Citrus Sinensis ID: 024905

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
MAIAFLLLLLPITYLTTTTAVDEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLRGNCI
cHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccEEEccccccEEEEEccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccHHHHHHccccccccEEEEEccccccccEEEEEccccccccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccccccEEcc
ccEEEEEEEccccEEcccccccHHcHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccEEEccccccEEEEEEccccccEEEEEEcccccccHHcccccccccccccEEccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHccccccccEEEEEEcccccccEEEEEcccccEccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEc
MAIAFLLLLLPITYLTTTTAVDEILTNQVMISAQQDKDWLVSVRRQIhenpellfeeHNTSALIRRELDklgipyaypvaktgivaqigsgsrpvVVLRadmdalplqELVEWEHKskidgkmhacghdvhTTMLLGAAKLIHQRKDKLKGTVRIlfqpaeeggagafhmikegalgdseAIFGMHidvgiptgsiasisgphlaaTSVFNvkvegrgghaamphstidpiLTASSVILALQQLISReadplqslrgnci
MAIAFLLLLLPITYLTTTTAVDEILTNQVMISAQQDKDWLVSVRRQIHEnpellfeehntSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLIsreadplqslrgnci
MAIAFlllllpitylttttAVDEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLRGNCI
**IAFLLLLLPITYLTTTTAVDEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLI***************
MAIAFLLLLLPITYLTTTTAV*EILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLRGNCI
MAIAFLLLLLPITYLTTTTAVDEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLRGNCI
MAIAFLLLLLPITYLTTTTAVDEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLRGNCI
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oooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAIAFLLLLLPITYLTTTTAVDEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLRGNCI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query260 2.2.26 [Sep-21-2011]
O81641 428 IAA-amino acid hydrolase yes no 0.965 0.586 0.703 1e-100
Q7XUA8 426 IAA-amino acid hydrolase yes no 0.85 0.518 0.653 5e-81
Q8S9S4 442 IAA-amino acid hydrolase no no 0.830 0.488 0.615 9e-78
Q84XG9 442 IAA-amino acid hydrolase N/A no 0.830 0.488 0.611 3e-77
O04373 440 IAA-amino acid hydrolase no no 0.969 0.572 0.531 3e-77
Q8H3C7 440 IAA-amino acid hydrolase no no 0.830 0.490 0.593 5e-76
Q851L5 417 IAA-amino acid hydrolase no no 0.826 0.515 0.580 1e-75
P54970 439 IAA-amino acid hydrolase no no 0.834 0.494 0.617 1e-75
Q9SWX9 435 IAA-amino acid hydrolase no no 0.969 0.579 0.527 1e-73
Q8H3C9 455 IAA-amino acid hydrolase no no 0.830 0.474 0.6 2e-73
>sp|O81641|ILL3_ARATH IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1 Back     alignment and function desciption
 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/253 (70%), Positives = 207/253 (81%), Gaps = 2/253 (0%)

Query: 2   AIAFLLLLLPITYLTTTTAVDEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTS 61
           +I  LLLL  I   ++    D+   NQ +  A  DK+WLVSVRRQIHENPELLFE H TS
Sbjct: 5   SIVALLLLFVIA--SSVNGGDQEYPNQYLTEALGDKEWLVSVRRQIHENPELLFELHKTS 62

Query: 62  ALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDG 121
           ALIRRELD+LG+ Y+YPVAKTGIVAQIGSG  PVV LRADMDALPLQELVEW+HKSKIDG
Sbjct: 63  ALIRRELDELGVSYSYPVAKTGIVAQIGSGYPPVVALRADMDALPLQELVEWDHKSKIDG 122

Query: 122 KMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEA 181
           KMHACGHD HTTMLLGAAKL+ +RK  L GTVR+LFQPAEEGGAGAFHMIKEGALGDSEA
Sbjct: 123 KMHACGHDSHTTMLLGAAKLLSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEGALGDSEA 182

Query: 182 IFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILAL 241
           IFGMH+  G+PTG +A+ISGP LA+TS+F+V++ G+   ++  +S +DP+L ASS ILAL
Sbjct: 183 IFGMHVHTGLPTGELATISGPALASTSIFSVRMSGKSPASSETYSCVDPVLAASSTILAL 242

Query: 242 QQLISREADPLQS 254
           Q +ISRE DPL S
Sbjct: 243 QLIISREVDPLLS 255
Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA).
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q7XUA8|ILL5_ORYSJ IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1 Back     alignment and function description
>sp|Q8S9S4|ILL1_ORYSJ IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|Q84XG9|ILL1_ORYSI IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2 Back     alignment and function description
>sp|Q8H3C7|ILL9_ORYSJ IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2 Back     alignment and function description
>sp|Q851L5|ILL3_ORYSJ IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1 Back     alignment and function description
>sp|P54970|ILL2_ARATH IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2 Back     alignment and function description
>sp|Q9SWX9|ILL5_ARATH IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1 Back     alignment and function description
>sp|Q8H3C9|ILL7_ORYSJ IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query260
224118492 432 iaa-amino acid hydrolase 6 [Populus tric 0.957 0.576 0.72 1e-103
49524064 431 putative auxin-amidohydrolase precursor 0.969 0.584 0.707 1e-102
255560590 431 IAA-amino acid hydrolase ILR1 precursor, 0.957 0.577 0.733 1e-101
224134985 404 iaa-amino acid hydrolase 5 [Populus tric 0.876 0.564 0.780 1e-101
269980523 432 IAA-amino acid hydrolase [Populus toment 0.957 0.576 0.708 1e-100
49524066 432 putative auxin-amidohydrolase precursor 0.957 0.576 0.704 1e-100
15239551 428 IAA-amino acid hydrolase ILR1-like 3 [Ar 0.965 0.586 0.703 5e-98
388511211 426 unknown [Lotus japonicus] 0.973 0.593 0.673 6e-96
357464257 420 IAA-amino acid hydrolase ILR1-like prote 0.969 0.6 0.675 6e-96
225455181 424 PREDICTED: IAA-amino acid hydrolase ILR1 0.896 0.549 0.746 2e-95
>gi|224118492|ref|XP_002317832.1| iaa-amino acid hydrolase 6 [Populus trichocarpa] gi|118487016|gb|ABK95339.1| unknown [Populus trichocarpa] gi|222858505|gb|EEE96052.1| iaa-amino acid hydrolase 6 [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/250 (72%), Positives = 212/250 (84%), Gaps = 1/250 (0%)

Query: 6   LLLLLPITYLTTTTAVD-EILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALI 64
           +LL + + + ++ +  D +     ++ S+Q+DKDWL+++RRQIHENPEL FEEHNTSALI
Sbjct: 12  VLLSVLVCFDSSQSTFDRQTYREHLLSSSQRDKDWLITIRRQIHENPELRFEEHNTSALI 71

Query: 65  RRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMH 124
           R ELDKL I Y YP+AKTGIVAQIGSGS PVV LRADMDALPLQELVEWEHKSK+DGKMH
Sbjct: 72  RSELDKLAISYTYPLAKTGIVAQIGSGSPPVVALRADMDALPLQELVEWEHKSKVDGKMH 131

Query: 125 ACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFG 184
            CGHD HTTMLLGAAKL+++RK  LKGTVR+LFQPAEEGGAGA HMIK+GALGD+EAIFG
Sbjct: 132 GCGHDAHTTMLLGAAKLLNERKHLLKGTVRLLFQPAEEGGAGASHMIKDGALGDAEAIFG 191

Query: 185 MHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQL 244
           MH++  IPTG+IAS+SGP  AA S F VK+EGRGGHAA+PH+ +DP+L AS  ILALQQL
Sbjct: 192 MHVNYKIPTGTIASLSGPVFAAASRFQVKIEGRGGHAAVPHNAVDPLLAASFAILALQQL 251

Query: 245 ISREADPLQS 254
           ISRE DPLQS
Sbjct: 252 ISRELDPLQS 261

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|49524064|emb|CAG32959.1| putative auxin-amidohydrolase precursor [Populus euphratica] Back     alignment and taxonomy information
>gi|255560590|ref|XP_002521309.1| IAA-amino acid hydrolase ILR1 precursor, putative [Ricinus communis] gi|223539494|gb|EEF41083.1| IAA-amino acid hydrolase ILR1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224134985|ref|XP_002321954.1| iaa-amino acid hydrolase 5 [Populus trichocarpa] gi|222868950|gb|EEF06081.1| iaa-amino acid hydrolase 5 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|269980523|gb|ACZ56436.1| IAA-amino acid hydrolase [Populus tomentosa] Back     alignment and taxonomy information
>gi|49524066|emb|CAG32960.1| putative auxin-amidohydrolase precursor [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|15239551|ref|NP_200225.1| IAA-amino acid hydrolase ILR1-like 3 [Arabidopsis thaliana] gi|75220092|sp|O81641.1|ILL3_ARATH RecName: Full=IAA-amino acid hydrolase ILR1-like 3; Flags: Precursor gi|3420801|gb|AAC31939.1| IAA-amino acid hydrolase homolog ILL3 [Arabidopsis thaliana] gi|10178163|dbj|BAB11576.1| IAA-amino acid hydrolase homolog ILL3 [Arabidopsis thaliana] gi|332009073|gb|AED96456.1| IAA-amino acid hydrolase ILR1-like 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|388511211|gb|AFK43667.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|357464257|ref|XP_003602410.1| IAA-amino acid hydrolase ILR1-like protein [Medicago truncatula] gi|95106139|gb|ABF55221.1| auxin conjugate hydrolase [Medicago truncatula] gi|355491458|gb|AES72661.1| IAA-amino acid hydrolase ILR1-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|225455181|ref|XP_002269226.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 5-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query260
TAIR|locus:2166557 428 ILL3 "AT5G54140" [Arabidopsis 0.896 0.544 0.738 1.1e-89
TAIR|locus:2017607 440 IAR3 "AT1G51760" [Arabidopsis 0.834 0.493 0.594 2.6e-70
TAIR|locus:2164976 439 ILL2 "AT5G56660" [Arabidopsis 0.834 0.494 0.617 7e-70
TAIR|locus:2017577 435 ILL5 "AT1G51780" [Arabidopsis 0.9 0.537 0.548 4.4e-68
TAIR|locus:2075382 442 ILR1 "AT3G02875" [Arabidopsis 0.892 0.524 0.568 7.2e-68
TAIR|locus:2165076 438 ILL1 "AT5G56650" [Arabidopsis 0.834 0.495 0.576 1.1e-64
TAIR|locus:2823614 464 ILL6 "IAA-leucine resistant (I 0.861 0.482 0.564 1.2e-60
TIGR_CMR|CJE_0708 396 CJE_0708 "carboxypeptidase" [C 0.834 0.547 0.468 2.6e-47
TIGR_CMR|SPO_2809 389 SPO_2809 "amidohydrolase famil 0.826 0.552 0.473 5.4e-47
TIGR_CMR|SPO_2808 387 SPO_2808 "amidohydrolase famil 0.811 0.545 0.472 4.8e-46
TAIR|locus:2166557 ILL3 "AT5G54140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
 Identities = 172/233 (73%), Positives = 198/233 (84%)

Query:    22 DEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK 81
             D+   NQ +  A  DK+WLVSVRRQIHENPELLFE H TSALIRRELD+LG+ Y+YPVAK
Sbjct:    23 DQEYPNQYLTEALGDKEWLVSVRRQIHENPELLFELHKTSALIRRELDELGVSYSYPVAK 82

Query:    82 TGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKL 141
             TGIVAQIGSG  PVV LRADMDALPLQELVEW+HKSKIDGKMHACGHD HTTMLLGAAKL
Sbjct:    83 TGIVAQIGSGYPPVVALRADMDALPLQELVEWDHKSKIDGKMHACGHDSHTTMLLGAAKL 142

Query:   142 IHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISG 201
             + +RK  L GTVR+LFQPAEEGGAGAFHMIKEGALGDSEAIFGMH+  G+PTG +A+ISG
Sbjct:   143 LSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEGALGDSEAIFGMHVHTGLPTGELATISG 202

Query:   202 PHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 254
             P LA+TS+F+V++ G+   ++  +S +DP+L ASS ILALQ +ISRE DPL S
Sbjct:   203 PALASTSIFSVRMSGKSPASSETYSCVDPVLAASSTILALQLIISREVDPLLS 255
GO:0006508 "proteolysis" evidence=ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=ISS
GO:0016787 "hydrolase activity" evidence=IEA
GO:0009850 "auxin metabolic process" evidence=ISS
GO:0010178 "IAA-amino acid conjugate hydrolase activity" evidence=ISS
TAIR|locus:2017607 IAR3 "AT1G51760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164976 ILL2 "AT5G56660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017577 ILL5 "AT1G51780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075382 ILR1 "AT3G02875" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165076 ILL1 "AT5G56650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2823614 ILL6 "IAA-leucine resistant (ILR)-like gene 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0708 CJE_0708 "carboxypeptidase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2809 SPO_2809 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2808 SPO_2808 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O81641ILL3_ARATH3, ., 5, ., 1, ., -0.70350.96530.5864yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ILL5
iaa-amino acid hydrolase 5 (404 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query260
cd08017 377 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-aceti 1e-145
cd03886 372 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 fa 1e-111
cd08019 372 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoa 1e-100
PLN02280 478 PLN02280, PLN02280, IAA-amino acid hydrolase 8e-96
COG1473 392 COG1473, AbgB, Metal-dependent amidase/aminoacylas 8e-95
PLN02693 437 PLN02693, PLN02693, IAA-amino acid hydrolase 9e-95
cd05666 373 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylas 1e-94
cd05669 372 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoac 6e-93
TIGR01891 363 TIGR01891, amidohydrolases, amidohydrolase 1e-87
cd08660 363 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 7e-80
cd05667 402 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylas 8e-77
cd05664 398 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylas 2e-76
cd08014 372 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylas 7e-72
cd05670 367 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoac 2e-56
cd08018 365 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoac 2e-52
cd05665 415 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Amin 2e-46
cd05668 374 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylas 2e-41
pfam01546 310 pfam01546, Peptidase_M20, Peptidase family M20/M25 7e-37
cd03887 358 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1- 1e-30
cd05672 358 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacyla 8e-26
cd05673 434 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacyla 3e-23
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 1e-20
cd09849 388 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacy 7e-20
cd08659 365 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo 2e-15
TIGR01910 375 TIGR01910, DapE-ArgE, acetylornithine deacetylase 7e-14
PRK08588 377 PRK08588, PRK08588, succinyl-diaminopimelate desuc 9e-08
COG0624 409 COG0624, ArgE, Acetylornithine deacetylase/Succiny 3e-07
PRK08651 394 PRK08651, PRK08651, succinyl-diaminopimelate desuc 1e-06
TIGR01892 364 TIGR01892, AcOrn-deacetyl, acetylornithine deacety 6e-06
cd03895 399 cd03895, M20_ArgE_DapE_like2, M20 Peptidases with 7e-06
cd05650 393 cd05650, M20_ArgE_DapE_like1, M20 Peptidases with 7e-05
cd08011 390 cd08011, M20_ArgE_DapE_like6, M20 Peptidases with 2e-04
cd05649 376 cd05649, M20_ArgE_DapE_like4, M20 Peptidases with 2e-04
PRK13983 400 PRK13983, PRK13983, diaminopimelate aminotransfera 0.001
TIGR01246 370 TIGR01246, dapE_proteo, succinyl-diaminopimelate d 0.001
cd08012 423 cd08012, M20_ArgE-related, M20 Peptidases with sim 0.002
>gnl|CDD|193564 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid hydrolase Back     alignment and domain information 
 Score =  411 bits (1058), Expect = e-145
 Identities = 161/215 (74%), Positives = 179/215 (83%)

Query: 40  LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLR 99
           LV +RR+IHENPEL FEEH TSALIRRELD LGIPY YPVAKTGIVA IGSGS PVV LR
Sbjct: 1   LVRIRREIHENPELAFEEHETSALIRRELDALGIPYRYPVAKTGIVATIGSGSPPVVALR 60

Query: 100 ADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQP 159
           ADMDALP+QELVEWEHKSK+DGKMHACGHD H TMLLGAAKL+  R+  LKGTVR+LFQP
Sbjct: 61  ADMDALPIQELVEWEHKSKVDGKMHACGHDAHVTMLLGAAKLLKAREHLLKGTVRLLFQP 120

Query: 160 AEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGG 219
           AEEGGAGA  MIKEGAL D EAIFGMH+D  +PTG++AS  GP LA    F   + G+GG
Sbjct: 121 AEEGGAGAKEMIKEGALDDVEAIFGMHVDPALPTGTVASRPGPILAGAGRFEAVIRGKGG 180

Query: 220 HAAMPHSTIDPILTASSVILALQQLISREADPLQS 254
           HAAMPH T+DP+L ASS ++ALQQL+SRE DPL S
Sbjct: 181 HAAMPHHTVDPVLAASSAVVALQQLVSRETDPLDS 215

Peptidase M20 family, Plant Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase (IAA-Asp hydrolase; IAAspH; IAAH; IAA amidohydrolase; EC 3.5.1.-) subfamily. IAAspH hydrolyzes indole-3-acetyl-N-aspartic acid (IAA or auxin) to indole-3-acetic acid. Genes encoding IAA-amidohydrolases were first cloned from Arabidopsis; ILR1, IAR3, ILL1 and ILL2 encode active IAA- amino acid hydrolases, and three additional amidohydrolase-like genes (ILL3, ILL5, ILL6) have been isolated. In higher plants, the growth regulator indole-3-acetic acid (IAA or auxin) is found both free and conjugated via amide bonding to a variety of amino acids and peptides, and via an ester linkage to carbohydrates. IAA-Asp conjugates are involved in homeostatic control, protection, storing and subsequent use of free IAA. IAA-Asp is also found in some plants as a unique intermediate for entering into IAA non-decarboxylative oxidative pathway. IAA amidohydrolase cleaves the amide bond between the auxin and the conjugated amino acid. Enterobacter agglomerans IAAspH has very strong enzyme activity and substrate specificity towards IAA-Asp, although its substrate affinity is weaker compared to Arabidopsis enzymes of the ILR1 gene family. Enhanced IAA-hydrolase activity has been observed during clubroot disease in Chinese cabbage. Length = 377
>gnl|CDD|193507 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family Back     alignment and domain information
>gnl|CDD|193566 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|215158 PLN02280, PLN02280, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|224390 COG1473, AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>gnl|CDD|178296 PLN02693, PLN02693, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193542 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193545 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoacyclase-1 YxeP-like proteins, including YxeP, YtnL, YjiB and HipO2 Back     alignment and domain information
>gnl|CDD|233621 TIGR01891, amidohydrolases, amidohydrolase Back     alignment and domain information
>gnl|CDD|193571 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1-like family Back     alignment and domain information
>gnl|CDD|193543 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193540 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193562 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193546 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins Back     alignment and domain information
>gnl|CDD|193565 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoacylase 1 amhX_like subfamily Back     alignment and domain information
>gnl|CDD|193541 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase from bacteria and archaea Back     alignment and domain information
>gnl|CDD|193544 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40 Back     alignment and domain information
>gnl|CDD|193508 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193547 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacylase 1-like protein 2-like, amidohydrolase subfamily Back     alignment and domain information
>gnl|CDD|193548 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information
>gnl|CDD|193573 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like Back     alignment and domain information
>gnl|CDD|233632 TIGR01910, DapE-ArgE, acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>gnl|CDD|181490 PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|223697 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|236323 PRK08651, PRK08651, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|130947 TIGR01892, AcOrn-deacetyl, acetylornithine deacetylase (ArgE) Back     alignment and domain information
>gnl|CDD|193515 cd03895, M20_ArgE_DapE_like2, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|193527 cd05650, M20_ArgE_DapE_like1, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|193559 cd08011, M20_ArgE_DapE_like6, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|193526 cd05649, M20_ArgE_DapE_like4, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|237578 PRK13983, PRK13983, diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|162269 TIGR01246, dapE_proteo, succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>gnl|CDD|193560 cd08012, M20_ArgE-related, M20 Peptidases with simlarity to acetylornithine deacetylases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 260
PLN02693 437 IAA-amino acid hydrolase 100.0
PLN02280 478 IAA-amino acid hydrolase 100.0
COG1473 392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 100.0
PRK06915 422 acetylornithine deacetylase; Validated 100.0
TIGR01891 363 amidohydrolases amidohydrolase. This model represe 100.0
PRK08588 377 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK06837 427 acetylornithine deacetylase; Provisional 100.0
PRK13013 427 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK13004 399 peptidase; Reviewed 100.0
TIGR03526 395 selenium_YgeY putative selenium metabolism hydrola 100.0
TIGR03320 395 ygeY M20/DapE family protein YgeY. Members of this 100.0
PRK13983 400 diaminopimelate aminotransferase; Provisional 100.0
PRK07338 402 hypothetical protein; Provisional 100.0
PRK08201 456 hypothetical protein; Provisional 100.0
PRK06133 410 glutamate carboxypeptidase; Reviewed 100.0
TIGR01892 364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 100.0
PRK07522 385 acetylornithine deacetylase; Provisional 100.0
PRK13009 375 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK08596 421 acetylornithine deacetylase; Validated 100.0
TIGR01246 370 dapE_proteo succinyl-diaminopimelate desuccinylase 100.0
PRK07473 376 carboxypeptidase; Provisional 100.0
PRK05111 383 acetylornithine deacetylase; Provisional 100.0
PRK09133 472 hypothetical protein; Provisional 100.0
TIGR01910 375 DapE-ArgE acetylornithine deacetylase or succinyl- 100.0
PRK07907 449 hypothetical protein; Provisional 100.0
PRK06446 436 hypothetical protein; Provisional 100.0
TIGR01880 400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 100.0
TIGR01900 373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 100.0
PRK09104 464 hypothetical protein; Validated 100.0
PRK04443 348 acetyl-lysine deacetylase; Provisional 100.0
PRK13007 352 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK08651 394 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK07906 426 hypothetical protein; Provisional 100.0
PRK08652 347 acetylornithine deacetylase; Provisional 100.0
TIGR01886 466 dipeptidase dipeptidase PepV. This model represent 100.0
PRK07318 466 dipeptidase PepV; Reviewed 100.0
PRK07205 444 hypothetical protein; Provisional 100.0
PRK13381 404 peptidase T; Provisional 100.0
PRK08737 364 acetylornithine deacetylase; Provisional 100.0
COG0624 409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 100.0
PRK05469 408 peptidase T; Provisional 99.98
PRK00466 346 acetyl-lysine deacetylase; Validated 99.98
PRK08262 486 hypothetical protein; Provisional 99.98
PRK07079 469 hypothetical protein; Provisional 99.98
TIGR01882 410 peptidase-T peptidase T. This model represents a t 99.97
PRK06156 520 hypothetical protein; Provisional 99.97
TIGR01883 361 PepT-like peptidase T-like protein. This model rep 99.97
TIGR01887 447 dipeptidaselike dipeptidase, putative. This model 99.97
TIGR01902 336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 99.96
PRK15026 485 aminoacyl-histidine dipeptidase; Provisional 99.96
TIGR01893 477 aa-his-dipept aminoacyl-histidine dipeptidase. 99.96
PRK12892 412 allantoate amidohydrolase; Reviewed 99.96
PRK09290 413 allantoate amidohydrolase; Reviewed 99.96
PRK12893 412 allantoate amidohydrolase; Reviewed 99.95
KOG2275 420 consensus Aminoacylase ACY1 and related metalloexo 99.95
PRK12891 414 allantoate amidohydrolase; Reviewed 99.95
PRK12890 414 allantoate amidohydrolase; Reviewed 99.95
PRK08554 438 peptidase; Reviewed 99.94
TIGR01879 401 hydantase amidase, hydantoinase/carbamoylase famil 99.93
KOG2276 473 consensus Metalloexopeptidases [Amino acid transpo 99.92
PRK13799 591 unknown domain/N-carbamoyl-L-amino acid hydrolase 99.92
PRK13590 591 putative bifunctional OHCU decarboxylase/allantoat 99.9
TIGR03176 406 AllC allantoate amidohydrolase. This enzyme cataly 99.89
COG4187 553 RocB Arginine degradation protein (predicted deacy 99.8
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 99.66
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 99.59
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 99.59
PRK09961344 exoaminopeptidase; Provisional 99.49
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 99.43
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 99.4
COG2195 414 PepD Di- and tripeptidases [Amino acid transport a 99.39
PRK09864356 putative peptidase; Provisional 99.37
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 98.62
PF07687111 M20_dimer: Peptidase dimerisation domain This fami 98.52
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 98.29
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 97.92
KOG3946338 consensus Glutaminyl cyclase [Posttranslational mo 97.38
KOG2526 555 consensus Predicted aminopeptidases - M20/M25/M40 97.32
COG2234435 Iap Predicted aminopeptidases [General function pr 97.04
KOG2195 702 consensus Transferrin receptor and related protein 96.95
PF05450234 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri 95.59
PF00883311 Peptidase_M17: Cytosol aminopeptidase family, cata 93.15
cd00433468 Peptidase_M17 Cytosol aminopeptidase family, N-ter 93.09
PRK00913483 multifunctional aminopeptidase A; Provisional 92.1
KOG2597513 consensus Predicted aminopeptidase of the M17 fami 90.36
PRK05015424 aminopeptidase B; Provisional 88.95
PTZ00412 569 leucyl aminopeptidase; Provisional 88.85
COG0260485 PepB Leucyl aminopeptidase [Amino acid transport a 80.31
>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information 
Probab=100.00  E-value=2e-44  Score=330.65  Aligned_cols=254  Identities=54%  Similarity=0.864  Sum_probs=213.0

Q ss_pred             HHHHhcceee-ccCCccchHHHHHHHHHHHh--hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCc
Q 024905            6 LLLLLPITYL-TTTTAVDEILTNQVMISAQQ--DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT   82 (260)
Q Consensus         6 ~~~~~~~~~~-~~~~~~~~~~~~~i~~~i~~--~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~   82 (260)
                      ++++|+.+.+ +|-.-.-+..+.++.+..++  ..+++++++++|+++||+|++|.++++||.++|+++|++++....++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~   91 (437)
T PLN02693         12 LLLLLRVSSESPWIAGDVSQIQINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAIT   91 (437)
T ss_pred             HHHHHHhccCCCccccchhhhHHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCc
Confidence            4444555543 23221123344445544444  55789999999999999999999999999999999999987545689


Q ss_pred             eEEEEEcCCCCcEEEEEeccCCCCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCC
Q 024905           83 GIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE  162 (260)
Q Consensus        83 nlia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE  162 (260)
                      |++|+++++++|+|+|+||+||||+++..+|++++..+|++||||||++++++++|+++|++.+..++++|.|+|++|||
T Consensus        92 ~via~~g~~~g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE  171 (437)
T PLN02693         92 GIIGYIGTGEPPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEE  171 (437)
T ss_pred             EEEEEECCCCCCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEccc
Confidence            99999964556999999999999998888899999889999999999999999999999998876778999999999999


Q ss_pred             CCCChHHHHHcCCCCCCceEEEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHH
Q 024905          163 GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQ  242 (260)
Q Consensus       163 ~g~G~~~~~~~g~~~~~d~~i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~  242 (260)
                      ++.|++.++++|.+++.|+++++|.++..+.|.+..+.|..++|..+++|+++|+++|++.|+.|+|||..+++++..|+
T Consensus       172 ~~~Ga~~~i~~g~~~~~~~iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~  251 (437)
T PLN02693        172 GLSGAKKMREEGALKNVEAIFGIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQ  251 (437)
T ss_pred             chhhHHHHHHCCCCCCCCEEEEEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHH
Confidence            66899999999987767899988887777778776666777889999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCcceee
Q 024905          243 QLISREADPLQSLRGNC  259 (260)
Q Consensus       243 ~~~~~~~~p~~~~~~~~  259 (260)
                      ++..+..+|+.+.++++
T Consensus       252 ~~~~~~~~~~~~~ti~v  268 (437)
T PLN02693        252 QLVSRETDPLDSKVVTV  268 (437)
T ss_pred             HHhcccCCCCCCcEEEE
Confidence            99877777776666554

>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 [] Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch Back     alignment and domain information
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains Back     alignment and domain information
>PRK00913 multifunctional aminopeptidase A; Provisional Back     alignment and domain information
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only] Back     alignment and domain information
>PRK05015 aminopeptidase B; Provisional Back     alignment and domain information
>PTZ00412 leucyl aminopeptidase; Provisional Back     alignment and domain information
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query260
1xmb_A 418 X-ray Structure Of Iaa-aminoacid Hydrolase From Ara 1e-76
1ysj_A 404 Crystal Structure Of Bacillus Subtilis Yxep Protein 1e-49
4ewt_A 392 The Crystal Structure Of A Putative Aminohydrolase 4e-32
3io1_A 445 Crystal Structure Of Aminobenzoyl-Glutamate Utiliza 4e-17
3ram_A 394 Crystal Structure Of Hmra Length = 394 3e-07
3ic1_A 377 Crystal Structure Of Zinc-Bound Succinyl-Diaminopim 3e-05
>pdb|1XMB|A Chain A, X-ray Structure Of Iaa-aminoacid Hydrolase From Arabidopsis Thaliana Gene At5g56660 Length = 418 Back     alignment and structure 
Iteration: 1

 Score =  282 bits (721), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 134/217 (61%), Positives = 166/217 (76%)
Query: 38  DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVV 97
           DW+V +RR+IHENPEL +EE  TS LIR EL+ +GI Y YPVA TG++  IG+G  P V 
Sbjct: 28  DWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVA 87
Query: 98  LRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILF 157
           LRADMDALP+QE VEWEHKSKI GKMHACGHD H TMLLGAAK++H+ +  L+GTV ++F
Sbjct: 88  LRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIF 147
Query: 158 QPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGR 217
           QPAEEG +GA  M +EGAL + EAIFG+H+   IP G  AS +G  LA   VF   + G+
Sbjct: 148 QPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGK 207
Query: 218 GGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 254
           GGHAA+P  TIDP++ ASS++L+LQQL+SRE DPL S
Sbjct: 208 GGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDS 244
>pdb|1YSJ|A Chain A, Crystal Structure Of Bacillus Subtilis Yxep Protein (Apc1829), A Dinuclear Metal Binding Peptidase From M20 Family Length = 404 Back     alignment and structure
>pdb|4EWT|A Chain A, The Crystal Structure Of A Putative Aminohydrolase From Methicillin Resistant Staphylococcus Aureus Length = 392 Back     alignment and structure
>pdb|3IO1|A Chain A, Crystal Structure Of Aminobenzoyl-Glutamate Utilization Protein From Klebsiella Pneumoniae Length = 445 Back     alignment and structure
>pdb|3RAM|A Chain A, Crystal Structure Of Hmra Length = 394 Back     alignment and structure
>pdb|3IC1|A Chain A, Crystal Structure Of Zinc-Bound Succinyl-Diaminopimelate Desuccinylase From Haemophilus Influenzae Length = 377 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query260
1xmb_A 418 IAA-amino acid hydrolase homolog 2; structural gen 1e-132
1ysj_A 404 Protein YXEP; M20 family peptidase, dinuclear meta 1e-121
3io1_A 445 Aminobenzoyl-glutamate utilization protein; peptid 2e-94
3ram_A 394 HMRA protein; two-domain, catalytic (alpha-beta-al 5e-30
3pfo_A 433 Putative acetylornithine deacetylase; metal bindin 1e-10
3tx8_A 369 Succinyl-diaminopimelate desuccinylase; peptidase, 4e-09
3ct9_A 356 Acetylornithine deacetylase; NP_812461.1, A putati 6e-09
1cg2_A 393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 1e-07
3rza_A 396 Tripeptidase; phosphorylase/hydrolase-like, struct 2e-05
2rb7_A 364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 3e-05
3ife_A 434 Peptidase T; metallopeptidase, aminopeptidase, hyd 4e-04
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Length = 418 Back     alignment and structure
 Score =  378 bits (974), Expect = e-132
 Identities = 134/222 (60%), Positives = 168/222 (75%)

Query: 33  AQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGS 92
           + +  DW+V +RR+IHENPEL +EE  TS LIR EL+ +GI Y YPVA TG++  IG+G 
Sbjct: 23  SPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGE 82

Query: 93  RPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGT 152
            P V LRADMDALP+QE VEWEHKSKI GKMHACGHD H TMLLGAAK++H+ +  L+GT
Sbjct: 83  PPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGT 142

Query: 153 VRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNV 212
           V ++FQPAEEG +GA  M +EGAL + EAIFG+H+   IP G  AS +G  LA   VF  
Sbjct: 143 VVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEA 202

Query: 213 KVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 254
            + G+GGHAA+P  TIDP++ ASS++L+LQQL+SRE DPL S
Sbjct: 203 VITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDS 244
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Length = 404 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Length = 445 Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Length = 394 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Length = 433 Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Length = 369 Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Length = 396 Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Length = 364 Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Length = 434 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query260
1xmb_A 418 IAA-amino acid hydrolase homolog 2; structural gen 100.0
3io1_A 445 Aminobenzoyl-glutamate utilization protein; peptid 100.0
1ysj_A 404 Protein YXEP; M20 family peptidase, dinuclear meta 100.0
3pfo_A 433 Putative acetylornithine deacetylase; metal bindin 100.0
3ram_A 394 HMRA protein; two-domain, catalytic (alpha-beta-al 100.0
3ct9_A 356 Acetylornithine deacetylase; NP_812461.1, A putati 100.0
1cg2_A 393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 100.0
1vgy_A 393 Succinyl-diaminopimelate desuccinylase; structural 100.0
3isz_A 377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 100.0
3dlj_A 485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 100.0
2pok_A 481 Peptidase, M20/M25/M40 family; M20 family peptidas 100.0
3pfe_A 472 Succinyl-diaminopimelate desuccinylase; metal bind 100.0
3tx8_A 369 Succinyl-diaminopimelate desuccinylase; peptidase, 100.0
3khx_A 492 Putative dipeptidase sacol1801; DAPE, metallopepti 100.0
2zog_A 479 Cytosolic non-specific dipeptidase; metallopeptida 100.0
3rza_A 396 Tripeptidase; phosphorylase/hydrolase-like, struct 100.0
3ife_A 434 Peptidase T; metallopeptidase, aminopeptidase, hyd 100.0
2rb7_A 364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 100.0
2f7v_A 369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 100.0
3gb0_A 373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 100.0
1fno_A 417 Peptidase T; metallo peptidase, protease, hydrolas 100.0
1lfw_A 470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 99.97
3mru_A 490 Aminoacyl-histidine dipeptidase; metalloprotease, 99.97
2qyv_A 487 XAA-His dipeptidase; YP_718209.1, structural genom 99.97
1z2l_A 423 Allantoate amidohydrolase; ALLC, purine cataboli a 99.96
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 99.96
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 99.96
2v8h_A 474 Beta-alanine synthase; amidohydrolase, alpha and b 99.96
3n5f_A 408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 99.96
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 99.95
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 99.85
2gre_A349 Deblocking aminopeptidase; structural genomi prote 99.82
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 99.79
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.79
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 99.79
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.75
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 99.73
2wzn_A 354 TET3, 354AA long hypothetical operon protein FRV; 99.7
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 99.69
1vho_A346 Endoglucanase; structural genomics, unknown functi 99.68
1ylo_A348 Hypothetical protein SF2450; structural genomics, 99.67
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 99.65
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 99.63
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 99.6
3kl9_A 355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 99.48
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 99.42
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 99.39
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 99.37
2vpu_A 354 TET3, 354AA long hypothetical operon protein FRV; 99.36
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 99.36
3isx_A 343 Endoglucanase; TM1050, structural genomics, joint 99.31
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 98.9
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 98.85
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 98.47
3kas_A 640 Transferrin receptor protein 1; transferrin recept 98.44
3k9t_A 435 Putative peptidase; structural genomics, joint cen 93.79
1y7e_A 458 Probable M18-family aminopeptidase 1; aminopeptida 91.63
2hc9_A491 Leucine aminopeptidase 1; carbonate, structural ge 90.47
2glf_A 450 Probable M18-family aminopeptidase 1; putative, NY 88.63
2ijz_A 428 Probable M18-family aminopeptidase 2; putative ami 88.39
3h8g_F497 Cytosol aminopeptidase; hydrolase, manganese, meta 87.45
1gyt_A503 Cytosol aminopeptidase; hydrolase, DNA recombinati 87.42
3jru_B490 Probable cytosol aminopeptidase; bacterial blight, 87.21
3pei_A486 Cytosol aminopeptidase; structural genomics, cente 86.98
1lam_A484 Leucine aminopeptidase; exopeptidase, metallopepti 86.89
3kzw_A515 Cytosol aminopeptidase; hydrolase, manganese bindi 86.44
4efd_A522 Aminopeptidase; structural genomics, structural ge 86.21
3ij3_A482 Cytosol aminopeptidase; PEPB, peptidase M17 family 86.1
3kr4_A528 M17 leucyl aminopeptidase; protease, hydrolase; HE 80.87
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
Probab=100.00  E-value=3.7e-43  Score=320.15  Aligned_cols=232  Identities=58%  Similarity=0.962  Sum_probs=194.2

Q ss_pred             HHHHHHHHHHhhH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEeecCCceEEEEEcCCCCcEEEEEecc
Q 024905           25 LTNQVMISAQQDK--DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADM  102 (260)
Q Consensus        25 ~~~~i~~~i~~~~--~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nlia~~~~~~~~~i~l~~H~  102 (260)
                      |++++.+++++++  +++++++++|++|||+|++|.++++||.++|+++|++++..+..+|+++++++++.|+|+|+|||
T Consensus        13 ~~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~   92 (418)
T 1xmb_A           13 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADM   92 (418)
T ss_dssp             ---CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEEC
T ss_pred             HHHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEecc
Confidence            5667888899988  99999999999999999999999999999999999998875557999999976522899999999


Q ss_pred             CCCCCCCCCCCccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCCCChHHHHHcCCCCCCceE
Q 024905          103 DALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAI  182 (260)
Q Consensus       103 DtVp~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~g~~~~~d~~  182 (260)
                      ||||+++...|||.+.++|++||||+|++++++|+|++.|++.+.+++++|.|+|+++||++.|++++++++.++++|++
T Consensus        93 D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~  172 (418)
T 1xmb_A           93 DALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAI  172 (418)
T ss_dssp             CCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEE
T ss_pred             cccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEE
Confidence            99999887888998888999999999999999999999999987778999999999999933899999998877668999


Q ss_pred             EEecccCCCCCcceEeecccccceeeEEEEEEEccCCCcCCCCCCcCHHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 024905          183 FGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLR  256 (260)
Q Consensus       183 i~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~~~~  256 (260)
                      +++|.++++|+|.+....+.+++|..+++|+++|+++|+|.|+.|+|||..+++++..|+.+..++.+|..+.+
T Consensus       173 i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t  246 (418)
T 1xmb_A          173 FGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKV  246 (418)
T ss_dssp             EEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEE
T ss_pred             EEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcE
Confidence            99887766778876555666789999999999999999999999999999999999999988766556554434
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* Back     alignment and structure
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Back     alignment and structure
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} Back     alignment and structure
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp} Back     alignment and structure
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* Back     alignment and structure
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} Back     alignment and structure
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} Back     alignment and structure
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} Back     alignment and structure
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 260
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 2e-50
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 2e-44
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 6e-14
d1lfwa2196 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactoba 6e-13
d1xmba2119 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mo 3e-08
d1ysja2115 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subti 3e-07
d1vgya2113 d.58.19.1 (A:181-293) Succinyl-diaminopimelate des 7e-05
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  164 bits (416), Expect = 2e-50
 Identities = 107/213 (50%), Positives = 139/213 (65%), Gaps = 3/213 (1%)

Query: 33  AQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGS 92
           + +  DW+V +RR+IHENPEL +EE  TS LIR EL+ +GI Y YPVA TG++  IG+G 
Sbjct: 8   SPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGE 67

Query: 93  RPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGT 152
            P V LRADMDALP+QE VEWEHKSKI GKMHACGHD H TMLLGAAK++H+ +  L+GT
Sbjct: 68  PPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGT 127

Query: 153 VRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNV 212
           V ++FQPAEEG +GA  M +EGAL + EAIFG+H+   IP G  AS +G  L   +    
Sbjct: 128 VVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLTVNNKDLY 187

Query: 213 KVEGRGGHAAMPHS---TIDPILTASSVILALQ 242
           K   +     +         P++ +       +
Sbjct: 188 KQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAE 220
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 196 Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119 Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 115 Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Length = 113 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query260
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 100.0
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 99.98
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 99.97
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 99.96
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 99.95
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.93
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.83
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.82
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.8
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.78
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.74
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.72
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 99.59
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 99.49
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 99.48
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 99.47
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 99.39
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 99.29
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 99.26
d1xmba2119 IAA-amino acid hydrolase {Mouse-ear cress (Arabido 98.93
d1ysja2115 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 98.84
d1vgya2113 Succinyl-diaminopimelate desuccinylase {Neisseria 98.84
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 98.59
d1cg2a2113 Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 98.44
d1lfwa2196 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 98.4
d1z2la2117 Allantoate amidohydrolase AllC {Escherichia coli [ 98.3
d1r3na2116 Peptidase-like beta-alanine synthase {Yeast (Sacch 98.03
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 95.01
d1y0ya2 255 Frv operon protein FrvX, catalytic domain {Pyrococ 94.82
d1fnoa3113 Peptidase T (tripeptidase) {Salmonella typhimurium 93.5
d1lama1325 Leucine aminopeptidase, C-terminal domain {Cow (Bo 88.83
d1gyta2325 Leucine aminopeptidase, C-terminal domain {Escheri 82.25
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Protein YxeP
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=3.6e-33  Score=235.05  Aligned_cols=188  Identities=43%  Similarity=0.677  Sum_probs=166.7

Q ss_pred             hhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCCeEee-cCCceEEEEEcCC-CCcEEEEEeccCCCCCCCCCC
Q 024905           35 QDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP-VAKTGIVAQIGSG-SRPVVVLRADMDALPLQELVE  112 (260)
Q Consensus        35 ~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~~nlia~~~~~-~~~~i~l~~H~DtVp~~~~~~  112 (260)
                      +..++++++.|+|+++|+++++|.+++++|.++|+++|+++... ...+++++.++++ ++|+|+|.+|||.+|..+..+
T Consensus         2 ~~~~~li~~rr~lh~~PEl~~~E~~T~~~i~~~L~~~G~~v~~~~~~~tgv~a~~~g~~~gp~Ialrad~DALp~~e~~~   81 (261)
T d1ysja1           2 AFHTRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTN   81 (261)
T ss_dssp             HHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCCC
T ss_pred             chHHHHHHHHHHHHhCcCcCChHHHHHHHHHHHHHHCCCeEEEecCCceEEEEEECCCCcCceEEEEecccccchhhhcc
Confidence            45688999999999999999999999999999999999998543 3467899999765 689999999999999988889


Q ss_pred             CccccccCCccccCCCcHHHHHHHHHHHHHHhccCCCCceEEEEeecCCCCCCChHHHHHcCCCCCCceEEEecccCCCC
Q 024905          113 WEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIP  192 (260)
Q Consensus       113 w~~~~~~~g~~~g~G~kg~~a~~l~a~~~L~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~g~~~~~d~~i~~~~~~~~~  192 (260)
                      ++|.+..+|.+|+||+++.++++++++..|.+...+++++|+|+|+++||.+.|++.|+++|.++++|+++.+|+.|+.|
T Consensus        82 ~~~~s~~~G~~HaCGHd~h~a~~lgaA~~l~~~~~~~~G~v~lifqPaEE~~~Ga~~mi~~G~~d~vd~~~~~H~~p~~p  161 (261)
T d1ysja1          82 LPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLP  161 (261)
T ss_dssp             CTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTSC
T ss_pred             CccccccCCceeccCcchHHHHHHHHHHHHHHhcccCCCeEEEecccCcccccchHHHHHcCCccccCeeEEEccCCCCC
Confidence            99999899999999999999999999999998877899999999999999999999999999999999999999999999


Q ss_pred             CcceEeecccccceeeEEEEEEEccCCCcC
Q 024905          193 TGSIASISGPHLAATSVFNVKVEGRGGHAA  222 (260)
Q Consensus       193 ~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~  222 (260)
                      .|.+.++.|........+.+.+.|++.|++
T Consensus       162 ~G~v~~~~G~~~A~~~~~~~~~~~~~~~~a  191 (261)
T d1ysja1         162 VGTIGVKEGPLMASVQNDGTFLNAASEAAA  191 (261)
T ss_dssp             TTEEEECSEEEECCEEECGGGHHHHHHHHH
T ss_pred             CeEEEEccChhhcccceeEEEeCccchhhh
Confidence            999998888777766565554444444443
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} Back     information, alignment and structure