
|+ ++|+|+++|+||||.|+.+. .++++++++|+.+++++++.++ ++||||||||.|++. +|..+|+
T Consensus 39 L~~~~~~vi~~Dl~GhG~S~~~~--------~~~~~~~a~~l~~~l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~ 110 (264)
T 1r3d_A 39 LARTQCAALTLDLPGHGTNPERH--------CDNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRL 110 (264)
T ss_dssp HTTSSCEEEEECCTTCSSCC---------------CHHHHHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTS
T ss_pred hcccCceEEEecCCCCCCCCCCC--------ccCHHHHHHHHHHHHHHhCcCCCceEEEEECHhHHHHHHHHHHHhhCcc
Confidence 56 78999999999999998642 2688999999999999999887 999999999999999 8889999
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHh-hcCCCCCCcHHHHHHHhcc
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDTSQVTEELVEKILQP 155 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 155 (261)
+|++||++++.+... ..... .............+ ............... .+. ..+++....+...
T Consensus 111 ~v~~lvl~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 176 (264)
T 1r3d_A 111 NLRGAIIEGGHFGLQ---------ENEEK-AARWQHDQQWAQRF-SQQPIEHVLSDWYQQAVFS---SLNHEQRQTLIAQ 176 (264)
T ss_dssp EEEEEEEESCCCCCC---------SHHHH-HHHHHHHHHHHHHH-HHSCHHHHHHHHTTSGGGT---TCCHHHHHHHHHH
T ss_pred ccceEEEecCCCCCC---------Chhhh-hhhhcccHHHHHHh-ccccHHHHHHHHhhhhhhh---ccCHHHHHHHHHH
Confidence 999999988643210 00000 00000000000000 000000000000000 011 1122221111110
Q ss_pred CCCCchHHHHHHHHh---hcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 156 GLETGAADVFLEFIC---YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 156 ~~~~~~~~~~~~~~~---~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
...... .....+.. ........+.+.+|++|||+|+|++|..++ ...+.+ + .++++++++||++++|+|+
T Consensus 177 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~----~-~~~~~i~~~gH~~~~e~p~ 249 (264)
T 1r3d_A 177 RSANLG-SSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-QLAESS----G-LSYSQVAQAGHNVHHEQPQ 249 (264)
T ss_dssp HTTSCH-HHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-HHHHHH----C-SEEEEETTCCSCHHHHCHH
T ss_pred Hhhcch-HHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-HHHHHh----C-CcEEEcCCCCCchhhcCHH
Confidence 000011 11111111 000111223467899999999999997543 222222 2 5789999999999999999
Q ss_pred hHHHHHHHHHHhc
Q 024900 233 LVNPLVESFVTRH 245 (261)
Q Consensus 233 ~~~~~l~~fl~~~ 245 (261)
+|++.|.+|+++.
T Consensus 250 ~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 250 AFAKIVQAMIHSI 262 (264)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999764
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=199.79 Aligned_cols=219 Identities=14% Similarity=0.097 Sum_probs=138.3
Q ss_pred cCC--CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hcCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAK--SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~--~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~-l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
|++ +|+|+++|+||||.|+.+. . ++++++++|+.+++++ ++.++++|+||||||.+++.+|..+|++|+
T Consensus 44 l~~~~g~~v~~~d~~G~G~s~~~~-------~-~~~~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~ 115 (272)
T 3fsg_A 44 LSNVGQYQRIYLDLPGMGNSDPIS-------P-STSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTL 115 (272)
T ss_dssp STTSTTSEEEEECCTTSTTCCCCS-------S-CSHHHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEE
T ss_pred HhccCceEEEEecCCCCCCCCCCC-------C-CCHHHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhh
Confidence 555 8999999999999998653 2 7999999999999999 788999999999999999999999999999
Q ss_pred ceEEeecchhhhhhcc-CCCCCchhhHHHHHHhhhhhhhHHHHHh--hcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 80 GMILLNISLRMLHIKK-QPWYGRPLIRSFQNLLRNTAAGKLFYKM--VATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
++|++++......... .+.........+...+.... ...+... ...+.....+... ......
T Consensus 116 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--- 180 (272)
T 3fsg_A 116 GVFLTCPVITADHSKRLTGKHINILEEDINPVENKEY-FADFLSMNVIINNQAWHDYQNL-----------IIPGLQ--- 180 (272)
T ss_dssp EEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGG-HHHHHHHCSEESHHHHHHHHHH-----------THHHHH---
T ss_pred eeEEECcccccCccccccccchhhhhhhhhcccCHHH-HHHHHHHhccCCCchhHHHHHH-----------hhhhhh---
Confidence 9999997643211100 00000000000000000000 0000000 0011111000000 000000
Q ss_pred CCCchHHHHHHHHhhcCCCCc-cccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 157 LETGAADVFLEFICYSGGPLP-EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
.........+......... ...+..+++|||+|+|++|.++|.+..+.+.+..+++++++++++||+++.|+|++++
T Consensus 181 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 258 (272)
T 3fsg_A 181 --KEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENGEIVLLNRTGHNLMIDQREAVG 258 (272)
T ss_dssp --HCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCTTEEEEEESSCCSSHHHHTHHHHH
T ss_pred --hccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcCCCeEEEecCCCCCchhcCHHHHH
Confidence 0000000011000000010 1145789999999999999999998888887777889999999999999999999999
Q ss_pred HHHHHHHHhcC
Q 024900 236 PLVESFVTRHA 246 (261)
Q Consensus 236 ~~l~~fl~~~~ 246 (261)
+.|.+|+++..
T Consensus 259 ~~i~~fl~~~~ 269 (272)
T 3fsg_A 259 FHFDLFLDELN 269 (272)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999998743
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=204.33 Aligned_cols=223 Identities=16% Similarity=0.179 Sum_probs=139.1
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
++++|+|+++|+||||.|+.+ ..++++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++|
T Consensus 68 ~~~g~~vi~~D~~G~G~s~~~--------~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 139 (293)
T 3hss_A 68 LAAGYRCITFDNRGIGATENA--------EGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAV 139 (293)
T ss_dssp HHTTEEEEEECCTTSGGGTTC--------CSCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred hhcCCeEEEEccCCCCCCCCc--------ccCCHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhh
Confidence 357899999999999999754 247999999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhh-hhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT-AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
++++........ .............. ......... .............. ......+......... . .
T Consensus 140 l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~-~ 207 (293)
T 3hss_A 140 LMATRGRLDRAR------QFFNKAEAELYDSGVQLPPTYDAR---ARLLENFSRKTLND-DVAVGDWIAMFSMWPI-K-S 207 (293)
T ss_dssp EESCCSSCCHHH------HHHHHHHHHHHHHTCCCCHHHHHH---HHHHHHSCHHHHTC-HHHHHHHHHHHHHSCC-C-C
T ss_pred eecccccCChhh------hHHHHHHHHHHhhcccchhhHHHH---HHHhhhcccccccc-cccHHHHHHHHhhccc-c-c
Confidence 999764321000 00000000000000 000000000 00000000000000 0000011111100000 0 0
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHH
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 241 (261)
...+.............+.++++++|||+|+|++|.++|++..+.+.+..+++++++++++||++++|+|+++++.|.+|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 287 (293)
T 3hss_A 208 TPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFERPEAVNTAMLKF 287 (293)
T ss_dssp CHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCCTTHHHHSHHHHHHHHHHH
T ss_pred cHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCceEEEeCCCcchHhhhCHHHHHHHHHHH
Confidence 01111111111111122457889999999999999999998877777667789999999999999999999999999999
Q ss_pred HHhc
Q 024900 242 VTRH 245 (261)
Q Consensus 242 l~~~ 245 (261)
|++.
T Consensus 288 l~~~ 291 (293)
T 3hss_A 288 FASV 291 (293)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 9874
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-28 Score=197.27 Aligned_cols=197 Identities=13% Similarity=0.139 Sum_probs=125.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN---DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~---~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.+|+|+++|+||||.|..+. ..|+++++++|+. +++++++.++++|+||||||.|++.+|.++| |+++
T Consensus 42 ~g~~vi~~D~~GhG~s~~~~-------~~~~~~~~~~d~~~~~~~l~~~~~~~~~lvG~SmGG~ia~~~a~~~p--v~~l 112 (247)
T 1tqh_A 42 KGYTCHAPIYKGHGVPPEEL-------VHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGI 112 (247)
T ss_dssp TTCEEEECCCTTSSSCHHHH-------TTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSC--CSCE
T ss_pred CCCEEEecccCCCCCCHHHh-------cCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEeCHHHHHHHHHHHhCC--CCeE
Confidence 57999999999999774321 2368888877765 4677778899999999999999999999999 9999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHh-hcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM-VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
|+++++.... ........+.... ..+... ...++.... ....+... ...
T Consensus 113 vl~~~~~~~~-------~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~---------------~~~~~~~~--~~~ 162 (247)
T 1tqh_A 113 VTMCAPMYIK-------SEETMYEGVLEYA------REYKKREGKSEEQIEQ---------------EMEKFKQT--PMK 162 (247)
T ss_dssp EEESCCSSCC-------CHHHHHHHHHHHH------HHHHHHHTCCHHHHHH---------------HHHHHTTS--CCT
T ss_pred EEEcceeecC-------cchhhhHHHHHHH------HHhhcccccchHHHHh---------------hhhcccCC--CHH
Confidence 9887642210 0000000000000 000000 001111110 00111000 011
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC--ccEEEcCCCCCCCCCCC-hhhHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV--EDFIVLPNVGHCPQDEA-PHLVNPL 237 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~-p~~~~~~ 237 (261)
....+..+.. ...+.+.+|++|||+|+|++|.++|++.++.+.+..++ +++++++++||+++.|+ |++|++.
T Consensus 163 ~~~~~~~~~~-----~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~ 237 (247)
T 1tqh_A 163 TLKALQELIA-----DVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHED 237 (247)
T ss_dssp THHHHHHHHH-----HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHH
T ss_pred HHHHHHHHHH-----HHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCccHHHHHHH
Confidence 1111111110 01234678999999999999999999887777655553 58999999999999875 7999999
Q ss_pred HHHHHHhc
Q 024900 238 VESFVTRH 245 (261)
Q Consensus 238 l~~fl~~~ 245 (261)
|.+|+++.
T Consensus 238 i~~Fl~~~ 245 (247)
T 1tqh_A 238 IYAFLESL 245 (247)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhc
Confidence 99999864
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=197.93 Aligned_cols=216 Identities=14% Similarity=0.098 Sum_probs=136.3
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
+|+|+++|+||||.|+.+.. ..+++.++++|+.+++++++. ++++|+||||||.+++.+|..+|++|+++|++
T Consensus 31 g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 104 (258)
T 3dqz_A 31 GHRVTAVELAASGIDPRPIQ------AVETVDEYSKPLIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFL 104 (258)
T ss_dssp TCEEEEECCTTSTTCSSCGG------GCCSHHHHHHHHHHHHHTSCTTCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEE
T ss_pred CCEEEEecCCCCcCCCCCCC------ccccHHHhHHHHHHHHHHhcccCceEEEEeChhHHHHHHHHHhChHhhcEEEEe
Confidence 59999999999999986531 348999999999999999988 89999999999999999999999999999999
Q ss_pred ecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHH----------HhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 024900 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY----------KMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (261)
++....... ........+..... ......+. .......... ..+.. ...++.......
T Consensus 105 ~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~ 172 (258)
T 3dqz_A 105 NAFLPDTTH-----VPSHVLDKYMEMPG-GLGDCEFSSHETRNGTMSLLKMGPKFMK----ARLYQ--NCPIEDYELAKM 172 (258)
T ss_dssp SCCCCCSSS-----CTTHHHHHHHTSTT-CCTTCEEEEEEETTEEEEEEECCHHHHH----HHTST--TSCHHHHHHHHH
T ss_pred cCCCCCCCC-----cchHHHHHhcccch-hhhhcccchhhhhccChhhhhhhHHHHH----HHhhc--cCCHHHHHHHHH
Confidence 975322100 00001111100000 00000000 0000111111 11111 111222111110
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhH
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
. ...... +....... .. .......++||++|+|++|.++|++..+.+.+..+++++++++++||++++|+|+++
T Consensus 173 ~-~~~~~~--~~~~~~~~-~~--~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 246 (258)
T 3dqz_A 173 L-HRQGSF--FTEDLSKK-EK--FSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVSKVYEIDGGDHMVMLSKPQKL 246 (258)
T ss_dssp H-CCCEEC--CHHHHHTS-CC--CCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCCSCEEEETTCCSCHHHHSHHHH
T ss_pred h-ccCCch--hhhhhhcc-cc--ccccccccCCEEEEECCCCeeeCHHHHHHHHHhCCcccEEEcCCCCCchhhcChHHH
Confidence 0 000000 10101100 01 111223479999999999999999888877777777899999999999999999999
Q ss_pred HHHHHHHHHhc
Q 024900 235 NPLVESFVTRH 245 (261)
Q Consensus 235 ~~~l~~fl~~~ 245 (261)
++.|.+|+++.
T Consensus 247 ~~~i~~fl~~~ 257 (258)
T 3dqz_A 247 FDSLSAIATDY 257 (258)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999999874
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=201.88 Aligned_cols=226 Identities=17% Similarity=0.199 Sum_probs=143.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|..+.... ...++++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++|
T Consensus 51 l~~g~~v~~~d~~G~G~s~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lv 127 (282)
T 3qvm_A 51 LEKQFTVIVFDYVGSGQSDLESFST---KRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDIT 127 (282)
T ss_dssp HHTTSEEEECCCTTSTTSCGGGCCT---TGGGSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHGGGEEEEE
T ss_pred HhcCceEEEEecCCCCCCCCCCCCc---cccccHHHHHHHHHHHHHHcCCCceEEEEecccHHHHHHHHHhCchhhheEE
Confidence 5679999999999999998653110 1234899999999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCC---CchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 83 LLNISLRMLHIKKQPWY---GRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++++......... .+. .......+......... .....+....+. ....++....+.......
T Consensus 128 l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 193 (282)
T 3qvm_A 128 MICPSPCFMNFPP-DYVGGFERDDLEELINLMDKNYI-----------GWANYLAPLVMG--ASHSSELIGELSGSFCTT 193 (282)
T ss_dssp EESCCSBSBEETT-TEECSBCHHHHHHHHHHHHHCHH-----------HHHHHHHHHHHC--TTSCHHHHHHHHHHHHHS
T ss_pred EecCcchhccCch-hhhchhccccHHHHHHHHhcchh-----------hHHHHHHhhccC--CccchhhHHHHHHHHhcC
Confidence 9998653321100 000 01111111111111000 000000001111 111122222211110000
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
. ......+............+.++++|+++|+|++|.++|.+..+.+.+..++.++++++++||+++.|+|+++++.|.
T Consensus 194 ~-~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 272 (282)
T 3qvm_A 194 D-PIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNSQLELIQAEGHCLHMTDAGLITPLLI 272 (282)
T ss_dssp C-HHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHH
T ss_pred C-cHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCCCCcEEEecCCCCcccccCHHHHHHHHH
Confidence 0 111111111100111234578899999999999999999988777777677789999999999999999999999999
Q ss_pred HHHHhcC
Q 024900 240 SFVTRHA 246 (261)
Q Consensus 240 ~fl~~~~ 246 (261)
+|++++.
T Consensus 273 ~fl~~~~ 279 (282)
T 3qvm_A 273 HFIQNNQ 279 (282)
T ss_dssp HHHHHC-
T ss_pred HHHHhcC
Confidence 9998754
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=209.97 Aligned_cols=200 Identities=23% Similarity=0.265 Sum_probs=129.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--cCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
.+|+|+++|+||||.|.... ..+++.++++|+.++++.+ +.++++|+||||||.+++.+|..+|++|+++|
T Consensus 77 ~Gy~Via~Dl~GhG~S~~~~-------~~~~~~~~~~d~~~~~~~l~~~~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lv 149 (281)
T 4fbl_A 77 AGYTVATPRLTGHGTTPAEM-------AASTASDWTADIVAAMRWLEERCDVLFMTGLSMGGALTVWAAGQFPERFAGIM 149 (281)
T ss_dssp TTCEEEECCCTTSSSCHHHH-------HTCCHHHHHHHHHHHHHHHHHHCSEEEEEEETHHHHHHHHHHHHSTTTCSEEE
T ss_pred CCCEEEEECCCCCCCCCccc-------cCCCHHHHHHHHHHHHHHHHhCCCeEEEEEECcchHHHHHHHHhCchhhhhhh
Confidence 47999999999999996421 2468999999999999887 57899999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
++++..... ....... ....... ........ ....+...............
T Consensus 150 l~~~~~~~~---------~~~~~~~-~~~~~~~---~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~ 200 (281)
T 4fbl_A 150 PINAALRME---------SPDLAAL-AFNPDAP---AELPGIGS----------------DIKAEGVKELAYPVTPVPAI 200 (281)
T ss_dssp EESCCSCCC---------CHHHHHH-HTCTTCC---SEEECCCC----------------CCSSTTCCCCCCSEEEGGGH
T ss_pred cccchhccc---------chhhHHH-HHhHhhH---Hhhhcchh----------------hhhhHHHHHhhhccCchHHH
Confidence 999754321 0000000 0000000 00000000 00000000000000000011
Q ss_pred HHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC--CCccEEEcCCCCCCCCCC-ChhhHHHHHH
Q 024900 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD--SVEDFIVLPNVGHCPQDE-APHLVNPLVE 239 (261)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-~p~~~~~~l~ 239 (261)
..+..+... ....+.+|++|||+|+|++|.++|++.++.+.+.. ++.++++++++||+++.| +|+++++.|.
T Consensus 201 ~~~~~~~~~-----~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~ 275 (281)
T 4fbl_A 201 KHLITIGAV-----AEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSL 275 (281)
T ss_dssp HHHHHHHHH-----HHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred HHHHHhhhh-----ccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHH
Confidence 111111111 12357789999999999999999998877665433 445899999999998877 5999999999
Q ss_pred HHHHhc
Q 024900 240 SFVTRH 245 (261)
Q Consensus 240 ~fl~~~ 245 (261)
+||++|
T Consensus 276 ~FL~~H 281 (281)
T 4fbl_A 276 AFIRKH 281 (281)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999875
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-29 Score=203.27 Aligned_cols=223 Identities=17% Similarity=0.261 Sum_probs=141.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
++++|+|+++|+||||.|+.+... ...++++++++|+.++++.++.++++|+||||||.+++.+|..+|+ +.++|
T Consensus 48 ~~~g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~v 122 (279)
T 4g9e_A 48 IGKKWRVIAPDLPGHGKSTDAIDP----DRSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLM 122 (279)
T ss_dssp HHHHEEEEEECCTTSTTSCCCSCH----HHHSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEE
T ss_pred HhcCCeEEeecCCCCCCCCCCCCc----ccCCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEE
Confidence 567899999999999999864211 1347999999999999999999999999999999999999999999 89999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
+++++........ ........................+....+.. ...+.....+.... ....
T Consensus 123 l~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~ 185 (279)
T 4g9e_A 123 ITGTPPVAREEVG-------------QGFKSGPDMALAGQEIFSERDVESYARSTCGE--PFEASLLDIVARTD--GRAR 185 (279)
T ss_dssp EESCCCCCGGGHH-------------HHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCS--SCCHHHHHHHHHSC--HHHH
T ss_pred EecCCCCCCCccc-------------hhhccchhhhhcCcccccHHHHHHHHHhhccC--cccHHHHHHHHhhh--ccch
Confidence 9987643211000 00000000000000001111111111111111 11122222221110 0001
Q ss_pred HHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhc-cCCCCccEEEcCCCCCCCCCCChhhHHHHHHHH
Q 024900 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG-NFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241 (261)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 241 (261)
..................+.++++|||+|+|++|.++|.+..+.+. +..+++++++++++||++++|+|+++++.|.+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 265 (279)
T 4g9e_A 186 RIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLARF 265 (279)
T ss_dssp HHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred HHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCCCCeEEEECCCCcchHHhCHHHHHHHHHHH
Confidence 1111111111111112346788999999999999999998877765 566788999999999999999999999999999
Q ss_pred HHhcCC
Q 024900 242 VTRHAT 247 (261)
Q Consensus 242 l~~~~~ 247 (261)
|++...
T Consensus 266 l~~~~~ 271 (279)
T 4g9e_A 266 IRDCTQ 271 (279)
T ss_dssp HHHHHS
T ss_pred HHHhhh
Confidence 987544
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=199.91 Aligned_cols=212 Identities=12% Similarity=0.053 Sum_probs=135.0
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
+|+|+++|+||||.|+.+.. ..|+++++++|+.++++.++ .++++|+||||||.+++.+|..+|++|+++|++
T Consensus 39 g~~v~~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 112 (267)
T 3sty_A 39 GHNVTALDLGASGINPKQAL------QIPNFSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFL 112 (267)
T ss_dssp TCEEEEECCTTSTTCSCCGG------GCCSHHHHHHHHHHHHHTSCTTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEE
T ss_pred CCeEEEeccccCCCCCCcCC------ccCCHHHHHHHHHHHHHhcCCCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEe
Confidence 69999999999999987531 24899999999999999994 899999999999999999999999999999999
Q ss_pred ecchhhhhhccCCCCCchhhHHHHHHh--hhhhhhHHHH----------HhhcChHHHHHHHHhhcCCCCCCcHHHHHH-
Q 024900 85 NISLRMLHIKKQPWYGRPLIRSFQNLL--RNTAAGKLFY----------KMVATSESVRNILCQCYNDTSQVTEELVEK- 151 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (261)
++..... ............ ........+. .......... ..+.. ...++....
T Consensus 113 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~ 178 (267)
T 3sty_A 113 SGLMPGP--------NIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLA----TNVYH--LSPIEDLALA 178 (267)
T ss_dssp SCCCCBT--------TBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHHHH----HHTST--TSCHHHHHHH
T ss_pred cCCCCCC--------cchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHHHHH----Hhhcc--cCCHHHHHHH
Confidence 9754221 011111111110 0000000000 0000111111 11111 111221111
Q ss_pred --HhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCC
Q 024900 152 --ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 229 (261)
...+... .....+ .... .. ......++||++|+|++|.++|++..+.+.+..+++++++++++||++++|
T Consensus 179 ~~~~~~~~~-~~~~~~---~~~~--~~--~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 250 (267)
T 3sty_A 179 TALVRPLYL-YLAEDI---SKEV--VL--SSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMS 250 (267)
T ss_dssp HHHCCCEEC-CCHHHH---HHHC--CC--CTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSCCSEEEECTTCCSCHHHH
T ss_pred HHhhccchh-HHHHHh---hcch--hc--ccccccCCCEEEEEeCCCCccCHHHHHHHHHhCCCceEEEeCCCCcccccc
Confidence 1111000 000111 1100 01 111223799999999999999988877777767779999999999999999
Q ss_pred ChhhHHHHHHHHHHhc
Q 024900 230 APHLVNPLVESFVTRH 245 (261)
Q Consensus 230 ~p~~~~~~l~~fl~~~ 245 (261)
+|++|++.|.+|++++
T Consensus 251 ~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 251 KPQQLFTTLLSIANKY 266 (267)
T ss_dssp SHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHhc
Confidence 9999999999999874
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-28 Score=203.90 Aligned_cols=228 Identities=14% Similarity=0.115 Sum_probs=132.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+++|+|+++|+||||+|+.+.. ...|++.++++|+.++++++++++++||||||||.||+.+|+.+|++|+++|+
T Consensus 61 ~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 135 (317)
T 1wm1_A 61 PERYKVLLFDQRGCGRSRPHAS-----LDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVL 135 (317)
T ss_dssp TTTEEEEEECCTTSTTCBSTTC-----CTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEE
T ss_pred ccCCeEEEECCCCCCCCCCCcc-----cccccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeE
Confidence 4689999999999999975421 13578999999999999999999999999999999999999999999999999
Q ss_pred eecchhhhh-hc--cCCCCCchhhHHHHHHhhhhh------hhHHHHHhhcC-hHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 024900 84 LNISLRMLH-IK--KQPWYGRPLIRSFQNLLRNTA------AGKLFYKMVAT-SESVRNILCQCYNDTSQVTEELVEKIL 153 (261)
Q Consensus 84 ~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
+++...... .. ............+........ ....+...+.. ...........+ ..+....
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 207 (317)
T 1wm1_A 136 RGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLW--------SVWEGET 207 (317)
T ss_dssp ESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHH--------HHHHHTT
T ss_pred eccCCCchhhhhHHhhccchhhcHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccc--------cccccch
Confidence 986432110 00 000000000000111000000 00000000000 000000000000 0000000
Q ss_pred ccCCC--------C-chHHHHHH----HH---hhcCCCC-ccccCCCCC-CCEEEEecCCCCCCCchhhhhhccCCCCcc
Q 024900 154 QPGLE--------T-GAADVFLE----FI---CYSGGPL-PEELLPQVK-CPVLIAWGDKDPWEPIELGRAYGNFDSVED 215 (261)
Q Consensus 154 ~~~~~--------~-~~~~~~~~----~~---~~~~~~~-~~~~l~~i~-~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~ 215 (261)
..... . .....+.. +. .+..... ..+.+.+|+ ||||+|+|++|.++|++.++.+.+..|+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~~~ 287 (317)
T 1wm1_A 208 VTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAE 287 (317)
T ss_dssp SSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSE
T ss_pred hhccCCcccccccccchhhhHHHhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCCce
Confidence 00000 0 00000000 00 0100001 122356674 999999999999999888777777778899
Q ss_pred EEEcCCCCCCCCCC-ChhhHHHHHHHHHHh
Q 024900 216 FIVLPNVGHCPQDE-APHLVNPLVESFVTR 244 (261)
Q Consensus 216 ~~~i~~~gH~~~~e-~p~~~~~~l~~fl~~ 244 (261)
+++++++||+++.+ .++++.+.|.+|+.+
T Consensus 288 ~~~i~~~gH~~~~~~~~~~~~~~i~~f~~~ 317 (317)
T 1wm1_A 288 LHIVEGAGHSYDEPGILHQLMIATDRFAGK 317 (317)
T ss_dssp EEEETTCCSSTTSHHHHHHHHHHHHHHTC-
T ss_pred EEEECCCCCCCCCcchHHHHHHHHHHHhcC
Confidence 99999999999765 688999999999853
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-28 Score=200.20 Aligned_cols=219 Identities=16% Similarity=0.142 Sum_probs=134.6
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+.. ..++++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++
T Consensus 65 ~L~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 138 (292)
T 3l80_A 65 KLPDSIGILTIDAPNSGYSPVSNQ------ANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGF 138 (292)
T ss_dssp TSCTTSEEEEECCTTSTTSCCCCC------TTCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEE
T ss_pred HHhhcCeEEEEcCCCCCCCCCCCc------ccccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeE
Confidence 578899999999999999984331 35899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHH--HhhhhhhhH-H---HHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhcc
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQN--LLRNTAAGK-L---FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (261)
|++++......... .. .......... ......... . .......+........ ........+...
T Consensus 139 vl~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 208 (292)
T 3l80_A 139 IGLEPTTVMIYRAG-FS-SDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWR--------GYDYCQRQLNDV 208 (292)
T ss_dssp EEESCCCHHHHHHC-TT-SSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHH--------HHHHHHHHHHTT
T ss_pred EEECCCCcchhhhc-cc-cccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhHH--------HHHHHHHHHHhh
Confidence 99996533211000 00 0000010000 000000000 0 0000011110000000 000000000000
Q ss_pred CCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
..-.. ...+ ....... ..+.++. ++|||+|+|++|..++.+ + .+.+..++++ ++++++||++++|+|++++
T Consensus 209 ~~l~~-~~~~---~~~~~~~-~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~~~~-~~~~~~gH~~~~e~p~~~~ 279 (292)
T 3l80_A 209 QSLPD-FKIR---LALGEED-FKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKHTQTK-LILCGQHHYLHWSETNSIL 279 (292)
T ss_dssp TTSTT-CCSS---CCCCGGG-GCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCTTCE-EEECCSSSCHHHHCHHHHH
T ss_pred hhccc-cchh---hhhcchh-hhhccCC-CCCEEEEEccCccccchH-H-HHhccCCCce-eeeCCCCCcchhhCHHHHH
Confidence 00000 0000 0000000 0134666 999999999999998888 6 6666677788 8999999999999999999
Q ss_pred HHHHHHHHhc
Q 024900 236 PLVESFVTRH 245 (261)
Q Consensus 236 ~~l~~fl~~~ 245 (261)
+.|.+|++++
T Consensus 280 ~~i~~fl~~~ 289 (292)
T 3l80_A 280 EKVEQLLSNH 289 (292)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhc
Confidence 9999999865
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-30 Score=215.73 Aligned_cols=240 Identities=18% Similarity=0.187 Sum_probs=139.9
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+... .....|+++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++
T Consensus 47 ~l~~g~~v~~~D~~G~G~s~~~~~~--~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~l 124 (304)
T 3b12_A 47 LLANEYTVVCADLRGYGGSSKPVGA--PDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSL 124 (304)
Confidence 4678999999999999999865210 00135799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCC-CCchhhHHHHHHhhhh-hhhHHHHHhhcChHHHHH-HHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 82 ILLNISLRMLHIKKQPW-YGRPLIRSFQNLLRNT-AAGKLFYKMVATSESVRN-ILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
|++++............ ........ ...... ........ ......... ++..........+++.+..+......
T Consensus 125 vl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (304)
T 3b12_A 125 AVLDIIPTYVMFEEVDRFVARAYWHW--YFLQQPAPYPEKVIG-ADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRD 201 (304)
Confidence 99997643221100000 00000000 000000 00000000 000000111 11111111111222222222111111
Q ss_pred CchHHHHHHHH-hhcC---CCCccccCCCCCCCEEEEecCCCCCC-CchhhhhhccCCCCccEEEcCCCCCCCCCCChhh
Q 024900 159 TGAADVFLEFI-CYSG---GPLPEELLPQVKCPVLIAWGDKDPWE-PIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 159 ~~~~~~~~~~~-~~~~---~~~~~~~l~~i~~Pvlii~G~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
........... .... .......+.+++||||+|+|++|..+ +....+.+.+..++.++.++ ++||++++|+|++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~ 280 (304)
T 3b12_A 202 PAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASL-PGGHFFVDRFPDD 280 (304)
Confidence 11001110000 0000 00011226789999999999999544 55555566666777889999 9999999999999
Q ss_pred HHHHHHHHHHhcCC
Q 024900 234 VNPLVESFVTRHAT 247 (261)
Q Consensus 234 ~~~~l~~fl~~~~~ 247 (261)
|++.|.+||++...
T Consensus 281 ~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 281 TARILREFLSDARS 294 (304)
Confidence 99999999987643
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-28 Score=208.54 Aligned_cols=234 Identities=18% Similarity=0.152 Sum_probs=138.6
Q ss_pred CCCCeEEEecCCCCCCCC-------CCCCCCCC-------CCCCCCHHHHHHHHHHHHHHhcCCCeE-EEEcChhHHHHH
Q 024900 4 AKSHRVYSIDLIGYGYSD-------KPNPRDFF-------DKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGL 68 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~-------~~~~~~~~-------~~~~~~~~~~a~dl~~~~~~l~~~~~~-lvGhS~Gg~va~ 68 (261)
+++|+|+++|+||||.|+ .+...... ....|+++++++|+.+++++++.++++ |+||||||.|++
T Consensus 83 ~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~ 162 (377)
T 3i1i_A 83 TNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQ 162 (377)
T ss_dssp TTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHH
T ss_pred cccEEEEEecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHH
Confidence 578999999999998754 11100000 011579999999999999999999996 999999999999
Q ss_pred HHHhhCcccccceEE-eecchhhhhhccCCCCCchhhHHHHHHhhhhh-h----------------hH-HHHHhhcChHH
Q 024900 69 QAAVMEPEICRGMIL-LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA-A----------------GK-LFYKMVATSES 129 (261)
Q Consensus 69 ~~a~~~p~~v~~lv~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~-~~~~~~~~~~~ 129 (261)
.+|+++|++|+++|+ +++++....... .+.......+...+ . .. ........+..
T Consensus 163 ~~a~~~p~~v~~lvl~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 236 (377)
T 3i1i_A 163 QWAVHYPHMVERMIGVITNPQNPIITSV------NVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHF 236 (377)
T ss_dssp HHHHHCTTTBSEEEEESCCSBCCHHHHH------HTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHH
T ss_pred HHHHHChHHHHHhcccCcCCCcCCchhh------HHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHH
Confidence 999999999999999 766543110000 00000000000000 0 00 00000011111
Q ss_pred HHHHHHhhcCCCCC-------C-----cHHHHHHHhccCCCCchHHHHHHHH----hhcC---CCCccccCCCCCCCEEE
Q 024900 130 VRNILCQCYNDTSQ-------V-----TEELVEKILQPGLETGAADVFLEFI----CYSG---GPLPEELLPQVKCPVLI 190 (261)
Q Consensus 130 ~~~~~~~~~~~~~~-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~l~~i~~Pvli 190 (261)
+.. .+..... . .+.++...............+.... .... .....+.+.+|+||||+
T Consensus 237 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 312 (377)
T 3i1i_A 237 YET----TYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLM 312 (377)
T ss_dssp HHH----HSCCCSSCCGGGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEE
T ss_pred HHH----HhhhhhccccccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEE
Confidence 111 1111000 0 1122221111111111111111111 1100 00112346789999999
Q ss_pred EecCCCCCCCchhhhhhccCC----CCccEEEcCC-CCCCCCCCChhhHHHHHHHHHHhcCC
Q 024900 191 AWGDKDPWEPIELGRAYGNFD----SVEDFIVLPN-VGHCPQDEAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 191 i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~-~gH~~~~e~p~~~~~~l~~fl~~~~~ 247 (261)
|+|++|.++|++..+.+.+.. ++++++++++ +||++++|+|++|++.|.+||+++..
T Consensus 313 i~G~~D~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 313 IPCKQDLLQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKVS 374 (377)
T ss_dssp ECBTTCSSSCTHHHHHHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCCS
T ss_pred EecCCccccCHHHHHHHHHHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhhh
Confidence 999999999998877766555 7889999998 99999999999999999999987653
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-28 Score=205.91 Aligned_cols=219 Identities=12% Similarity=0.184 Sum_probs=135.3
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEee
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 85 (261)
+|+|+++|+||||.|+.+.. ..|+++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++|+++
T Consensus 105 g~~Vi~~D~~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 178 (330)
T 3p2m_A 105 GEPALAVDLPGHGHSAWRED------GNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVD 178 (330)
T ss_dssp CCCEEEECCTTSTTSCCCSS------CBCCHHHHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEES
T ss_pred CCeEEEEcCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEc
Confidence 79999999999999986432 358999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhcc-CCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHH-HHhccCCCCchHH
Q 024900 86 ISLRMLHIKK-QPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVE-KILQPGLETGAAD 163 (261)
Q Consensus 86 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 163 (261)
+.+....... .......... ..... ................ ......+.+. .+...........
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 244 (330)
T 3p2m_A 179 VTPSALQRHAELTAEQRGTVA----LMHGE-------REFPSFQAMLDLTIAA---APHRDVKSLRRGVFHNSRRLDNGN 244 (330)
T ss_dssp CCHHHHHHHHHHTCC----------------------CCBSCHHHHHHHHHHH---CTTSCHHHHHHHHHTTEEECSSSC
T ss_pred CCCccchhhhhhhhhhhhhhh----hhcCC-------ccccCHHHHHHHHHhc---CCCCCHHHHHHHHHhcccccCCCc
Confidence 7643211000 0000000000 00000 0000000000000000 0001111111 1111000000000
Q ss_pred HHHHHHhhcCCCC---ccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCcc-EEEcCCCCCCCCCCChhhHHHHHH
Q 024900 164 VFLEFICYSGGPL---PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED-FIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 164 ~~~~~~~~~~~~~---~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
....+........ ..+.+.+|++|||+|+|++|.++|.+..+.+.+..++++ +++++++||++++|+|++|++.|.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 324 (330)
T 3p2m_A 245 WVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVR 324 (330)
T ss_dssp EEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCSSEEEEEEETTCCSCHHHHCHHHHHHHHH
T ss_pred eEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeeEEEeCCCCCCcchhCHHHHHHHHH
Confidence 0000000000000 012356789999999999999999988877777777788 999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+||++
T Consensus 325 ~fl~~ 329 (330)
T 3p2m_A 325 GVLDT 329 (330)
T ss_dssp HHTTC
T ss_pred HHHhc
Confidence 99965
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=204.44 Aligned_cols=237 Identities=12% Similarity=0.086 Sum_probs=139.7
Q ss_pred cCCCCeEEEecCCC--CCCCCCCCCCCCC-C-----CCCCCHHHHHHHHHHHHHHhcCCCe-EEEEcChhHHHHHHHHhh
Q 024900 3 LAKSHRVYSIDLIG--YGYSDKPNPRDFF-D-----KPFYTFETWASQLNDFCKDVVKDQA-FFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 3 L~~~~~V~~~Dl~G--~G~S~~~~~~~~~-~-----~~~~~~~~~a~dl~~~~~~l~~~~~-~lvGhS~Gg~va~~~a~~ 73 (261)
++++|+|+++|+|| ||.|......+.. . ...|+++++++|+.++++.++.+++ +|+||||||.+++.+|..
T Consensus 86 ~~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 165 (366)
T 2pl5_A 86 DTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIA 165 (366)
T ss_dssp ETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHH
T ss_pred cccccEEEEecCCCcccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHh
Confidence 37889999999999 8999753211000 0 0147999999999999999999998 899999999999999999
Q ss_pred CcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhh-------------hhH---HHHH--hhcChHHHHHHHH
Q 024900 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA-------------AGK---LFYK--MVATSESVRNILC 135 (261)
Q Consensus 74 ~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~---~~~~--~~~~~~~~~~~~~ 135 (261)
+|++|+++|++++........ ..+.......+...+ ... .... ...........+.
T Consensus 166 ~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (366)
T 2pl5_A 166 YPNSLSNCIVMASTAEHSAMQ------IAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFG 239 (366)
T ss_dssp STTSEEEEEEESCCSBCCHHH------HHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHT
T ss_pred CcHhhhheeEeccCccCCCcc------chhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhh
Confidence 999999999999754321000 000000000000000 000 0000 0011111111111
Q ss_pred hhcCCCCC-CcHHHHHHHhc----cCCCCchHHHHHHHH-hhcCCCC-----ccccCCCCCCCEEEEecCCCCCCCchhh
Q 024900 136 QCYNDTSQ-VTEELVEKILQ----PGLETGAADVFLEFI-CYSGGPL-----PEELLPQVKCPVLIAWGDKDPWEPIELG 204 (261)
Q Consensus 136 ~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~-----~~~~l~~i~~Pvlii~G~~D~~~~~~~~ 204 (261)
..+..... ...+.+..+.. ..........+.... ....... ..+.+.+|++|||+|+|++|.++|++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 319 (366)
T 2pl5_A 240 RNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQS 319 (366)
T ss_dssp TSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHH
T ss_pred hhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHH
Confidence 11110000 00000000100 000000111111111 1100000 1125788999999999999999999887
Q ss_pred hhhccCCC----CccEEEc-CCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 205 RAYGNFDS----VEDFIVL-PNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 205 ~~~~~~~~----~~~~~~i-~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
+.+.+..+ +++++++ +++||++++|+|++|++.|.+||++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 320 REIVKSLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENP 365 (366)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCC
T ss_pred HHHHHHhhhcccCeEEEEeCCCCCcchhhcChhHHHHHHHHHHccC
Confidence 77666555 6899999 89999999999999999999999764
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=199.09 Aligned_cols=217 Identities=15% Similarity=0.265 Sum_probs=141.9
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+. ..++++++++|+.++++.++.++++++||||||.+++.+|..+|++|+++
T Consensus 90 ~L~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~l 162 (314)
T 3kxp_A 90 RLSDRFTTIAVDQRGHGLSDKPE-------TGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSV 162 (314)
T ss_dssp TTTTTSEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHcCCeEEEEeCCCcCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEE
Confidence 46778999999999999998442 35799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC---
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE--- 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 158 (261)
|++++.+... ......+........ ............+...+. ....+...........
T Consensus 163 vl~~~~~~~~---------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 224 (314)
T 3kxp_A 163 VAIDFTPYIE---------TEALDALEARVNAGS------QLFEDIKAVEAYLAGRYP---NIPADAIRIRAESGYQPVD 224 (314)
T ss_dssp EEESCCTTCC---------HHHHHHHHHHTTTTC------SCBSSHHHHHHHHHHHST---TSCHHHHHHHHHHSEEEET
T ss_pred EEeCCCCCCC---------cchhhHHHHHhhhch------hhhcCHHHHHHHHHhhcc---cCchHHHHHHhhhhhcccc
Confidence 9998754221 000111111111000 000011111111111111 1112222211110000
Q ss_pred -----CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhh
Q 024900 159 -----TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 159 -----~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
.........+...... ...+.+.++++|+|+|+|++|.++|.+..+.+.+..++.++.+++++||+++.|+|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~e~~~~ 303 (314)
T 3kxp_A 225 GGLRPLASSAAMAQTARGLRS-DLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVNEVSPEI 303 (314)
T ss_dssp TEEEESSCHHHHHHHHHHTTS-CCHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHCTTSCEEEETTCCSCHHHHCHHH
T ss_pred cccccccChhhhhhhccccCc-chhhHhhcCCCCEEEEecCCCccCCHHHHHHHHHhCCCceEEEcCCCCCcchhhCHHH
Confidence 0000111111111111 1123467899999999999999999988777776667899999999999999999999
Q ss_pred HHHHHHHHHHh
Q 024900 234 VNPLVESFVTR 244 (261)
Q Consensus 234 ~~~~l~~fl~~ 244 (261)
+++.|.+||++
T Consensus 304 ~~~~i~~fl~~ 314 (314)
T 3kxp_A 304 TLKAITNFIDA 314 (314)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999999964
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=199.68 Aligned_cols=220 Identities=20% Similarity=0.264 Sum_probs=139.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||||.|+.+.. ..++++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++|++
T Consensus 72 ~g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~ 145 (315)
T 4f0j_A 72 AGYRVIAVDQVGFCKSSKPAH------YQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLV 145 (315)
T ss_dssp TTCEEEEECCTTSTTSCCCSS------CCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCeEEEeecCCCCCCCCCCc------cccCHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEe
Confidence 369999999999999986531 35799999999999999999999999999999999999999999999999999
Q ss_pred ecchhhhh-hccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCC--CCCCcHHHHHHHhccCCCCch
Q 024900 85 NISLRMLH-IKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND--TSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 85 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 161 (261)
++...... ....+. ......+...... ............+.. .......+.............
T Consensus 146 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (315)
T 4f0j_A 146 NPIGLEDWKALGVPW--RSVDDWYRRDLQT------------SAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGR 211 (315)
T ss_dssp SCSCSSCHHHHTCCC--CCHHHHHHHHTTC------------CHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTH
T ss_pred cCcccCCcccccchh--hhhHHHHhhcccC------------ChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCc
Confidence 97532110 000111 1111111111110 111111111111111 011111222111110001111
Q ss_pred HH-HHH---HHHhhcCCCCccccCCCCCCCEEEEecCCCCCCC----------------chhhhhhccCCCCccEEEcCC
Q 024900 162 AD-VFL---EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP----------------IELGRAYGNFDSVEDFIVLPN 221 (261)
Q Consensus 162 ~~-~~~---~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~----------------~~~~~~~~~~~~~~~~~~i~~ 221 (261)
.. ... ....... ......+.++++|+|+|+|++|.++| .+..+.+.+..++.+++++++
T Consensus 212 ~~~~~~~~~~~~~~~~-~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (315)
T 4f0j_A 212 ESVAWNSALTYDMIFT-QPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPD 290 (315)
T ss_dssp HHHHHHHHHHHHHHHH-CCCGGGGGGCCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETT
T ss_pred chhhHHHHHhcCcccc-chhhhhcccCCCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCC
Confidence 00 000 0000011 11234578899999999999999998 555666666667889999999
Q ss_pred CCCCCCCCChhhHHHHHHHHHHhc
Q 024900 222 VGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 222 ~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
+||+++.|+|+++++.|.+||+++
T Consensus 291 ~gH~~~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 291 LGHTPQIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp CCSCHHHHSHHHHHHHHHHHHCC-
T ss_pred CCcchhhhCHHHHHHHHHHHhccC
Confidence 999999999999999999999764
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8.7e-27 Score=206.45 Aligned_cols=222 Identities=17% Similarity=0.190 Sum_probs=144.0
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC-cccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lv 82 (261)
+.+|+|+++|+||||.|+.+. ..++++++++|+.++++.++.++++|+||||||.+++.+|+.+ |++|+++|
T Consensus 49 ~~Gy~Vi~~D~rG~G~S~~~~-------~~~s~~~~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lV 121 (456)
T 3vdx_A 49 DAGYRVITYDRRGFGQSSQPT-------TGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVA 121 (456)
T ss_dssp HHTEEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEE
T ss_pred HCCcEEEEECCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEE
Confidence 568999999999999998653 3579999999999999999999999999999999999999987 99999999
Q ss_pred EeecchhhhhhccCCCCCc---hhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCC----CCCCcHHHHHHHhcc
Q 024900 83 LLNISLRMLHIKKQPWYGR---PLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND----TSQVTEELVEKILQP 155 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 155 (261)
++++............... .....+........ .......+...+.. .....++.+......
T Consensus 122 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (456)
T 3vdx_A 122 FLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADR-----------YAFYTGFFNDFYNLDENLGTRISEEAVRNSWNT 190 (456)
T ss_dssp EESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCH-----------HHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHH
T ss_pred EeCCcccccccccccccccchHHHHHHHHHhhhccc-----------hHHHHHHHHHHhcccccccccccHHHHHHHhhh
Confidence 9997543211100000011 11111111111000 00011111111111 112333333332221
Q ss_pred CCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch-hhhhhccCCCCccEEEcCCCCCCCCCCChhhH
Q 024900 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
...............+ .....+.+.+|++|||+|+|++|.++|.+ ..+.+.+..+++++++++++||++++++|+++
T Consensus 191 ~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v 268 (456)
T 3vdx_A 191 AASGGFFAAAAAPTTW--YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEV 268 (456)
T ss_dssp HHTSCTTHHHHGGGGT--TCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHH
T ss_pred ccccchhhhhhhhhhh--hhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHH
Confidence 1111111111111111 11123557899999999999999999988 56667766778999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 024900 235 NPLVESFVTRH 245 (261)
Q Consensus 235 ~~~l~~fl~~~ 245 (261)
++.|.+||++.
T Consensus 269 ~~~I~~FL~~~ 279 (456)
T 3vdx_A 269 NTALLAFLAKA 279 (456)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999864
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=199.51 Aligned_cols=79 Identities=18% Similarity=0.117 Sum_probs=70.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+++|+||++|+||||+|+.+.. ...|+++++++|+.++++++++++++|+||||||.||+.+|.++|++|++||+
T Consensus 58 ~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl 132 (313)
T 1azw_A 58 PAKYRIVLFDQRGSGRSTPHAD-----LVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVL 132 (313)
T ss_dssp TTTEEEEEECCTTSTTSBSTTC-----CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEE
T ss_pred cCcceEEEECCCCCcCCCCCcc-----cccccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEE
Confidence 4689999999999999975421 13478999999999999999999999999999999999999999999999999
Q ss_pred eecc
Q 024900 84 LNIS 87 (261)
Q Consensus 84 ~~~~ 87 (261)
+++.
T Consensus 133 ~~~~ 136 (313)
T 1azw_A 133 RGIF 136 (313)
T ss_dssp ESCC
T ss_pred eccc
Confidence 9864
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-27 Score=200.87 Aligned_cols=236 Identities=11% Similarity=0.048 Sum_probs=140.4
Q ss_pred c-CCCCeEEEecCCC-CCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHhcCCCeE-EEEcChhHHHHHHHHh
Q 024900 3 L-AKSHRVYSIDLIG-YGYSDKPNPRDFF-------DKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQAAV 72 (261)
Q Consensus 3 L-~~~~~V~~~Dl~G-~G~S~~~~~~~~~-------~~~~~~~~~~a~dl~~~~~~l~~~~~~-lvGhS~Gg~va~~~a~ 72 (261)
| +++|+|+++|+|| ||.|..+...... ....|+++++++|+.++++.++.++++ |+||||||.+|+.+|.
T Consensus 94 L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~ 173 (377)
T 2b61_A 94 LDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAI 173 (377)
T ss_dssp EETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHH
T ss_pred cccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHH
Confidence 6 7899999999999 7888755210000 001479999999999999999999998 9999999999999999
Q ss_pred hCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhh-h-------------h---HHHHH--hhcChHHHHHH
Q 024900 73 MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA-A-------------G---KLFYK--MVATSESVRNI 133 (261)
Q Consensus 73 ~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~---~~~~~--~~~~~~~~~~~ 133 (261)
.+|++|+++|++++....... ...+.......+...+ . . ..... .......+...
T Consensus 174 ~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (377)
T 2b61_A 174 DYPDFMDNIVNLCSSIYFSAE------AIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKA 247 (377)
T ss_dssp HSTTSEEEEEEESCCSSCCHH------HHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HCchhhheeEEeccCcccccc------chhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHH
Confidence 999999999999975321100 0000000000000000 0 0 00000 00111111111
Q ss_pred HHhhcCCC------CCCcHHHHHHH---hccCCCCchHHH-HHHHHhhcC---CCCccccCCCCCCCEEEEecCCCCCCC
Q 024900 134 LCQCYNDT------SQVTEELVEKI---LQPGLETGAADV-FLEFICYSG---GPLPEELLPQVKCPVLIAWGDKDPWEP 200 (261)
Q Consensus 134 ~~~~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~l~~i~~Pvlii~G~~D~~~~ 200 (261)
+....... ....++.+... +........... +..+..+.. .......+.+|++|||+|+|++|.++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~ 327 (377)
T 2b61_A 248 FGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFK 327 (377)
T ss_dssp TTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSC
T ss_pred hccccccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCC
Confidence 11000000 00111111110 000011001000 011111100 001124578899999999999999999
Q ss_pred c----hhhhhhccCCCCccEEEcC-CCCCCCCCCChhhHHHHHHHHHHh
Q 024900 201 I----ELGRAYGNFDSVEDFIVLP-NVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 201 ~----~~~~~~~~~~~~~~~~~i~-~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
+ +..+.+.+..+++++++++ ++||++++|+|++|++.|.+||++
T Consensus 328 ~~~~~~~~~~l~~~~~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 328 PIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHhcCCCceEEEeCCCCCchhhhcCHHHHHHHHHHHHhc
Confidence 8 7777777777789999999 999999999999999999999975
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=198.94 Aligned_cols=222 Identities=18% Similarity=0.259 Sum_probs=124.3
Q ss_pred cCC--CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--cC-CCeEEEEcChhHHHHHHHHhh--Cc
Q 024900 3 LAK--SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV--VK-DQAFFICNSIGGLVGLQAAVM--EP 75 (261)
Q Consensus 3 L~~--~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l--~~-~~~~lvGhS~Gg~va~~~a~~--~p 75 (261)
|++ +|+|+++|+||||.|+.+.. ..|+++++++|+.++++++ +. ++++||||||||.||+.+|.+ +|
T Consensus 61 L~~~~~~~via~Dl~GhG~S~~~~~------~~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p 134 (316)
T 3c5v_A 61 IISRVQCRIVALDLRSHGETKVKNP------EDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVP 134 (316)
T ss_dssp HHTTBCCEEEEECCTTSTTCBCSCT------TCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCT
T ss_pred HhhcCCeEEEEecCCCCCCCCCCCc------cccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCC
Confidence 556 89999999999999986431 3489999999999999999 55 789999999999999999996 57
Q ss_pred ccccceEEeecchhhh-hh--------ccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCc-
Q 024900 76 EICRGMILLNISLRML-HI--------KKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVT- 145 (261)
Q Consensus 76 ~~v~~lv~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 145 (261)
+ |+++|++++..... .. ...+.........+....... .......................
T Consensus 135 ~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 205 (316)
T 3c5v_A 135 S-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSG--------QIRNLESARVSMVGQVKQCEGITS 205 (316)
T ss_dssp T-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHHHHHHTT--------SCCCHHHHHHHHHHHEEECC----
T ss_pred C-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHHHhhhcc--------cccchhhhhhhhhHHhhhcccccc
Confidence 7 99999998642110 00 000000000000000000000 00000000000000000000000
Q ss_pred HHHH-H-HHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCC
Q 024900 146 EELV-E-KILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVG 223 (261)
Q Consensus 146 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~g 223 (261)
.... . ..............+.. .+. ....+.+.+|++|||+|+|++|.+.+.... ....++.++++|+++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~i~~P~Lli~g~~D~~~~~~~~---~~~~~~~~~~~i~~~g 278 (316)
T 3c5v_A 206 PEGSKKDHPYTWRIELAKTEKYWD--GWF--RGLSNLFLSCPIPKLLLLAGVDRLDKDLTI---GQMQGKFQMQVLPQCG 278 (316)
T ss_dssp --------CEEESCCGGGGHHHHH--HHH--TTHHHHHHHSSSCEEEEESSCCCCCHHHHH---HHHTTCSEEEECCCCS
T ss_pred ccccccccceeeeecccchhhhhh--hhh--hhhHHHhhcCCCCEEEEEecccccccHHHH---HhhCCceeEEEcCCCC
Confidence 0000 0 00000000000011000 000 000122446899999999999986543222 2234567999999999
Q ss_pred CCCCCCChhhHHHHHHHHHHhcC
Q 024900 224 HCPQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 224 H~~~~e~p~~~~~~l~~fl~~~~ 246 (261)
|++++|+|++|++.|.+||.+..
T Consensus 279 H~~~~e~p~~~~~~i~~fl~~~~ 301 (316)
T 3c5v_A 279 HAVHEDAPDKVAEAVATFLIRHR 301 (316)
T ss_dssp SCHHHHSHHHHHHHHHHHHHHTT
T ss_pred CcccccCHHHHHHHHHHHHHhcc
Confidence 99999999999999999997643
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-27 Score=211.94 Aligned_cols=235 Identities=19% Similarity=0.243 Sum_probs=143.4
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||||.|+.+.. ...|+++++++|+.++++.++.++++++||||||.+++.+|..+|++|+++|++
T Consensus 284 ~G~~v~~~D~~G~G~S~~~~~-----~~~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 358 (555)
T 3i28_A 284 AGYRVLAMDMKGYGESSAPPE-----IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASL 358 (555)
T ss_dssp TTCEEEEECCTTSTTSCCCSC-----GGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEecCCCCCCCCCCCC-----cccccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEE
Confidence 369999999999999987531 135789999999999999999999999999999999999999999999999999
Q ss_pred ecchhhhhhccCCC---CCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCC---------------------
Q 024900 85 NISLRMLHIKKQPW---YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND--------------------- 140 (261)
Q Consensus 85 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 140 (261)
+++........... ...+... +............... ......+...+..
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (555)
T 3i28_A 359 NTPFIPANPNMSPLESIKANPVFD-YQLYFQEPGVAEAELE-----QNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNS 432 (555)
T ss_dssp SCCCCCCCTTSCHHHHHHTCGGGH-HHHHHHSTTHHHHHHH-----HCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTS
T ss_pred ccCCCCCCcccchHHHHhcCCccc-hhHHhhCCCchHHHHh-----hhHHHHHHHHhccccccccccccccccccccccC
Confidence 87643211000000 0000000 0000000000000000 0000111111100
Q ss_pred ------CCCCcHHHHHHHhccCCCCchHHHH---HHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC
Q 024900 141 ------TSQVTEELVEKILQPGLETGAADVF---LEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD 211 (261)
Q Consensus 141 ------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~ 211 (261)
.....++.+..+.......+..... ..+..... ......+.++++|||+|+|++|.++|.+..+.+.+..
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~ 511 (555)
T 3i28_A 433 PEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWK-WACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI 511 (555)
T ss_dssp CSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTTSCHHHHHH-HHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC
T ss_pred ccccccccccCHHHHHHHHHHHhcccchhHHHHHHhccccch-hhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhC
Confidence 0112222222221111111100000 00000000 0012346789999999999999999998888888777
Q ss_pred CCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcCCCCCc
Q 024900 212 SVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHATPPAS 251 (261)
Q Consensus 212 ~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~~~~~~ 251 (261)
+++++++++++||++++|+|+++++.|.+||++....++.
T Consensus 512 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 551 (555)
T 3i28_A 512 PHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDARNPPV 551 (555)
T ss_dssp TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHTCC---
T ss_pred CCceEEEeCCCCCCcchhCHHHHHHHHHHHHHhccCCCCc
Confidence 8899999999999999999999999999999987665443
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=205.02 Aligned_cols=233 Identities=15% Similarity=0.140 Sum_probs=139.5
Q ss_pred c-CCCCeEEEecCCC--CCCCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHhcCCC-eEEEEcChhHHHHHHH
Q 024900 3 L-AKSHRVYSIDLIG--YGYSDKPNPRDFFD--------KPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQA 70 (261)
Q Consensus 3 L-~~~~~V~~~Dl~G--~G~S~~~~~~~~~~--------~~~~~~~~~a~dl~~~~~~l~~~~-~~lvGhS~Gg~va~~~ 70 (261)
| +++|+|+++|+|| ||.|+.....+... ...|+++++++|+.+++++++.++ ++|+||||||++++.+
T Consensus 138 L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~ 217 (444)
T 2vat_A 138 FDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEW 217 (444)
T ss_dssp BCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHH
T ss_pred hhccCCEEEEecCCCCCCCCCCCCCCCcccccccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHH
Confidence 5 6899999999999 79986421110000 013799999999999999999999 9999999999999999
Q ss_pred HhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHH-Hhhhhhh-------------h---HHHHHh--hcChHHHH
Q 024900 71 AVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN-LLRNTAA-------------G---KLFYKM--VATSESVR 131 (261)
Q Consensus 71 a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~---~~~~~~--~~~~~~~~ 131 (261)
|..+|++|+++|++++........ ..+...... +...... + ...... ......+
T Consensus 218 A~~~p~~v~~lVli~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 290 (444)
T 2vat_A 218 AFFGPEYVRKIVPIATSCRQSGWC------AAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAM- 290 (444)
T ss_dssp GGGCTTTBCCEEEESCCSBCCHHH------HHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHH-
T ss_pred HHhChHhhheEEEEeccccCCccc------hhHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHH-
Confidence 999999999999999764321000 000000000 0000000 0 000000 0001111
Q ss_pred HHHHhhcCCCCC-------------------------------Cc-HHHHHHHhccCCCCchHHHHHHHH-hhcCCC---
Q 024900 132 NILCQCYNDTSQ-------------------------------VT-EELVEKILQPGLETGAADVFLEFI-CYSGGP--- 175 (261)
Q Consensus 132 ~~~~~~~~~~~~-------------------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--- 175 (261)
...+..... .. +...+..............+.... .+...+
T Consensus 291 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 367 (444)
T 2vat_A 291 ---DERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISR 367 (444)
T ss_dssp ---HHHSCCCCCCC---------------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTT
T ss_pred ---HHHhccCccccccccccccccccccccccccccccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccc
Confidence 111111100 00 111100000000000011111111 111100
Q ss_pred ----CccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcC-CCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 176 ----LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP-NVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 176 ----~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~-~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
...+.+.+|++|||+|+|++|.++|.+..+.+.+..+++++++++ ++||++++|+|++|++.|.+||+++
T Consensus 368 ~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 368 GRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp TTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC-
T ss_pred cccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHh
Confidence 023457899999999999999999998877777777789999999 8999999999999999999999764
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-27 Score=200.08 Aligned_cols=208 Identities=21% Similarity=0.201 Sum_probs=134.5
Q ss_pred cCCCCeEEEecCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|+++|+|+++|+||| |.|..+. ..++++++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++
T Consensus 90 L~~g~~vi~~D~~G~gG~s~~~~-------~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~l 162 (306)
T 2r11_A 90 WSSKYRTYAVDIIGDKNKSIPEN-------VSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSA 162 (306)
T ss_dssp HHHHSEEEEECCTTSSSSCEECS-------CCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HhcCCEEEEecCCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeE
Confidence 556899999999999 8887642 34799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHH------HHHhcc
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELV------EKILQP 155 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 155 (261)
|++++..... . . . ...+....... .... .......+.. . .......+ ...+..
T Consensus 163 vl~~~~~~~~---~-~---~--~~~~~~~~~~~--~~~~------~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~ 221 (306)
T 2r11_A 163 AILSPAETFL---P-F---H--HDFYKYALGLT--ASNG------VETFLNWMMN---D-QNVLHPIFVKQFKAGVMWQD 221 (306)
T ss_dssp EEESCSSBTS---C-C---C--HHHHHHHHTTT--STTH------HHHHHHHHTT---T-CCCSCHHHHHHHHHHHHCCS
T ss_pred EEEcCccccC---c-c---c--HHHHHHHhHHH--HHHH------HHHHHHHhhC---C-ccccccccccccHHHHHHHH
Confidence 9999764321 0 0 0 01111111000 0000 0000111100 0 00010110 001110
Q ss_pred CCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhh-hhccCCCCccEEEcCCCCCCCCCCChhhH
Q 024900 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGR-AYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~-~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
....-. ..............+.++++|||+|+|++|.++|.+..+ .+.+..+++++.+++++||++++|+|+++
T Consensus 222 ~~~~~~-----~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~ 296 (306)
T 2r11_A 222 GSRNPN-----PNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQPTYV 296 (306)
T ss_dssp SSCCCC-----CCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHSTTCEEEEETTCCTTHHHHSHHHH
T ss_pred hhhhhh-----hhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHCCCCEEEEeCCCCCCCcccCHHHH
Confidence 000000 000000000112346789999999999999999987665 45545677999999999999999999999
Q ss_pred HHHHHHHHH
Q 024900 235 NPLVESFVT 243 (261)
Q Consensus 235 ~~~l~~fl~ 243 (261)
++.|.+||+
T Consensus 297 ~~~i~~fl~ 305 (306)
T 2r11_A 297 NERVMRFFN 305 (306)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999999985
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-27 Score=188.22 Aligned_cols=201 Identities=16% Similarity=0.181 Sum_probs=133.7
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH------HHhcCCCeEEEEcChhHHHHHHHHhh-C
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC------KDVVKDQAFFICNSIGGLVGLQAAVM-E 74 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~------~~l~~~~~~lvGhS~Gg~va~~~a~~-~ 74 (261)
.|+++|+|+++|+||||.|+.+ ..++++++++|+.+++ +.++ +++++||||||.+++.+|.. +
T Consensus 37 ~l~~g~~v~~~d~~g~g~s~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~ 106 (245)
T 3e0x_A 37 KYLEDYNCILLDLKGHGESKGQ--------CPSTVYGYIDNVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKL 106 (245)
T ss_dssp GGCTTSEEEEECCTTSTTCCSC--------CCSSHHHHHHHHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTC
T ss_pred HHHhCCEEEEecCCCCCCCCCC--------CCcCHHHHHHHHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhC
Confidence 3668999999999999999732 3479999999999999 8777 99999999999999999999 9
Q ss_pred cccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 024900 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (261)
Q Consensus 75 p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (261)
|+ |+++|++++..... .........+ ... ... ..+... .. .....+....+..
T Consensus 107 p~-v~~lvl~~~~~~~~------~~~~~~~~~~---~~~-~~~-~~~~~~------------~~---~~~~~~~~~~~~~ 159 (245)
T 3e0x_A 107 PN-VRKVVSLSGGARFD------KLDKDFMEKI---YHN-QLD-NNYLLE------------CI---GGIDNPLSEKYFE 159 (245)
T ss_dssp TT-EEEEEEESCCSBCT------TSCHHHHHHH---HTT-CCC-HHHHHH------------HH---TCSCSHHHHHHHT
T ss_pred cc-ccEEEEecCCCccc------cccHHHHHHH---HHH-HHH-hhcCcc------------cc---cccchHHHHHHHH
Confidence 99 99999999864321 0001111111 110 000 000000 00 0001111222211
Q ss_pred cCCCCchHHHHH-HHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhh
Q 024900 155 PGLETGAADVFL-EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 155 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
.... ....+. .+....... ..+.+.++++|+++|+|++|.++|.+..+.+.+..+++++++++++||+++.++|++
T Consensus 160 ~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 236 (245)
T 3e0x_A 160 TLEK--DPDIMINDLIACKLID-LVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKHFLLVVNAKG 236 (245)
T ss_dssp TSCS--SHHHHHHHHHHHHHCB-CGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEESSCGGGHHHHTHHH
T ss_pred HHhc--CcHHHHHHHHHhcccc-HHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCceEEEeCCCCcceEEecHHH
Confidence 1111 011111 111111111 134577899999999999999999888777776667789999999999999999999
Q ss_pred HHHHHHHHH
Q 024900 234 VNPLVESFV 242 (261)
Q Consensus 234 ~~~~l~~fl 242 (261)
+++.|.+||
T Consensus 237 ~~~~i~~fl 245 (245)
T 3e0x_A 237 VAEEIKNFI 245 (245)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhhC
Confidence 999999875
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-27 Score=191.11 Aligned_cols=190 Identities=21% Similarity=0.258 Sum_probs=128.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.+|+|+++|+||||.|+.+. ..+++..+++|+.++++.+. .++++|+||||||.+++.+|..+|++|++
T Consensus 55 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 127 (251)
T 2wtm_A 55 IGVATLRADMYGHGKSDGKF-------EDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKA 127 (251)
T ss_dssp TTCEEEEECCTTSTTSSSCG-------GGCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEE
T ss_pred CCCEEEEecCCCCCCCCCcc-------ccCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceE
Confidence 47999999999999997532 24789999999999998884 46899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++...... ....... .+.. +.....++.. . .+. ...........
T Consensus 128 lvl~~~~~~~~~-------------~~~~~~~---~~~~-~~~~~~~~~~----~-~~~-~~~~~~~~~~~--------- 175 (251)
T 2wtm_A 128 LIPLSPAAMIPE-------------IARTGEL---LGLK-FDPENIPDEL----D-AWD-GRKLKGNYVRV--------- 175 (251)
T ss_dssp EEEESCCTTHHH-------------HHHHTEE---TTEE-CBTTBCCSEE----E-ETT-TEEEETHHHHH---------
T ss_pred EEEECcHHHhHH-------------HHhhhhh---cccc-CCchhcchHH----h-hhh-ccccchHHHHH---------
Confidence 999986432110 0000000 0000 0000000000 0 000 00000000000
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
. .. ....+.+.++++|||+|+|++|.++|++.++.+.+..+++++++++++||++ .|+|+++++.+.+
T Consensus 176 -------~---~~-~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~ 243 (251)
T 2wtm_A 176 -------A---QT-IRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCY-DHHLELVTEAVKE 243 (251)
T ss_dssp -------H---TT-CCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEETTCCTTC-TTTHHHHHHHHHH
T ss_pred -------H---Hc-cCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCCCcEEEEECCCCccc-chhHHHHHHHHHH
Confidence 0 00 0111235678999999999999999998887776666789999999999999 9999999999999
Q ss_pred HHHhc
Q 024900 241 FVTRH 245 (261)
Q Consensus 241 fl~~~ 245 (261)
|++++
T Consensus 244 fl~~~ 248 (251)
T 2wtm_A 244 FMLEQ 248 (251)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99764
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=197.76 Aligned_cols=79 Identities=24% Similarity=0.398 Sum_probs=71.1
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||||.|..+.. ...|++.++++|+.++++.++.++++|+||||||.+++.+|..+|++|+++|++
T Consensus 53 ~g~~vi~~d~~g~g~s~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~ 127 (356)
T 2e3j_A 53 AGYRVVAIDQRGYGRSSKYRV-----QKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGI 127 (356)
T ss_dssp TTCEEEEECCTTSTTSCCCCS-----GGGGSHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEE
T ss_pred cCCEEEEEcCCCCCCCCCCCc-----ccccCHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEE
Confidence 479999999999999986531 124799999999999999999999999999999999999999999999999999
Q ss_pred ecch
Q 024900 85 NISL 88 (261)
Q Consensus 85 ~~~~ 88 (261)
+++.
T Consensus 128 ~~~~ 131 (356)
T 2e3j_A 128 SVPF 131 (356)
T ss_dssp SSCC
T ss_pred CCcc
Confidence 9764
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=183.59 Aligned_cols=203 Identities=18% Similarity=0.201 Sum_probs=132.4
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccc----c
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI----C 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~----v 78 (261)
|+++|+|+++|+||||.|..+. ..++++++++|+.++++.++.++++|+||||||.+++.+|..+|++ +
T Consensus 43 l~~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v 115 (267)
T 3fla_A 43 LAPAVEVLAVQYPGRQDRRHEP-------PVDSIGGLTNRLLEVLRPFGDRPLALFGHSMGAIIGYELALRMPEAGLPAP 115 (267)
T ss_dssp HTTTEEEEEECCTTSGGGTTSC-------CCCSHHHHHHHHHHHTGGGTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCC
T ss_pred hccCcEEEEecCCCCCCCCCCC-------CCcCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHhhhhhccccc
Confidence 6677999999999999997642 3579999999999999999899999999999999999999999987 9
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhh-hhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN-TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
+++|++++......... .........+...+.. ....... ... ++........
T Consensus 116 ~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~~~~~~~~~-- 169 (267)
T 3fla_A 116 VHLFASGRRAPSRYRDD--DVRGASDERLVAELRKLGGSDAAM---LAD-------------------PELLAMVLPA-- 169 (267)
T ss_dssp SEEEEESCCCTTCCCCS--CTTCCCHHHHHHHHHHTCHHHHHH---HHS-------------------HHHHHHHHHH--
T ss_pred cEEEECCCCccccccch--hhcccchHHHHHHHHHhcCcchhh---ccC-------------------HHHHHHHHHH--
Confidence 99999886532211100 0000001111111110 0000000 000 1111111000
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC-ccEEEcCCCCCCCCCCChhhHHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
....+.....+ .. .....+++|+++|+|++|.++|.+..+.+.+..++ .+++++++ ||+++.++|+++++
T Consensus 170 ---~~~~~~~~~~~---~~--~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~~~~~~~ 240 (267)
T 3fla_A 170 ---IRSDYRAVETY---RH--EPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLPG-GHFFLVDQAAPMIA 240 (267)
T ss_dssp ---HHHHHHHHHHC---CC--CTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEESS-STTHHHHTHHHHHH
T ss_pred ---HHHHHHhhhcc---cc--cccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEecC-CceeeccCHHHHHH
Confidence 00000001111 11 11267899999999999999998887777665555 89999998 99999999999999
Q ss_pred HHHHHHHhcCC
Q 024900 237 LVESFVTRHAT 247 (261)
Q Consensus 237 ~l~~fl~~~~~ 247 (261)
.|.+|+++...
T Consensus 241 ~i~~fl~~~~~ 251 (267)
T 3fla_A 241 TMTEKLAGPAL 251 (267)
T ss_dssp HHHHHTC----
T ss_pred HHHHHhccccc
Confidence 99999977544
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-26 Score=186.91 Aligned_cols=218 Identities=17% Similarity=0.219 Sum_probs=134.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||||.|+.+.. ...+++.++++|+.+++++++.++++++||||||.+++.+|..+|++|+++|++
T Consensus 52 ~G~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~ 126 (286)
T 3qit_A 52 QGYRVVAPDLFGHGRSSHLEM-----VTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILV 126 (286)
T ss_dssp TTCEEEEECCTTSTTSCCCSS-----GGGCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred cCeEEEEECCCCCCCCCCCCC-----CCCcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEe
Confidence 359999999999999986531 135799999999999999999999999999999999999999999999999999
Q ss_pred ecchhhhhhccCCCCCchhhHHHHHHhh---hhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC--
Q 024900 85 NISLRMLHIKKQPWYGRPLIRSFQNLLR---NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET-- 159 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 159 (261)
++......... ......+...+. ...... ............... .....++....+.......
T Consensus 127 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 194 (286)
T 3qit_A 127 ELPLPAEESKK-----ESAVNQLTTCLDYLSSTPQHP----IFPDVATAASRLRQA---IPSLSEEFSYILAQRITQPNQ 194 (286)
T ss_dssp SCCCCCCC--------CCHHHHHHHHHHHHTCCCCCC----CBSSHHHHHHHHHHH---STTSCHHHHHHHHHHTEEEET
T ss_pred cCCCCCccccc-----hhhhHHHHHHHHHHhcccccc----ccccHHHHHHHhhcC---CcccCHHHHHHHhhccccccc
Confidence 97643211100 011111111110 000000 000000000001111 1112233332221110000
Q ss_pred -------chHHHHHHHHhhcCC----CCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 160 -------GAADVFLEFICYSGG----PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 160 -------~~~~~~~~~~~~~~~----~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
............... ....+.+.++++||++|+|++|.++|.+..+.+.+..++++++++++ ||++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~ 273 (286)
T 3qit_A 195 GGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFLSG-GHNLHI 273 (286)
T ss_dssp TEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHSTTSEEEEESS-SSCHHH
T ss_pred cceeeeechhhhccccccccccccchhHHHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHCCCCeEEEeeC-CchHhh
Confidence 000000000000000 00012356789999999999999999988777777677889999999 999999
Q ss_pred CChhhHHHHHHH
Q 024900 229 EAPHLVNPLVES 240 (261)
Q Consensus 229 e~p~~~~~~l~~ 240 (261)
|+|++|++.|.+
T Consensus 274 e~p~~~~~~i~~ 285 (286)
T 3qit_A 274 DAAAALASLILT 285 (286)
T ss_dssp HTHHHHHHHHHC
T ss_pred hChHHHHHHhhc
Confidence 999999998863
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-25 Score=191.56 Aligned_cols=232 Identities=12% Similarity=0.113 Sum_probs=132.3
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEee
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 85 (261)
+|+|+++|+||||.|+.+.. ..+++.++++++.++++.++.++++++||||||.|++.+|..+|++|+++|+++
T Consensus 128 ~~~vi~~dl~G~G~S~~~~~------~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (388)
T 4i19_A 128 AFHLVIPSLPGFGLSGPLKS------AGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNL 201 (388)
T ss_dssp CEEEEEECCTTSGGGCCCSS------CCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESS
T ss_pred CeEEEEEcCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEec
Confidence 89999999999999987641 258999999999999999999999999999999999999999999999999998
Q ss_pred cchhhhhhcc-CCCCCchhhHHHHH---Hhhhhh---------hhHHHHHhhcChHHHHHHHHh---hcCCC-----CCC
Q 024900 86 ISLRMLHIKK-QPWYGRPLIRSFQN---LLRNTA---------AGKLFYKMVATSESVRNILCQ---CYNDT-----SQV 144 (261)
Q Consensus 86 ~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~ 144 (261)
+......... ...........+.. ...... ....-+....++......+.. .+.+. ..+
T Consensus 202 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~ 281 (388)
T 4i19_A 202 LQTNLSGEPGELETLSDADKARLAVSERFLDDLSGPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAV 281 (388)
T ss_dssp CCCCBCCCGGGGGGCCHHHHHHHHTHHHHHHHTCHHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTS
T ss_pred CCCCCCCcccccccCCHHHHHHHHHHHHHHHcCChHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 6432211000 00000000001110 000000 000000001111111111111 11111 112
Q ss_pred cHH-HHHHHhccCCCCchHHHHHHHHhhc--CCC-CccccCCCCCCCEEEEecCCCCCCCchh-hhhhccCCCCccEEEc
Q 024900 145 TEE-LVEKILQPGLETGAADVFLEFICYS--GGP-LPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVEDFIVL 219 (261)
Q Consensus 145 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~l~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~i 219 (261)
+.+ .+..................+.... ... .....+..|++||++++|.+|.+.++.. .+.. ..+..++.++
T Consensus 282 ~~d~ll~~~~~y~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~i~vP~~v~~g~~D~~~~p~~~~~~~--~~~~~~~~~~ 359 (388)
T 4i19_A 282 DRDLMLTHISLFWFTATGGSAAQAHYELKPFLPITSLIGRSPTLDVPMGVAVYPGALFQPVRSLAERD--FKQIVHWAEL 359 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHTGGGCTTTCCBCCCCCBCSCEEEEECTBCSSCCCHHHHHHH--BTTEEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHhhcccccccccccCCCCCCCEEEEeCCcccccccHHHHHHh--CCCeEEEEEC
Confidence 222 1111100000011111111111111 110 0122567899999999999996555443 2222 1244678889
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 220 PNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 220 ~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
+++||++++|+|++|++.|++|+++.
T Consensus 360 ~~gGHf~~~E~Pe~~~~~l~~fl~~~ 385 (388)
T 4i19_A 360 DRGGHFSAMEEPDLFVDDLRTFNRTL 385 (388)
T ss_dssp SSCBSSHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCcCccchhcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999763
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.6e-26 Score=186.74 Aligned_cols=219 Identities=15% Similarity=0.205 Sum_probs=131.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC----CeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD----QAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~----~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.+|+|+++|+||||.|+.+.. ..+++.++++|+.++++.+..+ +++++||||||.+++.+|..+|++|++
T Consensus 68 ~g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~ 141 (303)
T 3pe6_A 68 LDLLVFAHDHVGHGQSEGERM------VVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAG 141 (303)
T ss_dssp TTEEEEEECCTTSTTSCSSTT------CCSSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSE
T ss_pred CCCcEEEeCCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccE
Confidence 379999999999999986431 3468899999999999887654 899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC-C
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE-T 159 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 159 (261)
+|++++...... .....+....... . ..+........ ....+ ..........+...... .
T Consensus 142 lvl~~~~~~~~~---------~~~~~~~~~~~~~-~-~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~ 202 (303)
T 3pe6_A 142 MVLISPLVLANP---------ESATTFKVLAAKV-L-NSVLPNLSSGP-----IDSSV---LSRNKTEVDIYNSDPLICR 202 (303)
T ss_dssp EEEESCSSSBCH---------HHHHHHHHHHHHH-H-HTTCCSCCCCC-----CCGGG---TCSCHHHHHHHHTCTTSCC
T ss_pred EEEECccccCch---------hccHHHHHHHHHH-H-HHhcccccCCc-----cchhh---hhcchhHHHHhccCccccc
Confidence 999987543210 0000111000000 0 00000000000 00000 00011122221111000 0
Q ss_pred --chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC--CccEEEcCCCCCCCCCCChhhHH
Q 024900 160 --GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
............. ....+.+.++++||++|+|++|.+++.+..+.+.+..+ +.++++++++||+++.++|++++
T Consensus 203 ~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 280 (303)
T 3pe6_A 203 AGLKVCFGIQLLNAV--SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTN 280 (303)
T ss_dssp SCCCHHHHHHHHHHH--HHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHH
T ss_pred cchhhhhHHHHHHHH--HHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHH
Confidence 0000111110000 00123467889999999999999999887776665444 68999999999999999998777
Q ss_pred HH---HHHHHHhcCCCCC
Q 024900 236 PL---VESFVTRHATPPA 250 (261)
Q Consensus 236 ~~---l~~fl~~~~~~~~ 250 (261)
++ +.+|++++...+.
T Consensus 281 ~~~~~~~~~l~~~~~~~~ 298 (303)
T 3pe6_A 281 SVFHEINMWVSQRTATAG 298 (303)
T ss_dssp HHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHhccCCCCC
Confidence 66 5566777655433
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-24 Score=186.60 Aligned_cols=238 Identities=16% Similarity=0.133 Sum_probs=135.2
Q ss_pred cCC-CCeEEEecCCCCCCCCCCC---CCCCCCCCCCCHHHHHH-HHHHHHH----HhcCCCeEEEEcChhHHHHHHHHhh
Q 024900 3 LAK-SHRVYSIDLIGYGYSDKPN---PRDFFDKPFYTFETWAS-QLNDFCK----DVVKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 3 L~~-~~~V~~~Dl~G~G~S~~~~---~~~~~~~~~~~~~~~a~-dl~~~~~----~l~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
|++ +|+|+++|+||||.|+.+. +.. .....|++.++++ |+.++++ .++.++++|+||||||.+++.+|..
T Consensus 87 l~~~G~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 165 (377)
T 1k8q_A 87 LADAGYDVWLGNSRGNTWARRNLYYSPDS-VEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFST 165 (377)
T ss_dssp HHHTTCEEEECCCTTSTTSCEESSSCTTS-TTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHH
T ss_pred HHHCCCCEEEecCCCCCCCCCCCCCCCCc-ccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhc
Confidence 443 5999999999999998521 100 0001579999998 8877654 5678899999999999999999999
Q ss_pred Ccc---cccceEEeecchhhhhhccCCCCCchhh----HHHHHHhhh------hhhhHHHHHhhcC----hHHHHHHHHh
Q 024900 74 EPE---ICRGMILLNISLRMLHIKKQPWYGRPLI----RSFQNLLRN------TAAGKLFYKMVAT----SESVRNILCQ 136 (261)
Q Consensus 74 ~p~---~v~~lv~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~~~~~~~~~~~~----~~~~~~~~~~ 136 (261)
+|+ +|+++|++++........ .+. +... ..+...... ......+...... .......+..
T Consensus 166 ~p~~~~~v~~lvl~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (377)
T 1k8q_A 166 NPKLAKRIKTFYALAPVATVKYTE-TLI--NKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFI 242 (377)
T ss_dssp CHHHHTTEEEEEEESCCSCCSSCC-SGG--GGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHH
T ss_pred CchhhhhhhEEEEeCCchhcccch-hHH--HHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHH
Confidence 999 899999999754321100 000 0000 000000000 0000000000000 0000000000
Q ss_pred hcC-CCCCCcHHHHHHHhccCCCCchHHHHH---H------------------HHhhcCCCCccccCCCCCCCEEEEecC
Q 024900 137 CYN-DTSQVTEELVEKILQPGLETGAADVFL---E------------------FICYSGGPLPEELLPQVKCPVLIAWGD 194 (261)
Q Consensus 137 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------~~~~~~~~~~~~~l~~i~~Pvlii~G~ 194 (261)
... +.....++.+..+.............. . ...+.........+.+|++|||+|+|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 322 (377)
T 1k8q_A 243 ICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGG 322 (377)
T ss_dssp HHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEET
T ss_pred hcCCCcccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeC
Confidence 000 001111222222211100000000000 0 000110011123478899999999999
Q ss_pred CCCCCCchhhhhhccCCCCcc-EEEcCCCCCCCCC---CChhhHHHHHHHHHHh
Q 024900 195 KDPWEPIELGRAYGNFDSVED-FIVLPNVGHCPQD---EAPHLVNPLVESFVTR 244 (261)
Q Consensus 195 ~D~~~~~~~~~~~~~~~~~~~-~~~i~~~gH~~~~---e~p~~~~~~l~~fl~~ 244 (261)
+|.++|++..+.+.+..++++ +++++++||++++ ++|+++++.|.+||++
T Consensus 323 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 323 NDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp TCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred CCcccCHHHHHHHHHhCcCcccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 999999988877777777776 9999999999996 9999999999999975
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-25 Score=187.67 Aligned_cols=215 Identities=15% Similarity=0.180 Sum_probs=131.4
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC----CeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD----QAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~----~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.+|+|+++|+||||.|+.+.. ..+++.++++|+.++++.+..+ +++|+||||||.+++.+|..+|++|++
T Consensus 86 ~g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~ 159 (342)
T 3hju_A 86 LDLLVFAHDHVGHGQSEGERM------VVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAG 159 (342)
T ss_dssp TTEEEEEECCTTSTTSCSSTT------CCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSE
T ss_pred CCCeEEEEcCCCCcCCCCcCC------CcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccce
Confidence 479999999999999986432 3468899999999999887654 899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC--
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE-- 158 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 158 (261)
+|++++...... .....+.......... +........ ....+ .....+....+......
T Consensus 160 lvl~~~~~~~~~-----~~~~~~~~~~~~~~~~------~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~ 220 (342)
T 3hju_A 160 MVLISPLVLANP-----ESATTFKVLAAKVLNL------VLPNLSLGP-----IDSSV---LSRNKTEVDIYNSDPLICR 220 (342)
T ss_dssp EEEESCCCSCCT-----TTTSHHHHHHHHHHHH------HCTTCBCCC-----CCGGG---SCSCHHHHHHHHTCTTCCC
T ss_pred EEEECcccccch-----hhhhHHHHHHHHHHHH------hccccccCc-----ccccc---cccchHHHHHHhcCccccc
Confidence 999997643210 0001111111111000 000000000 00000 00111222222111000
Q ss_pred -CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC--CccEEEcCCCCCCCCCCChhhHH
Q 024900 159 -TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
.........+.... ....+.+.+|++|||+|+|++|.+++.+..+.+.+..+ +.++++++++||+++.++|++++
T Consensus 221 ~~~~~~~~~~~~~~~--~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 298 (342)
T 3hju_A 221 AGLKVCFGIQLLNAV--SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTN 298 (342)
T ss_dssp SCCBHHHHHHHHHHH--HHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHH
T ss_pred ccccHHHHHHHHHHH--HHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHH
Confidence 00011111111000 00123467889999999999999999887766655444 68999999999999999998777
Q ss_pred HH---HHHHHHhcC
Q 024900 236 PL---VESFVTRHA 246 (261)
Q Consensus 236 ~~---l~~fl~~~~ 246 (261)
++ +.+||+++.
T Consensus 299 ~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 299 SVFHEINMWVSQRT 312 (342)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc
Confidence 66 556666543
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.2e-26 Score=189.11 Aligned_cols=202 Identities=14% Similarity=0.156 Sum_probs=126.9
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc-cccceEEe
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILL 84 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lv~~ 84 (261)
+|+|+++|+||||.|..+. .++++++++++.++++.+ .++++|+||||||.+++.+|..+|+ +|+++|++
T Consensus 65 g~~vi~~D~~G~G~s~~~~--------~~~~~~~~~~l~~~~~~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~ 135 (302)
T 1pja_A 65 GTVVTVLDLFDGRESLRPL--------WEQVQGFREAVVPIMAKA-PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISL 135 (302)
T ss_dssp TCCEEECCSSCSGGGGSCH--------HHHHHHHHHHHHHHHHHC-TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEE
T ss_pred CcEEEEeccCCCccchhhH--------HHHHHHHHHHHHHHhhcC-CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEE
Confidence 6999999999999997542 257889999999988887 7899999999999999999999999 79999999
Q ss_pred ecchhhhhhccCCCCCchhhHHHHHHhhhh---hhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNT---AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
+++..... . .... +....... .....++...... ......+.+ ....+..... .
T Consensus 136 ~~~~~~~~--~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~--~------- 192 (302)
T 1pja_A 136 SSPQMGQY--G----DTDY---LKWLFPTSMRSNLYRICYSPWGQE----FSICNYWHD-PHHDDLYLNA--S------- 192 (302)
T ss_dssp SCCTTCBC--S----CCHH---HHHHCTTCCHHHHHHHHTSTTGGG----STGGGGBCC-TTCHHHHHHH--C-------
T ss_pred CCCccccc--c----cchh---hhhHHHHHHHHHHhhccchHHHHH----hhhhhcccC-hhhhhhhhcc--c-------
Confidence 97643210 0 0011 11000000 0000000000000 000000100 0000111000 0
Q ss_pred HHHHHHHHhhcCCCC----ccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC------------------------
Q 024900 162 ADVFLEFICYSGGPL----PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV------------------------ 213 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~----~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------------------------ 213 (261)
.+........... ..+.+.+++ ||++|+|++|.++|++.++.+.+..++
T Consensus 193 --~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (302)
T 1pja_A 193 --SFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLA 269 (302)
T ss_dssp --SSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHHTTTTSHHHHHH
T ss_pred --hHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhhhhhhhchhhHhh
Confidence 0000000000000 123467899 999999999999998887777655554
Q ss_pred ---ccEEEcCCCCCCCCCCChhhHHHHHHHHH
Q 024900 214 ---EDFIVLPNVGHCPQDEAPHLVNPLVESFV 242 (261)
Q Consensus 214 ---~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 242 (261)
+++++++++||+++.|+|++|++.|.+|+
T Consensus 270 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 270 RGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp TTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred cCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 89999999999999999999999999886
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-25 Score=191.91 Aligned_cols=232 Identities=16% Similarity=0.177 Sum_probs=138.6
Q ss_pred CC---eEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCC--eEEEEcChhHHHHHHHHhhCcc
Q 024900 6 SH---RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQ--AFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 6 ~~---~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~----~~~--~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
+| +|+++|+||||.|+.+.... ....+++.++++|+.++++.+. ..+ ++|+||||||.+++.+|..+|+
T Consensus 83 G~~~~~vi~~D~~G~G~S~~~~~~~--~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 160 (398)
T 2y6u_A 83 NYAIDKVLLIDQVNHGDSAVRNRGR--LGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPN 160 (398)
T ss_dssp TEEEEEEEEECCTTSHHHHHHTTTT--BCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTT
T ss_pred CcceeEEEEEcCCCCCCCCCCCccc--cCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCch
Confidence 57 99999999999997542100 0135899999999999998855 445 9999999999999999999999
Q ss_pred cccceEEeecchhhhhh-----ccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHh-hcCCCCCCcHHHHH
Q 024900 77 ICRGMILLNISLRMLHI-----KKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDTSQVTEELVE 150 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 150 (261)
+|+++|++++....... ...+.........+...+.... . ............+.. .+. ...+++.++
T Consensus 161 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 233 (398)
T 2y6u_A 161 LFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKT-C----DHFANESEYVKYMRNGSFF--TNAHSQILQ 233 (398)
T ss_dssp SCSEEEEESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTC-C----CEESSHHHHHHHHHHTSTT--TTSCHHHHH
T ss_pred heeEEEEeccccccccccccccccccccccccchhhHHHhhhhc-c----ccCCCHHHHHHHhhcCccc--ccCCHHHHH
Confidence 99999999986542100 0000000000011111110000 0 000111111111111 111 112233332
Q ss_pred HHhccCC-------------C--CchHHHHHHHHhhc-CCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCc
Q 024900 151 KILQPGL-------------E--TGAADVFLEFICYS-GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE 214 (261)
Q Consensus 151 ~~~~~~~-------------~--~~~~~~~~~~~~~~-~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~ 214 (261)
.+..... . .........+.... ......+.+.+|++|||+|+|++|.++|++..+.+.+..+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~~ 313 (398)
T 2y6u_A 234 NIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNY 313 (398)
T ss_dssp HHHHHHEEC--------CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCSSE
T ss_pred HHHHhcCccccccccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCCCc
Confidence 2211000 0 00000000000000 000011346789999999999999999998877777767789
Q ss_pred cEEEcCCCCCCCCCCChhhHHHHHHHHHHhcC
Q 024900 215 DFIVLPNVGHCPQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 215 ~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~ 246 (261)
++++++++||+++.|+|+++++.|.+|+++..
T Consensus 314 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 345 (398)
T 2y6u_A 314 HLDVIPGGSHLVNVEAPDLVIERINHHIHEFV 345 (398)
T ss_dssp EEEEETTCCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCCccchhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997643
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=177.11 Aligned_cols=195 Identities=13% Similarity=0.082 Sum_probs=131.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhh---Cc---cc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM---EP---EI 77 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~---~p---~~ 77 (261)
+.+|+|+++|+||||.|..+. ..++++++++|+.++++.++.++++|+||||||.+++.+|.. +| ++
T Consensus 64 ~~g~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~ 136 (270)
T 3llc_A 64 SLGVGAIRFDYSGHGASGGAF-------RDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQ 136 (270)
T ss_dssp HHTCEEEEECCTTSTTCCSCG-------GGCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCE
T ss_pred hCCCcEEEeccccCCCCCCcc-------ccccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccc
Confidence 457999999999999997642 347999999999999999999999999999999999999999 99 99
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcC-CCCCCcHHHHHHHhccC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN-DTSQVTEELVEKILQPG 156 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 156 (261)
|+++|++++......... + ..+.... ...+...... ...... ...
T Consensus 137 v~~~il~~~~~~~~~~~~--~--~~~~~~~----------------------~~~~~~~~~~~~~~~~~--------~~~ 182 (270)
T 3llc_A 137 VSGMVLIAPAPDFTSDLI--E--PLLGDRE----------------------RAELAENGYFEEVSEYS--------PEP 182 (270)
T ss_dssp EEEEEEESCCTTHHHHTT--G--GGCCHHH----------------------HHHHHHHSEEEECCTTC--------SSC
T ss_pred cceeEEecCcccchhhhh--h--hhhhhhh----------------------hhhhhccCcccChhhcc--------cch
Confidence 999999998643321000 0 0000000 0000000000 000000 000
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC--ccEEEcCCCCCCCC-CCChhh
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV--EDFIVLPNVGHCPQ-DEAPHL 233 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~-~e~p~~ 233 (261)
. ............. .....+.++++|+++|+|++|.++|.+..+.+.+..++ .++++++++||+.. .+.+++
T Consensus 183 ~-~~~~~~~~~~~~~----~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 257 (270)
T 3llc_A 183 N-IFTRALMEDGRAN----RVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDR 257 (270)
T ss_dssp E-EEEHHHHHHHHHT----CCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHH
T ss_pred h-HHHHHHHhhhhhh----hhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHH
Confidence 0 0000011111111 11345788999999999999999998887776665555 89999999999644 578899
Q ss_pred HHHHHHHHHHh
Q 024900 234 VNPLVESFVTR 244 (261)
Q Consensus 234 ~~~~l~~fl~~ 244 (261)
+.+.|.+||++
T Consensus 258 ~~~~i~~fl~~ 268 (270)
T 3llc_A 258 MRNAIRAMIEP 268 (270)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHhcC
Confidence 99999999975
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=187.61 Aligned_cols=234 Identities=12% Similarity=0.046 Sum_probs=128.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC-CeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
.+|+||++|+||||.|+.+.. ...++++++++++.++++.++.+ +++++||||||.|++.+|.++|+.+..++.
T Consensus 141 ~gf~vv~~DlpG~G~S~~~~~-----~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~ 215 (408)
T 3g02_A 141 LPFHLVVPSLPGYTFSSGPPL-----DKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLN 215 (408)
T ss_dssp CCEEEEEECCTTSTTSCCSCS-----SSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEES
T ss_pred CceEEEEECCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEe
Confidence 368999999999999987531 13589999999999999999997 999999999999999999999775555544
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhh--hhhhhHHH----------HHhhcChHHHHHHHHh---hcCCCCCCc-HH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLR--NTAAGKLF----------YKMVATSESVRNILCQ---CYNDTSQVT-EE 147 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~---~~~~~~~~~-~~ 147 (261)
+.+....................+..... ....+... +....++......+.. .|.+. ..+ ++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~-~~~~d~ 294 (408)
T 3g02_A 216 FCNMSAPPEGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDK-PLPSET 294 (408)
T ss_dssp CCCCCCCTTCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSS-CCCHHH
T ss_pred CCCCCCCcccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCC-CCCHHH
Confidence 43322110000000000000111111100 00000000 0001111111111111 12221 122 22
Q ss_pred HHHHHhccCCCCc---hHHHHHHHHhhcCCCC--c---cccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEc
Q 024900 148 LVEKILQPGLETG---AADVFLEFICYSGGPL--P---EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVL 219 (261)
Q Consensus 148 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~---~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i 219 (261)
.+.......+... ....+.+.. ..... . ...+..|++||++++|.+|.+.++... .....+..++..+
T Consensus 295 ll~~v~~y~~t~~~~~s~~~y~e~~--~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~~~--~~~~~~~~~~~~~ 370 (408)
T 3g02_A 295 ILEMVSLYWLTESFPRAIHTYREWV--PTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPRSW--IATTGNLVFFRDH 370 (408)
T ss_dssp HHHHHHHHHHTTHHHHHGGGHHHHT--TC-------CTTTTTTCEEEEEEEEECTBSSSCCCHHH--HGGGEEEEEEEEC
T ss_pred HHHHHHHHHhhccchhHHHHHHhhc--ccccccccccccccCCCcCCCEEEEeCCcccccCcHHH--HHhcCCeeEEEEC
Confidence 2221111000000 001111110 00000 0 014678999999999999976665532 2222445788999
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHhcCCC
Q 024900 220 PNVGHCPQDEAPHLVNPLVESFVTRHATP 248 (261)
Q Consensus 220 ~~~gH~~~~e~p~~~~~~l~~fl~~~~~~ 248 (261)
+++||++++|+|++|++.|++|+.+....
T Consensus 371 ~~gGHf~~lE~Pe~~~~~l~~fl~~~~~~ 399 (408)
T 3g02_A 371 AEGGHFAALERPRELKTDLTAFVEQVWQK 399 (408)
T ss_dssp SSCBSCHHHHCHHHHHHHHHHHHHHHC--
T ss_pred CCCcCchhhhCHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999876543
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=182.26 Aligned_cols=189 Identities=13% Similarity=0.080 Sum_probs=111.7
Q ss_pred cC-CCCeEEEecCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 3 LA-KSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
|+ .+|+|+++|+||| |.|+.+. ..|+++++++|+.++++.+ +.++++|+||||||.||+.+|.. | +
T Consensus 58 L~~~G~~Vi~~D~rGh~G~S~~~~-------~~~~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~ 128 (305)
T 1tht_A 58 LSTNGFHVFRYDSLHHVGLSSGSI-------DEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-E 128 (305)
T ss_dssp HHTTTCCEEEECCCBCC---------------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-C
T ss_pred HHHCCCEEEEeeCCCCCCCCCCcc-------cceehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-C
Confidence 44 4799999999999 9997542 3478999999998887765 77899999999999999999998 7 8
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCC-cHHHHHHHhccC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV-TEELVEKILQPG 156 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 156 (261)
|+++|++++..... ............... ....... + .+. .... ...+........
T Consensus 129 v~~lvl~~~~~~~~-------------~~~~~~~~~~~~~~~-~~~~~~~------~--~~~-~~~~~~~~~~~~~~~~~ 185 (305)
T 1tht_A 129 LSFLITAVGVVNLR-------------DTLEKALGFDYLSLP-IDELPND------L--DFE-GHKLGSEVFVRDCFEHH 185 (305)
T ss_dssp CSEEEEESCCSCHH-------------HHHHHHHSSCGGGSC-GGGCCSE------E--EET-TEEEEHHHHHHHHHHTT
T ss_pred cCEEEEecCchhHH-------------HHHHHHhhhhhhhcc-hhhCccc------c--ccc-ccccCHHHHHHHHHhcc
Confidence 99999987532110 000000000000000 0000000 0 000 0000 011111111000
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC--CCccEEEcCCCCCCCCCCChhhH
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD--SVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
.. .. . ...+.+++|++|||+|+|++|.++|++.++.+.+.. +++++++++++||.++ |+|+.+
T Consensus 186 ~~-~~-~------------~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~ 250 (305)
T 1tht_A 186 WD-TL-D------------STLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVL 250 (305)
T ss_dssp CS-SH-H------------HHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHH
T ss_pred cc-ch-h------------hHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHH
Confidence 00 00 0 011346789999999999999999998877766543 5689999999999997 899865
Q ss_pred HHHH
Q 024900 235 NPLV 238 (261)
Q Consensus 235 ~~~l 238 (261)
.+.+
T Consensus 251 ~~fl 254 (305)
T 1tht_A 251 RNFY 254 (305)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-25 Score=180.51 Aligned_cols=191 Identities=16% Similarity=0.198 Sum_probs=131.1
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.+|+|+++|+||||.|..+. ..+++.++++|+.++++.+ +.++++|+||||||.+++.+|..+|++|++
T Consensus 74 ~G~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~ 146 (270)
T 3pfb_A 74 ENIASVRFDFNGHGDSDGKF-------ENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKK 146 (270)
T ss_dssp TTCEEEEECCTTSTTSSSCG-------GGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEE
T ss_pred CCcEEEEEccccccCCCCCC-------CccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcE
Confidence 56999999999999998642 3478999999999999988 567999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++....... ....... . ....+ ...... ... ....
T Consensus 147 ~v~~~~~~~~~~~------------~~~~~~~----~-----~~~~~--------------~~~~~~-----~~~-~~~~ 185 (270)
T 3pfb_A 147 VVLLAPAATLKGD------------ALEGNTQ----G-----VTYNP--------------DHIPDR-----LPF-KDLT 185 (270)
T ss_dssp EEEESCCTHHHHH------------HHHTEET----T-----EECCT--------------TSCCSE-----EEE-TTEE
T ss_pred EEEeccccccchh------------hhhhhhh----c-----cccCc--------------cccccc-----ccc-cccc
Confidence 9999976432110 0000000 0 00000 000000 000 0000
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
....+...... ....+.+.++++|+++|+|++|.++|.+..+.+.+..+++++++++++||.++.++|+++++.|.+
T Consensus 186 ~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 262 (270)
T 3pfb_A 186 LGGFYLRIAQQ---LPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTTD 262 (270)
T ss_dssp EEHHHHHHHHH---CCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEETTCCTTCCTHHHHHHHHHHHH
T ss_pred cchhHhhcccc---cCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCCCCeEEEcCCCCcccCccchHHHHHHHHH
Confidence 00001000000 011234678899999999999999999887777666777899999999999999999999999999
Q ss_pred HHHhcC
Q 024900 241 FVTRHA 246 (261)
Q Consensus 241 fl~~~~ 246 (261)
||++..
T Consensus 263 fl~~~~ 268 (270)
T 3pfb_A 263 FLQNNN 268 (270)
T ss_dssp HHC---
T ss_pred HHhhcC
Confidence 998753
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-24 Score=177.08 Aligned_cols=199 Identities=13% Similarity=0.087 Sum_probs=125.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-cCCCeEEEEcChhHHHHHHHHhhCccccc-
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVMEPEICR- 79 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-~~~~~~lvGhS~Gg~va~~~a~~~p~~v~- 79 (261)
.|+++|+|+++|+||||.|..+. ..+++.++++++.++++.+ +.++++|+||||||.+|+.+|..+|+++.
T Consensus 73 ~L~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~a~~~~~~l~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~ 145 (280)
T 3qmv_A 73 RLGDEVAVVPVQLPGRGLRLRER-------PYDTMEPLAEAVADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRGAP 145 (280)
T ss_dssp HHCTTEEEEECCCTTSGGGTTSC-------CCCSHHHHHHHHHHHHHHTTCSSSEEEEEETHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCCceEEEEeCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCHhHHHHHHHHHHHHHcCCC
Confidence 36779999999999999997542 3579999999999999999 78899999999999999999999999988
Q ss_pred ---ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 80 ---GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 80 ---~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
.++++++...... ............+...+ ....... ...... +.
T Consensus 146 ~~~~l~l~~~~~p~~~--~~~~~~~~~~~~~~~~~-----------------------~~~~~~~----~~~~~~---~~ 193 (280)
T 3qmv_A 146 RPRHLFVSGSRAPHLY--GDRADHTLSDTALREVI-----------------------RDLGGLD----DADTLG---AA 193 (280)
T ss_dssp CCSCEEEESCCCGGGC--SCCCGGGSCHHHHHHHH-----------------------HHHTCCC---------------
T ss_pred CceEEEEECCCCCCCc--CcccccccCHHHHHHHH-----------------------HHhCCCC----hhhhcC---HH
Confidence 7777665332110 00000000000000000 0000000 000000 00
Q ss_pred CCCchHHHHH-HHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC-ccEEEcCCCCCCCCC--CChh
Q 024900 157 LETGAADVFL-EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQD--EAPH 232 (261)
Q Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~--e~p~ 232 (261)
........+. ++....... ...+..+++|||+|+|++|.+++.+..+.+.+..++ .++++++ +||++++ ++|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-ggH~~~~~~~~~~ 270 (280)
T 3qmv_A 194 YFDRRLPVLRADLRACERYD--WHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLP-GNHFFLNGGPSRD 270 (280)
T ss_dssp -CCTTHHHHHHHHHHHHTCC--CCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEE-EETTGGGSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc--ccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEec-CCCeEEcCchhHH
Confidence 0000001111 111111111 223678999999999999999998877766665554 4666666 5999999 9999
Q ss_pred hHHHHHHHHH
Q 024900 233 LVNPLVESFV 242 (261)
Q Consensus 233 ~~~~~l~~fl 242 (261)
++++.|.+||
T Consensus 271 ~~~~~i~~~L 280 (280)
T 3qmv_A 271 RLLAHLGTEL 280 (280)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhhC
Confidence 9999998874
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-24 Score=170.59 Aligned_cols=196 Identities=15% Similarity=0.140 Sum_probs=128.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
.+|+|+++|+||||.|+..... ..++++++++|+.++++.+... +++++||||||.+++.+|..+|+.+++++
T Consensus 48 ~G~~v~~~d~~g~g~s~~~~~~-----~~~~~~~~~~d~~~~i~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i 122 (251)
T 3dkr_A 48 SGYGVYVPLFSGHGTVEPLDIL-----TKGNPDIWWAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGV 122 (251)
T ss_dssp TTCEEEECCCTTCSSSCTHHHH-----HHCCHHHHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHCSSCCEEEE
T ss_pred CCCEEEecCCCCCCCCChhhhc-----CcccHHHHHHHHHHHHHHHHHhcCCeEEEEechHHHHHHHHHHhCccceeeEE
Confidence 5799999999999999643210 1138899999999999888765 99999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
++++..... ..... ...... ..+... ..... ..+.+...... ..
T Consensus 123 ~~~p~~~~~--------~~~~~-~~~~~~------~~~~~~--------------~~~~~--~~~~~~~~~~~-----~~ 166 (251)
T 3dkr_A 123 FSSPILPGK--------HHLVP-GFLKYA------EYMNRL--------------AGKSD--ESTQILAYLPG-----QL 166 (251)
T ss_dssp SSCCCCTTC--------BCHHH-HHHHHH------HHHHHH--------------HTCCC--CHHHHHHHHHH-----HH
T ss_pred Eecchhhcc--------chhhH-HHHHHH------HHHHhh--------------cccCc--chhhHHhhhHH-----HH
Confidence 888653211 01111 010000 000000 00000 01111111000 00
Q ss_pred HHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC---CccEEEcCCCCCCCCCCC-hhhHHHHH
Q 024900 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS---VEDFIVLPNVGHCPQDEA-PHLVNPLV 238 (261)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~-p~~~~~~l 238 (261)
..+...... ....+.++++|+|+|+|++|.+++.+..+.+.+..+ +.++++++++||+++.+. |+++.+.+
T Consensus 167 ~~~~~~~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i 241 (251)
T 3dkr_A 167 AAIDQFATT-----VAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDV 241 (251)
T ss_dssp HHHHHHHHH-----HHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHH
T ss_pred HHHHHHHHH-----HhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHH
Confidence 000011000 123456789999999999999999887766554333 348999999999999886 99999999
Q ss_pred HHHHHhcC
Q 024900 239 ESFVTRHA 246 (261)
Q Consensus 239 ~~fl~~~~ 246 (261)
.+|+++..
T Consensus 242 ~~fl~~~~ 249 (251)
T 3dkr_A 242 IAFMQQEN 249 (251)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhhc
Confidence 99998754
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=163.63 Aligned_cols=148 Identities=22% Similarity=0.335 Sum_probs=124.7
Q ss_pred CCCeEEEecCCCCCCC---CCCCCCCCCCCCCC-CHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 5 KSHRVYSIDLIGYGYS---DKPNPRDFFDKPFY-TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S---~~~~~~~~~~~~~~-~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.+|+|+++|+||+|.| +.+. ..+ +++++++++..+++.++.++++++|||+||.+++.+|..+|+++++
T Consensus 55 ~G~~v~~~d~~g~g~s~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~ 127 (207)
T 3bdi_A 55 IGYNVYAPDYPGFGRSASSEKYG-------IDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDG 127 (207)
T ss_dssp TTEEEEEECCTTSTTSCCCTTTC-------CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEE
T ss_pred CCCeEEEEcCCcccccCcccCCC-------CCcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheE
Confidence 4599999999999999 5442 346 8999999999999999999999999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++.... .+
T Consensus 128 ~v~~~~~~~~-----------~~--------------------------------------------------------- 139 (207)
T 3bdi_A 128 IIAVAPAWVE-----------SL--------------------------------------------------------- 139 (207)
T ss_dssp EEEESCCSCG-----------GG---------------------------------------------------------
T ss_pred EEEeCCcccc-----------ch---------------------------------------------------------
Confidence 9999864110 00
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
...+.++++|+++++|++|.+++.+..+.+.+..++.++.+++++||..+.++|+++.+.+.+
T Consensus 140 -----------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~ 202 (207)
T 3bdi_A 140 -----------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITVD 202 (207)
T ss_dssp -----------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred -----------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcCCceEEEeCCCCCCccccCHHHHHHHHHH
Confidence 001234679999999999999998877766655567899999999999999999999999999
Q ss_pred HHHh
Q 024900 241 FVTR 244 (261)
Q Consensus 241 fl~~ 244 (261)
|+++
T Consensus 203 fl~~ 206 (207)
T 3bdi_A 203 FLRN 206 (207)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9975
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-24 Score=176.24 Aligned_cols=198 Identities=16% Similarity=0.167 Sum_probs=128.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
.+|+|+++|+||||.|..+. ..++++++++|+.++++.+. .++++|+||||||.+++.+|..+|+ |+++|
T Consensus 66 ~G~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v 137 (270)
T 3rm3_A 66 AGYTVCLPRLKGHGTHYEDM-------ERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIV 137 (270)
T ss_dssp TTCEEEECCCTTCSSCHHHH-------HTCCHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEE
T ss_pred CCCEEEEeCCCCCCCCcccc-------ccCCHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEE
Confidence 47999999999999997432 24689999999999999998 8899999999999999999999999 99999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
+++++........ ..........++...... ... ...............+..+
T Consensus 138 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~---------- 190 (270)
T 3rm3_A 138 PINAAVDIPAIAA--------------GMTGGGELPRYLDSIGSD--LKN-PDVKELAYEKTPTASLLQL---------- 190 (270)
T ss_dssp EESCCSCCHHHHH--------------HSCC---CCSEEECCCCC--CSC-TTCCCCCCSEEEHHHHHHH----------
T ss_pred EEcceeccccccc--------------chhcchhHHHHHHHhCcc--ccc-cchHhhcccccChhHHHHH----------
Confidence 9997543211000 000000000000000000 000 0000000000011111110
Q ss_pred HHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCc--cEEEcCCCCCCCCCCCh-hhHHHHHH
Q 024900 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE--DFIVLPNVGHCPQDEAP-HLVNPLVE 239 (261)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~i~~~gH~~~~e~p-~~~~~~l~ 239 (261)
..... .....+.++++|+|+|+|++|.++|.+..+.+.+..++. ++++++++||.++.++| +++.+.+.
T Consensus 191 ---~~~~~-----~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 262 (270)
T 3rm3_A 191 ---ARLMA-----QTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSL 262 (270)
T ss_dssp ---HHHHH-----HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred ---HHHHH-----HHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHH
Confidence 00000 012346678999999999999999988776665544444 89999999999999987 89999999
Q ss_pred HHHHhc
Q 024900 240 SFVTRH 245 (261)
Q Consensus 240 ~fl~~~ 245 (261)
+|++++
T Consensus 263 ~fl~~~ 268 (270)
T 3rm3_A 263 EFFAKH 268 (270)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999875
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=178.85 Aligned_cols=232 Identities=12% Similarity=0.122 Sum_probs=127.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hcCCCeEEEEcChhHHHHHHHHhhC-ccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VVKDQAFFICNSIGGLVGLQAAVME-PEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~----l~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~ 79 (261)
.+|+|+++|+||||.|..+..........+++.++++|+.++++. ++.++++++||||||.+++.+|..+ |++|+
T Consensus 92 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~ 171 (354)
T 2rau_A 92 NGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIK 171 (354)
T ss_dssp TTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEE
T ss_pred CCCEEEEecCCCCCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccc
Confidence 469999999999999985431100000157899999999999887 4778999999999999999999999 99999
Q ss_pred ceEEeecchhhhhhccCCC-CCchhhHHHHHHh-hhhhhhHHHHHhhcChHHHHHHHHhhcCCCC---CCcHHHHHH-Hh
Q 024900 80 GMILLNISLRMLHIKKQPW-YGRPLIRSFQNLL-RNTAAGKLFYKMVATSESVRNILCQCYNDTS---QVTEELVEK-IL 153 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~ 153 (261)
++|++++.+.......... ........+.... ........+.. ................ ....+++.. ..
T Consensus 172 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (354)
T 2rau_A 172 GLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNN----PIWSYALANPDMPSPDPKYKSISDFLMDSLY 247 (354)
T ss_dssp EEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCEEECSSSTTC----THHHHHHHSTTSCCSSTTSSSHHHHHHHHHH
T ss_pred eEEEecccccccCcccchhhhhhhhHHHhhhhcccccCCCchhhh----HHHHHhccccccCccccchhhHHHHHHHhhh
Confidence 9999976543211100000 0000011111100 00000000000 0000000000000000 000011100 00
Q ss_pred -----ccC-CCCchHHHHHHHHh----------hcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEE
Q 024900 154 -----QPG-LETGAADVFLEFIC----------YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFI 217 (261)
Q Consensus 154 -----~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~ 217 (261)
.+. ........+..... ... ......+++|++|||+|+|++|.++|.. .+ .+.++++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~Lii~G~~D~~~p~~-~~---~l~~~~~~~ 322 (354)
T 2rau_A 248 VTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLE-RDLKFDYEGILVPTIAFVSERFGIQIFD-SK---ILPSNSEII 322 (354)
T ss_dssp HTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHT-TTCCCCCTTCCCCEEEEEETTTHHHHBC-GG---GSCTTCEEE
T ss_pred ccccCCcccCCCccHHHHHHHHhhhccccccccccC-cccccccccCCCCEEEEecCCCCCCccc-hh---hhccCceEE
Confidence 000 00000011111110 001 1123568899999999999999876533 22 334678999
Q ss_pred EcCCCCCCCCCCCh---hhHHHHHHHHHHhc
Q 024900 218 VLPNVGHCPQDEAP---HLVNPLVESFVTRH 245 (261)
Q Consensus 218 ~i~~~gH~~~~e~p---~~~~~~l~~fl~~~ 245 (261)
+++++||++++++| +++++.|.+||++.
T Consensus 323 ~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 323 LLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp EETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred EcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 99999999988765 99999999999763
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-23 Score=166.90 Aligned_cols=195 Identities=12% Similarity=0.140 Sum_probs=109.2
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhh-----
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVM----- 73 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~----- 73 (261)
.|+++|+|+++|+||||.|+.+. .+++.+.+..+++.++. ++++|+||||||.||+++|.+
T Consensus 35 ~L~~~~~vi~~Dl~GhG~S~~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~ 103 (242)
T 2k2q_B 35 FLQGECEMLAAEPPGHGTNQTSA-----------IEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREG 103 (242)
T ss_dssp HHCCSCCCEEEECCSSCCSCCCT-----------TTHHHHHHHHTTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHH
T ss_pred hCCCCeEEEEEeCCCCCCCCCCC-----------cCCHHHHHHHHHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcC
Confidence 36788999999999999997531 22334444444455655 689999999999999999987
Q ss_pred -CcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHH
Q 024900 74 -EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (261)
Q Consensus 74 -~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (261)
+|++ +++.+...... .... ........+ ...+.. ........... ...
T Consensus 104 ~~p~~---v~l~~~~~~~~--~~~~-~~~~~~~~~-------------~~~~~~----------~~~~~~~~~~~--~~~ 152 (242)
T 2k2q_B 104 IFPQA---VIISAIQPPHI--QRKK-VSHLPDDQF-------------LDHIIQ----------LGGMPAELVEN--KEV 152 (242)
T ss_dssp CSSCS---EEEEEEECSCC--CSCC-CSSCTTHHH-------------HHTTCC----------TTCCCCTTTHH--HHT
T ss_pred CCCCE---EEEECCCCCCC--Cccc-ccCCCHHHH-------------HHHHHH----------hCCCChHHhcC--HHH
Confidence 4554 44333211100 0000 000000000 000000 00000000000 000
Q ss_pred hccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChh
Q 024900 153 LQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
.. ......... +....... ...+.+|+||||+|+|++|..++.. ...+.+..++.+++++++ ||++++|+|+
T Consensus 153 ~~-~~~~~~~~~---~~~~~~~~--~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~-gH~~~~e~p~ 224 (242)
T 2k2q_B 153 MS-FFLPSFRSD---YRALEQFE--LYDLAQIQSPVHVFNGLDDKKCIRD-AEGWKKWAKDITFHQFDG-GHMFLLSQTE 224 (242)
T ss_dssp TT-TCCSCHHHH---HHHHTCCC--CSCCTTCCCSEEEEEECSSCCHHHH-HHHHHTTCCCSEEEEEEC-CCSHHHHHCH
T ss_pred HH-HHHHHHHHH---HHHHHhcc--cCCCCccCCCEEEEeeCCCCcCHHH-HHHHHHHhcCCeEEEEeC-CceeEcCCHH
Confidence 00 001111111 11111111 1226789999999999999886533 344555666677888875 9999999999
Q ss_pred hHHHHHHHHHHhcC
Q 024900 233 LVNPLVESFVTRHA 246 (261)
Q Consensus 233 ~~~~~l~~fl~~~~ 246 (261)
+|++.|.+|+++..
T Consensus 225 ~~~~~i~~fl~~~~ 238 (242)
T 2k2q_B 225 EVAERIFAILNQHP 238 (242)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhccC
Confidence 99999999998753
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-23 Score=165.53 Aligned_cols=148 Identities=19% Similarity=0.184 Sum_probs=121.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHH--HHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA--SQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a--~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
.+|+|+++|+||||.|..+. ..+++.+++ +++.++++.++.++++++|||+||.+++.+|..+|++++++|
T Consensus 60 ~G~~v~~~d~~g~g~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v 132 (210)
T 1imj_A 60 AGYRAVAIDLPGLGHSKEAA-------APAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFV 132 (210)
T ss_dssp TTCEEEEECCTTSGGGTTSC-------CSSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEE
T ss_pred CCCeEEEecCCCCCCCCCCC-------CcchhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEE
Confidence 46999999999999998653 124555555 889999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
++++.... . + .
T Consensus 133 ~~~~~~~~-----------~-----------------------------------~------~----------------- 143 (210)
T 1imj_A 133 PVAPICTD-----------K-----------------------------------I------N----------------- 143 (210)
T ss_dssp EESCSCGG-----------G-----------------------------------S------C-----------------
T ss_pred EeCCCccc-----------c-----------------------------------c------c-----------------
Confidence 98864210 0 0 0
Q ss_pred HHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHH
Q 024900 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242 (261)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 242 (261)
...+.++++|+++++|++|. ++.+..+.+ +..++.++..++++||+++.++|+++.+.+.+|+
T Consensus 144 ---------------~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl 206 (210)
T 1imj_A 144 ---------------AANYASVKTPALIVYGDQDP-MGQTSFEHL-KQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFL 206 (210)
T ss_dssp ---------------HHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTSSSEEEEEETTCCTTHHHHCHHHHHHHHHHHH
T ss_pred ---------------chhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhCCCCCEEEecCCCcchhhcCHHHHHHHHHHHH
Confidence 01123467999999999999 998887777 6667789999999999999999999999999999
Q ss_pred Hhc
Q 024900 243 TRH 245 (261)
Q Consensus 243 ~~~ 245 (261)
++.
T Consensus 207 ~~~ 209 (210)
T 1imj_A 207 QGL 209 (210)
T ss_dssp HTC
T ss_pred Hhc
Confidence 763
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.2e-22 Score=166.89 Aligned_cols=191 Identities=12% Similarity=0.133 Sum_probs=121.1
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHhcCCCeEEEEcChhHHHHHHHHhhCc---ccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLND-FCKDVVKDQAFFICNSIGGLVGLQAAVMEP---EIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~-~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p---~~v 78 (261)
|..+|+|+++|+||||.|+.+ .++++++++++.+ +++.++.++++|+||||||.|++.+|..+| ++|
T Consensus 92 l~~~~~v~~~d~~G~G~s~~~---------~~~~~~~a~~~~~~l~~~~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v 162 (300)
T 1kez_A 92 LRGIAPVRAVPQPGYEEGEPL---------PSSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPP 162 (300)
T ss_dssp TSSSCCBCCCCCTTSSTTCCB---------CSSHHHHHHHHHHHHHHHCSSCCEEEECCTHHHHHHHHHHHHTTTTTCCC
T ss_pred cCCCceEEEecCCCCCCCCCC---------CCCHHHHHHHHHHHHHHhcCCCCEEEEEECHhHHHHHHHHHHHHhcCCCc
Confidence 667899999999999998743 2689999999884 566677889999999999999999999998 589
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCC-CCCcHHHHHHHhccCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDT-SQVTEELVEKILQPGL 157 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 157 (261)
++||++++..... ......+ .. .+ ....+... ....+..+..
T Consensus 163 ~~lvl~~~~~~~~---------~~~~~~~---~~------~~-------------~~~~~~~~~~~~~~~~~~~------ 205 (300)
T 1kez_A 163 RGVVLIDVYPPGH---------QDAMNAW---LE------EL-------------TATLFDRETVRMDDTRLTA------ 205 (300)
T ss_dssp SEEECBTCCCTTT---------CHHHHHH---HH------HH-------------HGGGCCCCSSCCCHHHHHH------
T ss_pred cEEEEECCCCCcc---------hhHHHHH---HH------HH-------------HHHHHhCcCCccchHHHHH------
Confidence 9999999753210 1011111 00 00 00001100 0011111100
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC-CccEEEcCCCCCCCCC-CChhhHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGHCPQD-EAPHLVN 235 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~-e~p~~~~ 235 (261)
...+.. ... ...+..|++||++|+|++ ..+++.. ..+.+..+ ..+++++++ ||++++ |+|++++
T Consensus 206 ----~~~~~~--~~~-----~~~~~~i~~P~lii~G~d-~~~~~~~-~~~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~ 271 (300)
T 1kez_A 206 ----LGAYDR--LTG-----QWRPRETGLPTLLVSAGE-PMGPWPD-DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIA 271 (300)
T ss_dssp ----HHHHHH--HTT-----TCCCCCCSCCBEEEEESS-CSSCCCS-SCCSCCCSSCCEEEEESS-CTTTSSSSCSHHHH
T ss_pred ----HHHHHH--HHh-----cCCCCCCCCCEEEEEeCC-CCCCCcc-cchhhhcCCCCeEEEecC-CChhhccccHHHHH
Confidence 011111 111 112478999999999964 4555543 23444433 569999999 999996 9999999
Q ss_pred HHHHHHHHhcCCCCCccc
Q 024900 236 PLVESFVTRHATPPASVS 253 (261)
Q Consensus 236 ~~l~~fl~~~~~~~~~~~ 253 (261)
+.|.+||++.....+..+
T Consensus 272 ~~i~~fl~~~~~~~~~~~ 289 (300)
T 1kez_A 272 RHIDAWLGGGNSSSVDKL 289 (300)
T ss_dssp HHHHHHHTCC--------
T ss_pred HHHHHHHHhccCCCcchh
Confidence 999999987655444333
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=166.55 Aligned_cols=195 Identities=11% Similarity=0.106 Sum_probs=121.7
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHh---hCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAV---MEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~---~~p~~v 78 (261)
|+++|+|+++|+||+|.++.+ .++++++++++.++++.+. .++++|+||||||.||+++|. .+|++|
T Consensus 43 l~~~~~v~~~d~~G~~~~~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v 113 (265)
T 3ils_A 43 LKSDTAVVGLNCPYARDPENM---------NCTHGAMIESFCNEIRRRQPRGPYHLGGWSSGGAFAYVVAEALVNQGEEV 113 (265)
T ss_dssp CSSSEEEEEEECTTTTCGGGC---------CCCHHHHHHHHHHHHHHHCSSCCEEEEEETHHHHHHHHHHHHHHHTTCCE
T ss_pred cCCCCEEEEEECCCCCCCCCC---------CCCHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHhCCCCc
Confidence 678899999999999877643 3689999999999999986 468999999999999999998 678889
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|++++..... ................ .+...... ........ .+++
T Consensus 114 ~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~----~~~~~~~~---------~~~~~~~~-~~~~--------- 162 (265)
T 3ils_A 114 HSLIIIDAPIPQA--------MEQLPRAFYEHCNSIG----LFATQPGA---------SPDGSTEP-PSYL--------- 162 (265)
T ss_dssp EEEEEESCCSSCC--------CCCCCHHHHHHHHHTT----TTTTSSSS---------CSSSCSCC-CTTH---------
T ss_pred eEEEEEcCCCCCc--------ccccCHHHHHHHHHHH----HhCCCccc---------cccCCHHH-HHHH---------
Confidence 9999998753211 0000011110000000 00000000 00000000 0000
Q ss_pred CchHHHHH-HHHhhcCCCCccccCCCCCCCEE-EEecCC---CCCCC--------------chhhhhhccCC--CCccEE
Q 024900 159 TGAADVFL-EFICYSGGPLPEELLPQVKCPVL-IAWGDK---DPWEP--------------IELGRAYGNFD--SVEDFI 217 (261)
Q Consensus 159 ~~~~~~~~-~~~~~~~~~~~~~~l~~i~~Pvl-ii~G~~---D~~~~--------------~~~~~~~~~~~--~~~~~~ 217 (261)
...+. ++....... ......++||++ +|+|++ |..++ ........+.. ++.+++
T Consensus 163 ---~~~~~~~~~~~~~~~--~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 237 (265)
T 3ils_A 163 ---IPHFTAVVDVMLDYK--LAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIV 237 (265)
T ss_dssp ---HHHHHHHHHHTTTCC--CCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEE
T ss_pred ---HHHHHHHHHHHHhcC--CCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEE
Confidence 00111 111111111 123457999988 999999 98773 22222233322 367899
Q ss_pred EcCCCCCCCC--CCChhhHHHHHHHHH
Q 024900 218 VLPNVGHCPQ--DEAPHLVNPLVESFV 242 (261)
Q Consensus 218 ~i~~~gH~~~--~e~p~~~~~~l~~fl 242 (261)
.+++|||+++ .|+|++|++.|.+||
T Consensus 238 ~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 238 RADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred EcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 9999999999 999999999999997
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=159.03 Aligned_cols=151 Identities=17% Similarity=0.139 Sum_probs=117.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-----CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.+|+|+++|+||||.|..+. .++...+ +|+.++++.+.. ++++++||||||.+++.+|..+|+ ++
T Consensus 78 ~G~~v~~~d~~g~G~s~~~~--------~~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~ 147 (249)
T 2i3d_A 78 RGFTTLRFNFRSIGRSQGEF--------DHGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IE 147 (249)
T ss_dssp TTCEEEEECCTTSTTCCSCC--------CSSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EE
T ss_pred CCCEEEEECCCCCCCCCCCC--------CCccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-cc
Confidence 57999999999999997542 1345555 777777766642 379999999999999999999998 99
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|++++.... + +
T Consensus 148 ~~v~~~~~~~~-----------------------------------------------~-~------------------- 160 (249)
T 2i3d_A 148 GFMSIAPQPNT-----------------------------------------------Y-D------------------- 160 (249)
T ss_dssp EEEEESCCTTT-----------------------------------------------S-C-------------------
T ss_pred EEEEEcCchhh-----------------------------------------------h-h-------------------
Confidence 99998864210 0 0
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC-----CccEEEcCCCCCCCCCCChhhH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-----VEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
...+..+++|+++++|++|.+++.+..+.+.+..+ +.++.+++++||..+ ++++++
T Consensus 161 ------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~ 221 (249)
T 2i3d_A 161 ------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDEL 221 (249)
T ss_dssp ------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHH
T ss_pred ------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHHH
Confidence 01245678999999999999999887665544322 578999999999988 899999
Q ss_pred HHHHHHHHHhcCCCCCc
Q 024900 235 NPLVESFVTRHATPPAS 251 (261)
Q Consensus 235 ~~~l~~fl~~~~~~~~~ 251 (261)
.+.+.+|+++......+
T Consensus 222 ~~~i~~fl~~~l~~~~~ 238 (249)
T 2i3d_A 222 MGECEDYLDRRLNGELV 238 (249)
T ss_dssp HHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHhcCCCCC
Confidence 99999999987665444
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-22 Score=173.35 Aligned_cols=75 Identities=15% Similarity=0.178 Sum_probs=56.7
Q ss_pred cCCCCeEEEec----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHh--hCcc
Q 024900 3 LAKSHRVYSID----LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV--MEPE 76 (261)
Q Consensus 3 L~~~~~V~~~D----l~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~--~~p~ 76 (261)
|+.+|+|+++| +||||.|+.+. ...++.+.+..+.+.++.++++|+||||||.||+.+|. .+|+
T Consensus 64 L~~g~~Vi~~Dl~~D~~G~G~S~~~~----------~~~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~ 133 (335)
T 2q0x_A 64 LQGDWAFVQVEVPSGKIGSGPQDHAH----------DAEDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKS 133 (335)
T ss_dssp HTTTCEEEEECCGGGBTTSCSCCHHH----------HHHHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGG
T ss_pred HHCCcEEEEEeccCCCCCCCCccccC----------cHHHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchh
Confidence 56789999995 59999996321 12233222223333468899999999999999999999 5799
Q ss_pred cccceEEeecc
Q 024900 77 ICRGMILLNIS 87 (261)
Q Consensus 77 ~v~~lv~~~~~ 87 (261)
+|++||++++.
T Consensus 134 rV~~lVL~~~~ 144 (335)
T 2q0x_A 134 SITRVILHGVV 144 (335)
T ss_dssp GEEEEEEEEEC
T ss_pred ceeEEEEECCc
Confidence 99999999864
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.1e-21 Score=160.92 Aligned_cols=192 Identities=13% Similarity=0.054 Sum_probs=121.0
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhC---cccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVME---PEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~---p~~v 78 (261)
|+.+|+|+++|+||||.|+.+. .++.++++++.+.+..+. .++++|+||||||.||+.+|..+ |++|
T Consensus 106 L~~~~~v~~~d~~G~G~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v 176 (319)
T 3lcr_A 106 LDAGRRVSALVPPGFHGGQALP---------ATLTVLVRSLADVVQAEVADGEFALAGHSSGGVVAYEVARELEARGLAP 176 (319)
T ss_dssp HCTTSEEEEEECTTSSTTCCEE---------SSHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHTTCCC
T ss_pred hCCCceEEEeeCCCCCCCCCCC---------CCHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHhcCCCc
Confidence 6788999999999999886532 489999999999888874 58999999999999999999988 8889
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|++++..... .......+...+.. ..+... .. +..... .+..+..+
T Consensus 177 ~~lvl~~~~~~~~--------~~~~~~~~~~~~~~-----~~~~~~------~~-----~~~~~~-~~~~l~~~------ 225 (319)
T 3lcr_A 177 RGVVLIDSYSFDG--------DGGRPEELFRSALN-----ERFVEY------LR-----LTGGGN-LSQRITAQ------ 225 (319)
T ss_dssp SCEEEESCCCCCS--------SCCHHHHHHHHHHH-----HHHHHH------HH-----HHCCCC-HHHHHHHH------
T ss_pred cEEEEECCCCCCc--------cchhhHHHHHHHHH-----HHHhhh------hc-----ccCCCc-hhHHHHHH------
Confidence 9999999753211 00011111110000 000000 00 000000 01111111
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCCCC--ChhhHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDE--APHLVN 235 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e--~p~~~~ 235 (261)
..+..... ......|++|||+|+|++|. +++.....+.+. ....+++.+++ ||+.+++ +|++++
T Consensus 226 -------~~~~~~~~----~~~~~~i~~PvLli~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g-~H~~~~~~~~~~~va 292 (319)
T 3lcr_A 226 -------VWCLELLR----GWRPEGLTAPTLYVRPAQPL-VEQEKPEWRGDVLAAMGQVVEAPG-DHFTIIEGEHVASTA 292 (319)
T ss_dssp -------HHHHHHTT----TCCCCCCSSCEEEEEESSCS-SSCCCTHHHHHHHHTCSEEEEESS-CTTGGGSTTTHHHHH
T ss_pred -------HHHHHHHh----cCCCCCcCCCEEEEEeCCCC-CCcccchhhhhcCCCCceEEEeCC-CcHHhhCcccHHHHH
Confidence 11111110 11236799999999999854 454444444433 33467777765 8998876 999999
Q ss_pred HHHHHHHHhcCC
Q 024900 236 PLVESFVTRHAT 247 (261)
Q Consensus 236 ~~l~~fl~~~~~ 247 (261)
+.|.+||++...
T Consensus 293 ~~i~~fL~~~~~ 304 (319)
T 3lcr_A 293 HIVGDWLREAHA 304 (319)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHhccc
Confidence 999999987644
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.3e-22 Score=154.55 Aligned_cols=155 Identities=12% Similarity=0.069 Sum_probs=111.6
Q ss_pred cCC--CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAK--SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~--~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
|++ +|+|+++|+||++. ++ +++++..+++.++. ++++|+||||||.+++.+|..+| |+
T Consensus 31 l~~~~g~~vi~~d~~g~~~--------------~~---~~~~~~~~~~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p--v~ 91 (194)
T 2qs9_A 31 LEKIPGFQCLAKNMPDPIT--------------AR---ESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHR--VY 91 (194)
T ss_dssp HTTSTTCCEEECCCSSTTT--------------CC---HHHHHHHHHHTSCCCTTEEEEEETHHHHHHHHHHHHSC--CS
T ss_pred HhhccCceEEEeeCCCCCc--------------cc---HHHHHHHHHHHhCcCCCEEEEEcCcHHHHHHHHHHhCC--CC
Confidence 455 89999999999631 12 34566777888888 89999999999999999999999 99
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|++++..... ..... . ....+.. . .
T Consensus 92 ~lvl~~~~~~~~---------~~~~~-------------~--------------~~~~~~~-~-~--------------- 118 (194)
T 2qs9_A 92 AIVLVSAYTSDL---------GDENE-------------R--------------ASGYFTR-P-W--------------- 118 (194)
T ss_dssp EEEEESCCSSCT---------TCHHH-------------H--------------HTSTTSS-C-C---------------
T ss_pred EEEEEcCCcccc---------chhhh-------------H--------------HHhhhcc-c-c---------------
Confidence 999999753210 00000 0 0000000 0 0
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
.. +.+..+.+|+++|+|++|.++|.+..+.+.+.. ++++.+++++||+++.|+|+++++++
T Consensus 119 -~~----------------~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~~- 179 (194)
T 2qs9_A 119 -QW----------------EKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-ETKLHKFTDCGHFQNTEFHELITVVK- 179 (194)
T ss_dssp -CH----------------HHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-TCEEEEESSCTTSCSSCCHHHHHHHH-
T ss_pred -cH----------------HHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-CCeEEEeCCCCCccchhCHHHHHHHH-
Confidence 00 011224579999999999999998877666544 68999999999999999999999887
Q ss_pred HHHHhcCCC
Q 024900 240 SFVTRHATP 248 (261)
Q Consensus 240 ~fl~~~~~~ 248 (261)
.|+++....
T Consensus 180 ~fl~~~~~~ 188 (194)
T 2qs9_A 180 SLLKVPALE 188 (194)
T ss_dssp HHHTCCCCC
T ss_pred HHHHhhhhh
Confidence 799876543
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=149.36 Aligned_cols=141 Identities=15% Similarity=0.119 Sum_probs=113.3
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC--cccccceEEe
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME--PEICRGMILL 84 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lv~~ 84 (261)
|+|+++|+||+|.|.. ++.+++++++.++++.++.++++++||||||.+++.++..+ |++|+++|++
T Consensus 34 ~~v~~~d~~g~g~s~~-----------~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~ 102 (181)
T 1isp_A 34 DKLYAVDFWDKTGTNY-----------NNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTL 102 (181)
T ss_dssp GGEEECCCSCTTCCHH-----------HHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEE
T ss_pred ccEEEEecCCCCCchh-----------hhHHHHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEE
Confidence 4899999999999853 36789999999999999999999999999999999999998 9999999999
Q ss_pred ecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHH
Q 024900 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (261)
+++..... . .. +. +
T Consensus 103 ~~~~~~~~--------~-------------------------------------~~----------------~~-~---- 116 (181)
T 1isp_A 103 GGANRLTT--------G-------------------------------------KA----------------LP-G---- 116 (181)
T ss_dssp SCCGGGTC--------S-------------------------------------BC----------------CC-C----
T ss_pred cCcccccc--------c-------------------------------------cc----------------CC-C----
Confidence 87532100 0 00 00 0
Q ss_pred HHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 165 FLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
.. ...++|+++|+|++|.++|++.++ .+++++++++++||+.+.++| ++.+.|.+||++
T Consensus 117 -------------~~--~~~~~p~l~i~G~~D~~v~~~~~~-----~~~~~~~~~~~~gH~~~~~~~-~~~~~i~~fl~~ 175 (181)
T 1isp_A 117 -------------TD--PNQKILYTSIYSSADMIVMNYLSR-----LDGARNVQIHGVGHIGLLYSS-QVNSLIKEGLNG 175 (181)
T ss_dssp -------------SC--TTCCCEEEEEEETTCSSSCHHHHC-----CBTSEEEEESSCCTGGGGGCH-HHHHHHHHHHTT
T ss_pred -------------CC--CccCCcEEEEecCCCccccccccc-----CCCCcceeeccCchHhhccCH-HHHHHHHHHHhc
Confidence 00 113579999999999999987432 466899999999999999997 699999999976
Q ss_pred c
Q 024900 245 H 245 (261)
Q Consensus 245 ~ 245 (261)
.
T Consensus 176 ~ 176 (181)
T 1isp_A 176 G 176 (181)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=166.18 Aligned_cols=123 Identities=20% Similarity=0.349 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhH
Q 024900 39 WASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK 118 (261)
Q Consensus 39 ~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (261)
+++++..+++.++ +++++||||||.+++.+|..+|++|+++|++++..
T Consensus 186 ~~~~l~~l~~~~~--~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~------------------------------ 233 (328)
T 1qlw_A 186 TVANLSKLAIKLD--GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGE------------------------------ 233 (328)
T ss_dssp HHHHHHHHHHHHT--SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSC------------------------------
T ss_pred HHHHHHHHHHHhC--CceEEEECcccHHHHHHHHhChhheeEEEEeCCCC------------------------------
Confidence 7788888888774 99999999999999999999999999999988531
Q ss_pred HHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCC
Q 024900 119 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPW 198 (261)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~ 198 (261)
+ .. .....+.+++|+|+++|++|..
T Consensus 234 ----------------~--------~~-------------------------------~~~~~~~~~~PvLii~G~~D~~ 258 (328)
T 1qlw_A 234 ----------------C--------PK-------------------------------PEDVKPLTSIPVLVVFGDHIEE 258 (328)
T ss_dssp ----------------C--------CC-------------------------------GGGCGGGTTSCEEEEECSSCTT
T ss_pred ----------------C--------CC-------------------------------HHHHhhccCCCEEEEeccCCcc
Confidence 0 00 0011122568999999999999
Q ss_pred CCc-----hhhhhhccCC----CCccEEEcCCCC-----CCCCCCC-hhhHHHHHHHHHHhcCCC
Q 024900 199 EPI-----ELGRAYGNFD----SVEDFIVLPNVG-----HCPQDEA-PHLVNPLVESFVTRHATP 248 (261)
Q Consensus 199 ~~~-----~~~~~~~~~~----~~~~~~~i~~~g-----H~~~~e~-p~~~~~~l~~fl~~~~~~ 248 (261)
+|. +.++.+.+.. .+.+++.++++| |+++.|. |+++++.|.+||+++...
T Consensus 259 ~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~~ 323 (328)
T 1qlw_A 259 FPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTAK 323 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC-
T ss_pred ccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcccC
Confidence 985 5554443322 368999999766 9999988 999999999999887543
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-21 Score=147.42 Aligned_cols=143 Identities=13% Similarity=0.163 Sum_probs=114.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
.+|+|+++|+||+|.|.... ...++.+.++++.+.++.+. .++++++||||||.+++.+|..+| ++++|+
T Consensus 32 ~g~~v~~~d~~g~g~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~ 102 (176)
T 2qjw_A 32 LGWTHERPDFTDLDARRDLG-------QLGDVRGRLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVP--TRALFL 102 (176)
T ss_dssp TTCEEECCCCHHHHTCGGGC-------TTCCHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHTTSC--CSEEEE
T ss_pred CCCEEEEeCCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCCCCEEEEEECHHHHHHHHHHHhcC--hhheEE
Confidence 47999999999999997432 23578888888888888776 579999999999999999999998 999999
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (261)
+++..... . +.
T Consensus 103 ~~~~~~~~----------~-----------------------------------~~------------------------ 113 (176)
T 2qjw_A 103 MVPPTKMG----------P-----------------------------------LP------------------------ 113 (176)
T ss_dssp ESCCSCBT----------T-----------------------------------BC------------------------
T ss_pred ECCcCCcc----------c-----------------------------------cC------------------------
Confidence 88642110 0 00
Q ss_pred HHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHH
Q 024900 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVT 243 (261)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~ 243 (261)
.+..+++|+++|+|++|.++|.+..+.+.+.. +.++.++ ++||..+ ++++++.+.+.+|++
T Consensus 114 ----------------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~-~~~H~~~-~~~~~~~~~i~~fl~ 174 (176)
T 2qjw_A 114 ----------------ALDAAAVPISIVHAWHDELIPAADVIAWAQAR-SARLLLV-DDGHRLG-AHVQAASRAFAELLQ 174 (176)
T ss_dssp ----------------CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-TCEEEEE-SSCTTCT-TCHHHHHHHHHHHHH
T ss_pred ----------------cccccCCCEEEEEcCCCCccCHHHHHHHHHhC-CceEEEe-CCCcccc-ccHHHHHHHHHHHHH
Confidence 03457899999999999999988766654433 4788899 8999985 899999999999997
Q ss_pred h
Q 024900 244 R 244 (261)
Q Consensus 244 ~ 244 (261)
+
T Consensus 175 ~ 175 (176)
T 2qjw_A 175 S 175 (176)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-21 Score=169.81 Aligned_cols=210 Identities=11% Similarity=0.030 Sum_probs=122.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
++.+|+|+++|+||||.|..+.. .+.. ++.+|+.++++.+.. ++++|+||||||.+++.+|..+| +|++
T Consensus 184 ~~~g~~vi~~D~~G~G~s~~~~~-------~~~~-~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~ 254 (405)
T 3fnb_A 184 WEHDYNVLMVDLPGQGKNPNQGL-------HFEV-DARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKA 254 (405)
T ss_dssp HHTTCEEEEECCTTSTTGGGGTC-------CCCS-CTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCE
T ss_pred HhCCcEEEEEcCCCCcCCCCCCC-------CCCc-cHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEE
Confidence 46899999999999999964321 1222 446677777877776 79999999999999999999999 8999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++....... ....+.... ..+......+..............+...........
T Consensus 255 ~v~~~p~~~~~~~-------------~~~~~~~~~---------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (405)
T 3fnb_A 255 WIASTPIYDVAEV-------------FRISFSTAL---------KAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVD 312 (405)
T ss_dssp EEEESCCSCHHHH-------------HHHHCC---------------------------CCCHHHHHHHHHHHHHHTSSS
T ss_pred EEEecCcCCHHHH-------------HHHhhhhhh---------hCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCC
Confidence 9988875432110 000000000 000000000000000000000000001000000011
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC----CCCccEEEc---CCCCCCCCCCChhh
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVL---PNVGHCPQDEAPHL 233 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~----~~~~~~~~i---~~~gH~~~~e~p~~ 233 (261)
....+..+..... ...+.+|+||||+|+|++|.++|++.++.+.+. .+..+++++ +++||+++.++|++
T Consensus 313 ~~~~~~~~~~~~~----~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~ 388 (405)
T 3fnb_A 313 FITSVNEVLEQAQ----IVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRL 388 (405)
T ss_dssp HHHHHHHHHHHCC----CCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHH
T ss_pred HHHHHHHHHHhhc----ccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHH
Confidence 1111112222211 122678999999999999998887766554432 234578899 77778888999999
Q ss_pred HHHHHHHHHHhcCC
Q 024900 234 VNPLVESFVTRHAT 247 (261)
Q Consensus 234 ~~~~l~~fl~~~~~ 247 (261)
+++.|.+||+++..
T Consensus 389 ~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 389 MHYQVFEWLNHIFK 402 (405)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999987653
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-21 Score=157.87 Aligned_cols=207 Identities=14% Similarity=0.055 Sum_probs=122.2
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||+|.+..+ ...+++.+.+..+.+.++.++++|+||||||.+++.+|.. ++|+++|
T Consensus 56 l~~~~~v~~~d~~~~~~~~~~----------~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v 123 (275)
T 3h04_A 56 LTEHYDLIQLSYRLLPEVSLD----------CIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVI 123 (275)
T ss_dssp HTTTEEEEEECCCCTTTSCHH----------HHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEE
T ss_pred HHhCceEEeeccccCCccccc----------hhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEE
Confidence 556699999999999987431 2455666556666666667899999999999999999998 8899999
Q ss_pred Eeecchhhhh-hccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhh--cCCCCCCcHHHHHHHhccCCCC
Q 024900 83 LLNISLRMLH-IKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQC--YNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 83 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++++...... .... ...+.. .... ......... +... .................. ..
T Consensus 124 ~~~~~~~~~~~~~~~---~~~~~~---~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~ 183 (275)
T 3h04_A 124 DFYGYSRINTEPFKT---TNSYYA---KIAQ-----------SINETMIAQ-LTSPTPVVQDQIAQRFLIYVYARG--TG 183 (275)
T ss_dssp EESCCSCSCSHHHHS---CCHHHH---HHHT-----------TSCHHHHHT-TSCSSCCSSCSSGGGHHHHHHHHH--HT
T ss_pred ecccccccccccccc---ccchhh---cccc-----------cchHHHHhc-ccCCCCcCCCccccchhhhhhhhh--cC
Confidence 9987543210 0000 000000 0000 000000000 0000 000000000000000000 00
Q ss_pred chHHHHHHHHhh-----cCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCCh---
Q 024900 160 GAADVFLEFICY-----SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAP--- 231 (261)
Q Consensus 160 ~~~~~~~~~~~~-----~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p--- 231 (261)
. +...... .........+.+++ |||+|+|++|.++|.+.++.+.+..++.++.+++++||.++.+.|
T Consensus 184 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~ 258 (275)
T 3h04_A 184 K----WINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEA 258 (275)
T ss_dssp C----HHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCTHHHHHHHTTCSSEEEEEECSSCSCTTSSCCHHH
T ss_pred c----hHHhhccccccccccccccchhccCC-CEEEEecCCCCCCChHHHHHHHHhcCCceEEEeCCCCCCcccCCchhH
Confidence 0 0000000 00001112346777 999999999999999888888777777899999999999999999
Q ss_pred hhHHHHHHHHHHhcC
Q 024900 232 HLVNPLVESFVTRHA 246 (261)
Q Consensus 232 ~~~~~~l~~fl~~~~ 246 (261)
+++.+.+.+|++++.
T Consensus 259 ~~~~~~i~~fl~~~l 273 (275)
T 3h04_A 259 ITIYRKVVDFLNAIT 273 (275)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 689999999998753
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=146.87 Aligned_cols=140 Identities=13% Similarity=0.116 Sum_probs=112.1
Q ss_pred eEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 8 ~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
.++.+|+||++. ++++++++|+.++++.++ ++++++||||||.+++.+|..+|++|+++|++++.
T Consensus 44 ~~~~v~~~~~~~--------------~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 108 (191)
T 3bdv_A 44 HWQRIRQREWYQ--------------ADLDRWVLAIRRELSVCT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPA 108 (191)
T ss_dssp TSEECCCSCCSS--------------CCHHHHHHHHHHHHHTCS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCC
T ss_pred CeEEEeccCCCC--------------cCHHHHHHHHHHHHHhcC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCC
Confidence 457788888741 478999999999999886 89999999999999999999999999999999874
Q ss_pred hhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHH
Q 024900 88 LRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLE 167 (261)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (261)
.... . .+...
T Consensus 109 ~~~~----------~----------------------------------~~~~~-------------------------- 118 (191)
T 3bdv_A 109 EPMR----------F----------------------------------EIDDR-------------------------- 118 (191)
T ss_dssp CGGG----------G----------------------------------TCTTT--------------------------
T ss_pred cccc----------c----------------------------------cCccc--------------------------
Confidence 2210 0 00000
Q ss_pred HHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC----CChhhHHHHHHHHHH
Q 024900 168 FICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD----EAPHLVNPLVESFVT 243 (261)
Q Consensus 168 ~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~----e~p~~~~~~l~~fl~ 243 (261)
..+.++++|+++|+|++|.++|++..+.+.+.. ++++++++++||+++. +.|+.+ +.+.+|++
T Consensus 119 -----------~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~fl~ 185 (191)
T 3bdv_A 119 -----------IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-DSELVDVGEAGHINAEAGFGPWEYGL-KRLAEFSE 185 (191)
T ss_dssp -----------SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-TCEEEECCSCTTSSGGGTCSSCHHHH-HHHHHHHH
T ss_pred -----------cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCcccccccchhHHHHH-HHHHHHHH
Confidence 125678899999999999999988776665544 5899999999999998 667776 89999998
Q ss_pred hc
Q 024900 244 RH 245 (261)
Q Consensus 244 ~~ 245 (261)
+.
T Consensus 186 ~~ 187 (191)
T 3bdv_A 186 IL 187 (191)
T ss_dssp TT
T ss_pred Hh
Confidence 75
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.85 E-value=8.7e-21 Score=151.77 Aligned_cols=172 Identities=12% Similarity=0.082 Sum_probs=118.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCC------CCHHHHHHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPF------YTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~------~~~~~~a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
.+|+|+++|+||||.|..+..... ... .+++.+++|+.++++.+ +.++++++|||+||.+++.+|..+|
T Consensus 50 ~G~~v~~~d~~g~g~s~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 127 (238)
T 1ufo_A 50 RGFLLLAFDAPRHGEREGPPPSSK--SPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGF 127 (238)
T ss_dssp GTEEEEECCCTTSTTSSCCCCCTT--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCCccCCCCCCccc--ccchhhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhcc
Confidence 469999999999999976432100 000 13667788887777665 4589999999999999999999999
Q ss_pred ccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhcc
Q 024900 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (261)
Q Consensus 76 ~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (261)
+.+++++++++..... ...... .. +++ ..
T Consensus 128 ~~~~~~~~~~~~~~~~-------~~~~~~--------------------~~------------------~~~-~~----- 156 (238)
T 1ufo_A 128 RPRGVLAFIGSGFPMK-------LPQGQV--------------------VE------------------DPG-VL----- 156 (238)
T ss_dssp CCSCEEEESCCSSCCC-------CCTTCC--------------------CC------------------CHH-HH-----
T ss_pred CcceEEEEecCCccch-------hhhhhc--------------------cC------------------Ccc-cc-----
Confidence 9999998877642110 000000 00 000 00
Q ss_pred CCCCchHHHHHHHHhhcCCCCccccCCCC-CCCEEEEecCCCCCCCchhhhhhccCCC------CccEEEcCCCCCCCCC
Q 024900 156 GLETGAADVFLEFICYSGGPLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDS------VEDFIVLPNVGHCPQD 228 (261)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~ 228 (261)
.+ ... .....+..+ ++|+++++|++|.++|.+..+.+.+..+ +.++++++++||..+.
T Consensus 157 --------~~---~~~----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 221 (238)
T 1ufo_A 157 --------AL---YQA----PPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTP 221 (238)
T ss_dssp --------HH---HHS----CGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCH
T ss_pred --------hh---hcC----ChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHH
Confidence 00 000 011234556 8999999999999999887666554433 6799999999999999
Q ss_pred CChhhHHHHHHHHHHh
Q 024900 229 EAPHLVNPLVESFVTR 244 (261)
Q Consensus 229 e~p~~~~~~l~~fl~~ 244 (261)
+.++++.+.|.+|++.
T Consensus 222 ~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 222 LMARVGLAFLEHWLEA 237 (238)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999888888864
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-21 Score=155.97 Aligned_cols=153 Identities=18% Similarity=0.191 Sum_probs=122.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC------CeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD------QAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|.|+++|+||+|.|..+... ....++++++++|+.++++.+..+ +++++|||+||.+++.+|..+|+++
T Consensus 63 ~G~~v~~~d~~g~g~s~~~~~~---~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v 139 (223)
T 2o2g_A 63 AGLATLLIDLLTQEEEEIDLRT---RHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETV 139 (223)
T ss_dssp HTCEEEEECSSCHHHHHHHHHH---CSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred CCCEEEEEcCCCcCCCCccchh---hcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCce
Confidence 4699999999999998643100 012368999999999999888655 8999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|++++....
T Consensus 140 ~~~v~~~~~~~~-------------------------------------------------------------------- 151 (223)
T 2o2g_A 140 QAVVSRGGRPDL-------------------------------------------------------------------- 151 (223)
T ss_dssp EEEEEESCCGGG--------------------------------------------------------------------
T ss_pred EEEEEeCCCCCc--------------------------------------------------------------------
Confidence 999998853100
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC-CChhhHHHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD-EAPHLVNPL 237 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~ 237 (261)
....+.++++|+++++|++|.++|.+..+.+.+..++.++++++++||.... +.++++.+.
T Consensus 152 ------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 213 (223)
T 2o2g_A 152 ------------------APSALPHVKAPTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQL 213 (223)
T ss_dssp ------------------CTTTGGGCCSCEEEEEETTCHHHHHHHHHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHH
T ss_pred ------------------CHHHHhcCCCCEEEEEccccCCCCHHHHHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHH
Confidence 0011345679999999999999887666667766677899999999999766 567999999
Q ss_pred HHHHHHhcC
Q 024900 238 VESFVTRHA 246 (261)
Q Consensus 238 l~~fl~~~~ 246 (261)
+.+|++++.
T Consensus 214 i~~fl~~~l 222 (223)
T 2o2g_A 214 ASEWFMHYL 222 (223)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999998754
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.5e-20 Score=146.26 Aligned_cols=142 Identities=19% Similarity=0.203 Sum_probs=105.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.+|+|+++|+||+|.|..+.. .....++|+.++++.+ +.++++++||||||.+++.++ .+| ++++
T Consensus 62 ~g~~v~~~d~~g~g~s~~~~~---------~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~ 130 (208)
T 3trd_A 62 LGLKTVRFNFRGVGKSQGRYD---------NGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQ 130 (208)
T ss_dssp TTCEEEEECCTTSTTCCSCCC---------TTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSE
T ss_pred CCCEEEEEecCCCCCCCCCcc---------chHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccE
Confidence 479999999999999976421 1122344444444333 457899999999999999999 777 8999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++... .+
T Consensus 131 ~v~~~~~~~-----------------------------------------------~~---------------------- 141 (208)
T 3trd_A 131 LISVAPPVF-----------------------------------------------YE---------------------- 141 (208)
T ss_dssp EEEESCCTT-----------------------------------------------SG----------------------
T ss_pred EEEeccccc-----------------------------------------------cC----------------------
Confidence 999886420 00
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
....+..+++|+++++|++|.++|.+..+.+.+ ...+.++.+++++||..+.+. +++.+.+.
T Consensus 142 ----------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~ 204 (208)
T 3trd_A 142 ----------------GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGRL-IELRELLV 204 (208)
T ss_dssp ----------------GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTCH-HHHHHHHH
T ss_pred ----------------CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccccH-HHHHHHHH
Confidence 001134458999999999999999987766554 333489999999999998765 88999999
Q ss_pred HHHH
Q 024900 240 SFVT 243 (261)
Q Consensus 240 ~fl~ 243 (261)
+||.
T Consensus 205 ~fl~ 208 (208)
T 3trd_A 205 RNLA 208 (208)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9973
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-21 Score=161.33 Aligned_cols=178 Identities=15% Similarity=0.079 Sum_probs=120.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC------CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|+|+++|+||||.|..+. ..+++..+++|+.++++.+.. ++++|+||||||.+++.+|..+| +
T Consensus 54 ~g~~v~~~d~~G~g~s~~~~-------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~ 124 (290)
T 3ksr_A 54 LGCICMTFDLRGHEGYASMR-------QSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--V 124 (290)
T ss_dssp TTCEEECCCCTTSGGGGGGT-------TTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--C
T ss_pred CCCEEEEeecCCCCCCCCCc-------ccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--C
Confidence 47999999999999997642 347899999999999998843 47999999999999999999998 8
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
++++++++..... ..|..... .+ .. .. .+..+......
T Consensus 125 ~~~~l~~p~~~~~----~~~~~~~~--~~--------------~~--~~--------------------~~~~~~~~~~~ 162 (290)
T 3ksr_A 125 EWLALRSPALYKD----AHWDQPKV--SL--------------NA--DP--------------------DLMDYRRRALA 162 (290)
T ss_dssp SEEEEESCCCCCS----SCTTSBHH--HH--------------HH--ST--------------------THHHHTTSCCC
T ss_pred CEEEEeCcchhhh----hhhhcccc--cc--------------cC--Ch--------------------hhhhhhhhhhh
Confidence 8888887643211 01100000 00 00 00 00000000000
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC---ccEEEcCCCCCCCCC-CChhhH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV---EDFIVLPNVGHCPQD-EAPHLV 234 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~---~~~~~i~~~gH~~~~-e~p~~~ 234 (261)
...... ...+.++++|+|+|+|++|.+++.+..+.+.+..++ .++.+++++||..+. ++++++
T Consensus 163 ~~~~~~-------------~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 229 (290)
T 3ksr_A 163 PGDNLA-------------LAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEY 229 (290)
T ss_dssp GGGCHH-------------HHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHH
T ss_pred hccccH-------------HHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHH
Confidence 000000 112345789999999999999998876665544333 359999999998765 588999
Q ss_pred HHHHHHHHHhcC
Q 024900 235 NPLVESFVTRHA 246 (261)
Q Consensus 235 ~~~l~~fl~~~~ 246 (261)
.+.+.+|+++..
T Consensus 230 ~~~i~~fl~~~~ 241 (290)
T 3ksr_A 230 TRALIDWLTEMV 241 (290)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998653
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.84 E-value=9.8e-22 Score=153.37 Aligned_cols=154 Identities=13% Similarity=0.181 Sum_probs=113.7
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc--cccce
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE--ICRGM 81 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~l 81 (261)
+.+|+|+++|+| .|+. .++.++++++.++++.+ .++++++||||||.+++.+|..+|+ +|+++
T Consensus 31 ~~g~~v~~~d~~---~~~~-----------~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~ 95 (192)
T 1uxo_A 31 ADGVQADILNMP---NPLQ-----------PRLEDWLDTLSLYQHTL-HENTYLVAHSLGCPAILRFLEHLQLRAALGGI 95 (192)
T ss_dssp HTTCEEEEECCS---CTTS-----------CCHHHHHHHHHTTGGGC-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEE
T ss_pred hCCcEEEEecCC---CCCC-----------CCHHHHHHHHHHHHHhc-cCCEEEEEeCccHHHHHHHHHHhcccCCccEE
Confidence 578999999999 3332 16899999999988888 7899999999999999999999999 99999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++..... ..+ . .. ..+.... .+
T Consensus 96 v~~~~~~~~~---------~~~--------~--~~-------------------~~~~~~~-~~---------------- 120 (192)
T 1uxo_A 96 ILVSGFAKSL---------PTL--------Q--ML-------------------DEFTQGS-FD---------------- 120 (192)
T ss_dssp EEETCCSSCC---------TTC--------G--GG-------------------GGGTCSC-CC----------------
T ss_pred EEeccCCCcc---------ccc--------h--hh-------------------hhhhhcC-CC----------------
Confidence 9998743210 000 0 00 0000000 00
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhH---HHHH
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV---NPLV 238 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~---~~~l 238 (261)
.+.+.++++|+++|+|++|.++|.+..+.+.+.. ++++++++++||+++.++|+++ .+.+
T Consensus 121 ----------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l 183 (192)
T 1uxo_A 121 ----------------HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVL 183 (192)
T ss_dssp ----------------HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHH
T ss_pred ----------------HHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-CceEEEeCCCcCcccccccccHHHHHHHH
Confidence 0113345689999999999999998877766555 6899999999999999998665 5666
Q ss_pred HHHHHh
Q 024900 239 ESFVTR 244 (261)
Q Consensus 239 ~~fl~~ 244 (261)
.+|+++
T Consensus 184 ~~~l~~ 189 (192)
T 1uxo_A 184 TSYFSK 189 (192)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 666654
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.83 E-value=7e-21 Score=155.86 Aligned_cols=148 Identities=16% Similarity=0.168 Sum_probs=109.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---HHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLND---FCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~---~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
+.+|+|+++|+||+|.|.... ..++...++.+.+ ++..++.++++|+||||||.+++.+|..+|+ |++
T Consensus 79 ~~G~~v~~~d~~g~g~~~~~~--------~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~ 149 (262)
T 1jfr_A 79 SQGFVVFTIDTNTTLDQPDSR--------GRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKA 149 (262)
T ss_dssp TTTCEEEEECCSSTTCCHHHH--------HHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSE
T ss_pred hCCCEEEEeCCCCCCCCCchh--------HHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceE
Confidence 457999999999999874210 0122222222222 1223456789999999999999999999998 999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++...
T Consensus 150 ~v~~~p~~~----------------------------------------------------------------------- 158 (262)
T 1jfr_A 150 AIPLTGWNT----------------------------------------------------------------------- 158 (262)
T ss_dssp EEEESCCCS-----------------------------------------------------------------------
T ss_pred EEeecccCc-----------------------------------------------------------------------
Confidence 998774200
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchh-hhhhccCCC---CccEEEcCCCCCCCCCCChhhHHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDS---VEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
...+.++++|+|+|+|++|.+++.+. .+.+.+..+ ..++++++++||..+.++|+++.+
T Consensus 159 -----------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 221 (262)
T 1jfr_A 159 -----------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAK 221 (262)
T ss_dssp -----------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHH
T ss_pred -----------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHH
Confidence 01245678999999999999999886 665544323 348899999999999999999999
Q ss_pred HHHHHHHhcCCC
Q 024900 237 LVESFVTRHATP 248 (261)
Q Consensus 237 ~l~~fl~~~~~~ 248 (261)
.+.+||+++...
T Consensus 222 ~i~~fl~~~l~~ 233 (262)
T 1jfr_A 222 YSISWLKRFIDS 233 (262)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHhcC
Confidence 999999876543
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-19 Score=141.17 Aligned_cols=146 Identities=14% Similarity=0.057 Sum_probs=111.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
..+|+|+++|+||+|.|..+.. .....++|+.++++.+. .++++++||||||.+++.++..+ +|+
T Consensus 67 ~~g~~v~~~d~~g~g~s~~~~~---------~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~ 135 (220)
T 2fuk_A 67 ELGITVVRFNFRSVGTSAGSFD---------HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQ 135 (220)
T ss_dssp TTTCEEEEECCTTSTTCCSCCC---------TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCS
T ss_pred HCCCeEEEEecCCCCCCCCCcc---------cCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--ccc
Confidence 3579999999999999975421 12445666666665554 35899999999999999999988 899
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|++++..... . +
T Consensus 136 ~~v~~~~~~~~~----------~-----------------------------------~--------------------- 149 (220)
T 2fuk_A 136 VLISIAPPAGRW----------D-----------------------------------F--------------------- 149 (220)
T ss_dssp EEEEESCCBTTB----------C-----------------------------------C---------------------
T ss_pred EEEEecccccch----------h-----------------------------------h---------------------
Confidence 999988642110 0 0
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC-CCccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-SVEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
+.+. ..+|+++++|++|.++|.+..+.+.+.. ++.++++++++||..+. +++++.+.+
T Consensus 150 -------------------~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~i 208 (220)
T 2fuk_A 150 -------------------SDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHR-KLIDLRGAL 208 (220)
T ss_dssp -------------------TTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTT-CHHHHHHHH
T ss_pred -------------------hhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCceehh-hHHHHHHHH
Confidence 0011 1579999999999999988776665543 77899999999999888 588999999
Q ss_pred HHHHHhcCC
Q 024900 239 ESFVTRHAT 247 (261)
Q Consensus 239 ~~fl~~~~~ 247 (261)
.+|+++...
T Consensus 209 ~~~l~~~l~ 217 (220)
T 2fuk_A 209 QHGVRRWLP 217 (220)
T ss_dssp HHHHGGGCS
T ss_pred HHHHHHHhh
Confidence 999987654
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=155.75 Aligned_cols=186 Identities=16% Similarity=0.136 Sum_probs=124.7
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~---l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
++.+|.|+++|+||+|.|.... ...+++.+++.++.+++.+ ++.+++.|+|||+||.+++.+|.. |++++
T Consensus 176 ~~~G~~v~~~d~rG~G~s~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~ 248 (386)
T 2jbw_A 176 LDRGMATATFDGPGQGEMFEYK------RIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLA 248 (386)
T ss_dssp HHTTCEEEEECCTTSGGGTTTC------CSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCC
T ss_pred HhCCCEEEEECCCCCCCCCCCC------CCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-Cccee
Confidence 3578999999999999993221 1346888888999998888 566799999999999999999998 89999
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|++ +...... ....+... ........++. ....+...
T Consensus 249 a~v~~-~~~~~~~------~~~~~~~~-----------------------~~~~~~~~~g~--~~~~~~~~--------- 287 (386)
T 2jbw_A 249 ACISW-GGFSDLD------YWDLETPL-----------------------TKESWKYVSKV--DTLEEARL--------- 287 (386)
T ss_dssp EEEEE-SCCSCST------TGGGSCHH-----------------------HHHHHHHHTTC--SSHHHHHH---------
T ss_pred EEEEe-ccCChHH------HHHhccHH-----------------------HHHHHHHHhCC--CCHHHHHH---------
Confidence 99999 6432110 00000000 00000001111 00011110
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC-C-CccEEEcCCCCCCCCCCChhhHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-S-VEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~-~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
..+..+. . ...+.++++|+|+|+|++|. ++++.++.+.+.. + +.++.+++++||.. .++++++.+.
T Consensus 288 ------~~~~~~~---~-~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~ 355 (386)
T 2jbw_A 288 ------HVHAALE---T-RDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLE 355 (386)
T ss_dssp ------HHHHHTC---C-TTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHH
T ss_pred ------HHHHhCC---h-hhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHH
Confidence 0011111 1 23467789999999999999 8888776655433 4 68999999999965 6789999999
Q ss_pred HHHHHHhcCCC
Q 024900 238 VESFVTRHATP 248 (261)
Q Consensus 238 l~~fl~~~~~~ 248 (261)
+.+||+++...
T Consensus 356 i~~fl~~~l~~ 366 (386)
T 2jbw_A 356 MADWLYDVLVA 366 (386)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHhcCC
Confidence 99999887554
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-19 Score=150.14 Aligned_cols=194 Identities=22% Similarity=0.196 Sum_probs=119.1
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCC-------------CCCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChh
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFF-------------DKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIG 63 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~-------------~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~G 63 (261)
++.+|.|+++|+||+|.|..+...... +...+.+....+|+...++.+ +.+++.++|||+|
T Consensus 131 ~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~G 210 (346)
T 3fcy_A 131 VAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQG 210 (346)
T ss_dssp HTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHH
T ss_pred HhCCcEEEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHH
Confidence 568999999999999998754211000 112345666677777666555 2357999999999
Q ss_pred HHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCC
Q 024900 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ 143 (261)
Q Consensus 64 g~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (261)
|.+++.+|+.+|+ |+++|++++..... ...+........ ...+...+.. +.....
T Consensus 211 G~la~~~a~~~p~-v~~~vl~~p~~~~~------------~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~ 265 (346)
T 3fcy_A 211 GGLSLACAALEPR-VRKVVSEYPFLSDY------------KRVWDLDLAKNA-----------YQEITDYFRL-FDPRHE 265 (346)
T ss_dssp HHHHHHHHHHSTT-CCEEEEESCSSCCH------------HHHHHTTCCCGG-----------GHHHHHHHHH-HCTTCT
T ss_pred HHHHHHHHHhCcc-ccEEEECCCcccCH------------HHHhhccccccc-----------hHHHHHHHHh-cCCCcc
Confidence 9999999999998 99999988642210 000000000000 0000000100 000000
Q ss_pred CcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCC
Q 024900 144 VTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNV 222 (261)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~ 222 (261)
...+....+ ... .....+.++++|+|+++|++|.++|++....+.+. ..+.++++++++
T Consensus 266 ~~~~~~~~~-----------------~~~---d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (346)
T 3fcy_A 266 RENEVFTKL-----------------GYI---DVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDY 325 (346)
T ss_dssp THHHHHHHH-----------------GGG---CHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTC
T ss_pred hHHHHHHHh-----------------Ccc---cHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCC
Confidence 001111110 000 11234567899999999999999998877665544 336799999999
Q ss_pred CCCCCCCChhhHHHHHHHHHHhc
Q 024900 223 GHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 223 gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
||..+ +++.+.+.+||++.
T Consensus 326 gH~~~----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 326 GHEPM----RGFGDLAMQFMLEL 344 (346)
T ss_dssp CSSCC----TTHHHHHHHHHHTT
T ss_pred CCcCH----HHHHHHHHHHHHHh
Confidence 99987 67888899999763
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=144.62 Aligned_cols=153 Identities=16% Similarity=0.159 Sum_probs=110.2
Q ss_pred cC-CCCeEEEe-------------------cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cC--CCeEE
Q 024900 3 LA-KSHRVYSI-------------------DLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VK--DQAFF 57 (261)
Q Consensus 3 L~-~~~~V~~~-------------------Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~--~~~~l 57 (261)
|+ .+|+|+++ |++|+ .+..+. ..++++++++++.++++.+ +. +++++
T Consensus 46 l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~l 117 (232)
T 1fj2_A 46 IRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQE-------DESGIKQAAENIKALIDQEVKNGIPSNRIIL 117 (232)
T ss_dssp TCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCB-------CHHHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred HhcCCcEEEecCCCccccccccccccccccccccC-Cccccc-------ccHHHHHHHHHHHHHHHHHhcCCCCcCCEEE
Confidence 44 48999997 66777 332221 2367899999999999887 55 78999
Q ss_pred EEcChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhh
Q 024900 58 ICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQC 137 (261)
Q Consensus 58 vGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (261)
+||||||.+++.+|..+|++++++|++++..... . .
T Consensus 118 ~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~----------~--------------------~-------------- 153 (232)
T 1fj2_A 118 GGFSQGGALSLYTALTTQQKLAGVTALSCWLPLR----------A--------------------S-------------- 153 (232)
T ss_dssp EEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTG----------G--------------------G--------------
T ss_pred EEECHHHHHHHHHHHhCCCceeEEEEeecCCCCC----------c--------------------c--------------
Confidence 9999999999999999999999999998742110 0 0
Q ss_pred cCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC----C--
Q 024900 138 YNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF----D-- 211 (261)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~----~-- 211 (261)
+.. ....+..+++|+++++|++|.+++.+..+.+.+. .
T Consensus 154 ~~~------------------------------------~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~ 197 (232)
T 1fj2_A 154 FPQ------------------------------------GPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNP 197 (232)
T ss_dssp SCS------------------------------------SCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCG
T ss_pred ccc------------------------------------cccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCC
Confidence 000 0112456789999999999999998765543322 2
Q ss_pred CCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcCC
Q 024900 212 SVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 212 ~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~~ 247 (261)
++.++++++++||..+.|. + +.+.+||+++..
T Consensus 198 ~~~~~~~~~~~~H~~~~~~---~-~~i~~~l~~~l~ 229 (232)
T 1fj2_A 198 ANVTFKTYEGMMHSSCQQE---M-MDVKQFIDKLLP 229 (232)
T ss_dssp GGEEEEEETTCCSSCCHHH---H-HHHHHHHHHHSC
T ss_pred CceEEEEeCCCCcccCHHH---H-HHHHHHHHHhcC
Confidence 4589999999999984433 3 456667766543
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-20 Score=151.23 Aligned_cols=149 Identities=18% Similarity=0.169 Sum_probs=105.5
Q ss_pred cCCCCeEEEe--cCCCCCCCCCCCCCCCCCCCCCCHHH---HHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhh
Q 024900 3 LAKSHRVYSI--DLIGYGYSDKPNPRDFFDKPFYTFET---WASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 3 L~~~~~V~~~--Dl~G~G~S~~~~~~~~~~~~~~~~~~---~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
|+++|+|+++ |++|+|.|........ ..++... .++|+.++++.+ +.+++.++||||||.+++.+|..
T Consensus 85 l~~~~~v~~~~~d~~g~g~s~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 161 (251)
T 2r8b_A 85 LLPQATILSPVGDVSEHGAARFFRRTGE---GVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIE 161 (251)
T ss_dssp HSTTSEEEEECCSEEETTEEESSCBCGG---GCBCHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHH
T ss_pred cCCCceEEEecCCcCCCCCcccccCCCC---CcCCHHHHHHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHh
Confidence 6677999999 8999998864321110 1234333 355555555554 77899999999999999999999
Q ss_pred CcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 024900 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (261)
Q Consensus 74 ~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
+|++++++|++++.... . .
T Consensus 162 ~p~~v~~~v~~~~~~~~--------~--~--------------------------------------------------- 180 (251)
T 2r8b_A 162 QPELFDAAVLMHPLIPF--------E--P--------------------------------------------------- 180 (251)
T ss_dssp STTTCSEEEEESCCCCS--------C--C---------------------------------------------------
T ss_pred CCcccCeEEEEecCCCc--------c--c---------------------------------------------------
Confidence 99999999999864210 0 0
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC--CccEE-EcCCCCCCCCCCC
Q 024900 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFI-VLPNVGHCPQDEA 230 (261)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~-~i~~~gH~~~~e~ 230 (261)
......+++|+|+++|++|.+++.+..+.+.+..+ +.++. .++++||..+.+.
T Consensus 181 ------------------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~ 236 (251)
T 2r8b_A 181 ------------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIRSGE 236 (251)
T ss_dssp ------------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCCHHH
T ss_pred ------------------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHH
Confidence 00113468999999999999999887666655433 34555 7889999998777
Q ss_pred hhhHHHHHH
Q 024900 231 PHLVNPLVE 239 (261)
Q Consensus 231 p~~~~~~l~ 239 (261)
++++.+.|.
T Consensus 237 ~~~~~~~l~ 245 (251)
T 2r8b_A 237 IDAVRGFLA 245 (251)
T ss_dssp HHHHHHHHG
T ss_pred HHHHHHHHH
Confidence 665544433
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=143.26 Aligned_cols=160 Identities=10% Similarity=-0.059 Sum_probs=106.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|++||+||||++. ++++..++..+..+++.|+||||||.+|+.+|.++|..+..++..
T Consensus 32 ~~~~v~~pdl~~~g~~~------------------~~~l~~~~~~~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~ 93 (202)
T 4fle_A 32 PHIEMQIPQLPPYPAEA------------------AEMLESIVMDKAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPA 93 (202)
T ss_dssp TTSEEECCCCCSSHHHH------------------HHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CCcEEEEeCCCCCHHHH------------------HHHHHHHHHhcCCCcEEEEEEChhhHHHHHHHHHhcccchheeec
Confidence 36999999999998652 456777788888899999999999999999999999887777654
Q ss_pred ecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHH
Q 024900 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (261)
.++..... . ..... . .. . .............
T Consensus 94 ~~~~~~~~--~--------------~~~~~--~-~~----~------------~~~~~~~~~~~~~-------------- 124 (202)
T 4fle_A 94 VRPFELLS--D--------------YLGEN--Q-NP----Y------------TGQKYVLESRHIY-------------- 124 (202)
T ss_dssp SSHHHHGG--G--------------GCEEE--E-CT----T------------TCCEEEECHHHHH--------------
T ss_pred cchHHHHH--H--------------hhhhh--c-cc----c------------ccccccchHHHHH--------------
Confidence 43211100 0 00000 0 00 0 0000000000000
Q ss_pred HHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 165 FLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
+... ......++++|||+|+|++|.++|.+.+..+ .+++++.+++|+||. ++.++++.+.|.+||+-
T Consensus 125 --~~~~------~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l---~~~~~l~i~~g~~H~--~~~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 125 --DLKA------MQIEKLESPDLLWLLQQTGDEVLDYRQAVAY---YTPCRQTVESGGNHA--FVGFDHYFSPIVTFLGL 191 (202)
T ss_dssp --HHHT------TCCSSCSCGGGEEEEEETTCSSSCHHHHHHH---TTTSEEEEESSCCTT--CTTGGGGHHHHHHHHTC
T ss_pred --HHHh------hhhhhhccCceEEEEEeCCCCCCCHHHHHHH---hhCCEEEEECCCCcC--CCCHHHHHHHHHHHHhh
Confidence 0000 1233567899999999999999999876554 356899999999996 46778888899999974
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=9.7e-19 Score=140.15 Aligned_cols=157 Identities=13% Similarity=0.059 Sum_probs=115.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCCC-CC-------CCCCCCHHHHHHHHHHHHHHhc-----CCCeEEEEcChhHHHHHHHH
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRD-FF-------DKPFYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAA 71 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~-~~-------~~~~~~~~~~a~dl~~~~~~l~-----~~~~~lvGhS~Gg~va~~~a 71 (261)
.+|.|+++|+||||.|....... .. ....++...+++|+.++++.+. .+++.++||||||.+++.+|
T Consensus 54 ~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a 133 (236)
T 1zi8_A 54 QGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVA 133 (236)
T ss_dssp TTCEEEEECGGGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHH
T ss_pred CCcEEEeccccccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHh
Confidence 48999999999999986421000 00 0012467888999999998886 46899999999999999999
Q ss_pred hhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHH
Q 024900 72 VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEK 151 (261)
Q Consensus 72 ~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (261)
..+| +++++.+.+... .
T Consensus 134 ~~~~--~~~~v~~~~~~~--------------~----------------------------------------------- 150 (236)
T 1zi8_A 134 SKGY--VDRAVGYYGVGL--------------E----------------------------------------------- 150 (236)
T ss_dssp HHTC--SSEEEEESCSSG--------------G-----------------------------------------------
T ss_pred ccCC--ccEEEEecCccc--------------c-----------------------------------------------
Confidence 9998 888876654200 0
Q ss_pred HhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC---CCccEEEcCCCCCCCCC
Q 024900 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD---SVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~ 228 (261)
. ....+.++++|+++++|++|.++|.+..+.+.+.. ++.++++++++||..+.
T Consensus 151 --~----------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 206 (236)
T 1zi8_A 151 --K----------------------QLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFAR 206 (236)
T ss_dssp --G----------------------CGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTC
T ss_pred --c----------------------chhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCccccc
Confidence 0 01124557899999999999999988765544321 46799999999998887
Q ss_pred CCh--------hhHHHHHHHHHHhcCCC
Q 024900 229 EAP--------HLVNPLVESFVTRHATP 248 (261)
Q Consensus 229 e~p--------~~~~~~l~~fl~~~~~~ 248 (261)
+.+ +++.+.+.+|++++...
T Consensus 207 ~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 207 TGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp TTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 665 46888999999887653
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=146.84 Aligned_cols=194 Identities=11% Similarity=0.115 Sum_probs=122.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCc----c
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEP----E 76 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p----~ 76 (261)
.|..+|+|+++|+||||.|...... ...++++++++++.+.++.+. .++++|+||||||.||+++|.++| +
T Consensus 113 ~L~~~~~v~~~d~~G~g~~~~~~~~----~~~~~~~~~a~~~~~~i~~~~~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~ 188 (319)
T 2hfk_A 113 SFQEERDFLAVPLPGYGTGTGTGTA----LLPADLDTALDAQARAILRAAGDAPVVLLGHAGGALLAHELAFRLERAHGA 188 (319)
T ss_dssp TTTTTCCEEEECCTTCCBC---CBC----CEESSHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSC
T ss_pred hcCCCCceEEecCCCCCCCcccccC----CCCCCHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHHhhCC
Confidence 4678899999999999998210000 023689999999999988875 678999999999999999999875 4
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
.|++||++++.+... ... +...+. .+. ...+...+ .......+..+
T Consensus 189 ~v~~lvl~d~~~~~~---------~~~---~~~~~~----------~l~-----~~~~~~~~---~~~~~~~~~~~---- 234 (319)
T 2hfk_A 189 PPAGIVLVDPYPPGH---------QEP---IEVWSR----------QLG-----EGLFAGEL---EPMSDARLLAM---- 234 (319)
T ss_dssp CCSEEEEESCCCTTS---------CHH---HHHTHH----------HHH-----HHHHHTCS---SCCCHHHHHHH----
T ss_pred CceEEEEeCCCCCCc---------hhH---HHHHHH----------Hhh-----HHHHHhhc---cccchHHHHHH----
Confidence 699999999753210 000 000000 000 00011000 00111111110
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchh-hhhhccCC-CCccEEEcCCCCCCCCC-CChhh
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFD-SVEDFIVLPNVGHCPQD-EAPHL 233 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~-~~~~~~~i~~~gH~~~~-e~p~~ 233 (261)
..+.... .. .....+++||++++| +|..++.+. ...+.+.. +..+++.++ +||+.++ ++|++
T Consensus 235 ------~~~~~~~--~~-----~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~H~~~~~e~~~~ 299 (319)
T 2hfk_A 235 ------GRYARFL--AG-----PRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVP-GDHFTMMRDHAPA 299 (319)
T ss_dssp ------HHHHHHH--HS-----CCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTHHHHTCHHH
T ss_pred ------HHHHHHH--Hh-----CCCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeC-CCcHHHHHHhHHH
Confidence 1111111 11 124678999999999 898877665 44455443 357889998 5999754 89999
Q ss_pred HHHHHHHHHHhcCCC
Q 024900 234 VNPLVESFVTRHATP 248 (261)
Q Consensus 234 ~~~~l~~fl~~~~~~ 248 (261)
+++.|.+||++....
T Consensus 300 ~~~~i~~~L~~~~~~ 314 (319)
T 2hfk_A 300 VAEAVLSWLDAIEGI 314 (319)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhcCCC
Confidence 999999999875543
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-19 Score=145.51 Aligned_cols=161 Identities=12% Similarity=0.035 Sum_probs=116.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhhC------c
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVME------P 75 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~------p 75 (261)
.+|+|+++|+||+|.. ++..+++|+.++++.+.. ++++|+||||||.+++.+|..+ |
T Consensus 92 ~G~~v~~~d~~~~~~~--------------~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~ 157 (262)
T 2pbl_A 92 KGWAVAMPSYELCPEV--------------RISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVG 157 (262)
T ss_dssp TTEEEEEECCCCTTTS--------------CHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHH
T ss_pred CCCEEEEeCCCCCCCC--------------ChHHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhcccccccccc
Confidence 5799999999998642 567888899888887765 5999999999999999999988 9
Q ss_pred ccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhcc
Q 024900 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (261)
Q Consensus 76 ~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (261)
++|+++|++++..... ... .. ++. ..+ . .+.+....
T Consensus 158 ~~v~~~vl~~~~~~~~----------~~~-------~~------~~~---------~~~----~----~~~~~~~~---- 193 (262)
T 2pbl_A 158 ARIRNVVPISPLSDLR----------PLL-------RT------SMN---------EKF----K----MDADAAIA---- 193 (262)
T ss_dssp TTEEEEEEESCCCCCG----------GGG-------GS------TTH---------HHH----C----CCHHHHHH----
T ss_pred ccceEEEEecCccCch----------HHH-------hh------hhh---------hhh----C----CCHHHHHh----
Confidence 9999999998743210 000 00 000 000 0 00111000
Q ss_pred CCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
. .....+..+++|+++++|++|..++.+.++.+.+..+ .++++++++||+.++|+|++++
T Consensus 194 ---------------~----~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~ 253 (262)
T 2pbl_A 194 ---------------E----SPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-ADHVIAFEKHHFNVIEPLADPE 253 (262)
T ss_dssp ---------------T----CGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-CEEEEETTCCTTTTTGGGGCTT
T ss_pred ---------------c----CcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-CeEEEeCCCCcchHHhhcCCCC
Confidence 0 0112356789999999999999888887776665545 8999999999999999999988
Q ss_pred HHHHHHHH
Q 024900 236 PLVESFVT 243 (261)
Q Consensus 236 ~~l~~fl~ 243 (261)
..+.+++-
T Consensus 254 ~~l~~~l~ 261 (262)
T 2pbl_A 254 SDLVAVIT 261 (262)
T ss_dssp CHHHHHHH
T ss_pred cHHHHHHh
Confidence 88887763
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-18 Score=146.60 Aligned_cols=147 Identities=13% Similarity=0.126 Sum_probs=107.1
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-----HHHHhcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLND-----FCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~-----~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
..+|.|+++|+||+|.|.... ..++...++.+.+ +...++.+++.++||||||.+++.+|..+|+ +
T Consensus 121 ~~G~~vv~~d~~g~g~s~~~~--------~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v 191 (306)
T 3vis_A 121 SHGFVVIAIDTNTTLDQPDSR--------ARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-L 191 (306)
T ss_dssp TTTEEEEEECCSSTTCCHHHH--------HHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-C
T ss_pred hCCCEEEEecCCCCCCCcchH--------HHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-e
Confidence 357999999999999985321 0112222222221 1122345689999999999999999999997 8
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|++++...
T Consensus 192 ~~~v~~~~~~~--------------------------------------------------------------------- 202 (306)
T 3vis_A 192 KAAIPLTPWHL--------------------------------------------------------------------- 202 (306)
T ss_dssp SEEEEESCCCS---------------------------------------------------------------------
T ss_pred eEEEEeccccC---------------------------------------------------------------------
Confidence 99988775210
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch-hhhhhccCCC---CccEEEcCCCCCCCCCCChhhH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDS---VEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
...+.++++|+++++|++|.++|.+ ..+.+.+..+ ..++++++++||..+.++++++
T Consensus 203 -------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~ 263 (306)
T 3vis_A 203 -------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTI 263 (306)
T ss_dssp -------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHH
T ss_pred -------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhHH
Confidence 0124567899999999999999987 3555444332 3568999999999999999999
Q ss_pred HHHHHHHHHhcCC
Q 024900 235 NPLVESFVTRHAT 247 (261)
Q Consensus 235 ~~~l~~fl~~~~~ 247 (261)
++.+.+||+++..
T Consensus 264 ~~~i~~fl~~~l~ 276 (306)
T 3vis_A 264 GMYSVAWLKRFVD 276 (306)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcc
Confidence 9999999987543
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-18 Score=146.29 Aligned_cols=197 Identities=10% Similarity=0.052 Sum_probs=123.6
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-cCCCeEEEEcChhHHHHHHHHhh---Cccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVM---EPEI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-~~~~~~lvGhS~Gg~va~~~a~~---~p~~ 77 (261)
.|+.+|+|+++|+||||.+..+ ..+++++++++.+.+..+ ..++++|+||||||.||+++|.. +|++
T Consensus 123 ~L~~~~~v~~~d~~g~~~~~~~---------~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~ 193 (329)
T 3tej_A 123 YLDPQWSIIGIQSPRPNGPMQT---------AANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRARGEQ 193 (329)
T ss_dssp TSCTTCEEEEECCCTTTSHHHH---------CSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCCCeEEEeeCCCCCCCCCC---------CCCHHHHHHHHHHHHHHhCCCCCEEEEEEccCHHHHHHHHHHHHhcCCc
Confidence 4678899999999999988642 248999999988888776 45799999999999999999999 9999
Q ss_pred ccceEEeecchhhhh-hccCCC--CCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 024900 78 CRGMILLNISLRMLH-IKKQPW--YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (261)
Q Consensus 78 v~~lv~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (261)
|.++|++++.+.... ...... ........+. . .......... ....++.+..+..
T Consensus 194 v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------~~~~~~~~~~---~~~~~~~~~~~~~ 251 (329)
T 3tej_A 194 VAFLGLLDTWPPETQNWQEKEANGLDPEVLAEIN---R----------------EREAFLAAQQ---GSTSTELFTTIEG 251 (329)
T ss_dssp EEEEEEESCCCTHHHHTC-----CCCCTHHHHHH---H----------------HHHHHHHTTC---CCSCCHHHHHHHH
T ss_pred ccEEEEeCCCCCCccccccccccccChhhHHHHH---H----------------HHHHHHHhcc---ccccHHHHHHHHH
Confidence 999999997653321 000000 0000000000 0 0000010001 1111222222111
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCCh--h
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAP--H 232 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p--~ 232 (261)
.+........ ......+++|+++++|++|...+.+.........++.+++.++ +||+.+++.| +
T Consensus 252 ---------~~~~~~~~~~----~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~~~~~~~v~-g~H~~~~~~~~~~ 317 (329)
T 3tej_A 252 ---------NYADAVRLLT----TAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQD-CAHVDIISPGTFE 317 (329)
T ss_dssp ---------HHHHHHHHHT----TCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEEEEEEEEES-SCGGGGGSTTTHH
T ss_pred ---------HHHHHHHHHh----cCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhcCCcEEEEec-CChHHhCCChHHH
Confidence 1111101110 1123578999999999999876655434444444667888997 7999998887 7
Q ss_pred hHHHHHHHHHH
Q 024900 233 LVNPLVESFVT 243 (261)
Q Consensus 233 ~~~~~l~~fl~ 243 (261)
++++.|.+||.
T Consensus 318 ~ia~~l~~~L~ 328 (329)
T 3tej_A 318 KIGPIIRATLN 328 (329)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 89999999984
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.6e-18 Score=148.65 Aligned_cols=191 Identities=13% Similarity=0.131 Sum_probs=121.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.+.+|+|+++|+||+|.|.... ...+...++.++.+++..+. .+++.++||||||.+++.+|+.+|++|+
T Consensus 218 ~~~G~~V~~~D~~G~G~s~~~~-------~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~ 290 (415)
T 3mve_A 218 AKHDIAMLTVDMPSVGYSSKYP-------LTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIK 290 (415)
T ss_dssp GGGTCEEEEECCTTSGGGTTSC-------CCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCC
T ss_pred HhCCCEEEEECCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCccee
Confidence 3678999999999999997542 12456677777777776654 4689999999999999999999999999
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|++++..... .... ...... +......+...+.... .....+..
T Consensus 291 ~~v~~~~~~~~~------------~~~~-~~~~~~------------~~~~~~~~~~~~g~~~-~~~~~~~~-------- 336 (415)
T 3mve_A 291 ACVILGAPIHDI------------FASP-QKLQQM------------PKMYLDVLASRLGKSV-VDIYSLSG-------- 336 (415)
T ss_dssp EEEEESCCCSHH------------HHCH-HHHTTS------------CHHHHHHHHHHTTCSS-BCHHHHHH--------
T ss_pred EEEEECCccccc------------cccH-HHHHHh------------HHHHHHHHHHHhCCCc-cCHHHHHH--------
Confidence 999998753210 0000 000000 0001111111111111 11111111
Q ss_pred chHHHHHHHHhhcCCCCcccc--CCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEEL--LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~--l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
.+..+.. ..... ..++++|+|+|+|++|.++|.+.++.+.+..++.+++++++.. +.+.++++.+.
T Consensus 337 -------~~~~~~~--~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~l~~i~g~~---~h~~~~~~~~~ 404 (415)
T 3mve_A 337 -------QMAAWSL--KVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKISSKT---ITQGYEQSLDL 404 (415)
T ss_dssp -------HGGGGCT--TTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHHTBTTCEEEEECCCS---HHHHHHHHHHH
T ss_pred -------HHhhcCc--ccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCceEEEecCCC---cccchHHHHHH
Confidence 0011110 00111 3688999999999999999998877777677778999999832 22477888889
Q ss_pred HHHHHHhcC
Q 024900 238 VESFVTRHA 246 (261)
Q Consensus 238 l~~fl~~~~ 246 (261)
+.+||+++.
T Consensus 405 i~~fL~~~L 413 (415)
T 3mve_A 405 AIKWLEDEL 413 (415)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998754
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-18 Score=143.03 Aligned_cols=177 Identities=11% Similarity=0.071 Sum_probs=114.5
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC---------
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME--------- 74 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~--------- 74 (261)
+.+|+|+++|+||.+.+..+ ..++++++.+..+++.++.++++|+||||||.+++.+|..+
T Consensus 75 ~~g~~vi~~d~r~~~~~~~~----------~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~ 144 (273)
T 1vkh_A 75 ESTVCQYSIEYRLSPEITNP----------RNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSE 144 (273)
T ss_dssp TCCEEEEEECCCCTTTSCTT----------HHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCH
T ss_pred cCCcEEEEeecccCCCCCCC----------cHHHHHHHHHHHHHHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccc
Confidence 67899999999998765422 35677777777778888889999999999999999999986
Q ss_pred --------cccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcH
Q 024900 75 --------PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTE 146 (261)
Q Consensus 75 --------p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (261)
|++|+++|++++...... .. ........+ ....+....
T Consensus 145 ~~~~~~~~~~~v~~~v~~~~~~~~~~--------------~~---~~~~~~~~~-------------~~~~~~~~~---- 190 (273)
T 1vkh_A 145 AQLQMLGLLQIVKRVFLLDGIYSLKE--------------LL---IEYPEYDCF-------------TRLAFPDGI---- 190 (273)
T ss_dssp HHHHHHHHHTTEEEEEEESCCCCHHH--------------HH---HHCGGGHHH-------------HHHHCTTCG----
T ss_pred cccccccCCcccceeeeecccccHHH--------------hh---hhcccHHHH-------------HHHHhcccc----
Confidence 889999999886432110 00 000000000 000010000
Q ss_pred HHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc----CCCCccEEEcCCC
Q 024900 147 ELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNV 222 (261)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~i~~~ 222 (261)
+. +....... ..+. ...+..+++|||+|+|++|.++|.+.++.+.+ ...+.++.+++++
T Consensus 191 ~~--------~~~~~~~~-~~~~--------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~ 253 (273)
T 1vkh_A 191 QM--------YEEEPSRV-MPYV--------KKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLG 253 (273)
T ss_dssp GG--------CCCCHHHH-HHHH--------HHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred cc--------hhhccccc-Chhh--------hhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 00 00000000 0000 00122367999999999999998876655433 2334789999999
Q ss_pred CCCCCCCChhhHHHHHHHHH
Q 024900 223 GHCPQDEAPHLVNPLVESFV 242 (261)
Q Consensus 223 gH~~~~e~p~~~~~~l~~fl 242 (261)
||..++++ +++.+.|.+|+
T Consensus 254 gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 254 LHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp SGGGGGGC-HHHHHHHHHTC
T ss_pred cccccccC-hHHHHHHHHHc
Confidence 99999988 88888888876
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.2e-19 Score=139.21 Aligned_cols=147 Identities=16% Similarity=0.099 Sum_probs=108.4
Q ss_pred CCCeEEEecCC-------------------CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cC--CCeEEEEc
Q 024900 5 KSHRVYSIDLI-------------------GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VK--DQAFFICN 60 (261)
Q Consensus 5 ~~~~V~~~Dl~-------------------G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~--~~~~lvGh 60 (261)
.+|+|+++|+| |+|.|... ..++++++++++..+++.+ +. ++++++||
T Consensus 42 ~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 113 (218)
T 1auo_A 42 LTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI--------SLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGF 113 (218)
T ss_dssp TTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE--------CHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred CceEEEeCCCCCccccCCCCCcccceecCcCCCccccc--------chHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEE
Confidence 68999998766 55544321 2357888899999998887 44 48999999
Q ss_pred ChhHHHHHHHHh-hCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcC
Q 024900 61 SIGGLVGLQAAV-MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN 139 (261)
Q Consensus 61 S~Gg~va~~~a~-~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (261)
|+||.+++.+|. .+|++++++|++++.... .. +.
T Consensus 114 S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~----------~~-----------------------------------~~ 148 (218)
T 1auo_A 114 SQGGAVVFHTAFINWQGPLGGVIALSTYAPT----------FG-----------------------------------DE 148 (218)
T ss_dssp THHHHHHHHHHHTTCCSCCCEEEEESCCCTT----------CC-----------------------------------TT
T ss_pred CHHHHHHHHHHHhcCCCCccEEEEECCCCCC----------ch-----------------------------------hh
Confidence 999999999999 999999999999874210 00 00
Q ss_pred CCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC----CCcc
Q 024900 140 DTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----SVED 215 (261)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~ 215 (261)
+ .. ....+++|+++++|++|.++|.+..+.+.+.. .+.+
T Consensus 149 ~--~~-----------------------------------~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~ 191 (218)
T 1auo_A 149 L--EL-----------------------------------SASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVT 191 (218)
T ss_dssp C--CC-----------------------------------CHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEE
T ss_pred h--hh-----------------------------------hhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceE
Confidence 0 00 00235789999999999999988665544322 2478
Q ss_pred EEEcCCCCCCCCCCChhhHHHHHHHHH
Q 024900 216 FIVLPNVGHCPQDEAPHLVNPLVESFV 242 (261)
Q Consensus 216 ~~~i~~~gH~~~~e~p~~~~~~l~~fl 242 (261)
+++++ +||..+.+.++++.+.|.+++
T Consensus 192 ~~~~~-~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 192 WQEYP-MGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp EEEES-CSSSCCHHHHHHHHHHHHHHH
T ss_pred EEEec-CCCccCHHHHHHHHHHHHHHh
Confidence 99999 999998888887777776665
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-17 Score=141.28 Aligned_cols=216 Identities=10% Similarity=0.087 Sum_probs=119.4
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|.|+++|+||||.|..... ...+....++|+.++++.+. .+++.++|||+||.+++.+|..+| +|
T Consensus 123 ~G~~v~~~d~~g~g~s~~~~~------~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~ 195 (367)
T 2hdw_A 123 RGFVTLAFDPSYTGESGGQPR------NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RV 195 (367)
T ss_dssp TTCEEEEECCTTSTTSCCSSS------SCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TC
T ss_pred CCCEEEEECCCCcCCCCCcCc------cccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-Cc
Confidence 579999999999999974321 12246677888877777663 457999999999999999999998 69
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcC---------C-CCCCcHHH
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN---------D-TSQVTEEL 148 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~ 148 (261)
+++|++++......... .+............+.... ...........+. . ......+.
T Consensus 196 ~~~v~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 263 (367)
T 2hdw_A 196 KAVVTSTMYDMTRVMSK-GYNDSVTLEQRTRTLEQLG-----------QQRWKDAESGTPAYQPPYNELKGGEAQFLVDY 263 (367)
T ss_dssp CEEEEESCCCHHHHHHH-TTTTCCCHHHHHHHHHHHH-----------HHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHH
T ss_pred cEEEEeccccccHHHhh-hhccccchHHHHHHHHHHH-----------HHHHHHhccCCceeecCCCccccccccccCCc
Confidence 99999985421100000 0000000000111100000 0000000000000 0 00000111
Q ss_pred HHHHhcc-CCCCc-------h-HHHHHHHHhhcCCCCccccCCCCC-CCEEEEecCCCCCCCchhhhhhc-cCCCCccEE
Q 024900 149 VEKILQP-GLETG-------A-ADVFLEFICYSGGPLPEELLPQVK-CPVLIAWGDKDPWEPIELGRAYG-NFDSVEDFI 217 (261)
Q Consensus 149 ~~~~~~~-~~~~~-------~-~~~~~~~~~~~~~~~~~~~l~~i~-~Pvlii~G~~D~~~~~~~~~~~~-~~~~~~~~~ 217 (261)
...+... +..+. . ......+ ... .....+.+++ +|||+|+|++|. +.+..+.+. +..++.+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~ 337 (367)
T 2hdw_A 264 HDYYMTPRGYHPRAVNSGNAWTMTTPLSF---MNM-PILTYIKEISPRPILLIHGERAH--SRYFSETAYAAAAEPKELL 337 (367)
T ss_dssp HHHHTSTTTCCTTCSTTTCCCBTTTHHHH---TTS-CSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHHSCSSEEEE
T ss_pred cceeecccccCcccccccchhhhhhHHHh---cCC-ChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHhCCCCeeEE
Confidence 1111100 00000 0 0000001 000 1123467788 999999999998 555555443 356678999
Q ss_pred EcCCCCCCCCCCChhh-HHHHHHHHHHhc
Q 024900 218 VLPNVGHCPQDEAPHL-VNPLVESFVTRH 245 (261)
Q Consensus 218 ~i~~~gH~~~~e~p~~-~~~~l~~fl~~~ 245 (261)
+++++||..+.++|+. +.+.+.+|++++
T Consensus 338 ~~~g~gH~~~~~~~~~~~~~~i~~fl~~~ 366 (367)
T 2hdw_A 338 IVPGASHVDLYDRLDRIPFDRIAGFFDEH 366 (367)
T ss_dssp EETTCCTTHHHHCTTTSCHHHHHHHHHHH
T ss_pred EeCCCCeeeeecCchhHHHHHHHHHHHhh
Confidence 9999999988888875 588889999864
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-18 Score=151.61 Aligned_cols=200 Identities=12% Similarity=0.043 Sum_probs=115.0
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
+.+|+|+++|+||+|.+.... ..+.++++.+.+..+.+... .+++.|+||||||.+++.+|..+|+ |+++
T Consensus 181 ~~Gy~V~a~D~rG~g~~~~~~-------~~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~ 252 (422)
T 3k2i_A 181 GHGFATLALAYYNFEDLPNNM-------DNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSAT 252 (422)
T ss_dssp TTTCEEEEEECSSSTTSCSSC-------SCEETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEE
T ss_pred hCCCEEEEEccCCCCCCCCCc-------ccCCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEE
Confidence 468999999999999886432 22456666555544443333 4789999999999999999999998 9999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++...... ..+..+.. ....... ..... .+..... ..+ ...+....
T Consensus 253 V~~~~~~~~~~---~~~~~~~~--------~~~~~~~-~~~~~------------~~~~~~~------~~~-~~~~~~~~ 301 (422)
T 3k2i_A 253 VSINGSGISGN---TAINYKHS--------SIPPLGY-DLRRI------------KVAFSGL------VDI-VDIRNALV 301 (422)
T ss_dssp EEESCCSBCCS---SCEEETTE--------EECCCCB-CGGGC------------EECTTSC------EEC-TTCBCCCT
T ss_pred EEEcCcccccC---CchhhcCC--------cCCCccc-chhhc------------ccCcchh------HHH-HHHHhhhh
Confidence 99987542110 00000000 0000000 00000 0000000 000 00000000
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh-h----hhccCC-CCccEEEcCCCCCCC---------
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-R----AYGNFD-SVEDFIVLPNVGHCP--------- 226 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-~----~~~~~~-~~~~~~~i~~~gH~~--------- 226 (261)
.. .. ......+.++++|+|+|+|++|.++|.+.. + .+.+.. ++.++++++++||..
T Consensus 302 ~~-------~~--~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~ 372 (422)
T 3k2i_A 302 GG-------YK--NPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCP 372 (422)
T ss_dssp TG-------GG--STTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTTCCCCC
T ss_pred hc-------cc--ccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCCCCcch
Confidence 00 00 001123567899999999999999987732 2 233332 337899999999997
Q ss_pred -------------------CCCChhhHHHHHHHHHHhcCCCCCc
Q 024900 227 -------------------QDEAPHLVNPLVESFVTRHATPPAS 251 (261)
Q Consensus 227 -------------------~~e~p~~~~~~l~~fl~~~~~~~~~ 251 (261)
+.+.++++.+.+.+||+++......
T Consensus 373 ~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~~~ 416 (422)
T 3k2i_A 373 ASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQK 416 (422)
T ss_dssp EEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred hhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 3356788999999999998765443
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-18 Score=138.20 Aligned_cols=144 Identities=19% Similarity=0.141 Sum_probs=105.9
Q ss_pred CCCeEEEecCC-------------------CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cC--CCeEEEEc
Q 024900 5 KSHRVYSIDLI-------------------GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VK--DQAFFICN 60 (261)
Q Consensus 5 ~~~~V~~~Dl~-------------------G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~--~~~~lvGh 60 (261)
.+|+|+++|+| |+|.|... ..+++.++++++..+++.+ +. ++++|+||
T Consensus 52 ~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 123 (226)
T 3cn9_A 52 PSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAI--------DEDQLNASADQVIALIDEQRAKGIAAERIILAGF 123 (226)
T ss_dssp TTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCB--------CHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred CCcEEEeecCCCCccccCCCCccccccccccccccccc--------cchhHHHHHHHHHHHHHHHHHcCCCcccEEEEEE
Confidence 78999997766 66654321 2357889999999999887 55 58999999
Q ss_pred ChhHHHHHHHHh-hCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcC
Q 024900 61 SIGGLVGLQAAV-MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN 139 (261)
Q Consensus 61 S~Gg~va~~~a~-~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (261)
||||.+++.+|. .+|++++++|++++..... . .+
T Consensus 124 S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~-------------------------~-------------------~~- 158 (226)
T 3cn9_A 124 SQGGAVVLHTAFRRYAQPLGGVLALSTYAPTF-------------------------D-------------------DL- 158 (226)
T ss_dssp THHHHHHHHHHHHTCSSCCSEEEEESCCCGGG-------------------------G-------------------GC-
T ss_pred CHHHHHHHHHHHhcCccCcceEEEecCcCCCc-------------------------h-------------------hh-
Confidence 999999999999 9999999999998642110 0 00
Q ss_pred CCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC----Ccc
Q 024900 140 DTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS----VED 215 (261)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~ 215 (261)
+ . ....+++|+++++|++|.++|.+..+.+.+..+ +.+
T Consensus 159 ~-----------------------------------~---~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~ 200 (226)
T 3cn9_A 159 A-----------------------------------L---DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVG 200 (226)
T ss_dssp C-----------------------------------C---CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEE
T ss_pred h-----------------------------------h---cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCcee
Confidence 0 0 013467899999999999999887655443322 578
Q ss_pred EEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 216 FIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 216 ~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
+++++ +||..+.+.+++ +.+||++
T Consensus 201 ~~~~~-~gH~~~~~~~~~----i~~~l~~ 224 (226)
T 3cn9_A 201 WHDYP-MGHEVSLEEIHD----IGAWLRK 224 (226)
T ss_dssp EEEES-CCSSCCHHHHHH----HHHHHHH
T ss_pred EEEec-CCCCcchhhHHH----HHHHHHh
Confidence 99999 999987776654 4455544
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.75 E-value=9.3e-19 Score=139.67 Aligned_cols=149 Identities=14% Similarity=0.103 Sum_probs=101.4
Q ss_pred cCCCCeEEEe--cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---HH----HHh--cCCCeEEEEcChhHHHHHHHH
Q 024900 3 LAKSHRVYSI--DLIGYGYSDKPNPRDFFDKPFYTFETWASQLND---FC----KDV--VKDQAFFICNSIGGLVGLQAA 71 (261)
Q Consensus 3 L~~~~~V~~~--Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~---~~----~~l--~~~~~~lvGhS~Gg~va~~~a 71 (261)
|+++|.|+++ |++|+|.|....... ...++...+.+++.+ ++ +.. ..++++++||||||.+++.+|
T Consensus 61 l~~g~~v~~~~~d~~g~g~s~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 137 (226)
T 2h1i_A 61 VDSEASVLSVRGNVLENGMPRFFRRLA---EGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLL 137 (226)
T ss_dssp HHTTSCEEEECCSEEETTEEESSCEEE---TTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHH
T ss_pred hccCceEEEecCcccCCcchhhccccC---ccCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHH
Confidence 5568999999 999999986432110 123455665555443 33 233 347899999999999999999
Q ss_pred hhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHH
Q 024900 72 VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEK 151 (261)
Q Consensus 72 ~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (261)
..+|++++++|++++.... . .
T Consensus 138 ~~~~~~~~~~v~~~~~~~~--------~--~------------------------------------------------- 158 (226)
T 2h1i_A 138 FHYENALKGAVLHHPMVPR--------R--G------------------------------------------------- 158 (226)
T ss_dssp HHCTTSCSEEEEESCCCSC--------S--S-------------------------------------------------
T ss_pred HhChhhhCEEEEeCCCCCc--------C--c-------------------------------------------------
Confidence 9999999999999864210 0 0
Q ss_pred HhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC----CCccEEEcCCCCCCCC
Q 024900 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----SVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~ 227 (261)
......+++|+++++|++|.+++.+..+.+.+.. ...++ +++++||..+
T Consensus 159 --------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~ 211 (226)
T 2h1i_A 159 --------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLT 211 (226)
T ss_dssp --------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCC
T ss_pred --------------------------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC
Confidence 0011235789999999999999987655544322 23455 8999999986
Q ss_pred CCChhhHHHHHHHHHHh
Q 024900 228 DEAPHLVNPLVESFVTR 244 (261)
Q Consensus 228 ~e~p~~~~~~l~~fl~~ 244 (261)
.+.+ +.+.+|+++
T Consensus 212 ~~~~----~~~~~~l~~ 224 (226)
T 2h1i_A 212 MGEV----EKAKEWYDK 224 (226)
T ss_dssp HHHH----HHHHHHHHH
T ss_pred HHHH----HHHHHHHHH
Confidence 5444 445556544
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=141.04 Aligned_cols=188 Identities=13% Similarity=0.072 Sum_probs=114.6
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCccc----ccce
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI----CRGM 81 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~~l 81 (261)
+|+|+++|+||.+.... .+.++++++.+..+++.++.++++|+||||||.+|+.+|..+|++ ++++
T Consensus 127 g~~vi~~D~r~~~~~~~----------~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~l 196 (326)
T 3d7r_A 127 LYEVVLPIYPKTPEFHI----------DDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKL 196 (326)
T ss_dssp CSEEEEECCCCTTTSCH----------HHHHHHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEEeCCCCCCCCc----------hHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeE
Confidence 79999999999765421 135677777777777777888999999999999999999999888 9999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++...... ..+ ....... .... .........+.......... ....
T Consensus 197 vl~~p~~~~~~--~~~----~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~--------------~~~~ 245 (326)
T 3d7r_A 197 YLISPILDATL--SNK----DISDALI---EQDA--------VLSQFGVNEIMKKWANGLPL--------------TDKR 245 (326)
T ss_dssp EEESCCCCTTC--CCT----TCCHHHH---HHCS--------SCCHHHHHHHHHHHHTTSCT--------------TSTT
T ss_pred EEECcccccCc--CCh----hHHhhhc---ccCc--------ccCHHHHHHHHHHhcCCCCC--------------CCCe
Confidence 99987542210 000 0000000 0000 00000010000000000000 0000
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch--hhhhhccCCCCccEEEcCCCCCCCCC---CChhhHHH
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQD---EAPHLVNP 236 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~~---e~p~~~~~ 236 (261)
.... ...+..+ +|||+++|++|..++.. ..+.+.+..++.++++++++||..+. ++++++++
T Consensus 246 -----------~~~~-~~~~~~~-~P~lii~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~ 312 (326)
T 3d7r_A 246 -----------ISPI-NGTIEGL-PPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIK 312 (326)
T ss_dssp -----------TSGG-GSCCTTC-CCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHH
T ss_pred -----------ECcc-cCCcccC-CCEEEEEeCcccchHHHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHH
Confidence 0000 0112222 69999999999754422 22334455556899999999999887 88999999
Q ss_pred HHHHHHHhcCC
Q 024900 237 LVESFVTRHAT 247 (261)
Q Consensus 237 ~l~~fl~~~~~ 247 (261)
.+.+||+++..
T Consensus 313 ~i~~fl~~~l~ 323 (326)
T 3d7r_A 313 QIAKSIDEDVT 323 (326)
T ss_dssp HHHHHHTSCCC
T ss_pred HHHHHHHHHhh
Confidence 99999987653
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.73 E-value=9.7e-19 Score=144.60 Aligned_cols=171 Identities=12% Similarity=0.004 Sum_probs=107.2
Q ss_pred CCCCeEEEecCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCccc--
Q 024900 4 AKSHRVYSIDLIGYGYS--DKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEI-- 77 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S--~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~-- 77 (261)
..+|+|+++|+||+|.+ ..+. ...++...++.+.+..+.+++ ++++|+||||||.+++.+|..+|++
T Consensus 78 ~~G~~v~~~d~~g~~~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~ 150 (283)
T 3bjr_A 78 GHGYQAFYLEYTLLTDQQPLGLA-------PVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVA 150 (283)
T ss_dssp TTTCEEEEEECCCTTTCSSCBTH-------HHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHH
T ss_pred hCCcEEEEEeccCCCccccCchh-------HHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccch
Confidence 35799999999999998 3211 011222233333333333344 4899999999999999999999987
Q ss_pred -----------ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcH
Q 024900 78 -----------CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTE 146 (261)
Q Consensus 78 -----------v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (261)
++++|++++..... ..+.... .. +...+.
T Consensus 151 ~~~~~~~~~~~~~~~v~~~p~~~~~---------~~~~~~~--------------------~~----~~~~~~------- 190 (283)
T 3bjr_A 151 TELNVTPAMLKPNNVVLGYPVISPL---------LGFPKDD--------------------AT----LATWTP------- 190 (283)
T ss_dssp HHHTCCHHHHCCSSEEEESCCCCTT---------SBC--------------------------------CCCC-------
T ss_pred hhcCCCcCCCCccEEEEcCCccccc---------ccccccc--------------------ch----HHHHHH-------
Confidence 88888877542110 0000000 00 000000
Q ss_pred HHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc----CCCCccEEEcCCC
Q 024900 147 ELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNV 222 (261)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~i~~~ 222 (261)
. . .. ......+.++++|+|+|+|++|.++|++.++.+.+ .....++++++++
T Consensus 191 ------------~-~-------~~----~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~ 246 (283)
T 3bjr_A 191 ------------T-P-------NE----LAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHG 246 (283)
T ss_dssp ------------C-G-------GG----GCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred ------------H-h-------Hh----cCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 0 0 00 00122356789999999999999999776554433 2233589999999
Q ss_pred CCCCCCCCh-------------hhHHHHHHHHHHhc
Q 024900 223 GHCPQDEAP-------------HLVNPLVESFVTRH 245 (261)
Q Consensus 223 gH~~~~e~p-------------~~~~~~l~~fl~~~ 245 (261)
||....+.| +++.+.+.+||+++
T Consensus 247 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 247 PHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp SHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 997776655 78889999999764
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-17 Score=142.15 Aligned_cols=189 Identities=16% Similarity=0.050 Sum_probs=112.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH------hcCC-CeEEEEcChhHHHHHHHHhhCcc-
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD------VVKD-QAFFICNSIGGLVGLQAAVMEPE- 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~------l~~~-~~~lvGhS~Gg~va~~~a~~~p~- 76 (261)
.+|.|+++|+||++.+..+ ..+++..+.+..+.+. ++.+ +++|+||||||.+++.+|.++|+
T Consensus 145 ~g~~vv~~d~rg~~~~~~~----------~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~ 214 (351)
T 2zsh_A 145 CKCVVVSVNYRRAPENPYP----------CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES 214 (351)
T ss_dssp HTSEEEEECCCCTTTSCTT----------HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEecCCCCCCCCCc----------hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhcc
Confidence 5799999999998876432 1344444444433332 2346 89999999999999999999998
Q ss_pred --cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 024900 77 --ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (261)
Q Consensus 77 --~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (261)
+|+++|++++..... . . ........... .........++.. +..
T Consensus 215 ~~~v~~~vl~~p~~~~~---~-----~--~~~~~~~~~~~---------~~~~~~~~~~~~~---------------~~~ 260 (351)
T 2zsh_A 215 GIDVLGNILLNPMFGGN---E-----R--TESEKSLDGKY---------FVTVRDRDWYWKA---------------FLP 260 (351)
T ss_dssp TCCCCEEEEESCCCCCS---S-----C--CHHHHHHTTTS---------SCCHHHHHHHHHH---------------HSC
T ss_pred CCCeeEEEEECCccCCC---c-----C--ChhhhhcCCCc---------ccCHHHHHHHHHH---------------hCC
Confidence 999999998753211 0 0 00000000000 0001001111110 100
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCCCC-CEEEEecCCCCCCCch--hhhhhccCCCCccEEEcCCCCCCCCC---
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKC-PVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQD--- 228 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~~--- 228 (261)
...... .. ...........+.++++ |+|+++|++|.+++.. ..+.+.+...+.++++++++||..+.
T Consensus 261 ~~~~~~--~~-----~~~~~~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~ 333 (351)
T 2zsh_A 261 EGEDRE--HP-----ACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPN 333 (351)
T ss_dssp TTCCTT--ST-----TTCTTSTTSCCCTTCCCCEEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSC
T ss_pred CCCCCC--Cc-----ccCCCCCCccchhhCCCCCEEEEEcCCCcchHHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCC
Confidence 000000 00 00000001234667777 9999999999987632 23334444446899999999999887
Q ss_pred -CChhhHHHHHHHHHHh
Q 024900 229 -EAPHLVNPLVESFVTR 244 (261)
Q Consensus 229 -e~p~~~~~~l~~fl~~ 244 (261)
++++++.+.+.+||++
T Consensus 334 ~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 334 NNHFHNVMDEISAFVNA 350 (351)
T ss_dssp SHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhcC
Confidence 8899999999999975
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.9e-17 Score=134.21 Aligned_cols=170 Identities=14% Similarity=0.084 Sum_probs=112.8
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---------cCCCeEEEEcChhHHHHHHHHhh-
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---------VKDQAFFICNSIGGLVGLQAAVM- 73 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---------~~~~~~lvGhS~Gg~va~~~a~~- 73 (261)
+.+|.|+++|+||+|.|... .++....+|+.+.++.+ ..++++|+||||||.+++.+|..
T Consensus 71 ~~G~~v~~~d~~g~g~s~~~----------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (276)
T 3hxk_A 71 AQGYQVLLLNYTVMNKGTNY----------NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSE 140 (276)
T ss_dssp HTTCEEEEEECCCTTSCCCS----------CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSC
T ss_pred HCCCEEEEecCccCCCcCCC----------CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhc
Confidence 36899999999999998632 13445555555444333 23589999999999999999998
Q ss_pred CcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 024900 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (261)
Q Consensus 74 ~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
++.+++++|++++....... +.... .. .. + +.++
T Consensus 141 ~~~~~~~~v~~~p~~~~~~~----~~~~~------------~~-----~~--------------~-----~~~~------ 174 (276)
T 3hxk_A 141 QIHRPKGVILCYPVTSFTFG----WPSDL------------SH-----FN--------------F-----EIEN------ 174 (276)
T ss_dssp STTCCSEEEEEEECCBTTSS----CSSSS------------SS-----SC--------------C-----CCSC------
T ss_pred cCCCccEEEEecCcccHHhh----CCcch------------hh-----hh--------------c-----Cchh------
Confidence 79999999999875332100 00000 00 00 0 0000
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh----ccCCCCccEEEcCCCCCCCCCC
Q 024900 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY----GNFDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~----~~~~~~~~~~~i~~~gH~~~~e 229 (261)
. . .. .....+.++++|+|+++|++|.++|.+.++.+ .+.....++++++++||.....
T Consensus 175 -------~-~------~~----~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 236 (276)
T 3hxk_A 175 -------I-S------EY----NISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLA 236 (276)
T ss_dssp -------C-G------GG----BTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTC
T ss_pred -------h-h------hC----ChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCcccc
Confidence 0 0 00 01133567899999999999999998765443 3333346899999999987765
Q ss_pred Ch-------------hhHHHHHHHHHHhcCC
Q 024900 230 AP-------------HLVNPLVESFVTRHAT 247 (261)
Q Consensus 230 ~p-------------~~~~~~l~~fl~~~~~ 247 (261)
.+ +++.+.+.+||+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~ 267 (276)
T 3hxk_A 237 NRTTAPSDAYCLPSVHRWVSWASDWLERQIK 267 (276)
T ss_dssp STTSCSSSTTCCHHHHTHHHHHHHHHHHHHH
T ss_pred CccccccccccCchHHHHHHHHHHHHHhCcc
Confidence 55 6788888899987543
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=1e-17 Score=147.83 Aligned_cols=203 Identities=15% Similarity=0.128 Sum_probs=113.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
+.+|+|+++|+||+|.+..+. ..+.++++.+.+..+.+..++ +++.|+||||||.+++.+|..+|+ |+++
T Consensus 197 ~~Gy~Vla~D~rG~~~~~~~~-------~~~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~ 268 (446)
T 3hlk_A 197 GKGFAVMALAYYNYEDLPKTM-------ETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAA 268 (446)
T ss_dssp TTTCEEEEECCSSSTTSCSCC-------SEEEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEE
T ss_pred hCCCEEEEeccCCCCCCCcch-------hhCCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEE
Confidence 468999999999999886532 224566665555444444333 689999999999999999999998 9999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
|++++......... ....... ...... ..... ..... . .. +...+..... .
T Consensus 269 V~~~~~~~~~~~~~-~~~~~~~----------~~~~~~-~~~~~------------~~~~~-~-~~-~~~~~~~~~~--~ 319 (446)
T 3hlk_A 269 VVINGSVANVGGTL-RYKGETL----------PPVGVN-RNRIK------------VTKDG-Y-AD-IVDVLNSPLE--G 319 (446)
T ss_dssp EEESCCSBCCSSEE-EETTEEE----------CCCCBC-GGGCE------------ECSSS-C-EE-CTTCBCCTTS--G
T ss_pred EEEcCcccccCCCc-cccCccC----------Cccccc-hhccc------------cccch-H-HH-HHHHHhchhh--c
Confidence 99987532110000 0000000 000000 00000 00000 0 00 0000000000 0
Q ss_pred HHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch-hhh----hhccCC-CCccEEEcCCCCCCC---------
Q 024900 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGR----AYGNFD-SVEDFIVLPNVGHCP--------- 226 (261)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~-~~~----~~~~~~-~~~~~~~i~~~gH~~--------- 226 (261)
. . ......+.++++|+|+|+|++|.++|.+ .++ .+.+.. ++.++++++++||..
T Consensus 320 ~-------~----~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~p~~P~~~ 388 (446)
T 3hlk_A 320 P-------D----QKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLCR 388 (446)
T ss_dssp G-------G----GGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCSTTCCCCC
T ss_pred c-------c----cccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECCCCCCCCh
Confidence 0 0 0001225678999999999999999983 222 233332 337999999999997
Q ss_pred -------------------CCCChhhHHHHHHHHHHhcCCCCCcccc
Q 024900 227 -------------------QDEAPHLVNPLVESFVTRHATPPASVSA 254 (261)
Q Consensus 227 -------------------~~e~p~~~~~~l~~fl~~~~~~~~~~~~ 254 (261)
+.+.++++.+.+.+||+++...+..+.+
T Consensus 389 ~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~~~~~~ 435 (446)
T 3hlk_A 389 ASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIP 435 (446)
T ss_dssp BC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred hhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCCCCCCc
Confidence 2334677889999999998776554443
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.7e-17 Score=135.77 Aligned_cols=192 Identities=14% Similarity=0.067 Sum_probs=112.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCC-----------CCCCCCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHH
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPR-----------DFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLV 66 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~-----------~~~~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~v 66 (261)
+.+|.|+++|+||+|.|..+... ...+...|.+...++|+.++++.+. .+++.++|||+||.+
T Consensus 107 ~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~ 186 (318)
T 1l7a_A 107 LHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGL 186 (318)
T ss_dssp HTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHH
T ss_pred hCCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHH
Confidence 46899999999999999754210 0001123445677888877776663 267999999999999
Q ss_pred HHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcH
Q 024900 67 GLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTE 146 (261)
Q Consensus 67 a~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (261)
++.+|..+|+ +.++|++++.... +. ............ .....+.. .. ..
T Consensus 187 a~~~a~~~~~-~~~~v~~~p~~~~------------~~-~~~~~~~~~~~~-----------~~~~~~~~-~~-----~~ 235 (318)
T 1l7a_A 187 TIAAAALSDI-PKAAVADYPYLSN------------FE-RAIDVALEQPYL-----------EINSFFRR-NG-----SP 235 (318)
T ss_dssp HHHHHHHCSC-CSEEEEESCCSCC------------HH-HHHHHCCSTTTT-----------HHHHHHHH-SC-----CH
T ss_pred HHHHhccCCC-ccEEEecCCcccC------------HH-HHHhcCCcCccH-----------HHHHHHhc-cC-----Cc
Confidence 9999999986 7778776553211 00 000000000000 00000000 00 00
Q ss_pred HHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEEcCCCCCC
Q 024900 147 ELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHC 225 (261)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~ 225 (261)
...... +..... ......+.++++|+|+++|++|.++|.+....+.+ +....++++++++||.
T Consensus 236 ~~~~~~------------~~~~~~----~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~ 299 (318)
T 1l7a_A 236 ETEVQA------------MKTLSY----FDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHE 299 (318)
T ss_dssp HHHHHH------------HHHHHT----TCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSS
T ss_pred ccHHHH------------HHhhcc----ccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCC
Confidence 000000 000000 00112355678999999999999999877655544 3334789999999999
Q ss_pred CCCCChhhHHHHHHHHHHhcC
Q 024900 226 PQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 226 ~~~e~p~~~~~~l~~fl~~~~ 246 (261)
. +.++.+.+.+|++++.
T Consensus 300 ~----~~~~~~~~~~fl~~~l 316 (318)
T 1l7a_A 300 Y----IPAFQTEKLAFFKQIL 316 (318)
T ss_dssp C----CHHHHHHHHHHHHHHH
T ss_pred C----cchhHHHHHHHHHHHh
Confidence 2 3456777778887653
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=155.03 Aligned_cols=179 Identities=12% Similarity=0.028 Sum_probs=116.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
+.+|.|+++|+||+|.|..+.... ....+.. ...+|+.+.++.+. .+++.|+||||||.+++.+|..+|++
T Consensus 517 ~~G~~v~~~d~rG~g~s~~~~~~~--~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~ 593 (706)
T 2z3z_A 517 QKGYAVFTVDSRGSANRGAAFEQV--IHRRLGQ-TEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDV 593 (706)
T ss_dssp HTTCEEEEECCTTCSSSCHHHHHT--TTTCTTH-HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTT
T ss_pred hCCcEEEEEecCCCcccchhHHHH--HhhccCC-ccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCc
Confidence 368999999999999986431100 0011221 23455666665553 45799999999999999999999999
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
++++|++++.... . .+...+ . ...+ .. ....++.+
T Consensus 594 ~~~~v~~~~~~~~--------~--~~~~~~--------------~--------~~~~----~~-~~~~~~~~-------- 628 (706)
T 2z3z_A 594 FKVGVAGGPVIDW--------N--RYAIMY--------------G--------ERYF----DA-PQENPEGY-------- 628 (706)
T ss_dssp EEEEEEESCCCCG--------G--GSBHHH--------------H--------HHHH----CC-TTTCHHHH--------
T ss_pred EEEEEEcCCccch--------H--HHHhhh--------------h--------hhhc----CC-cccChhhh--------
Confidence 9999998864211 0 000000 0 0000 00 00011111
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC----CCCccEEEcCCCCCCCCCCChhh
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
... .....+.++++|+|+|+|++|..+|++.++.+.+. ....++.++|++||.++.++|++
T Consensus 629 --------~~~-------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~ 693 (706)
T 2z3z_A 629 --------DAA-------NLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVH 693 (706)
T ss_dssp --------HHH-------CGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHH
T ss_pred --------hhC-------CHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHH
Confidence 000 01233567889999999999999998876554332 22358999999999999889999
Q ss_pred HHHHHHHHHHhc
Q 024900 234 VNPLVESFVTRH 245 (261)
Q Consensus 234 ~~~~l~~fl~~~ 245 (261)
+.+.+.+|++++
T Consensus 694 ~~~~i~~fl~~~ 705 (706)
T 2z3z_A 694 LYETITRYFTDH 705 (706)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.9e-17 Score=138.29 Aligned_cols=190 Identities=14% Similarity=0.142 Sum_probs=112.4
Q ss_pred CCCCeEEEecCCCCCCCCCCC--CC----------------CCCCCCCCCHHHHHHHHHHHHHHhc------CCCeEEEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPN--PR----------------DFFDKPFYTFETWASQLNDFCKDVV------KDQAFFIC 59 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~--~~----------------~~~~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvG 59 (261)
+.+|.|+++|+||+|.|.... .. ...+...|++...++|+.++++.+. .+++.++|
T Consensus 119 ~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G 198 (337)
T 1vlq_A 119 SMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAG 198 (337)
T ss_dssp HTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEE
T ss_pred hCCCEEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 478999999999999775320 00 0011123456678888888887772 35899999
Q ss_pred cChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcC
Q 024900 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN 139 (261)
Q Consensus 60 hS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (261)
||+||.+++.+|..+| +++++|++++..... .. .......... . .....+.. .
T Consensus 199 ~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~~------------~~-~~~~~~~~~~-----~------~~~~~~~~-~- 251 (337)
T 1vlq_A 199 GSQGGGIALAVSALSK-KAKALLCDVPFLCHF------------RR-AVQLVDTHPY-----A------EITNFLKT-H- 251 (337)
T ss_dssp ETHHHHHHHHHHHHCS-SCCEEEEESCCSCCH------------HH-HHHHCCCTTH-----H------HHHHHHHH-C-
T ss_pred eCHHHHHHHHHHhcCC-CccEEEECCCcccCH------------HH-HHhcCCCcch-----H------HHHHHHHh-C-
Confidence 9999999999999998 599998877632110 00 0000000000 0 00000100 0
Q ss_pred CCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc-CCCCccEEE
Q 024900 140 DTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIV 218 (261)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~ 218 (261)
....++.+..+ ..+ .....+.++++|+|+++|++|..+|++....+.+ +....++.+
T Consensus 252 --~~~~~~~~~~~----------------~~~----~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~ 309 (337)
T 1vlq_A 252 --RDKEEIVFRTL----------------SYF----DGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRI 309 (337)
T ss_dssp --TTCHHHHHHHH----------------HTT----CHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEE
T ss_pred --chhHHHHHHhh----------------hhc----cHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEE
Confidence 00001111100 000 0112345678999999999999999887665443 443478999
Q ss_pred cCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 219 LPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 219 i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
++++||... .++..+.+.+||.+.
T Consensus 310 ~~~~gH~~~---~~~~~~~~~~fl~~~ 333 (337)
T 1vlq_A 310 YPYNNHEGG---GSFQAVEQVKFLKKL 333 (337)
T ss_dssp ETTCCTTTT---HHHHHHHHHHHHHHH
T ss_pred cCCCCCCCc---chhhHHHHHHHHHHH
Confidence 999999953 234556666676654
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=7e-17 Score=132.76 Aligned_cols=170 Identities=9% Similarity=0.013 Sum_probs=100.1
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHhcC--CCeEEEEcChhHHHHHHHHhhC-----
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF---CKDVVK--DQAFFICNSIGGLVGLQAAVME----- 74 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~---~~~l~~--~~~~lvGhS~Gg~va~~~a~~~----- 74 (261)
.+|+|+++|+||||.+.. . ......+..+.+..+ ...+++ +++.|+||||||.+++.+|..+
T Consensus 64 ~G~~v~~~d~~g~g~~~~-~-------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~ 135 (277)
T 3bxp_A 64 AGMHTVVLNYQLIVGDQS-V-------YPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPEL 135 (277)
T ss_dssp TTCEEEEEECCCSTTTCC-C-------TTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHH
T ss_pred CCCEEEEEecccCCCCCc-c-------CchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCccc
Confidence 679999999999994432 1 111233333322222 222233 5899999999999999999985
Q ss_pred ---------cccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCc
Q 024900 75 ---------PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVT 145 (261)
Q Consensus 75 ---------p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (261)
|.+++++|++++...... .+. . . ....
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~p~~~~~~----~~~-~--~-----------------------~~~~-------------- 171 (277)
T 3bxp_A 136 RTRYHLDHYQGQHAAIILGYPVIDLTA----GFP-T--T-----------------------SAAR-------------- 171 (277)
T ss_dssp HHHTTCTTCCCCCSEEEEESCCCBTTS----SSS-S--S-----------------------HHHH--------------
T ss_pred ccccCcccccCCcCEEEEeCCcccCCC----CCC-C--c-----------------------cccc--------------
Confidence 778999999887532110 000 0 0 0000
Q ss_pred HHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhc----cCCCCccEEEcCC
Q 024900 146 EELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG----NFDSVEDFIVLPN 221 (261)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~i~~ 221 (261)
..++.. .. . ......+.++.+|+|+++|++|.++|.+.++.+. +.....+++++++
T Consensus 172 ----~~~~~~-~~-----------~----~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~ 231 (277)
T 3bxp_A 172 ----NQITTD-AR-----------L----WAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGS 231 (277)
T ss_dssp ----HHHCSC-GG-----------G----SBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ----hhccch-hh-----------h----cCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 000000 00 0 0011234567899999999999999987655433 2333468999999
Q ss_pred CCCCCCCCC---------------hhhHHHHHHHHHHhcC
Q 024900 222 VGHCPQDEA---------------PHLVNPLVESFVTRHA 246 (261)
Q Consensus 222 ~gH~~~~e~---------------p~~~~~~l~~fl~~~~ 246 (261)
+||...... ++++.+.+.+||+++.
T Consensus 232 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 232 GIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp C----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 999655443 4778889999998753
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.71 E-value=4.2e-17 Score=138.42 Aligned_cols=197 Identities=13% Similarity=0.043 Sum_probs=108.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--------hcCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD--------VVKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~--------l~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
.+|.|+++|+||+|.+..+ ..+++..+.+..+.+. ++.++++|+||||||.+++.+|.++|+
T Consensus 115 ~g~~vv~~d~rg~~~~~~~----------~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~ 184 (338)
T 2o7r_A 115 AGVVIASVDYRLAPEHRLP----------AAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAA 184 (338)
T ss_dssp HTCEEEEEECCCTTTTCTT----------HHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHT
T ss_pred CCcEEEEecCCCCCCCCCc----------hHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhcc
Confidence 5799999999998876432 1233333333222221 233689999999999999999999998
Q ss_pred --------cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHH
Q 024900 77 --------ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEEL 148 (261)
Q Consensus 77 --------~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (261)
+|+++|++++...... . ......... .. .........++............
T Consensus 185 ~~~~~~~~~v~~~vl~~p~~~~~~--------~--~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~-- 243 (338)
T 2o7r_A 185 VADELLPLKIKGLVLDEPGFGGSK--------R--TGSELRLAN-DS--------RLPTFVLDLIWELSLPMGADRDH-- 243 (338)
T ss_dssp THHHHTTCCEEEEEEESCCCCCSS--------C--CHHHHHTTT-CS--------SSCHHHHHHHHHHHSCTTCCTTS--
T ss_pred ccccCCCCceeEEEEECCccCCCc--------C--ChhhhccCC-Cc--------ccCHHHHHHHHHHhCCCCCCCCC--
Confidence 8999999987532110 0 000000000 00 00000011111111100000000
Q ss_pred HHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch--hhhhhccCCCCccEEEcCCCCCCC
Q 024900 149 VEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCP 226 (261)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~ 226 (261)
+........ . .....+.+..+++|||+++|++|.+++.. ..+.+.+..+..++.+++++||..
T Consensus 244 ------~~~~~~~~~--------~-~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~gH~~ 308 (338)
T 2o7r_A 244 ------EYCNPTAES--------E-PLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERLEKKGVDVVAQFDVGGYHAV 308 (338)
T ss_dssp ------TTTCCC-------------CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHHHHHTTCEEEEEEESSCCTTG
T ss_pred ------cccCCCCCC--------c-ccccHhhhcCCCCCEEEEECCCCcchHHHHHHHHHHHHCCCcEEEEEECCCceEE
Confidence 000000000 0 00000123446789999999999988743 234455455567999999999999
Q ss_pred CCCCh---hhHHHHHHHHHHhcCC
Q 024900 227 QDEAP---HLVNPLVESFVTRHAT 247 (261)
Q Consensus 227 ~~e~p---~~~~~~l~~fl~~~~~ 247 (261)
++++| +++.+.+.+|++++..
T Consensus 309 ~~~~~~~~~~~~~~i~~Fl~~~~~ 332 (338)
T 2o7r_A 309 KLEDPEKAKQFFVILKKFVVDSCT 332 (338)
T ss_dssp GGTCHHHHHHHHHHHHHHHC----
T ss_pred eccChHHHHHHHHHHHHHHHhhcc
Confidence 88887 8899999999987643
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=4e-17 Score=131.10 Aligned_cols=163 Identities=11% Similarity=0.055 Sum_probs=109.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHHHhc-----CCCeEEEEcChhHHHHHHHHhh
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFF-----DKPFYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~-----~~~~~~~~~~a~dl~~~~~~l~-----~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
+.+|.|+++|++|+|.+...... .. ....++....++|+.++++.+. .+++.++||||||.+++.++..
T Consensus 57 ~~G~~v~~~d~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~ 135 (241)
T 3f67_A 57 QEGYLAIAPELYFRQGDPNEYHD-IPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAH 135 (241)
T ss_dssp HTTCEEEEECTTTTTCCGGGCCS-HHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTT
T ss_pred HCCcEEEEecccccCCCCCchhh-HHHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhh
Confidence 46899999999999877543210 00 0012345677888888888775 3579999999999999999999
Q ss_pred CcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 024900 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (261)
Q Consensus 74 ~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
+|+ +.++|++.+.... .. .. + ...++
T Consensus 136 ~~~-~~~~v~~~~~~~~-----~~---~~-----------------------------------~---~~~~~------- 161 (241)
T 3f67_A 136 NPQ-LKAAVAWYGKLVG-----EK---SL-----------------------------------N---SPKHP------- 161 (241)
T ss_dssp CTT-CCEEEEESCCCSC-----CC---CS-----------------------------------S---SCCCH-------
T ss_pred CcC-cceEEEEeccccC-----CC---cc-----------------------------------C---CccCH-------
Confidence 997 7777665543110 00 00 0 00000
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc----CCCCccEEEcCCCCCCCCCC
Q 024900 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~i~~~gH~~~~e 229 (261)
...+.++++|+|+++|++|.++|.+..+.+.+ ..+..++.+++++||..+.+
T Consensus 162 ------------------------~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 217 (241)
T 3f67_A 162 ------------------------VDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNAD 217 (241)
T ss_dssp ------------------------HHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCT
T ss_pred ------------------------HHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecC
Confidence 01134567999999999999999876554432 23567999999999987643
Q ss_pred --------ChhhHHHHHHHHHHhc
Q 024900 230 --------APHLVNPLVESFVTRH 245 (261)
Q Consensus 230 --------~p~~~~~~l~~fl~~~ 245 (261)
..+++.+.+.+||+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 218 YRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp TSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHHHHHhhC
Confidence 2356778888898753
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.2e-17 Score=132.67 Aligned_cols=144 Identities=9% Similarity=-0.074 Sum_probs=103.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------HhcCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK--------DVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~--------~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
.+|+|+++|+||. ..+ .++....+.+.+... .++.++++++||||||.+++.+| .++
T Consensus 75 ~G~~v~~~d~~~s---~~~----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~ 139 (258)
T 2fx5_A 75 HGFVVAAAETSNA---GTG----------REMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDT 139 (258)
T ss_dssp HTCEEEEECCSCC---TTS----------HHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TST
T ss_pred CCeEEEEecCCCC---ccH----------HHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCc
Confidence 4799999999963 111 123344444444332 34557899999999999999998 567
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
+++++|++++... . ..
T Consensus 140 ~v~~~v~~~~~~~------------~-----------------------------------~~----------------- 155 (258)
T 2fx5_A 140 RVRTTAPIQPYTL------------G-----------------------------------LG----------------- 155 (258)
T ss_dssp TCCEEEEEEECCS------------S-----------------------------------TT-----------------
T ss_pred CeEEEEEecCccc------------c-----------------------------------cc-----------------
Confidence 8999998775210 0 00
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchh-hhhhc-cCCCCccEEEcCCCCCCCCCCChhhH
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYG-NFDSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~-~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
.....+.++++|+|+|+|++|.+++.+. .+.+. ....+.++++++++||+.+.++++++
T Consensus 156 -------------------~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~ 216 (258)
T 2fx5_A 156 -------------------HDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAY 216 (258)
T ss_dssp -------------------CCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGG
T ss_pred -------------------cchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccchHHHH
Confidence 0011245678999999999999999875 54443 33345789999999999999999999
Q ss_pred HHHHHHHHHhcC
Q 024900 235 NPLVESFVTRHA 246 (261)
Q Consensus 235 ~~~l~~fl~~~~ 246 (261)
++.+.+|++++.
T Consensus 217 ~~~i~~fl~~~l 228 (258)
T 2fx5_A 217 RGPSTAWFRFQL 228 (258)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998543
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.5e-17 Score=137.19 Aligned_cols=192 Identities=14% Similarity=0.029 Sum_probs=114.4
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCcc----ccc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPE----ICR 79 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~----~v~ 79 (261)
+|+|+++|+||+|.|..+. ...+....++.+.+.++.+++ ++++|+|||+||.+++.+|..+|+ +++
T Consensus 104 g~~v~~~d~rg~g~~~~~~-------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 176 (311)
T 2c7b_A 104 DSVVVSVDYRLAPEYKFPT-------AVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVK 176 (311)
T ss_dssp TCEEEEECCCCTTTSCTTH-------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCCCCCCCCCc-------cHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCce
Confidence 7999999999999986542 123455556666666666666 689999999999999999999887 499
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|++++..... .. .......+.. .... .........+.........
T Consensus 177 ~~vl~~p~~~~~---~~---~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~~~~~----------------- 223 (311)
T 2c7b_A 177 KQVLIYPVVNMT---GV---PTASLVEFGV-AETT---------SLPIELMVWFGRQYLKRPE----------------- 223 (311)
T ss_dssp EEEEESCCCCCS---SC---CCHHHHHHHH-CTTC---------SSCHHHHHHHHHHHCSSTT-----------------
T ss_pred eEEEECCccCCc---cc---cccCCccHHH-hccC---------CCCHHHHHHHHHHhCCCCc-----------------
Confidence 999988753210 00 0000000000 0000 0001111110000000000
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh--hhhccCCCCccEEEcCCCCCCCC-----CCChh
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG--RAYGNFDSVEDFIVLPNVGHCPQ-----DEAPH 232 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~--~~~~~~~~~~~~~~i~~~gH~~~-----~e~p~ 232 (261)
...+. .. ......+..+. |+|+++|++|.+++.... +.+.......++++++++||..+ .++++
T Consensus 224 ~~~~~-------~~-~p~~~~l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~ 294 (311)
T 2c7b_A 224 EAYDF-------KA-SPLLADLGGLP-PALVVTAEYDPLRDEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGR 294 (311)
T ss_dssp GGGST-------TT-CGGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHH
T ss_pred cccCc-------cc-CcccccccCCC-cceEEEcCCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHH
Confidence 00000 00 00011344554 999999999998864422 33444555679999999999865 46678
Q ss_pred hHHHHHHHHHHhcC
Q 024900 233 LVNPLVESFVTRHA 246 (261)
Q Consensus 233 ~~~~~l~~fl~~~~ 246 (261)
++.+.+.+||+++.
T Consensus 295 ~~~~~i~~fl~~~l 308 (311)
T 2c7b_A 295 EALDLAAASIRSGL 308 (311)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.70 E-value=6.2e-17 Score=146.92 Aligned_cols=186 Identities=15% Similarity=0.117 Sum_probs=114.7
Q ss_pred CCCCeEEEecCCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 4 AKSHRVYSIDLIG---YGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 4 ~~~~~V~~~Dl~G---~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
+.+|.|+++|+|| ||.|...... .......++++.+.+..+++....+++.|+||||||.+++.+|..+|+++++
T Consensus 387 ~~G~~v~~~d~rG~~~~G~s~~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~ 464 (582)
T 3o4h_A 387 AAGFHVVMPNYRGSTGYGEEWRLKII--GDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKA 464 (582)
T ss_dssp HTTCEEEEECCTTCSSSCHHHHHTTT--TCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSC
T ss_pred hCCCEEEEeccCCCCCCchhHHhhhh--hhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEE
Confidence 4679999999999 7776321100 0001123444444444444332334899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++..... . + ...... . ...+....++ ...+.
T Consensus 465 ~v~~~~~~~~~-------------~-~---~~~~~~---~---------~~~~~~~~~~----~~~~~------------ 499 (582)
T 3o4h_A 465 GVAGASVVDWE-------------E-M---YELSDA---A---------FRNFIEQLTG----GSREI------------ 499 (582)
T ss_dssp EEEESCCCCHH-------------H-H---HHTCCH---H---------HHHHHHHHTT----TCHHH------------
T ss_pred EEEcCCccCHH-------------H-H---hhcccc---h---------hHHHHHHHcC----cCHHH------------
Confidence 99988632110 0 0 000000 0 0000000010 00111
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc----CCCCccEEEcCCCCCCCC-CCChhhHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQ-DEAPHLVN 235 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~i~~~gH~~~-~e~p~~~~ 235 (261)
+. .. .....+.++++|+|+++|++|..+|++.++.+.+ .....+++++|++||..+ .++++++.
T Consensus 500 ----~~---~~----sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~ 568 (582)
T 3o4h_A 500 ----MR---SR----SPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKIL 568 (582)
T ss_dssp ----HH---HT----CGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHH
T ss_pred ----HH---hc----CHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHH
Confidence 10 00 0123356788999999999999999876654432 223478999999999987 67888999
Q ss_pred HHHHHHHHhcCC
Q 024900 236 PLVESFVTRHAT 247 (261)
Q Consensus 236 ~~l~~fl~~~~~ 247 (261)
+.+.+||+++..
T Consensus 569 ~~i~~fl~~~l~ 580 (582)
T 3o4h_A 569 LPAVFFLATQRE 580 (582)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHcC
Confidence 999999987653
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.69 E-value=7.7e-16 Score=127.68 Aligned_cols=70 Identities=14% Similarity=0.121 Sum_probs=60.0
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhC---ccccc---
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVME---PEICR--- 79 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~---p~~v~--- 79 (261)
++|+++|++|. . ..++++++++++.+.++.+.. ++++|+||||||.||+++|.++ |++|.
T Consensus 49 ~~v~~~d~~~~----~---------~~~~~~~~a~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~ 115 (283)
T 3tjm_A 49 IPTYGLQCTRA----A---------PLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 115 (283)
T ss_dssp SCEEEECCCTT----S---------CCSCHHHHHHHHHHHHTTTCCSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred ceEEEEecCCC----C---------CCCCHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccc
Confidence 89999999641 1 236899999999999998865 7899999999999999999976 88899
Q ss_pred ceEEeecchh
Q 024900 80 GMILLNISLR 89 (261)
Q Consensus 80 ~lv~~~~~~~ 89 (261)
++|++++.+.
T Consensus 116 ~lvlid~~~~ 125 (283)
T 3tjm_A 116 SLFLFDGSPT 125 (283)
T ss_dssp EEEEESCCTT
T ss_pred eEEEEcCCch
Confidence 9999998653
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-16 Score=126.73 Aligned_cols=182 Identities=15% Similarity=0.130 Sum_probs=106.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCc---ccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEP---EIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p---~~v 78 (261)
|++ |+|+++|+||+|.. ++++.++++.+.. ++++++||||||.||+++|..++ +.|
T Consensus 40 l~~-~~v~~~d~~g~~~~-------------------~~~~~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v 99 (230)
T 1jmk_C 40 LPS-YKLCAFDFIEEEDR-------------------LDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIV 99 (230)
T ss_dssp CTT-EEEEEECCCCSTTH-------------------HHHHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCE
T ss_pred cCC-CeEEEecCCCHHHH-------------------HHHHHHHHHHhCCCCCeEEEEECHhHHHHHHHHHHHHHcCCCc
Confidence 566 99999999997743 2345556666664 57999999999999999998865 679
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
.++|++++...... ..+........+..+.... .+........+...+..
T Consensus 100 ~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~--- 149 (230)
T 1jmk_C 100 QRIIMVDSYKKQGV---SDLDGRTVESDVEALMNVN------------------------RDNEALNSEAVKHGLKQ--- 149 (230)
T ss_dssp EEEEEESCCEECCC---C--------CCHHHHHHHT------------------------TTCSGGGSHHHHHHHHH---
T ss_pred cEEEEECCCCCCcc---cccccccHHHHHHHHHhcC------------------------hhhhhhhhHHHHHHHHH---
Confidence 99999987532110 0000000000000000000 00000000011100000
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCC--CCCCCChhhHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGH--CPQDEAPHLVN 235 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH--~~~~e~p~~~~ 235 (261)
....+..+.. . ......+++|+++++|++|..++... ..+.+. .++.+++.+++ || +.+.++|++++
T Consensus 150 --~~~~~~~~~~-~-----~~~~~~~~~P~l~i~g~~D~~~~~~~-~~w~~~~~~~~~~~~i~g-~H~~~~~~~~~~~~~ 219 (230)
T 1jmk_C 150 --KTHAFYSYYV-N-----LISTGQVKADIDLLTSGADFDIPEWL-ASWEEATTGAYRMKRGFG-THAEMLQGETLDRNA 219 (230)
T ss_dssp --HHHHHHHHHH-H-----CCCCSCBSSEEEEEECSSCCCCCTTE-ECSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHH
T ss_pred --HHHHHHHHhh-h-----ccccccccccEEEEEeCCCCCCcccc-chHHHhcCCCeEEEEecC-ChHHHcCcHhHHHHH
Confidence 0001111110 0 12356789999999999999877433 223333 34578899997 99 88889999999
Q ss_pred HHHHHHHHh
Q 024900 236 PLVESFVTR 244 (261)
Q Consensus 236 ~~l~~fl~~ 244 (261)
+.|.+||.+
T Consensus 220 ~~i~~~l~~ 228 (230)
T 1jmk_C 220 GILLEFLNT 228 (230)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhh
Confidence 999999965
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.7e-17 Score=151.43 Aligned_cols=179 Identities=10% Similarity=-0.016 Sum_probs=114.8
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHh------cCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTF-ETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~-~~~a~dl~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
+.+|.|+++|+||+|.|..+.... ...++ ...++|+.+.++.+ +.+++.++||||||.+++.+|..+|+
T Consensus 550 ~~G~~v~~~d~rG~g~s~~~~~~~----~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~ 625 (741)
T 2ecf_A 550 QQGYVVFSLDNRGTPRRGRDFGGA----LYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASD 625 (741)
T ss_dssp HTTCEEEEECCTTCSSSCHHHHHT----TTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTT
T ss_pred hCCCEEEEEecCCCCCCChhhhHH----HhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCC
Confidence 468999999999999986431100 00011 11244555544444 24589999999999999999999999
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
+++++|++++..... .+...+ .. ..+ .. .....+
T Consensus 626 ~~~~~v~~~~~~~~~----------~~~~~~-------------~~---------~~~----~~-~~~~~~--------- 659 (741)
T 2ecf_A 626 SYACGVAGAPVTDWG----------LYDSHY-------------TE---------RYM----DL-PARNDA--------- 659 (741)
T ss_dssp TCSEEEEESCCCCGG----------GSBHHH-------------HH---------HHH----CC-TGGGHH---------
T ss_pred ceEEEEEcCCCcchh----------hhcccc-------------ch---------hhc----CC-cccChh---------
Confidence 999999988642110 000000 00 000 00 000000
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhcc----CCCCccEEEcCCCCCCCCCCChh
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
.+.. . .....+.++++|+|+++|++|..+|.+..+.+.+ .....++.+++++||..+.+.++
T Consensus 660 -------~~~~---~----~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 725 (741)
T 2ecf_A 660 -------GYRE---A----RVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADAL 725 (741)
T ss_dssp -------HHHH---H----CSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHH
T ss_pred -------hhhh---c----CHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchh
Confidence 1100 0 0123356788999999999999999876654433 22235899999999999988889
Q ss_pred hHHHHHHHHHHhcC
Q 024900 233 LVNPLVESFVTRHA 246 (261)
Q Consensus 233 ~~~~~l~~fl~~~~ 246 (261)
++.+.+.+|++++.
T Consensus 726 ~~~~~i~~fl~~~l 739 (741)
T 2ecf_A 726 HRYRVAEAFLGRCL 739 (741)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-15 Score=141.00 Aligned_cols=215 Identities=12% Similarity=0.016 Sum_probs=119.4
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--------------------CCeEEEEcCh
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--------------------DQAFFICNSI 62 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--------------------~~~~lvGhS~ 62 (261)
++++|.|+++|.||+|.|+... ..+.. ..++|+.++++.+.. +++.++||||
T Consensus 278 a~~GYaVv~~D~RG~G~S~G~~-------~~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~Sy 349 (763)
T 1lns_A 278 LTRGFASIYVAGVGTRSSDGFQ-------TSGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSY 349 (763)
T ss_dssp HTTTCEEEEECCTTSTTSCSCC-------CTTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETH
T ss_pred HHCCCEEEEECCCcCCCCCCcC-------CCCCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECH
Confidence 4678999999999999997532 12343 457888888888762 3799999999
Q ss_pred hHHHHHHHHhhCcccccceEEeecchhhhh-hccCC---CC-Cch--hhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHH
Q 024900 63 GGLVGLQAAVMEPEICRGMILLNISLRMLH-IKKQP---WY-GRP--LIRSFQNLLRNTAAGKLFYKMVATSESVRNILC 135 (261)
Q Consensus 63 Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~-~~~~~---~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (261)
||.+++.+|+.+|+.++++|..++...... ..... .. +.. ....+.... +............ .
T Consensus 350 GG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~---------~~~~~~~g~~~~~-~ 419 (763)
T 1lns_A 350 LGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALT---------YSRNLDGADFLKG-N 419 (763)
T ss_dssp HHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHH---------CGGGGSHHHHHHH-H
T ss_pred HHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHH---------HhhhcCcchhhhH-H
Confidence 999999999999999999999876532111 00000 00 000 000000000 0000000000000 0
Q ss_pred hhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh-ccCCC-C
Q 024900 136 QCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDS-V 213 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~~~-~ 213 (261)
..+.. ..+.+.... ...... . ..+ .. . ......+.+|++|||+|+|.+|..+|+..+..+ ..+.. .
T Consensus 420 ~~~~~---~~~~~~~~~-~~~~~~-~-~~~---w~--~-~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~ 487 (763)
T 1lns_A 420 AEYEK---RLAEMTAAL-DRKSGD-Y-NQF---WH--D-RNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGH 487 (763)
T ss_dssp HHHHH---HHHHHHHHH-CTTTCC-C-CHH---HH--T-TBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTC
T ss_pred HHHHH---HHHHHHhhh-hhccCc-h-hHH---hh--c-cChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCC
Confidence 00000 000000000 000000 0 011 00 0 011245778999999999999999987765443 33321 1
Q ss_pred ccEEEcCCCCCCCCCC-ChhhHHHHHHHHHHhcCC
Q 024900 214 EDFIVLPNVGHCPQDE-APHLVNPLVESFVTRHAT 247 (261)
Q Consensus 214 ~~~~~i~~~gH~~~~e-~p~~~~~~l~~fl~~~~~ 247 (261)
....++.++||..+.+ .++.+.+.+..|+.+++.
T Consensus 488 ~~~l~i~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lk 522 (763)
T 1lns_A 488 AKHAFLHRGAHIYMNSWQSIDFSETINAYFVAKLL 522 (763)
T ss_dssp CEEEEEESCSSCCCTTBSSCCHHHHHHHHHHHHHT
T ss_pred CeEEEEeCCcccCccccchHHHHHHHHHHHHHHhc
Confidence 2334567889997655 667788888888877654
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.67 E-value=3.4e-16 Score=132.00 Aligned_cols=198 Identities=10% Similarity=-0.009 Sum_probs=109.5
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCccc----cc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEI----CR 79 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~----v~ 79 (261)
+|+|+++|+||+|.|..+. ...+....++.+.+.++.++. ++++|+|||+||.+++.+|..+|++ ++
T Consensus 110 G~~Vv~~d~rg~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 182 (323)
T 1lzl_A 110 GFAVANVEYRLAPETTFPG-------PVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVA 182 (323)
T ss_dssp CCEEEEECCCCTTTSCTTH-------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCC
T ss_pred CcEEEEecCCCCCCCCCCc-------hHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCee
Confidence 7999999999999986542 112334444444444445555 5899999999999999999998874 99
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|++++...... ....+....... ...................... .. ..
T Consensus 183 ~~vl~~p~~~~~~----------~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-------~~---~~ 233 (323)
T 1lzl_A 183 FQFLEIPELDDRL----------ETVSMTNFVDTP---------LWHRPNAILSWKYYLGESYSGP-------ED---PD 233 (323)
T ss_dssp EEEEESCCCCTTC----------CSHHHHHCSSCS---------SCCHHHHHHHHHHHHCTTCCCT-------TC---SC
T ss_pred EEEEECCccCCCc----------CchhHHHhccCC---------CCCHHHHHHHHHHhCCCCcccc-------cc---cC
Confidence 9999887532110 000110000000 0000001111100000000000 00 00
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCc--hhhhhhccCCCCccEEEcCCCCCCCC----CCChhh
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPI--ELGRAYGNFDSVEDFIVLPNVGHCPQ----DEAPHL 233 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~----~e~p~~ 233 (261)
...+ . .......+.. .+|++|++|++|.+++. ...+.+.+.....++++++++||... .+.+++
T Consensus 234 --~~~~---~----sp~~~~~~~~-~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~ 303 (323)
T 1lzl_A 234 --VSIY---A----APSRATDLTG-LPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSER 303 (323)
T ss_dssp --CCTT---T----CGGGCSCCTT-CCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHH
T ss_pred --CCcc---c----CcccCcccCC-CChhheEECCcCCchHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHH
Confidence 0000 0 0000011222 27999999999998741 12334444445579999999999643 344778
Q ss_pred HHHHHHHHHHhcCCCC
Q 024900 234 VNPLVESFVTRHATPP 249 (261)
Q Consensus 234 ~~~~l~~fl~~~~~~~ 249 (261)
+.+.+.+||++.....
T Consensus 304 ~~~~i~~fl~~~l~~~ 319 (323)
T 1lzl_A 304 GAAEALTAIRRGLRSL 319 (323)
T ss_dssp HHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999998876543
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.8e-16 Score=127.85 Aligned_cols=169 Identities=15% Similarity=0.119 Sum_probs=112.0
Q ss_pred CeEEEecCCCCCCCCC---C---CCCC-----CCC-CCCC-CHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHH
Q 024900 7 HRVYSIDLIGYGYSDK---P---NPRD-----FFD-KPFY-TFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQ 69 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~---~---~~~~-----~~~-~~~~-~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~ 69 (261)
++|+++|++++|++.. . ...+ +.+ ...| +++.+++++.++++.+ +.+++++|||||||.+++.
T Consensus 35 ~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~ 114 (250)
T 3lp5_A 35 HSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTL 114 (250)
T ss_dssp CCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHH
T ss_pred ceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHH
Confidence 7899999998887421 0 0000 000 0123 6788899999998888 7789999999999999999
Q ss_pred HHhhC-----cccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCC
Q 024900 70 AAVME-----PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV 144 (261)
Q Consensus 70 ~a~~~-----p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (261)
++..+ |++|+++|+++++...... .+ . ...
T Consensus 115 ~~~~~~~~~~~~~v~~lv~l~~p~~g~~~--~~--------------~-----------~~~------------------ 149 (250)
T 3lp5_A 115 FLERYLKESPKVHIDRLMTIASPYNMEST--ST--------------T-----------AKT------------------ 149 (250)
T ss_dssp HHHHTGGGSTTCEEEEEEEESCCTTTTCC--CS--------------S-----------CCC------------------
T ss_pred HHHHccccccchhhCEEEEECCCCCcccc--cc--------------c-----------ccC------------------
Confidence 99987 6789999999976432100 00 0 000
Q ss_pred cHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecC----CCCCCCchhhhhhccCCCC--c--cE
Q 024900 145 TEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGD----KDPWEPIELGRAYGNFDSV--E--DF 216 (261)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~----~D~~~~~~~~~~~~~~~~~--~--~~ 216 (261)
. .++.+ ... ...++. ++||++|+|+ .|..+|.+.++.++.+.+. . +.
T Consensus 150 -~-~~~~l----------------~~~------~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~ 204 (250)
T 3lp5_A 150 -S-MFKEL----------------YRY------RTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTE 204 (250)
T ss_dssp -H-HHHHH----------------HHT------GGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEE
T ss_pred -H-HHHHH----------------Hhc------cccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEE
Confidence 0 00000 000 122343 7999999999 8999999887665443221 1 22
Q ss_pred EEc--CCCCCCCCCCChhhHHHHHHHHHHhcC
Q 024900 217 IVL--PNVGHCPQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 217 ~~i--~~~gH~~~~e~p~~~~~~l~~fl~~~~ 246 (261)
..+ ++++|..+.++| +|++.|.+||.+..
T Consensus 205 ~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~~~ 235 (250)
T 3lp5_A 205 ITVTGANTAHSDLPQNK-QIVSLIRQYLLAET 235 (250)
T ss_dssp EECTTTTBSSCCHHHHH-HHHHHHHHHTSCCC
T ss_pred EEEeCCCCchhcchhCH-HHHHHHHHHHhccc
Confidence 233 467899999999 79999999997643
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-16 Score=128.80 Aligned_cols=175 Identities=9% Similarity=0.040 Sum_probs=107.1
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhC---cccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVME---PEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~---p~~v 78 (261)
|+.+|+|+++|+||++. +++++.++++.+. .++++|+||||||.||+++|..+ +++|
T Consensus 45 l~~~~~v~~~d~~g~~~-------------------~~~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v 105 (244)
T 2cb9_A 45 LNHKAAVYGFHFIEEDS-------------------RIEQYVSRITEIQPEGPYVLLGYSAGGNLAFEVVQAMEQKGLEV 105 (244)
T ss_dssp TTTTSEEEEECCCCSTT-------------------HHHHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCCE
T ss_pred hCCCceEEEEcCCCHHH-------------------HHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCc
Confidence 67789999999999731 2456666677775 57899999999999999999876 5789
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
.++|++++..... .+........ ...+..+ .....+..
T Consensus 106 ~~lvl~~~~~~~~-----~~~~~~~~~~--------------~~~~~~~-------------------~~~~~~~~---- 143 (244)
T 2cb9_A 106 SDFIIVDAYKKDQ-----SITADTENDD--------------SAAYLPE-------------------AVRETVMQ---- 143 (244)
T ss_dssp EEEEEESCCCCCS-----CCCCC---------------------CCSCH-------------------HHHHHHTH----
T ss_pred cEEEEEcCCCCcc-----cccccccHHH--------------HHHHhHH-------------------HHHHHHHH----
Confidence 9999999753210 0100000000 0000000 00000000
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecC--CCCCCCchhhhhhccC-CCCccEEEcCCCCC--CCCCCChhh
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGD--KDPWEPIELGRAYGNF-DSVEDFIVLPNVGH--CPQDEAPHL 233 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~--~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH--~~~~e~p~~ 233 (261)
....+..+.. . ...+..+++|+++|+|+ +|.. +++....+.+. .++.++..+++ || +.+.++|++
T Consensus 144 --~~~~~~~~~~-~-----~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~ 213 (244)
T 2cb9_A 144 --KKRCYQEYWA-Q-----LINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEK 213 (244)
T ss_dssp --HHHHHHHHHH-H-----CCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBSSCEEEEECSS-BGGGTTSHHHHHH
T ss_pred --HHHHHHHHHH-h-----hccCCCcCCCEEEEEccCccccc-cccchhHHHHhcCCCCEEEEecC-ChHHHcChHHHHH
Confidence 0001111111 0 12356789999999999 8874 33333334443 34578999986 99 787889999
Q ss_pred HHHHHHHHHHhcCCC
Q 024900 234 VNPLVESFVTRHATP 248 (261)
Q Consensus 234 ~~~~l~~fl~~~~~~ 248 (261)
+++.|.+||.+....
T Consensus 214 ~~~~i~~~L~~~~~~ 228 (244)
T 2cb9_A 214 NANIILNILDKINSD 228 (244)
T ss_dssp HHHHHHHHHHTC---
T ss_pred HHHHHHHHHhcCccC
Confidence 999999999875543
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=8.1e-17 Score=135.30 Aligned_cols=189 Identities=14% Similarity=0.164 Sum_probs=113.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhCccc----c
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEI----C 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~----v 78 (261)
.+|.|+++|+||+|.|..+. ...+..+.++++.+.++.++++ ++.|+|||+||.+++.+|..+|++ +
T Consensus 109 ~g~~Vv~~dyrg~g~~~~p~-------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~ 181 (311)
T 1jji_A 109 SNSTVVSVDYRLAPEHKFPA-------AVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFI 181 (311)
T ss_dssp HTSEEEEEECCCTTTSCTTH-------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCE
T ss_pred hCCEEEEecCCCCCCCCCCC-------cHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCc
Confidence 47999999999999997542 1235566666777767777765 899999999999999999998887 9
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|++++..... . . ...+..... .. + .........+......... + ...+
T Consensus 182 ~~~vl~~p~~~~~-------~--~-~~~~~~~~~-~~-----~--~~~~~~~~~~~~~~~~~~~----~----~~~~--- 232 (311)
T 1jji_A 182 KHQILIYPVVNFV-------A--P-TPSLLEFGE-GL-----W--ILDQKIMSWFSEQYFSREE----D----KFNP--- 232 (311)
T ss_dssp EEEEEESCCCCSS-------S--C-CHHHHHTSS-SC-----S--SCCHHHHHHHHHHHCSSGG----G----GGCT---
T ss_pred eEEEEeCCccCCC-------C--C-CccHHHhcC-CC-----c--cCCHHHHHHHHHHhCCCCc----c----CCCc---
Confidence 9999998753211 0 0 011110000 00 0 0011111111111110000 0 0000
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch--hhhhhccCCCCccEEEcCCCCCCCCC-----CCh
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQD-----EAP 231 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~~-----e~p 231 (261)
. .... ...+..+ .|+++++|++|.+++.. ..+.+.+.....++++++++||..+. +..
T Consensus 233 ------~-------~~p~-~~~l~~~-~P~li~~G~~D~l~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~ 297 (311)
T 1jji_A 233 ------L-------ASVI-FADLENL-PPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAA 297 (311)
T ss_dssp ------T-------TSGG-GSCCTTC-CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHH
T ss_pred ------c-------cCcc-cccccCC-ChheEEEcCcCcchHHHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHH
Confidence 0 0000 1123444 59999999999987533 23445555556899999999998764 344
Q ss_pred hhHHHHHHHHHHh
Q 024900 232 HLVNPLVESFVTR 244 (261)
Q Consensus 232 ~~~~~~l~~fl~~ 244 (261)
+++.+.+.+||++
T Consensus 298 ~~~~~~i~~fl~~ 310 (311)
T 1jji_A 298 RDAINQIAALLVF 310 (311)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh
Confidence 7888888899875
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.65 E-value=8.8e-16 Score=129.80 Aligned_cols=186 Identities=15% Similarity=0.024 Sum_probs=106.8
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---h-cCCCeEEEEcChhHHHHHHHHhhCcccc---
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---V-VKDQAFFICNSIGGLVGLQAAVMEPEIC--- 78 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~---l-~~~~~~lvGhS~Gg~va~~~a~~~p~~v--- 78 (261)
+|+|+++|+||+|.+..+. .+++..+.+..+.+. + +.++++|+|||+||.+++.+|..+|+++
T Consensus 121 g~~Vv~~Dyrg~~~~~~p~----------~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~ 190 (323)
T 3ain_A 121 QCVTISVDYRLAPENKFPA----------AVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKL 190 (323)
T ss_dssp TSEEEEECCCCTTTSCTTH----------HHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEecCCCCCCCCCcc----------hHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCc
Confidence 8999999999999986431 233433333333332 3 4678999999999999999999999887
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|++++..... . . ...+....... ..+...+..+.........
T Consensus 191 ~~~vl~~p~~~~~-------~-~--~~~~~~~~~~~---------~l~~~~~~~~~~~~~~~~~---------------- 235 (323)
T 3ain_A 191 KYQVLIYPAVSFD-------L-I--TKSLYDNGEGF---------FLTREHIDWFGQQYLRSFA---------------- 235 (323)
T ss_dssp SEEEEESCCCSCC-------S-C--CHHHHHHSSSS---------SSCHHHHHHHHHHHCSSGG----------------
T ss_pred eeEEEEeccccCC-------C-C--CccHHHhccCC---------CCCHHHHHHHHHHhCCCCc----------------
Confidence 8888888653210 0 0 01111000000 0011111111111000000
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCc--hhhhhhccCCCCccEEEcCCCCCCCCC-----CCh
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPI--ELGRAYGNFDSVEDFIVLPNVGHCPQD-----EAP 231 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~-----e~p 231 (261)
...+.. .... ...+..+ .|+||++|++|.+++. ...+.+.+.....++++++++||..+. +.+
T Consensus 236 -~~~~~~-------~sp~-~~~l~~l-~P~lii~G~~D~l~~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~ 305 (323)
T 3ain_A 236 -DLLDFR-------FSPI-LADLNDL-PPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQG 305 (323)
T ss_dssp -GGGCTT-------TCGG-GSCCTTC-CCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHH
T ss_pred -ccCCcc-------cCcc-cCcccCC-CHHHEEECCCCccHHHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHH
Confidence 000000 0000 0123444 3999999999998742 123334444445789999999999765 456
Q ss_pred hhHHHHHHHHHHhcC
Q 024900 232 HLVNPLVESFVTRHA 246 (261)
Q Consensus 232 ~~~~~~l~~fl~~~~ 246 (261)
+++.+.+.+||++..
T Consensus 306 ~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 306 RDAIGLIGYVLRKVF 320 (323)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 889999999998653
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=4.5e-16 Score=122.91 Aligned_cols=146 Identities=17% Similarity=0.084 Sum_probs=99.0
Q ss_pred cCCCCeEEEec-------------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhcC--CCeEEEEcChh
Q 024900 3 LAKSHRVYSID-------------LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK----DVVK--DQAFFICNSIG 63 (261)
Q Consensus 3 L~~~~~V~~~D-------------l~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~----~l~~--~~~~lvGhS~G 63 (261)
|+.+|+|+++| ++|||.+..... ...++...++++.++++ ..++ +++.|+|||||
T Consensus 39 l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~G 112 (209)
T 3og9_A 39 IAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENF------DLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNG 112 (209)
T ss_dssp HSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGB------CHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHH
T ss_pred cCCCceEEEecCCcCCCCcccceecccccccccCCC------CHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHH
Confidence 56789999999 888887653211 11234445555555554 3455 78999999999
Q ss_pred HHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCC
Q 024900 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ 143 (261)
Q Consensus 64 g~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (261)
|.+++.+|+.+|++++++|++++.... ..
T Consensus 113 g~~a~~~a~~~~~~~~~~v~~~~~~~~------------------------------------------------~~--- 141 (209)
T 3og9_A 113 ANVALNMFLRGKINFDKIIAFHGMQLE------------------------------------------------DF--- 141 (209)
T ss_dssp HHHHHHHHHTTSCCCSEEEEESCCCCC------------------------------------------------CC---
T ss_pred HHHHHHHHHhCCcccceEEEECCCCCC------------------------------------------------cc---
Confidence 999999999999999999998863100 00
Q ss_pred CcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhc----cCCCCccEEEc
Q 024900 144 VTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG----NFDSVEDFIVL 219 (261)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~i 219 (261)
......+++|+++++|++|.++|.+.++.+. +.....++.++
T Consensus 142 ----------------------------------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 187 (209)
T 3og9_A 142 ----------------------------------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYES 187 (209)
T ss_dssp ----------------------------------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ----------------------------------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEc
Confidence 0001235789999999999999987654433 33223577777
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 220 PNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 220 ~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
+ +||.... +..+.+.+||++
T Consensus 188 ~-~gH~~~~----~~~~~~~~~l~~ 207 (209)
T 3og9_A 188 S-LGHQLTQ----EEVLAAKKWLTE 207 (209)
T ss_dssp S-STTSCCH----HHHHHHHHHHHH
T ss_pred C-CCCcCCH----HHHHHHHHHHHh
Confidence 7 7998643 234556667765
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-15 Score=122.82 Aligned_cols=129 Identities=15% Similarity=0.192 Sum_probs=91.4
Q ss_pred CCHHHHHHHHHHHHHHh-----cCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHH
Q 024900 34 YTFETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQ 108 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (261)
++++++++++..+++.+ +.++++|+||||||.+++.+|..+|++++++|++++..... ...
T Consensus 94 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~---------~~~----- 159 (239)
T 3u0v_A 94 ESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKA---------SAV----- 159 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTT---------CHH-----
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCch---------hHH-----
Confidence 46788888888888773 45789999999999999999999999999999998642110 000
Q ss_pred HHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCC-
Q 024900 109 NLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCP- 187 (261)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P- 187 (261)
+. .+ . ....++|
T Consensus 160 ------------~~-------------------------~~--------------------~----------~~~~~~pp 172 (239)
T 3u0v_A 160 ------------YQ-------------------------AL--------------------Q----------KSNGVLPE 172 (239)
T ss_dssp ------------HH-------------------------HH--------------------H----------HCCSCCCC
T ss_pred ------------HH-------------------------HH--------------------H----------hhccCCCC
Confidence 00 00 0 0113456
Q ss_pred EEEEecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcCC
Q 024900 188 VLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 188 vlii~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~~ 247 (261)
+++++|++|.++|.+.++. +.+...+.++.+++++||.... +..+.+.+|+++...
T Consensus 173 ~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~----~~~~~~~~~l~~~l~ 232 (239)
T 3u0v_A 173 LFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSK----TELDILKLWILTKLP 232 (239)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCH----HHHHHHHHHHHHHCC
T ss_pred EEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCH----HHHHHHHHHHHHhCC
Confidence 9999999999999865544 3333345789999999999873 334555567776554
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.8e-15 Score=122.39 Aligned_cols=156 Identities=18% Similarity=0.052 Sum_probs=103.7
Q ss_pred CCCHHHHHHHH----HHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc-----cccceEEeecchhhhhhccCCCCCchh
Q 024900 33 FYTFETWASQL----NDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-----ICRGMILLNISLRMLHIKKQPWYGRPL 103 (261)
Q Consensus 33 ~~~~~~~a~dl----~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lv~~~~~~~~~~~~~~~~~~~~~ 103 (261)
.+++..+++++ ..+.+.++.+++++|||||||.+++.++.++|+ +|+++|+++++.... ..
T Consensus 70 ~~~~~~~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~----------~~ 139 (254)
T 3ds8_A 70 QATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDL----------DP 139 (254)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCS----------CH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcc----------cc
Confidence 46899999999 445556677899999999999999999999998 899999999864321 00
Q ss_pred hHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCC
Q 024900 104 IRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQ 183 (261)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 183 (261)
. .. .. .+. +...+... ..+.++... ...+..
T Consensus 140 ~---~~-~~----------~~~------------~~~~p~~~-----------------~~~~~~~~~------~~~~~~ 170 (254)
T 3ds8_A 140 N---DN-GM----------DLS------------FKKLPNST-----------------PQMDYFIKN------QTEVSP 170 (254)
T ss_dssp H---HH-CS----------CTT------------CSSCSSCC-----------------HHHHHHHHT------GGGSCT
T ss_pred c---cc-cc----------ccc------------cccCCcch-----------------HHHHHHHHH------HhhCCC
Confidence 0 00 00 000 00000000 011111110 122333
Q ss_pred CCCCEEEEecC------CCCCCCchhhhhhccCCCC----ccEEEcCC--CCCCCCCCChhhHHHHHHHHHHhcCCCC
Q 024900 184 VKCPVLIAWGD------KDPWEPIELGRAYGNFDSV----EDFIVLPN--VGHCPQDEAPHLVNPLVESFVTRHATPP 249 (261)
Q Consensus 184 i~~Pvlii~G~------~D~~~~~~~~~~~~~~~~~----~~~~~i~~--~gH~~~~e~p~~~~~~l~~fl~~~~~~~ 249 (261)
++|++.|+|+ .|..+|.+.++.++...++ .+...+.+ ++|..+.++|+ +.+.+..||++..+..
T Consensus 171 -~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~~~~~~ 246 (254)
T 3ds8_A 171 -DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEKFKTDE 246 (254)
T ss_dssp -TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHTCCCSS
T ss_pred -CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHHhcCCC
Confidence 7999999999 9999999988877665442 23345554 78999999996 8889999999876554
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=6.6e-16 Score=143.36 Aligned_cols=181 Identities=7% Similarity=-0.017 Sum_probs=113.5
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
+.+|.|+++|+||+|.|........ ...+. ....+|+.+.++.+. .+++.++||||||.+++.+|..+|++
T Consensus 526 ~~G~~v~~~d~rG~g~~~~~~~~~~--~~~~~-~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~ 602 (719)
T 1z68_A 526 KEGMVIALVDGRGTAFQGDKLLYAV--YRKLG-VYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGL 602 (719)
T ss_dssp TTCCEEEEEECTTBSSSCHHHHGGG--TTCTT-HHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSC
T ss_pred cCCeEEEEEcCCCCCCCchhhHHHH--hhccC-cccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCc
Confidence 4789999999999999864210000 00011 123445554444432 35799999999999999999999999
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
++++|++++.... . .+...+. . ..+ +... . .+
T Consensus 603 ~~~~v~~~~~~~~--------~--~~~~~~~---------~-------------~~~----g~~~-~-~~---------- 634 (719)
T 1z68_A 603 FKCGIAVAPVSSW--------E--YYASVYT---------E-------------RFM----GLPT-K-DD---------- 634 (719)
T ss_dssp CSEEEEESCCCCT--------T--TSBHHHH---------H-------------HHH----CCSS-T-TT----------
T ss_pred eEEEEEcCCccCh--------H--Hhccccc---------h-------------hhc----CCcc-c-cc----------
Confidence 9999999864311 0 0000000 0 000 0000 0 00
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCC-CEEEEecCCCCCCCchhhhhhcc----CCCCccEEEcCCCCCCCCCCChh
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKC-PVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQDEAPH 232 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~i~~~gH~~~~e~p~ 232 (261)
....+. .. .....+.++++ |+|+++|++|..+|.+.++.+.+ .....++.+++++||....++++
T Consensus 635 ---~~~~~~---~~----~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~ 704 (719)
T 1z68_A 635 ---NLEHYK---NS----TVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTN 704 (719)
T ss_dssp ---THHHHH---HT----CSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHH
T ss_pred ---chhhhh---hC----CHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHH
Confidence 000010 00 01133556777 89999999999999876554432 22335799999999999778899
Q ss_pred hHHHHHHHHHHhc
Q 024900 233 LVNPLVESFVTRH 245 (261)
Q Consensus 233 ~~~~~l~~fl~~~ 245 (261)
++.+.+.+|++++
T Consensus 705 ~~~~~i~~fl~~~ 717 (719)
T 1z68_A 705 HLYTHMTHFLKQC 717 (719)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.4e-15 Score=138.29 Aligned_cols=191 Identities=15% Similarity=0.105 Sum_probs=119.1
Q ss_pred CCCCeEEEecCCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--hcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 4 AKSHRVYSIDLIG---YGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 4 ~~~~~V~~~Dl~G---~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
+.+|.|+++|+|| ||+|...... .....++++++++.+..++++ +..+++.|+||||||.+++.++.. |+++
T Consensus 451 ~~G~~v~~~d~rG~~~~G~~~~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~ 527 (662)
T 3azo_A 451 SRGIGVADVNYGGSTGYGRAYRERLR--GRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVY 527 (662)
T ss_dssp TTTCEEEEEECTTCSSSCHHHHHTTT--TTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCC
T ss_pred hCCCEEEEECCCCCCCccHHHHHhhc--cccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCce
Confidence 4679999999999 8877432110 001124567777777777766 445689999999999999998885 9999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|++++.......... ........+ . ...++... ...+
T Consensus 528 ~~~v~~~~~~~~~~~~~~---------------~~~~~~~~~---------~----~~~~~~~~-~~~~----------- 567 (662)
T 3azo_A 528 ACGTVLYPVLDLLGWADG---------------GTHDFESRY---------L----DFLIGSFE-EFPE----------- 567 (662)
T ss_dssp SEEEEESCCCCHHHHHTT---------------CSCGGGTTH---------H----HHHTCCTT-TCHH-----------
T ss_pred EEEEecCCccCHHHHhcc---------------cccchhhHh---------H----HHHhCCCc-cchh-----------
Confidence 999988764221100000 000000000 0 00011100 0011
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC----CCccEEEcCCCCCCC-CCCChhh
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----SVEDFIVLPNVGHCP-QDEAPHL 233 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~ 233 (261)
.+.. . .....+.++++|+|+++|++|..+|++.++.+.+.. ...++++++++||.. ..+++++
T Consensus 568 -----~~~~---~----sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~ 635 (662)
T 3azo_A 568 -----RYRD---R----APLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVR 635 (662)
T ss_dssp -----HHHH---T----CGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHH
T ss_pred -----HHHh---h----ChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHH
Confidence 1110 0 112335678899999999999999988665543322 234889999999986 4567889
Q ss_pred HHHHHHHHHHhcCCCC
Q 024900 234 VNPLVESFVTRHATPP 249 (261)
Q Consensus 234 ~~~~l~~fl~~~~~~~ 249 (261)
+.+.+.+|+.++....
T Consensus 636 ~~~~~~~fl~~~l~~~ 651 (662)
T 3azo_A 636 ALEAELSLYAQVFGVE 651 (662)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999998876543
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-16 Score=124.62 Aligned_cols=152 Identities=15% Similarity=0.049 Sum_probs=101.8
Q ss_pred cCCCCeEEEecCCCCC---CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cC--CCeEEEEcChhHHHHHHHHhh
Q 024900 3 LAKSHRVYSIDLIGYG---YSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VK--DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G---~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~--~~~~lvGhS~Gg~va~~~a~~ 73 (261)
|+++|+|+++|.||+. .+.... .........++...++++.++++.+ ++ ++++|+||||||.+++.+|..
T Consensus 53 l~~~~~vv~~d~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 131 (223)
T 3b5e_A 53 IAPTATLVAARGRIPQEDGFRWFER-IDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLL 131 (223)
T ss_dssp HCTTSEEEEECCSEEETTEEESSCE-EETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHH
T ss_pred cCCCceEEEeCCCCCcCCccccccc-cCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHh
Confidence 5668999999988742 221100 0000001124556667777766655 33 689999999999999999999
Q ss_pred CcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 024900 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (261)
Q Consensus 74 ~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
+|++++++|++++.... . ..
T Consensus 132 ~~~~~~~~v~~~~~~~~-----------~-------------------------------------~~------------ 151 (223)
T 3b5e_A 132 HPGIVRLAALLRPMPVL-----------D-------------------------------------HV------------ 151 (223)
T ss_dssp STTSCSEEEEESCCCCC-----------S-------------------------------------SC------------
T ss_pred CccccceEEEecCccCc-----------c-------------------------------------cc------------
Confidence 99999999998863110 0 00
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC----CCccEEEcCCCCCCCCCC
Q 024900 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----SVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e 229 (261)
.....+++|+++++|++|.++|.+.++ +.+.. .+.++++++ +||....+
T Consensus 152 -------------------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~ 204 (223)
T 3b5e_A 152 -------------------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDP 204 (223)
T ss_dssp -------------------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHH
T ss_pred -------------------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHH
Confidence 001235789999999999999988766 54322 247899999 99998644
Q ss_pred ChhhHHHHHHHHHHhcC
Q 024900 230 APHLVNPLVESFVTRHA 246 (261)
Q Consensus 230 ~p~~~~~~l~~fl~~~~ 246 (261)
.+ +.+.+|+++..
T Consensus 205 ~~----~~i~~~l~~~~ 217 (223)
T 3b5e_A 205 DA----AIVRQWLAGPI 217 (223)
T ss_dssp HH----HHHHHHHHCC-
T ss_pred HH----HHHHHHHHhhh
Confidence 33 46777887643
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.63 E-value=8.1e-16 Score=142.61 Aligned_cols=182 Identities=9% Similarity=0.007 Sum_probs=112.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHH--hcCCCeEEEEcChhHHHHHHHHhhC----ccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPR-DFFDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVME----PEI 77 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~-~~~~~~~~~~~~~a~dl~~~~~~--l~~~~~~lvGhS~Gg~va~~~a~~~----p~~ 77 (261)
.+|.|+++|+||+|.+...... .......+.++++++.+..+.+. +..+++.|+||||||.+++.+|..+ |++
T Consensus 527 ~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~ 606 (723)
T 1xfd_A 527 HGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQT 606 (723)
T ss_dssp TCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCC
T ss_pred CCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCe
Confidence 6899999999999985211000 00000112344444443332221 1235799999999999999999999 999
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
++++|++++.... . .+...+. ...+ ..... ..+ . .
T Consensus 607 ~~~~v~~~~~~~~--------~--~~~~~~~----------------------~~~~----~~~~~-~~~----~----~ 641 (723)
T 1xfd_A 607 FTCGSALSPITDF--------K--LYASAFS----------------------ERYL----GLHGL-DNR----A----Y 641 (723)
T ss_dssp CSEEEEESCCCCT--------T--SSBHHHH----------------------HHHH----CCCSS-CCS----S----T
T ss_pred EEEEEEccCCcch--------H--Hhhhhcc----------------------Hhhc----CCccC-Chh----H----H
Confidence 9999998864211 0 0000000 0000 00000 000 0 0
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCC-CCEEEEecCCCCCCCchhhhhhc----cCCCCccEEEcCCCCCCC-CCCCh
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVK-CPVLIAWGDKDPWEPIELGRAYG----NFDSVEDFIVLPNVGHCP-QDEAP 231 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~i~~~gH~~-~~e~p 231 (261)
. . ......+.+++ +|+|+|+|++|..+|++.++.+. +.....+++++|++||.. +.+++
T Consensus 642 ~--------------~-~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 706 (723)
T 1xfd_A 642 E--------------M-TKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLK 706 (723)
T ss_dssp T--------------T-TCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHH
T ss_pred H--------------h-cChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcch
Confidence 0 0 00012345678 89999999999999987655433 233457999999999998 67889
Q ss_pred hhHHHHHHHHHHhcC
Q 024900 232 HLVNPLVESFVTRHA 246 (261)
Q Consensus 232 ~~~~~~l~~fl~~~~ 246 (261)
+++.+.+.+||+++.
T Consensus 707 ~~~~~~i~~fl~~~l 721 (723)
T 1xfd_A 707 QHLYRSIINFFVECF 721 (723)
T ss_dssp HHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.9e-15 Score=127.33 Aligned_cols=74 Identities=12% Similarity=0.068 Sum_probs=60.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCc---ccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP---EICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~l 81 (261)
.+|+|+++|+||||.++.. .+.+++++.+..+++.++.++++||||||||.++..++..+| ++|+++
T Consensus 59 ~G~~v~~~d~~g~g~~~~~----------~~~~~l~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~l 128 (317)
T 1tca_A 59 LGYTPCWISPPPFMLNDTQ----------VNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRL 128 (317)
T ss_dssp TTCEEEEECCTTTTCSCHH----------HHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEE
T ss_pred CCCEEEEECCCCCCCCcHH----------HHHHHHHHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEE
Confidence 4799999999999987521 234566666667777777799999999999999999988876 889999
Q ss_pred EEeecch
Q 024900 82 ILLNISL 88 (261)
Q Consensus 82 v~~~~~~ 88 (261)
|+++++.
T Consensus 129 V~l~~~~ 135 (317)
T 1tca_A 129 MAFAPDY 135 (317)
T ss_dssp EEESCCT
T ss_pred EEECCCC
Confidence 9999753
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=5e-16 Score=133.26 Aligned_cols=203 Identities=12% Similarity=0.024 Sum_probs=110.1
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhh-----Cccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-----EPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~-----~p~~v~ 79 (261)
.+|.|+++|+||+|.|+...+ .. ....+....++.+.+.++.++.++++|+|||+||.+++.++.. +|++++
T Consensus 140 ~g~~vv~~d~r~~gg~~~~~~--~~-~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~ 216 (361)
T 1jkm_A 140 AGSVVVMVDFRNAWTAEGHHP--FP-SGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAID 216 (361)
T ss_dssp TTCEEEEEECCCSEETTEECC--TT-HHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCS
T ss_pred CCCEEEEEecCCCCCCCCCCC--CC-ccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcc
Confidence 789999999999976641100 00 0011223334444555556677799999999999999999998 888999
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|++++..... ..+ . ......... ... ..............+... +.......
T Consensus 217 ~~il~~~~~~~~----~~~--~--~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 270 (361)
T 1jkm_A 217 GVYASIPYISGG----YAW--D--HERRLTELP--SLV-ENDGYFIENGGMALLVRA---------------YDPTGEHA 270 (361)
T ss_dssp EEEEESCCCCCC----TTS--C--HHHHHHHCT--HHH-HTTTSSSCHHHHHHHHHH---------------HSSSSTTT
T ss_pred eEEEECCccccc----ccc--c--cccccccCc--chh-hccCcccCHHHHHHHHHH---------------hCCCCCCC
Confidence 999999753210 000 0 000000000 000 000000011111111100 00000000
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchh---hhhhccCCCCccEEEcCCCCCCCC-C-----CC
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL---GRAYGNFDSVEDFIVLPNVGHCPQ-D-----EA 230 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~---~~~~~~~~~~~~~~~i~~~gH~~~-~-----e~ 230 (261)
...+. .........+..+. |+||++|++|.+++ +. .+.+.+.....++++++++||..+ . ++
T Consensus 271 --~~~~~-----~p~~~~~~~l~~l~-P~Lii~G~~D~~~~-~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~ 341 (361)
T 1jkm_A 271 --EDPIA-----WPYFASEDELRGLP-PFVVAVNELDPLRD-EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPA 341 (361)
T ss_dssp --TCTTT-----CGGGCCHHHHTTCC-CEEEEEETTCTTHH-HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHH
T ss_pred --CCccc-----CccccChhhHcCCC-ceEEEEcCcCcchh-hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccH
Confidence 00000 00000012345666 99999999999887 32 223333344569999999999977 3 44
Q ss_pred h-hhHHHHHHHHHHhc
Q 024900 231 P-HLVNPLVESFVTRH 245 (261)
Q Consensus 231 p-~~~~~~l~~fl~~~ 245 (261)
+ +++.+.+.+||+++
T Consensus 342 ~~~~~~~~i~~fl~~~ 357 (361)
T 1jkm_A 342 ALESTVRDVAGFAADR 357 (361)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4 88899999999764
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-14 Score=122.52 Aligned_cols=190 Identities=15% Similarity=0.143 Sum_probs=108.7
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hcCCCeEEEEcChhHHHHHHHHhhCccc----ccc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VVKDQAFFICNSIGGLVGLQAAVMEPEI----CRG 80 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~-l~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~~ 80 (261)
+|.|+++|+||++.+..+ ..+++..+.+..+.+. +..+++.|+|||+||.+++.+|+.+|+. +++
T Consensus 111 g~~v~~~dyr~~~~~~~~----------~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~ 180 (322)
T 3k6k_A 111 SATLWSLDYRLAPENPFP----------AAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAG 180 (322)
T ss_dssp TCEEEEECCCCTTTSCTT----------HHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSE
T ss_pred CCEEEEeeCCCCCCCCCc----------hHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceE
Confidence 899999999999877532 2355555555444444 3456899999999999999999998887 999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|++++..... . . ........... .......+..+.......... ..
T Consensus 181 ~vl~~p~~~~~---~-----~--~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~--------------~~- 227 (322)
T 3k6k_A 181 LVMLSPFVDLT---L-----S--RWSNSNLADRD--------FLAEPDTLGEMSELYVGGEDR--------------KN- 227 (322)
T ss_dssp EEEESCCCCTT---C-----C--SHHHHHTGGGC--------SSSCHHHHHHHHHHHHTTSCT--------------TC-
T ss_pred EEEecCCcCcc---c-----C--ccchhhccCCC--------CcCCHHHHHHHHHHhcCCCCC--------------CC-
Confidence 99998753221 0 0 00111000000 000111111111000000000 00
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch--hhhhhccCCCCccEEEcCCCCCCCC-----CCChhh
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQ-----DEAPHL 233 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~-----~e~p~~ 233 (261)
.. .... ...+ +..+|+||++|++|.++... ..+.+.+.....++++++++||..+ .+++++
T Consensus 228 ---~~-------~sp~-~~~~-~~~pP~li~~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~ 295 (322)
T 3k6k_A 228 ---PL-------ISPV-YADL-SGLPEMLIHVGSEEALLSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADI 295 (322)
T ss_dssp ---TT-------TCGG-GSCC-TTCCCEEEEEESSCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHH
T ss_pred ---Cc-------CCcc-cccc-cCCCcEEEEECCcCccHHHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHH
Confidence 00 0000 0112 22369999999999874321 1223444444579999999999855 355788
Q ss_pred HHHHHHHHHHhcCCCCC
Q 024900 234 VNPLVESFVTRHATPPA 250 (261)
Q Consensus 234 ~~~~l~~fl~~~~~~~~ 250 (261)
+.+.+.+||+++.....
T Consensus 296 ~~~~i~~fl~~~l~~~~ 312 (322)
T 3k6k_A 296 SIKEICHWISARISKLA 312 (322)
T ss_dssp HHHHHHHHHHTTCC---
T ss_pred HHHHHHHHHHHHHhccc
Confidence 99999999998766543
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.60 E-value=6.7e-16 Score=127.90 Aligned_cols=78 Identities=13% Similarity=0.057 Sum_probs=60.3
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-C-CCeEEEEcChhHHHHHHHHhhCccc-ccceE
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-K-DQAFFICNSIGGLVGLQAAVMEPEI-CRGMI 82 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~-~~~~lvGhS~Gg~va~~~a~~~p~~-v~~lv 82 (261)
+++|+++|+ |||.|+.+.. . ..+++.+.++++.+.++.+. . ++++||||||||.|+..+|.++|++ |+++|
T Consensus 37 g~~v~~~d~-G~g~s~~~~~-~----~~~~~~~~~~~~~~~l~~~~~l~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv 110 (279)
T 1ei9_A 37 GIHVLSLEI-GKTLREDVEN-S----FFLNVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLI 110 (279)
T ss_dssp TCCEEECCC-SSSHHHHHHH-H----HHSCHHHHHHHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEE
T ss_pred CcEEEEEEe-CCCCcccccc-c----cccCHHHHHHHHHHHHHhhhhccCCEEEEEECHHHHHHHHHHHHcCCcccceEE
Confidence 569999998 9998853210 0 11467777777777776532 2 7899999999999999999999995 99999
Q ss_pred Eeecchh
Q 024900 83 LLNISLR 89 (261)
Q Consensus 83 ~~~~~~~ 89 (261)
+++++..
T Consensus 111 ~~~~p~~ 117 (279)
T 1ei9_A 111 SVGGQHQ 117 (279)
T ss_dssp EESCCTT
T ss_pred EecCccC
Confidence 9987543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=139.98 Aligned_cols=182 Identities=11% Similarity=0.018 Sum_probs=113.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHh---c---CCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDV---V---KDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~a~dl~~~~~~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
.+|.|+++|+||+|.+....... ......+.+ +|+.+.++.+ + .+++.|+||||||.+++.+|+.+|++
T Consensus 533 ~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~----~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~ 608 (740)
T 4a5s_A 533 ENIIVASFDGRGSGYQGDKIMHAINRRLGTFEV----EDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGV 608 (740)
T ss_dssp TCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHH----HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSC
T ss_pred CCeEEEEEcCCCCCcCChhHHHHHHhhhCcccH----HHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCc
Confidence 78999999999999775321000 000011123 3444444433 2 26799999999999999999999999
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCC-CCCcHHHHHHHhccC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDT-SQVTEELVEKILQPG 156 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 156 (261)
++++|++++.... . .+...+. ..+ + +.. .....+.+
T Consensus 609 ~~~~v~~~p~~~~--------~--~~~~~~~---------~~~-------------~----~~p~~~~~~~~~------- 645 (740)
T 4a5s_A 609 FKCGIAVAPVSRW--------E--YYDSVYT---------ERY-------------M----GLPTPEDNLDHY------- 645 (740)
T ss_dssp CSEEEEESCCCCG--------G--GSBHHHH---------HHH-------------H----CCSSTTTTHHHH-------
T ss_pred eeEEEEcCCccch--------H--HhhhHHH---------HHH-------------c----CCCCccccHHHH-------
Confidence 9999988864211 0 0000000 000 0 000 00001111
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCC-CEEEEecCCCCCCCchhhhhhc----cCCCCccEEEcCCCCCCC-CCCC
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKC-PVLIAWGDKDPWEPIELGRAYG----NFDSVEDFIVLPNVGHCP-QDEA 230 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~i~~~gH~~-~~e~ 230 (261)
. .. .....+.++++ |+|+++|+.|..+|.+.+..+. +.....++.++|++||.. +.+.
T Consensus 646 ---------~---~~----~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 709 (740)
T 4a5s_A 646 ---------R---NS----TVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTA 709 (740)
T ss_dssp ---------H---HS----CSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHH
T ss_pred ---------H---hC----CHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCcc
Confidence 0 00 01123456776 9999999999999987654433 233346889999999998 6788
Q ss_pred hhhHHHHHHHHHHhcCCCC
Q 024900 231 PHLVNPLVESFVTRHATPP 249 (261)
Q Consensus 231 p~~~~~~l~~fl~~~~~~~ 249 (261)
++++.+.+.+||+++...+
T Consensus 710 ~~~~~~~i~~fl~~~l~~~ 728 (740)
T 4a5s_A 710 HQHIYTHMSHFIKQCFSLP 728 (740)
T ss_dssp HHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHcCCC
Confidence 9999999999999876543
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.59 E-value=3.9e-16 Score=130.76 Aligned_cols=191 Identities=14% Similarity=0.038 Sum_probs=103.0
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCeEEEEcChhHHHHHHHHhhCcc----ccc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE----ICR 79 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~----~v~ 79 (261)
+|+|+++|+||+|.+..+. ...+....++.+.+....++ .++++|+||||||.+++.+|..+|+ +++
T Consensus 105 g~~v~~~d~rg~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~ 177 (310)
T 2hm7_A 105 RAVVFSVDYRLAPEHKFPA-------AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALA 177 (310)
T ss_dssp TSEEEEECCCCTTTSCTTH-------HHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCEEEEeCCCCCCCCCCCc-------cHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCce
Confidence 6999999999999875431 00111111222222112222 3689999999999999999999887 699
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|++++..... .... ...+...... ..........+......... + ...+
T Consensus 178 ~~vl~~p~~~~~-----~~~~---~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~----~----~~~~---- 228 (310)
T 2hm7_A 178 FQLLIYPSTGYD-----PAHP---PASIEENAEG---------YLLTGGMMLWFRDQYLNSLE----E----LTHP---- 228 (310)
T ss_dssp CEEEESCCCCCC-----TTSC---CHHHHHTSSS---------SSSCHHHHHHHHHHHCSSGG----G----GGCT----
T ss_pred EEEEEcCCcCCC-----cccC---CcchhhcCCC---------CCCCHHHHHHHHHHhCCCCC----c----cCCc----
Confidence 999998753211 0000 0111100000 00011111111111000000 0 0000
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCc--hhhhhhccCCCCccEEEcCCCCCCCC-----CCChh
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPI--ELGRAYGNFDSVEDFIVLPNVGHCPQ-----DEAPH 232 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~-----~e~p~ 232 (261)
.........+..+ .|+|+++|++|.+++. ...+.+.+.....++++++++||..+ .++++
T Consensus 229 ------------~~~p~~~~~l~~~-~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~ 295 (310)
T 2hm7_A 229 ------------WFSPVLYPDLSGL-PPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGAT 295 (310)
T ss_dssp ------------TTCGGGCSCCTTC-CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHH
T ss_pred ------------cCCCCcCccccCC-CCEEEEEecCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHH
Confidence 0000001224444 3999999999998721 12233444444578999999999644 46678
Q ss_pred hHHHHHHHHHHhc
Q 024900 233 LVNPLVESFVTRH 245 (261)
Q Consensus 233 ~~~~~l~~fl~~~ 245 (261)
++.+.+.+||+++
T Consensus 296 ~~~~~i~~fl~~~ 308 (310)
T 2hm7_A 296 KALVRIAEKLRDA 308 (310)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.3e-15 Score=119.14 Aligned_cols=180 Identities=12% Similarity=0.052 Sum_probs=106.5
Q ss_pred CeEEEecCCCCCCCCCCC------CCC-----CCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHH
Q 024900 7 HRVYSIDLIGYGYSDKPN------PRD-----FFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAA 71 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~------~~~-----~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a 71 (261)
++|+++|++++|++.... ..+ +.+....++.++++++.++++.+ +.+++++|||||||.+++.++
T Consensus 36 ~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~ 115 (249)
T 3fle_A 36 NEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYM 115 (249)
T ss_dssp SCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHH
T ss_pred ceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHH
Confidence 479999999999863210 000 00001224555566666655544 778999999999999999999
Q ss_pred hhCcc-----cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcH
Q 024900 72 VMEPE-----ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTE 146 (261)
Q Consensus 72 ~~~p~-----~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (261)
..+|+ +|+++|+++++.........+ . .. ..+.. .+.....+
T Consensus 116 ~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~----~--------------~~---~~~~~-----------~g~p~~~~- 162 (249)
T 3fle_A 116 KNYGDDRHLPQLKKEVNIAGVYNGILNMNEN----V--------------NE---IIVDK-----------QGKPSRMN- 162 (249)
T ss_dssp HHHSSCSSSCEEEEEEEESCCTTCCTTTSSC----T--------------TT---SCBCT-----------TCCBSSCC-
T ss_pred HHCcccccccccceEEEeCCccCCcccccCC----c--------------ch---hhhcc-----------cCCCcccC-
Confidence 99874 799999999864321100000 0 00 00000 00000000
Q ss_pred HHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecC------CCCCCCchhhhhhccCCCC----ccE
Q 024900 147 ELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGD------KDPWEPIELGRAYGNFDSV----EDF 216 (261)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~------~D~~~~~~~~~~~~~~~~~----~~~ 216 (261)
..+.++.. .+..++..++|||.|.|+ .|..||...++.++.+.++ -+.
T Consensus 163 ----------------~~~~~l~~------~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e 220 (249)
T 3fle_A 163 ----------------AAYRQLLS------LYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQE 220 (249)
T ss_dssp ----------------HHHHHTGG------GHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEE
T ss_pred ----------------HHHHHHHH------HHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEE
Confidence 11111110 023355568999999998 5889999887654432221 244
Q ss_pred EEcCC--CCCCCCCCChhhHHHHHHHHH
Q 024900 217 IVLPN--VGHCPQDEAPHLVNPLVESFV 242 (261)
Q Consensus 217 ~~i~~--~gH~~~~e~p~~~~~~l~~fl 242 (261)
..+.| +.|....++| ++.+.|.+||
T Consensus 221 ~~v~g~~a~Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 221 MKFKGAKAQHSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp EEEESGGGSTGGGGGCH-HHHHHHHHHH
T ss_pred EEEeCCCCchhccccCH-HHHHHHHHHh
Confidence 55644 9999888888 5777888887
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-16 Score=133.37 Aligned_cols=175 Identities=13% Similarity=0.083 Sum_probs=108.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCc-------c
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP-------E 76 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p-------~ 76 (261)
+.+|.|+++|+||+|.+..+. ...+....++.+.+....++.++++|+||||||.+++.+++..+ +
T Consensus 110 ~~G~~v~~~d~r~~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~ 182 (303)
T 4e15_A 110 RRGYRVAVMDYNLCPQVTLEQ-------LMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSK 182 (303)
T ss_dssp HTTCEEEEECCCCTTTSCHHH-------HHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHH
T ss_pred hCCCEEEEecCCCCCCCChhH-------HHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccc
Confidence 468999999999998874321 00122222333333334556789999999999999999998653 4
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
+++++|++++...... + ..... .+.. ..+.. +++.+
T Consensus 183 ~v~~~v~~~~~~~~~~--------------~---~~~~~---~~~~-------------~~~~~----~~~~~------- 218 (303)
T 4e15_A 183 MVWALIFLCGVYDLRE--------------L---SNLES---VNPK-------------NILGL----NERNI------- 218 (303)
T ss_dssp TEEEEEEESCCCCCHH--------------H---HTCTT---TSGG-------------GTTCC----CTTTT-------
T ss_pred cccEEEEEeeeeccHh--------------h---hcccc---cchh-------------hhhcC----CHHHH-------
Confidence 8999999987432110 0 00000 0000 00000 00000
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCC----CCCCCEEEEecCCCCCCCchhhhhhccC----CCCccEEEcCCCCCCCCC
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLP----QVKCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~Pvlii~G~~D~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~~ 228 (261)
. .. ......+. .+++|+|+++|++|..++.+.++.+.+. ....++++++++||+..+
T Consensus 219 -~-----------~~---sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~ 283 (303)
T 4e15_A 219 -E-----------SV---SPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDII 283 (303)
T ss_dssp -T-----------TT---CGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHH
T ss_pred -H-----------Hc---CchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHH
Confidence 0 00 00001233 3489999999999998888766554432 234689999999999999
Q ss_pred CChhhHHHHHHHHHHh
Q 024900 229 EAPHLVNPLVESFVTR 244 (261)
Q Consensus 229 e~p~~~~~~l~~fl~~ 244 (261)
|++...+..+.+|+.+
T Consensus 284 ~~~~~~~~~l~~~l~~ 299 (303)
T 4e15_A 284 EETAIDDSDVSRFLRN 299 (303)
T ss_dssp HGGGSTTSHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHH
Confidence 9999999999888864
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-14 Score=119.46 Aligned_cols=203 Identities=12% Similarity=0.061 Sum_probs=109.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-----CCCeEEEEcChhHHHHHHHHh---hCcc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAAV---MEPE 76 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-----~~~~~lvGhS~Gg~va~~~a~---~~p~ 76 (261)
.+|+|+++|+|+.+.+ ++...++|+.+.++.+. .++++|+|+|+||.+|+.+|. .+|.
T Consensus 57 ~g~~Vi~vdYrlaPe~--------------~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~ 122 (274)
T 2qru_A 57 NGYTVLALDYLLAPNT--------------KIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNL 122 (274)
T ss_dssp TTEEEEEECCCCTTTS--------------CHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCCCCC--------------CCcHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCC
Confidence 4699999999985432 45566777777666654 689999999999999999998 3678
Q ss_pred cccceEEeecchhhhhhccCCCCCch-hh-HHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRP-LI-RSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (261)
+++++|++.+.....-.........+ .. .............. ...... .......... . .+. .+..
T Consensus 123 ~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~---~----~~~-~~~~ 190 (274)
T 2qru_A 123 TPQFLVNFYGYTDLEFIKEPRKLLKQAISAKEIAAIDQTKPVWD---DPFLSR-YLLYHYSIQQ---A----LLP-HFYG 190 (274)
T ss_dssp CCSCEEEESCCSCSGGGGSCCCSCSSCCCSGGGTTSCCSSCCSC---CTTCTT-HHHHHHHHHT---T----CHH-HHHT
T ss_pred CceEEEEEcccccccccCCchhhccccccHHHHhhhcccCCCCC---Cccccc-hhhhhhhhhh---c----chh-hccC
Confidence 89999988653221000000000000 00 00000000000000 000000 0000000000 0 000 0000
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChh--
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH-- 232 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~-- 232 (261)
.. .... ..........+..+ .||||++|++|..++...++.+.+..++++++++++++|..+.+.|.
T Consensus 191 ~~-~~~~---------~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~l~~~~~~~~l~~~~g~~H~~~~~~~~~~ 259 (274)
T 2qru_A 191 LP-ENGD---------WSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKKIGRTIPESTFKAVYYLEHDFLKQTKDPS 259 (274)
T ss_dssp CC-TTSC---------CGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHHHHHHSTTCEEEEECSCCSCGGGGTTSHH
T ss_pred cc-cccc---------cccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHHHHHhCCCcEEEEcCCCCcCCccCcCCHH
Confidence 00 0000 00000111124566 89999999999998877777676666678999999999998776654
Q ss_pred --hHHHHHHHHHHh
Q 024900 233 --LVNPLVESFVTR 244 (261)
Q Consensus 233 --~~~~~l~~fl~~ 244 (261)
++.+.+.+||++
T Consensus 260 ~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 260 VITLFEQLDSWLKE 273 (274)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 447777888875
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.56 E-value=8.1e-15 Score=118.28 Aligned_cols=170 Identities=11% Similarity=-0.027 Sum_probs=103.8
Q ss_pred CCeEEEecCC---------------------CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhH
Q 024900 6 SHRVYSIDLI---------------------GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGG 64 (261)
Q Consensus 6 ~~~V~~~Dl~---------------------G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg 64 (261)
+|+|+++|+| |+|.+...... .......++.+.++.+.+.+... ..++.|+||||||
T Consensus 36 g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~-~~~~~~~d~~~~~~~l~~~~~~~-~~~i~l~G~S~Gg 113 (243)
T 1ycd_A 36 NVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYH-SEISHELDISEGLKSVVDHIKAN-GPYDGIVGLSQGA 113 (243)
T ss_dssp TCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCC-CSSGGGCCCHHHHHHHHHHHHHH-CCCSEEEEETHHH
T ss_pred ceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccC-CCCcchhhHHHHHHHHHHHHHhc-CCeeEEEEeChHH
Confidence 8999999999 55655211000 00001246777777777766654 3679999999999
Q ss_pred HHHHHHHhhCcc------cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhc
Q 024900 65 LVGLQAAVMEPE------ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY 138 (261)
Q Consensus 65 ~va~~~a~~~p~------~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (261)
.+|+.+|..+++ .++.++++++.... .+.. . +
T Consensus 114 ~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~----------~~~~-------~-------------------------~ 151 (243)
T 1ycd_A 114 ALSSIITNKISELVPDHPQFKVSVVISGYSFT----------EPDP-------E-------------------------H 151 (243)
T ss_dssp HHHHHHHHHHHHHSTTCCCCSEEEEESCCCCE----------EECT-------T-------------------------S
T ss_pred HHHHHHHHHHhhcccCCCCceEEEEecCCCCC----------Cccc-------c-------------------------c
Confidence 999999997653 34455554432110 0000 0 0
Q ss_pred CCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCC-----
Q 024900 139 NDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV----- 213 (261)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----- 213 (261)
.....+..+ + . .. .+.+..+++|+|+|+|++|.++|.+.++.+.+..+.
T Consensus 152 ~~~~~~~~~-----------------~------~--~~-~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~ 205 (243)
T 1ycd_A 152 PGELRITEK-----------------F------R--DS-FAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGN 205 (243)
T ss_dssp TTCEEECGG-----------------G------T--TT-TCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTC
T ss_pred ccccccchh-----------------H------H--Hh-ccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhcccc
Confidence 000000000 0 0 00 012466899999999999999999876655443322
Q ss_pred --ccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcCC
Q 024900 214 --EDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 214 --~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~~ 247 (261)
....+++++||..+.+ +++.+.+.+||++...
T Consensus 206 ~~~~~~~~~~~gH~~~~~--~~~~~~i~~fl~~~~~ 239 (243)
T 1ycd_A 206 KEKVLAYEHPGGHMVPNK--KDIIRPIVEQITSSLQ 239 (243)
T ss_dssp TTTEEEEEESSSSSCCCC--HHHHHHHHHHHHHHHC
T ss_pred ccccEEEecCCCCcCCch--HHHHHHHHHHHHHhhh
Confidence 2556788899997765 3589999999987643
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.4e-14 Score=132.68 Aligned_cols=191 Identities=15% Similarity=0.076 Sum_probs=104.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh--cCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDF-FDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~-~~~~~~~~~~~a~dl~~~~~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
++.+|.|+++|+||+|.+........ ......+++++++.+..+++.- ..+++.++|||+||.+++.++.++|++++
T Consensus 514 ~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~ 593 (741)
T 1yr2_A 514 IDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFA 593 (741)
T ss_dssp HTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCS
T ss_pred HHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhhe
Confidence 46789999999999998742110000 0000112344444444444331 23689999999999999999999999999
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|+..+...+.. +. ....+..+. ..+++. ..++..+.+.
T Consensus 594 ~~v~~~~~~d~~~----------~~--------~~~~~~~~~--------------~~~g~~--~~~~~~~~~~------ 633 (741)
T 1yr2_A 594 AASPAVGVMDMLR----------FD--------QFTAGRYWV--------------DDYGYP--EKEADWRVLR------ 633 (741)
T ss_dssp EEEEESCCCCTTS----------GG--------GSTTGGGGH--------------HHHCCT--TSHHHHHHHH------
T ss_pred EEEecCCcccccc----------cc--------CCCCCchhH--------------HHcCCC--CCHHHHHHHH------
Confidence 9998876432110 00 000000000 001110 0111111111
Q ss_pred chHHHHHHHHhhcCCCCccccCCC-CCC-CEEEEecCCCCCCCchhhhhhc----c---CCCCccEEEcCCCCCCCCCCC
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQ-VKC-PVLIAWGDKDPWEPIELGRAYG----N---FDSVEDFIVLPNVGHCPQDEA 230 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~-i~~-Pvlii~G~~D~~~~~~~~~~~~----~---~~~~~~~~~i~~~gH~~~~e~ 230 (261)
.+ .+...+.. +++ |+||++|++|..+|+..+..+. + .....++.+++++||....+.
T Consensus 634 ----------~~----sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~ 699 (741)
T 1yr2_A 634 ----------RY----SPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPI 699 (741)
T ss_dssp ----------TT----CGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CH
T ss_pred ----------Hc----CchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCH
Confidence 11 01123455 786 9999999999999887654432 2 222368899999999977643
Q ss_pred --hhhHHHHHHHHHHhcCC
Q 024900 231 --PHLVNPLVESFVTRHAT 247 (261)
Q Consensus 231 --p~~~~~~l~~fl~~~~~ 247 (261)
+.++.+.+.+||.++..
T Consensus 700 ~~~~~~~~~~~~fl~~~l~ 718 (741)
T 1yr2_A 700 DKQIEETADVQAFLAHFTG 718 (741)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 44788889999987644
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-14 Score=132.42 Aligned_cols=189 Identities=16% Similarity=0.086 Sum_probs=112.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
++.+|.|+++|+||+|.+....... ..........+|+.+.++.+ ..+++.++|||+||.+++.++.++|+
T Consensus 472 ~~~G~~v~~~d~rG~g~~g~~~~~~---~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~ 548 (695)
T 2bkl_A 472 LDAGGVYAVANLRGGGEYGKAWHDA---GRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPE 548 (695)
T ss_dssp HHTTCEEEEECCTTSSTTCHHHHHT---TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG
T ss_pred HhCCCEEEEEecCCCCCcCHHHHHh---hHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCc
Confidence 4578999999999988774321000 00011223345555555554 24579999999999999999999999
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
+++++|+..+...+.. +. ....+..+. ..+++. ..++....
T Consensus 549 ~~~~~v~~~~~~d~~~----------~~--------~~~~~~~~~--------------~~~g~~--~~~~~~~~----- 589 (695)
T 2bkl_A 549 LYGAVVCAVPLLDMVR----------YH--------LFGSGRTWI--------------PEYGTA--EKPEDFKT----- 589 (695)
T ss_dssp GCSEEEEESCCCCTTT----------GG--------GSTTGGGGH--------------HHHCCT--TSHHHHHH-----
T ss_pred ceEEEEEcCCccchhh----------cc--------ccCCCcchH--------------HHhCCC--CCHHHHHH-----
Confidence 9999998876432110 00 000000000 001111 01111111
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCC--CCEEEEecCCCCCCCchhhhhhc----c---CCCCccEEEcCCCCCCCC
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVK--CPVLIAWGDKDPWEPIELGRAYG----N---FDSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvlii~G~~D~~~~~~~~~~~~----~---~~~~~~~~~i~~~gH~~~ 227 (261)
+..++ +...+..++ +|+|+++|++|..+|+..++.+. + .....++.+++++||...
T Consensus 590 -----------~~~~s----p~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~ 654 (695)
T 2bkl_A 590 -----------LHAYS----PYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGA 654 (695)
T ss_dssp -----------HHHHC----GGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBC
T ss_pred -----------HHhcC----hHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCC
Confidence 11111 112244444 69999999999999887654432 2 123468899999999973
Q ss_pred --CCChhhHHHHHHHHHHhcCCC
Q 024900 228 --DEAPHLVNPLVESFVTRHATP 248 (261)
Q Consensus 228 --~e~p~~~~~~l~~fl~~~~~~ 248 (261)
.+++.++...+.+||.++...
T Consensus 655 ~~~~~~~~~~~~~~~fl~~~l~~ 677 (695)
T 2bkl_A 655 DQVAKAIESSVDLYSFLFQVLDV 677 (695)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHcCC
Confidence 456677888889999887654
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=8.8e-14 Score=114.16 Aligned_cols=83 Identities=13% Similarity=0.087 Sum_probs=61.0
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCC---------------CCCCCCHH-HHHHHHHHHHHHh-cC--CCeEEEEcChhHHH
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFF---------------DKPFYTFE-TWASQLNDFCKDV-VK--DQAFFICNSIGGLV 66 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~---------------~~~~~~~~-~~a~dl~~~~~~l-~~--~~~~lvGhS~Gg~v 66 (261)
+|.|+++|+||+|.|.....+.+. ....+.+. ..++++.+++++. ++ +++.|+||||||.+
T Consensus 74 g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~ 153 (278)
T 3e4d_A 74 GLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHG 153 (278)
T ss_dssp TCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHH
T ss_pred CeEEEecCCcccCcccccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHH
Confidence 699999999999998543211000 00112333 3356677777765 55 78999999999999
Q ss_pred HHHHHhhCcccccceEEeecch
Q 024900 67 GLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 67 a~~~a~~~p~~v~~lv~~~~~~ 88 (261)
++.+|+.+|+++++++++++..
T Consensus 154 a~~~a~~~p~~~~~~v~~~~~~ 175 (278)
T 3e4d_A 154 AMTIALKNPERFKSCSAFAPIV 175 (278)
T ss_dssp HHHHHHHCTTTCSCEEEESCCS
T ss_pred HHHHHHhCCcccceEEEeCCcc
Confidence 9999999999999999998753
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.9e-13 Score=115.71 Aligned_cols=85 Identities=9% Similarity=0.044 Sum_probs=56.0
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhhCccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDK--PFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~--~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
|+++|+|+++|+||+|.|+... ..+... ..+++.+.++.+..+++.+++ +++.++||||||.+++.+|..+|++
T Consensus 107 l~~Gy~Vv~~D~rG~G~s~~~~-~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~ 185 (377)
T 4ezi_A 107 NSAGYMTVMPDYLGLGDNELTL-HPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKE 185 (377)
T ss_dssp TTTCCEEEEECCTTSTTCCCSS-CCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHH
T ss_pred HhCCcEEEEeCCCCCCCCCCCC-cccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhh
Confidence 3789999999999999997521 111000 001222333334444555554 6899999999999999999987763
Q ss_pred -----ccceEEeecch
Q 024900 78 -----CRGMILLNISL 88 (261)
Q Consensus 78 -----v~~lv~~~~~~ 88 (261)
+.+.+..+++.
T Consensus 186 ~~~l~l~g~~~~~~p~ 201 (377)
T 4ezi_A 186 YPDLPVSAVAPGSAPY 201 (377)
T ss_dssp CTTSCCCEEEEESCCC
T ss_pred CCCCceEEEEecCccc
Confidence 56666666543
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.4e-14 Score=125.67 Aligned_cols=84 Identities=11% Similarity=0.090 Sum_probs=56.8
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHh-hCc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFD--KPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAV-MEP 75 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~--~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~-~~p 75 (261)
.++.+|+|+++|+||||.|+.+.. .... ...+++.++++++..+++.+++ ++++++||||||.+++.+|. ..+
T Consensus 113 l~~~G~~V~~~D~~G~G~s~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~ 191 (397)
T 3h2g_A 113 LASQGYVVVGSDYLGLGKSNYAYH-PYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEA 191 (397)
T ss_dssp TGGGTCEEEEECCTTSTTCCCSSC-CTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEEecCCCCCCCCCCcc-chhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhh
Confidence 346789999999999999974321 0000 0002455666666777777776 68999999999999998874 334
Q ss_pred c-----cccceEEeec
Q 024900 76 E-----ICRGMILLNI 86 (261)
Q Consensus 76 ~-----~v~~lv~~~~ 86 (261)
+ .+.+++..++
T Consensus 192 ~~~~~~~~~~~~~~~~ 207 (397)
T 3h2g_A 192 HLSKEFHLVASAPISG 207 (397)
T ss_dssp HCTTTSEEEEEEEESC
T ss_pred hcCcCcceEEEecccc
Confidence 3 3555554443
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.3e-14 Score=104.94 Aligned_cols=65 Identities=20% Similarity=0.308 Sum_probs=58.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
|+++|+|+++|+||||.|..+. . . ++++++++.++++.++.++++++||||||.+++.+|..+|.
T Consensus 39 l~~~~~v~~~d~~G~G~s~~~~-------~-~-~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 39 LPEGYAFYLLDLPGYGRTEGPR-------M-A-PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CCTTSEEEEECCTTSTTCCCCC-------C-C-HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HhCCcEEEEECCCCCCCCCCCC-------C-C-HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 5677999999999999998643 1 2 89999999999999999999999999999999999999985
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.8e-14 Score=131.72 Aligned_cols=191 Identities=15% Similarity=0.123 Sum_probs=110.9
Q ss_pred cC-CCCeEEEecCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHH--hcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LA-KSHRVYSIDLIGYGYSDKPNPRDF-FDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~G~S~~~~~~~~-~~~~~~~~~~~a~dl~~~~~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
++ .+|.|+++|+||+|.+........ .......++++++.+..+++. ...+++.++|||+||.+++.++.++|+++
T Consensus 492 ~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~ 571 (710)
T 2xdw_A 492 VRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLF 571 (710)
T ss_dssp HHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGC
T ss_pred HHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccce
Confidence 34 789999999999998742110000 000011233444433333332 12358999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
+++|+..+...+.. +. .. ..+..+. ..+++. ..++....+
T Consensus 572 ~~~v~~~~~~d~~~----------~~-------~~-~~~~~~~--------------~~~g~~--~~~~~~~~~------ 611 (710)
T 2xdw_A 572 GCVIAQVGVMDMLK----------FH-------KY-TIGHAWT--------------TDYGCS--DSKQHFEWL------ 611 (710)
T ss_dssp SEEEEESCCCCTTT----------GG-------GS-TTGGGGH--------------HHHCCT--TSHHHHHHH------
T ss_pred eEEEEcCCcccHhh----------cc-------cc-CCChhHH--------------HhCCCC--CCHHHHHHH------
Confidence 99998876432110 00 00 0000000 001110 011111111
Q ss_pred CchHHHHHHHHhhcCCCCccccCC-----CCCC-CEEEEecCCCCCCCchhhhhhcc----C-------CCCccEEEcCC
Q 024900 159 TGAADVFLEFICYSGGPLPEELLP-----QVKC-PVLIAWGDKDPWEPIELGRAYGN----F-------DSVEDFIVLPN 221 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~-----~i~~-Pvlii~G~~D~~~~~~~~~~~~~----~-------~~~~~~~~i~~ 221 (261)
..++ +...+. .+++ |+||++|++|..+|+..+..+.+ . ....++.++++
T Consensus 612 ----------~~~s----p~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 677 (710)
T 2xdw_A 612 ----------IKYS----PLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTK 677 (710)
T ss_dssp ----------HHHC----GGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESS
T ss_pred ----------HHhC----cHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCC
Confidence 1111 011233 6887 99999999999998876544322 1 22347889999
Q ss_pred CCCCCCCC--ChhhHHHHHHHHHHhcCC
Q 024900 222 VGHCPQDE--APHLVNPLVESFVTRHAT 247 (261)
Q Consensus 222 ~gH~~~~e--~p~~~~~~l~~fl~~~~~ 247 (261)
+||..... ++.++.+.+.+||.++..
T Consensus 678 ~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 705 (710)
T 2xdw_A 678 AGHGAGKPTAKVIEEVSDMFAFIARCLN 705 (710)
T ss_dssp CCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 99998763 456788888999987643
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.4e-13 Score=116.08 Aligned_cols=189 Identities=12% Similarity=0.047 Sum_probs=106.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hcCCCeEEEEcChhHHHHHHHHhhCccc----cc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VVKDQAFFICNSIGGLVGLQAAVMEPEI----CR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~-l~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~ 79 (261)
.+|.|+++|+|+.+....+ ..+++..+.+..+.+. +..+++.|+|||+||.+++.+|+.+|++ ++
T Consensus 110 ~g~~vv~~dyr~~p~~~~~----------~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~ 179 (322)
T 3fak_A 110 SQAAALLLDYRLAPEHPFP----------AAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPA 179 (322)
T ss_dssp HTSEEEEECCCCTTTSCTT----------HHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCS
T ss_pred cCCEEEEEeCCCCCCCCCC----------cHHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCce
Confidence 3899999999987765432 1345555444444444 2345899999999999999999998876 99
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|++++...... . . ..+........ ......+..+. ..+.... ..
T Consensus 180 ~~vl~~p~~~~~~------~-~---~~~~~~~~~~~--------~~~~~~~~~~~---------------~~~~~~~-~~ 225 (322)
T 3fak_A 180 SAIPISPWADMTC------T-N---DSFKTRAEADP--------MVAPGGINKMA---------------ARYLNGA-DA 225 (322)
T ss_dssp EEEEESCCCCTTC------C-C---THHHHTTTTCC--------SCCSSHHHHHH---------------HHHHTTS-CT
T ss_pred EEEEECCEecCcC------C-C---cCHHHhCccCc--------ccCHHHHHHHH---------------HHhcCCC-CC
Confidence 9999987532210 0 0 00000000000 00000000000 0000000 00
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCch--hhhhhccCCCCccEEEcCCCCCCCC-----CCChh
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQ-----DEAPH 232 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~-----~e~p~ 232 (261)
. +.+ .... ...+..+ .|+||++|++|.+++.. ..+.+.+.....+++++++++|..+ .++++
T Consensus 226 ~--~~~-------~sp~-~~~~~~~-pP~li~~g~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~ 294 (322)
T 3fak_A 226 K--HPY-------ASPN-FANLKGL-PPLLIHVGRDEVLLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGK 294 (322)
T ss_dssp T--CTT-------TCGG-GSCCTTC-CCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHH
T ss_pred C--Ccc-------cCCC-cccccCC-ChHhEEEcCcCccHHHHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHH
Confidence 0 000 0000 1122332 49999999999875421 1233444444569999999999865 44568
Q ss_pred hHHHHHHHHHHhcCCC
Q 024900 233 LVNPLVESFVTRHATP 248 (261)
Q Consensus 233 ~~~~~l~~fl~~~~~~ 248 (261)
++.+.+.+||+++...
T Consensus 295 ~~~~~i~~fl~~~l~~ 310 (322)
T 3fak_A 295 QAIVRVGEFMREQWAA 310 (322)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8899999999876543
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.47 E-value=9.3e-13 Score=108.20 Aligned_cols=83 Identities=14% Similarity=0.173 Sum_probs=58.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCC---CC------------CCCC-HHHHHHHHHHHHHHh-cC-CCeEEEEcChhHHH
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFF---DK------------PFYT-FETWASQLNDFCKDV-VK-DQAFFICNSIGGLV 66 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~---~~------------~~~~-~~~~a~dl~~~~~~l-~~-~~~~lvGhS~Gg~v 66 (261)
.+|.|+++|.+|+|.+..... .+. .. ..+. ....++++..+++.. .. +++.|+||||||.+
T Consensus 76 ~g~~vv~pd~~~~g~~~~~~~-~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~ 154 (280)
T 3i6y_A 76 LGIAIVAPDTSPRGEGVADDE-GYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHG 154 (280)
T ss_dssp HTCEEEEECSSCCSTTCCCCS-STTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHH
T ss_pred CCeEEEEeCCcccccccCccc-ccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHH
Confidence 368999999998887643210 000 00 0112 233456777777544 34 78999999999999
Q ss_pred HHHHHhhCcccccceEEeecch
Q 024900 67 GLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 67 a~~~a~~~p~~v~~lv~~~~~~ 88 (261)
++.+|+.+|++++++|++++..
T Consensus 155 a~~~a~~~p~~~~~~v~~s~~~ 176 (280)
T 3i6y_A 155 ALTIALRNPERYQSVSAFSPIN 176 (280)
T ss_dssp HHHHHHHCTTTCSCEEEESCCC
T ss_pred HHHHHHhCCccccEEEEeCCcc
Confidence 9999999999999999998753
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.46 E-value=9.8e-14 Score=117.07 Aligned_cols=188 Identities=14% Similarity=0.054 Sum_probs=103.5
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcC--CCeEEEEcChhHHHHHHHHhhCccc---
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VVK--DQAFFICNSIGGLVGLQAAVMEPEI--- 77 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~---l~~--~~~~lvGhS~Gg~va~~~a~~~p~~--- 77 (261)
+|.|+++|+|+.+....+. .+++..+.+..+.+. +++ +++.|+|||+||.+++.+|..+|++
T Consensus 118 g~~V~~~dyr~~p~~~~~~----------~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~ 187 (326)
T 3ga7_A 118 GCTVIGIDYSLSPQARYPQ----------AIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIR 187 (326)
T ss_dssp CSEEEEECCCCTTTSCTTH----------HHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEeeCCCCCCCCCCc----------HHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCC
Confidence 8999999999887664321 233333222222221 233 5899999999999999999998875
Q ss_pred ---ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhc
Q 024900 78 ---CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (261)
Q Consensus 78 ---v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (261)
++++|++.+..... .. ... ....... . ......+..+........
T Consensus 188 ~~~~~~~vl~~~~~~~~---------~~--~~~-~~~~~~~------~-~l~~~~~~~~~~~~~~~~------------- 235 (326)
T 3ga7_A 188 CGNVIAILLWYGLYGLQ---------DS--VSR-RLFGGAW------D-GLTREDLDMYEKAYLRND------------- 235 (326)
T ss_dssp SSEEEEEEEESCCCSCS---------CC--HHH-HHCCCTT------T-TCCHHHHHHHHHHHCSSG-------------
T ss_pred ccCceEEEEeccccccC---------CC--hhH-hhhcCCC------C-CCCHHHHHHHHHHhCCCC-------------
Confidence 88888877542110 00 000 0000000 0 001111111111100000
Q ss_pred cCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchh--hhhhccCCCCccEEEcCCCCCCCC-----
Q 024900 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL--GRAYGNFDSVEDFIVLPNVGHCPQ----- 227 (261)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~--~~~~~~~~~~~~~~~i~~~gH~~~----- 227 (261)
.. ..+.+ .......+.+..+|++|++|++|.+++... .+.+.+.....++++++++||...
T Consensus 236 --~~--~~~~~--------~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~ 303 (326)
T 3ga7_A 236 --ED--RESPW--------YCLFNNDLTRDVPPCFIASAEFDPLIDDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRM 303 (326)
T ss_dssp --GG--GGCTT--------TSGGGSCCSSCCCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTT
T ss_pred --Cc--cCCcc--------cCCCcchhhcCCCCEEEEecCcCcCHHHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCc
Confidence 00 00000 000012344567799999999999875221 223444444469999999999864
Q ss_pred CCChhhHHHHHHHHHHhcCC
Q 024900 228 DEAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 228 ~e~p~~~~~~l~~fl~~~~~ 247 (261)
.++.+++.+.+.+||+++..
T Consensus 304 ~~~~~~~~~~~~~fl~~~l~ 323 (326)
T 3ga7_A 304 MTIADDALQDGARFFMARMK 323 (326)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhc
Confidence 34468889999999987643
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.46 E-value=8e-14 Score=117.36 Aligned_cols=184 Identities=13% Similarity=0.065 Sum_probs=106.9
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhcC--CCeEEEEcChhHHHHHHHHhhCccc---
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC---KDVVK--DQAFFICNSIGGLVGLQAAVMEPEI--- 77 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~---~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~--- 77 (261)
+|.|+++|+|+.+....+. .+++..+.+..+. ..+++ +++.|+|||+||.+++.+|..++++
T Consensus 116 g~~vv~~dyr~~p~~~~p~----------~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~ 185 (317)
T 3qh4_A 116 RCAVVSVDYRLAPEHPYPA----------ALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLP 185 (317)
T ss_dssp TSEEEEECCCCTTTSCTTH----------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSC
T ss_pred CCEEEEecCCCCCCCCCch----------HHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCC
Confidence 7999999999887664321 2333333222222 22444 4899999999999999999987774
Q ss_pred -ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 78 -CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 78 -v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
+++++++++..... .. ...... .... ..........+........
T Consensus 186 ~~~~~vl~~p~~~~~--------~~---~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~-------------- 231 (317)
T 3qh4_A 186 PVIFQLLHQPVLDDR--------PT---ASRSEF-RATP--------AFDGEAASLMWRHYLAGQT-------------- 231 (317)
T ss_dssp CCCEEEEESCCCCSS--------CC---HHHHHT-TTCS--------SSCHHHHHHHHHHHHTTCC--------------
T ss_pred CeeEEEEECceecCC--------CC---cCHHHh-cCCC--------CcCHHHHHHHHHHhcCCCC--------------
Confidence 89999888753210 00 000000 0000 0001101111100000000
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCC--chhhhhhccCCCCccEEEcCCCCCC-----CCCC
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP--IELGRAYGNFDSVEDFIVLPNVGHC-----PQDE 229 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~-----~~~e 229 (261)
..... .......+..+ .|++|++|++|.+++ ...++.+.+.....+++++++++|. +..+
T Consensus 232 ~~~~~------------~p~~~~~l~~l-pP~li~~G~~D~~~~~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~ 298 (317)
T 3qh4_A 232 PSPES------------VPGRRGQLAGL-PATLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWT 298 (317)
T ss_dssp CCTTT------------CGGGCSCCTTC-CCEEEEEEEESTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSH
T ss_pred CCccc------------CCCcccccCCC-CceeEEecCcCCCchhHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCch
Confidence 00000 00001112222 499999999999877 3344556655566899999999998 6678
Q ss_pred ChhhHHHHHHHHHHhcC
Q 024900 230 APHLVNPLVESFVTRHA 246 (261)
Q Consensus 230 ~p~~~~~~l~~fl~~~~ 246 (261)
.++++.+.+.+||+++.
T Consensus 299 ~~~~~~~~~~~~l~~~l 315 (317)
T 3qh4_A 299 TSQRLFAMQGHALADAF 315 (317)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88999999999998754
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=6.4e-13 Score=114.11 Aligned_cols=188 Identities=14% Similarity=-0.022 Sum_probs=105.2
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----------CC-CeEEEEcChhHHHHHHHHhhC
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----------KD-QAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~----------~~-~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+|.|+++|+|+.+.... ....+|+.+.++.+. .+ ++.|+|||+||.+|+.+|.+.
T Consensus 145 g~~Vv~~dyR~~p~~~~--------------~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~ 210 (365)
T 3ebl_A 145 KGVVVSVNYRRAPEHRY--------------PCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRA 210 (365)
T ss_dssp TSEEEEECCCCTTTSCT--------------THHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHH
T ss_pred CCEEEEeeCCCCCCCCC--------------cHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHH
Confidence 79999999998764432 122344444433332 24 899999999999999999988
Q ss_pred cc---cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHH
Q 024900 75 PE---ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEK 151 (261)
Q Consensus 75 p~---~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (261)
++ +++++|++++..... ........... . ..........+..........
T Consensus 211 ~~~~~~~~g~vl~~p~~~~~----------~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~-------- 263 (365)
T 3ebl_A 211 ADEGVKVCGNILLNAMFGGT----------ERTESERRLDG-K--------YFVTLQDRDWYWKAYLPEDAD-------- 263 (365)
T ss_dssp HHTTCCCCEEEEESCCCCCS----------SCCHHHHHHTT-T--------SSCCHHHHHHHHHHHSCTTCC--------
T ss_pred HhcCCceeeEEEEccccCCC----------cCChhhhhcCC-C--------cccCHHHHHHHHHHhCCCCCC--------
Confidence 77 899999998753211 00000000000 0 000011111111100000000
Q ss_pred HhccCCCCchHHHHHHHHhhcCCCCccccCCCCC-CCEEEEecCCCCCCCch--hhhhhccCCCCccEEEcCCCCCCCC-
Q 024900 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVK-CPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQ- 227 (261)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~- 227 (261)
. .+. ...........+..+. .|+||++|++|.+++.. ..+.+.+.....++++++++||..+
T Consensus 264 -------~--~~~-----~~~p~~~~~~~l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~ 329 (365)
T 3ebl_A 264 -------R--DHP-----ACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYL 329 (365)
T ss_dssp -------T--TST-----TTCTTSTTCCCCTTSCCCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGG
T ss_pred -------C--CCc-----ccCCCCCcchhhccCCCCCEEEEEcCcccchhHHHHHHHHHHHCCCCEEEEEECCCcEEEec
Confidence 0 000 0000000012234333 48999999999876542 2334555555579999999999855
Q ss_pred ---CCChhhHHHHHHHHHHhcCCC
Q 024900 228 ---DEAPHLVNPLVESFVTRHATP 248 (261)
Q Consensus 228 ---~e~p~~~~~~l~~fl~~~~~~ 248 (261)
.++++++.+.+.+||+++...
T Consensus 330 ~~~~~~~~~~~~~i~~Fl~~~~~~ 353 (365)
T 3ebl_A 330 LPNTVHYHEVMEEISDFLNANLYY 353 (365)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHCC-
T ss_pred cCCCHHHHHHHHHHHHHHHHhhhc
Confidence 566778999999999887554
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.45 E-value=7.5e-13 Score=104.93 Aligned_cols=154 Identities=14% Similarity=0.197 Sum_probs=98.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cC--CCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VK--DQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.++.|++||.+|++--+.....+ .......+++..+.+..+++.+ ++ +++.|+|+|+||.+++.+++.+|++++
T Consensus 48 ~~~~v~~P~~~g~~w~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~ 126 (210)
T 4h0c_A 48 DEMAIYAPQATNNSWYPYSFMAP-VQQNQPALDSALALVGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYG 126 (210)
T ss_dssp TTEEEEEECCGGGCSSSSCTTSC-GGGGTTHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCS
T ss_pred CCeEEEeecCCCCCccccccCCC-cccchHHHHHHHHHHHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCC
Confidence 57999999999876221110000 0001123455455555554433 33 579999999999999999999999999
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|.+++.+.. .... . .
T Consensus 127 ~vv~~sg~l~~----------~~~~------------~----~------------------------------------- 143 (210)
T 4h0c_A 127 GIIAFTGGLIG----------QELA------------I----G------------------------------------- 143 (210)
T ss_dssp EEEEETCCCCS----------SSCC------------G----G-------------------------------------
T ss_pred EEEEecCCCCC----------hhhh------------h----h-------------------------------------
Confidence 99988763210 0000 0 0
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
.. .. ..-++|+++++|++|+++|.+.++. +++.....+++++|+.||.. .++++.
T Consensus 144 ---------------~~-~~--~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i---~~~el~ 202 (210)
T 4h0c_A 144 ---------------NY-KG--DFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTI---SGDEIQ 202 (210)
T ss_dssp ---------------GC-CB--CCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSC---CHHHHH
T ss_pred ---------------hh-hh--hccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCc---CHHHHH
Confidence 00 00 1124799999999999999987654 34444446889999999974 466664
Q ss_pred HHHHHHHHh
Q 024900 236 PLVESFVTR 244 (261)
Q Consensus 236 ~~l~~fl~~ 244 (261)
.+++||.|
T Consensus 203 -~i~~wL~k 210 (210)
T 4h0c_A 203 -LVNNTILK 210 (210)
T ss_dssp -HHHHTTTC
T ss_pred -HHHHHHcC
Confidence 56778753
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.43 E-value=8.3e-13 Score=123.58 Aligned_cols=194 Identities=11% Similarity=0.133 Sum_probs=110.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCC-CC-CCCCCCCHHHHHHHHHHHHHH--hcCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPR-DF-FDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~-~~-~~~~~~~~~~~a~dl~~~~~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
++++|.|+++|+||+|.+...... .. ......+++++++.+..+++. ...+++.++|+|+||.+++.++..+|+++
T Consensus 535 ~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~ 614 (751)
T 2xe4_A 535 CDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLF 614 (751)
T ss_dssp HTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGC
T ss_pred HhCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchhe
Confidence 357899999999999986431100 00 000112455555555554443 12368999999999999999999999999
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhh-hhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLR-NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
+++|+..+..-... .... ..+.. .. . . ..+++. ..++...
T Consensus 615 ~a~v~~~~~~d~~~----------------~~~~~~~~~~---~~---------~-~-~~~g~p--~~~~~~~------- 655 (751)
T 2xe4_A 615 KVALAGVPFVDVMT----------------TMCDPSIPLT---TG---------E-W-EEWGNP--NEYKYYD------- 655 (751)
T ss_dssp SEEEEESCCCCHHH----------------HHTCTTSTTH---HH---------H-T-TTTCCT--TSHHHHH-------
T ss_pred eEEEEeCCcchHHh----------------hhcccCcccc---hh---------h-H-HHcCCC--CCHHHHH-------
Confidence 99998876421110 0000 00000 00 0 0 001111 1111111
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCC-EEEEecCCCCCCCchhhhhhcc----CCCCcc---EEEcCCCCCCCCCC
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCP-VLIAWGDKDPWEPIELGRAYGN----FDSVED---FIVLPNVGHCPQDE 229 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~G~~D~~~~~~~~~~~~~----~~~~~~---~~~i~~~gH~~~~e 229 (261)
.+..++ +...+.++++| +||++|++|..+|++.+..+.+ .....+ +.+++++||....+
T Consensus 656 ---------~~~~~s----p~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~ 722 (751)
T 2xe4_A 656 ---------YMLSYS----PMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKD 722 (751)
T ss_dssp ---------HHHHHC----TGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSS
T ss_pred ---------HHHhcC----hhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCC
Confidence 111111 12335678998 9999999999998876544332 111123 33449999998876
Q ss_pred Chhh--HHHHHHHHHHhcCCC
Q 024900 230 APHL--VNPLVESFVTRHATP 248 (261)
Q Consensus 230 ~p~~--~~~~l~~fl~~~~~~ 248 (261)
.++. ....+.+||.++...
T Consensus 723 ~~~~~~~~~~~~~Fl~~~l~~ 743 (751)
T 2xe4_A 723 RYKFWKESAIQQAFVCKHLKS 743 (751)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHHHhCC
Confidence 6554 345678899877543
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.1e-13 Score=119.40 Aligned_cols=84 Identities=15% Similarity=0.139 Sum_probs=66.9
Q ss_pred CCeEEEecCCCCCCCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHhcC-------CCeEEEEcChhHHHHHHHHhhCc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRD---FFDKPFYTFETWASQLNDFCKDVVK-------DQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~---~~~~~~~~~~~~a~dl~~~~~~l~~-------~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
+++|+++|+||||+|....... .......+.+.+++|+..+++.+.. .+++++||||||++|+.++.+||
T Consensus 69 ~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP 148 (446)
T 3n2z_B 69 KAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYP 148 (446)
T ss_dssp TEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCT
T ss_pred CCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhh
Confidence 4699999999999996421100 0111345889999999999988865 38999999999999999999999
Q ss_pred ccccceEEeecchh
Q 024900 76 EICRGMILLNISLR 89 (261)
Q Consensus 76 ~~v~~lv~~~~~~~ 89 (261)
+.|.++|+.+++..
T Consensus 149 ~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 149 HMVVGALAASAPIW 162 (446)
T ss_dssp TTCSEEEEETCCTT
T ss_pred ccccEEEEeccchh
Confidence 99999998876543
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-12 Score=106.56 Aligned_cols=85 Identities=16% Similarity=0.225 Sum_probs=55.0
Q ss_pred CCCCeEEEecC--CCCCCCCCCCCCCC-CCCCCC------------C-HHHHHHHHHHHHH-HhcC--CCeEEEEcChhH
Q 024900 4 AKSHRVYSIDL--IGYGYSDKPNPRDF-FDKPFY------------T-FETWASQLNDFCK-DVVK--DQAFFICNSIGG 64 (261)
Q Consensus 4 ~~~~~V~~~Dl--~G~G~S~~~~~~~~-~~~~~~------------~-~~~~a~dl~~~~~-~l~~--~~~~lvGhS~Gg 64 (261)
..+|.|+++|. ||+|.+........ .....| . ....++++..+++ .+++ +++.|+||||||
T Consensus 73 ~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG 152 (282)
T 3fcx_A 73 EHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGG 152 (282)
T ss_dssp HHTCEEEEECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHH
T ss_pred cCCeEEEEeccccCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchH
Confidence 35799999999 76665432100000 000001 1 2234456666666 4433 679999999999
Q ss_pred HHHHHHHhhCcccccceEEeecch
Q 024900 65 LVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 65 ~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
.+|+.+|+.+|++++++|++++..
T Consensus 153 ~~a~~~a~~~p~~~~~~v~~s~~~ 176 (282)
T 3fcx_A 153 HGALICALKNPGKYKSVSAFAPIC 176 (282)
T ss_dssp HHHHHHHHTSTTTSSCEEEESCCC
T ss_pred HHHHHHHHhCcccceEEEEeCCcc
Confidence 999999999999999999998753
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-12 Score=108.02 Aligned_cols=75 Identities=11% Similarity=0.042 Sum_probs=60.9
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC---cccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME---PEICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~~l 81 (261)
.+|+|+++|+||||.++.. .+.+++++.+..+++.++.++++||||||||.++..++..+ +++|+++
T Consensus 93 ~Gy~V~a~DlpG~G~~~~~----------~~~~~la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~l 162 (316)
T 3icv_A 93 LGYTPCWISPPPFMLNDTQ----------VNTEYMVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRL 162 (316)
T ss_dssp TTCEEEEECCTTTTCSCHH----------HHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEE
T ss_pred CCCeEEEecCCCCCCCcHH----------HHHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceE
Confidence 4799999999999987531 24556677777777778889999999999999997766665 5899999
Q ss_pred EEeecchh
Q 024900 82 ILLNISLR 89 (261)
Q Consensus 82 v~~~~~~~ 89 (261)
|+++++..
T Consensus 163 V~lapp~~ 170 (316)
T 3icv_A 163 MAFAPDYK 170 (316)
T ss_dssp EEESCCTT
T ss_pred EEECCCCC
Confidence 99998654
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.40 E-value=6.3e-13 Score=112.04 Aligned_cols=75 Identities=19% Similarity=0.283 Sum_probs=68.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||+|.|+.+. .+.+++++++.++++.++.++++||||||||.++..++..+|++|+++|++
T Consensus 40 ~G~~V~~~d~~g~g~s~~~~---------~~~~~l~~~i~~~l~~~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i 110 (320)
T 1ys1_X 40 RGATVYVANLSGFQSDDGPN---------GRGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTI 110 (320)
T ss_dssp TTCCEEECCCCSSCCSSSTT---------SHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCCCCCCCC---------CCHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEE
Confidence 46999999999999996532 478999999999999999999999999999999999999999999999999
Q ss_pred ecch
Q 024900 85 NISL 88 (261)
Q Consensus 85 ~~~~ 88 (261)
+++.
T Consensus 111 ~~p~ 114 (320)
T 1ys1_X 111 GTPH 114 (320)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 9754
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.40 E-value=3.3e-12 Score=110.11 Aligned_cols=83 Identities=12% Similarity=0.001 Sum_probs=57.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhcCC--CeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPR-DFFDKPFYTFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~-~~~~~~~~~~~~~a~dl~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.++.|+++|.+|.|........ .........+.+..+.+..+++.+++. ++.|+||||||.+++.+++.+|++++++
T Consensus 212 ~~~~vv~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~ 291 (380)
T 3doh_A 212 HPCFVLAPQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAA 291 (380)
T ss_dssp SCCEEEEECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEE
T ss_pred CCEEEEEecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEE
Confidence 4578999999987654321100 000001234555666666666666553 7999999999999999999999999999
Q ss_pred EEeecc
Q 024900 82 ILLNIS 87 (261)
Q Consensus 82 v~~~~~ 87 (261)
|++++.
T Consensus 292 v~~sg~ 297 (380)
T 3doh_A 292 IPICGG 297 (380)
T ss_dssp EEESCC
T ss_pred EEecCC
Confidence 988863
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.4e-12 Score=111.03 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=29.0
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
+++.++|||+||.+++.++...| +++++|++++
T Consensus 219 ~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~ 251 (383)
T 3d59_A 219 EKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDA 251 (383)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESC
T ss_pred cceeEEEEChhHHHHHHHHhhCC-CccEEEEeCC
Confidence 47999999999999999988765 6999998875
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.39 E-value=3.5e-12 Score=104.76 Aligned_cols=83 Identities=11% Similarity=0.073 Sum_probs=57.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCC-----------CCC---CCCCCC-HHHHHHHHHHHHHHhc-C-CCeEEEEcChhHHHH
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPR-----------DFF---DKPFYT-FETWASQLNDFCKDVV-K-DQAFFICNSIGGLVG 67 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~-----------~~~---~~~~~~-~~~~a~dl~~~~~~l~-~-~~~~lvGhS~Gg~va 67 (261)
.++.|+++|.+|+|.+...... +.. ....+. ....++++..++++.. . +++.|+||||||.++
T Consensus 74 ~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a 153 (280)
T 3ls2_A 74 LGIAIVAPDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGA 153 (280)
T ss_dssp HTCEEEECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHH
T ss_pred CCeEEEEeCCcccccccccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHH
Confidence 3689999999988876322100 000 001112 2334566666666542 2 689999999999999
Q ss_pred HHHHhhCcccccceEEeecc
Q 024900 68 LQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 68 ~~~a~~~p~~v~~lv~~~~~ 87 (261)
+.+|+.+|+.+++++++++.
T Consensus 154 ~~~a~~~p~~~~~~~~~s~~ 173 (280)
T 3ls2_A 154 LMIALKNPQDYVSASAFSPI 173 (280)
T ss_dssp HHHHHHSTTTCSCEEEESCC
T ss_pred HHHHHhCchhheEEEEecCc
Confidence 99999999999999999875
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=8e-13 Score=122.61 Aligned_cols=193 Identities=16% Similarity=0.094 Sum_probs=105.2
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh--cCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDF-FDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~-~~~~~~~~~~~a~dl~~~~~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
++.+|.|+++|+||.|.+........ ......+++++++.+..+++.- ..+++.++|||+||++++.++.++|++++
T Consensus 480 ~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~ 559 (693)
T 3iuj_A 480 LDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMR 559 (693)
T ss_dssp HHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCS
T ss_pred HHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCcccee
Confidence 45789999999999987642110000 0000112334444333333321 12589999999999999999999999999
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|+..+..-+.. +. . ...+.... ..+++. ...++....+
T Consensus 560 a~v~~~~~~d~~~----------~~-------~-~~~~~~~~--------------~~~g~p-~~~~~~~~~~------- 599 (693)
T 3iuj_A 560 VALPAVGVLDMLR----------YH-------T-FTAGTGWA--------------YDYGTS-ADSEAMFDYL------- 599 (693)
T ss_dssp EEEEESCCCCTTT----------GG-------G-SGGGGGCH--------------HHHCCT-TSCHHHHHHH-------
T ss_pred EEEecCCcchhhh----------hc-------c-CCCchhHH--------------HHcCCc-cCHHHHHHHH-------
Confidence 9998776432110 00 0 00000000 001111 0111101111
Q ss_pred chHHHHHHHHhhcCCCCccccCCC-CCCC-EEEEecCCCCCCCchhhhhhc----cCC---CCccEEEcCCCCCCCCC--
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQ-VKCP-VLIAWGDKDPWEPIELGRAYG----NFD---SVEDFIVLPNVGHCPQD-- 228 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~-i~~P-vlii~G~~D~~~~~~~~~~~~----~~~---~~~~~~~i~~~gH~~~~-- 228 (261)
..++ +...+.+ +++| +||++|++|..+|+..+..+. +.. ...++.+++++||...-
T Consensus 600 ---------~~~s----p~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~ 666 (693)
T 3iuj_A 600 ---------KGYS----PLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPV 666 (693)
T ss_dssp ---------HHHC----HHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHH
T ss_pred ---------HhcC----HHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccH
Confidence 0110 0123455 7898 999999999999887654432 221 23578899999999764
Q ss_pred CChhhHHHHHHHHHHhcCCC
Q 024900 229 EAPHLVNPLVESFVTRHATP 248 (261)
Q Consensus 229 e~p~~~~~~l~~fl~~~~~~ 248 (261)
++..++.+.+.+||.++...
T Consensus 667 ~~~~~~~~~~~~fl~~~l~~ 686 (693)
T 3iuj_A 667 AKLIEQSADIYAFTLYEMGY 686 (693)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 56667888888999887654
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.38 E-value=5.9e-12 Score=102.82 Aligned_cols=61 Identities=20% Similarity=0.275 Sum_probs=44.0
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhhhc-cC-CCCccEEEcCCCCCCCCCCCh-hhHHHHHHHHHHhcC
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRAYG-NF-DSVEDFIVLPNVGHCPQDEAP-HLVNPLVESFVTRHA 246 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~~~-~~-~~~~~~~~i~~~gH~~~~e~p-~~~~~~l~~fl~~~~ 246 (261)
.+|++|+|+++|++|..+|++.+..+. .+ .+..+++++++ ||. +-| .+..+.+.+|+.+++
T Consensus 195 ~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~---~~p~~e~~~~~~~fl~~hL 258 (259)
T 4ao6_A 195 PQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHS---AVPTWEMFAGTVDYLDQRL 258 (259)
T ss_dssp GGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTT---CCCHHHHTHHHHHHHHHHC
T ss_pred ccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCC---CcCHHHHHHHHHHHHHHhc
Confidence 457899999999999999998876543 33 34456777766 775 233 356667778998765
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.36 E-value=5.7e-12 Score=103.77 Aligned_cols=52 Identities=15% Similarity=0.174 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHh--cCCCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 37 ETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 37 ~~~a~dl~~~~~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
...++++..++++. ..+++.|+||||||.+|+.+|+.+|+++++++++++..
T Consensus 127 ~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~ 180 (283)
T 4b6g_A 127 DYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPIL 180 (283)
T ss_dssp HHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCC
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCcc
Confidence 33366787877776 33689999999999999999999999999999998753
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.8e-13 Score=120.53 Aligned_cols=76 Identities=9% Similarity=0.047 Sum_probs=66.2
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----c--CCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----V--KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
+|+|+++|++|||.|..+. ..++++.+++|+.++++.+ + .++++||||||||.||+.+|..+|++|+
T Consensus 100 ~~~Vi~~D~~g~G~S~~~~-------~~~~~~~~~~dl~~~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~ 172 (452)
T 1w52_X 100 TTNCISVDWSSGAKAEYTQ-------AVQNIRIVGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVG 172 (452)
T ss_dssp CCEEEEEECHHHHTSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSS
T ss_pred CCEEEEEecccccccccHH-------HHHhHHHHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhccccee
Confidence 8999999999999997432 2246788899999999888 5 6799999999999999999999999999
Q ss_pred ceEEeecch
Q 024900 80 GMILLNISL 88 (261)
Q Consensus 80 ~lv~~~~~~ 88 (261)
++|+++++.
T Consensus 173 ~iv~ldpa~ 181 (452)
T 1w52_X 173 RVTGLDPAE 181 (452)
T ss_dssp EEEEESCBC
T ss_pred eEEeccccc
Confidence 999998753
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.9e-12 Score=102.67 Aligned_cols=76 Identities=17% Similarity=0.175 Sum_probs=59.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc------CCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.++.|+.+|.+++|.++.+. .....+.+++|+..+++.+. .+++.++|||+||.+++.+|. +|+++
T Consensus 70 ~~~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~ 141 (263)
T 2uz0_A 70 TNLIVVMPNTSNGWYTDTQY-------GFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRF 141 (263)
T ss_dssp CCCEEEECCCTTSTTSBCTT-------SCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCC
T ss_pred CCeEEEEECCCCCccccCCC-------cccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-Ccccc
Confidence 46778888888887765432 11235677888888888752 267999999999999999999 99999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
+++|++++..
T Consensus 142 ~~~v~~~~~~ 151 (263)
T 2uz0_A 142 SHAASFSGAL 151 (263)
T ss_dssp SEEEEESCCC
T ss_pred ceEEEecCCc
Confidence 9999998764
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-13 Score=120.39 Aligned_cols=77 Identities=10% Similarity=0.030 Sum_probs=66.4
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cC--CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VK--DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~--~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|+|+++|+||||.|..+. ..+++..+++|+.++++.+ +. ++++||||||||.||+.+|..+|++|
T Consensus 99 ~~~~Vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v 171 (452)
T 1bu8_A 99 EKVNCICVDWRRGSRTEYTQ-------ASYNTRVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHV 171 (452)
T ss_dssp CCEEEEEEECHHHHSSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCS
T ss_pred CCCEEEEEechhcccCchhH-------hHhhHHHHHHHHHHHHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhccccc
Confidence 38999999999999997431 1246778899999999888 43 78999999999999999999999999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
+++|+++++.
T Consensus 172 ~~iv~ldpa~ 181 (452)
T 1bu8_A 172 GRITGLDPAE 181 (452)
T ss_dssp SEEEEESCBC
T ss_pred ceEEEecCCc
Confidence 9999998753
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-12 Score=107.74 Aligned_cols=73 Identities=15% Similarity=0.159 Sum_probs=66.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||+|.|+ ++.+++++++.++++.++.++++||||||||.++..++..+|++|+++|++
T Consensus 38 ~G~~v~~~d~~g~g~s~------------~~~~~~~~~i~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i 105 (285)
T 1ex9_A 38 DGAQVYVTEVSQLDTSE------------VRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSV 105 (285)
T ss_dssp TTCCEEEECCCSSSCHH------------HHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEEeCCCCCCch------------hhHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEE
Confidence 46999999999999985 367899999999999998899999999999999999999999999999999
Q ss_pred ecchh
Q 024900 85 NISLR 89 (261)
Q Consensus 85 ~~~~~ 89 (261)
+++..
T Consensus 106 ~~p~~ 110 (285)
T 1ex9_A 106 GAPHK 110 (285)
T ss_dssp SCCTT
T ss_pred CCCCC
Confidence 98543
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.9e-13 Score=118.83 Aligned_cols=78 Identities=9% Similarity=0.014 Sum_probs=65.7
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChhHHHHHHHHhhCccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
.++|+|+++|+||||.|..+. ..++...+++++.++++.+ +.++++||||||||.||+.+|..+|++
T Consensus 97 ~~~~~VI~vD~~g~g~s~y~~-------~~~~~~~v~~~la~ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~ 169 (449)
T 1hpl_A 97 VESVNCICVDWKSGSRTAYSQ-------ASQNVRIVGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGA 169 (449)
T ss_dssp HCCEEEEEEECHHHHSSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTC
T ss_pred cCCeEEEEEeCCcccCCccHH-------HHHHHHHHHHHHHHHHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchh
Confidence 358999999999999986431 1246777888888888776 357999999999999999999999999
Q ss_pred ccceEEeecch
Q 024900 78 CRGMILLNISL 88 (261)
Q Consensus 78 v~~lv~~~~~~ 88 (261)
|++||++++..
T Consensus 170 v~~iv~Ldpa~ 180 (449)
T 1hpl_A 170 VGRITGLDPAE 180 (449)
T ss_dssp SSEEEEESCBC
T ss_pred cceeeccCccc
Confidence 99999999754
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-11 Score=113.22 Aligned_cols=190 Identities=18% Similarity=0.095 Sum_probs=108.1
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhhCccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDF-FDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~-~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
.++++|.|+++|+||+|.+.....+.. .......++++.+.+..+++. +. +++.++|+|+||.+++.++..+|++
T Consensus 504 la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~-~~~d~~rI~i~G~S~GG~la~~~a~~~pd~ 582 (711)
T 4hvt_A 504 WVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQ-NITSPEYLGIKGGSNGGLLVSVAMTQRPEL 582 (711)
T ss_dssp TGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHT-TSCCGGGEEEEEETHHHHHHHHHHHHCGGG
T ss_pred HHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHc-CCCCcccEEEEeECHHHHHHHHHHHhCcCc
Confidence 356899999999999998742110000 000011223333333333322 22 5799999999999999999999999
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
++++|...+..-+.. +. . ...+..+.. .+++. ..++....+
T Consensus 583 f~a~V~~~pv~D~~~----------~~-------~-~~~~~~~~~--------------~~G~p--~~~~~~~~l----- 623 (711)
T 4hvt_A 583 FGAVACEVPILDMIR----------YK-------E-FGAGHSWVT--------------EYGDP--EIPNDLLHI----- 623 (711)
T ss_dssp CSEEEEESCCCCTTT----------GG-------G-STTGGGGHH--------------HHCCT--TSHHHHHHH-----
T ss_pred eEEEEEeCCccchhh----------hh-------c-cccchHHHH--------------HhCCC--cCHHHHHHH-----
Confidence 999998776422110 00 0 000000000 01111 111111111
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCC--CEEEEecCCCCCCCchhhhh----h-ccCCCCccEEEcCCCCCCCCCC-
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKC--PVLIAWGDKDPWEPIELGRA----Y-GNFDSVEDFIVLPNVGHCPQDE- 229 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~--Pvlii~G~~D~~~~~~~~~~----~-~~~~~~~~~~~i~~~gH~~~~e- 229 (261)
..++ +...+.++++ |+|+++|++|..+|+..+.. + ++.....++.+++++||.....
T Consensus 624 -----------~~~S----P~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~ 688 (711)
T 4hvt_A 624 -----------KKYA----PLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDL 688 (711)
T ss_dssp -----------HHHC----GGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSH
T ss_pred -----------HHcC----HHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCc
Confidence 1111 1223566777 99999999999998876543 3 3333346899999999986532
Q ss_pred -ChhhHHHHHHHHHHhcC
Q 024900 230 -APHLVNPLVESFVTRHA 246 (261)
Q Consensus 230 -~p~~~~~~l~~fl~~~~ 246 (261)
+.......+.+||.++.
T Consensus 689 ~~~~~~~~~i~~FL~~~L 706 (711)
T 4hvt_A 689 KESANYFINLYTFFANAL 706 (711)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHh
Confidence 33455566778987754
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.28 E-value=6.4e-13 Score=116.64 Aligned_cols=76 Identities=13% Similarity=0.070 Sum_probs=64.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------cCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|+|+++|+||+|.|..+. ..++.+.+++++.++++.+ +.++++||||||||.||+.+|..+|+ |
T Consensus 99 ~~~~VI~vD~~g~g~s~y~~-------~~~~~~~~a~~l~~ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v 170 (450)
T 1rp1_A 99 EEVNCICVDWKKGSQTSYTQ-------AANNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-L 170 (450)
T ss_dssp CCEEEEEEECHHHHSSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-C
T ss_pred CCeEEEEEeCccccCCcchH-------HHHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-c
Confidence 37999999999999986331 2356788889999998877 36799999999999999999999999 9
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
.++|++++..
T Consensus 171 ~~iv~Ldpa~ 180 (450)
T 1rp1_A 171 GRITGLDPVE 180 (450)
T ss_dssp CEEEEESCCC
T ss_pred ccccccCccc
Confidence 9999999754
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.2e-12 Score=108.39 Aligned_cols=83 Identities=11% Similarity=0.079 Sum_probs=67.2
Q ss_pred CCCe---EEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC--ccccc
Q 024900 5 KSHR---VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME--PEICR 79 (261)
Q Consensus 5 ~~~~---V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~--p~~v~ 79 (261)
.+|+ |+++|++|+|.|+.+.... ...+..+++++++.++++.++.++++||||||||.+++.++..+ |++|+
T Consensus 80 ~Gy~~~~V~~~D~~g~G~S~~~~~~~---~~~~~~~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~ 156 (342)
T 2x5x_A 80 RGYNDCEIFGVTYLSSSEQGSAQYNY---HSSTKYAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVR 156 (342)
T ss_dssp TTCCTTSEEEECCSCHHHHTCGGGCC---BCHHHHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEE
T ss_pred CCCCCCeEEEEeCCCCCccCCccccC---CHHHHHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhc
Confidence 3676 9999999999986542100 12346777788888888888889999999999999999999998 99999
Q ss_pred ceEEeecchhh
Q 024900 80 GMILLNISLRM 90 (261)
Q Consensus 80 ~lv~~~~~~~~ 90 (261)
++|+++++...
T Consensus 157 ~lVlla~p~~G 167 (342)
T 2x5x_A 157 KFINLAGGIRG 167 (342)
T ss_dssp EEEEESCCTTC
T ss_pred EEEEECCCccc
Confidence 99999986543
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.4e-10 Score=96.06 Aligned_cols=128 Identities=21% Similarity=0.234 Sum_probs=85.3
Q ss_pred HHHHHHHHHH----hcC--CCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhh
Q 024900 40 ASQLNDFCKD----VVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN 113 (261)
Q Consensus 40 a~dl~~~~~~----l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (261)
++++.++++. .++ +++.|+|+|+||.+++.+++.+|++++++|.+++.+..
T Consensus 138 ~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~----------------------- 194 (285)
T 4fhz_A 138 ARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA----------------------- 194 (285)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC-----------------------
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC-----------------------
Confidence 4444444433 344 57999999999999999999999999999988753100
Q ss_pred hhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEec
Q 024900 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWG 193 (261)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G 193 (261)
+ +.+.. ....++|+++++|
T Consensus 195 -------------~-------------------~~~~~-----------------------------~~~~~~Pvl~~hG 213 (285)
T 4fhz_A 195 -------------P-------------------ERLAE-----------------------------EARSKPPVLLVHG 213 (285)
T ss_dssp -------------H-------------------HHHHH-----------------------------HCCCCCCEEEEEE
T ss_pred -------------c-------------------hhhhh-----------------------------hhhhcCcccceee
Confidence 0 00000 0113579999999
Q ss_pred CCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcCCCCCccccc
Q 024900 194 DKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHATPPASVSAA 255 (261)
Q Consensus 194 ~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~~~~~~~~~~ 255 (261)
++|.++|.+.++. +.+.....+++++++.||.. .++++. .+.+||+++++++...+-|
T Consensus 214 ~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i---~~~~l~-~~~~fL~~~Lpd~~gr~~a 275 (285)
T 4fhz_A 214 DADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGI---APDGLS-VALAFLKERLPDACGRTRA 275 (285)
T ss_dssp TTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSC---CHHHHH-HHHHHHHHHCC--------
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC---CHHHHH-HHHHHHHHHCcCCcccccc
Confidence 9999999987544 34444446889999999984 466665 5677999988776555444
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.20 E-value=3e-12 Score=112.23 Aligned_cols=76 Identities=9% Similarity=0.073 Sum_probs=65.1
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----c--CCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----V--KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~--~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|+|+++|+||||.|..+. ..++...+++|+.++++.+ + .++++|+||||||.+|+.+|..+|++|
T Consensus 99 ~~~~Vi~~D~~g~g~s~~~~-------~~~~~~~~~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v 171 (432)
T 1gpl_A 99 EKVNCICVDWKGGSKAQYSQ-------ASQNIRVVGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLV 171 (432)
T ss_dssp CCEEEEEEECHHHHTSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCS
T ss_pred CCcEEEEEECccccCccchh-------hHhhHHHHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhccccc
Confidence 48999999999999997431 1246778888998888877 3 578999999999999999999999999
Q ss_pred cceEEeecc
Q 024900 79 RGMILLNIS 87 (261)
Q Consensus 79 ~~lv~~~~~ 87 (261)
++++.+++.
T Consensus 172 ~~iv~l~pa 180 (432)
T 1gpl_A 172 GRITGLDPA 180 (432)
T ss_dssp SEEEEESCB
T ss_pred ceeEEeccc
Confidence 999999865
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-09 Score=91.92 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=56.4
Q ss_pred CeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCc---cc---cc
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEP---EI---CR 79 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p---~~---v~ 79 (261)
++|+++|+|| +. ..++++++++++.+.+..+. .++++++||||||.||+++|.+.+ +. |+
T Consensus 71 ~~v~~~~~~~----~~---------~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~ 137 (316)
T 2px6_A 71 IPTYGLQCTR----AA---------PLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 137 (316)
T ss_dssp SCEEEECCCT----TS---------CTTCHHHHHHHHHHHHTTTCSSCCCEEEEETHHHHHHHHHHHHHHHHC---CCCC
T ss_pred CCEEEEECCC----CC---------CcCCHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHHHHHHcCCcccccc
Confidence 8999999992 21 12589999999999998876 478999999999999999999765 45 89
Q ss_pred ceEEeecch
Q 024900 80 GMILLNISL 88 (261)
Q Consensus 80 ~lv~~~~~~ 88 (261)
+++++++.+
T Consensus 138 ~l~li~~~~ 146 (316)
T 2px6_A 138 SLFLFDGSP 146 (316)
T ss_dssp EEEEESCSS
T ss_pred eEEEEcCCc
Confidence 999998753
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.5e-10 Score=105.27 Aligned_cols=75 Identities=16% Similarity=-0.049 Sum_probs=60.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-----CCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-----~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
+.+|.|+++|.||+|.|+.... .+...++|+.++++.+. ..++.++||||||.+++.+|+.+|+.+
T Consensus 64 ~~Gy~vv~~D~RG~G~S~g~~~---------~~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l 134 (587)
T 3i2k_A 64 RDGYAVVIQDTRGLFASEGEFV---------PHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGL 134 (587)
T ss_dssp HTTCEEEEEECTTSTTCCSCCC---------TTTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTE
T ss_pred HCCCEEEEEcCCCCCCCCCccc---------cccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCcc
Confidence 4789999999999999985321 12345667777766654 247999999999999999999999999
Q ss_pred cceEEeecc
Q 024900 79 RGMILLNIS 87 (261)
Q Consensus 79 ~~lv~~~~~ 87 (261)
+++|.+++.
T Consensus 135 ~a~v~~~~~ 143 (587)
T 3i2k_A 135 KAIAPSMAS 143 (587)
T ss_dssp EEBCEESCC
T ss_pred EEEEEeCCc
Confidence 999999875
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=3e-10 Score=92.71 Aligned_cols=71 Identities=8% Similarity=0.039 Sum_probs=54.1
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHHH-hcC----CCeEEEEcChhHHHHHHHHhhCcc
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFET----WASQLNDFCKD-VVK----DQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~----~a~dl~~~~~~-l~~----~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
+|.|+++|.+|+|.+... .+.. .++++..++++ +.. +++.|+||||||.+++.++..+|+
T Consensus 100 ~~~vv~~d~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 168 (268)
T 1jjf_A 100 PLIIVTPNTNAAGPGIAD-----------GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLD 168 (268)
T ss_dssp CCEEEEECCCCCCTTCSC-----------HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTT
T ss_pred CEEEEEeCCCCCCccccc-----------cHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCch
Confidence 699999999998865211 1222 34555555553 333 579999999999999999999999
Q ss_pred cccceEEeecc
Q 024900 77 ICRGMILLNIS 87 (261)
Q Consensus 77 ~v~~lv~~~~~ 87 (261)
.+++++++++.
T Consensus 169 ~~~~~v~~s~~ 179 (268)
T 1jjf_A 169 KFAYIGPISAA 179 (268)
T ss_dssp TCSEEEEESCC
T ss_pred hhhheEEeCCC
Confidence 99999998874
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.3e-12 Score=113.85 Aligned_cols=86 Identities=12% Similarity=0.127 Sum_probs=61.9
Q ss_pred CCCeEEEecCCCCCCCCCCCCCC----------CC--CCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHH
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRD----------FF--DKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAA 71 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~----------~~--~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a 71 (261)
.+|+|+++|+||||.|..+..+. .. ....|+++++++|+.+++++++. ++++||||||||.+++.+|
T Consensus 90 ~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA 169 (431)
T 2hih_A 90 AGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLE 169 (431)
T ss_dssp TTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHH
Confidence 57999999999999985310000 00 00113444555666666777764 7999999999999999998
Q ss_pred hh--------------------------CcccccceEEeecchhh
Q 024900 72 VM--------------------------EPEICRGMILLNISLRM 90 (261)
Q Consensus 72 ~~--------------------------~p~~v~~lv~~~~~~~~ 90 (261)
.. +|++|++||+++++...
T Consensus 170 ~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~~G 214 (431)
T 2hih_A 170 HYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPHNG 214 (431)
T ss_dssp HHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCTTC
T ss_pred HHhccccccchhhccccccccccccccCcccceeEEEEECCCCCC
Confidence 76 78999999999986543
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-11 Score=108.10 Aligned_cols=55 Identities=16% Similarity=0.194 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCc---ccccceEEeecch
Q 024900 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP---EICRGMILLNISL 88 (261)
Q Consensus 34 ~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lv~~~~~~ 88 (261)
++.+++++++.+++++++.++++||||||||.+++.++..+| ++|+++|+++++.
T Consensus 109 ~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 109 ETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred hhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 346677778888888888899999999999999999999998 4999999999753
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.10 E-value=8.6e-10 Score=100.87 Aligned_cols=84 Identities=13% Similarity=-0.102 Sum_probs=59.2
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCC-CCCCCH--HHHHHHHHHHHHHhcC------CCeEEEEcChhHHHHHHHHhhC
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFD-KPFYTF--ETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~-~~~~~~--~~~a~dl~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+++|.|+++|.||+|.|..... .... ...|.. ...++|+.++++.+.. .++.++||||||.+++.+|..+
T Consensus 87 ~~Gy~Vv~~D~RG~g~S~g~~~-~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~ 165 (615)
T 1mpx_A 87 EGGYIRVFQDVRGKYGSEGDYV-MTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNP 165 (615)
T ss_dssp HTTCEEEEEECTTSTTCCSCCC-TTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSC
T ss_pred hCCeEEEEECCCCCCCCCCccc-cccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcC
Confidence 4689999999999999975321 1000 000110 0345666666655432 2899999999999999999989
Q ss_pred cccccceEEeecch
Q 024900 75 PEICRGMILLNISL 88 (261)
Q Consensus 75 p~~v~~lv~~~~~~ 88 (261)
|++++++|.+++..
T Consensus 166 ~~~l~a~v~~~~~~ 179 (615)
T 1mpx_A 166 HPALKVAVPESPMI 179 (615)
T ss_dssp CTTEEEEEEESCCC
T ss_pred CCceEEEEecCCcc
Confidence 99999999988753
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-09 Score=95.94 Aligned_cols=78 Identities=13% Similarity=-0.027 Sum_probs=50.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCeEEEEcChhHHHHHHHHhhCc----
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEP---- 75 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~p---- 75 (261)
|+++|.|+++|++|+|.+.... ...-....+.+.......+. .++.++|||+||..++.+|...|
T Consensus 152 l~~G~~Vv~~Dy~G~G~~y~~~--------~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yap 223 (462)
T 3guu_A 152 LQQGYYVVSSDHEGFKAAFIAG--------YEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAP 223 (462)
T ss_dssp HHTTCEEEEECTTTTTTCTTCH--------HHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCT
T ss_pred HhCCCEEEEecCCCCCCcccCC--------cchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcC
Confidence 6789999999999999753210 00111222333332222232 58999999999999988887654
Q ss_pred c-cccceEEeecch
Q 024900 76 E-ICRGMILLNISL 88 (261)
Q Consensus 76 ~-~v~~lv~~~~~~ 88 (261)
+ .+.+.+..+++.
T Consensus 224 el~~~g~~~~~~p~ 237 (462)
T 3guu_A 224 ELNIVGASHGGTPV 237 (462)
T ss_dssp TSEEEEEEEESCCC
T ss_pred ccceEEEEEecCCC
Confidence 3 477777777654
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.02 E-value=6e-10 Score=95.76 Aligned_cols=74 Identities=12% Similarity=0.085 Sum_probs=53.6
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH------------------------HHHHH-hcCCCeEEEE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN------------------------DFCKD-VVKDQAFFIC 59 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~------------------------~~~~~-l~~~~~~lvG 59 (261)
.+|+|+++|+||||.|... ..++.+.+. +++++ ++.++++|||
T Consensus 43 ~G~~Via~Dl~g~G~s~~~------------a~~l~~~i~~~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVG 110 (387)
T 2dsn_A 43 NGYRTYTLAVGPLSSNWDR------------ACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIA 110 (387)
T ss_dssp TTCCEEEECCCSSBCHHHH------------HHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEE
T ss_pred CCCEEEEecCCCCCCcccc------------HHHHHHHHHhhhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEE
Confidence 5799999999999988521 112222221 11122 4678999999
Q ss_pred cChhHHHHHHHHhh-------------------Cc------ccccceEEeecchhh
Q 024900 60 NSIGGLVGLQAAVM-------------------EP------EICRGMILLNISLRM 90 (261)
Q Consensus 60 hS~Gg~va~~~a~~-------------------~p------~~v~~lv~~~~~~~~ 90 (261)
|||||.++..++.. +| ++|++||+++++...
T Consensus 111 HSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~~G 166 (387)
T 2dsn_A 111 HSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPHDG 166 (387)
T ss_dssp ETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCTTC
T ss_pred ECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCCCC
Confidence 99999999999973 46 799999999986543
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.01 E-value=4.5e-09 Score=85.10 Aligned_cols=126 Identities=14% Similarity=0.226 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHh---c--CCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHH
Q 024900 36 FETWASQLNDFCKDV---V--KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNL 110 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l---~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (261)
+...++.|..+++.. + .++++++|.|+||.+++.+++.+|+.++++|.+++.+.. ..
T Consensus 110 i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~-------------~~----- 171 (246)
T 4f21_A 110 INSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPA-------------WD----- 171 (246)
T ss_dssp CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTT-------------HH-----
T ss_pred HHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCc-------------cc-----
Confidence 344455555555432 3 358999999999999999999999999999998863210 00
Q ss_pred hhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEE
Q 024900 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLI 190 (261)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 190 (261)
.+ .. .. .. ..-++|+++
T Consensus 172 --------~~------------------~~----------------------------------~~-~~--~~~~~Pvl~ 188 (246)
T 4f21_A 172 --------NF------------------KG----------------------------------KI-TS--INKGLPILV 188 (246)
T ss_dssp --------HH------------------ST----------------------------------TC-CG--GGTTCCEEE
T ss_pred --------cc------------------cc----------------------------------cc-cc--cccCCchhh
Confidence 00 00 00 00 012479999
Q ss_pred EecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcC
Q 024900 191 AWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 191 i~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~ 246 (261)
++|++|+++|.+.++. +++..-..++..+++.||.. .++++. .+.+||++..
T Consensus 189 ~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i---~~~~l~-~~~~fL~k~l 244 (246)
T 4f21_A 189 CHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSV---CMEEIK-DISNFIAKTF 244 (246)
T ss_dssp EEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSC---CHHHHH-HHHHHHHHHT
T ss_pred cccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcc---CHHHHH-HHHHHHHHHh
Confidence 9999999999986544 44443345888999999974 466665 5777998754
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=3.7e-09 Score=86.96 Aligned_cols=84 Identities=17% Similarity=0.015 Sum_probs=61.2
Q ss_pred CCCeEEEecCCCC-CCCCCCCCCCC-CCCCCCCHHHH-HHHHHHHHHH-hcCC--CeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGY-GYSDKPNPRDF-FDKPFYTFETW-ASQLNDFCKD-VVKD--QAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~-G~S~~~~~~~~-~~~~~~~~~~~-a~dl~~~~~~-l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.+|.|+++|.+|. +.++...+... .....+++.++ ++++..++++ +++. +++|+||||||.+|+.+|+++|+++
T Consensus 60 ~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~ 139 (280)
T 1dqz_A 60 SGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQF 139 (280)
T ss_dssp SSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTC
T ss_pred CCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchh
Confidence 4699999998754 33332111000 00013566665 5888888887 6764 8999999999999999999999999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
+++|++++..
T Consensus 140 ~~~v~~sg~~ 149 (280)
T 1dqz_A 140 PYAASLSGFL 149 (280)
T ss_dssp SEEEEESCCC
T ss_pred eEEEEecCcc
Confidence 9999998753
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.7e-08 Score=83.11 Aligned_cols=78 Identities=14% Similarity=0.039 Sum_probs=58.5
Q ss_pred CCCeEEEecCCCC-CCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHH-hcCC--CeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTF-ETWASQLNDFCKD-VVKD--QAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~-G~S~~~~~~~~~~~~~~~~-~~~a~dl~~~~~~-l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.++.|+++|.++. +.++...+ ....+ ..+++|+..++++ +++. ++.|+||||||.+|+.+|+++|++++
T Consensus 65 ~~~~vv~pd~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~ 138 (280)
T 1r88_A 65 KGISVVAPAGGAYSMYTNWEQD------GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFG 138 (280)
T ss_dssp SSSEEEEECCCTTSTTSBCSSC------TTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEE
T ss_pred CCeEEEEECCCCCCccCCCCCC------CCCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCcccee
Confidence 4689999999764 23221111 11134 3456788888887 6664 89999999999999999999999999
Q ss_pred ceEEeecch
Q 024900 80 GMILLNISL 88 (261)
Q Consensus 80 ~lv~~~~~~ 88 (261)
++|++++..
T Consensus 139 ~~v~~sg~~ 147 (280)
T 1r88_A 139 FAGSMSGFL 147 (280)
T ss_dssp EEEEESCCC
T ss_pred EEEEECCcc
Confidence 999998753
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.5e-08 Score=84.23 Aligned_cols=78 Identities=14% Similarity=0.131 Sum_probs=53.9
Q ss_pred CCCeEEEecCC------------CC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--cCCCeEEEEcChhHHHHH
Q 024900 5 KSHRVYSIDLI------------GY--GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGL 68 (261)
Q Consensus 5 ~~~~V~~~Dl~------------G~--G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l--~~~~~~lvGhS~Gg~va~ 68 (261)
.+|.|+++|+| |+ |.|..+.+. ....+.+..+.+..+.+.. ..++++|+||||||.+++
T Consensus 81 ~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~ 155 (304)
T 3d0k_A 81 HKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPRHV-----DGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVH 155 (304)
T ss_dssp HTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCBCCG-----GGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHH
T ss_pred CCcEEEEeCCccccCCCccccccCccccccCCCCcc-----cchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHH
Confidence 57999999999 66 777643210 1123344333333333322 246899999999999999
Q ss_pred HHHhhCcc-cccceEEeecc
Q 024900 69 QAAVMEPE-ICRGMILLNIS 87 (261)
Q Consensus 69 ~~a~~~p~-~v~~lv~~~~~ 87 (261)
.+|..+|+ +++++|+.+++
T Consensus 156 ~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 156 RLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp HHHHHSCSTTCSEEEEESCS
T ss_pred HHHHHCCCCceEEEEEecCc
Confidence 99999995 79999877753
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=98.72 E-value=5.1e-08 Score=81.21 Aligned_cols=84 Identities=18% Similarity=0.023 Sum_probs=59.9
Q ss_pred CCCeEEEecCCCC-CCCCCCCCCCCCC-CCCCCHHHH-HHHHHHHHHH-hcCC--CeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGY-GYSDKPNPRDFFD-KPFYTFETW-ASQLNDFCKD-VVKD--QAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~-G~S~~~~~~~~~~-~~~~~~~~~-a~dl~~~~~~-l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.++.|+++|.+|. +.++...+..... ...+++.++ ++++..++++ +++. ++.|+||||||.+++.+|+.+|+++
T Consensus 65 ~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~ 144 (304)
T 1sfr_A 65 SGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQF 144 (304)
T ss_dssp SSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred CCeEEEEECCCCCccccccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccce
Confidence 4689999998764 2332211100000 012466665 4788888877 5655 8999999999999999999999999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
+++|++++..
T Consensus 145 ~~~v~~sg~~ 154 (304)
T 1sfr_A 145 VYAGAMSGLL 154 (304)
T ss_dssp EEEEEESCCS
T ss_pred eEEEEECCcc
Confidence 9999998753
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=3.7e-08 Score=88.87 Aligned_cols=77 Identities=13% Similarity=-0.030 Sum_probs=60.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-----CCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
+.+|.|+++|.||+|.|+... ..+. ...++|+.+.++.+.. .++.++||||||.+++.+|+.+|+.+
T Consensus 115 ~~Gy~vv~~D~RG~G~S~G~~-------~~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l 186 (560)
T 3iii_A 115 PNDYVVVKVALRGSDKSKGVL-------SPWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHL 186 (560)
T ss_dssp GGTCEEEEEECTTSTTCCSCB-------CTTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTE
T ss_pred hCCCEEEEEcCCCCCCCCCcc-------ccCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCce
Confidence 468999999999999998531 1122 3456677777666542 47999999999999999999999999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
+++|..++..
T Consensus 187 ~aiv~~~~~~ 196 (560)
T 3iii_A 187 KAMIPWEGLN 196 (560)
T ss_dssp EEEEEESCCC
T ss_pred EEEEecCCcc
Confidence 9999887643
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=98.61 E-value=5.7e-08 Score=83.91 Aligned_cols=80 Identities=11% Similarity=0.040 Sum_probs=55.7
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHH---------------HHHHHHHHHhc------CCCeEEEEcCh
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA---------------SQLNDFCKDVV------KDQAFFICNSI 62 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a---------------~dl~~~~~~l~------~~~~~lvGhS~ 62 (261)
+.+|.|+++|+||||.|..+.... ....++...++ .|+...++.+. .+++.++||||
T Consensus 157 ~~G~~Vl~~D~rg~G~s~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~ 234 (391)
T 3g8y_A 157 KEGYVAVAVDNAAAGEASDLECYD--KGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSL 234 (391)
T ss_dssp TTTCEEEECCCTTSGGGCSSGGGT--TTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGG
T ss_pred HCCCEEEEecCCCccccCCccccc--ccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEECh
Confidence 468999999999999997542110 00113443433 56666666553 24689999999
Q ss_pred hHHHHHHHHhhCcccccceEEeec
Q 024900 63 GGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 63 Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
||.+++.+|+.. ++|+++|+.++
T Consensus 235 GG~~al~~a~~~-~~i~a~v~~~~ 257 (391)
T 3g8y_A 235 GTEPMMVLGVLD-KDIYAFVYNDF 257 (391)
T ss_dssp GHHHHHHHHHHC-TTCCEEEEESC
T ss_pred hHHHHHHHHHcC-CceeEEEEccC
Confidence 999999988754 57999887764
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=98.58 E-value=5.7e-08 Score=89.33 Aligned_cols=83 Identities=10% Similarity=-0.176 Sum_probs=58.8
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCC-CCCCCH--HHHHHHHHHHHHHhcC------CCeEEEEcChhHHHHHHHHhhC
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFD-KPFYTF--ETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~-~~~~~~--~~~a~dl~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+++|.|+++|.||+|.|..... .... ...|.- ...++|+.++++.+.. .++.++||||||.+++.+|..+
T Consensus 100 ~~GyaVv~~D~RG~g~S~g~~~-~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~ 178 (652)
T 2b9v_A 100 EGGYIRVFQDIRGKYGSQGDYV-MTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDP 178 (652)
T ss_dssp HTTCEEEEEECTTSTTCCSCCC-TTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSC
T ss_pred hCCCEEEEEecCcCCCCCCccc-ccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcC
Confidence 4789999999999999975321 0000 000110 1345666666655432 3799999999999999999989
Q ss_pred cccccceEEeecc
Q 024900 75 PEICRGMILLNIS 87 (261)
Q Consensus 75 p~~v~~lv~~~~~ 87 (261)
|++++++|.+++.
T Consensus 179 ~~~lka~v~~~~~ 191 (652)
T 2b9v_A 179 HPALKVAAPESPM 191 (652)
T ss_dssp CTTEEEEEEEEEC
T ss_pred CCceEEEEecccc
Confidence 9999999998864
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=3.9e-07 Score=76.32 Aligned_cols=35 Identities=14% Similarity=0.166 Sum_probs=31.7
Q ss_pred CCeEEEEcChhHHHHHHHHhhCccccc-ceEEeecc
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICR-GMILLNIS 87 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~-~lv~~~~~ 87 (261)
+++.|.|+|+||++++.+++.+|+.++ +++++++.
T Consensus 11 ~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~ 46 (318)
T 2d81_A 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGG 46 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCC
T ss_pred ceEEEEEECHHHHHHHHHHHHCchhhhccceEEecc
Confidence 589999999999999999999999999 88877753
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.41 E-value=4.5e-07 Score=78.44 Aligned_cols=80 Identities=9% Similarity=-0.030 Sum_probs=53.2
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCC---------------HHHHHHHHHHHHHHhc------CCCeEEEEcCh
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYT---------------FETWASQLNDFCKDVV------KDQAFFICNSI 62 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~---------------~~~~a~dl~~~~~~l~------~~~~~lvGhS~ 62 (261)
+.+|.|+++|+||||.|....... ....+. ....+.|+...++.+. .+++.++||||
T Consensus 162 ~~Gy~Vl~~D~rG~G~s~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~ 239 (398)
T 3nuz_A 162 KEGYIAVAVDNPAAGEASDLERYT--LGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSL 239 (398)
T ss_dssp TTTCEEEEECCTTSGGGCSSGGGT--TTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGG
T ss_pred HCCCEEEEecCCCCCccccccccc--cccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECH
Confidence 468999999999999996432000 000111 1122356666666553 24689999999
Q ss_pred hHHHHHHHHhhCcccccceEEeec
Q 024900 63 GGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 63 Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
||.+++.+|+.. ++|+++|.++.
T Consensus 240 GG~~a~~~aa~~-~~i~a~v~~~~ 262 (398)
T 3nuz_A 240 GTEPMMVLGTLD-TSIYAFVYNDF 262 (398)
T ss_dssp GHHHHHHHHHHC-TTCCEEEEESC
T ss_pred hHHHHHHHHhcC-CcEEEEEEecc
Confidence 999999888765 57888887653
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=1.9e-06 Score=71.48 Aligned_cols=71 Identities=13% Similarity=0.080 Sum_probs=53.6
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-cC--------------CCeEEEEcChhHHHHHHH
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VK--------------DQAFFICNSIGGLVGLQA 70 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-~~--------------~~~~lvGhS~Gg~va~~~ 70 (261)
+|.|+++|.+| .+... ..| ....++++..+++.. .. +++.|+|+||||.+++.+
T Consensus 107 ~~ivv~pd~~~--~~~~~--------~~~-~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~ 175 (297)
T 1gkl_A 107 PLIVVTPTFNG--GNCTA--------QNF-YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYV 175 (297)
T ss_dssp CEEEEECCSCS--TTCCT--------TTH-HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHH
T ss_pred CEEEEEecCcC--Cccch--------HHH-HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHH
Confidence 58999999875 33211 112 344567788777764 22 358999999999999999
Q ss_pred HhhCcccccceEEeecc
Q 024900 71 AVMEPEICRGMILLNIS 87 (261)
Q Consensus 71 a~~~p~~v~~lv~~~~~ 87 (261)
++.+|+++++++.+++.
T Consensus 176 a~~~p~~f~~~v~~sg~ 192 (297)
T 1gkl_A 176 MVNCLDYVAYFMPLSGD 192 (297)
T ss_dssp HHHHTTTCCEEEEESCC
T ss_pred HHhCchhhheeeEeccc
Confidence 99999999999999875
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.20 E-value=1e-05 Score=79.98 Aligned_cols=63 Identities=13% Similarity=-0.020 Sum_probs=43.8
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCCCCChh--hHHHHHHHHHHhcC
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPH--LVNPLVESFVTRHA 246 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~--~~~~~l~~fl~~~~ 246 (261)
..+++|+++++|++|.. +.+......+. ....+++.++| +|+.+++.|. ++++.|..+|....
T Consensus 1206 ~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~G-~H~~ml~~~~~~~~a~~l~~~L~~~~ 1271 (1304)
T 2vsq_A 1206 GQVKADIDLLTSGADFD-IPEWLASWEEATTGVYRMKRGFG-THAEMLQGETLDRNAEILLEFLNTQT 1271 (1304)
T ss_dssp -CBSSEEEEEECSSCCC-CCSSEECSSTTBSSCCCEEECSS-CTTGGGSHHHHHHHHHHHHHHHHCCC
T ss_pred CCcCCCEEEEEecCccc-cccchhhHHHHhCCCeEEEEeCC-CHHHHCCCHHHHHHHHHHHHHHhccc
Confidence 56889999999999873 22222223333 23457888875 9998887665 89999999997644
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00014 Score=61.18 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=30.6
Q ss_pred eEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 55 AFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 55 ~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
..|+||||||..++.++..+|+.+++++.+++.
T Consensus 139 r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~ 171 (331)
T 3gff_A 139 NVLVGHSFGGLVAMEALRTDRPLFSAYLALDTS 171 (331)
T ss_dssp EEEEEETHHHHHHHHHHHTTCSSCSEEEEESCC
T ss_pred eEEEEECHHHHHHHHHHHhCchhhheeeEeCch
Confidence 479999999999999999999999999999875
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=97.58 E-value=6.5e-05 Score=61.29 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=38.1
Q ss_pred HHHHHHHHHh-cC--CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 41 SQLNDFCKDV-VK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 41 ~dl~~~~~~l-~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+++..++++. .. +++.++||||||.+++.++..+|+.+++++++++.
T Consensus 137 ~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~ 186 (275)
T 2qm0_A 137 EELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPS 186 (275)
T ss_dssp HTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred HHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCce
Confidence 4555555543 23 57999999999999999999999999999988864
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.50 E-value=8.5e-05 Score=55.24 Aligned_cols=61 Identities=18% Similarity=0.240 Sum_probs=49.3
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccCC-----------------------CCccEEEcCCCCCCCCCCChhhHHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNFD-----------------------SVEDFIVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
.++|||..|+.|.+++....+. +.++. .+-++..+.+|||+.+.++|+....+++.
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 5799999999999998765443 33331 13567889999999999999999999999
Q ss_pred HHHhc
Q 024900 241 FVTRH 245 (261)
Q Consensus 241 fl~~~ 245 (261)
|+...
T Consensus 144 fl~~~ 148 (153)
T 1whs_B 144 FLQGK 148 (153)
T ss_dssp HHHTC
T ss_pred HHCCC
Confidence 99763
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00015 Score=62.78 Aligned_cols=74 Identities=22% Similarity=0.130 Sum_probs=51.8
Q ss_pred CeEEEecCCCC-CCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHh-c----CCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 7 HRVYSIDLIGY-GYSDKPNPRDFFDKPFYTF-ETWASQLNDFCKDV-V----KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 7 ~~V~~~Dl~G~-G~S~~~~~~~~~~~~~~~~-~~~a~dl~~~~~~l-~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
+.|+++|.+|+ +++.... ....+ +.+++++..++++. . .+++.|+||||||.+++.+++.+|++++
T Consensus 230 ~iVV~~d~~~~~~r~~~~~-------~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~ 302 (403)
T 3c8d_A 230 AVYVLIDAIDTTHRAHELP-------CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFG 302 (403)
T ss_dssp CEEEEECCCSHHHHHHHSS-------SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCC
T ss_pred eEEEEECCCCCccccccCC-------ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhc
Confidence 35999999874 2232110 00122 23346666666653 2 2479999999999999999999999999
Q ss_pred ceEEeecc
Q 024900 80 GMILLNIS 87 (261)
Q Consensus 80 ~lv~~~~~ 87 (261)
+++++++.
T Consensus 303 ~~~~~sg~ 310 (403)
T 3c8d_A 303 CVLSQSGS 310 (403)
T ss_dssp EEEEESCC
T ss_pred EEEEeccc
Confidence 99998875
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00048 Score=60.32 Aligned_cols=80 Identities=18% Similarity=0.060 Sum_probs=52.9
Q ss_pred CCCCeEEEecC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHH----HHHHH---hcCCCeEEEEcChhHHHHHHHHh---
Q 024900 4 AKSHRVYSIDL-IGYGYSDKPNPRDFFDKPFYTFETWASQLN----DFCKD---VVKDQAFFICNSIGGLVGLQAAV--- 72 (261)
Q Consensus 4 ~~~~~V~~~Dl-~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~----~~~~~---l~~~~~~lvGhS~Gg~va~~~a~--- 72 (261)
.+..+|+.+|+ +|.|.|..... . ...+-...++|+. ++++. +...+++|.|+|+||..+-.+|.
T Consensus 90 ~~~~~~lfiDqP~GtGfS~~~~~-~----~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~ 164 (452)
T 1ivy_A 90 NLIANVLYLESPAGVGFSYSDDK-F----YATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVM 164 (452)
T ss_dssp GGSSEEEEECCSTTSTTCEESSC-C----CCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHT
T ss_pred cccccEEEEecCCCCCcCCcCCC-C----CcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHH
Confidence 36789999996 79999963211 0 1113344455544 44443 23468999999999995555554
Q ss_pred -hCcccccceEEeecch
Q 024900 73 -MEPEICRGMILLNISL 88 (261)
Q Consensus 73 -~~p~~v~~lv~~~~~~ 88 (261)
..+-.++++++.++..
T Consensus 165 ~~~~~~l~g~~ign~~~ 181 (452)
T 1ivy_A 165 QDPSMNLQGLAVGNGLS 181 (452)
T ss_dssp TCTTSCEEEEEEESCCS
T ss_pred hcCccccceEEecCCcc
Confidence 3467799999998753
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0013 Score=52.88 Aligned_cols=81 Identities=16% Similarity=0.062 Sum_probs=57.4
Q ss_pred CCCCeEEEecC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhhC-
Q 024900 4 AKSHRVYSIDL-IGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVME- 74 (261)
Q Consensus 4 ~~~~~V~~~Dl-~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~~- 74 (261)
.+...|+.+|+ .|.|.|......+. ...+.+..++|+.++++.. ...+++|.|+|+||..+-.+|..-
T Consensus 91 ~~~anvlfiDqPvGtGfSy~~~~~~~---~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~ 167 (255)
T 1whs_A 91 NKVANVLFLDSPAGVGFSYTNTSSDI---YTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVH 167 (255)
T ss_dssp GGTSEEEEECCSTTSTTCEESSGGGG---GSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHH
T ss_pred cccCCEEEEecCCCCccCCCcCcccc---ccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHH
Confidence 35689999997 59999953221100 0246778888888877643 346799999999999888887632
Q ss_pred -----cccccceEEeecc
Q 024900 75 -----PEICRGMILLNIS 87 (261)
Q Consensus 75 -----p~~v~~lv~~~~~ 87 (261)
.-.++++++.++.
T Consensus 168 ~~n~~~inLkGi~ign~~ 185 (255)
T 1whs_A 168 RSKNPVINLKGFMVGNGL 185 (255)
T ss_dssp HHTCSSCEEEEEEEEEEC
T ss_pred HcCCcccccceEEecCCc
Confidence 2357888888864
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00045 Score=56.42 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=30.9
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
++..|.||||||.+++.+++. |+.+++++.+++.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 358999999999999999999 9999999988864
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00096 Score=54.32 Aligned_cols=40 Identities=23% Similarity=0.292 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhhCc
Q 024900 36 FETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
+..+.+|+.++++.+. ..+++++||||||.+|..+|....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 117 WRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEecCChHHHHHHHHHHHHH
Confidence 4456667776666542 347999999999999999999754
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0012 Score=53.72 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhhC
Q 024900 36 FETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 36 ~~~~a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+..+.+++.+.++.+. ..+++++||||||.+|..+|...
T Consensus 115 ~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 115 YGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 4555666665555442 23599999999999999999866
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0029 Score=55.73 Aligned_cols=82 Identities=13% Similarity=0.143 Sum_probs=63.8
Q ss_pred CeEEEecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHhcC------CCeEEEEcChhHHHHHHHHhhCccc
Q 024900 7 HRVYSIDLIGYGYSDKPNPRDFF---DKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 7 ~~V~~~Dl~G~G~S~~~~~~~~~---~~~~~~~~~~a~dl~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
--||+...|=||+|.... .... .....|.+...+|+..|++.+.. .+++++|-|+||++|.=+-.+||+.
T Consensus 74 a~~v~lEHRyYG~S~P~~-~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~l 152 (472)
T 4ebb_A 74 ALLVFAEHRYYGKSLPFG-AQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHL 152 (472)
T ss_dssp CEEEEECCTTSTTCCTTG-GGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTT
T ss_pred CeEEEEecccccCCcCCC-CCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCe
Confidence 458999999999996421 1001 12356888888999888877642 4799999999999999999999999
Q ss_pred ccceEEeecchh
Q 024900 78 CRGMILLNISLR 89 (261)
Q Consensus 78 v~~lv~~~~~~~ 89 (261)
|.+.+.-+++..
T Consensus 153 v~ga~ASSApv~ 164 (472)
T 4ebb_A 153 VAGALAASAPVL 164 (472)
T ss_dssp CSEEEEETCCTT
T ss_pred EEEEEecccceE
Confidence 999988776643
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00015 Score=75.75 Aligned_cols=53 Identities=15% Similarity=0.136 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCcc---ccc---ceEEeecc
Q 024900 35 TFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPE---ICR---GMILLNIS 87 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~---~v~---~lv~~~~~ 87 (261)
++++++++..+.+..+. .+++.++||||||.||+++|.+..+ .+. .++++|+.
T Consensus 2282 ~i~~la~~~~~~i~~~~p~gpy~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2282 SIQSLASYYIECIRQVQPEGPYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp ------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 56777777666666554 3589999999999999999975432 344 78888864
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0014 Score=53.38 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhC
Q 024900 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 37 ~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
..+.+++.+.++.+ ...+++++||||||.+|..+|+..
T Consensus 117 ~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 117 EQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 34455555555543 245899999999999999998865
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0014 Score=58.21 Aligned_cols=83 Identities=12% Similarity=-0.013 Sum_probs=52.5
Q ss_pred CCeEEEecCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcC--CCeEEEEcChhHHHHHHHHhhC--
Q 024900 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VVK--DQAFFICNSIGGLVGLQAAVME-- 74 (261)
Q Consensus 6 ~~~V~~~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~---l~~--~~~~lvGhS~Gg~va~~~a~~~-- 74 (261)
++-|+++|+| ||+.+.....+.......+.+.+....+.-+.+. +++ +++.|+|+|.||.++..++...
T Consensus 130 ~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~ 209 (498)
T 2ogt_A 130 DVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEA 209 (498)
T ss_dssp TCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGG
T ss_pred CEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccc
Confidence 4899999999 9998864211000000112344444333222222 233 5799999999999998888754
Q ss_pred cccccceEEeecch
Q 024900 75 PEICRGMILLNISL 88 (261)
Q Consensus 75 p~~v~~lv~~~~~~ 88 (261)
+..++++|+++++.
T Consensus 210 ~~lf~~~i~~sg~~ 223 (498)
T 2ogt_A 210 SGLFRRAMLQSGSG 223 (498)
T ss_dssp TTSCSEEEEESCCT
T ss_pred cchhheeeeccCCc
Confidence 45799999998754
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.002 Score=57.05 Aligned_cols=79 Identities=13% Similarity=0.085 Sum_probs=51.1
Q ss_pred CCeEEEecCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hcC--CCeEEEEcChhHHHHHHHHhhC-
Q 024900 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VVK--DQAFFICNSIGGLVGLQAAVME- 74 (261)
Q Consensus 6 ~~~V~~~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~----l~~--~~~~lvGhS~Gg~va~~~a~~~- 74 (261)
++-|+++|.| ||+.+...... ....+.+.+..+-+ +++.+ .++ +++.|+|||.||.++..++...
T Consensus 128 ~~vvv~~nYRlg~~Gf~~~~~~~~~---~~~n~gl~D~~~al-~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~ 203 (489)
T 1qe3_A 128 EVIVVTLNYRLGPFGFLHLSSFDEA---YSDNLGLLDQAAAL-KWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPA 203 (489)
T ss_dssp TCEEEEECCCCHHHHSCCCTTTCTT---SCSCHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGG
T ss_pred CEEEEecCccCcccccCcccccccc---CCCCcchHHHHHHH-HHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCcc
Confidence 4899999999 78776432100 01123344443332 33332 232 4799999999999998887753
Q ss_pred -cccccceEEeecch
Q 024900 75 -PEICRGMILLNISL 88 (261)
Q Consensus 75 -p~~v~~lv~~~~~~ 88 (261)
+++++++|++++..
T Consensus 204 ~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 204 AKGLFQKAIMESGAS 218 (489)
T ss_dssp GTTSCSEEEEESCCC
T ss_pred ccchHHHHHHhCCCC
Confidence 56799999988753
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.002 Score=52.69 Aligned_cols=39 Identities=21% Similarity=0.147 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhhCc
Q 024900 37 ETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 37 ~~~a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
..+.+++.+.++.+. ..+++++||||||.+|..+|+...
T Consensus 117 ~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 117 KLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 344455555555442 348999999999999999999754
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0025 Score=51.63 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhC
Q 024900 39 WASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 39 ~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
..+++.+.++.+ ...++++.||||||.+|..+|+..
T Consensus 107 ~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 146 (261)
T 1uwc_A 107 VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHH
Confidence 344444444443 345799999999999999998864
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0057 Score=49.96 Aligned_cols=42 Identities=19% Similarity=0.216 Sum_probs=28.3
Q ss_pred HHHHHhcCCCeEEEEcChhHHHHHHHHhhC----cccccceEEeec
Q 024900 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVME----PEICRGMILLNI 86 (261)
Q Consensus 45 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lv~~~~ 86 (261)
+++++....++++.|||+||.+|..+|+.. |.....++..++
T Consensus 130 ~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~ 175 (279)
T 3uue_A 130 KYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGL 175 (279)
T ss_dssp HHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESC
T ss_pred HHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence 334444456899999999999999988753 333344444443
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0056 Score=49.41 Aligned_cols=28 Identities=18% Similarity=0.049 Sum_probs=21.9
Q ss_pred HHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 47 CKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 47 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+++....++++.|||+||.+|..+|+..
T Consensus 118 ~~~~p~~~i~vtGHSLGGalA~l~a~~l 145 (258)
T 3g7n_A 118 IAKYPDYTLEAVGHSLGGALTSIAHVAL 145 (258)
T ss_dssp HHHSTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHhCCCCeEEEeccCHHHHHHHHHHHHH
Confidence 3333346899999999999999888753
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0034 Score=46.58 Aligned_cols=60 Identities=18% Similarity=0.243 Sum_probs=45.6
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC-C---------------------------CCccEEEcCCCCCCCCCCChhhHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF-D---------------------------SVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~-~---------------------------~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
.++|||..|+.|.+++.-..+. +.++ . .+-++..+.+|||+.+.++|+.-.
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 142 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 142 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHH
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHH
Confidence 5799999999999888654332 1111 0 012467889999999999999999
Q ss_pred HHHHHHHHh
Q 024900 236 PLVESFVTR 244 (261)
Q Consensus 236 ~~l~~fl~~ 244 (261)
.+++.||..
T Consensus 143 ~m~~~fl~g 151 (155)
T 4az3_B 143 TMFSRFLNK 151 (155)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999965
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0066 Score=50.15 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC
Q 024900 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 43 l~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+.+++++....++++.|||+||.+|..+|+..
T Consensus 144 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 144 LDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 33444433456899999999999999998864
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.0067 Score=50.47 Aligned_cols=23 Identities=22% Similarity=0.187 Sum_probs=20.0
Q ss_pred CCCeEEEEcChhHHHHHHHHhhC
Q 024900 52 KDQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
..++++.|||+||.+|..+|+..
T Consensus 135 ~~~i~vtGHSLGGAlA~L~a~~l 157 (319)
T 3ngm_A 135 SFKVVSVGHSLGGAVATLAGANL 157 (319)
T ss_dssp TCEEEEEEETHHHHHHHHHHHHH
T ss_pred CCceEEeecCHHHHHHHHHHHHH
Confidence 35799999999999999988853
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.0083 Score=53.92 Aligned_cols=79 Identities=13% Similarity=0.135 Sum_probs=51.8
Q ss_pred cCCCCeEEEecCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hcC--CCeEEEEcChhHHHHHHHHh
Q 024900 3 LAKSHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VVK--DQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 3 L~~~~~V~~~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~----l~~--~~~~lvGhS~Gg~va~~~a~ 72 (261)
.+.++-|+++|.| ||+.+..... ...+.+.+...-+ +++.+ +++ +++.|+|+|.||.++..++.
T Consensus 142 ~~~g~vvv~~nYRl~~~Gf~~~~~~~~-----~~n~gl~D~~~al-~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~ 215 (551)
T 2fj0_A 142 VSKDVIVITFNYRLNVYGFLSLNSTSV-----PGNAGLRDMVTLL-KWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSL 215 (551)
T ss_dssp GGGSCEEEEECCCCHHHHHCCCSSSSC-----CSCHHHHHHHHHH-HHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTT
T ss_pred HhCCeEEEEeCCcCCccccccCcccCC-----CCchhHHHHHHHH-HHHHHHHHHhCCChhhEEEEEEChHHhhhhcccc
Confidence 3467999999999 3444432110 0123455544333 33332 333 47999999999999999887
Q ss_pred h--CcccccceEEeecc
Q 024900 73 M--EPEICRGMILLNIS 87 (261)
Q Consensus 73 ~--~p~~v~~lv~~~~~ 87 (261)
. .+..++++|++++.
T Consensus 216 ~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 216 SKAADGLFRRAILMSGT 232 (551)
T ss_dssp CGGGTTSCSEEEEESCC
T ss_pred CchhhhhhhheeeecCC
Confidence 6 45679999999875
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.011 Score=44.02 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=46.5
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC-C-----------C--------------CccEEEcCCCCCCCCCCChhhHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF-D-----------S--------------VEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~-~-----------~--------------~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
.++|||..|+.|.+++.-..+. +.++ . . +-++..+.+|||+.+.++|+.-..+
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 5799999999999888754332 2211 0 0 1246788999999999999999999
Q ss_pred HHHHHHhc
Q 024900 238 VESFVTRH 245 (261)
Q Consensus 238 l~~fl~~~ 245 (261)
++.|+...
T Consensus 146 ~~~fl~g~ 153 (158)
T 1gxs_B 146 FKQFLKGE 153 (158)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 99999764
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.014 Score=52.32 Aligned_cols=78 Identities=12% Similarity=0.065 Sum_probs=52.2
Q ss_pred CCCeEEEecCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hcC--CCeEEEEcChhHHHHHHHHhh-
Q 024900 5 KSHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VVK--DQAFFICNSIGGLVGLQAAVM- 73 (261)
Q Consensus 5 ~~~~V~~~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~----l~~--~~~~lvGhS~Gg~va~~~a~~- 73 (261)
.++-|+++|.| ||+.+..... ...+.+.+...-+ +++++ .++ +++.|+|+|.||..+..++..
T Consensus 143 ~g~vvv~~nYRlg~~gf~~~~~~~~-----~~n~gl~D~~~al-~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~ 216 (542)
T 2h7c_A 143 ENVVVVTIQYRLGIWGFFSTGDEHS-----RGNWGHLDQVAAL-RWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSP 216 (542)
T ss_dssp HTCEEEEECCCCHHHHHCCCSSTTC-----CCCHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG
T ss_pred CCEEEEecCCCCccccCCCCCcccC-----ccchhHHHHHHHH-HHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhh
Confidence 47899999999 7776642210 1223344443332 33322 333 479999999999999988876
Q ss_pred -CcccccceEEeecch
Q 024900 74 -EPEICRGMILLNISL 88 (261)
Q Consensus 74 -~p~~v~~lv~~~~~~ 88 (261)
.+..++++|++++..
T Consensus 217 ~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 217 LAKNLFHRAISESGVA 232 (542)
T ss_dssp GGTTSCSEEEEESCCT
T ss_pred hhhHHHHHHhhhcCCc
Confidence 367899999998753
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=95.61 E-value=0.024 Score=46.71 Aligned_cols=53 Identities=11% Similarity=0.090 Sum_probs=36.5
Q ss_pred CCHHHH-HHHHHHHHHHh-c---------CCCeEEEEcChhHHHHHHHHhhC--cccccceEEeec
Q 024900 34 YTFETW-ASQLNDFCKDV-V---------KDQAFFICNSIGGLVGLQAAVME--PEICRGMILLNI 86 (261)
Q Consensus 34 ~~~~~~-a~dl~~~~~~l-~---------~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lv~~~~ 86 (261)
+.+.++ +++|..++++. . .++-.|.||||||+-|+.+|+++ |++..++...++
T Consensus 123 ~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~ 188 (299)
T 4fol_A 123 YQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAP 188 (299)
T ss_dssp CBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESC
T ss_pred ccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEeccc
Confidence 344444 67777776543 1 14578999999999999999996 555666555443
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.59 E-value=0.038 Score=48.73 Aligned_cols=84 Identities=17% Similarity=0.095 Sum_probs=56.0
Q ss_pred CCCCeEEEecC-CCCCCCCCCCCCC--C-CCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHh
Q 024900 4 AKSHRVYSIDL-IGYGYSDKPNPRD--F-FDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 4 ~~~~~V~~~Dl-~G~G~S~~~~~~~--~-~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~ 72 (261)
.+...|+.+|. .|.|.|....... . .....-+....++|+.+++... ...+++|.|+|+||..+-.+|.
T Consensus 108 ~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~ 187 (483)
T 1ac5_A 108 ISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFAN 187 (483)
T ss_dssp GGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHH
T ss_pred hhcCCeEEEecCCCccccCCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHH
Confidence 35688999997 6999996432110 0 0001125677888888877663 4568999999999998887775
Q ss_pred hC------------cccccceEEeecc
Q 024900 73 ME------------PEICRGMILLNIS 87 (261)
Q Consensus 73 ~~------------p~~v~~lv~~~~~ 87 (261)
.- +=.++|+.+-++.
T Consensus 188 ~i~~~n~~~~~~~~~inLkGi~IGNg~ 214 (483)
T 1ac5_A 188 AILNHNKFSKIDGDTYDLKALLIGNGW 214 (483)
T ss_dssp HHHHHHHHCCSTTSCCEEEEEEEEEEC
T ss_pred HHHHhcccccccCcccceeeeEecCCc
Confidence 21 1247788777753
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=95.57 E-value=0.016 Score=51.89 Aligned_cols=77 Identities=8% Similarity=-0.017 Sum_probs=50.5
Q ss_pred CCCeEEEecCC----CCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHH----hcC--CCeEEEEcChhHHHHHHHHhh
Q 024900 5 KSHRVYSIDLI----GYGYSD-KPNPRDFFDKPFYTFETWASQLNDFCKD----VVK--DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 5 ~~~~V~~~Dl~----G~G~S~-~~~~~~~~~~~~~~~~~~a~dl~~~~~~----l~~--~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.++-|+++|.| ||+.+. .+.. ...+.+.+...-+ +++++ +++ +++.|+|+|.||..+..++..
T Consensus 142 ~g~vvv~~nYRlg~~Gf~~~~~~~~~-----~~n~gl~D~~~al-~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~ 215 (543)
T 2ha2_A 142 EGAVLVSMNYRVGTFGFLALPGSREA-----PGNVGLLDQRLAL-QWVQENIAAFGGDPMSVTLFGESAGAASVGMHILS 215 (543)
T ss_dssp HCCEEEEECCCCHHHHHCCCTTCSSC-----CSCHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHS
T ss_pred CCEEEEEecccccccccccCCCCCCC-----CCcccHHHHHHHH-HHHHHHHHHhCCChhheEEEeechHHHHHHHHHhC
Confidence 47999999999 666652 1110 1123344444333 33332 333 479999999999998888775
Q ss_pred C--cccccceEEeecc
Q 024900 74 E--PEICRGMILLNIS 87 (261)
Q Consensus 74 ~--p~~v~~lv~~~~~ 87 (261)
. +.+++++|++++.
T Consensus 216 ~~~~~lf~~~i~~sg~ 231 (543)
T 2ha2_A 216 LPSRSLFHRAVLQSGT 231 (543)
T ss_dssp HHHHTTCSEEEEESCC
T ss_pred cccHHhHhhheeccCC
Confidence 3 5679999999874
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=95.44 E-value=0.026 Score=50.41 Aligned_cols=78 Identities=13% Similarity=0.056 Sum_probs=51.7
Q ss_pred CCCeEEEecCC----CCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hcC--CCeEEEEcChhHHHHHHHHhh
Q 024900 5 KSHRVYSIDLI----GYGYS-DKPNPRDFFDKPFYTFETWASQLNDFCKD----VVK--DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 5 ~~~~V~~~Dl~----G~G~S-~~~~~~~~~~~~~~~~~~~a~dl~~~~~~----l~~--~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.++-|++++.| ||+.+ ..+.. ...+.+.+...-+ +++++ +++ +++.|+|+|.||..+..++..
T Consensus 137 ~~~vvv~~nYRlg~~Gf~~~~~~~~~-----~~n~gl~D~~~al-~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~ 210 (529)
T 1p0i_A 137 ERVIVVSMNYRVGALGFLALPGNPEA-----PGNMGLFDQQLAL-QWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLS 210 (529)
T ss_dssp HCCEEEEECCCCHHHHHCCCTTCTTS-----CSCHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHC
T ss_pred CCeEEEEecccccccccccCCCCCCC-----cCcccHHHHHHHH-HHHHHHHHHhCCChhheEEeeccccHHHHHHHHhC
Confidence 46899999999 67666 22110 1123344544333 33332 343 479999999999999888875
Q ss_pred C--cccccceEEeecch
Q 024900 74 E--PEICRGMILLNISL 88 (261)
Q Consensus 74 ~--p~~v~~lv~~~~~~ 88 (261)
. +..++++|++++..
T Consensus 211 ~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 211 PGSHSLFTRAILQSGSF 227 (529)
T ss_dssp GGGGGGCSEEEEESCCT
T ss_pred ccchHHHHHHHHhcCcc
Confidence 4 56799999998753
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.014 Score=50.18 Aligned_cols=34 Identities=9% Similarity=-0.142 Sum_probs=30.0
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+++.+.|||+||..++.+|+..+ +|+.+|..++.
T Consensus 219 ~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg 252 (433)
T 4g4g_A 219 KRLGVTGCSRNGKGAFITGALVD-RIALTIPQESG 252 (433)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCC
T ss_pred hHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCC
Confidence 58999999999999999999885 89999887753
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=95.00 E-value=0.029 Score=50.19 Aligned_cols=78 Identities=13% Similarity=0.020 Sum_probs=51.1
Q ss_pred CCCeEEEecCC----CCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhcC--CCeEEEEcChhHHHHHHHHhh
Q 024900 5 KSHRVYSIDLI----GYGYS-DKPNPRDFFDKPFYTFETWASQLNDFCK----DVVK--DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 5 ~~~~V~~~Dl~----G~G~S-~~~~~~~~~~~~~~~~~~~a~dl~~~~~----~l~~--~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.++-|+++++| ||+.+ ..+.. ...+.+.+...-+ +++. .+++ +++.|+|+|.||..+..++..
T Consensus 139 ~~~vvv~~nYRlg~~Gf~~~~~~~~~-----~~n~gl~D~~~al-~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~ 212 (537)
T 1ea5_A 139 EEVVLVSLSYRVGAFGFLALHGSQEA-----PGNVGLLDQRMAL-QWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILS 212 (537)
T ss_dssp HTCEEEECCCCCHHHHHCCCTTCSSS-----CSCHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHC
T ss_pred CCEEEEEeccCccccccccCCCCCCC-----cCccccHHHHHHH-HHHHHHHHHhCCCccceEEEecccHHHHHHHHHhC
Confidence 57899999999 66655 22110 1223355544333 2332 2343 579999999999999888775
Q ss_pred --CcccccceEEeecch
Q 024900 74 --EPEICRGMILLNISL 88 (261)
Q Consensus 74 --~p~~v~~lv~~~~~~ 88 (261)
.+..++++|++++..
T Consensus 213 ~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 213 PGSRDLFRRAILQSGSP 229 (537)
T ss_dssp HHHHTTCSEEEEESCCT
T ss_pred ccchhhhhhheeccCCc
Confidence 246799999998753
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=94.58 E-value=0.036 Score=49.40 Aligned_cols=80 Identities=13% Similarity=-0.011 Sum_probs=49.4
Q ss_pred CCCCeEEEecCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhcC--CCeEEEEcChhHHHHHHHHhh
Q 024900 4 AKSHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK----DVVK--DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 4 ~~~~~V~~~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~----~l~~--~~~~lvGhS~Gg~va~~~a~~ 73 (261)
..++-|+++|.| ||+.++..... ....+.+.+...-+ +++. .+++ +++.|+|+|.||..+..+++.
T Consensus 131 ~~g~vvv~~nYRlg~~Gf~~~~~~~~~---~~~n~gl~D~~~al-~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~ 206 (522)
T 1ukc_A 131 DDVIVFVTFNYRVGALGFLASEKVRQN---GDLNAGLLDQRKAL-RWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSA 206 (522)
T ss_dssp TSCCEEEEECCCCHHHHHCCCHHHHHS---SCTTHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTG
T ss_pred CCcEEEEEecccccccccccchhcccc---CCCChhHHHHHHHH-HHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhC
Confidence 357999999999 77766421000 00123344444333 2332 2333 479999999999876666554
Q ss_pred C----cccccceEEeecc
Q 024900 74 E----PEICRGMILLNIS 87 (261)
Q Consensus 74 ~----p~~v~~lv~~~~~ 87 (261)
. +.+++++|+.++.
T Consensus 207 ~~~~~~~lf~~~i~~sg~ 224 (522)
T 1ukc_A 207 YGGKDEGLFIGAIVESSF 224 (522)
T ss_dssp GGTCCCSSCSEEEEESCC
T ss_pred CCccccccchhhhhcCCC
Confidence 3 5678999888864
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=94.36 E-value=0.018 Score=50.87 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=46.8
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC------------------------------------CCCccEEEcCCCCCCCC
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF------------------------------------DSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~------------------------------------~~~~~~~~i~~~gH~~~ 227 (261)
.++|||..|+.|.+++....+. +.++ ..+-++..+.+|||+.+
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 5899999999999988754332 1110 01125678899999999
Q ss_pred CCChhhHHHHHHHHHHhc
Q 024900 228 DEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 228 ~e~p~~~~~~l~~fl~~~ 245 (261)
.++|+.-..+++.||...
T Consensus 452 ~dqP~~al~m~~~fl~~~ 469 (483)
T 1ac5_A 452 FDKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp HHCHHHHHHHHHHHTTCC
T ss_pred chhHHHHHHHHHHHHCCc
Confidence 999999999999999754
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=94.16 E-value=0.27 Score=40.29 Aligned_cols=78 Identities=17% Similarity=0.080 Sum_probs=53.3
Q ss_pred CCCeEEEecCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh---
Q 024900 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (261)
Q Consensus 5 ~~~~V~~~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~--- 73 (261)
+...|+.+|.| |-|-|..... ....+..+.++|+..++... ...+++|.|-|+||.-+-.+|..
T Consensus 93 ~~an~lfiD~PvGtGfSy~~~~-----~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~ 167 (300)
T 4az3_A 93 LIANVLYLESPAGVGFSYSDDK-----FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQ 167 (300)
T ss_dssp GSSEEEEECCSTTSTTCEETTC-----CCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTT
T ss_pred hhhcchhhcCCCcccccccCCC-----cccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHh
Confidence 45789999977 8888853221 11235677788887776542 34579999999999988888763
Q ss_pred -CcccccceEEeecc
Q 024900 74 -EPEICRGMILLNIS 87 (261)
Q Consensus 74 -~p~~v~~lv~~~~~ 87 (261)
..=.++++++-++.
T Consensus 168 ~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 168 DPSMNLQGLAVGNGL 182 (300)
T ss_dssp CTTSCEEEEEEESCC
T ss_pred CCCcccccceecCCc
Confidence 12247777776653
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=93.70 E-value=0.087 Score=47.16 Aligned_cols=81 Identities=11% Similarity=0.047 Sum_probs=48.4
Q ss_pred CCCeEEEecCCC----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HhcC--CCeEEEEcChhHHHHHHHHhhC-
Q 024900 5 KSHRVYSIDLIG----YGYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DVVK--DQAFFICNSIGGLVGLQAAVME- 74 (261)
Q Consensus 5 ~~~~V~~~Dl~G----~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~---~l~~--~~~~lvGhS~Gg~va~~~a~~~- 74 (261)
.++-|+++|.|. |..+.....+ ....+.+.+...-+.-+.+ .+++ +++.|+|+|.||..+..+++..
T Consensus 155 ~~~vvv~~nYRl~~~gf~~~~~~~~~---~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~ 231 (544)
T 1thg_A 155 QPVVFVSINYRTGPFGFLGGDAITAE---GNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYG 231 (544)
T ss_dssp CCCEEEEECCCCHHHHHCCSHHHHHH---TCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGG
T ss_pred CCEEEEeCCCCCCcccCCCccccccc---CCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCC
Confidence 368999999994 3322100000 0012334454443322222 2333 5799999999999888777653
Q ss_pred -------cccccceEEeecch
Q 024900 75 -------PEICRGMILLNISL 88 (261)
Q Consensus 75 -------p~~v~~lv~~~~~~ 88 (261)
+..++++|++++..
T Consensus 232 ~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 232 GDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp TCCEETTEESCSEEEEESCCC
T ss_pred ccccccccccccceEEecccc
Confidence 56799999998743
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=93.55 E-value=0.13 Score=46.48 Aligned_cols=77 Identities=13% Similarity=0.036 Sum_probs=49.5
Q ss_pred CCeEEEecCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHhcC--CCeEEEEcChhHHHHHHHHhh--C
Q 024900 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDF---CKDVVK--DQAFFICNSIGGLVGLQAAVM--E 74 (261)
Q Consensus 6 ~~~V~~~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~---~~~l~~--~~~~lvGhS~Gg~va~~~a~~--~ 74 (261)
++-|+++++| ||+.+..... ...+.+.+...-+.-+ +..+++ +++.|+|+|.||..+..++.. .
T Consensus 135 ~vvvV~~nYRLg~~Gfl~~~~~~~-----pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~ 209 (579)
T 2bce_A 135 NVIVVTFNYRVGPLGFLSTGDSNL-----PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYN 209 (579)
T ss_dssp TCEEEEECCCCHHHHHCCCSSTTC-----CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGG
T ss_pred CEEEEEeCCccccccCCcCCCCCC-----CCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcch
Confidence 5889999999 7766532110 1223355554333222 223343 479999999999998888764 3
Q ss_pred cccccceEEeecc
Q 024900 75 PEICRGMILLNIS 87 (261)
Q Consensus 75 p~~v~~lv~~~~~ 87 (261)
...+++.|+.++.
T Consensus 210 ~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 210 KGLIKRAISQSGV 222 (579)
T ss_dssp TTTCSEEEEESCC
T ss_pred hhHHHHHHHhcCC
Confidence 4578888888764
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=93.25 E-value=0.15 Score=43.04 Aligned_cols=51 Identities=12% Similarity=0.028 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHHhc------C--CCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 35 TFETWASQLNDFCKDVV------K--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 35 ~~~~~a~dl~~~~~~l~------~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
++..|+=++...++.|. + +++.+.|||+||..++.+|+..+ +|+.+|..++
T Consensus 159 al~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~ 217 (375)
T 3pic_A 159 AMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQES 217 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccC
Confidence 34455445555554442 2 47999999999999999999885 8999988775
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=93.07 E-value=0.13 Score=45.98 Aligned_cols=80 Identities=9% Similarity=-0.010 Sum_probs=46.9
Q ss_pred CCCeEEEecCCC----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHhcC--CCeEEEEcChhHHHHHHHHhhC-
Q 024900 5 KSHRVYSIDLIG----YGYSDKPNPRDFFDKPFYTFETWASQLNDF---CKDVVK--DQAFFICNSIGGLVGLQAAVME- 74 (261)
Q Consensus 5 ~~~~V~~~Dl~G----~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~---~~~l~~--~~~~lvGhS~Gg~va~~~a~~~- 74 (261)
.++-|+++|.|. |..+.....+ ....+.+.|...-+.-+ +..+++ +++.|+|+|.||..+..+.+..
T Consensus 147 ~~~vvv~~nYRl~~~gf~~~~~~~~~---~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~ 223 (534)
T 1llf_A 147 KPIIHVAVNYRVASWGFLAGDDIKAE---GSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWND 223 (534)
T ss_dssp CCCEEEEECCCCHHHHHCCSHHHHHH---TCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGG
T ss_pred CCEEEEEeCCCCCCCCCCCccccccc---CCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCC
Confidence 469999999993 3322100000 00123344444333222 222333 5799999999998776665543
Q ss_pred -------cccccceEEeecc
Q 024900 75 -------PEICRGMILLNIS 87 (261)
Q Consensus 75 -------p~~v~~lv~~~~~ 87 (261)
+.+++++|++++.
T Consensus 224 ~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 224 GDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp GCCEETTEESCSEEEEESCC
T ss_pred ccccccccchhHhHhhhccC
Confidence 6678999999874
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=92.99 E-value=0.071 Score=44.84 Aligned_cols=22 Identities=18% Similarity=0.149 Sum_probs=19.6
Q ss_pred CCeEEEEcChhHHHHHHHHhhC
Q 024900 53 DQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
.++++.|||+||.+|..+|+..
T Consensus 166 ~~i~vtGHSLGGAlA~l~a~~l 187 (346)
T 2ory_A 166 AKICVTGHSKGGALSSTLALWL 187 (346)
T ss_dssp EEEEEEEETHHHHHHHHHHHHH
T ss_pred ceEEEecCChHHHHHHHHHHHH
Confidence 5799999999999999998853
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=92.56 E-value=0.088 Score=45.50 Aligned_cols=77 Identities=13% Similarity=0.004 Sum_probs=52.4
Q ss_pred CCCeEEEecC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cC--CCeEEEEcChhHHHHHHHHhhC
Q 024900 5 KSHRVYSIDL-IGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VK--DQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 5 ~~~~V~~~Dl-~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~--~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
+...|+.+|. .|.|.|..... ...+....++|+.++++.. .. .+++|.|.|+||..+-.+|..-
T Consensus 86 ~~an~lfiDqPvGtGfSy~~~~------~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i 159 (421)
T 1cpy_A 86 SNATVIFLDQPVNVGFSYSGSS------GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEI 159 (421)
T ss_dssp GGSEEECCCCSTTSTTCEESSC------CCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHH
T ss_pred cccCEEEecCCCcccccCCCCC------CCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHH
Confidence 4578999994 69999853221 1234556677777766543 23 5899999999999888887631
Q ss_pred ------cccccceEEeecc
Q 024900 75 ------PEICRGMILLNIS 87 (261)
Q Consensus 75 ------p~~v~~lv~~~~~ 87 (261)
.=.++|+.+-++.
T Consensus 160 ~~~n~~~inLkGi~IGNg~ 178 (421)
T 1cpy_A 160 LSHKDRNFNLTSVLIGNGL 178 (421)
T ss_dssp TTCSSCSSCCCEEEEESCC
T ss_pred HhccccccceeeEEecCcc
Confidence 1247888776653
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=92.54 E-value=0.19 Score=45.36 Aligned_cols=77 Identities=10% Similarity=-0.007 Sum_probs=48.9
Q ss_pred CCeEEEecCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HhcC--CCeEEEEcChhHHHHHHHHhhCc-
Q 024900 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DVVK--DQAFFICNSIGGLVGLQAAVMEP- 75 (261)
Q Consensus 6 ~~~V~~~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~---~l~~--~~~~lvGhS~Gg~va~~~a~~~p- 75 (261)
++-|+++|+| ||..+..... ...+.+.+...-+.-+.+ .+++ +++.|+|+|.||..+..++....
T Consensus 160 ~~vvv~~~YRl~~~Gfl~~~~~~~-----~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~ 234 (574)
T 3bix_A 160 NVIVITVNYRLGVLGFLSTGDQAA-----KGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYS 234 (574)
T ss_dssp TCEEEEECCCCHHHHHCCCSSSSC-----CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTS
T ss_pred CEEEEEeCCcCcccccCcCCCCCC-----CCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCc
Confidence 5889999999 5655532110 012345555443332222 2343 47999999999999998887653
Q ss_pred --ccccceEEeecc
Q 024900 76 --EICRGMILLNIS 87 (261)
Q Consensus 76 --~~v~~lv~~~~~ 87 (261)
..++++|+.++.
T Consensus 235 ~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 235 EKGLFQRAIAQSGT 248 (574)
T ss_dssp CTTSCCEEEEESCC
T ss_pred chhHHHHHHHhcCC
Confidence 457888888753
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=92.36 E-value=0.083 Score=46.12 Aligned_cols=60 Identities=18% Similarity=0.251 Sum_probs=46.1
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccCC----------------------------CCccEEEcCCCCCCCCCCChhhHH
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNFD----------------------------SVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~~----------------------------~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
.++|||..|+.|.+++....+. +.++. .+-++..+.+|||+.+.++|+.-.
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al 440 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHH
Confidence 5899999999999988754332 11110 012467889999999999999999
Q ss_pred HHHHHHHHh
Q 024900 236 PLVESFVTR 244 (261)
Q Consensus 236 ~~l~~fl~~ 244 (261)
.+++.|+..
T Consensus 441 ~m~~~fl~g 449 (452)
T 1ivy_A 441 TMFSRFLNK 449 (452)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999999964
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=92.23 E-value=0.24 Score=42.78 Aligned_cols=60 Identities=20% Similarity=0.206 Sum_probs=45.8
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC-----------------C-------------CCccEEEcCCCCCCCCCCChhh
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF-----------------D-------------SVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~-----------------~-------------~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
.++|||..|+.|.+++....+. +.++ . .+-++..+.+|||+.+.++|+.
T Consensus 327 girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~ 406 (421)
T 1cpy_A 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPEN 406 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTCCSSHHHHCHHH
T ss_pred CCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCCcccCcccCHHH
Confidence 5899999999999988754321 1111 0 0124678899999999999999
Q ss_pred HHHHHHHHHHh
Q 024900 234 VNPLVESFVTR 244 (261)
Q Consensus 234 ~~~~l~~fl~~ 244 (261)
-..+++.||..
T Consensus 407 al~m~~~fl~g 417 (421)
T 1cpy_A 407 ALSMVNEWIHG 417 (421)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999964
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=91.11 E-value=0.03 Score=48.08 Aligned_cols=22 Identities=14% Similarity=0.025 Sum_probs=19.3
Q ss_pred CCeEEEEcChhHHHHHHHHhhC
Q 024900 53 DQAFFICNSIGGLVGLQAAVME 74 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~ 74 (261)
.++++.|||+||.+|..+|...
T Consensus 228 ~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 228 VSITICGHSLGAALATLSATDI 249 (419)
Confidence 4699999999999999998754
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=91.68 E-value=0.47 Score=38.30 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=48.0
Q ss_pred CCCeEEEecC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh--C
Q 024900 5 KSHRVYSIDL-IGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--E 74 (261)
Q Consensus 5 ~~~~V~~~Dl-~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~--~ 74 (261)
+...|+.+|. .|.|.|....... ...+-...++|+.++++.. ...+++|.|.| |-++..-.... .
T Consensus 98 ~~anllfiDqPvGtGfSy~~~~~~----~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~ 172 (270)
T 1gxs_A 98 KAANILFAESPAGVGFSYSNTSSD----LSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRN 172 (270)
T ss_dssp GTSEEEEECCSTTSTTCEESSGGG----GCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHT
T ss_pred ccccEEEEeccccccccCCCCCcc----ccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhc
Confidence 5678999995 6999995322111 0124456677777666543 33579999999 65544333322 1
Q ss_pred c-----ccccceEEeecc
Q 024900 75 P-----EICRGMILLNIS 87 (261)
Q Consensus 75 p-----~~v~~lv~~~~~ 87 (261)
. =.++|+++.++.
T Consensus 173 n~~~~~inLkGi~ign~~ 190 (270)
T 1gxs_A 173 RNNSPFINFQGLLVSSGL 190 (270)
T ss_dssp TTTCTTCEEEEEEEESCC
T ss_pred cccccceeeeeEEEeCCc
Confidence 1 247888887764
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=91.45 E-value=0.47 Score=36.36 Aligned_cols=48 Identities=6% Similarity=0.036 Sum_probs=35.2
Q ss_pred HHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCc----ccccceEEeecc
Q 024900 40 ASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEP----EICRGMILLNIS 87 (261)
Q Consensus 40 a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p----~~v~~lv~~~~~ 87 (261)
++++...+... -..+++|+|.|-|+.|+-..+..-| ++|.++|+++-+
T Consensus 80 ~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 135 (197)
T 3qpa_A 80 IREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYT 135 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCC
Confidence 34444444433 3468999999999999988776554 689999998754
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=91.05 E-value=0.3 Score=44.07 Aligned_cols=82 Identities=11% Similarity=-0.040 Sum_probs=48.4
Q ss_pred CCCeEEEecCC----CCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHH----hcC--CCeEEEEcChhHHHHHHHHh
Q 024900 5 KSHRVYSIDLI----GYGYSDKPNPR--DFFDKPFYTFETWASQLNDFCKD----VVK--DQAFFICNSIGGLVGLQAAV 72 (261)
Q Consensus 5 ~~~~V~~~Dl~----G~G~S~~~~~~--~~~~~~~~~~~~~a~dl~~~~~~----l~~--~~~~lvGhS~Gg~va~~~a~ 72 (261)
.++-|+++|+| ||+....-... .......+.+.+...-+ +++++ ++. +++.|+|+|.||..+..+++
T Consensus 171 ~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al-~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~ 249 (585)
T 1dx4_A 171 GNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI-RWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLM 249 (585)
T ss_dssp HTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH-HHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred CCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHH-HHHHHHHHHhCCCcceeEEeecchHHHHHHHHHh
Confidence 46889999999 66554110000 00001123344443332 33332 333 47999999999998877776
Q ss_pred hC--cccccceEEeecc
Q 024900 73 ME--PEICRGMILLNIS 87 (261)
Q Consensus 73 ~~--p~~v~~lv~~~~~ 87 (261)
.. +..+++.|+.++.
T Consensus 250 ~~~~~~lf~~ai~~Sg~ 266 (585)
T 1dx4_A 250 SPVTRGLVKRGMMQSGT 266 (585)
T ss_dssp CTTTTTSCCEEEEESCC
T ss_pred CCcccchhHhhhhhccc
Confidence 42 4678888988864
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=90.28 E-value=0.57 Score=36.21 Aligned_cols=48 Identities=10% Similarity=0.095 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhh--------------Cc----ccccceEEeecc
Q 024900 40 ASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVM--------------EP----EICRGMILLNIS 87 (261)
Q Consensus 40 a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~--------------~p----~~v~~lv~~~~~ 87 (261)
++++...++... ..+++|+|+|-|+.|+-.+... .| ++|.++++++-+
T Consensus 65 ~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1g66_A 65 IAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCC
Confidence 444544444432 4689999999999999887641 12 578888887754
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=89.82 E-value=0.4 Score=38.78 Aligned_cols=43 Identities=23% Similarity=0.189 Sum_probs=28.0
Q ss_pred CCCCEEEEecCCCCCCC--c---------------hhh----hhhc----cCC--CCccEEEcCCCCCCC
Q 024900 184 VKCPVLIAWGDKDPWEP--I---------------ELG----RAYG----NFD--SVEDFIVLPNVGHCP 226 (261)
Q Consensus 184 i~~Pvlii~G~~D~~~~--~---------------~~~----~~~~----~~~--~~~~~~~i~~~gH~~ 226 (261)
+++|+++++|++|..+. . +.+ +.+. +.. .+.+++++|++||..
T Consensus 204 ~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~ 273 (304)
T 3d0k_A 204 LAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDG 273 (304)
T ss_dssp HHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHHHHHHHHHHHHHHHHTCCCCCEEEEETTCCSCH
T ss_pred hcCCEEEEEeCCCCCccccccccChhhhccCccHHHHHHHHHHHHHHHHHhcCCCcceEEEEeCCCCCch
Confidence 46899999999998641 0 111 1111 122 247899999999995
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=89.62 E-value=0.54 Score=36.33 Aligned_cols=48 Identities=10% Similarity=0.031 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhh--------------Cc----ccccceEEeecc
Q 024900 40 ASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVM--------------EP----EICRGMILLNIS 87 (261)
Q Consensus 40 a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~--------------~p----~~v~~lv~~~~~ 87 (261)
++++...+.... ..+++|+|+|-|+.|+-..... .| ++|.++++++-+
T Consensus 65 ~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1qoz_A 65 TNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCC
Confidence 444444444432 4689999999999999887741 12 568888888754
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=89.19 E-value=0.7 Score=35.47 Aligned_cols=48 Identities=10% Similarity=0.002 Sum_probs=34.8
Q ss_pred HHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCc----ccccceEEeecc
Q 024900 40 ASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEP----EICRGMILLNIS 87 (261)
Q Consensus 40 a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p----~~v~~lv~~~~~ 87 (261)
++++...+... -..+++|+|.|-|+.|+-.++..-| ++|.++|+++-+
T Consensus 88 ~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 143 (201)
T 3dcn_A 88 INEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYT 143 (201)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCc
Confidence 34444444333 3468999999999999988776544 688999988754
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=88.18 E-value=1.2 Score=35.54 Aligned_cols=51 Identities=12% Similarity=-0.094 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhh-----------CcccccceEEeecch
Q 024900 38 TWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVM-----------EPEICRGMILLNISL 88 (261)
Q Consensus 38 ~~a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~-----------~p~~v~~lv~~~~~~ 88 (261)
+=++++...++... ..+++|+|.|-|+.|+-.+... ..++|.++|+++-+.
T Consensus 55 ~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~ 120 (254)
T 3hc7_A 55 KGVAELILQIELKLDADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPM 120 (254)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTT
T ss_pred HHHHHHHHHHHHHHhhCCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCC
Confidence 33445555444432 3689999999999999887754 346899999997543
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=85.85 E-value=1.6 Score=33.09 Aligned_cols=36 Identities=19% Similarity=0.088 Sum_probs=29.9
Q ss_pred CCCeEEEEcChhHHHHHHHHhhCc----ccccceEEeecc
Q 024900 52 KDQAFFICNSIGGLVGLQAAVMEP----EICRGMILLNIS 87 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~~p----~~v~~lv~~~~~ 87 (261)
..+++|+|.|-|+.|+-.+...-| ++|.++++++-+
T Consensus 92 ~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 131 (187)
T 3qpd_A 92 DTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYT 131 (187)
T ss_dssp TCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCT
T ss_pred CCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCC
Confidence 468999999999999988876544 689999998754
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=84.50 E-value=1.5 Score=33.80 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhhC------cccccceEEeecc
Q 024900 38 TWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVME------PEICRGMILLNIS 87 (261)
Q Consensus 38 ~~a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~~------p~~v~~lv~~~~~ 87 (261)
.=++++...++... ..+++|+|.|-|+.|+-.++..- .++|.++|+++-+
T Consensus 58 ~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 58 AGTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 34455555555442 46899999999999988876533 3579999988743
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=82.99 E-value=0.51 Score=38.44 Aligned_cols=61 Identities=13% Similarity=-0.025 Sum_probs=34.6
Q ss_pred CCCEEEEecCCCC--------------CCCchhhhh----hccCC-CCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 185 KCPVLIAWGDKDP--------------WEPIELGRA----YGNFD-SVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 185 ~~Pvlii~G~~D~--------------~~~~~~~~~----~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
++|+++++|++|. .++.+..+. +.+.. -..++.++++++|.... -.+.+.+ +..|+.+.
T Consensus 205 ~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~~-w~~~l~~-~l~~l~~~ 282 (304)
T 1sfr_A 205 NTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWEY-WGAQLNA-MKPDLQRA 282 (304)
T ss_dssp TCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHHH-HHHHHHH-THHHHHHH
T ss_pred CCeEEEEecCCCCccccccccccchhHHHHHHHHHHHHHHHHhCCCCceEEEecCCCccCHHH-HHHHHHH-HHHHHHHh
Confidence 5899999999997 334443332 33333 34677777777996321 1233333 34466554
Q ss_pred CC
Q 024900 246 AT 247 (261)
Q Consensus 246 ~~ 247 (261)
..
T Consensus 283 l~ 284 (304)
T 1sfr_A 283 LG 284 (304)
T ss_dssp HT
T ss_pred cC
Confidence 33
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=81.58 E-value=2.8 Score=34.28 Aligned_cols=48 Identities=13% Similarity=0.081 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhc----CCCeEEEEcChhHHHHHHHHhh--------CcccccceEEeecc
Q 024900 40 ASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVM--------EPEICRGMILLNIS 87 (261)
Q Consensus 40 a~dl~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~--------~p~~v~~lv~~~~~ 87 (261)
++++...+.... ..+++|+|.|-|+.|+-.++.. .+++|.++|+++-+
T Consensus 116 ~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP 175 (302)
T 3aja_A 116 MRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADG 175 (302)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCT
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCC
Confidence 444444444432 4689999999999999887742 45789999998754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 261 | ||||
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 3e-17 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 4e-15 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 5e-15 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 6e-15 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 1e-14 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 1e-14 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 9e-14 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 9e-14 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 2e-13 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 5e-13 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 1e-12 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 2e-12 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 9e-12 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 5e-11 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 5e-11 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 5e-11 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 1e-10 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 2e-10 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 1e-09 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 1e-09 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 2e-09 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 3e-09 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 3e-09 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 5e-09 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 8e-09 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 4e-08 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 6e-08 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 3e-07 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 3e-06 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 3e-05 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 2e-04 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 6e-04 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 0.002 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 0.004 |
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.1 bits (188), Expect = 3e-17
Identities = 26/255 (10%), Positives = 60/255 (23%), Gaps = 36/255 (14%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
V +DL S +P + + + + IC S GGLV
Sbjct: 32 TVVTVLDLFDGRESLRP--------LWEQVQGFREAVVPIMAKA-PQGVHLICYSQGGLV 82
Query: 67 GLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVAT 126
+ + + S P G+ + L T+ Y++ +
Sbjct: 83 CRALLSVMDDHNVDSFISLSS---------PQMGQYGDTDYLKWLFPTSMRSNLYRICYS 133
Query: 127 SESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP--------- 177
+C ++D L + + +
Sbjct: 134 PWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVGHLVLIGGPD 193
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYG---------NFDSVEDFIVLPNVGHCPQD 228
+ ++ + + + +E Y + + H
Sbjct: 194 DGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWH 253
Query: 229 EAPHLVNPLVESFVT 243
L +E +++
Sbjct: 254 SNRTLYETCIEPWLS 268
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 71.0 bits (172), Expect = 4e-15
Identities = 39/242 (16%), Positives = 81/242 (33%), Gaps = 22/242 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ +RV ++D++G+G + KP+ D+ + +N K + + NS+
Sbjct: 48 LARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAMNFDGKVSI------VGNSM 101
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG GL +V+ E+ ++L+ + ++ I + +
Sbjct: 102 GGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPII----------------NYDFT 145
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
V+ + + + G E +
Sbjct: 146 REGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIR 205
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242
+V+ P L+ G D P+E + + ++P+ GH E P SF+
Sbjct: 206 KVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFL 265
Query: 243 TR 244
+
Sbjct: 266 SL 267
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 70.7 bits (171), Expect = 5e-15
Identities = 28/244 (11%), Positives = 64/244 (26%), Gaps = 15/244 (6%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
A H+V ++DL G + ++ ++ + ++ + +S+G
Sbjct: 27 AAGHKVTALDLAASGTDLRKI-----EELRTLYDYTLPLMELMESLSADEKVILVGHSLG 81
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM 123
G+ A P+ + L + P + T A
Sbjct: 82 GMNLGLAMEKYPQKIYAAVFLAAFM--------PDSVHNSSFVLEQYNERTPAENWLDTQ 133
Query: 124 VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE--ELL 181
S L + + +L + L ++ V + +
Sbjct: 134 FLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDE 193
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
+ +D P E R + V + I + H P + +
Sbjct: 194 RFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLLEI 253
Query: 242 VTRH 245
++
Sbjct: 254 AHKY 257
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 70.3 bits (170), Expect = 6e-15
Identities = 29/243 (11%), Positives = 57/243 (23%), Gaps = 15/243 (6%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFIC-NSI 62
A H+V ++DL G + +F+ ++ L F + + + + S
Sbjct: 27 ALGHKVTALDLAASGVDPRQIEEI------GSFDEYSEPLLTFLEALPPGEKVILVGESC 80
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GGL AA E + N L + + K
Sbjct: 81 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGK 140
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ + +L + E L F
Sbjct: 141 EITGLKLGFTLLRENLYTLCGPEEY--------ELAKMLTRKGSLFQNILAKRPFFTKEG 192
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242
+ W D+D E + + H Q + +++
Sbjct: 193 YGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQEVA 252
Query: 243 TRH 245
+
Sbjct: 253 DTY 255
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 70.5 bits (171), Expect = 1e-14
Identities = 35/286 (12%), Positives = 76/286 (26%), Gaps = 47/286 (16%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPF-------YTFETWASQLNDFCKDVVKDQA 55
+ V+ + G ++ + F + ++ K +D+
Sbjct: 88 ADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKL 147
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA 115
++ +S G +G A P++ + + + +K L+ L +
Sbjct: 148 HYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIF 207
Query: 116 AGKLFYKMVATSESVRNILC---------------QCYNDTSQVTEELVEKILQPGLETG 160
K+FY + + +C C DT + ++ L
Sbjct: 208 GNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGT 267
Query: 161 AADVFL---------EFICYSGGPL------------PEELLPQVKCPVLIAWGDKDPWE 199
+ L +F + G P L + P+ + G D
Sbjct: 268 SVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLA 327
Query: 200 PIELGRA-YGNFDSVEDFIVLPNVGHCP---QDEAPHLVNPLVESF 241
++ +P H +AP V + S
Sbjct: 328 DPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSM 373
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.3 bits (170), Expect = 1e-14
Identities = 47/269 (17%), Positives = 95/269 (35%), Gaps = 31/269 (11%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+RV ++D+ GYG + Y E ++ F + QA FI + G
Sbjct: 57 QAGYRVLAMDMKGYGE-----SSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWG 111
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPW------------------------Y 99
G++ A+ PE R + LN + P
Sbjct: 112 GMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAEL 171
Query: 100 GRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159
+ L R+F++L R + L V + + + + + VTEE ++ +Q ++
Sbjct: 172 EQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS 231
Query: 160 GAADVF--LEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFI 217
G + + + L ++ P L+ +KD ++ + ++
Sbjct: 232 GFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRG 291
Query: 218 VLPNVGHCPQDEAPHLVNPLVESFVTRHA 246
+ + GH Q + P VN ++ ++ A
Sbjct: 292 HIEDCGHWTQMDKPTEVNQILIKWLDSDA 320
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 67.2 bits (162), Expect = 9e-14
Identities = 50/247 (20%), Positives = 79/247 (31%), Gaps = 23/247 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +RV D G+ N D A + + D+A + N++
Sbjct: 57 VDAGYRVILKDSPGF------NKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAM 110
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG L A+ P+ +IL+ P P+ LL A +
Sbjct: 111 GGATALNFALEYPDRIGKLILMGPGGLG------PSMFAPMPMEGIKLLFKLYAEPSYET 164
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGL---ETGAADVFLEFICYSGGPLPEE 179
+ + +L D S +TEEL++ + E +
Sbjct: 165 L-------KQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTA 217
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239
L ++K I WG D + P++ G V GH Q E N LV
Sbjct: 218 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI 277
Query: 240 SFVTRHA 246
F+ RHA
Sbjct: 278 DFL-RHA 283
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 67.2 bits (162), Expect = 9e-14
Identities = 35/245 (14%), Positives = 76/245 (31%), Gaps = 10/245 (4%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+A SHR + DLIG + Y F+ L+ F + + ++ + +
Sbjct: 52 VAPSHRCIAPDLIGM-------GKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDW 104
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G +G A PE +G+ + + + P + R ++F+
Sbjct: 105 GSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNA 164
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPL---PEE 179
+ + + E ++ + + L ++ + + L
Sbjct: 165 FIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMN 224
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239
L Q P L+ WG P + + H Q++ P L+ +
Sbjct: 225 WLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIA 284
Query: 240 SFVTR 244
++
Sbjct: 285 RWLPG 289
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 66.4 bits (160), Expect = 2e-13
Identities = 45/245 (18%), Positives = 85/245 (34%), Gaps = 32/245 (13%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+K +RV + D++G+G++D+P ++ + + ++A + N+
Sbjct: 49 LSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIG------IMDALEIEKAHIVGNAF 102
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG + + A+ E M+L+ + + + +
Sbjct: 103 GGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNA--------------------VWG 142
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI------CYSGGPL 176
+ E++RN+L D S VT+EL + ++ G + F
Sbjct: 143 YTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALAS 202
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236
+E + + LI G +D P+ G V GH Q E N
Sbjct: 203 SDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNR 262
Query: 237 LVESF 241
LV F
Sbjct: 263 LVVEF 267
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 65.2 bits (157), Expect = 5e-13
Identities = 36/258 (13%), Positives = 64/258 (24%), Gaps = 28/258 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+R+ D G G S D T + + + D+ S
Sbjct: 57 DPAKYRIVLFDQRGSGRSTP-----HADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSW 111
Query: 63 GGLVGLQAAVMEPEICRGMILLNISL------RMLHIKKQPWYGRPLIRSFQNLLRNTAA 116
G + L A P+ ++L I L + + + N +
Sbjct: 112 GSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVER 171
Query: 117 GKLFYKM----------VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL 166
L + + + + V E+ V A +
Sbjct: 172 ADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIEN 231
Query: 167 EFICYSG-----GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPN 221
+ G L + P +I G D P++ + P
Sbjct: 232 HYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPA 291
Query: 222 VGHCPQDEAPHLVNPLVE 239
GH + P V+ LV
Sbjct: 292 SGHSAFE--PENVDALVR 307
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 63.7 bits (153), Expect = 1e-12
Identities = 36/245 (14%), Positives = 67/245 (27%), Gaps = 22/245 (8%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+ ++ +DL G+G S D + K + + +
Sbjct: 34 LSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQA------PDKAIWLGWSLGGLVAS 87
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
Q A+ PE R ++ + S + P ++ FQ L + +
Sbjct: 88 ------QIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVE-- 139
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
R + Q + + K L DV + + L
Sbjct: 140 --------RFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQ 191
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242
V P L +G D P ++ + + H P P L+ +
Sbjct: 192 NVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALK 251
Query: 243 TRHAT 247
R +
Sbjct: 252 QRVGS 256
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 63.7 bits (153), Expect = 2e-12
Identities = 31/247 (12%), Positives = 70/247 (28%), Gaps = 7/247 (2%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
A R+ + DLIG G SDK +P + + + D+ + +
Sbjct: 51 CAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEH--RDYLDALWEALDLGDRVVLVVHDW 108
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G +G A E +G+ + + P R L ++F++ +
Sbjct: 109 GSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVF 168
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFIC---YSGGPLPEE 179
+ + + L + + + + +
Sbjct: 169 VEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAG 228
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239
L + P L + + + + + H Q+++P + +
Sbjct: 229 WLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQT--EITVAGAHFIQEDSPDEIGAAIA 286
Query: 240 SFVTRHA 246
+FV R
Sbjct: 287 AFVRRLR 293
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 61.8 bits (148), Expect = 9e-12
Identities = 33/256 (12%), Positives = 62/256 (24%), Gaps = 17/256 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
V D G + F Y F A+ D+A + S+
Sbjct: 47 ADGGLHVIRYDHRDTGR----STTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSM 102
Query: 63 GGLVGLQAAVMEPEICRGMILLNIS------------LRMLHIKKQPWYGRPLIRSFQNL 110
G + A+ + + +L + G
Sbjct: 103 GATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALA 162
Query: 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFIC 170
L N A ++ R + E+ + A+ + +
Sbjct: 163 LMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGV-LAEPYAHYSL 221
Query: 171 YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA 230
P L +V P L+ + DP P G+ +P +GH
Sbjct: 222 TLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSV 281
Query: 231 PHLVNPLVESFVTRHA 246
+ ++ + A
Sbjct: 282 HGPLAEVILAHTRSAA 297
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 59.5 bits (143), Expect = 5e-11
Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 19/114 (16%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+ +VY +L G+ D PN E + + + I +S G
Sbjct: 39 SHGAKVYVANLSGFQSDDGPN---------GRGEQLLAYVKQVLAATGATKVNLIGHSQG 89
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG 117
GL A + P++ + + P G Q++L+ G
Sbjct: 90 GLTSRYVAAVAPQLVASVTTIGT----------PHRGSEFADFVQDVLKTDPTG 133
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 59.2 bits (141), Expect = 5e-11
Identities = 35/239 (14%), Positives = 76/239 (31%), Gaps = 12/239 (5%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA++ V + DL G+ P + Q+ +++ + NS+
Sbjct: 52 LAENFFVVAPDL--IGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSM 109
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG V LQ V PE + L+ ++ + + L F
Sbjct: 110 GGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVY 169
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ I+ + + +++++ ++ G + +
Sbjct: 170 DPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATL----------G 219
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
++ VL+ G +D P++ + +VL GH Q E + P++
Sbjct: 220 RLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEH 278
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 59.7 bits (143), Expect = 5e-11
Identities = 34/264 (12%), Positives = 67/264 (25%), Gaps = 31/264 (11%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+ L GY +S P + A ++ KD+ + I
Sbjct: 137 TLPFHLVVPSLPGYTFSSGPP-----LDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDI 191
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM 123
G + + + C+ + L ++R + + L Y
Sbjct: 192 GSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAY-A 250
Query: 124 VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI-------------- 169
+ S I + + + EK LQ + ++ LE +
Sbjct: 251 MEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIH 310
Query: 170 ----CYSGGPLPEEL-----LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP 220
P + P ++ KD ++ F
Sbjct: 311 TYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR--SWIATTGNLVFFRDHA 368
Query: 221 NVGHCPQDEAPHLVNPLVESFVTR 244
GH E P + + +FV +
Sbjct: 369 EGGHFAALERPRELKTDLTAFVEQ 392
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 58.4 bits (139), Expect = 1e-10
Identities = 35/247 (14%), Positives = 67/247 (27%), Gaps = 10/247 (4%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ V D G + F K ++ F + +S
Sbjct: 49 TKEGITVLFYDQFGC-----GRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSY 103
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKK--QPWYGRPLIRSFQNLLRNTAAGKLF 120
GG + L AV + +G+I+ + K + + + ++G
Sbjct: 104 GGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYE 163
Query: 121 YKMV--ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE 178
A + L + + +V + L +
Sbjct: 164 NPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDIT 223
Query: 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238
+ + +K P LI G+ D P + E V + H E N L+
Sbjct: 224 DKISAIKIPTLITVGEYDEVTPNVARVIHEKIAGSE-LHVFRDCSHLTMWEDREGYNKLL 282
Query: 239 ESFVTRH 245
F+ +H
Sbjct: 283 SDFILKH 289
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 58.0 bits (138), Expect = 2e-10
Identities = 34/244 (13%), Positives = 73/244 (29%), Gaps = 8/244 (3%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ + V DL G+G S+KP+ D Y+ + A + ++A+ + +
Sbjct: 51 LAEHYDVIVPDLRGFGDSEKPDLNDLS---KYSLDKAADDQAALLDALGIEKAYVVGHDF 107
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
+V + + + + Q + A +
Sbjct: 108 AAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSS 167
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGP----LPE 178
+ ++ +TEE +E + ++ + + P +
Sbjct: 168 REVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTD 227
Query: 179 ELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237
PV + WG D P L + S + + GH E P +
Sbjct: 228 LDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDR 287
Query: 238 VESF 241
+++
Sbjct: 288 IKTA 291
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 54.9 bits (130), Expect = 1e-09
Identities = 41/241 (17%), Positives = 77/241 (31%), Gaps = 13/241 (5%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
A+ +RV + D G+G S +P + D L+ + F ++
Sbjct: 43 AAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQLIEHLDLRDAVL------FGFSTG 96
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG V L++ ++ + G P+ + A YK
Sbjct: 97 GGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYK 156
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+A ++ + +V+ G+ G + + +S E+L
Sbjct: 157 DLA-----SGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDL-K 210
Query: 183 QVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
++ P L+ GD D PIE G A + H D +N + +F
Sbjct: 211 KIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAF 270
Query: 242 V 242
+
Sbjct: 271 I 271
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 55.3 bits (131), Expect = 1e-09
Identities = 32/257 (12%), Positives = 67/257 (26%), Gaps = 27/257 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ ++V D G G S T + + + +Q S
Sbjct: 57 DPERYKVLLFDQRGCGRSR-----PHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSW 111
Query: 63 GGLVGLQAAVMEPEICRGMILLNISL----------RMLHIKKQPWYGRPLIRSFQNLLR 112
G + L A PE M+L I + + P ++ + R
Sbjct: 112 GSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDER 171
Query: 113 NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFIC-- 170
++ + V+ + ++ T L+ + I
Sbjct: 172 KDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENH 231
Query: 171 --------YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNV 222
S L + P +I G D ++ + ++
Sbjct: 232 YFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGA 291
Query: 223 GHCPQDEAPHLVNPLVE 239
GH + P +++ L+
Sbjct: 292 GHSYDE--PGILHQLMI 306
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 54.5 bits (129), Expect = 2e-09
Identities = 37/245 (15%), Positives = 70/245 (28%), Gaps = 17/245 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L +RV + D G+G S +P +D T L+ +V +
Sbjct: 47 LDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVA- 105
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
+ + L L G F ++ A + +
Sbjct: 106 -----RYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFY 160
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE--EL 180
YN + + E+ ++ T A+ F +
Sbjct: 161 T--------GFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRAD 212
Query: 181 LPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239
+P++ P LI G D PIE R + +++ + H VN +
Sbjct: 213 IPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL 272
Query: 240 SFVTR 244
+F+ +
Sbjct: 273 AFLAK 277
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 54.2 bits (128), Expect = 3e-09
Identities = 43/241 (17%), Positives = 76/241 (31%), Gaps = 13/241 (5%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+ +RV + D G+ D A ++ ++
Sbjct: 45 LSHGYRVIAHDRRGH------GRSDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTG 98
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG V A EP +L++ ++ G PL + A FY
Sbjct: 99 GGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYI 158
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
V + + V++ L++ G+ GAA+ E I + L
Sbjct: 159 DVP-----SGPFYGFNREGATVSQGLIDHWWLQGM-MGAANAHYECIAAFSETDFTDDLK 212
Query: 183 QVKCPVLIAWGDKDPWEPI-ELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
++ PVL+A G D P + + + H P ++NP + +F
Sbjct: 213 RIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAF 272
Query: 242 V 242
V
Sbjct: 273 V 273
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 54.2 bits (128), Expect = 3e-09
Identities = 8/65 (12%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236
+A G KD ++ + + + + + GH Q+ +
Sbjct: 242 SFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVARE 301
Query: 237 LVESF 241
++ F
Sbjct: 302 ALKHF 306
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 53.4 bits (126), Expect = 5e-09
Identities = 35/243 (14%), Positives = 67/243 (27%), Gaps = 11/243 (4%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ +RV + D G+G S K N +D T D V+ +
Sbjct: 47 LAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLET-LDLRDVVLVGFSMGTGELA 105
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
+ + + + R + + P I + R +
Sbjct: 106 RYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKN 165
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
E++ + + + A + E +
Sbjct: 166 FYNLDENLGSRISEQAVT---------GSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVR 216
Query: 183 QVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
P LI G KD PI+ R + D++ + H VN +++F
Sbjct: 217 AAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTF 276
Query: 242 VTR 244
+ +
Sbjct: 277 LAK 279
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 52.6 bits (124), Expect = 8e-09
Identities = 29/241 (12%), Positives = 67/241 (27%), Gaps = 21/241 (8%)
Query: 3 LAKSH-RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
LA++ ++DL G+ + + + + S
Sbjct: 39 LARTQCAALTLDLPGH------GTNPERHCDNFAEAVEMIEQTVQAHVTSEVPVILVGYS 92
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG + + + I +++ Q R +
Sbjct: 93 LGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHV 152
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
++V + L + + L+ + + A L + P L
Sbjct: 153 LSDWYQQAVFSSLNH------EQRQTLIAQRSANLGSSVAH--MLLATSLAKQPYLLPAL 204
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 241
+K P+ G++D +L + G + + GH E P +V++
Sbjct: 205 QALKLPIHYVCGEQDSKFQ-QLAESSGL-----SYSQVAQAGHNVHHEQPQAFAKIVQAM 258
Query: 242 V 242
+
Sbjct: 259 I 259
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 51.0 bits (120), Expect = 4e-08
Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 49/263 (18%)
Query: 1 MVLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFI 58
L K + Y ID G G S D+ +A +
Sbjct: 87 YFLRKGYSTYVIDQSGRGRSATDISA-------INAVKLGKAPASSLPDLFAAGHEAAWA 139
Query: 59 CNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK 118
G + + L + P + + + +
Sbjct: 140 IFRFGPRYPDAFKDTQFPVQAQAELWQQMV--------PDWLGSMPTPNPTVANLSKLAI 191
Query: 119 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE 178
V S S I T+ + + + I+ P PE
Sbjct: 192 KLDGTVLLSHSQSGIYPF---QTAAMNPKGITAIVSV--------------EPGECPKPE 234
Query: 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE---------DFIVLPNV-----GH 224
++ P PVL+ +GD P R ++ + LP + H
Sbjct: 235 DVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSH 294
Query: 225 CPQ-DEAPHLVNPLVESFVTRHA 246
D V L+ ++ R+
Sbjct: 295 MMMQDRNNLQVADLILDWIGRNT 317
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 50.2 bits (119), Expect = 6e-08
Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 12/82 (14%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+VY ++ S+ E Q+ + + + I +S G
Sbjct: 37 RDGAQVYVTEVSQLDTSE------------VRGEQLLQQVEEIVALSGQPKVNLIGHSHG 84
Query: 64 GLVGLQAAVMEPEICRGMILLN 85
G A + P++ +
Sbjct: 85 GPTIRYVAAVRPDLIASATSVG 106
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 48.0 bits (112), Expect = 3e-07
Identities = 31/242 (12%), Positives = 69/242 (28%), Gaps = 15/242 (6%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
++ +R + D G+G SD+P + +D L+ +V
Sbjct: 44 SRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDV--- 100
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM 123
+ R L+ + ++P Y + + + +
Sbjct: 101 -----ARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFI 155
Query: 124 VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQ 183
+ I + QV + V+ + ++ + + +
Sbjct: 156 SDFNAPFYGI------NKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAK 209
Query: 184 VKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242
+ P L+ GD D P E G+ + V + H +N + +F+
Sbjct: 210 IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFL 269
Query: 243 TR 244
R
Sbjct: 270 KR 271
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 45.3 bits (105), Expect = 3e-06
Identities = 33/245 (13%), Positives = 64/245 (26%), Gaps = 16/245 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +R + D G+G+S FD + L+ + +S+
Sbjct: 43 VDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDLLTDLDLRD-------VTLVAHSM 95
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG + +L ++ + IK F L + +
Sbjct: 96 GGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFW 155
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
++VT+ + + + E+L
Sbjct: 156 KD-----TAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDL-K 209
Query: 183 QVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQ--DEAPHLVNPLVE 239
+ P L+ GD D PI+ GR + V H N +
Sbjct: 210 KFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLL 269
Query: 240 SFVTR 244
F+ +
Sbjct: 270 EFLNK 274
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 42.2 bits (98), Expect = 3e-05
Identities = 23/235 (9%), Positives = 55/235 (23%), Gaps = 49/235 (20%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICN 60
V+ D + + + + +T T + L + I
Sbjct: 57 TNGFHVFRYDSLHHVGLSSGSIDE------FTMTTGKNSLCTVYHWLQTKGTQNIGLIAA 110
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
S+ V + + E+ + + + ++K + +
Sbjct: 111 SLSARVAYEVI-SDLELSFLITAVGVVNLRDTLEKALGFDYLSLPI-------------- 155
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEEL 180
++ +L + + G E D F L +
Sbjct: 156 ---------------------DELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTL--DK 192
Query: 181 LPQVKCPVLIAWGDKDPWEPIELGRA-YGNFDS-VEDFIVLPNVGHCPQDEAPHL 233
+ P++ + D W E + + L H + L
Sbjct: 193 VANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLVVL 247
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (89), Expect = 2e-04
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 186 CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242
P LI +GD+DP + +++ GH + P + + F+
Sbjct: 151 TPALIVYGDQDPMGQTSFEHLKQLPNH--RVLIMKGAGHPCYLDKPEEWHTGLLDFL 205
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 38.2 bits (88), Expect = 6e-04
Identities = 13/117 (11%), Positives = 26/117 (22%), Gaps = 23/117 (19%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+ I + +D E + + ++ + S G
Sbjct: 58 QLGYTPCWISPPPFMLNDTQV----------NTEYMVNAITALYAGSGNNKLPVLTWSQG 107
Query: 64 GLVGLQAAVMEPEI---CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG 117
GLV P I ++ + G L L + +
Sbjct: 108 GLVAQWGLTFFPSIRSKVDRLMAFAP----------DYKGTVLAGPLDALAVSAPSV 154
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 36.5 bits (83), Expect = 0.002
Identities = 10/70 (14%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE-DFIVLPNVGHCPQDEAPHLVN 235
++L Q+ CP I G D + + + +V + HC
Sbjct: 274 TRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAEHLNLVVEKDGDHC-CHNLGIRPR 332
Query: 236 PLVESFVTRH 245
+ ++
Sbjct: 333 LEMADWLYDV 342
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 34.4 bits (78), Expect = 0.004
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 14/87 (16%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
+ Y +DL GYG ++ P F +A +N + + +G +
Sbjct: 42 YAFYLLDLPGYGRTEGPRMAPEELAHFV--AGFAVMMNL-------GAPWVLLRGLGLAL 92
Query: 67 GLQAAV-----MEPEICRGMILLNISL 88
G + E +L+ L
Sbjct: 93 GPHLEALGLRALPAEGVEVAEVLSSKL 119
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 261 | |||
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.98 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.98 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.98 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.98 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.97 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.97 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.97 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.97 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.97 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.97 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.97 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.97 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.97 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.97 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.96 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.96 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.96 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.96 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.95 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.95 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.94 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.94 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.92 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.92 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.91 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.9 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.86 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.82 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.82 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.79 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.78 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.78 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.77 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.76 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.76 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.73 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.73 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.71 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.66 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.6 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.58 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.57 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.47 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.47 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.46 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.41 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.36 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.29 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.28 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.28 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.23 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.21 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.12 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.05 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.03 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.01 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 98.99 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 98.98 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 98.91 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 98.67 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 98.66 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 98.31 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 98.22 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 98.2 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 98.11 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.08 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.07 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.02 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.0 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 97.98 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 97.96 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 97.8 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 97.76 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 97.75 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 97.7 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 97.67 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 97.62 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 97.61 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 97.33 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 97.28 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 96.22 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 96.19 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.18 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.15 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.13 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.11 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.09 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 95.63 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 95.56 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 95.54 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 95.31 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 94.1 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 91.79 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 89.08 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 86.91 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 86.41 |
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.6e-32 Score=222.99 Aligned_cols=220 Identities=21% Similarity=0.342 Sum_probs=141.0
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+.+.. ..++.+++++++..+++.++.++++|+||||||.+++.+|.++|++++++
T Consensus 48 ~l~~~~~vi~~Dl~G~G~S~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~l 121 (271)
T d1uk8a_ 48 ALSKFYRVIAPDMVGFGFTDRPEN------YNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRM 121 (271)
T ss_dssp HHTTTSEEEEECCTTSTTSCCCTT------CCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHhCCCEEEEEeCCCCCCcccccc------ccccccccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchhe
Confidence 367899999999999999987542 34689999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccC---CCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 82 ILLNISLRMLHIKKQ---PWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
|++++.......... .+................. ................... .. ...+..... ..
T Consensus 122 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~----~~ 190 (271)
T d1uk8a_ 122 VLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFA----YDRSLVTDELARLRYEASI--QP-GFQESFSSM----FP 190 (271)
T ss_dssp EEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHC----SCGGGCCHHHHHHHHHHHT--ST-THHHHHHTT----SC
T ss_pred eecccCCCcccchhhhhhhhhccchhHHHHHHHHHHh----hhcccchhHHHHHHHhhhh--ch-hHHHHHHhh----cc
Confidence 999875422100000 0000000000100000000 0000001111100000000 00 000111000 00
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
. ....... .. ....+.++++++|||+|+|++|.++|.+..+.+.+..+++++++++++||++++|+|++|++.|
T Consensus 191 ~-~~~~~~~--~~---~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 264 (271)
T d1uk8a_ 191 E-PRQRWID--AL---ASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLV 264 (271)
T ss_dssp S-STHHHHH--HH---CCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHTHHHHHHHH
T ss_pred h-hhhhhhh--hc---cccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHH
Confidence 0 0111111 11 1123457889999999999999999998887787777889999999999999999999999999
Q ss_pred HHHHHh
Q 024900 239 ESFVTR 244 (261)
Q Consensus 239 ~~fl~~ 244 (261)
.+||++
T Consensus 265 ~~Fl~e 270 (271)
T d1uk8a_ 265 VEFFNE 270 (271)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999986
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=1.6e-32 Score=222.63 Aligned_cols=216 Identities=21% Similarity=0.351 Sum_probs=140.4
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC-CeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.|+++|+|+++|+||||.|+.+. ..++.+.+++|+.+++++++.+ +++++||||||.+++.+|.++|++|++
T Consensus 47 ~l~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~ 119 (268)
T d1j1ia_ 47 ILARHYRVIAMDMLGFGKTAKPD-------IEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNA 119 (268)
T ss_dssp HHTTTSEEEEECCTTSTTSCCCS-------SCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEE
T ss_pred HHhcCCEEEEEcccccccccCCc-------cccccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhhe
Confidence 36789999999999999998753 3478999999999999999875 699999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+|+++++........ .+......... .............+.....++.............
T Consensus 120 lil~~~~~~~~~~~~----------~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (268)
T d1j1ia_ 120 LVLMGSAGLVVEIHE----------DLRPIINYDFT----------REGMVHLVKALTNDGFKIDDAMINSRYTYATDEA 179 (268)
T ss_dssp EEEESCCBCCCC--------------------CCSC----------HHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHH
T ss_pred eeecCCCccccccch----------hhhhhhhhhhh----------hhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhh
Confidence 999997543211000 00000000000 0000000000001111111111111100000000
Q ss_pred hHHHH----HHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 161 AADVF----LEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 161 ~~~~~----~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
....+ .............+.++++++||++|+|++|.++|++..+.+.+..|++++++++++||++++|+|++|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 259 (268)
T d1j1ia_ 180 TRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFAN 259 (268)
T ss_dssp HHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHH
T ss_pred hhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHH
Confidence 11111 11111111112234578999999999999999999988877877778899999999999999999999999
Q ss_pred HHHHHHHh
Q 024900 237 LVESFVTR 244 (261)
Q Consensus 237 ~l~~fl~~ 244 (261)
.|.+||.+
T Consensus 260 ~i~~FL~~ 267 (268)
T d1j1ia_ 260 ATLSFLSL 267 (268)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcC
Confidence 99999975
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.98 E-value=2.3e-32 Score=225.11 Aligned_cols=228 Identities=13% Similarity=0.109 Sum_probs=141.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
++++|+|+++|+||||+|+.+... ...|++.++++|+..++++++.++++++||||||.+++.+|..+|++|+++|
T Consensus 47 ~~~g~~vi~~D~~G~G~S~~~~~~----~~~~~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lv 122 (297)
T d1q0ra_ 47 ADGGLHVIRYDHRDTGRSTTRDFA----AHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLT 122 (297)
T ss_dssp HTTTCEEEEECCTTSTTSCCCCTT----TSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HhCCCEEEEEeCCCCccccccccc----ccccccchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeE
Confidence 467899999999999999865321 2358999999999999999999999999999999999999999999999999
Q ss_pred Eeecchhhhh--------hccCCCCC---chhhHHHHHHhhhhhhhHHHHHhhcCh-HHHHHHH---HhhcCCCCCCcHH
Q 024900 83 LLNISLRMLH--------IKKQPWYG---RPLIRSFQNLLRNTAAGKLFYKMVATS-ESVRNIL---CQCYNDTSQVTEE 147 (261)
Q Consensus 83 ~~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~ 147 (261)
++++...... ....+... ............ .+...... ......+ .............
T Consensus 123 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (297)
T d1q0ra_ 123 MLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALAL-------MNQPAEGRAAEVAKRVSKWRILSGTGVPFDDA 195 (297)
T ss_dssp EESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHH-------HHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHH
T ss_pred EEccccccccchhhhHHHhhhhhhhhhhhhhhHHHHHHHHH-------hccccchhhHHHHHHHHHHhhhccccccchHH
Confidence 9986532110 00000000 000000000000 00000000 0000000 0000111111121
Q ss_pred HHHHHhc----cC--CCCchHHHHHHHHhhcC-CCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcC
Q 024900 148 LVEKILQ----PG--LETGAADVFLEFICYSG-GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP 220 (261)
Q Consensus 148 ~~~~~~~----~~--~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~ 220 (261)
....... .. ....... ...... .......+++|++||++|+|++|.++|++..+.+.+..|++++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~ 271 (297)
T d1q0ra_ 196 EYARWEERAIDHAGGVLAEPYA----HYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIP 271 (297)
T ss_dssp HHHHHHHHHHHHTTTCCSCCCG----GGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEET
T ss_pred HHHHHHHHhhhhccccchhhhh----hhhhhhccccchhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEEC
Confidence 1111100 00 0000000 000000 00112357889999999999999999998888888888889999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 221 NVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 221 ~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
++||+++.|+|++|++.|.+||++.
T Consensus 272 ~~gH~~~~e~p~~~~~~i~~~l~~~ 296 (297)
T d1q0ra_ 272 GMGHALPSSVHGPLAEVILAHTRSA 296 (297)
T ss_dssp TCCSSCCGGGHHHHHHHHHHHHHHT
T ss_pred CCCCcchhhCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999863
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.98 E-value=7.5e-32 Score=220.72 Aligned_cols=223 Identities=21% Similarity=0.188 Sum_probs=143.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
++++|+|+++|+||||.|..+.. ..++...+++|+.+++++++.++++++||||||.+++.+|.++|++|+++|
T Consensus 57 ~~~g~~v~~~D~~G~G~S~~~~~------~~~~~~~~~~~i~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~li 130 (283)
T d2rhwa1 57 VDAGYRVILKDSPGFNKSDAVVM------DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLI 130 (283)
T ss_dssp HHTTCEEEEECCTTSTTSCCCCC------SSCHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHCCCEEEEEeCCCCcccccccc------cccccchhhhhcccccccccccccccccccchHHHHHHHHHHhhhhcceEE
Confidence 46789999999999999986532 345677889999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC-Cch
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE-TGA 161 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 161 (261)
++++........ .+ ........+....... .....+..+...........++........... ...
T Consensus 131 l~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (283)
T d2rhwa1 131 LMGPGGLGPSMF-AP-MPMEGIKLLFKLYAEP-----------SYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEH 197 (283)
T ss_dssp EESCSCCCCCSS-SC-SSCHHHHHHHHHHHSC-----------CHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred EeCCCcCCcchh-hh-hhHHHHHHHHHHhhhh-----------hhhhHHHHHHHhhcccccCcHHHHHHHHHHhhhhhhh
Confidence 999753321100 00 0111111111111110 011111111111111122223322222111000 001
Q ss_pred HHHH-HHHHh-hcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 162 ADVF-LEFIC-YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 162 ~~~~-~~~~~-~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
...+ ..... ........+.+.+|++|+++|+|++|.++|.+.++.+.+..+++++++++++||++++|+|++|++.|.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 277 (283)
T d2rhwa1 198 LKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI 277 (283)
T ss_dssp HHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred hhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 1111 11100 000011134578899999999999999999988777776678899999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+||++
T Consensus 278 ~FLk~ 282 (283)
T d2rhwa1 278 DFLRH 282 (283)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 99976
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=1.2e-31 Score=216.51 Aligned_cols=219 Identities=18% Similarity=0.197 Sum_probs=134.9
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||+|+.+. .+++.+++ +.+..++.++++++||||||.+++.+|.++|++++++
T Consensus 33 ~L~~~~~vi~~D~~G~G~S~~~~--------~~~~~d~~----~~~~~~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l 100 (256)
T d1m33a_ 33 ELSSHFTLHLVDLPGFGRSRGFG--------ALSLADMA----EAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRAL 100 (256)
T ss_dssp HHHTTSEEEEECCTTSTTCCSCC--------CCCHHHHH----HHHHTTSCSSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHhCCCEEEEEeCCCCCCccccc--------cccccccc----cccccccccceeeeecccchHHHHHHHHhCCccccee
Confidence 36789999999999999998642 24555544 4445677899999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHH---HhccCCC
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEK---ILQPGLE 158 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 158 (261)
+++++.+........+.........+...+..... ....+...... ............ .......
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 168 (256)
T d1m33a_ 101 VTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQ-----------RTVERFLALQT-MGTETARQDARALKKTVLALPM 168 (256)
T ss_dssp EEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHH-----------HHHHHHHHTTS-TTSTTHHHHHHHHHHHHHTSCC
T ss_pred eeeecccccccchhhhhhHHHHHHHHHhhhhhhhH-----------HHHHHHhhhhh-ccccchhhHHHHHHHhhhhcch
Confidence 99987543321111111111111111111110000 00011111100 001111111111 1111111
Q ss_pred CchHHHHHHHH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 159 TGAADVFLEFI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
. ....+.... .....+ ..+.+++|+|||++|+|++|.++|++..+.+.+..|++++++|+++||++++|+|++|+++
T Consensus 169 ~-~~~~~~~~~~~~~~~~-~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 246 (256)
T d1m33a_ 169 P-EVDVLNGGLEILKTVD-LRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHL 246 (256)
T ss_dssp C-CHHHHHHHHHHHHHCC-CTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHH
T ss_pred h-hHHHHHhhhhhhcccc-hHHHHHhccCCccccccccCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHHCHHHHHHH
Confidence 1 111111111 111111 2356788999999999999999999988888888888999999999999999999999999
Q ss_pred HHHHHHhcC
Q 024900 238 VESFVTRHA 246 (261)
Q Consensus 238 l~~fl~~~~ 246 (261)
|.+|+++..
T Consensus 247 l~~fl~~ig 255 (256)
T d1m33a_ 247 LVALKQRVG 255 (256)
T ss_dssp HHHHHTTSC
T ss_pred HHHHHHHcC
Confidence 999998754
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.98 E-value=9.6e-32 Score=220.03 Aligned_cols=223 Identities=19% Similarity=0.259 Sum_probs=139.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceE
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 82 (261)
|+++|+|+++|+||||.|+.+...+ ....++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|
T Consensus 52 L~~~~~vi~~D~~G~G~S~~~~~~~--~~~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 129 (281)
T d1c4xa_ 52 LAENFFVVAPDLIGFGQSEYPETYP--GHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVA 129 (281)
T ss_dssp HHTTSEEEEECCTTSTTSCCCSSCC--SSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HhCCCEEEEEeCCCCcccccccccc--ccchhhHHHhhhhccccccccccccceeccccccccccccccccccccccceE
Confidence 6789999999999999998653211 01124577889999999999999999999999999999999999999999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCC--CcHHHHHHHhccCCCCc
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ--VTEELVEKILQPGLETG 160 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 160 (261)
++++...... ........+........ .......+.....+... ...+.............
T Consensus 130 li~~~~~~~~------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (281)
T d1c4xa_ 130 LMGSVGAPMN------ARPPELARLLAFYADPR-----------LTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPE 192 (281)
T ss_dssp EESCCSSCCS------SCCHHHHHHHTGGGSCC-----------HHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHH
T ss_pred EeccccCccc------cchhHHHHHHHhhhhcc-----------cchhhhhhhhhcccccccchhhhHHHHHhhhcccch
Confidence 9997532210 00011111110111000 00011111111111110 00111111100000000
Q ss_pred ---hHHHHH-HHHh-hcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 161 ---AADVFL-EFIC-YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 161 ---~~~~~~-~~~~-~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
...... .+.. ..........+.+|++|||+|+|++|.++|++..+.+.+..+++++++++++||++++|+|++|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 272 (281)
T d1c4xa_ 193 VRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMG 272 (281)
T ss_dssp HHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHH
T ss_pred hhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHH
Confidence 000110 0000 00001112346889999999999999999998887777777889999999999999999999999
Q ss_pred HHHHHHHHh
Q 024900 236 PLVESFVTR 244 (261)
Q Consensus 236 ~~l~~fl~~ 244 (261)
++|.+||++
T Consensus 273 ~~i~~Fl~s 281 (281)
T d1c4xa_ 273 PMLMEHFRA 281 (281)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhCC
Confidence 999999973
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.97 E-value=1.5e-31 Score=217.48 Aligned_cols=223 Identities=17% Similarity=0.177 Sum_probs=137.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhH-HHHHHHHhhCcccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGG-LVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg-~va~~~a~~~p~~v~~lv 82 (261)
+++|+|+++|+||||.|+++. ..++++++++|+.+++++++.++++++|||||| .+++.+|..+|++|+++|
T Consensus 48 ~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lv 120 (277)
T d1brta_ 48 DAGYRVITYDRRGFGQSSQPT-------TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVA 120 (277)
T ss_dssp HTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEE
T ss_pred hCCCEEEEEeCCCCCcccccc-------cccchhhhhhhhhhhhhccCcccccccccccchhhhhHHHHHhhhcccceEE
Confidence 468999999999999998643 358999999999999999999999999999996 566667778899999999
Q ss_pred Eeecchhhhhhc-cCCC--CCchhhHHHHHHhhhhhh--hHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 83 LLNISLRMLHIK-KQPW--YGRPLIRSFQNLLRNTAA--GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 83 ~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
++++........ .... ........+......... ...++...... .... ......+..........
T Consensus 121 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~ 191 (277)
T d1brta_ 121 FLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNL-------DENL--GTRISEEAVRNSWNTAA 191 (277)
T ss_dssp EESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTH-------HHHB--TTTBCHHHHHHHHHHHH
T ss_pred EecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhcccccccc-------chhh--hhhhhHHHhhhhhcccc
Confidence 998753221100 0000 001111111111110000 00000000000 0000 11222222222111100
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchh-hhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
.......... .........+.+++|++||++|+|++|.+++.+. .+.+.+..++++++.++++||++++|+|++|++
T Consensus 192 ~~~~~~~~~~--~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 269 (277)
T d1brta_ 192 SGGFFAAAAA--PTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNT 269 (277)
T ss_dssp HSCHHHHHHG--GGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHH
T ss_pred hhhhhhhhhh--hhhhhhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHH
Confidence 0111111100 0111112234578899999999999999998764 455666678899999999999999999999999
Q ss_pred HHHHHHHh
Q 024900 237 LVESFVTR 244 (261)
Q Consensus 237 ~l~~fl~~ 244 (261)
.|.+||++
T Consensus 270 ~i~~fL~k 277 (277)
T d1brta_ 270 ALLAFLAK 277 (277)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHCc
Confidence 99999975
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.97 E-value=1.7e-31 Score=218.91 Aligned_cols=238 Identities=13% Similarity=0.111 Sum_probs=144.3
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+++... ....++++++++|+.+++++++.++++++||||||.+++.+|..+|+++.++
T Consensus 50 ~l~~~~~vi~~D~~G~G~s~~~~~~---~~~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 126 (293)
T d1ehya_ 50 PLAEHYDVIVPDLRGFGDSEKPDLN---DLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKA 126 (293)
T ss_dssp HHHTTSEEEEECCTTSTTSCCCCTT---CGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEE
T ss_pred HHhcCCEEEEecCCcccCCcccccc---ccccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCcccccee
Confidence 3678999999999999999865421 1235689999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHh-hcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM-VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
|++++........... ......................... .......+..+............+.+...........
T Consensus 127 vl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (293)
T d1ehya_ 127 AIFDPIQPDFGPVYFG-LGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPD 205 (293)
T ss_dssp EEECCSCTTC------------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTT
T ss_pred eeeeccCccccchhhh-hhhhhhhhhhhhhccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccch
Confidence 9999753211000000 0000000000000000000000000 0001111222222222233344444444333222222
Q ss_pred hHHHHHHHH-hhcC---CCCccccCCCCCCCEEEEecCCCCCCCchhh-hhhccCCCCccEEEcCCCCCCCCCCChhhHH
Q 024900 161 AADVFLEFI-CYSG---GPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDEAPHLVN 235 (261)
Q Consensus 161 ~~~~~~~~~-~~~~---~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 235 (261)
......... .... ..........+++||++|+|++|.++|.+.. +.+++..++.++++++++||++++|+|++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~ 285 (293)
T d1ehya_ 206 NIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAI 285 (293)
T ss_dssp HHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHH
T ss_pred hhhhhhhhhhhccccchhhhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHH
Confidence 222211111 1111 0111122456899999999999999887654 4566667789999999999999999999999
Q ss_pred HHHHHHHH
Q 024900 236 PLVESFVT 243 (261)
Q Consensus 236 ~~l~~fl~ 243 (261)
+.|++|++
T Consensus 286 ~~I~~Ffr 293 (293)
T d1ehya_ 286 DRIKTAFR 293 (293)
T ss_dssp HHHHHHCC
T ss_pred HHHHHhhC
Confidence 99999973
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.97 E-value=1.3e-32 Score=224.47 Aligned_cols=226 Identities=17% Similarity=0.205 Sum_probs=137.4
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-cCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
++++|+|+++|+||||.|+.+.. ..|+++.+++|+.++++++ +.++++||||||||.+++.+|.++|++|+++
T Consensus 49 ~~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 122 (290)
T d1mtza_ 49 TKEGITVLFYDQFGCGRSEEPDQ------SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGL 122 (290)
T ss_dssp GGGTEEEEEECCTTSTTSCCCCG------GGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEE
T ss_pred HHCCCEEEEEeCCCCcccccccc------ccccccchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheee
Confidence 46789999999999999987542 4589999999999999998 6889999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhh-h----HHHHH--hhcChHH---HHHHHHhhcCCCCCCcHHHHHH
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA-G----KLFYK--MVATSES---VRNILCQCYNDTSQVTEELVEK 151 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 151 (261)
|++++....... ............. . ..+.. ....+.. ................++....
T Consensus 123 vl~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (290)
T d1mtza_ 123 IVSGGLSSVPLT----------VKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKS 192 (290)
T ss_dssp EEESCCSBHHHH----------HHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHH
T ss_pred eecccccCcccc----------hhhhhhhhhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHH
Confidence 999865322100 0000000000000 0 00000 0000100 0111111111111122222221
Q ss_pred HhccCCCCchHHHHHHHHhhcC-----CCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCC
Q 024900 152 ILQPGLETGAADVFLEFICYSG-----GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226 (261)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 226 (261)
..... ................ .......++++++||++|+|++|.++| +..+.+.+..+++++++++++||++
T Consensus 193 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~ 270 (290)
T d1mtza_ 193 LEYAE-RRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLT 270 (290)
T ss_dssp HHHHH-HSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTCSSCH-HHHHHHHHHSTTCEEEEETTCCSCH
T ss_pred HHHHh-hhhhhhhhcchhHHhHhhhhhcccHHHHhhcccceEEEEEeCCCCCCH-HHHHHHHHHCCCCEEEEECCCCCch
Confidence 10000 0000000000000000 000123456789999999999998776 4455666667789999999999999
Q ss_pred CCCChhhHHHHHHHHHHhcC
Q 024900 227 QDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 227 ~~e~p~~~~~~l~~fl~~~~ 246 (261)
++|+|++|++.|.+||.++.
T Consensus 271 ~~e~p~~~~~~i~~FL~~h~ 290 (290)
T d1mtza_ 271 MWEDREGYNKLLSDFILKHL 290 (290)
T ss_dssp HHHSHHHHHHHHHHHHHTCC
T ss_pred HHhCHHHHHHHHHHHHHHhC
Confidence 99999999999999999863
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.97 E-value=2.6e-31 Score=217.77 Aligned_cols=228 Identities=20% Similarity=0.279 Sum_probs=145.3
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+|+++|+||||.|+++. ..++++++++|+.+++++++.++++|+||||||.+++.+|..+|++++++
T Consensus 51 ~L~~~~~vi~~d~~G~G~S~~~~-------~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~l 123 (291)
T d1bn7a_ 51 HVAPSHRCIAPDLIGMGKSDKPD-------LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 123 (291)
T ss_dssp HHTTTSCEEEECCTTSTTSCCCS-------CCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHhcCCEEEEEeCCCCccccccc-------cccchhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeee
Confidence 46789999999999999998763 35799999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
+++++.......... ...................... .........+.... ......+..............
T Consensus 124 i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (291)
T d1bn7a_ 124 ACMEFIRPIPTWDEW----PEFARETFQAFRTADVGRELII--DQNAFIEGVLPKCV--VRPLTEVEMDHYREPFLKPVD 195 (291)
T ss_dssp EEEEECCCBCSGGGS----CHHHHHHHHHHTSTTHHHHHHT--TSCHHHHTHHHHTC--SSCCCHHHHHHHHGGGSSGGG
T ss_pred eeeccccCCccchhh----hhhhhhHHHHHhhhhhHHHhhh--hhhhhHHhhhhhhc--cccchHHHHHHHHHHhcchhh
Confidence 999865332111010 0111111111111100000000 00000011111111 111223333322222222111
Q ss_pred HHHHHHHHhhcC--CCC---------ccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCC
Q 024900 162 ADVFLEFICYSG--GPL---------PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA 230 (261)
Q Consensus 162 ~~~~~~~~~~~~--~~~---------~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 230 (261)
............ ... ..+.+.++++||++|+|++|.++|++..+.+.+..+++++++++++||++++|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 275 (291)
T d1bn7a_ 196 REPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDN 275 (291)
T ss_dssp GHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCGGGTC
T ss_pred hHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhC
Confidence 111111111000 000 012356789999999999999999988888877778899999999999999999
Q ss_pred hhhHHHHHHHHHHh
Q 024900 231 PHLVNPLVESFVTR 244 (261)
Q Consensus 231 p~~~~~~l~~fl~~ 244 (261)
|++|++.|.+||+.
T Consensus 276 p~~v~~~i~~fL~~ 289 (291)
T d1bn7a_ 276 PDLIGSEIARWLPG 289 (291)
T ss_dssp HHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999976
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.97 E-value=4e-31 Score=215.32 Aligned_cols=227 Identities=18% Similarity=0.229 Sum_probs=138.1
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhH-HHHHHHHhhCcccccce
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGG-LVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg-~va~~~a~~~p~~v~~l 81 (261)
++++|+|+++|+||||.|+++. ..|+++++++|+.+++++++.++++|+|||||| .+++.+|..+|++|.++
T Consensus 47 ~~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~di~~~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~l 119 (279)
T d1hkha_ 47 LAQGYRVITYDRRGFGGSSKVN-------TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKL 119 (279)
T ss_dssp HHTTEEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEE
T ss_pred HHCCCEEEEEechhhCCccccc-------cccchhhhhhhhhhhhhhcCcCccccccccccccchhhhhcccccccccee
Confidence 4688999999999999998653 358999999999999999999999999999996 56666777889999999
Q ss_pred EEeecchhhhhhccC-C-CCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 82 ILLNISLRMLHIKKQ-P-WYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 82 v~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
|++++.......... . .........+......... . .+... .+..............++.+..........
T Consensus 120 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (279)
T d1hkha_ 120 AFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRF-A-WFTDF-----YKNFYNLDENLGSRISEQAVTGSWNVAIGS 192 (279)
T ss_dssp EEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHH-H-HHHHH-----HHHHHTHHHHBTTTBCHHHHHHHHHHHHTS
T ss_pred EEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhh-h-hhhhh-----hhhhcccchhhhhhhhhhhhhhhhhhhccc
Confidence 999865322111000 0 0001111111111111000 0 00000 010000000011223333332221111111
Q ss_pred chHHHHHHHHhhcCCCCc--cccCCCCCCCEEEEecCCCCCCCch-hhhhhccCCCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 160 GAADVFLEFICYSGGPLP--EELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~--~~~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
.....+........ ... .+.++.+++|+++|+|++|.+++.+ ..+.+.+..|++++++++++||++++|+|++|++
T Consensus 193 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~ 271 (279)
T d1hkha_ 193 APVAAYAVVPAWIE-DFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNA 271 (279)
T ss_dssp CTTHHHHTHHHHTC-BCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHH
T ss_pred chhhhhhhhhhhhc-ccccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHH
Confidence 11111111111110 010 1234667999999999999998865 4566766677899999999999999999999999
Q ss_pred HHHHHHHh
Q 024900 237 LVESFVTR 244 (261)
Q Consensus 237 ~l~~fl~~ 244 (261)
.|.+||++
T Consensus 272 ~i~~fl~k 279 (279)
T d1hkha_ 272 ALKTFLAK 279 (279)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHCc
Confidence 99999975
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.97 E-value=1.7e-31 Score=221.87 Aligned_cols=224 Identities=17% Similarity=0.216 Sum_probs=136.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
..+|+|+++|+||||.|+.+.. ...|+++.+++|+.+++++++.++++|+||||||.+++.+|+.+|++|++||+
T Consensus 72 ~~~~~vi~~Dl~G~G~S~~~~~-----~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl 146 (310)
T d1b6ga_ 72 ESGARVIAPDFFGFGKSDKPVD-----EEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLII 146 (310)
T ss_dssp HTTCEEEEECCTTSTTSCEESC-----GGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEE
T ss_pred ccCceEEEeeecCccccccccc-----cccccccccccchhhhhhhccccccccccceecccccccchhhhccccceEEE
Confidence 3679999999999999986532 14589999999999999999999999999999999999999999999999999
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhh---hhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA---AGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
+++....... .. ..+ ........ .................+..... ....++....+..+.....
T Consensus 147 ~~~~~~~~~~-~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 214 (310)
T d1b6ga_ 147 MNACLMTDPV-TQ----PAF----SAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWA---PTLTEAEASAYAAPFPDTS 214 (310)
T ss_dssp ESCCCCCCTT-TC----THH----HHTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHS---TTCCHHHHHHHHTTCSSGG
T ss_pred EcCccCCCcc-cc----hhH----HHHhhcchhhhhhhhhhhccchhhhhhhhhhccC---ccccHHHHHHHHhhcchhh
Confidence 9875422100 00 000 00000000 00000000000000000010000 1112222222211111110
Q ss_pred h---HHHHHHHHhhcCC-------CCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCc-cEEEcCCCCCCCCCC
Q 024900 161 A---ADVFLEFICYSGG-------PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE-DFIVLPNVGHCPQDE 229 (261)
Q Consensus 161 ~---~~~~~~~~~~~~~-------~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e 229 (261)
. ...+......... .........+++|+++|+|++|.+++++..+.+.+..++. +++++++|||++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e 294 (310)
T d1b6ga_ 215 YQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEF 294 (310)
T ss_dssp GCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGGG
T ss_pred hhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCccEEEECCCcCchhhh
Confidence 0 0111000000000 0001123578999999999999999988877776655544 788899999999999
Q ss_pred ChhhHHHHHHHHHHh
Q 024900 230 APHLVNPLVESFVTR 244 (261)
Q Consensus 230 ~p~~~~~~l~~fl~~ 244 (261)
+|+.++++|.+||++
T Consensus 295 ~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 295 GEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhC
Confidence 999999999999975
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=7e-31 Score=218.39 Aligned_cols=235 Identities=20% Similarity=0.229 Sum_probs=141.5
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||||+|+.+.. ...|+++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++
T Consensus 58 ~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 132 (322)
T d1zd3a2 58 AGYRVLAMDMKGYGESSAPPE-----IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASL 132 (322)
T ss_dssp TTCEEEEEECTTSTTSCCCSC-----GGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEE
T ss_pred CCCEEEEeccccccccccccc-----cccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEE
Confidence 579999999999999987542 145899999999999999999999999999999999999999999999999999
Q ss_pred ecchhhhhhccCCC---CCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhh---------------c--C-----
Q 024900 85 NISLRMLHIKKQPW---YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQC---------------Y--N----- 139 (261)
Q Consensus 85 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~--~----- 139 (261)
+++.........+. ..... ..+................ .........+... . .
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (322)
T d1zd3a2 133 NTPFIPANPNMSPLESIKANPV-FDYQLYFQEPGVAEAELEQ-NLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEP 210 (322)
T ss_dssp SCCCCCCCSSSCHHHHHHTCGG-GHHHHHTTSTTHHHHHHHH-THHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSC
T ss_pred cccccccccccchhhhhhccch-hhhHHhhhccchhhhhhhh-hHHHHHHHHhhccchhhhhHHHHhhhhccccccccch
Confidence 87543211000000 00000 0000000000000000000 0000000000000 0 0
Q ss_pred -CCCCCcHHHHHHHhccCCCCchHHHHHHHH-hh--cCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCcc
Q 024900 140 -DTSQVTEELVEKILQPGLETGAADVFLEFI-CY--SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED 215 (261)
Q Consensus 140 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~ 215 (261)
......++.+.......... ......... .. .........+.+|++||++|+|++|.+++++..+.+.+..++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~ 289 (322)
T d1zd3a2 211 SLSRMVTEEEIQFYVQQFKKS-GFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLK 289 (322)
T ss_dssp CCCTTCCHHHHHHHHHHHHHH-TTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTCE
T ss_pred hhhhhccHHHHHHHHHHHhhc-ccccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCE
Confidence 00001111111111000000 000000000 00 00000123467899999999999999999988877888888899
Q ss_pred EEEcCCCCCCCCCCChhhHHHHHHHHHHhcCC
Q 024900 216 FIVLPNVGHCPQDEAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 216 ~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~~ 247 (261)
+++++++||++++|+|++|++.|.+||+++.+
T Consensus 290 ~~~i~~~gH~~~~e~p~~v~~~i~~FL~~~~~ 321 (322)
T d1zd3a2 290 RGHIEDCGHWTQMDKPTEVNQILIKWLDSDAR 321 (322)
T ss_dssp EEEETTCCSCHHHHSHHHHHHHHHHHHHHHTC
T ss_pred EEEECCCCCchHHhCHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999998765
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.97 E-value=4.4e-30 Score=208.54 Aligned_cols=224 Identities=19% Similarity=0.177 Sum_probs=138.2
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhh-CcccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-EPEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~lv 82 (261)
+++|+|+++|+||||.|+.+. ..+++.++++|+.+++++++.++++++||||||.+++.+++. +|++|++++
T Consensus 44 ~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~ 116 (274)
T d1a8qa_ 44 DAGYRGIAHDRRGHGHSTPVW-------DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAV 116 (274)
T ss_dssp HTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEE
T ss_pred HCCCEEEEEeCCCCccccccc-------ccccchhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEE
Confidence 578999999999999998753 347899999999999999999999999999999999998766 599999999
Q ss_pred Eeecchhhhh-hccCCCCCchhhHHHHHHhhhhhhh--HHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 83 LLNISLRMLH-IKKQPWYGRPLIRSFQNLLRNTAAG--KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 83 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++++.+.... ....+. ......+ ..+...... ..++. ........... ....................
T Consensus 117 ~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 187 (274)
T d1a8qa_ 117 LLSAIPPVMIKSDKNPD--GVPDEVF-DALKNGVLTERSQFWK-----DTAEGFFSANR-PGNKVTQGNKDAFWYMAMAQ 187 (274)
T ss_dssp EESCCCSCCBCCSSCTT--SBCHHHH-HHHHHHHHHHHHHHHH-----HHHHHHTTTTS-TTCCCCHHHHHHHHHHHTTS
T ss_pred EEeccCccchhhhhccc--hhhHHHH-HHHHhhhhhhhHHHhh-----hhhhhhhhccc-cchhhhhhHHHHHHHhhhcc
Confidence 9987543211 111110 0011111 111110000 00000 00011111111 11112222222221111111
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhh-hhhccCCCCccEEEcCCCCCCCCC--CChhhHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQD--EAPHLVNP 236 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~--e~p~~~~~ 236 (261)
...........+.... ..+.+++|++||++|+|++|.+++.+.. +.+.+..|++++++++++||++++ ++|++|++
T Consensus 188 ~~~~~~~~~~~~~~~~-~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~ 266 (274)
T d1a8qa_ 188 TIEGGVRCVDAFGYTD-FTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNR 266 (274)
T ss_dssp CHHHHHHHHHHHHHCC-CHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHH
T ss_pred chhhhhhHHHHhhccc-hHHHHHhccceeeeeccCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHH
Confidence 1111111111111111 2345789999999999999999987654 556666788999999999999887 67999999
Q ss_pred HHHHHHHh
Q 024900 237 LVESFVTR 244 (261)
Q Consensus 237 ~l~~fl~~ 244 (261)
.|.+||++
T Consensus 267 ~i~~FL~k 274 (274)
T d1a8qa_ 267 DLLEFLNK 274 (274)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHCc
Confidence 99999974
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.97 E-value=6.1e-32 Score=216.41 Aligned_cols=220 Identities=13% Similarity=0.056 Sum_probs=137.0
Q ss_pred cC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-CCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
|+ .+|+|+++|+||||.|+++.. ..++++++++++.+++.+++ .++++|+||||||.+++.+|..+|++|++
T Consensus 25 L~~~g~~Via~Dl~G~G~S~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 98 (256)
T d3c70a1 25 LEALGHKVTALDLAASGVDPRQIE------EIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAA 98 (256)
T ss_dssp HHHTTCEEEEECCTTSTTCSCCGG------GCCSHHHHTHHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHHGGGEEE
T ss_pred HHhCCCEEEEEcCCCCCCCCCCCC------CCCCHHHHHHHhhhhhhhhccccceeecccchHHHHHHHHhhcCchhhhh
Confidence 44 469999999999999987531 35799999999999988875 67899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhh-hHH--------HHHhhcChHHHHHHHHhhcCCCCCCcHHHHHH
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA-GKL--------FYKMVATSESVRNILCQCYNDTSQVTEELVEK 151 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (261)
+|++++...... ................... ... ...........+ ................
T Consensus 99 lvl~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 169 (256)
T d3c70a1 99 AVFHNSVLPDTE-----HCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLR----ENLYTLCGPEEYELAK 169 (256)
T ss_dssp EEEESCCCCCSS-----SCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHH----HHTSTTSCHHHHHHHH
T ss_pred hheeccccCCcc-----cchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhh----hhhhhhcchhhHHHhh
Confidence 999997532110 0000011111100000000 000 000001111111 1111111100111111
Q ss_pred HhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCCh
Q 024900 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAP 231 (261)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 231 (261)
........ .. ..... .........+++|+++|+|++|.++|++..+.+.+..|++++++++++||++++|+|
T Consensus 170 ~~~~~~~~-~~----~~~~~---~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~agH~~~~e~P 241 (256)
T d3c70a1 170 MLTRKGSL-FQ----NILAK---RPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKT 241 (256)
T ss_dssp HHCCCBCC-CH----HHHTT---SCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCCSEEEECCSCCSCHHHHSH
T ss_pred hhhhhhhH-HH----hhhhh---cchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHhCH
Confidence 11110000 00 00000 111123455789999999999999999887777777778999999999999999999
Q ss_pred hhHHHHHHHHHHhc
Q 024900 232 HLVNPLVESFVTRH 245 (261)
Q Consensus 232 ~~~~~~l~~fl~~~ 245 (261)
++|+++|.+|+++.
T Consensus 242 ~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 242 KEIAEILQEVADTY 255 (256)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999874
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.97 E-value=2.1e-30 Score=210.34 Aligned_cols=221 Identities=21% Similarity=0.292 Sum_probs=138.2
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcCh-hHHHHHHHHhhCcccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI-GGLVGLQAAVMEPEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~-Gg~va~~~a~~~p~~v~~lv 82 (261)
+++|+|+++|+||||.|+.+. ..|+++++++|+.++++.++.+++++||||+ ||.+++.+|..+|++|+++|
T Consensus 46 ~~g~~vi~~D~~G~G~s~~~~-------~~~~~~~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lv 118 (275)
T d1a88a_ 46 SHGYRVIAHDRRGHGRSDQPS-------TGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAV 118 (275)
T ss_dssp HTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEE
T ss_pred hCCCEEEEEeccccccccccc-------ccccccccccccccccccccccccccccccccccchhhcccccCcchhhhhh
Confidence 578999999999999998653 3589999999999999999999999999997 66678888999999999999
Q ss_pred EeecchhhhhhccCCCCC--chhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhc---C-CCCCCcHHHHHHHhccC
Q 024900 83 LLNISLRMLHIKKQPWYG--RPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY---N-DTSQVTEELVEKILQPG 156 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~ 156 (261)
++++.+............ ......+...+..... .++ .......+ . ......+..........
T Consensus 119 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (275)
T d1a88a_ 119 LVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRA--QFY---------IDVPSGPFYGFNREGATVSQGLIDHWWLQG 187 (275)
T ss_dssp EESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHH--HHH---------HHHHHTTTTTTTSTTCCCCHHHHHHHHHHH
T ss_pred hhcccccccccchhhhhhhhhhhhhhhhhhhhhhhH--HHH---------HhhhhhhhhhcccchhhHHHHHHHHHHHhh
Confidence 998754321111100000 1111111111111000 000 00000000 0 11112222222221111
Q ss_pred CCCchHHHHHHH-HhhcCCCCccccCCCCCCCEEEEecCCCCCCCchh-hhhhccCCCCccEEEcCCCCCCCCCCChhhH
Q 024900 157 LETGAADVFLEF-ICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVEDFIVLPNVGHCPQDEAPHLV 234 (261)
Q Consensus 157 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 234 (261)
..... ...... ........ .+.+++|++||++|+|++|.++|.+. .+.+.+..+++++++++++||++++|+|++|
T Consensus 188 ~~~~~-~~~~~~~~~~~~~~~-~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 265 (275)
T d1a88a_ 188 MMGAA-NAHYECIAAFSETDF-TDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVL 265 (275)
T ss_dssp HHSCH-HHHHHHHHHHHHCCC-HHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHH
T ss_pred cccch-HHHHHHHHHhhhhhh-hHHHHhhccccceeecCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHH
Confidence 11111 111111 11111111 24467899999999999999998754 4556666778999999999999999999999
Q ss_pred HHHHHHHHHh
Q 024900 235 NPLVESFVTR 244 (261)
Q Consensus 235 ~~~l~~fl~~ 244 (261)
++.|.+||++
T Consensus 266 ~~~i~~Fl~s 275 (275)
T d1a88a_ 266 NPDLLAFVKS 275 (275)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHcC
Confidence 9999999973
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.96 E-value=1.5e-29 Score=205.05 Aligned_cols=223 Identities=17% Similarity=0.190 Sum_probs=137.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHH-HhhCcccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQA-AVMEPEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~-a~~~p~~v~~lv 82 (261)
+++|+|+++|+||||.|+.+. ..|++.++++|+.+++++++.++++++||||||.++..+ |..+|++|.+++
T Consensus 44 ~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~ 116 (273)
T d1a8sa_ 44 AQGYRVIAHDRRGHGRSSQPW-------SGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAG 116 (273)
T ss_dssp HTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEE
T ss_pred hCCCEEEEEechhcCcccccc-------ccccccchHHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeE
Confidence 578999999999999998753 358999999999999999999999999999988766555 555799999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcC----CCCCCcHHHHHHHhccCCC
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN----DTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 158 (261)
++++.+............. ....+.......... .....+......+. ......+............
T Consensus 117 l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (273)
T d1a8sa_ 117 LISAVPPLMLKTEANPGGL-PMEVFDGIRQASLAD--------RSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMA 187 (273)
T ss_dssp EESCCCSCCBCCSSCTTSB-CHHHHHHHHHHHHHH--------HHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHH
T ss_pred EEecccccccccccccccc-hhhhhhhHHHHHHHH--------HHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcc
Confidence 9987543221111111111 111111111000000 00000111111000 1111222222222211111
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh-ccCCCCccEEEcCCCCCCCCCCChhhHHHH
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
......+.......... ..+.+++|++||++|+|++|.++|.+..+.+ .+..++++++++|++||++++|+|++|++.
T Consensus 188 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 266 (273)
T d1a8sa_ 188 AGHKNAYDCIKAFSETD-FTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNAD 266 (273)
T ss_dssp SCHHHHHHHHHHHHHCC-CHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHH
T ss_pred cchhhhhhhHHHhhhhh-hhHHHHhhccceEEEecCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHH
Confidence 11111111111111111 2345788999999999999999988876554 455778999999999999999999999999
Q ss_pred HHHHHH
Q 024900 238 VESFVT 243 (261)
Q Consensus 238 l~~fl~ 243 (261)
|.+||+
T Consensus 267 i~~Fl~ 272 (273)
T d1a8sa_ 267 LLAFIK 272 (273)
T ss_dssp HHHHHH
T ss_pred HHHHcC
Confidence 999996
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.96 E-value=1.4e-28 Score=204.93 Aligned_cols=231 Identities=15% Similarity=0.084 Sum_probs=131.1
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.++++|+|+++|+||||+|+++.. ...|++.++++|+.++++++++++++||||||||.+++.+|..+|++|.++
T Consensus 56 ~l~~~~~Vi~~D~rG~G~S~~~~~-----~~~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 130 (313)
T d1azwa_ 56 HDPAKYRIVLFDQRGSGRSTPHAD-----LVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTEL 130 (313)
T ss_dssp SCTTTEEEEEECCTTSTTSBSTTC-----CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HhhcCCEEEEEeccccCCCCcccc-----ccchhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeee
Confidence 467899999999999999986542 245899999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhh-hcc--CCCCCchhhHHHHHHhhhh---h---hhHHHHHhhcC--hHHHH----HH-HHhhcCCCCCCc
Q 024900 82 ILLNISLRMLH-IKK--QPWYGRPLIRSFQNLLRNT---A---AGKLFYKMVAT--SESVR----NI-LCQCYNDTSQVT 145 (261)
Q Consensus 82 v~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~--~~~~~----~~-~~~~~~~~~~~~ 145 (261)
|++++...... ... ................... . .....+..+.. ..... .. ........-...
T Consensus 131 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (313)
T d1azwa_ 131 VLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVD 210 (313)
T ss_dssp EEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCC
T ss_pred eEeccccccccchhhhhhcccchhhhHHHHHHHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccc
Confidence 99987543210 000 0000000000011100000 0 00000010000 00000 00 000000000011
Q ss_pred HHHHHHHhccCCCC--chHHHHHHHHhhcCC-C--CccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcC
Q 024900 146 EELVEKILQPGLET--GAADVFLEFICYSGG-P--LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP 220 (261)
Q Consensus 146 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~--~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~ 220 (261)
.............. ............... . ...+..+.+++||++|+|++|.++|++.++.+.+..|++++++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~p~a~~~~i~ 290 (313)
T d1azwa_ 211 EDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISP 290 (313)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEET
T ss_pred hhhhcccchhHHHHHHhHHHHHHHhhccccccchhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEC
Confidence 11111100000000 000000000000000 0 012345678999999999999999999888888888889999999
Q ss_pred CCCCCCCCCChhhHHHHHH
Q 024900 221 NVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 221 ~~gH~~~~e~p~~~~~~l~ 239 (261)
++||+++ +|+.++++++
T Consensus 291 ~aGH~~~--ep~~~~~li~ 307 (313)
T d1azwa_ 291 ASGHSAF--EPENVDALVR 307 (313)
T ss_dssp TCCSSTT--SHHHHHHHHH
T ss_pred CCCCCCC--CchHHHHHHH
Confidence 9999975 4776655554
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.96 E-value=4.7e-29 Score=198.89 Aligned_cols=218 Identities=11% Similarity=0.027 Sum_probs=136.7
Q ss_pred cC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-CCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
|+ ++|+|+++|+||||.|+++.. ..+++.++++|+..++..... ++++++||||||.+++.++.++|+++++
T Consensus 25 L~~~g~~vi~~Dl~G~G~S~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS~Gg~va~~~a~~~p~~~~~ 98 (258)
T d1xkla_ 25 LEAAGHKVTALDLAASGTDLRKIE------ELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYA 98 (258)
T ss_dssp HHHTTCEEEECCCTTSTTCCCCGG------GCCSHHHHHHHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEE
T ss_pred HHhCCCEEEEecCCCCCCCCCCCC------CCcchHHHHHHHhhhhhcccccccccccccchhHHHHHHHhhhhccccce
Confidence 44 469999999999999987531 357899999999999888776 5899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHH-----------HHHhhcChHHHHHHHHhhcCCCCCCcHHHH
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL-----------FYKMVATSESVRNILCQCYNDTSQVTEELV 149 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (261)
+|++++...... ...................... .......+.... ....... ..+..
T Consensus 99 lil~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~ 167 (258)
T d1xkla_ 99 AVFLAAFMPDSV-----HNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLA----HKLYQLC--SPEDL 167 (258)
T ss_dssp EEEESCCCCCSS-----SCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHH----HHTSTTS--CHHHH
T ss_pred EEEecccCCCcc-----cchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHH----HHhhhcc--cHHHH
Confidence 999987532210 0000011111000000000000 000000111100 0000000 01111
Q ss_pred HHH--hccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCC
Q 024900 150 EKI--LQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 150 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 227 (261)
... ..... ....... .. ......+..+++|+++|+|++|.++|++..+.+.+..+++++++++++||+++
T Consensus 168 ~~~~~~~~~~-~~~~~~~----~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 239 (258)
T d1xkla_ 168 ALASSLVRPS-SLFMEDL----SK---AKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAM 239 (258)
T ss_dssp HHHHHHCCCB-CCCHHHH----HH---CCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCCSEEEEETTCCSCHH
T ss_pred HHhhhhhhhh-hhhhhhh----hh---hhhcccccccccceeEeeecCCCCCCHHHHHHHHHHCCCCEEEEECCCCCchH
Confidence 100 00000 0000000 00 01123456789999999999999999988877777677899999999999999
Q ss_pred CCChhhHHHHHHHHHHhc
Q 024900 228 DEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 228 ~e~p~~~~~~l~~fl~~~ 245 (261)
+|+|++|++.|.+|++++
T Consensus 240 ~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 240 LCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp HHSHHHHHHHHHHHHHHC
T ss_pred HhCHHHHHHHHHHHHHhc
Confidence 999999999999999875
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.96 E-value=3.2e-28 Score=196.54 Aligned_cols=224 Identities=16% Similarity=0.197 Sum_probs=135.3
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHH-HHhhCcccccceE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQ-AAVMEPEICRGMI 82 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~-~a~~~p~~v~~lv 82 (261)
+++|+|+++|+||||.|+.+. ..++++++++|+.++++.++.++++++|||+||.++.. +|..+|++|.+++
T Consensus 44 ~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v 116 (271)
T d1va4a_ 44 SRGYRTIAFDRRGFGRSDQPW-------TGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLV 116 (271)
T ss_dssp TTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEE
T ss_pred hCCCEEEEEeccccccccccc-------cccccccccccceeeeeecCCCcceeeccccccccccccccccccceeeEEE
Confidence 467999999999999998653 35799999999999999999999999999999876655 5667899999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhh-hhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA-AGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
++++......... ..........+........ ....+.. .......... ......+............. .
T Consensus 117 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~ 187 (271)
T d1va4a_ 117 LLGAVTPLFGQKP-DYPQGVPLDVFARFKTELLKDRAQFIS-----DFNAPFYGIN--KGQVVSQGVQTQTLQIALLA-S 187 (271)
T ss_dssp EESCCCSCCBCBT-TBTTSBCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHTGG--GTCCCCHHHHHHHHHHHHHS-C
T ss_pred eecccccccccch-hhhhhhhhhHHHHHHHHhhhhhhhhhh-----hhcchhhccc--chhhhhhhHHHHHHhhhhhh-h
Confidence 9986543221110 0000000111111100000 0000000 0000001000 01111121111111100000 1
Q ss_pred HHHHHHHH-hhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhh-hccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 162 ADVFLEFI-CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 162 ~~~~~~~~-~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
........ ..... ...+.++++++||++|+|++|.++|.+.... +++..+++++++++++||++++|+|++|++.|.
T Consensus 188 ~~~~~~~~~~~~~~-~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 266 (271)
T d1va4a_ 188 LKATVDCVTAFAET-DFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL 266 (271)
T ss_dssp HHHHHHHHHHHHHC-CCHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH
T ss_pred hhhhhhcccccchh-hhhhhhhhcccceeecccCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 11111111 11111 1234567899999999999999999877544 456677899999999999999999999999999
Q ss_pred HHHHh
Q 024900 240 SFVTR 244 (261)
Q Consensus 240 ~fl~~ 244 (261)
+||++
T Consensus 267 ~fL~k 271 (271)
T d1va4a_ 267 AFLKR 271 (271)
T ss_dssp HHHTC
T ss_pred HHHCc
Confidence 99975
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=9.1e-29 Score=195.09 Aligned_cols=149 Identities=18% Similarity=0.195 Sum_probs=119.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||||+|+.+... ..++....++++.++++.++.++++|+||||||.+++.+|.++|++++++|++
T Consensus 59 ~gy~via~D~~G~G~S~~~~~~-----~~~~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~ 133 (208)
T d1imja_ 59 AGYRAVAIDLPGLGHSKEAAAP-----APIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPV 133 (208)
T ss_dssp TTCEEEEECCTTSGGGTTSCCS-----SCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEE
T ss_pred cCCeEEEeecccccCCCCCCcc-----cccchhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeec
Confidence 5699999999999999865321 23455556778889999999999999999999999999999999999999988
Q ss_pred ecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHH
Q 024900 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (261)
++.... . ...
T Consensus 134 ~p~~~~-----------~-----------------------------------------~~~------------------ 143 (208)
T d1imja_ 134 APICTD-----------K-----------------------------------------INA------------------ 143 (208)
T ss_dssp SCSCGG-----------G-----------------------------------------SCH------------------
T ss_pred Cccccc-----------c-----------------------------------------ccc------------------
Confidence 752100 0 000
Q ss_pred HHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 165 FLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
+.+.++++|||+|+|++|.++|.+. +.+ +..+++++.+++++||.+++|+|++|++.+.+||++
T Consensus 144 --------------~~~~~i~~P~Lii~G~~D~~~~~~~-~~~-~~~~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 144 --------------ANYASVKTPALIVYGDQDPMGQTSF-EHL-KQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQG 207 (208)
T ss_dssp --------------HHHHTCCSCEEEEEETTCHHHHHHH-HHH-TTSSSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred --------------ccccccccccccccCCcCcCCcHHH-HHH-HhCCCCeEEEECCCCCchhhhCHHHHHHHHHHHHhc
Confidence 0123578999999999999877553 233 346778999999999999999999999999999975
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.95 E-value=5.9e-27 Score=190.92 Aligned_cols=232 Identities=18% Similarity=0.197 Sum_probs=129.3
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hcCCCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~-l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.|+++|+||++|+||||.|+++.... ...+......+++..++.. .+.+++++|||||||.+++.+|..+|++|.+
T Consensus 50 ~L~~~~~vi~~Dl~G~G~S~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 126 (298)
T d1mj5a_ 50 HCAGLGRLIACDLIGMGDSDKLDPSG---PERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQG 126 (298)
T ss_dssp GGTTSSEEEEECCTTSTTSCCCSSCS---TTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEE
T ss_pred HHhcCCEEEEEeCCCCCCCCCCcccc---ccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhhe
Confidence 47899999999999999998754211 1234555666666555444 4567899999999999999999999999999
Q ss_pred eEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 81 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
++++++............ . ............ ... .. ............. .. .....+..............
T Consensus 127 l~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 197 (298)
T d1mj5a_ 127 IAYMEAIAMPIEWADFPE---Q-DRDLFQAFRSQA-GEE-LV-LQDNVFVEQVLPG-LI-LRPLSEAEMAAYREPFLAAG 197 (298)
T ss_dssp EEEEEECCSCBCGGGSCG---G-GHHHHHHHHSTT-HHH-HH-TTTCHHHHTHHHH-TS-SSCCCHHHHHHHHGGGCSSS
T ss_pred eeccccccccccchhhhh---h-hhhhhhhhhhhh-hhh-hh-hhhhhhhhhhccc-cc-cccchhhhhhhhhhhhccch
Confidence 999987643321111110 0 000000000000 000 00 0000000000000 00 01111222211111111110
Q ss_pred h-HHHHHHHHhhcCC-----------CCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCC
Q 024900 161 A-ADVFLEFICYSGG-----------PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQD 228 (261)
Q Consensus 161 ~-~~~~~~~~~~~~~-----------~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 228 (261)
. ............. ....+.+..+++|+++++|++|.+.+.. .+.+.+..|+.+++++ ++||++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~-~~~~~~~~p~~~~~~~-~~GH~~~~ 275 (298)
T d1mj5a_ 198 EARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGR-MRDFCRTWPNQTEITV-AGAHFIQE 275 (298)
T ss_dssp GGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSHH-HHHHHTTCSSEEEEEE-EESSCGGG
T ss_pred hhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhhhhcceeEEEEecCCCCcChHH-HHHHHHHCCCCEEEEe-CCCCchHH
Confidence 0 0000000000000 0012346789999999999999876644 4556666777776655 67999999
Q ss_pred CChhhHHHHHHHHHHhcCC
Q 024900 229 EAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 229 e~p~~~~~~l~~fl~~~~~ 247 (261)
|+|++|++.|.+||++..+
T Consensus 276 e~P~~v~~~i~~fl~~~~~ 294 (298)
T d1mj5a_ 276 DSPDEIGAAIAAFVRRLRP 294 (298)
T ss_dssp TCHHHHHHHHHHHHHHHSC
T ss_pred hCHHHHHHHHHHHHhhhcc
Confidence 9999999999999998643
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.94 E-value=8.7e-27 Score=186.18 Aligned_cols=221 Identities=12% Similarity=0.088 Sum_probs=117.7
Q ss_pred cC-CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~-~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|+ .+|+|+++|+||||.|..+.. ..+.....+.+........+.++++++||||||.+++.+|+.+|+.+.++
T Consensus 39 L~~~g~~vi~~Dl~G~G~s~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~ 112 (264)
T d1r3da_ 39 LARTQCAALTLDLPGHGTNPERHC------DNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNL 112 (264)
T ss_dssp HTTSSCEEEEECCTTCSSCC-------------CHHHHHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEE
T ss_pred HHhCCCEEEEEecccccccccccc------cccchhhhhhhhcccccccccCceeeeeecchHHHHHHHHHhCchhcccc
Confidence 55 479999999999999976531 12333333444444444455678999999999999999999999999999
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCch
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (261)
+++....... ........ ................ ............... ......+..............
T Consensus 113 ~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 182 (264)
T d1r3da_ 113 RGAIIEGGHF------GLQENEEK-AARWQHDQQWAQRFSQ-QPIEHVLSDWYQQAV--FSSLNHEQRQTLIAQRSANLG 182 (264)
T ss_dssp EEEEEESCCC------CCCSHHHH-HHHHHHHHHHHHHHHH-SCHHHHHHHHTTSGG--GTTCCHHHHHHHHHHHTTSCH
T ss_pred ccccccCCCc------cccchhhh-hhhhhhhhhhhhhhhh-hhhhhhhhhhhhhhh--hcccchHHHHHHHHHHhhhhh
Confidence 9887543211 00011000 0000000000000000 000000000000000 011122222222111111111
Q ss_pred HH--HHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHH
Q 024900 162 AD--VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 239 (261)
Q Consensus 162 ~~--~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 239 (261)
.. ...............+.+..+++|+++|+|++|..+. .+.+ .+++++++|+++||++++|+|++|++.|.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~~-----~~~~-~~~~~~~~i~~~gH~~~~e~P~~~~~~i~ 256 (264)
T d1r3da_ 183 SSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAE-SSGLSYSQVAQAGHNVHHEQPQAFAKIVQ 256 (264)
T ss_dssp HHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHH-HHCSEEEEETTCCSCHHHHCHHHHHHHHH
T ss_pred hhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHHH-----HHHh-cCCCeEEEECCCCCchHHHCHHHHHHHHH
Confidence 11 1111111111112234567899999999999996432 1222 24679999999999999999999999999
Q ss_pred HHHHhc
Q 024900 240 SFVTRH 245 (261)
Q Consensus 240 ~fl~~~ 245 (261)
+||++.
T Consensus 257 ~fl~~l 262 (264)
T d1r3da_ 257 AMIHSI 262 (264)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999874
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.94 E-value=2.7e-26 Score=187.99 Aligned_cols=227 Identities=14% Similarity=0.085 Sum_probs=131.2
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.|+++|+||++|+||||.|+++.. ...|+...+++|+..+++.++.++++++||||||.+++.+|..+|++|.++
T Consensus 56 ~l~~~~~vi~~D~rG~G~S~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~ 130 (313)
T d1wm1a_ 56 FDPERYKVLLFDQRGCGRSRPHAS-----LDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEM 130 (313)
T ss_dssp SCTTTEEEEEECCTTSTTCBSTTC-----CTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HhhcCCEEEEEeCCCccccccccc-----ccccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheee
Confidence 578999999999999999986542 246889999999999999999999999999999999999999999999999
Q ss_pred EEeecchhhhh-h--ccCCCCCchhhHHHHHHhhhh-h------hhHHHHHhhc-ChHHHHHHH----HhhcCCCC-CCc
Q 024900 82 ILLNISLRMLH-I--KKQPWYGRPLIRSFQNLLRNT-A------AGKLFYKMVA-TSESVRNIL----CQCYNDTS-QVT 145 (261)
Q Consensus 82 v~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~-~~~~~~~~~----~~~~~~~~-~~~ 145 (261)
++++....... . ..................... . .......... ......... ........ ...
T Consensus 131 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (313)
T d1wm1a_ 131 VLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPS 210 (313)
T ss_dssp EEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCC
T ss_pred eecccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccc
Confidence 99986542210 0 000000000000000000000 0 0000000000 000000000 00000000 000
Q ss_pred HHHHHHHhccCCCCchHHHHH----HHHh---hcCCCC--ccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccE
Q 024900 146 EELVEKILQPGLETGAADVFL----EFIC---YSGGPL--PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF 216 (261)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~--~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~ 216 (261)
.... .. .......... .... ...... ....++.+++||++|+|++|.++|++.++.+++..|++++
T Consensus 211 ~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~p~a~~ 285 (313)
T d1wm1a_ 211 RESA-SF----GEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAEL 285 (313)
T ss_dssp GGGG-GG----GCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEE
T ss_pred hhhh-hh----hhhhHHhhhhhhhhhhhhhhcccccchhhhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHCCCCEE
Confidence 0000 00 0000000000 0000 000000 1234567899999999999999999988888888889999
Q ss_pred EEcCCCCCCCCCCChhhHHHHHHH
Q 024900 217 IVLPNVGHCPQDEAPHLVNPLVES 240 (261)
Q Consensus 217 ~~i~~~gH~~~~e~p~~~~~~l~~ 240 (261)
++|+++||++ ++|+.++++++.
T Consensus 286 ~~i~~aGH~~--~eP~~~~~lv~a 307 (313)
T d1wm1a_ 286 HIVEGAGHSY--DEPGILHQLMIA 307 (313)
T ss_dssp EEETTCCSST--TSHHHHHHHHHH
T ss_pred EEECCCCCCc--CCchHHHHHHHH
Confidence 9999999975 469988877664
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.92 E-value=8.9e-25 Score=187.95 Aligned_cols=233 Identities=12% Similarity=0.049 Sum_probs=132.7
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
..|+||++||||||.|++|.. ...|+...+++++..+++.++.++++++||||||.++..+++.+|+.+.+++++
T Consensus 138 ~~f~VIaPDLpG~G~S~~P~~-----~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~ 212 (394)
T d1qo7a_ 138 LPFHLVVPSLPGYTFSSGPPL-----DKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLN 212 (394)
T ss_dssp CCEEEEEECCTTSTTSCCCCS-----SSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEES
T ss_pred cceeeecccccccCCCCCCCC-----CCccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEe
Confidence 349999999999999998742 146899999999999999999999999999999999999999999999999998
Q ss_pred ecchhhhhhccCCCCCchh-hHHHHHH---hhhh-hh--------hHHHHHhhcChHHHHHHHHh---hcCCCCCCcHHH
Q 024900 85 NISLRMLHIKKQPWYGRPL-IRSFQNL---LRNT-AA--------GKLFYKMVATSESVRNILCQ---CYNDTSQVTEEL 148 (261)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~-~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 148 (261)
+.................. ...+... .... .. ..........+......... .+. ....+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~ 291 (394)
T d1qo7a_ 213 LCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWV-DKPLPSET 291 (394)
T ss_dssp CCCCCSCSSSCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSC-SSCCCHHH
T ss_pred eecccccccccccccchhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcc-cccCCHHH
Confidence 7654321100000000000 0000000 0000 00 00000000111111110000 111 11222222
Q ss_pred HHHH----hccCCCCchHHHHHHHHhhcC---CCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCC
Q 024900 149 VEKI----LQPGLETGAADVFLEFICYSG---GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPN 221 (261)
Q Consensus 149 ~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~ 221 (261)
+... ............+........ .........+|++||++++|++|...+++. ...+..+..++..+++
T Consensus 292 ~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~~--~~~~~~~~~~~~~~~~ 369 (394)
T d1qo7a_ 292 ILEMVSLYWLTESFPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPRS--WIATTGNLVFFRDHAE 369 (394)
T ss_dssp HHHHHHHHHHTTCHHHHGGGHHHHCC---------CTTTTTCEEEEEEEEECTBSSSCCCHH--HHGGGEEEEEEEECSS
T ss_pred HHHHHHHHhhccccchhHHHHHHHhhcccccchhhhhccCCcccCCeEEEEeCCCccccHHH--HHHhccCceEEEEcCC
Confidence 2111 110000001111111000000 000112345789999999999998766543 2233344457788999
Q ss_pred CCCCCCCCChhhHHHHHHHHHHhc
Q 024900 222 VGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 222 ~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
|||++++|+|++|++.|.+|+++.
T Consensus 370 ~GHf~~~E~Pe~~a~~I~~Fl~~v 393 (394)
T d1qo7a_ 370 GGHFAALERPRELKTDLTAFVEQV 393 (394)
T ss_dssp CBSCHHHHCHHHHHHHHHHHHHHH
T ss_pred cCCchHHhCHHHHHHHHHHHHHHh
Confidence 999999999999999999999873
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.92 E-value=1.9e-24 Score=182.67 Aligned_cols=241 Identities=12% Similarity=0.081 Sum_probs=128.8
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCC--CCCCCCCHHH-----HHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDF--FDKPFYTFET-----WASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~--~~~~~~~~~~-----~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
.++|+|+++|+||||.|+.+..... .....+++.+ +++++..+++.++.++++|+||||||++++.+|..+|+
T Consensus 89 ~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~ 168 (377)
T d1k8qa_ 89 DAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPK 168 (377)
T ss_dssp HTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHH
T ss_pred HCCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhh
Confidence 3789999999999999986432111 1112344544 44556666777788999999999999999999999999
Q ss_pred cccceEEeecchhhhhhccCCC-CCch--hhHHHHHHhhhh-------hhhHHHHHh----hcChHHHHHHHHhh-cCCC
Q 024900 77 ICRGMILLNISLRMLHIKKQPW-YGRP--LIRSFQNLLRNT-------AAGKLFYKM----VATSESVRNILCQC-YNDT 141 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~~~~~~~~~-~~~~ 141 (261)
.+++++++.............. .... ............ ......... .............. ..+.
T Consensus 169 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (377)
T d1k8qa_ 169 LAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDT 248 (377)
T ss_dssp HHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCG
T ss_pred hhhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCc
Confidence 9999998764322110000000 0000 000000000000 000000000 00000011111000 0001
Q ss_pred CCCcHHHHHHHhccCCCCchHHHHHH---------------------HHhhcCCCCccccCCCCCCCEEEEecCCCCCCC
Q 024900 142 SQVTEELVEKILQPGLETGAADVFLE---------------------FICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP 200 (261)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~ 200 (261)
...+...................... .............+++|++|||+|+|++|.+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~ 328 (377)
T d1k8qa_ 249 MNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLAD 328 (377)
T ss_dssp GGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSC
T ss_pred ccccHHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccC
Confidence 11111111111111100000011000 000111111123478899999999999999999
Q ss_pred chhhhhhccCCCCc-cEEEcCCCCCCC---CCCChhhHHHHHHHHHHh
Q 024900 201 IELGRAYGNFDSVE-DFIVLPNVGHCP---QDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 201 ~~~~~~~~~~~~~~-~~~~i~~~gH~~---~~e~p~~~~~~l~~fl~~ 244 (261)
++..+.+.+..|+. +.+.++++||+. -.+.|++|++.|.+||+.
T Consensus 329 ~~~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 329 PHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 98877777666554 778999999983 357799999999999975
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=8.9e-25 Score=175.35 Aligned_cols=74 Identities=19% Similarity=0.202 Sum_probs=67.8
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc-cccceEEe
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILL 84 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lv~~ 84 (261)
+|+|+++|+||||.|.++. .|+++++++|+.+++++++ ++++|+||||||.||+.+|.++|+ +|+++|++
T Consensus 31 ~~~v~~~d~~G~g~S~~~~--------~~~~~~~~~~l~~~l~~l~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~ 101 (268)
T d1pjaa_ 31 GTVVTVLDLFDGRESLRPL--------WEQVQGFREAVVPIMAKAP-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISL 101 (268)
T ss_dssp TCCEEECCSSCSGGGGSCH--------HHHHHHHHHHHHHHHHHCT-TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEE
T ss_pred CeEEEEeCCCCCCCCCCcc--------ccCHHHHHHHHHHHHhccC-CeEEEEccccHHHHHHHHHHHCCccccceEEEE
Confidence 6999999999999998752 3789999999999999988 999999999999999999999998 69999999
Q ss_pred ecch
Q 024900 85 NISL 88 (261)
Q Consensus 85 ~~~~ 88 (261)
+++.
T Consensus 102 ~~~~ 105 (268)
T d1pjaa_ 102 SSPQ 105 (268)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 8753
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.90 E-value=8.3e-23 Score=160.61 Aligned_cols=197 Identities=14% Similarity=0.165 Sum_probs=117.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN---DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~---~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
++|+|+++|+||||.|..+. ..++..+..+++. ..++..+.++++++||||||.+++.++..+|.. .+
T Consensus 37 ~G~~v~~~D~~G~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~~~~--~~ 107 (242)
T d1tqha_ 37 KGYTCHAPIYKGHGVPPEEL-------VHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIE--GI 107 (242)
T ss_dssp TTCEEEECCCTTSSSCHHHH-------TTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSCCS--CE
T ss_pred CCCEEEEEeCCCCccccccc-------cccchhHHHHHHHHHHhhhhhcccCceEEEEcchHHHHhhhhcccCccc--cc
Confidence 57999999999999997532 1234455544444 334566788999999999999999999999864 45
Q ss_pred EEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHH-hhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCc
Q 024900 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK-MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (261)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (261)
++++++.... .. ...+...... ...+.. ............ ...... ...
T Consensus 108 ~~~~~~~~~~---------~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---------------~~~~~~--~~~ 157 (242)
T d1tqha_ 108 VTMCAPMYIK---------SE-ETMYEGVLEY---AREYKKREGKSEEQIEQEM---------------EKFKQT--PMK 157 (242)
T ss_dssp EEESCCSSCC---------CH-HHHHHHHHHH---HHHHHHHHTCCHHHHHHHH---------------HHHTTS--CCT
T ss_pred cccccccccc---------ch-hHHHHHHHHH---HHHHhhhccchhhhHHHHH---------------hhhhhh--ccc
Confidence 5555432211 00 0001110000 000000 000010000000 000000 000
Q ss_pred hHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC--CCCccEEEcCCCCCCCCCC-ChhhHHHH
Q 024900 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDE-APHLVNPL 237 (261)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~--~~~~~~~~i~~~gH~~~~e-~p~~~~~~ 237 (261)
........... ....+..+++|||+++|++|..+|++..+.+.+. .++.++++++++||++++| +|+++++.
T Consensus 158 ~~~~~~~~~~~-----~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 232 (242)
T d1tqha_ 158 TLKALQELIAD-----VRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHED 232 (242)
T ss_dssp THHHHHHHHHH-----HHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHH
T ss_pred hhhcccccccc-----cccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHH
Confidence 00000000000 1234667899999999999999999887765543 3567899999999999976 59999999
Q ss_pred HHHHHHhc
Q 024900 238 VESFVTRH 245 (261)
Q Consensus 238 l~~fl~~~ 245 (261)
|.+||++.
T Consensus 233 i~~Fl~~l 240 (242)
T d1tqha_ 233 IYAFLESL 240 (242)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhC
Confidence 99999874
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.86 E-value=1.2e-20 Score=154.92 Aligned_cols=192 Identities=12% Similarity=0.113 Sum_probs=122.6
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHhcCCCeEEEEcChhHHHHHHHHhhCc----c
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLND-FCKDVVKDQAFFICNSIGGLVGLQAAVMEP----E 76 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~-~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p----~ 76 (261)
.|+.+++||++|+||||.|+.+... ....+++++++++.+ +...++.++++|+||||||.||+++|.+++ +
T Consensus 84 ~L~~~~~V~al~~pG~~~~~~~~~~----~~~~s~~~~a~~~~~~i~~~~~~~P~vL~GhS~GG~vA~e~A~~l~~~~g~ 159 (283)
T d2h7xa1 84 SFQEERDFLAVPLPGYGTGTGTGTA----LLPADLDTALDAQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGA 159 (283)
T ss_dssp TTTTTCCEEEECCTTCCBC---CBC----CEESSHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSC
T ss_pred hcCCCceEEEEeCCCCCCCCCCccc----cccCCHHHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHhhHHHcCC
Confidence 5788999999999999999864321 123589999988765 556667889999999999999999998754 5
Q ss_pred cccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccC
Q 024900 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (261)
Q Consensus 77 ~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
.|.+||++++.+... ......+..... ..... ......+...+..+.
T Consensus 160 ~v~~LvL~d~~~~~~---------~~~~~~~~~~~~------------------~~~~~---~~~~~~~~~~l~a~~--- 206 (283)
T d2h7xa1 160 PPAGIVLVDPYPPGH---------QEPIEVWSRQLG------------------EGLFA---GELEPMSDARLLAMG--- 206 (283)
T ss_dssp CCSEEEEESCCCTTC---------CHHHHHTHHHHH------------------HHHHH---TCSSCCCHHHHHHHH---
T ss_pred CceEEEEecCCcccc---------ccchhhhhhhhH------------------HHhhc---ccccccccHHHHHHH---
Confidence 799999999753211 000000000000 00000 011122222221110
Q ss_pred CCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCC-CCccEEEcCCCCCCCC-CCChhhH
Q 024900 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-SVEDFIVLPNVGHCPQ-DEAPHLV 234 (261)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~-~e~p~~~ 234 (261)
.+..+ .. ......+++||++|+|++|..++.+....+.+.. ...+++.+++ ||+.+ .|+|+.+
T Consensus 207 -------~~~~~--~~-----~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~v 271 (283)
T d2h7xa1 207 -------RYARF--LA-----GPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPG-DHFTMMRDHAPAV 271 (283)
T ss_dssp -------HHHHH--HH-----SCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEESS-CTTHHHHTTHHHH
T ss_pred -------HHHHH--Hh-----hccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEcC-CCcccccCCHHHH
Confidence 11111 11 1224678999999999999988877655555543 3357888886 89965 5789999
Q ss_pred HHHHHHHHHhc
Q 024900 235 NPLVESFVTRH 245 (261)
Q Consensus 235 ~~~l~~fl~~~ 245 (261)
++.|.+||++.
T Consensus 272 A~~i~~~L~~l 282 (283)
T d2h7xa1 272 AEAVLSWLDAI 282 (283)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999863
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.82 E-value=1.2e-19 Score=150.21 Aligned_cols=187 Identities=12% Similarity=0.068 Sum_probs=105.5
Q ss_pred CCCCeEEEecCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 4 AKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
+.+|+|+++|+||| |.|+... ..+++.++.+|+..+++.+ +.+++.|+||||||.+++.+|.. ..++
T Consensus 57 ~~G~~Vi~~D~rGh~G~S~g~~-------~~~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~ 127 (302)
T d1thta_ 57 TNGFHVFRYDSLHHVGLSSGSI-------DEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELS 127 (302)
T ss_dssp TTTCCEEEECCCBCC---------------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCS
T ss_pred HCCCEEEEecCCCCCCCCCCcc-------cCCCHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccc
Confidence 46899999999998 8987532 3478889998988776665 46799999999999999998864 3588
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|+..+..... ......+...... ......... ..+....................
T Consensus 128 ~li~~~g~~~~~-------------~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~- 184 (302)
T d1thta_ 128 FLITAVGVVNLR-------------DTLEKALGFDYLS-LPIDELPND--------LDFEGHKLGSEVFVRDCFEHHWD- 184 (302)
T ss_dssp EEEEESCCSCHH-------------HHHHHHHSSCGGG-SCGGGCCSE--------EEETTEEEEHHHHHHHHHHTTCS-
T ss_pred eeEeecccccHH-------------HHHHHHHhhccch-hhhhhcccc--------ccccccchhhHHHHHHHHHhHHH-
Confidence 998877543211 0011110000000 000000000 00000000000111111100000
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC--CCCccEEEcCCCCCCCCCCChhhHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQDEAPHLVNP 236 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~--~~~~~~~~i~~~gH~~~~e~p~~~~~ 236 (261)
..+. ..+.+.+|++|+|+++|++|.++|++.++.+.+. .+++++++++|+||.+. |+|+.+..
T Consensus 185 -~~~~------------~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~~~~ 249 (302)
T d1thta_ 185 -TLDS------------TLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRN 249 (302)
T ss_dssp -SHHH------------HHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHH
T ss_pred -HHHH------------HHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc-cChHHHHH
Confidence 0000 1134678999999999999999999987765543 24679999999999965 56665443
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.82 E-value=5.7e-20 Score=155.38 Aligned_cols=234 Identities=14% Similarity=0.131 Sum_probs=137.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCC--CC--------CCCCCCCHHHHHHHHHHHHHHhcCCCe-EEEEcChhHHHHHHHHhh
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPR--DF--------FDKPFYTFETWASQLNDFCKDVVKDQA-FFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~--~~--------~~~~~~~~~~~a~dl~~~~~~l~~~~~-~lvGhS~Gg~va~~~a~~ 73 (261)
.+|.||++|.+|-|.+..++.. +. .+-..+|+.|+++....++++||++++ .+||.||||+.|+++|..
T Consensus 76 ~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~ 155 (376)
T d2vata1 76 SRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFF 155 (376)
T ss_dssp TTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGG
T ss_pred cceEEEEeccCCCCcCCCCCCCCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHh
Confidence 6799999999998865432211 10 012357999999999999999999996 588999999999999999
Q ss_pred CcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhh------------------hh-HHHHHhhcChHHHHHHH
Q 024900 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA------------------AG-KLFYKMVATSESVRNIL 134 (261)
Q Consensus 74 ~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~-~~~~~~~~~~~~~~~~~ 134 (261)
||++|.++|.+++..+... +. ..+.+..+..+...+ .. ........+++.+.+.+
T Consensus 156 ~Pd~v~~li~Ia~~~~~s~-----~~-~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf 229 (376)
T d2vata1 156 GPEYVRKIVPIATSCRQSG-----WC-AAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERF 229 (376)
T ss_dssp CTTTBCCEEEESCCSBCCH-----HH-HHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHS
T ss_pred chHHHhhhcccccccccch-----HH-HHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999987653210 00 000000000000000 00 00011111222221111
Q ss_pred HhhcCC--CC--------------------------CCcHHHHHHHhccCCCCchHHHHHHHH-hhcCCCC-------cc
Q 024900 135 CQCYND--TS--------------------------QVTEELVEKILQPGLETGAADVFLEFI-CYSGGPL-------PE 178 (261)
Q Consensus 135 ~~~~~~--~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~ 178 (261)
...... .. ...+.++..........-....+..+. ++...+. ..
T Consensus 230 ~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~ 309 (376)
T d2vata1 230 HMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIP 309 (376)
T ss_dssp CCCCCCC---------------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHH
T ss_pred hhccccccccccccchhhhcccccccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHH
Confidence 000000 00 000111111111000011112222211 1211111 12
Q ss_pred ccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcC-CCCCCCCCCChhhHHHHHHHHHHh
Q 024900 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP-NVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 179 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~-~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
+.|++|++|+|+|.++.|.+.|++..+.+.+..+++++.+|+ ..||...+.+++.+++.|+.||++
T Consensus 310 ~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 310 EALAMITQPALIICARSDGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred HHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhcCCCeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 348899999999999999999999877777777889999998 679987777899999999999964
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.79 E-value=4.9e-19 Score=139.66 Aligned_cols=183 Identities=13% Similarity=0.029 Sum_probs=104.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-cCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
|+ +|+|+++|++|+|.+ .++++++| .++ +.++++|+||||||.||+++|.++|+++..+
T Consensus 40 L~-~~~v~~~~~~g~~~~---------------a~~~~~~i----~~~~~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v 99 (230)
T d1jmkc_ 40 LP-SYKLCAFDFIEEEDR---------------LDRYADLI----QKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIV 99 (230)
T ss_dssp CT-TEEEEEECCCCSTTH---------------HHHHHHHH----HHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCE
T ss_pred CC-CCEEeccCcCCHHHH---------------HHHHHHHH----HHhCCCCcEEEEeeccChHHHHHHHHhhhhhCccc
Confidence 54 699999999998743 24444443 344 4578999999999999999999988876666
Q ss_pred EEee---cchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCC-CcHHHHHHHhccCC
Q 024900 82 ILLN---ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ-VTEELVEKILQPGL 157 (261)
Q Consensus 82 v~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 157 (261)
+.+. +....................+... ...... ..+.....+..
T Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~--- 149 (230)
T d1jmkc_ 100 QRIIMVDSYKKQGVSDLDGRTVESDVEALMNV---------------------------NRDNEALNSEAVKHGLKQ--- 149 (230)
T ss_dssp EEEEEESCCEECCCC--------CCHHHHHHH---------------------------TTTCSGGGSHHHHHHHHH---
T ss_pred eeeecccccCccchhhhhhhhhhhhhhhhhhc---------------------------cccccccccHHHHHHHHH---
Confidence 5443 2211100000000000000000000 000000 11111111100
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCCh--hhHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAP--HLVN 235 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p--~~~~ 235 (261)
....+..... .......+++|+++|+|++|..++.....+......+.+++.+++ ||+.++++| ++++
T Consensus 150 ---~~~~~~~~~~------~~~~~~~i~~p~l~i~g~~D~~~~~~~~~w~~~~~~~~~~~~i~g-~H~~ml~~~~~~~va 219 (230)
T d1jmkc_ 150 ---KTHAFYSYYV------NLISTGQVKADIDLLTSGADFDIPEWLASWEEATTGAYRMKRGFG-THAEMLQGETLDRNA 219 (230)
T ss_dssp ---HHHHHHHHHH------HCCCCSCBSSEEEEEECSSCCCCCTTEECSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHH
T ss_pred ---HHHHHHHhhh------cccccccccCcceeeeecCCcccchhHHHHHHhccCCcEEEEEcC-CChhhcCCccHHHHH
Confidence 0001101000 112356789999999999999988765443333445568888875 999999877 8999
Q ss_pred HHHHHHHHhc
Q 024900 236 PLVESFVTRH 245 (261)
Q Consensus 236 ~~l~~fl~~~ 245 (261)
++|.+||++.
T Consensus 220 ~~I~~~L~~~ 229 (230)
T d1jmkc_ 220 GILLEFLNTQ 229 (230)
T ss_dssp HHHHHHHTCB
T ss_pred HHHHHHHhhc
Confidence 9999999763
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.78 E-value=2.1e-18 Score=146.03 Aligned_cols=186 Identities=18% Similarity=0.185 Sum_probs=114.8
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc---CCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
++.+|.|+++|+||||.|..... ...++..++..+.+++..+. .+++.|+||||||.+++.+|+.+| +|+
T Consensus 155 ~~~G~~vl~~D~~G~G~s~~~~~------~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~ 227 (360)
T d2jbwa1 155 LDRGMATATFDGPGQGEMFEYKR------IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLA 227 (360)
T ss_dssp HHTTCEEEEECCTTSGGGTTTCC------SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCC
T ss_pred HhcCCEEEEEccccccccCcccc------ccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-Ccc
Confidence 35789999999999999975321 12356666777777666543 367999999999999999999887 689
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|.+++..... .. .. ..+.....+. .... ....++..
T Consensus 228 a~V~~~~~~~~~------~~--~~---------~~~~~~~~~~-------------~~~~--~~~~~~~~---------- 265 (360)
T d2jbwa1 228 ACISWGGFSDLD------YW--DL---------ETPLTKESWK-------------YVSK--VDTLEEAR---------- 265 (360)
T ss_dssp EEEEESCCSCST------TG--GG---------SCHHHHHHHH-------------HHTT--CSSHHHHH----------
T ss_pred eEEEEcccccHH------HH--hh---------hhhhhhHHHH-------------Hhcc--CCchHHHH----------
Confidence 998887642210 00 00 0000000000 0000 00001100
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCC--CccEEEcCCCCCCCCCCChhhHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQDEAPHLVNPL 237 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~ 237 (261)
....... .....+.+|+||+|+|+|++|. +|.+.++.+.+..+ ..+++++++++|.. .+.+.+....
T Consensus 266 ------~~~~~~~---~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~ 334 (360)
T d2jbwa1 266 ------LHVHAAL---ETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLE 334 (360)
T ss_dssp ------HHHHHHT---CCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHH
T ss_pred ------HHHHhhc---chhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCC-CcChHHHHHH
Confidence 0000000 1123467899999999999998 57776655544332 34677789999964 5677788888
Q ss_pred HHHHHHhcCCC
Q 024900 238 VESFVTRHATP 248 (261)
Q Consensus 238 l~~fl~~~~~~ 248 (261)
+.+||.++...
T Consensus 335 i~dWl~~~L~~ 345 (360)
T d2jbwa1 335 MADWLYDVLVA 345 (360)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHhcc
Confidence 88999886543
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.78 E-value=5.2e-18 Score=133.31 Aligned_cols=147 Identities=16% Similarity=0.093 Sum_probs=107.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
+.+|.|+.||+||+|.|..... +...+++|+...++.+ ..++++++||||||.+++.+|... .++
T Consensus 65 ~~G~~vlrfd~RG~G~S~g~~~---------~~~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~ 133 (218)
T d2fuka1 65 ELGITVVRFNFRSVGTSAGSFD---------HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQ 133 (218)
T ss_dssp TTTCEEEEECCTTSTTCCSCCC---------TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCS
T ss_pred HcCCeEEEeecCCCccCCCccC---------cCcchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccc
Confidence 5689999999999999975421 2234455655554433 457899999999999999998864 478
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
++|+++++... + +
T Consensus 134 ~lil~ap~~~~-----------------------------------------------~-~------------------- 146 (218)
T d2fuka1 134 VLISIAPPAGR-----------------------------------------------W-D------------------- 146 (218)
T ss_dssp EEEEESCCBTT-----------------------------------------------B-C-------------------
T ss_pred eEEEeCCcccc-----------------------------------------------h-h-------------------
Confidence 88887753100 0 0
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhc-cCCCCccEEEcCCCCCCCCCCChhhHHHHH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG-NFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 238 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l 238 (261)
. ....+.+|+|+|+|++|.++|++..+.+. +.....++++|||++|+.. .+-+++.+.+
T Consensus 147 ----------------~---~~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f~-~~~~~l~~~~ 206 (218)
T d2fuka1 147 ----------------F---SDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFH-RKLIDLRGAL 206 (218)
T ss_dssp ----------------C---TTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCT-TCHHHHHHHH
T ss_pred ----------------h---hccccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCCC-CCHHHHHHHH
Confidence 0 01135689999999999999998876654 4455578999999999855 4446799999
Q ss_pred HHHHHhcCCC
Q 024900 239 ESFVTRHATP 248 (261)
Q Consensus 239 ~~fl~~~~~~ 248 (261)
.+|+++..+.
T Consensus 207 ~~~v~~~l~~ 216 (218)
T d2fuka1 207 QHGVRRWLPA 216 (218)
T ss_dssp HHHHGGGCSS
T ss_pred HHHHHHhcCC
Confidence 9999987654
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.77 E-value=4.6e-18 Score=142.62 Aligned_cols=234 Identities=12% Similarity=0.007 Sum_probs=134.0
Q ss_pred CCCeEEEecCCCCCCCCCCCCCC--C------CCCCCCCHHHHHHHHHHHHHHhcCCCe-EEEEcChhHHHHHHHHhhCc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRD--F------FDKPFYTFETWASQLNDFCKDVVKDQA-FFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~--~------~~~~~~~~~~~a~dl~~~~~~l~~~~~-~lvGhS~Gg~va~~~a~~~p 75 (261)
++|.||++|++|.|.+..++... . .+...+|+.++++....++++||++++ .+||.||||+.|+++|.+||
T Consensus 77 ~kyfVI~~n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~P 156 (357)
T d2b61a1 77 DRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYP 156 (357)
T ss_dssp TTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHST
T ss_pred CceEEEEecccCCccccCCcCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhh
Confidence 56999999999987754332110 0 012357999999999999999999997 56799999999999999999
Q ss_pred ccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhh------------------hhHHH-HHhhcChHHHHHHHHh
Q 024900 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA------------------AGKLF-YKMVATSESVRNILCQ 136 (261)
Q Consensus 76 ~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~-~~~~~~~~~~~~~~~~ 136 (261)
+.|+++|.+++..+... + ...+.+..+..+...+ ..+.+ .....++..+.+.+..
T Consensus 157 d~v~~~i~i~~~a~~s~-----~-~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r 230 (357)
T d2b61a1 157 DFMDNIVNLCSSIYFSA-----E-AIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGR 230 (357)
T ss_dssp TSEEEEEEESCCSSCCH-----H-HHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTT
T ss_pred HHHhhhcccccccccch-----h-HHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhcc
Confidence 99999999987643210 0 0000000111111000 00000 0011122222111111
Q ss_pred hcCCC-----CCC-cHHHHHHHhccCCCCchHHHHHHH-HhhcCCC------CccccCCCCCCCEEEEecCCCCCCCchh
Q 024900 137 CYNDT-----SQV-TEELVEKILQPGLETGAADVFLEF-ICYSGGP------LPEELLPQVKCPVLIAWGDKDPWEPIEL 203 (261)
Q Consensus 137 ~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~l~~i~~Pvlii~G~~D~~~~~~~ 203 (261)
..... ... .+.+++..-......-....+..+ .++...+ ...+.|++|++|||+|..+.|.+.|++.
T Consensus 231 ~~~~~~~~~~~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~ 310 (357)
T d2b61a1 231 ATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPID 310 (357)
T ss_dssp CBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHH
T ss_pred ccccccccccchhhHHHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHH
Confidence 00000 001 122222211111111111222211 1111111 1124589999999999999999999876
Q ss_pred hhhhcc----CCCCccEEEcCCC-CCCCCCCChhhHHHHHHHHHHh
Q 024900 204 GRAYGN----FDSVEDFIVLPNV-GHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 204 ~~~~~~----~~~~~~~~~i~~~-gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
.+...+ ...++++.+|+.. ||...+.+++++.+.|++||+.
T Consensus 311 ~~~~a~~l~~~~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 311 LYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCeEEEEECCCCCccccCcCHHHHHHHHHHHHcc
Confidence 544333 3344688888766 9998888899999999999975
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=6e-18 Score=135.95 Aligned_cols=68 Identities=13% Similarity=-0.009 Sum_probs=51.5
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLND-FCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~-~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
+++||++|+||||.|+ ++++.+++..+ +.+.++.++++|+||||||.||+++|.++|+++.+++++
T Consensus 49 ~~~v~~~d~~g~~~~~-------------~~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l 115 (286)
T d1xkta_ 49 SIPTYGLQCTRAAPLD-------------SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTH 115 (286)
T ss_dssp SSCEEEECCCTTSCCS-------------CHHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------C
T ss_pred CCeEEEEeCCCCCCCC-------------CHHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeE
Confidence 5899999999999985 35666766654 444456789999999999999999999999999998877
Q ss_pred ec
Q 024900 85 NI 86 (261)
Q Consensus 85 ~~ 86 (261)
+.
T Consensus 116 ~~ 117 (286)
T d1xkta_ 116 NS 117 (286)
T ss_dssp CE
T ss_pred EE
Confidence 64
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.76 E-value=1e-17 Score=140.80 Aligned_cols=234 Identities=12% Similarity=0.073 Sum_probs=134.9
Q ss_pred CCCeEEEecCCCCCCCCCCCCCC--CC------CCCCCCHHHHHHHHHHHHHHhcCCCeE-EEEcChhHHHHHHHHhhCc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRD--FF------DKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~--~~------~~~~~~~~~~a~dl~~~~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p 75 (261)
++|.||++|+.|-|.|..++-.. .. .....++.++++....++++||++++. +||.||||+.|+++|..||
T Consensus 84 ~~yfVI~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yP 163 (362)
T d2pl5a1 84 NQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYP 163 (362)
T ss_dssp TTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHST
T ss_pred cccEEEeeccccCcccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCc
Confidence 56999999999998876543111 00 112368999999999999999999977 7799999999999999999
Q ss_pred ccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhh-----------------hhHH-HHHhhcChHHHHHHHHhh
Q 024900 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA-----------------AGKL-FYKMVATSESVRNILCQC 137 (261)
Q Consensus 76 ~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-~~~~~~~~~~~~~~~~~~ 137 (261)
+.|+++|.+++..+.. ++ ...+.+..+..+...+ ..+. ......+++...+.+...
T Consensus 164 d~v~~~v~ia~sa~~s-----~~-~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~ 237 (362)
T d2pl5a1 164 NSLSNCIVMASTAEHS-----AM-QIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRN 237 (362)
T ss_dssp TSEEEEEEESCCSBCC-----HH-HHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTS
T ss_pred hHhhhhcccccccccC-----HH-HHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccc
Confidence 9999999999765321 00 0001111111111100 0000 001112233332222111
Q ss_pred cCCCCCC-cHHHHHHHhc----cCCCCchHHHHHHHH-hhcCCCCc-----cccCCCCCCCEEEEecCCCCCCCchhhhh
Q 024900 138 YNDTSQV-TEELVEKILQ----PGLETGAADVFLEFI-CYSGGPLP-----EELLPQVKCPVLIAWGDKDPWEPIELGRA 206 (261)
Q Consensus 138 ~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~-----~~~l~~i~~Pvlii~G~~D~~~~~~~~~~ 206 (261)
....... ....++.++. .....-....+..+. ++...+.. .+.|++|++|||+|..+.|.+.|++..+.
T Consensus 238 ~~~~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~ 317 (362)
T d2pl5a1 238 PPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSRE 317 (362)
T ss_dssp CCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHH
T ss_pred cccccccchhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHH
Confidence 1000000 0000111111 111111122222221 11111111 13488999999999999999999987665
Q ss_pred hccCCCC----ccEEEc-CCCCCCCCCCChhhHHHHHHHHHHh
Q 024900 207 YGNFDSV----EDFIVL-PNVGHCPQDEAPHLVNPLVESFVTR 244 (261)
Q Consensus 207 ~~~~~~~----~~~~~i-~~~gH~~~~e~p~~~~~~l~~fl~~ 244 (261)
..+..|+ .++++| -..||..++.+++++.+.|+.||++
T Consensus 318 ~a~~l~~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 318 IVKSLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp HHHHHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCeEEEEeCCCCCcchhccCHHHHHHHHHHHHcC
Confidence 5544333 345545 5679999999999999999999974
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.73 E-value=3.1e-18 Score=121.79 Aligned_cols=66 Identities=20% Similarity=0.329 Sum_probs=60.5
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 76 (261)
.|+++|+|+++|+||||.|++|+ ++.+++++++.++++++++++++++||||||.|++++++..++
T Consensus 37 ~L~~~yrvi~~DlpG~G~S~~p~---------~s~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 37 ALPEGYAFYLLDLPGYGRTEGPR---------MAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp CCCTTSEEEEECCTTSTTCCCCC---------CCHHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred cccCCeEEEEEeccccCCCCCcc---------cccchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 57899999999999999998642 6899999999999999999999999999999999999997544
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.73 E-value=5.8e-18 Score=129.64 Aligned_cols=156 Identities=12% Similarity=0.109 Sum_probs=102.7
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEE
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 83 (261)
+++|+|+++|+||+|.+ ..++|++.+....+ ...++++|+||||||.+++.++..+|+.....++
T Consensus 28 ~~G~~v~~~d~p~~~~~--------------~~~~~~~~l~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l 92 (186)
T d1uxoa_ 28 ADGVQADILNMPNPLQP--------------RLEDWLDTLSLYQH-TLHENTYLVAHSLGCPAILRFLEHLQLRAALGGI 92 (186)
T ss_dssp HTTCEEEEECCSCTTSC--------------CHHHHHHHHHTTGG-GCCTTEEEEEETTHHHHHHHHHHTCCCSSCEEEE
T ss_pred hCCCEEEEeccCCCCcc--------------hHHHHHHHHHHHHh-ccCCCcEEEEechhhHHHHHHHHhCCccceeeEE
Confidence 36899999999999966 25677777665443 3357899999999999999999999876555544
Q ss_pred eecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHH
Q 024900 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (261)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (261)
+...+... . .... ..... +..... ..
T Consensus 93 ~~~~~~~~------~--~~~~----------~~~~~------------------~~~~~~-~~----------------- 118 (186)
T d1uxoa_ 93 ILVSGFAK------S--LPTL----------QMLDE------------------FTQGSF-DH----------------- 118 (186)
T ss_dssp EEETCCSS------C--CTTC----------GGGGG------------------GTCSCC-CH-----------------
T ss_pred eecccccc------c--chhh----------hhhhh------------------hhcccc-cc-----------------
Confidence 44321110 0 0000 00000 000000 00
Q ss_pred HHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCC---hhhHHHHHHH
Q 024900 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA---PHLVNPLVES 240 (261)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~---p~~~~~~l~~ 240 (261)
.....+++|+++|+|++|.++|.+.++.+.+.. ++++++++++||+...+. -.++.+.|++
T Consensus 119 ---------------~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~ 182 (186)
T d1uxoa_ 119 ---------------QKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTS 182 (186)
T ss_dssp ---------------HHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHHHH
T ss_pred ---------------cccccCCCCEEEEecCCCCCCCHHHHHHHHHHc-CCEEEEeCCCCCcCccccCcccHHHHHHHHH
Confidence 001123579999999999999999887776655 479999999999876542 2357788999
Q ss_pred HHHh
Q 024900 241 FVTR 244 (261)
Q Consensus 241 fl~~ 244 (261)
|+.+
T Consensus 183 ~~~~ 186 (186)
T d1uxoa_ 183 YFSK 186 (186)
T ss_dssp HHHC
T ss_pred HHcC
Confidence 9864
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.71 E-value=2.3e-16 Score=127.10 Aligned_cols=183 Identities=11% Similarity=0.097 Sum_probs=112.4
Q ss_pred CcCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hcCCCeEEEEcChhHHHHHHHHhhCc---cc
Q 024900 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VVKDQAFFICNSIGGLVGLQAAVMEP---EI 77 (261)
Q Consensus 2 ~L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~-l~~~~~~lvGhS~Gg~va~~~a~~~p---~~ 77 (261)
.|..++.||++|+||||.++.+. .+++++++++.+.|.. +...+++|+||||||.||+++|.+.+ +.
T Consensus 66 ~L~~~~~V~al~~pG~~~~e~~~---------~s~~~~a~~~~~~i~~~~~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~ 136 (255)
T d1mo2a_ 66 ALRGIAPVRAVPQPGYEEGEPLP---------SSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHP 136 (255)
T ss_dssp HHTTTCCEEEECCTTSSTTCCEE---------SSHHHHHHHHHHHHHHTTSSSCEEEEECSTTHHHHHHHHHHHHHHTCC
T ss_pred hcCCCceEEEEeCCCcCCCCCCC---------CCHHHHHHHHHHHHHHhCCCCCEEEEEeCCcHHHHHHHHHhhHhcCCC
Confidence 36778999999999999987532 4899999998866644 45678999999999999999998764 45
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
|.+||++++..... ......+...+. ..... ......++..+..+.
T Consensus 137 v~~lvlld~~~p~~---------~~~~~~~~~~~~---------~~~~~------------~~~~~~~~~~l~a~~---- 182 (255)
T d1mo2a_ 137 PRGVVLIDVYPPGH---------QDAMNAWLEELT---------ATLFD------------RETVRMDDTRLTALG---- 182 (255)
T ss_dssp CSEEEEEECSCSSH---------HHHHHHHHHHHH---------TTCC----------------CCCCHHHHHHHH----
T ss_pred ccEEEEECCCCCCC---------ccchhhHHHHHH---------HHhhc------------cccccCCHHHHHHHH----
Confidence 99999999743210 000000000000 00000 001112222221111
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccC-CCCccEEEcCCCCCCCC-CCChhhHH
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQ-DEAPHLVN 235 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~-~e~p~~~~ 235 (261)
.+..+.. ......+++|++++.+++|..... .. ...+. ....+++.+++ +|+.+ .++++.++
T Consensus 183 ------~~~~~~~-------~~~~~~~~~p~l~v~a~~~~~~~~-~~-~w~~~~~~~~~~~~v~G-~H~~ml~~~~~~~A 246 (255)
T d1mo2a_ 183 ------AYDRLTG-------QWRPRETGLPTLLVSAGEPMGPWP-DD-SWKPTWPFEHDTVAVPG-DHFTMVQEHADAIA 246 (255)
T ss_dssp ------HHHHHHH-------HCCCCCCCCCEEEEECCSSSSCCT-TC-CCCCCCCSSCEEEECCS-CCSSCSSCCHHHHH
T ss_pred ------HHHHHHh-------cCCCccccceEEEeecCCCCCcch-hh-HHHHhCCCCcEEEEECC-CCcccccccHHHHH
Confidence 1111110 011346889999999998754332 22 22332 34468888876 89954 46899999
Q ss_pred HHHHHHHH
Q 024900 236 PLVESFVT 243 (261)
Q Consensus 236 ~~l~~fl~ 243 (261)
++|++||.
T Consensus 247 ~~i~~~L~ 254 (255)
T d1mo2a_ 247 RHIDAWLG 254 (255)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 99999984
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.66 E-value=2.2e-16 Score=120.37 Aligned_cols=145 Identities=12% Similarity=0.033 Sum_probs=111.1
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC--cccccceE
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME--PEICRGMI 82 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lv 82 (261)
++|+|+.+|.+|+|.+.... .++.+.+++++.+++++++.++++||||||||.++..++..+ |++|+++|
T Consensus 28 ~g~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V 99 (179)
T d1ispa_ 28 QGWSRDKLYAVDFWDKTGTN--------YNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 99 (179)
T ss_dssp TTCCGGGEEECCCSCTTCCH--------HHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEE
T ss_pred cCCeEEEEecCCcccccccc--------chhhhhHHHHHHHHHHhcCCceEEEEeecCcCHHHHHHHHHcCCchhhCEEE
Confidence 56999999999999996532 246677888888888889999999999999999999999876 78999999
Q ss_pred EeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchH
Q 024900 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (261)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
+++++.... .. . . +
T Consensus 100 ~l~~p~~g~----------~~------------------~-----------------~---l------------------ 113 (179)
T d1ispa_ 100 TLGGANRLT----------TG------------------K-----------------A---L------------------ 113 (179)
T ss_dssp EESCCGGGT----------CS------------------B-----------------C---C------------------
T ss_pred EECCCCCCc----------hh------------------h-----------------h---c------------------
Confidence 998753210 00 0 0 0
Q ss_pred HHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHH
Q 024900 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 242 (261)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 242 (261)
........+|++.|+|+.|.++++..+ ..++++.+.++++||.....+| ++.+.+.+||
T Consensus 114 ---------------~~~~~~~~~~~~~i~~~~D~~v~~~~~-----~l~~~~~~~~~~~~H~~l~~~~-~v~~~i~~~L 172 (179)
T d1ispa_ 114 ---------------PGTDPNQKILYTSIYSSADMIVMNYLS-----RLDGARNVQIHGVGHIGLLYSS-QVNSLIKEGL 172 (179)
T ss_dssp ---------------CCSCTTCCCEEEEEEETTCSSSCHHHH-----CCBTSEEEEESSCCTGGGGGCH-HHHHHHHHHH
T ss_pred ---------------CCcccccCceEEEEEecCCcccCchhh-----cCCCceEEEECCCCchhhccCH-HHHHHHHHHH
Confidence 000112357999999999999987643 2456788899999999888888 5788899999
Q ss_pred Hh
Q 024900 243 TR 244 (261)
Q Consensus 243 ~~ 244 (261)
+.
T Consensus 173 ~~ 174 (179)
T d1ispa_ 173 NG 174 (179)
T ss_dssp TT
T ss_pred hc
Confidence 64
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.60 E-value=2.1e-18 Score=141.97 Aligned_cols=209 Identities=18% Similarity=0.169 Sum_probs=109.0
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCccc-cc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEI-CR 79 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~-v~ 79 (261)
++++|+||++|+||||+|.++. ..++...+++++.++++.+.. .+..++|||+||.++..++..++.. +.
T Consensus 89 ~~~Gy~V~~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~ 161 (318)
T d1qlwa_ 89 LRKGYSTYVIDQSGRGRSATDI-------SAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQ 161 (318)
T ss_dssp HHTTCCEEEEECTTSTTSCCCC-------HHHHHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGH
T ss_pred HhCCCEEEEecCCCCCCCCCcc-------ccCCHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccc
Confidence 5689999999999999998643 123455555555555544433 3577889999999999988766433 33
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
.+++.+..+.... ... ................. ...... ... . ....+......+....
T Consensus 162 ~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~------~~~~~~----------~~~-~-~~~~~~~~~~~~~~~~ 220 (318)
T d1qlwa_ 162 AELWQQMVPDWLG--SMP-TPNPTVANLSKLAIKLD------GTVLLS----------HSQ-S-GIYPFQTAAMNPKGIT 220 (318)
T ss_dssp HHHHHHCCCBCGG--GSC-SSCHHHHHHHHHHHHHT------SEEEEE----------EGG-G-TTHHHHHHHHCCTTEE
T ss_pred eeeEecccccccc--chh-hhhhhHHHHHHHHhhhc------cccchh----------hhc-c-cchhhhhhhhhhhHHH
Confidence 3332222111100 000 00011111100000000 000000 000 0 0000000000000000
Q ss_pred chHHHHHHHHhh--cCCCCccccCCCCCCCEEEEecCCCCCCCchhh---------hhhccCCCCccEEEcC-----CCC
Q 024900 160 GAADVFLEFICY--SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG---------RAYGNFDSVEDFIVLP-----NVG 223 (261)
Q Consensus 160 ~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~---------~~~~~~~~~~~~~~i~-----~~g 223 (261)
. .... .........+..+++|+|+++|++|..+|.... ..+.+...+.++..+| |+|
T Consensus 221 ~-------~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~g 293 (318)
T d1qlwa_ 221 A-------IVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNS 293 (318)
T ss_dssp E-------EEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCC
T ss_pred H-------HHhhhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCCcEEEEecccccCCCc
Confidence 0 0000 000112234567899999999999999985431 2244445567787765 678
Q ss_pred CCCCCCCh-hhHHHHHHHHHHhcC
Q 024900 224 HCPQDEAP-HLVNPLVESFVTRHA 246 (261)
Q Consensus 224 H~~~~e~p-~~~~~~l~~fl~~~~ 246 (261)
|+++.|.+ +++++.|.+||+++.
T Consensus 294 H~~~~e~~~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 294 HMMMQDRNNLQVADLILDWIGRNT 317 (318)
T ss_dssp TTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred CccccCcCHHHHHHHHHHHHHhcc
Confidence 99998875 899999999999864
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.58 E-value=2.4e-14 Score=117.48 Aligned_cols=63 Identities=22% Similarity=0.213 Sum_probs=47.5
Q ss_pred cCCCCCCCEEEEecCCCCCCCchhhhhh-ccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcC
Q 024900 180 LLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 180 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~ 246 (261)
.+.+|++|+|+|+|++|.++|++.+..+ .++....++.+++++||... +++.+.+.+|+++++
T Consensus 253 ~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~~----~~~~~~~~~fl~~~L 316 (318)
T d1l7aa_ 253 LADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYI----PAFQTEKLAFFKQIL 316 (318)
T ss_dssp HGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCC----HHHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCCc----HHHHHHHHHHHHHhC
Confidence 3567899999999999999999877655 34544578999999999754 445555666766653
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.57 E-value=4.3e-14 Score=111.55 Aligned_cols=79 Identities=11% Similarity=0.051 Sum_probs=50.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-------HHH---HHHhcCCCeEEEEcChhHHHHHHHHhh
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQL-------NDF---CKDVVKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl-------~~~---~~~l~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
+.+|.|+++|+||||.|..+..... ....+....+++ ..+ ......+++.++|||+||.+++.+++.
T Consensus 49 ~~G~~V~~~D~~g~g~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~ 125 (238)
T d1ufoa_ 49 ERGFLLLAFDAPRHGEREGPPPSSK---SPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAE 125 (238)
T ss_dssp GGTEEEEECCCTTSTTSSCCCCCTT---STTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHT
T ss_pred HCCCEEEEecCCCCCCCcccccccc---cchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhc
Confidence 4689999999999999976542210 111122222222 111 122345789999999999999999999
Q ss_pred CcccccceEEee
Q 024900 74 EPEICRGMILLN 85 (261)
Q Consensus 74 ~p~~v~~lv~~~ 85 (261)
+|+....+.++.
T Consensus 126 ~p~~~~~~~~~~ 137 (238)
T d1ufoa_ 126 GFRPRGVLAFIG 137 (238)
T ss_dssp TCCCSCEEEESC
T ss_pred Ccchhheeeeee
Confidence 986544444433
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.47 E-value=4.4e-14 Score=117.16 Aligned_cols=75 Identities=20% Similarity=0.290 Sum_probs=67.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|+||||.|+.+. .+.++++++|.++++.++.+++++|||||||.++..++..+|++|+++|++
T Consensus 40 ~G~~V~~~~~~g~g~s~~~~---------~~~~~l~~~i~~~~~~~~~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i 110 (319)
T d1cvla_ 40 HGAKVYVANLSGFQSDDGPN---------GRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTI 110 (319)
T ss_dssp TTCCEEECCCBCSSCTTSTT---------SHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEecCCCCCCCCCCc---------ccHHHHHHHHHHHHHHhCCCCEEEEeccccHHHHHHHHHHCccccceEEEE
Confidence 46999999999999998642 357888999999999999999999999999999999999999999999999
Q ss_pred ecch
Q 024900 85 NISL 88 (261)
Q Consensus 85 ~~~~ 88 (261)
+++.
T Consensus 111 ~~p~ 114 (319)
T d1cvla_ 111 GTPH 114 (319)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 9764
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.47 E-value=2.2e-13 Score=109.35 Aligned_cols=183 Identities=14% Similarity=0.107 Sum_probs=108.6
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
+++|.|+++|.||+|.+........ ...+ .....+|+.+.++.+ ...++.++|+|+||.+++.++..+|+.++
T Consensus 66 ~~G~~v~~~d~r~~~~~g~~~~~~~--~~~~-~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~ 142 (260)
T d2hu7a2 66 AAGFHVVMPNYRGSTGYGEEWRLKI--IGDP-CGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFK 142 (260)
T ss_dssp HHTCEEEEECCTTCSSSCHHHHHTT--TTCT-TTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSS
T ss_pred hhccccccceeeecccccccccccc--cccc-chhhhhhhcccccccccccccceeeccccccccccccchhccCCcccc
Confidence 4689999999999987743210000 0011 112233444333322 23578999999999999999999999999
Q ss_pred ceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCC
Q 024900 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (261)
Q Consensus 80 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (261)
+++..++..... . +.. .... . ..........+ ..+.+.
T Consensus 143 a~i~~~~~~~~~-------------~-~~~--~~~~----~---------~~~~~~~~~~~----~~~~~~--------- 180 (260)
T d2hu7a2 143 AGVAGASVVDWE-------------E-MYE--LSDA----A---------FRNFIEQLTGG----SREIMR--------- 180 (260)
T ss_dssp EEEEESCCCCHH-------------H-HHH--TCCH----H---------HHHHHHHHHCS----CHHHHH---------
T ss_pred cccccccchhhh-------------h-hhc--cccc----c---------ccccccccccc----cccccc---------
Confidence 988777532110 0 000 0000 0 00000000000 011110
Q ss_pred chHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh----ccCCCCccEEEcCCCCCCCC-CCChhhH
Q 024900 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY----GNFDSVEDFIVLPNVGHCPQ-DEAPHLV 234 (261)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~----~~~~~~~~~~~i~~~gH~~~-~e~p~~~ 234 (261)
. . .....+.++++|+|+++|++|..+|.+.+..+ .+.....+++++|++||... .|+.+++
T Consensus 181 -------~---~----~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~ 246 (260)
T d2hu7a2 181 -------S---R----SPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKI 246 (260)
T ss_dssp -------H---T----CGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHH
T ss_pred -------c---c----chhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHH
Confidence 0 0 11233567889999999999999998876543 23344468999999999754 4666677
Q ss_pred HHHHHHHHHhc
Q 024900 235 NPLVESFVTRH 245 (261)
Q Consensus 235 ~~~l~~fl~~~ 245 (261)
...+.+||+++
T Consensus 247 ~~~~~~fl~~h 257 (260)
T d2hu7a2 247 LLPAVFFLATQ 257 (260)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77778899875
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.46 E-value=4.4e-13 Score=110.36 Aligned_cols=46 Identities=22% Similarity=0.260 Sum_probs=37.3
Q ss_pred CCCCCCCEEEEecCCCCCCCchhhhh-hccCCCCccEEEcCCCCCCC
Q 024900 181 LPQVKCPVLIAWGDKDPWEPIELGRA-YGNFDSVEDFIVLPNVGHCP 226 (261)
Q Consensus 181 l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~ 226 (261)
+.+|++|+|+++|++|.++|++.+.. +.++....+++++|++||..
T Consensus 258 a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~ 304 (322)
T d1vlqa_ 258 AARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEG 304 (322)
T ss_dssp HTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTT
T ss_pred HhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCC
Confidence 46789999999999999999987654 44454447899999999963
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.41 E-value=5.5e-12 Score=98.56 Aligned_cols=153 Identities=15% Similarity=0.143 Sum_probs=104.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHhc--CCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDF---CKDVV--KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~---~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
..+|.|+.+|+||.|.|.... .....+. +|..+. +.... ..++.++|+|+||.++..++...+. +
T Consensus 54 ~~G~~~lrfn~RG~g~S~G~~--------~~~~~e~-~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~-~ 123 (218)
T d2i3da1 54 KRGFTTLRFNFRSIGRSQGEF--------DHGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-I 123 (218)
T ss_dssp HTTCEEEEECCTTSTTCCSCC--------CSSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-E
T ss_pred hcCeeEEEEecCccCCCcccc--------ccchhHH-HHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhcc-c
Confidence 468999999999999997532 1222232 333333 33233 3579999999999999999987653 5
Q ss_pred cceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCC
Q 024900 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (261)
Q Consensus 79 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (261)
.+++++.+.... +
T Consensus 124 ~~~~~~~~~~~~-----------------------------------------------~-------------------- 136 (218)
T d2i3da1 124 EGFMSIAPQPNT-----------------------------------------------Y-------------------- 136 (218)
T ss_dssp EEEEEESCCTTT-----------------------------------------------S--------------------
T ss_pred cceeeccccccc-----------------------------------------------c--------------------
Confidence 555554432100 0
Q ss_pred CchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh----cc-CCCCccEEEcCCCCCCCCCCChhh
Q 024900 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY----GN-FDSVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~----~~-~~~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
....+..+.+|+++++|++|.+++......+ +. .....++++++|++|+.+ .+-++
T Consensus 137 ------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~ 197 (218)
T d2i3da1 137 ------------------DFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDE 197 (218)
T ss_dssp ------------------CCTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHH
T ss_pred ------------------chhhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCHHH
Confidence 0011344578999999999999988765432 21 233458899999999866 57789
Q ss_pred HHHHHHHHHHhcCCCCCcc
Q 024900 234 VNPLVESFVTRHATPPASV 252 (261)
Q Consensus 234 ~~~~l~~fl~~~~~~~~~~ 252 (261)
+.+.+.+||+++.+...+.
T Consensus 198 l~~~v~~~l~~~l~~~~~p 216 (218)
T d2i3da1 198 LMGECEDYLDRRLNGELVP 216 (218)
T ss_dssp HHHHHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHHHhcCCCCCC
Confidence 9999999999988876553
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.36 E-value=4.2e-13 Score=109.30 Aligned_cols=73 Identities=15% Similarity=0.159 Sum_probs=65.9
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccceEEe
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 84 (261)
.+|+|+++|++|+|.++ ++.++++++|.++++.++.++++||||||||.++..++..+|++|++||.+
T Consensus 38 ~G~~v~~~~~~~~~~~~------------~~a~~l~~~i~~~~~~~g~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i 105 (285)
T d1ex9a_ 38 DGAQVYVTEVSQLDTSE------------VRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSV 105 (285)
T ss_dssp TTCCEEEECCCSSSCHH------------HHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEeCCCCCCCcH------------HHHHHHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHHCCccceeEEEE
Confidence 46999999999999774 256788899999999999999999999999999999999999999999999
Q ss_pred ecchh
Q 024900 85 NISLR 89 (261)
Q Consensus 85 ~~~~~ 89 (261)
+++..
T Consensus 106 ~tPh~ 110 (285)
T d1ex9a_ 106 GAPHK 110 (285)
T ss_dssp SCCTT
T ss_pred CCCCC
Confidence 98754
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=1.6e-11 Score=96.57 Aligned_cols=127 Identities=16% Similarity=0.193 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHh---c--CCCeEEEEcChhHHHHHHHHhhCcccccceEEeecchhhhhhccCCCCCchhhHHHHHHh
Q 024900 37 ETWASQLNDFCKDV---V--KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLL 111 (261)
Q Consensus 37 ~~~a~dl~~~~~~l---~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (261)
...++.|..+++.. + .+++.++|+|+||.+++.+++.+|+++++++.+++....
T Consensus 90 ~~~~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~--------------------- 148 (229)
T d1fj2a_ 90 KQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPL--------------------- 148 (229)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTT---------------------
T ss_pred HHHHHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccc---------------------
Confidence 34444444444432 2 358999999999999999999999999999988763210
Q ss_pred hhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEE
Q 024900 112 RNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIA 191 (261)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 191 (261)
.. .+.+. .......++|++++
T Consensus 149 -----~~------------------~~~~~------------------------------------~~~~~~~~~Pvli~ 169 (229)
T d1fj2a_ 149 -----RA------------------SFPQG------------------------------------PIGGANRDISILQC 169 (229)
T ss_dssp -----GG------------------GSCSS------------------------------------CCCSTTTTCCEEEE
T ss_pred -----cc------------------ccccc------------------------------------ccccccccCceeEE
Confidence 00 00000 00011235799999
Q ss_pred ecCCCCCCCchhhhh----hccC--CCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcCC
Q 024900 192 WGDKDPWEPIELGRA----YGNF--DSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHAT 247 (261)
Q Consensus 192 ~G~~D~~~~~~~~~~----~~~~--~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~~ 247 (261)
||++|.++|.+.++. ++.. ..+.++++++++||.. .++++. .+.+||+++.+
T Consensus 170 hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i---~~~~~~-~~~~wL~~~Lp 227 (229)
T d1fj2a_ 170 HGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSS---CQQEMM-DVKQFIDKLLP 227 (229)
T ss_dssp EETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSC---CHHHHH-HHHHHHHHHSC
T ss_pred EcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCcc---CHHHHH-HHHHHHHhHCc
Confidence 999999999887643 3332 2245777889999974 455554 57779998874
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.28 E-value=1.6e-11 Score=98.52 Aligned_cols=68 Identities=15% Similarity=0.335 Sum_probs=49.1
Q ss_pred CCCCCCEEEEecCCCCCCCchh-hhhhcc-CC--CCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhcCCCC
Q 024900 182 PQVKCPVLIAWGDKDPWEPIEL-GRAYGN-FD--SVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHATPP 249 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~-~~~~~~-~~--~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~~~~ 249 (261)
.++++|+|+|+|++|.++|++. .+.+.+ .. ...++.+++|++|......-..+.+.+..||+.++..+
T Consensus 161 ~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L~~d 232 (260)
T d1jfra_ 161 PELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFIDSD 232 (260)
T ss_dssp TTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSCC
T ss_pred cccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHHhcCc
Confidence 4568999999999999999864 333322 21 12468899999999766555678888888988664443
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.28 E-value=3.8e-11 Score=98.45 Aligned_cols=75 Identities=12% Similarity=0.066 Sum_probs=61.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcc---cccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE---ICRG 80 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~ 80 (261)
+.+|+|+.+|+||+|.++.. .+.+++++.|..+.+..+.++++||||||||.++..++..+|+ +|++
T Consensus 58 ~~Gy~v~~~d~~g~g~~d~~----------~sae~la~~i~~v~~~~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~ 127 (317)
T d1tcaa_ 58 QLGYTPCWISPPPFMLNDTQ----------VNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDR 127 (317)
T ss_dssp TTTCEEEEECCTTTTCSCHH----------HHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEE
T ss_pred hCCCeEEEecCCCCCCCchH----------hHHHHHHHHHHHHHHhccCCceEEEEeCchHHHHHHHHHHCCCcchheeE
Confidence 46799999999999988632 2455666666677777788999999999999999999998884 6999
Q ss_pred eEEeecch
Q 024900 81 MILLNISL 88 (261)
Q Consensus 81 lv~~~~~~ 88 (261)
+|.++++.
T Consensus 128 ~v~i~~~~ 135 (317)
T d1tcaa_ 128 LMAFAPDY 135 (317)
T ss_dssp EEEESCCT
T ss_pred EEEeCCCC
Confidence 99999764
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.23 E-value=5.6e-11 Score=94.71 Aligned_cols=183 Identities=10% Similarity=0.015 Sum_probs=103.9
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC------CCeEEEEcChhHHHHHHHHhhCccc
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEPEI 77 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~ 77 (261)
.++|-|+.+|.||+|.+.....+. . ...+...+ .+++.+.++.+.. +++.++|+|+||.+++.++..+|+.
T Consensus 62 ~~g~~V~~~d~rg~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~ 138 (258)
T d2bgra2 62 TENIIVASFDGRGSGYQGDKIMHA-I-NRRLGTFE-VEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGV 138 (258)
T ss_dssp TTCCEEEEECCTTCSSSCHHHHGG-G-TTCTTSHH-HHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSC
T ss_pred cCCcEEEeecccccCCcchHHHHh-h-hhhhhhHH-HHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCc
Confidence 478999999999987653210000 0 01122222 2333344444421 3688999999999999999999998
Q ss_pred ccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhccCC
Q 024900 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (261)
Q Consensus 78 v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
+...+..+..... ......... . ...... .....+....
T Consensus 139 ~~~~~~~~~~~~~----------~~~~~~~~~------------~------------~~~~~~-~~~~~~~~~~------ 177 (258)
T d2bgra2 139 FKCGIAVAPVSRW----------EYYDSVYTE------------R------------YMGLPT-PEDNLDHYRN------ 177 (258)
T ss_dssp CSEEEEESCCCCG----------GGSBHHHHH------------H------------HHCCCS-TTTTHHHHHH------
T ss_pred ceEEEEeeccccc----------ccccccccc------------h------------hccccc-chhhHHHhhc------
Confidence 7776655432110 000000000 0 000000 0000111100
Q ss_pred CCchHHHHHHHHhhcCCCCccccCCCC-CCCEEEEecCCCCCCCchhhhhh----ccCCCCccEEEcCCCCCCCC-CCCh
Q 024900 158 ETGAADVFLEFICYSGGPLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAY----GNFDSVEDFIVLPNVGHCPQ-DEAP 231 (261)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~----~~~~~~~~~~~i~~~gH~~~-~e~p 231 (261)
. .....+.++ ++|+++++|++|..+|++.+..+ .+.....+++++|++||... .+..
T Consensus 178 -------------~----~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~ 240 (258)
T d2bgra2 178 -------------S----TVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAH 240 (258)
T ss_dssp -------------S----CSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHH
T ss_pred -------------c----cccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccH
Confidence 0 001112233 37999999999999998765543 23334578999999999743 3556
Q ss_pred hhHHHHHHHHHHhcCC
Q 024900 232 HLVNPLVESFVTRHAT 247 (261)
Q Consensus 232 ~~~~~~l~~fl~~~~~ 247 (261)
+++.+.+.+||+++..
T Consensus 241 ~~~~~~i~~fl~~~l~ 256 (258)
T d2bgra2 241 QHIYTHMSHFIKQCFS 256 (258)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 7888999999998754
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.21 E-value=1e-11 Score=99.05 Aligned_cols=69 Identities=14% Similarity=0.055 Sum_probs=52.9
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhCcccccce
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 81 (261)
.+.+|.|+++|+|+.+....+ ..+++..+.+..+.+....++++|+|||+||.+++.++...++....+
T Consensus 64 ~~~g~~v~~~dYrl~p~~~~~----------~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~ 132 (263)
T d1vkha_ 64 TESTVCQYSIEYRLSPEITNP----------RNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKM 132 (263)
T ss_dssp TTCCEEEEEECCCCTTTSCTT----------HHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTC
T ss_pred HhCCeEEEEeccccCcchhhh----------HHHHhhhhhhhcccccccccceeeeccCcHHHHHHHHHHhccCccccc
Confidence 357899999999976654322 246666666667777778889999999999999999999877654443
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.12 E-value=3.2e-09 Score=90.16 Aligned_cols=78 Identities=12% Similarity=-0.026 Sum_probs=61.3
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--------------------CCeEEEEcCh
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--------------------DQAFFICNSI 62 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--------------------~~~~lvGhS~ 62 (261)
+.++|-|+.+|.||+|.|+... ..++..+ ++|..++|+=+.. +++-++|+|+
T Consensus 133 ~~~GYavv~~D~RG~g~S~G~~-------~~~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY 204 (405)
T d1lnsa3 133 LTRGFASIYVAGVGTRSSDGFQ-------TSGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSY 204 (405)
T ss_dssp HTTTCEEEEECCTTSTTSCSCC-------CTTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETH
T ss_pred HhCCCEEEEECCCCCCCCCCcc-------ccCChhh-hhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCH
Confidence 4678999999999999998532 2234443 5677777766543 2699999999
Q ss_pred hHHHHHHHHhhCcccccceEEeecch
Q 024900 63 GGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 63 Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
||...+.+|+..|..++++|...+..
T Consensus 205 ~G~~q~~aA~~~pp~LkAivp~~~~~ 230 (405)
T d1lnsa3 205 LGTMAYGAATTGVEGLELILAEAGIS 230 (405)
T ss_dssp HHHHHHHHHTTTCTTEEEEEEESCCS
T ss_pred HHHHHHHHHhcCCccceEEEecCccc
Confidence 99999999999999999999887643
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.05 E-value=6.8e-10 Score=84.90 Aligned_cols=151 Identities=16% Similarity=0.098 Sum_probs=92.4
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHH---HHHHHH----HHHhcC--CCeEEEEcChhHHHHHHHHhh
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA---SQLNDF----CKDVVK--DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a---~dl~~~----~~~l~~--~~~~lvGhS~Gg~va~~~a~~ 73 (261)
|++++.|++++.+..+......... ......+..+.. +++..+ .++.++ .++.++|+|+||.+++.+++.
T Consensus 37 l~~~~~vv~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~ 115 (202)
T d2h1ia1 37 VDSEASVLSVRGNVLENGMPRFFRR-LAEGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFH 115 (202)
T ss_dssp HHTTSCEEEECCSEEETTEEESSCE-EETTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHH
T ss_pred hccCCceeeecccccCCCCcccccc-CCCCCCchHHHHHHHHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHh
Confidence 4578999999865554432110000 000112333332 233333 333343 589999999999999999999
Q ss_pred CcccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHh
Q 024900 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (261)
Q Consensus 74 ~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
+|+.+.+++.+++.... . .
T Consensus 116 ~~~~~~~~~~~~~~~~~-----------~-------------------------------------~------------- 134 (202)
T d2h1ia1 116 YENALKGAVLHHPMVPR-----------R-------------------------------------G------------- 134 (202)
T ss_dssp CTTSCSEEEEESCCCSC-----------S-------------------------------------S-------------
T ss_pred ccccccceeeecCCCCc-----------c-------------------------------------c-------------
Confidence 99999999877642100 0 0
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhh----ccCCCCccEEEcCCCCCCCCCC
Q 024900 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY----GNFDSVEDFIVLPNVGHCPQDE 229 (261)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~----~~~~~~~~~~~i~~~gH~~~~e 229 (261)
........+|+++++|++|.++|++.++.+ .+..-+.+++++|+ ||..
T Consensus 135 ------------------------~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~--- 186 (202)
T d2h1ia1 135 ------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENR-GHQL--- 186 (202)
T ss_dssp ------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESS-TTSC---
T ss_pred ------------------------ccccccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECC-CCcC---
Confidence 000122457899999999999998876543 33333467888886 8964
Q ss_pred ChhhHHHHHHHHHHh
Q 024900 230 APHLVNPLVESFVTR 244 (261)
Q Consensus 230 ~p~~~~~~l~~fl~~ 244 (261)
.++.+. .+.+||++
T Consensus 187 ~~~~~~-~~~~wl~k 200 (202)
T d2h1ia1 187 TMGEVE-KAKEWYDK 200 (202)
T ss_dssp CHHHHH-HHHHHHHH
T ss_pred CHHHHH-HHHHHHHH
Confidence 345444 56668875
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.03 E-value=2.3e-09 Score=82.60 Aligned_cols=34 Identities=29% Similarity=0.305 Sum_probs=32.0
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
+++.++|||+||.+++.+++.+|+++++++++++
T Consensus 104 ~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g 137 (209)
T d3b5ea1 104 DHATFLGYSNGANLVSSLMLLHPGIVRLAALLRP 137 (209)
T ss_dssp GGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESC
T ss_pred CCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCC
Confidence 5799999999999999999999999999998875
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=2.6e-10 Score=90.74 Aligned_cols=63 Identities=10% Similarity=-0.003 Sum_probs=47.0
Q ss_pred CCCCEEEEecCCCCCCCchhhhhh----ccCCCCccEEEcCCCCCCCC-CCChhhHHHHHHHHHHhcC
Q 024900 184 VKCPVLIAWGDKDPWEPIELGRAY----GNFDSVEDFIVLPNVGHCPQ-DEAPHLVNPLVESFVTRHA 246 (261)
Q Consensus 184 i~~Pvlii~G~~D~~~~~~~~~~~----~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~l~~fl~~~~ 246 (261)
.++|+|+++|+.|..+|++.+..+ .+.....+++++|++||... .+....+.+.+.+|+++..
T Consensus 189 ~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~~ 256 (258)
T d1xfda2 189 EEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 256 (258)
T ss_dssp CSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred hcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHhh
Confidence 368999999999999988765443 33344568999999999754 3445667788888998753
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.99 E-value=3.5e-09 Score=80.91 Aligned_cols=152 Identities=17% Similarity=0.157 Sum_probs=97.4
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHH---HHHHHHHHHHH----HhcCCCeEEEEcChhHHHHHHHHhhCc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFE---TWASQLNDFCK----DVVKDQAFFICNSIGGLVGLQAAVMEP 75 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~---~~a~dl~~~~~----~l~~~~~~lvGhS~Gg~va~~~a~~~p 75 (261)
|..++.|++++.+..+.+......... ....+.. ..++++..+++ ..+.+++.++|+|+||.+++.++..+|
T Consensus 40 l~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p 118 (203)
T d2r8ba1 40 LLPQATILSPVGDVSEHGAARFFRRTG-EGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQP 118 (203)
T ss_dssp HSTTSEEEEECCSEEETTEEESSCBCG-GGCBCHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHST
T ss_pred hccCCeEEEeccccccccccccccccC-ccccchhHHHHHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhh
Confidence 567899999988766655321110000 0122333 33444444433 345688999999999999999999999
Q ss_pred ccccceEEeecchhhhhhccCCCCCchhhHHHHHHhhhhhhhHHHHHhhcChHHHHHHHHhhcCCCCCCcHHHHHHHhcc
Q 024900 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (261)
Q Consensus 76 ~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (261)
+.+.+++.+++.... . .
T Consensus 119 ~~~~~~~~~~~~~~~-----------~-------------------------------------~--------------- 135 (203)
T d2r8ba1 119 ELFDAAVLMHPLIPF-----------E-------------------------------------P--------------- 135 (203)
T ss_dssp TTCSEEEEESCCCCS-----------C-------------------------------------C---------------
T ss_pred hcccceeeecccccc-----------c-------------------------------------c---------------
Confidence 999999988753100 0 0
Q ss_pred CCCCchHHHHHHHHhhcCCCCccccCCCCCCCEEEEecCCCCCCCchhhhhhc----cCCCCccEEEcCCCCCCCCCCCh
Q 024900 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG----NFDSVEDFIVLPNVGHCPQDEAP 231 (261)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~i~~~gH~~~~e~p 231 (261)
.........|+++++|++|+++|.+.++.+. +..-..+++++++ ||.. .+
T Consensus 136 ----------------------~~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~---~~ 189 (203)
T d2r8ba1 136 ----------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEI---RS 189 (203)
T ss_dssp ----------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSC---CH
T ss_pred ----------------------ccccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcC---CH
Confidence 0001123569999999999999988765543 2223357888876 8984 35
Q ss_pred hhHHHHHHHHHHhc
Q 024900 232 HLVNPLVESFVTRH 245 (261)
Q Consensus 232 ~~~~~~l~~fl~~~ 245 (261)
+++. .+.+||.++
T Consensus 190 ~~~~-~~~~wl~~~ 202 (203)
T d2r8ba1 190 GEID-AVRGFLAAY 202 (203)
T ss_dssp HHHH-HHHHHHGGG
T ss_pred HHHH-HHHHHHHhc
Confidence 5554 567899775
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=98.98 E-value=5.9e-09 Score=81.67 Aligned_cols=49 Identities=20% Similarity=0.318 Sum_probs=37.3
Q ss_pred CCCCCCEEEEecCCCCCCCchhhhhhc---cCCCCccEEEcCCCCCCCCCCC
Q 024900 182 PQVKCPVLIAWGDKDPWEPIELGRAYG---NFDSVEDFIVLPNVGHCPQDEA 230 (261)
Q Consensus 182 ~~i~~Pvlii~G~~D~~~~~~~~~~~~---~~~~~~~~~~i~~~gH~~~~e~ 230 (261)
.+|++|+|+++|++|+++|.+..+.+. +..++.+++++||++|..+.+.
T Consensus 157 ~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~ 208 (233)
T d1dina_ 157 PEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTS 208 (233)
T ss_dssp GGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTT
T ss_pred hccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCC
Confidence 457889999999999999988765432 2344568999999999755433
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=98.91 E-value=8.5e-09 Score=85.38 Aligned_cols=80 Identities=18% Similarity=-0.032 Sum_probs=60.6
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC--CCeEEEEcChhHHHHHHHHhhCcccccc
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 80 (261)
.+++|-|+++|.||+|.|+... + .......-+.|+.+++..... .++.++|+|+||.+++.+|+..|..+++
T Consensus 59 a~~GY~vv~~d~RG~g~S~G~~-~-----~~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~a 132 (347)
T d1ju3a2 59 VRDGYAVVIQDTRGLFASEGEF-V-----PHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKA 132 (347)
T ss_dssp HHTTCEEEEEECTTSTTCCSCC-C-----TTTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEE
T ss_pred HHCCCEEEEEeeCCccccCCcc-c-----cccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhccccccee
Confidence 3578999999999999998532 1 112333344566666665543 4899999999999999999999999999
Q ss_pred eEEeecch
Q 024900 81 MILLNISL 88 (261)
Q Consensus 81 lv~~~~~~ 88 (261)
+|...+..
T Consensus 133 iv~~~~~~ 140 (347)
T d1ju3a2 133 IAPSMASA 140 (347)
T ss_dssp BCEESCCS
T ss_pred eeeccccc
Confidence 98887643
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=98.67 E-value=1.2e-07 Score=75.45 Aligned_cols=69 Identities=12% Similarity=0.038 Sum_probs=47.4
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCc-----
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEP----- 75 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p----- 75 (261)
+.+|.|+.+|+|..+.. ++....+|+.+.+..+ ..+++.|+|||.||.++..++....
T Consensus 90 ~~G~~Vv~~~YRl~p~~--------------~~p~~~~d~~~a~~~~~~~~~~rI~l~G~SaGG~la~~~~~~~~~~~~~ 155 (261)
T d2pbla1 90 SKGWAVAMPSYELCPEV--------------RISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAV 155 (261)
T ss_dssp HTTEEEEEECCCCTTTS--------------CHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHH
T ss_pred cCCceeecccccccccc--------------cCchhHHHHHHHHHHHHhcccCceEEEEcchHHHHHHHHhcCcccccch
Confidence 46899999999965433 4455566665554444 2478999999999999977765432
Q ss_pred -ccccceEEeec
Q 024900 76 -EICRGMILLNI 86 (261)
Q Consensus 76 -~~v~~lv~~~~ 86 (261)
..+++++.+++
T Consensus 156 ~~~~~~~~~~~~ 167 (261)
T d2pbla1 156 GARIRNVVPISP 167 (261)
T ss_dssp HTTEEEEEEESC
T ss_pred hhchhhhhcccc
Confidence 24566666654
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.66 E-value=1.1e-07 Score=73.44 Aligned_cols=56 Identities=18% Similarity=0.300 Sum_probs=39.7
Q ss_pred CCCEEEEecCCCCCCCchhhhh----hccCCCCccEEEcCCCCCCCCCCChhhHHHHHHHHHHhc
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 245 (261)
+.|+++++|++|.++|.+.++. +.+...+.+++.++ +||.. .++++ +.+.+||.+.
T Consensus 157 ~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i---~~~~~-~~i~~wl~~~ 216 (218)
T d1auoa_ 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEV---LPQEI-HDIGAWLAAR 216 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSC---CHHHH-HHHHHHHHHH
T ss_pred CCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCcc---CHHHH-HHHHHHHHHh
Confidence 3699999999999999986544 33444456888886 68964 24444 4677788764
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=98.31 E-value=6.5e-07 Score=70.35 Aligned_cols=35 Identities=9% Similarity=0.057 Sum_probs=32.3
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+++.++|+|+||..++.+|+.+|+++++++.+++.
T Consensus 135 ~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~ 169 (255)
T d1jjfa_ 135 EHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAA 169 (255)
T ss_dssp GGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCC
T ss_pred ceeEeeeccchhHHHHHHHHhCCCcccEEEEEccC
Confidence 46999999999999999999999999999988864
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=98.22 E-value=8.5e-06 Score=65.91 Aligned_cols=63 Identities=10% Similarity=-0.011 Sum_probs=38.6
Q ss_pred CCCEEEEecCCCCCCCch--hhhhhccCCCCccEEEcCCCCCCCC-CCC-h--hhHHHHHHHHHHhcCC
Q 024900 185 KCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQ-DEA-P--HLVNPLVESFVTRHAT 247 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~-~e~-p--~~~~~~l~~fl~~~~~ 247 (261)
..|+++++|++|.+.+.. ..+.+++.....+++++++++|... +.. + ++-.+.+.+||.++.+
T Consensus 248 ~pp~li~~g~~D~l~~~~~~~~~~L~~~G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lr 316 (317)
T d1lzla_ 248 LPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 316 (317)
T ss_dssp CCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECcCccCCcccCCchHHHHHHHHHHHHHHHHhC
Confidence 479999999999654311 2233555544578999999999643 222 2 2233344567766543
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=98.20 E-value=1.3e-06 Score=72.48 Aligned_cols=60 Identities=17% Similarity=0.102 Sum_probs=40.6
Q ss_pred CCEEEEecCCCCCCCch--hhhhhccCCCCccEEEcCCCCCCCC----C---CChhhHHHHHHHHHHhc
Q 024900 186 CPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQ----D---EAPHLVNPLVESFVTRH 245 (261)
Q Consensus 186 ~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~----~---e~p~~~~~~l~~fl~~~ 245 (261)
.|++|++|+.|.+.+.. ..+.+++.....+++++++.+|... . +.-+++.+.|..|+..+
T Consensus 286 Pp~li~~g~~D~l~~e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~ 354 (358)
T d1jkma_ 286 PPFVVAVNELDPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 354 (358)
T ss_dssp CCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHH
Confidence 48999999999765321 2334555544579999999999531 1 22345677888898654
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=98.11 E-value=2.5e-06 Score=71.32 Aligned_cols=84 Identities=12% Similarity=-0.119 Sum_probs=55.5
Q ss_pred cCCCCeEEEecCCCCCCCCCCCCC-CC--CCCCCCCHHHHHHHHHHHH---HHhc-C--CCeEEEEcChhHHHHHHHHhh
Q 024900 3 LAKSHRVYSIDLIGYGYSDKPNPR-DF--FDKPFYTFETWASQLNDFC---KDVV-K--DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 3 L~~~~~V~~~Dl~G~G~S~~~~~~-~~--~~~~~~~~~~~a~dl~~~~---~~l~-~--~~~~lvGhS~Gg~va~~~a~~ 73 (261)
.+++|-|+++|.||+|.|+..... .. ......... .++|..+.+ .... + +++.++|+|+||+.++.+|+.
T Consensus 85 a~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~-~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~ 163 (381)
T d1mpxa2 85 VEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVD-HATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTN 163 (381)
T ss_dssp HHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCC-HHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTS
T ss_pred HhCCCEEEEEecCccCCCCCceeccchhhhhcccchhH-HHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhc
Confidence 357899999999999999743100 00 000011111 233444433 3332 3 489999999999999999999
Q ss_pred CcccccceEEeecc
Q 024900 74 EPEICRGMILLNIS 87 (261)
Q Consensus 74 ~p~~v~~lv~~~~~ 87 (261)
.|..++++|...+.
T Consensus 164 ~~~~l~a~v~~~~~ 177 (381)
T d1mpxa2 164 PHPALKVAVPESPM 177 (381)
T ss_dssp CCTTEEEEEEESCC
T ss_pred cccccceeeeeccc
Confidence 99999999887653
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.08 E-value=3.6e-06 Score=68.33 Aligned_cols=34 Identities=12% Similarity=0.070 Sum_probs=28.7
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccc-eEEeec
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRG-MILLNI 86 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~-lv~~~~ 86 (261)
+++.+.|+|+||++++.+++.||+.++. +.++.+
T Consensus 11 ~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg 45 (318)
T d2d81a1 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAG 45 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESC
T ss_pred cceEEEEECHHHHHHHHHHHhcccceeeeEEEecc
Confidence 5799999999999999999999999964 444444
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.07 E-value=6.2e-07 Score=71.40 Aligned_cols=79 Identities=14% Similarity=0.021 Sum_probs=57.2
Q ss_pred CCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--cCCCeEEEEcChhHHHHHHHHhhCcc-cccceE
Q 024900 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMI 82 (261)
Q Consensus 6 ~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lv 82 (261)
++.|+++|+.....++.... ..-.+.+.++.+.+.+++. +.+++++|||||||.++-.++.+++. .|+.+|
T Consensus 37 G~~V~~l~~g~~~~~~~~~~------~~~~~~~~~e~v~~~I~~~~~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lI 110 (279)
T d1ei9a_ 37 GIHVLSLEIGKTLREDVENS------FFLNVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLI 110 (279)
T ss_dssp TCCEEECCCSSSHHHHHHHH------HHSCHHHHHHHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEE
T ss_pred CeEEEEEEcCCCcccccccc------hhhhHHHHHHHHHHHHHhccccccceeEEEEccccHHHHHHHHHcCCCCcceEE
Confidence 67888888765544421100 1125677777777777643 34689999999999999999998875 599999
Q ss_pred Eeecchhh
Q 024900 83 LLNISLRM 90 (261)
Q Consensus 83 ~~~~~~~~ 90 (261)
.++++..+
T Consensus 111 TLgsPH~G 118 (279)
T d1ei9a_ 111 SVGGQHQG 118 (279)
T ss_dssp EESCCTTC
T ss_pred EECCCCCC
Confidence 99987654
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.02 E-value=3.7e-06 Score=70.29 Aligned_cols=82 Identities=10% Similarity=-0.159 Sum_probs=55.5
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHhc----C--CCeEEEEcChhHHHHHHHHhh
Q 024900 4 AKSHRVYSIDLIGYGYSDKPNPRDFF----DKPFYTFETWASQLNDFCKDVV----K--DQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 4 ~~~~~V~~~Dl~G~G~S~~~~~~~~~----~~~~~~~~~~a~dl~~~~~~l~----~--~~~~lvGhS~Gg~va~~~a~~ 73 (261)
+++|-|+++|.||+|.|+... +... ....+...+ ++|..+.++-+. . .++-++|+|+||..++.+|..
T Consensus 91 ~~Gy~vv~~d~RG~g~S~G~~-~~~~~~~~~~~~~~~~e-~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~ 168 (385)
T d2b9va2 91 EGGYIRVFQDIRGKYGSQGDY-VMTRPPHGPLNPTKTDE-TTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLD 168 (385)
T ss_dssp HTTCEEEEEECTTSTTCCSCC-CTTCCCSBTTBCSSCCH-HHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTS
T ss_pred hCCcEEEEEcCCcccCCCCce-eeccccccccccchhhH-HHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhc
Confidence 578999999999999997431 0000 000111112 344444443331 2 479999999999999999999
Q ss_pred CcccccceEEeecc
Q 024900 74 EPEICRGMILLNIS 87 (261)
Q Consensus 74 ~p~~v~~lv~~~~~ 87 (261)
.|..++.+|...+.
T Consensus 169 ~~~~l~a~~~~~~~ 182 (385)
T d2b9va2 169 PHPALKVAAPESPM 182 (385)
T ss_dssp CCTTEEEEEEEEEC
T ss_pred cCCcceEEEEeccc
Confidence 99999999887654
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.00 E-value=1.8e-05 Score=62.86 Aligned_cols=84 Identities=17% Similarity=0.046 Sum_probs=56.2
Q ss_pred CCCeEEEecCCCCC-CCCCCCCCC-CCCCCCCCHHHH-HHHHHHHHHHh---cCCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYG-YSDKPNPRD-FFDKPFYTFETW-ASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G-~S~~~~~~~-~~~~~~~~~~~~-a~dl~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.++-||.+|--..+ .+....+.. ......+.++++ +++|...+++. ..++..+.|+||||+.|+.+|+.+|+++
T Consensus 60 ~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F 139 (280)
T d1dqza_ 60 SGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQF 139 (280)
T ss_dssp SSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTC
T ss_pred CCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCce
Confidence 56889999953222 121111100 001123455554 67777777654 3457899999999999999999999999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
++++.+++..
T Consensus 140 ~av~s~SG~~ 149 (280)
T d1dqza_ 140 PYAASLSGFL 149 (280)
T ss_dssp SEEEEESCCC
T ss_pred eEEEEecCcc
Confidence 9999998754
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.98 E-value=1.7e-05 Score=62.62 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=54.4
Q ss_pred CCCeEEEecCCCCC-CCCCCCCCCCCCCCCCCHHHH-HHHHHHHHHHh-c--CCCeEEEEcChhHHHHHHHHhhCccccc
Q 024900 5 KSHRVYSIDLIGYG-YSDKPNPRDFFDKPFYTFETW-ASQLNDFCKDV-V--KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G-~S~~~~~~~~~~~~~~~~~~~-a~dl~~~~~~l-~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 79 (261)
.++-||.+|--+.+ .++.+. ...+.++++ +++|...+++. . .++..+.|+||||+.|+.+|+++|++++
T Consensus 58 ~~~iVV~p~g~~~~~y~~~~~------~~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~ 131 (267)
T d1r88a_ 58 KGISVVAPAGGAYSMYTNWEQ------DGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFG 131 (267)
T ss_dssp SSSEEEEECCCTTSTTSBCSS------CTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEE
T ss_pred CCeEEEEECCCCCcCCccccc------cccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCccccc
Confidence 46788998842211 222221 122456544 55677777553 3 3578999999999999999999999999
Q ss_pred ceEEeecch
Q 024900 80 GMILLNISL 88 (261)
Q Consensus 80 ~lv~~~~~~ 88 (261)
+++.+++.+
T Consensus 132 av~~~SG~~ 140 (267)
T d1r88a_ 132 FAGSMSGFL 140 (267)
T ss_dssp EEEEESCCC
T ss_pred EEEEeCCcc
Confidence 999999753
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.96 E-value=1.5e-05 Score=64.45 Aligned_cols=58 Identities=16% Similarity=0.102 Sum_probs=38.4
Q ss_pred CCCEEEEecCCCCCCCch--hhhhhccCCCCccEEEcCCCCCCCC-----CCChhhHHHHHHHHH
Q 024900 185 KCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQ-----DEAPHLVNPLVESFV 242 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~-----~e~p~~~~~~l~~fl 242 (261)
-.||+|++|+.|.+++.. ..+.+++.....++++++|++|... .++..+..+.+.+||
T Consensus 244 ~pP~li~~g~~D~l~d~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 244 LPPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp CCCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCChHHHHHHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 478999999999765422 1334555544578999999999532 222345566666776
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.80 E-value=0.00039 Score=54.01 Aligned_cols=66 Identities=12% Similarity=-0.030 Sum_probs=42.7
Q ss_pred CCCCEEEEecCCCCCCCchhhhhhcc-----------CCCCccEEEcCCCCCCCCCCChh--hHHHHHHHHHHhcCCCC
Q 024900 184 VKCPVLIAWGDKDPWEPIELGRAYGN-----------FDSVEDFIVLPNVGHCPQDEAPH--LVNPLVESFVTRHATPP 249 (261)
Q Consensus 184 i~~Pvlii~G~~D~~~~~~~~~~~~~-----------~~~~~~~~~i~~~gH~~~~e~p~--~~~~~l~~fl~~~~~~~ 249 (261)
...|+|+++|++|..+|...+..+.+ .....++++++++||...-...+ +....+.+||++++-.+
T Consensus 199 ~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~~ 277 (280)
T d1qfma2 199 QYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNID 277 (280)
T ss_dssp CCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 34589999999999999876543221 12335799999999974322222 22224557998876543
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.76 E-value=0.00014 Score=61.55 Aligned_cols=78 Identities=17% Similarity=0.080 Sum_probs=52.7
Q ss_pred CCCeEEEecCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh---
Q 024900 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (261)
Q Consensus 5 ~~~~V~~~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~--- 73 (261)
+...|+.+|+| |.|-|..... ....+....+.|+.+++..+ ...+++|.|-|+||.-+-.+|..
T Consensus 91 ~~anllfIDqPvGtGfS~~~~~-----~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~ 165 (452)
T d1ivya_ 91 LIANVLYLESPAGVGFSYSDDK-----FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQ 165 (452)
T ss_dssp GSSEEEEECCSTTSTTCEESSC-----CCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTT
T ss_pred cccCEEEEecCCCcccccCCCC-----CCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHh
Confidence 56789999986 9999953211 01234556666665555332 23489999999999977777753
Q ss_pred -CcccccceEEeecc
Q 024900 74 -EPEICRGMILLNIS 87 (261)
Q Consensus 74 -~p~~v~~lv~~~~~ 87 (261)
.+-.++++++.++.
T Consensus 166 ~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 166 DPSMNLQGLAVGNGL 180 (452)
T ss_dssp CTTSCEEEEEEESCC
T ss_pred cCcccccceEcCCCc
Confidence 23358999988874
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=97.75 E-value=3.3e-06 Score=68.76 Aligned_cols=78 Identities=12% Similarity=0.006 Sum_probs=50.2
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hc--CCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VV--KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~----l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
+++.|+++|........... ...+.....+.|.+++.. .+ .++++|||||+||.||-.++ ++..+|
T Consensus 99 ~d~NVI~VDW~~~a~~~Y~~-------a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG-~~~~~l 170 (337)
T d1rp1a2 99 EEVNCICVDWKKGSQTSYTQ-------AANNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAG-SRTPGL 170 (337)
T ss_dssp CCEEEEEEECHHHHSSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHH-HTSTTC
T ss_pred CCceEEEEeeccccCcchHH-------HHHHHHHHHHHHHHHHHHHHHhcCCChhheEEEeecHHHhhhHHHH-Hhhccc
Confidence 56999999996532111000 001233344555555543 33 36899999999999997555 555689
Q ss_pred cceEEeecchhh
Q 024900 79 RGMILLNISLRM 90 (261)
Q Consensus 79 ~~lv~~~~~~~~ 90 (261)
.+++.+|++...
T Consensus 171 ~rItgLDPA~P~ 182 (337)
T d1rp1a2 171 GRITGLDPVEAS 182 (337)
T ss_dssp CEEEEESCCCTT
T ss_pred cceeccCCCccc
Confidence 999999986443
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.70 E-value=4.8e-06 Score=67.72 Aligned_cols=78 Identities=10% Similarity=0.032 Sum_probs=54.8
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----c--CCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----V--KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l----~--~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.++.|+++|....-....+. ...+.....+.|..++..| + .++++|||||+||.||-.++...+.+|
T Consensus 99 ~d~NVi~VDW~~~a~~~Y~~-------a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~ki 171 (338)
T d1bu8a2 99 EKVNCICVDWRRGSRTEYTQ-------ASYNTRVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHV 171 (338)
T ss_dssp CCEEEEEEECHHHHSSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCS
T ss_pred CCceEEEEechhhcccchHH-------HHHhHHHHHHHHHHHHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhcccc
Confidence 56999999997643221100 1123444555555555443 3 378999999999999999999888899
Q ss_pred cceEEeecchh
Q 024900 79 RGMILLNISLR 89 (261)
Q Consensus 79 ~~lv~~~~~~~ 89 (261)
.+++-+|++..
T Consensus 172 grItgLDPA~P 182 (338)
T d1bu8a2 172 GRITGLDPAEP 182 (338)
T ss_dssp SEEEEESCBCT
T ss_pred ccccccccCcC
Confidence 99999998643
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=97.67 E-value=6.4e-05 Score=60.17 Aligned_cols=60 Identities=13% Similarity=0.050 Sum_probs=40.3
Q ss_pred CCEEEEecCCCCCCCchh--hhhhccCCCCccEEEcCCCCCCCC-CC--Ch--hhHHHHHHHHHHhc
Q 024900 186 CPVLIAWGDKDPWEPIEL--GRAYGNFDSVEDFIVLPNVGHCPQ-DE--AP--HLVNPLVESFVTRH 245 (261)
Q Consensus 186 ~Pvlii~G~~D~~~~~~~--~~~~~~~~~~~~~~~i~~~gH~~~-~e--~p--~~~~~~l~~fl~~~ 245 (261)
.|+++++|+.|.+++... .+.+++.....+++++++++|... +. -| ++..+.+.+||++.
T Consensus 240 Pp~li~~g~~D~l~~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~ 306 (308)
T d1u4na_ 240 PPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 306 (308)
T ss_dssp CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEecCcCCchHHHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 489999999997754211 233544544579999999999633 21 23 36667777888764
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.62 E-value=3.6e-05 Score=63.88 Aligned_cols=39 Identities=10% Similarity=0.088 Sum_probs=32.5
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcc-------------------------cccceEEeecchhhh
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPE-------------------------ICRGMILLNISLRML 91 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~-------------------------~v~~lv~~~~~~~~~ 91 (261)
.+++||||||||.-+-.++...|+ .|++|+.++++....
T Consensus 105 ~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTTIsTPH~GS 168 (388)
T d1ku0a_ 105 GRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTTIATPHDGT 168 (388)
T ss_dssp CCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCTTCC
T ss_pred CceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceEEEEeccCCCCCc
Confidence 489999999999999888876544 699999999876543
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.61 E-value=5.5e-05 Score=60.04 Aligned_cols=84 Identities=14% Similarity=0.009 Sum_probs=55.6
Q ss_pred CCCeEEEecCCCCCCCCCC-CCCC-CCCCCCCCHHH-HHHHHHHHHHH-hc--CCCeEEEEcChhHHHHHHHHhhCcccc
Q 024900 5 KSHRVYSIDLIGYGYSDKP-NPRD-FFDKPFYTFET-WASQLNDFCKD-VV--KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (261)
Q Consensus 5 ~~~~V~~~Dl~G~G~S~~~-~~~~-~~~~~~~~~~~-~a~dl~~~~~~-l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v 78 (261)
.++-|+++|..+.+..... .+.. ......+.++. .++++...+++ +. .++..+.|+||||..|+.+|+++|+++
T Consensus 65 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f 144 (288)
T d1sfra_ 65 SGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQF 144 (288)
T ss_dssp SSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred CCCEEEEeccCCCCCCccccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccc
Confidence 4577889988776654321 1100 00001123343 35666655544 33 357999999999999999999999999
Q ss_pred cceEEeecch
Q 024900 79 RGMILLNISL 88 (261)
Q Consensus 79 ~~lv~~~~~~ 88 (261)
++++.+++..
T Consensus 145 ~av~~~Sg~~ 154 (288)
T d1sfra_ 145 VYAGAMSGLL 154 (288)
T ss_dssp EEEEEESCCS
T ss_pred cEEEEecCcc
Confidence 9999998753
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=97.33 E-value=0.00021 Score=55.70 Aligned_cols=35 Identities=17% Similarity=0.026 Sum_probs=32.6
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeecc
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 87 (261)
+++.+.|+||||..++.+|+++|+++++++.+++.
T Consensus 144 ~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~ 178 (273)
T d1wb4a1 144 MHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 178 (273)
T ss_dssp GGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred cceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcc
Confidence 56999999999999999999999999999998875
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=97.28 E-value=0.00018 Score=55.61 Aligned_cols=49 Identities=24% Similarity=0.257 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhc-----CCCeEEEEcChhHHHHHHHHhhCcccccceEEeecch
Q 024900 40 ASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (261)
Q Consensus 40 a~dl~~~~~~l~-----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 88 (261)
.+++..+++... .++..++|+||||..++.++.+||+++++++.+++..
T Consensus 105 ~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~ 158 (246)
T d3c8da2 105 QQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 158 (246)
T ss_dssp HHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred HHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCccc
Confidence 455555555532 2468999999999999999999999999999999753
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=96.22 E-value=0.0053 Score=47.25 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=25.5
Q ss_pred CCeEEEEcChhHHHHHHHHhhCcccccceEEeec
Q 024900 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (261)
Q Consensus 53 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 86 (261)
.+..+.|||+||..++.++. +++...+++.+++
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~-~~~~f~~~~a~s~ 173 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWL-SSSYFRSYYSASP 173 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHH-HCSSCSEEEEESG
T ss_pred CceEEEeccHHHHHHHHHHH-cCcccCEEEEECC
Confidence 45889999999999998665 4566777776654
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.18 E-value=0.0028 Score=49.51 Aligned_cols=23 Identities=22% Similarity=0.166 Sum_probs=19.9
Q ss_pred cCCCeEEEEcChhHHHHHHHHhh
Q 024900 51 VKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 51 ~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
...++++.|||+||.+|..+|+.
T Consensus 130 ~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 130 PSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHH
T ss_pred CCceEEEecccchHHHHHHHHHH
Confidence 34579999999999999998874
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.15 E-value=0.003 Score=49.27 Aligned_cols=22 Identities=23% Similarity=0.282 Sum_probs=19.4
Q ss_pred CCCeEEEEcChhHHHHHHHHhh
Q 024900 52 KDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
..++++.|||+||.+|..+|+.
T Consensus 132 ~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 132 TYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp TCEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEEecccchHHHHHHHHH
Confidence 4589999999999999988874
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.13 E-value=0.0026 Score=49.80 Aligned_cols=37 Identities=19% Similarity=0.141 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHh----cCCCeEEEEcChhHHHHHHHHhh
Q 024900 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 37 ~~~a~dl~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
....+++.+.++.+ ...++++.|||+||.+|..+|+.
T Consensus 117 ~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 117 KLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 33444444444433 23479999999999999998875
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.11 E-value=0.0032 Score=49.00 Aligned_cols=22 Identities=14% Similarity=0.066 Sum_probs=19.2
Q ss_pred CCCeEEEEcChhHHHHHHHHhh
Q 024900 52 KDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
..++++.|||+||.+|..+|..
T Consensus 124 ~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 124 DYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp TSEEEEEEETHHHHHHHHHHHH
T ss_pred CcceEEeccchhHHHHHHHHHH
Confidence 3479999999999999988875
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.09 E-value=0.0032 Score=49.20 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=19.7
Q ss_pred CCCeEEEEcChhHHHHHHHHhh
Q 024900 52 KDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 52 ~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
..++++.|||+||.+|..+|..
T Consensus 137 ~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 137 DYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp TSEEEEEEETHHHHHHHHHHHH
T ss_pred CcceeeeccchHHHHHHHHHHH
Confidence 4589999999999999999985
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.63 E-value=0.0086 Score=47.45 Aligned_cols=53 Identities=11% Similarity=0.109 Sum_probs=39.1
Q ss_pred CHHHH-HHHHHHHHHHhc-C---------CCeEEEEcChhHHHHHHHHhh--CcccccceEEeecc
Q 024900 35 TFETW-ASQLNDFCKDVV-K---------DQAFFICNSIGGLVGLQAAVM--EPEICRGMILLNIS 87 (261)
Q Consensus 35 ~~~~~-a~dl~~~~~~l~-~---------~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lv~~~~~ 87 (261)
.+.++ +++|..+|++.- . ++-.|.||||||.-|+.+|++ +|++..++..+++.
T Consensus 124 ~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~ 189 (299)
T d1pv1a_ 124 QMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPI 189 (299)
T ss_dssp BHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCC
T ss_pred chHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCc
Confidence 34444 566766665542 1 458899999999999999986 48888888877754
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.54 E-value=0.005 Score=51.27 Aligned_cols=77 Identities=12% Similarity=-0.011 Sum_probs=53.5
Q ss_pred CCCeEEEec-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---------cCCCeEEEEcChhHHHHHHHHhh-
Q 024900 5 KSHRVYSID-LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---------VKDQAFFICNSIGGLVGLQAAVM- 73 (261)
Q Consensus 5 ~~~~V~~~D-l~G~G~S~~~~~~~~~~~~~~~~~~~a~dl~~~~~~l---------~~~~~~lvGhS~Gg~va~~~a~~- 73 (261)
+...++.+| .-|.|-|..... ..++-...++|+.++++.. ...++.|.|-|+||.-+-.+|..
T Consensus 86 ~~anllfiD~PvGtGfSy~~~~------~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i 159 (421)
T d1wpxa1 86 SNATVIFLDQPVNVGFSYSGSS------GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEI 159 (421)
T ss_dssp GSSEEEEECCSTTSTTCBCSSC------CCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHH
T ss_pred cccCEEEEecCCCCCceecCCc------cccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHH
Confidence 557899999 559999964321 2356667777777776443 23479999999999977777652
Q ss_pred --C---cccccceEEeecc
Q 024900 74 --E---PEICRGMILLNIS 87 (261)
Q Consensus 74 --~---p~~v~~lv~~~~~ 87 (261)
. +-.++++++.++.
T Consensus 160 ~~~~~~~inlkGi~iGng~ 178 (421)
T d1wpxa1 160 LSHKDRNFNLTSVLIGNGL 178 (421)
T ss_dssp HHCSSCSSCCCEEEEESCC
T ss_pred HHccCCCcceeeeEecCCc
Confidence 2 2247799888764
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=95.31 E-value=0.0033 Score=53.47 Aligned_cols=83 Identities=17% Similarity=0.067 Sum_probs=53.6
Q ss_pred CCCeEEEecCC-CCCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHh-------cCCCeEEEEcChhHHHHHHHHhh
Q 024900 5 KSHRVYSIDLI-GYGYSDKPNPRDF---FDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM 73 (261)
Q Consensus 5 ~~~~V~~~Dl~-G~G~S~~~~~~~~---~~~~~~~~~~~a~dl~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~ 73 (261)
+..+|+.+|+| |-|-|-....... ......+..+.++++.++++.. ...+++|.|-|+||.-+-.+|..
T Consensus 109 ~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~ 188 (483)
T d1ac5a_ 109 SKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANA 188 (483)
T ss_dssp GTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHH
T ss_pred ccCCEEEEeCCCCcCeeecCCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHH
Confidence 55789999975 9999953221100 0001235667777777776543 34579999999999977766653
Q ss_pred C------------cccccceEEeecc
Q 024900 74 E------------PEICRGMILLNIS 87 (261)
Q Consensus 74 ~------------p~~v~~lv~~~~~ 87 (261)
- +=.++++.+.++.
T Consensus 189 i~~~n~~~~~~~~~inLkGi~IGNg~ 214 (483)
T d1ac5a_ 189 ILNHNKFSKIDGDTYDLKALLIGNGW 214 (483)
T ss_dssp HHHHHHHCCSTTSCCEEEEEEEEEEC
T ss_pred HHHhccccccCCCcccceeeeecCCc
Confidence 1 1248888877754
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.79 E-value=0.57 Score=38.17 Aligned_cols=60 Identities=20% Similarity=0.203 Sum_probs=46.2
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccCC------------------------------CCccEEEcCCCCCCCCCCChhh
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNFD------------------------------SVEDFIVLPNVGHCPQDEAPHL 233 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~~------------------------------~~~~~~~i~~~gH~~~~e~p~~ 233 (261)
.++|||..|+.|..+|....+. +.++. .+-++..+.+|||+.+.++|++
T Consensus 327 ~irVLIysGd~D~~~p~~Gte~~i~~L~w~~~~~f~~~~~~~w~~~~~~~~aG~~~~~~nltf~~V~~AGHmvP~d~P~~ 406 (421)
T d1wpxa1 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPEN 406 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEEEEETTEEEEEETTCCSSHHHHCHHH
T ss_pred CCeEEEEeCCcCccCCchhHHHHHHhCCCCcccchhcCcccceeecCCCeEEEEEEEECCeEEEEECCccccCcccCHHH
Confidence 5799999999999998864332 22110 1124678899999999999999
Q ss_pred HHHHHHHHHHh
Q 024900 234 VNPLVESFVTR 244 (261)
Q Consensus 234 ~~~~l~~fl~~ 244 (261)
...+++.|+.-
T Consensus 407 a~~m~~~fi~G 417 (421)
T d1wpxa1 407 ALSMVNEWIHG 417 (421)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999953
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=89.08 E-value=0.62 Score=38.79 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=47.2
Q ss_pred CCCEEEEecCCCCCCCchhhhh-hccC------------------------------------CCCccEEEcCCCCCCCC
Q 024900 185 KCPVLIAWGDKDPWEPIELGRA-YGNF------------------------------------DSVEDFIVLPNVGHCPQ 227 (261)
Q Consensus 185 ~~Pvlii~G~~D~~~~~~~~~~-~~~~------------------------------------~~~~~~~~i~~~gH~~~ 227 (261)
.++|||..|+.|..+|....+. +.++ ..+-++..+.+|||+.+
T Consensus 372 girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmvP 451 (483)
T d1ac5a_ 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccCc
Confidence 5799999999999988754332 1111 01235788999999999
Q ss_pred CCChhhHHHHHHHHHHhc
Q 024900 228 DEAPHLVNPLVESFVTRH 245 (261)
Q Consensus 228 ~e~p~~~~~~l~~fl~~~ 245 (261)
.++|+.-.++++.||.+.
T Consensus 452 ~dqP~~a~~mi~~fl~~~ 469 (483)
T d1ac5a_ 452 FDKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp HHCHHHHHHHHHHHTTCC
T ss_pred ccCHHHHHHHHHHHhCCc
Confidence 999999999999999864
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=86.41 E-value=0.75 Score=33.36 Aligned_cols=50 Identities=8% Similarity=-0.007 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcChhHHHHHHHHhhC----cccccceEEeecc
Q 024900 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME----PEICRGMILLNIS 87 (261)
Q Consensus 38 ~~a~dl~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lv~~~~~ 87 (261)
...+.|.+...+=-..+++|+|.|-|+.|+-.++..- .++|.++|+++-+
T Consensus 81 ~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 81 EMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 3344444433333356999999999999999888754 4578999988754
|