Citrus Sinensis ID: 025007

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGCAECGPWN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccccccccccEEEEEccHHHccccccccEEEEEEEccccccccccEEEEEEEccccccccccccHHHHHHHHccccHHHHHHcccccEEEEEEcccccccEEEEEEEcccccccEEEEEEEEcccEEEEEEEEEEEcccccEEEcccccccEEEEcccccccEEEEEEEEEccccEEEEEccccccccccccEEEcccccEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEEcccccccccccccEEEEEcccccccccccccccccccccccccccccccHHHcccccccccEEEEEEccccccccccEEEEEEcccccccccccccHHHHHHHHcccccHHHHHccEEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEccccccEEEEEEEccccccEEEccccccHccccccccccccEEEEEEEEcccccEEEEccccccccccccEEEccEEEcccccccccccccccc
Coil and Loop (DISEMBL)
MAILLCFLFFLLssatacdhcvhqskvsyfsktsalskgacgygslalglgsghiaaavpsiykngaacggtcfqvrcknralcsrkgtRVIVTDLnhnnktdmVLSRRAFRALANKGMDNEILKQRAVDveyirvpceykhhnlAVRVeessknpnYLAIKVLYQGGKTEILGVVLseygspvridMRRKFgavwetdrapkgplqfgfpivqgfdvkwiwaknpvpadwkigvtydagvqitdvdftdgcaecgpwn
Flexible Loop (DISEMBL)
MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNralcsrkgtrvivtdlnhnnktdmvlsRRAFRALAnkgmdneilkqRAVDVEYIRVPCEYKHHNLAVrveessknpNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAvwetdrapkgplqfgfPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGCAECGPWN
Low Complexity Region (SEG)
MAIllcflffllSSATACDHCVHQSKVSYFSKTSALSKgacgygslalglgsghiaaaVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGCAECGPWN
Disordered region (IsUnstruct)
**ILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGCAECG***
Disordered Region (DISOPRED)
MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGCAE*****
Disordered Region (DISEMBL)
MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGCAECGPWN
Disordered Region (DISPRO)
MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGCAEC****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGCAECGPWN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	259	2.2.26 [Sep-21-2011]
Q9LZT5	263	Expansin-like A3 OS=Arabi	yes	no	0.980	0.965	0.579	3e-71
Q9SVE5	265	Expansin-like A2 OS=Arabi	no	no	0.938	0.916	0.582	4e-70
Q9LZT4	265	Expansin-like A1 OS=Arabi	no	no	0.980	0.958	0.551	3e-69
Q10S70	279	Expansin-like A1 OS=Oryza	yes	no	0.922	0.856	0.469	5e-60
Q7XCL0	275	Expansin-like A2 OS=Oryza	no	no	0.976	0.92	0.471	8e-59
Q8H274	276	Expansin-like A3 OS=Oryza	no	no	0.922	0.865	0.437	2e-49
Q5Z980	313	Expansin-like A4 OS=Oryza	no	no	0.888	0.734	0.361	6e-40
O23547	250	Expansin-like B1 OS=Arabi	no	no	0.934	0.968	0.353	2e-39
Q850K7	256	Expansin-like B1 OS=Oryza	no	no	0.918	0.929	0.356	4e-35
Q7XT40	264	Expansin-B15 OS=Oryza sat	no	no	0.768	0.753	0.35	5e-23

>sp|Q9LZT5|EXLA3_ARATH Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1

 Score =  268 bits (684), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/259 (57%), Positives = 183/259 (70%), Gaps = 5/259 (1%)

Query: 4   LLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIY 63
           L+  +F   SS  ACD C+H+SK SYFS  SALS GAC YG +A    +GHIAAA+PSIY
Sbjct: 7   LIVVIFLFSSSVNACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIY 66

Query: 64  KNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANK--GMDN 121
           K+GA CG  CFQVRCKN  LC+ KGT V+VTDLN +N+TD+VLS RAFRA+A    G+D 
Sbjct: 67  KDGAGCGA-CFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDK 125

Query: 122 EILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYG 181
            +LKQ  VDVEY RVPC Y   NL VRVEE+SK PNYLAIK+LYQGG+TE++G+ ++  G
Sbjct: 126 YLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVG 185

Query: 182 SPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGV 241
           S     M R  GAVW TD+ P G LQF F +  G+D K +W+K  +PA+W  G  YDAGV
Sbjct: 186 SSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGV 245

Query: 242 QITDVDFTDGCAECGP-WN 259
           QITD+   +GC  CG  WN
Sbjct: 246 QITDIA-QEGCDTCGHIWN 263

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SVE5|EXLA2_ARATH Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1

 Score =  264 bits (675), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 145/249 (58%), Positives = 181/249 (72%), Gaps = 6/249 (2%)

Query: 15  ATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCF 74
           A ACD C+H SK +YFS  SALS GAC YGS+A G  +GHIAAA+PSIYK+G+ CG  CF
Sbjct: 19  AAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGA-CF 77

Query: 75  QVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANK--GMDNEILKQRAVDVE 132
           QVRCKN  LCS KGT VIVTDLN  N+TD+VLS RAFRA+A    G D ++LKQ  VD+E
Sbjct: 78  QVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIE 137

Query: 133 YIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKF 192
           Y RVPC+Y +  + VRVEESSKNPNYLAIK+LYQGG+TE++ + +++ GS     M R  
Sbjct: 138 YRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSH 197

Query: 193 GAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGC 252
           GAVW TD+ P G LQF F +  G+D K +W++  +PA+W+ G +YDAGVQITD+   +GC
Sbjct: 198 GAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDAGVQITDI-AQEGC 256

Query: 253 AECGP--WN 259
             C    WN
Sbjct: 257 DPCDDHIWN 265

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZT4|EXLA1_ARATH Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1

 Score =  261 bits (668), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 144/261 (55%), Positives = 187/261 (71%), Gaps = 7/261 (2%)

Query: 4   LLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIY 63
           L+  +F   SS  ACD C+H+SK +YFS  SALS GAC YGS+A    +GHIAAA+PSIY
Sbjct: 7   LIVVIFLFSSSVNACDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPSIY 66

Query: 64  KNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANK--GMDN 121
           K+GA CG  CFQVRCKN  LCS KGT V++TDLN +N+TD+VLS RAFRA+A    G D 
Sbjct: 67  KDGAGCGA-CFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADK 125

Query: 122 EILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYG 181
           ++LKQ  VD+EY RVPC+Y + N+ VRVEE+SK PNYL IK+LYQGG+TE++ + +++ G
Sbjct: 126 DLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVG 185

Query: 182 -SPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG 240
            SP    M R  GAVW TD+ P G +QF F +  G+D K IW+++ +P++W+ G  YDAG
Sbjct: 186 SSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYDAG 245

Query: 241 VQITDVDFTDGCAECGP--WN 259
           VQITD+   +GC  C    WN
Sbjct: 246 VQITDIA-QEGCDPCDAHIWN 265

Arabidopsis thaliana (taxid: 3702)

>sp|Q10S70|EXLA1_ORYSJ Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1

 Score =  231 bits (588), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 114/243 (46%), Positives = 155/243 (63%), Gaps = 4/243 (1%)

Query: 15  ATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGL-GSGHIAAAVPSIYKNGAACGGTC 73
           A+ CD CV +S+ +Y++ +  L+ G+CGYG+ A    G G +AAA P++Y+ G  CG  C
Sbjct: 33  ASGCDRCVRRSRAAYYTSSLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCG-AC 91

Query: 74  FQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEY 133
           +QVRCK++ LCS  G RV+VTD    N+T +VLS  AF A+A  GM   + +  AVDVEY
Sbjct: 92  YQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEY 151

Query: 134 IRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFG 193
            RVPCEY+H +L+VRV+E S+ PN L I  LYQGG+T+I+ V +++ GS     M R+ G
Sbjct: 152 KRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHG 211

Query: 194 AVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPV-PADWKIGVTYDAGVQITDVDFTDGC 252
             W    AP GPLQ    +  G+D KW+WA   V P  W+ G  YD GVQITD+   +GC
Sbjct: 212 PSWSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQITDIA-QEGC 270

Query: 253 AEC 255
             C
Sbjct: 271 FPC 273

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XCL0|EXLA2_ORYSJ Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1

 Score =  227 bits (578), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 124/263 (47%), Positives = 163/263 (61%), Gaps = 10/263 (3%)

Query: 1   MAILLCFLFFLL-----SSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHI 55
           MA     LFF++     S  + CD CV +SK  +   + AL+ G+CGYGSLA     GH+
Sbjct: 9   MASASVVLFFVVVGMSASMVSGCDRCVRRSKAGFRDSSIALNAGSCGYGSLAASFNGGHL 68

Query: 56  AAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTD-LNHNNKTDMVLSRRAFRAL 114
           AAA P++++ G  CG  CFQVRCK+  LCS  G +V+VTD     N+TD+VLS  A+ A+
Sbjct: 69  AAASPALFRGGVGCG-ACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAM 127

Query: 115 ANKGMDNEILKQRAVDVEYIRVPCEYKH-HNLAVRVEESSKNPNYLAIKVLYQGGKTEIL 173
           A  GM  ++  +RAVDVEY RVPCEY    NL++RVEE S+ P  L+I+ LYQGG+T+I+
Sbjct: 128 ARPGMAAQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIV 187

Query: 174 GVVLSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPV-PADWK 232
            V ++  GS     M R +G  W T +AP GPLQF   +  G+D KW+WA   V P  W 
Sbjct: 188 AVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWT 247

Query: 233 IGVTYDAGVQITDVDFTDGCAEC 255
            G  YDAGVQI DV   +GC  C
Sbjct: 248 AGRVYDAGVQIADVA-QEGCYPC 269

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H274|EXLA3_ORYSJ Expansin-like A3 OS=Oryza sativa subsp. japonica GN=EXLA3 PE=2 SV=1

 Score =  196 bits (497), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/247 (43%), Positives = 147/247 (59%), Gaps = 8/247 (3%)

Query: 15  ATACDHCVHQSKVSYFSKTSALSKGACGYG-----SLALGLGSGHIAAAVPSIYKNGAAC 69
           A+AC+ CV   K +Y    S L  G  G       ++ + L  G +AA  P  ++ G  C
Sbjct: 26  ASACERCVRNGKAAYSPSLSPLPPGGGGGCGYGAMAMEMELNGGFLAAGGPRQHRGGLGC 85

Query: 70  GGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAV 129
           G  CFQ+RC+N  +CS  G RV++TD + +N TD +L   AF  LA  GM +++ K  A+
Sbjct: 86  G-RCFQMRCRNAEVCSNAGVRVVLTDFHRSNSTDFLLGGPAFAGLAKPGMAHKLKKLDAL 144

Query: 130 DVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMR 189
            VEY R+PC+YK  NL++ VEE SK PN L IK LYQGG+T+IL V +++ GS     M 
Sbjct: 145 SVEYRRIPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMT 204

Query: 190 RKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPV-PADWKIGVTYDAGVQITDVDF 248
           R +G VW  DRAP GPLQF   +  G+D KW+WA   V PA+W+ G  YD G +I DV  
Sbjct: 205 RVYGPVWSIDRAPNGPLQFRAVVTGGYDGKWVWADREVLPANWQPGQVYDTGARIADV-A 263

Query: 249 TDGCAEC 255
            + C +C
Sbjct: 264 RESCLDC 270

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5Z980|EXLA4_ORYSJ Expansin-like A4 OS=Oryza sativa subsp. japonica GN=EXLA4 PE=2 SV=1

 Score =  164 bits (415), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 152/263 (57%), Gaps = 33/263 (12%)

Query: 13  SSATACDHCV-HQSKVSYF---SKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAA 68
           ++A +CD C    S VS     +  + L+ GACG+G+  + L   ++AA    ++++G A
Sbjct: 30  AAAHSCDWCTPRHSTVSILPTPTHAAHLTGGACGFGAAPMEL---NVAAVTADLFRHGHA 86

Query: 69  CGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRA------------FRALAN 116
           CG  C+Q+RC++R LC   G +V+V D+    + +  ++R A            F A+A 
Sbjct: 87  CGA-CYQLRCRDRRLCGEDGVKVVVADMAKQPEQEGEMNRTAGGSLQFRITEDAFAAMAK 145

Query: 117 KGMD-NEILKQRAVDVEYIRVPCEYKH-HNLAVRVEESSKNPNYLAIKVLYQGGKTEILG 174
           +G+  +E+ +QR ++V++ R+PCEY+    LAVRVEE+S+NP +LAI+ LYQGG+T+I  
Sbjct: 146 QGVSAHELTRQRTLEVDFRRIPCEYRESRRLAVRVEEASRNPTHLAIRFLYQGGQTDIAA 205

Query: 175 VVLSEYGSPVRID--------MRRKFGA--VWETDRAPKGPLQFGFPIVQGFDVKWIWAK 224
           V +++  +             M R+ GA  VW T RAP GPL+    +  G   KW+ + 
Sbjct: 206 VEIAQANATPPSSSYYSSWRYMTRRDGAPGVWTTSRAPVGPLRLRVVVTAGSGGKWLRSD 265

Query: 225 NPV-PADWKIGVTYDAGVQITDV 246
             V PADW+ G  YD G+++TDV
Sbjct: 266 GEVLPADWRPGEVYDTGLRVTDV 288

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O23547|EXLB1_ARATH Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2

 Score =  162 bits (410), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 130/246 (52%), Gaps = 4/246 (1%)

Query: 1   MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTS--ALSKGACGYGSLALGLGSGHIAAA 58
           + +L   +  LL      D  V+ S+ +Y+      A  +G CGYG     + +G ++  
Sbjct: 7   LLLLFVQVIVLLPLLCLSDDFVN-SRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGV 65

Query: 59  VPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKG 118
              ++ NG  CG  C+QVRCK    CS +G  V+ TD    + TD +LS +A+  +A  G
Sbjct: 66  SWRLWNNGTGCG-ACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPG 124

Query: 119 MDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLS 178
            +N++     V+VEY R+PC Y  +NL  ++ E S NP+YLAI VLY GG  +IL V + 
Sbjct: 125 TENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVW 184

Query: 179 EYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYD 238
           +        MRR FGAV +    P+G L   F +     + WI + N +PADW  G TYD
Sbjct: 185 QEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYD 244

Query: 239 AGVQIT 244
           + + +T
Sbjct: 245 SNILLT 250

Arabidopsis thaliana (taxid: 3702)

>sp|Q850K7|EXLB1_ORYSJ Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2

 Score =  148 bits (373), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 131/250 (52%), Gaps = 12/250 (4%)

Query: 1   MAILLCFLFFLLSSATACDHCVHQSKVSYF--SKTSALSKGACGYGSLALGLGSGHIAAA 58
           + ++L  + FL S ATA D     S+ +Y+  S       GAC YG+    L +G ++A+
Sbjct: 9   LPVILSLILFL-SKATA-DANFTVSRAAYYPNSDIKGTENGACEYGAFGATLNNGDVSAS 66

Query: 59  VPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALA-NK 117
             S+Y++G  CG  C+QVRC N   CS  G  +++TD   ++ TD +LS+ AF  +A + 
Sbjct: 67  A-SLYRDGVGCGA-CYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQST 124

Query: 118 GMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVL 177
                +L    V +EY RV C Y + N+  ++ ESS  PNYL  ++ YQ G  +I+ V L
Sbjct: 125 DAGTALLTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQL 184

Query: 178 SEYGSPVRIDMRRKFGAVWETDRAPKGPLQ----FGFPIVQGFDVKWIWAKNPVPADWKI 233
            E  +     + R  GAVW     P GPL     F     +G D  W+   N VP +W  
Sbjct: 185 CETVNLTCQLLSRTHGAVWAAVSPPSGPLSIRMLFSSGAPRGGDT-WLVPTNIVPQNWTA 243

Query: 234 GVTYDAGVQI 243
           G TYD+GVQ+
Sbjct: 244 GATYDSGVQV 253

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XT40|EXB15_ORYSJ Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2

 Score =  108 bits (269), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 115/220 (52%), Gaps = 21/220 (9%)

Query: 39  GACGY-GSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTD-- 95
           GACGY G++     S  IAA  PSIYK+G  CG +C+QV+C   + CS     V++TD  
Sbjct: 56  GACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCG-SCYQVKCTGNSACSGNPVTVVLTDEC 114

Query: 96  -----LNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVE 150
                L+     D  LS  AF A+AN G  +++     + ++Y RVPC +    L   V+
Sbjct: 115 PGGPCLSEPVHFD--LSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVKLTFVVD 172

Query: 151 ESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVR-IDMRRKFGAVWETDRAPKGPLQFG 209
             S NPNY A+ V Y+ G  ++ GV L + G+      M++ +GAVW+ +      LQ  
Sbjct: 173 VGS-NPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSA--LQAP 229

Query: 210 FPI-VQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDF 248
           F I +     K + A N +P+ WK G++Y     I+ V+F
Sbjct: 230 FSIRLTSSSGKTLVASNVIPSGWKPGMSY-----ISTVNF 264

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	259
224105087	259	hypothetical protein POPTRDRAFT_832983 [	0.980	0.980	0.656	2e-95
224078466	259	hypothetical protein POPTRDRAFT_713415 [	0.988	0.988	0.646	1e-92
225428199	259	PREDICTED: expansin-like A2 [Vitis vinif	0.945	0.945	0.646	5e-90
147866207	259	hypothetical protein VITISV_025068 [Viti	0.945	0.945	0.642	5e-89
255587002	259	Beta-expansin 1a precursor, putative [Ri	0.976	0.976	0.631	1e-86
388506836	260	unknown [Medicago truncatula]	0.942	0.938	0.621	6e-86
217071872	260	unknown [Medicago truncatula]	0.930	0.926	0.625	3e-85
388252785	259	expansin-like 1 [Ziziphus jujuba]	0.988	0.988	0.584	2e-84
356543973	261	PREDICTED: expansin-like A1-like [Glycin	0.934	0.927	0.617	1e-83
33111959	265	expansin-like protein [Quercus robur]	0.934	0.913	0.610	8e-82

>gi|224105087|ref|XP_002313682.1| hypothetical protein POPTRDRAFT_832983 [Populus trichocarpa] gi|222850090|gb|EEE87637.1| hypothetical protein POPTRDRAFT_832983 [Populus trichocarpa]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/256 (65%), Positives = 203/256 (79%), Gaps = 2/256 (0%)

Query: 1   MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVP 60
           MA+ LCFLF ++SSAT CD CVHQSKV+YFSK SALS GACGYGS+A+G  SGH+AAAV 
Sbjct: 1   MAVFLCFLFLIISSATGCDRCVHQSKVAYFSKASALSTGACGYGSMAIGFNSGHLAAAVS 60

Query: 61  SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMD 120
           S+YK+GA CG  CFQ+RCKN ALCS +GT VIVTDLN+NN+TD VLS RAF A+ANKGM 
Sbjct: 61  SLYKDGAGCG-ACFQIRCKNTALCSSRGTTVIVTDLNNNNQTDFVLSSRAFMAMANKGMG 119

Query: 121 NEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEY 180
            ++LK   +DVEY RVPCEYK+ NLAVRVEESSK PNYLAIK+LYQGG+TE++ + +++ 
Sbjct: 120 QDVLKHGILDVEYKRVPCEYKNQNLAVRVEESSKKPNYLAIKLLYQGGQTEVVAMDVAKV 179

Query: 181 GSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG 240
           GS     M R  GAVW+TDR P G LQF F +  GFD KWIWA+  +P DWK G+TYD+G
Sbjct: 180 GSSNWGFMSRNHGAVWDTDRVPAGALQFRFVVTAGFDGKWIWAQKVLPEDWKPGMTYDSG 239

Query: 241 VQITDVDFTDGCAECG 256
           VQITD+   +GC+ CG
Sbjct: 240 VQITDIA-QEGCSPCG 254

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078466|ref|XP_002305545.1| hypothetical protein POPTRDRAFT_713415 [Populus trichocarpa] gi|118483011|gb|ABK93417.1| unknown [Populus trichocarpa] gi|222848509|gb|EEE86056.1| hypothetical protein POPTRDRAFT_713415 [Populus trichocarpa]

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 168/260 (64%), Positives = 200/260 (76%), Gaps = 4/260 (1%)

Query: 1   MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVP 60
           MAI +CFLF  +S ATACD CVHQSKV+YFS+ SALS GACGYGS+A G  SGH+AAAV 
Sbjct: 1   MAIFICFLFLAISYATACDRCVHQSKVAYFSRDSALSSGACGYGSMATGFNSGHLAAAVS 60

Query: 61  SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMD 120
           S+YK+G+ CG  CFQ+RCK+  LCSR+GTRVIVTDLN NN+TD VLS RAF A+ANK   
Sbjct: 61  SLYKDGSGCGA-CFQIRCKDTTLCSREGTRVIVTDLNRNNQTDFVLSSRAFMAMANKDKG 119

Query: 121 NEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEY 180
             ILKQ  V+VEY RVPCEYK+ NLAVRVEESSKN NYLAIK+LYQGG+TE++ +  ++ 
Sbjct: 120 RNILKQGIVEVEYKRVPCEYKNQNLAVRVEESSKNSNYLAIKLLYQGGQTEVVAIDFAKV 179

Query: 181 GSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG 240
           GS     M R  GAVW++DR P G LQF F I  GFD KWIWA+N +P DWK G+TYD+G
Sbjct: 180 GSSNWGFMSRNHGAVWDSDRVPSGALQFRFVITAGFDGKWIWARNVLPEDWKPGMTYDSG 239

Query: 241 VQITDVDFTDGCAEC--GPW 258
           VQITD+   +GC+ C  G W
Sbjct: 240 VQITDIA-QEGCSPCDDGIW 258

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428199|ref|XP_002281851.1| PREDICTED: expansin-like A2 [Vitis vinifera] gi|297744518|emb|CBI37780.3| unnamed protein product [Vitis vinifera]

 Score =  336 bits (862), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 159/246 (64%), Positives = 190/246 (77%), Gaps = 1/246 (0%)

Query: 1   MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVP 60
           MAI LCFLFFL+SSATACD CVH +KV+YFSK SALS GACGYGSLALG   GH+AA VP
Sbjct: 1   MAIFLCFLFFLISSATACDRCVHHTKVAYFSKASALSSGACGYGSLALGFYGGHLAAGVP 60

Query: 61  SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMD 120
           S++K+GA CG  CFQ+RCKN  LCSR GT VI+TDLN NN+TD VLS RAF A+ANKGM 
Sbjct: 61  SLFKDGAGCGA-CFQIRCKNTTLCSRAGTTVILTDLNRNNQTDFVLSSRAFTAMANKGMG 119

Query: 121 NEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEY 180
            +ILK   VDVEY RV C Y   NLA+RVEE S+ P+YLAIKVLYQGG+TEI+G+ +++ 
Sbjct: 120 QQILKLGLVDVEYKRVLCNYNKQNLAIRVEEMSQKPHYLAIKVLYQGGQTEIVGMDVAQV 179

Query: 181 GSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG 240
            S     M R +GA+W+T   P GPLQ  F +  G+D KW+WAK  +PADWK+G TYDAG
Sbjct: 180 DSSRWTYMTRNYGAIWDTSNVPSGPLQLRFVVTGGYDGKWVWAKKVLPADWKVGETYDAG 239

Query: 241 VQITDV 246
           VQI+D+
Sbjct: 240 VQISDI 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866207|emb|CAN79420.1| hypothetical protein VITISV_025068 [Vitis vinifera]

 Score =  333 bits (854), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 158/246 (64%), Positives = 189/246 (76%), Gaps = 1/246 (0%)

Query: 1   MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVP 60
           MAI LCFLFFL+SSATACD CVH +KV+YFSK SALS GACGYGSLALG   GH+AA V 
Sbjct: 1   MAIFLCFLFFLISSATACDRCVHHTKVAYFSKASALSSGACGYGSLALGFYGGHLAAGVX 60

Query: 61  SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMD 120
           S++K+GA CG  CFQ+RCKN  LCSR GT VI+TDLN NN+TD VLS RAF A+ANKGM 
Sbjct: 61  SLFKDGAGCGA-CFQIRCKNTTLCSRAGTTVILTDLNRNNQTDFVLSSRAFTAMANKGMG 119

Query: 121 NEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEY 180
            +ILK   VDVEY RV C Y   NLA+RVEE S+ P+YLAIKVLYQGG+TEI+G+ +++ 
Sbjct: 120 QQILKLGLVDVEYKRVLCNYNKQNLAIRVEEMSQKPHYLAIKVLYQGGQTEIVGMDVAQV 179

Query: 181 GSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG 240
            S     M R +GA+W+T   P GPLQ  F +  G+D KW+WAK  +PADWK+G TYDAG
Sbjct: 180 DSSRWTYMTRNYGAIWDTSNVPSGPLQLRFVVTGGYDGKWVWAKKVLPADWKVGETYDAG 239

Query: 241 VQITDV 246
           VQI+D+
Sbjct: 240 VQISDI 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587002|ref|XP_002534094.1| Beta-expansin 1a precursor, putative [Ricinus communis] gi|223525857|gb|EEF28288.1| Beta-expansin 1a precursor, putative [Ricinus communis]

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 161/255 (63%), Positives = 198/255 (77%), Gaps = 2/255 (0%)

Query: 1   MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVP 60
           MA+ L FLFFL+SSATACD C HQSK +YFSK S LS GACGYGS A+G  SGH+AA VP
Sbjct: 1   MAVFLFFLFFLISSATACDRCPHQSKAAYFSKASQLSSGACGYGSSAIGFNSGHLAAGVP 60

Query: 61  SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMD 120
           +++K GA CG  CFQ+RC+N+ +CS KGT VI+TDLNHNN+TD VLS RAF A+ANKGM 
Sbjct: 61  TLFKGGAGCG-ACFQIRCRNKTMCSSKGTTVILTDLNHNNQTDFVLSSRAFMAMANKGMG 119

Query: 121 NEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEY 180
            +IL+   VD+EY RVPC YK+ NLAVRVEESS+ PNYLAIKVLYQGG+TEI+ + +++ 
Sbjct: 120 QDILRLGIVDIEYKRVPCVYKNQNLAVRVEESSQKPNYLAIKVLYQGGQTEIVAMDVAQV 179

Query: 181 GSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG 240
           GS     M R +GAVW+T R P G LQF F +  G+D KWIWAK+ +PADWK GV YD+G
Sbjct: 180 GSSNWSYMSRNYGAVWDTSRVPGGALQFRFVVTAGYDGKWIWAKSVLPADWKPGVVYDSG 239

Query: 241 VQITDVDFTDGCAEC 255
           VQI+D+   +GC+ C
Sbjct: 240 VQISDIA-QEGCSPC 253

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506836|gb|AFK41484.1| unknown [Medicago truncatula]

 Score =  323 bits (827), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 153/246 (62%), Positives = 188/246 (76%), Gaps = 2/246 (0%)

Query: 10  FLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAAC 69
            L SSATACD C+HQSK SYFSK SALS GACGYGSLAL    GH+AA V S++ NGA C
Sbjct: 11  ILASSATACDRCLHQSKASYFSKASALSSGACGYGSLALDFSGGHLAAGVSSLFYNGAGC 70

Query: 70  GGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAV 129
           G  CFQVRCKN+A+C+++GT+V++TDLNHNN+TD VLS RAF A+A KGM  +ILK   V
Sbjct: 71  GA-CFQVRCKNQAICTKEGTKVVLTDLNHNNQTDFVLSSRAFTAMAQKGMSQQILKLGIV 129

Query: 130 DVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMR 189
           D+EY RVPCEYK  NLAVRVEESSK P+YLAIK LYQGG+TEI+GV +++ GS     + 
Sbjct: 130 DIEYKRVPCEYKKQNLAVRVEESSKKPDYLAIKFLYQGGQTEIVGVDVAQVGSSNWSFLS 189

Query: 190 RKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFT 249
           R  GAVW+T R P+G LQF   +  G+D KW+WAK  +PADWK GV YD+ +QIT++   
Sbjct: 190 RNHGAVWDTSRVPQGALQFRIVVTSGYDGKWLWAKKVLPADWKNGVIYDSDIQITEIA-Q 248

Query: 250 DGCAEC 255
           +GC+ C
Sbjct: 249 EGCSPC 254

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071872|gb|ACJ84296.1| unknown [Medicago truncatula]

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 152/243 (62%), Positives = 187/243 (76%), Gaps = 2/243 (0%)

Query: 13  SSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGT 72
           SSATACD C+HQSK SYFSK SALS GACGYGSLAL    GH+AA V S++ NGA CG  
Sbjct: 14  SSATACDRCLHQSKASYFSKASALSSGACGYGSLALDFSGGHLAAGVSSLFYNGAGCGA- 72

Query: 73  CFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVE 132
           CFQVRCKN+A+C+++GT+V++TDLNHNN+TD VLS RAF A+A KGM  +ILK   VD+E
Sbjct: 73  CFQVRCKNQAICTKEGTKVVLTDLNHNNQTDFVLSSRAFTAMAQKGMSQQILKLGIVDIE 132

Query: 133 YIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKF 192
           Y RVPCEYK  NLAVRVEESSK P+YLAIK LYQGG+TEI+GV +++ GS     + R  
Sbjct: 133 YKRVPCEYKKQNLAVRVEESSKKPDYLAIKFLYQGGQTEIVGVDVAQVGSSNWSFLSRNH 192

Query: 193 GAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGC 252
           GAVW+T R P+G LQF   +  G+D KW+WAK  +PADWK GV YD+ +QIT++   +GC
Sbjct: 193 GAVWDTSRVPQGALQFRIVVTSGYDGKWLWAKKVLPADWKNGVIYDSDIQITEIA-QEGC 251

Query: 253 AEC 255
           + C
Sbjct: 252 SPC 254

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388252785|gb|AFK24456.1| expansin-like 1 [Ziziphus jujuba]

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 152/260 (58%), Positives = 193/260 (74%), Gaps = 4/260 (1%)

Query: 1   MAILLCFLFFLLSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVP 60
           MA+L   LFFL+SS TACD CVHQ+K +YFSK SALS GACGYGSLALG    H+AA VP
Sbjct: 1   MALLFSILFFLISSVTACDRCVHQTKTAYFSKASALSSGACGYGSLALGFSGEHVAAGVP 60

Query: 61  SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMD 120
           +++K+GA CG  CFQ+RCK+ ALCS++GTRVI+TDLN +N+TD VLS RAF A+A KG+D
Sbjct: 61  TLFKDGAGCG-ACFQIRCKDTALCSKEGTRVILTDLNQHNQTDFVLSSRAFTAMAQKGLD 119

Query: 121 NEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEY 180
            +ILK+  VDV         +  NL+VRVEESS+ PNYL+IK+LYQGG+TE++G+ ++E 
Sbjct: 120 QDILKRGIVDVNTRGFLVNTRKKNLSVRVEESSQKPNYLSIKLLYQGGQTEVVGIDVAEV 179

Query: 181 GSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG 240
           GS     M R  GAVW+T R P G LQF F +  G+D KWIWAK+ +PA WK+GV YD+G
Sbjct: 180 GSSNWSFMSRNHGAVWDTSRVPAGALQFRFIVTSGYDGKWIWAKSVLPAGWKVGVIYDSG 239

Query: 241 VQITDVDFTDGCAEC--GPW 258
           VQI D+   +GC+ C  G W
Sbjct: 240 VQINDIA-QEGCSPCDTGSW 258

Source: Ziziphus jujuba

Species: Ziziphus jujuba

Genus: Ziziphus

Family: Rhamnaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543973|ref|XP_003540432.1| PREDICTED: expansin-like A1-like [Glycine max]

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 152/246 (61%), Positives = 184/246 (74%), Gaps = 4/246 (1%)

Query: 16  TACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQ 75
           TACD C+HQSK SYFSK SALS GACGYGSLAL +  GH+AA V S++K+GA CG  CFQ
Sbjct: 18  TACDRCLHQSKASYFSKASALSSGACGYGSLALDISGGHLAAGVASLFKDGAVCG-ACFQ 76

Query: 76  VRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIR 135
           +RCKN  LCS++GTRV++TDLNHNN+TD VLS RAF  +A KGM  +ILK    D+EY R
Sbjct: 77  IRCKNPTLCSKEGTRVVLTDLNHNNQTDFVLSSRAFAGMAQKGMGKQILKLGIADIEYKR 136

Query: 136 VPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAV 195
           VPCEYK  NLAVRVEESSK P YLAIK LYQGG+TEI+ V +++ GS     M R  GAV
Sbjct: 137 VPCEYKKQNLAVRVEESSKKPEYLAIKFLYQGGQTEIVAVDVAQVGSSNWSFMSRSDGAV 196

Query: 196 WETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDGCAEC 255
           W+T R P+G LQF   +  G+D KWIWAK  +PADWK G+ YD+G+QITD+   +GC+ C
Sbjct: 197 WDTSRVPQGALQFRLVVTAGYDGKWIWAKKVLPADWKNGLIYDSGLQITDI-AQEGCSPC 255

Query: 256 --GPWN 259
             G W+
Sbjct: 256 DDGTWS 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|33111959|emb|CAE12163.1| expansin-like protein [Quercus robur]

 Score =  309 bits (791), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 149/244 (61%), Positives = 186/244 (76%), Gaps = 2/244 (0%)

Query: 12  LSSATACDHCVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGG 71
           +S++TACD CVH++KV+YFSK SALS GACGYGSLALG  SGH+AA V S+YK+GA CG 
Sbjct: 18  ISTSTACDRCVHKAKVAYFSKASALSSGACGYGSLALGFNSGHLAAGVASLYKDGAGCG- 76

Query: 72  TCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDV 131
            CFQVRCKN + C+++GT V VTDLN NN+TD V+S RAF A+A KGM  +ILK   VDV
Sbjct: 77  ACFQVRCKNTSHCTKEGTIVTVTDLNRNNQTDFVVSSRAFMAMAQKGMGQDILKLGIVDV 136

Query: 132 EYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRK 191
           EY RVPC+YK+ NLAVRVEE S+ PNYLA+K LYQG +TEI+GV +++ GS     M   
Sbjct: 137 EYKRVPCQYKNQNLAVRVEEPSQKPNYLAVKFLYQGSQTEIVGVDVAQVGSSNWGFMSHN 196

Query: 192 FGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTDG 251
           +GAVW+T R P G LQF   I  G+D K+IWA++ +PADWK GV YD+GVQ TD+   +G
Sbjct: 197 YGAVWDTSRVPSGALQFRIVITAGYDGKYIWAQHVLPADWKSGVIYDSGVQFTDI-AQEG 255

Query: 252 CAEC 255
           C+ C
Sbjct: 256 CSPC 259

Source: Quercus robur

Species: Quercus robur

Genus: Quercus

Family: Fagaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	259
TAIR|locus:2121803	265	EXLA2 "expansin-like A2" [Arab	0.945	0.924	0.529	1.2e-67
TAIR|locus:2077167	263	EXLA3 "expansin-like A3" [Arab	0.945	0.931	0.544	1.9e-67
TAIR|locus:2077177	265	EXLA1 "expansin-like A1" [Arab	0.945	0.924	0.511	3.2e-65
TAIR|locus:2130444	250	EXLB1 "expansin-like B1" [Arab	0.702	0.728	0.398	8.3e-35
TAIR|locus:2018521	273	EXPB2 "expansin B2" [Arabidops	0.687	0.652	0.308	5.1e-19
TAIR|locus:4515102723	223	EXPB6 "AT1G65681" [Arabidopsis	0.667	0.775	0.308	2e-17
TAIR|locus:2123643	264	EXPB3 "expansin B3" [Arabidops	0.706	0.693	0.293	2e-17
TAIR|locus:2055594	259	EXPB4 "expansin B4" [Arabidops	0.667	0.667	0.313	5.3e-17
TAIR|locus:2051338	271	EXPB1 "expansin B1" [Arabidops	0.706	0.675	0.273	2.3e-16
TAIR|locus:2157215	262	EXPA21 "expansin A21" [Arabido	0.652	0.645	0.261	2.1e-05

TAIR|locus:2121803 EXLA2 "expansin-like A2" [Arabidopsis thaliana (taxid:3702)]

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 133/251 (52%), Positives = 167/251 (66%)

Query:    13 SSATACDHCVHQSKVSYFSKTSALSKXXXXXXXXXXXXXXXXXXXXVPSIYKNGAACGGT 72
             SSA ACD C+H SK +YFS  SALS                     +PSIYK+G+ CG  
Sbjct:    17 SSAAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGA- 75

Query:    73 CFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANK--GMDNEILKQRAVD 130
             CFQVRCKN  LCS KGT VIVTDLN  N+TD+VLS RAFRA+A    G D ++LKQ  VD
Sbjct:    76 CFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVD 135

Query:   131 VEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRR 190
             +EY RVPC+Y +  + VRVEESSKNPNYLAIK+LYQGG+TE++ + +++ GS     M R
Sbjct:   136 IEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTR 195

Query:   191 KFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTD 250
               GAVW TD+ P G LQF F +  G+D K +W++  +PA+W+ G +YDAGVQITD+   +
Sbjct:   196 SHGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDAGVQITDIA-QE 254

Query:   251 GCAECGP--WN 259
             GC  C    WN
Sbjct:   255 GCDPCDDHIWN 265

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

TAIR|locus:2077167 EXLA3 "expansin-like A3" [Arabidopsis thaliana (taxid:3702)]

 Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
 Identities = 136/250 (54%), Positives = 165/250 (66%)

Query:    13 SSATACDHCVHQSKVSYFSKTSALSKXXXXXXXXXXXXXXXXXXXXVPSIYKNGAACGGT 72
             SS  ACD C+H+SK SYFS  SALS                     +PSIYK+GA CG  
Sbjct:    16 SSVNACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGA- 74

Query:    73 CFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANK--GMDNEILKQRAVD 130
             CFQVRCKN  LC+ KGT V+VTDLN +N+TD+VLS RAFRA+A    G+D  +LKQ  VD
Sbjct:    75 CFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVD 134

Query:   131 VEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRR 190
             VEY RVPC Y   NL VRVEE+SK PNYLAIK+LYQGG+TE++G+ ++  GS     M R
Sbjct:   135 VEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSR 194

Query:   191 KFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFTD 250
               GAVW TD+ P G LQF F +  G+D K +W+K  +PA+W  G  YDAGVQITD+   +
Sbjct:   195 SHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGVQITDIA-QE 253

Query:   251 GCAECGP-WN 259
             GC  CG  WN
Sbjct:   254 GCDTCGHIWN 263

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2077177 EXLA1 "expansin-like A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
 Identities = 129/252 (51%), Positives = 168/252 (66%)

Query:    13 SSATACDHCVHQSKVSYFSKTSALSKXXXXXXXXXXXXXXXXXXXXVPSIYKNGAACGGT 72
             SS  ACD C+H+SK +YFS  SALS                     +PSIYK+GA CG  
Sbjct:    16 SSVNACDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGA- 74

Query:    73 CFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANK--GMDNEILKQRAVD 130
             CFQVRCKN  LCS KGT V++TDLN +N+TD+VLS RAFRA+A    G D ++LKQ  VD
Sbjct:    75 CFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVD 134

Query:   131 VEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGS-PVRIDMR 189
             +EY RVPC+Y + N+ VRVEE+SK PNYL IK+LYQGG+TE++ + +++ GS P    M 
Sbjct:   135 IEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMT 194

Query:   190 RKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQITDVDFT 249
             R  GAVW TD+ P G +QF F +  G+D K IW+++ +P++W+ G  YDAGVQITD+   
Sbjct:   195 RSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYDAGVQITDIA-Q 253

Query:   250 DGCAECGP--WN 259
             +GC  C    WN
Sbjct:   254 EGCDPCDAHIWN 265

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2130444 EXLB1 "expansin-like B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 73/183 (39%), Positives = 104/183 (56%)

Query:    62 IYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDN 121
             ++ NG  CG  C+QVRCK    CS +G  V+ TD    + TD +LS +A+  +A  G +N
Sbjct:    69 LWNNGTGCGA-CYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTEN 127

Query:   122 EILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYG 181
             ++     V+VEY R+PC Y  +NL  ++ E S NP+YLAI VLY GG  +IL V + +  
Sbjct:   128 QLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQED 187

Query:   182 SPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGV 241
                   MRR FGAV +    P+G L   F +     + WI + N +PADW  G TYD+ +
Sbjct:   188 CKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYDSNI 247

Query:   242 QIT 244
              +T
Sbjct:   248 LLT 250

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS

GO:0009828 "plant-type cell wall loosening" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2018521 EXPB2 "expansin B2" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 58/188 (30%), Positives = 97/188 (51%)

Query:    60 PSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMV---LSRRAFRALAN 116
             PS++K+G  CG  C+QV+C +++ CS+    V++TD       + V   LS  AF A+A 
Sbjct:    88 PSLFKSGKGCGA-CYQVKCTSKSACSKNPVTVVITDECPGCVKESVHFDLSGTAFGAMAI 146

Query:   117 KGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVV 176
              G D+++     + + Y +V C Y    +  +V++ S N N  A+ V Y  G  EI  + 
Sbjct:   147 SGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGS-NANSFAVLVAYVNGDGEIGRIE 205

Query:   177 LSE-YGSPVRIDMRRKFGAVWETD-RAP-KGPLQFGFPIVQGFDVKWIWAKNPVPADWKI 233
             L +   S   + M + +GAVW+ D  +P + PL      ++    K + A N +PA+W+ 
Sbjct:   206 LKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESG--KTVVASNVIPANWQP 263

Query:   234 GVTYDAGV 241
             G  Y + V
Sbjct:   264 GAIYKSNV 271

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:4515102723 EXPB6 "AT1G65681" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 57/185 (30%), Positives = 87/185 (47%)

Query:    60 PSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNH-----NNKTDMVLSRRAFRAL 114
             PS++ NG  CG TCFQ+ C     CSR+   V +TD        +      LS +A  AL
Sbjct:    37 PSVFNNGIGCG-TCFQILCNGHPACSRRPITVTITDECPGGPCASEPAHFDLSGKAMGAL 95

Query:   115 ANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILG 174
             A  G  + +     + V Y RV C Y+  N+A R++  + NP Y++  V Y+ G  ++  
Sbjct:    96 ARPGQGDRLRSAGVLRVYYRRVECLYRRTNIAFRMDPGA-NPYYISFVVEYENGDGDLAY 154

Query:   175 VVLSEYGSPVRIDMRRKFGAVWE-TDRAP-KGPLQFGFPIVQGFDVKWIWAKNPVPADWK 232
             + +        I M+    AVW+ +  +P  GP  F   +      K + A N +PA+WK
Sbjct:   155 IEIQPADGEF-IPMQEMRSAVWKISSGSPLTGP--FNIRLTSAESHKVVLAYNVIPANWK 211

Query:   233 IGVTY 237
                TY
Sbjct:   212 PNETY 216

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2123643 EXPB3 "expansin B3" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 56/191 (29%), Positives = 95/191 (49%)

Query:    60 PSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLN---HNNKTDMVLSRRAFRALAN 116
             P ++KNG  CG  C++VRC ++++CSR+   VI+TD         T   LS   F  LA 
Sbjct:    77 PILFKNGEGCGA-CYKVRCLDKSICSRRAVTVIITDECPGCSKTSTHFDLSGAVFGRLAI 135

Query:   117 KGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVV 176
              G    +  +  + V Y R  C+Y+  N+A  V E S +  +L++ V ++ G+ +I  + 
Sbjct:   136 AGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTD-FWLSLLVEFEDGEGDIGSMH 194

Query:   177 LSEYGSPVRIDMRRKFGAVWETDRAP-KGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGV 235
             + + G+   ++M+  +GA W     P KGP  F   +      K + A + VP +W    
Sbjct:   195 IRQAGAREWLEMKHVWGANWCIIGGPLKGP--FSIKLTTLSAGKTLSATDVVPRNWAPKA 252

Query:   236 TYDAGVQITDV 246
             TY + +  + V
Sbjct:   253 TYSSRLNFSPV 263

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0019953 "sexual reproduction" evidence=IEA

GO:0006949 "syncytium formation" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2055594 EXPB4 "expansin B4" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 58/185 (31%), Positives = 88/185 (47%)

Query:    60 PSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNK--TDMV---LSRRAFRAL 114
             PS++ NG  CG TC+QV C     CS     V +TD        ++ V   LS +A  AL
Sbjct:    74 PSLFNNGKGCG-TCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGAL 132

Query:   115 ANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILG 174
             A  G  +++     + V Y R  C Y+  N+  R++  + NP Y++  V Y+ G  ++  
Sbjct:   133 AKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGA-NPYYISFVVEYENGDGDLSN 191

Query:   175 VVLSEYGSPVRIDMRRKFGAVWETDR--APKGPLQFGFPIVQGFDVKWIWAKNPVPADWK 232
             V +   G    I M+    AVW+ +   A +GP  F   +  G   K I A N +PA+WK
Sbjct:   192 VEIQPAGGSF-ISMQEMRSAVWKVNSGSALRGP--FNIRLTSGESHKVIVAYNVIPANWK 248

Query:   233 IGVTY 237
                +Y
Sbjct:   249 PDESY 253

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2051338 EXPB1 "expansin B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 53/194 (27%), Positives = 97/194 (50%)

Query:    60 PSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNK------TDMVLSRRAFRA 113
             P ++K G  CG  C++VRC ++ +CS++   +I TD + +        T   LS  AF  
Sbjct:    81 PILFKGGEGCGA-CYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGH 139

Query:   114 LANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEIL 173
             +A  G +  I  +  +++ Y R  C+Y+  N+A  V   S +  +L++ + Y+ G+ +I 
Sbjct:   140 MAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTD-YWLSLLIEYEDGEGDIG 198

Query:   174 GVVLSEYGSPVRIDMRRKFGAVWETDRAP-KGPLQFGFPIVQGFDVKWIWAKNPVPADWK 232
              + + + GS   I M+  +GA W     P KGP  F   +    + K + A + +P++W 
Sbjct:   199 SMHIRQAGSKEWISMKHIWGANWCIVEGPLKGP--FSVKLTTLSNNKTLSATDVIPSNWV 256

Query:   233 IGVTYDAGVQITDV 246
                TY + +  + V
Sbjct:   257 PKATYTSRLNFSPV 270

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2157215 EXPA21 "expansin A21" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 47/180 (26%), Positives = 73/180 (40%)

Query:    61 SIYKNGAACGGTCFQVRCK-NRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGM 119
             +++ +GA+CG  C+++ C  N   C     ++  TDL         L  + F       +
Sbjct:    87 ALFNSGASCGA-CYEIMCSPNPQGCLSGSIKITATDLCPPGSAWCYLPNKHFDLSLPMFI 145

Query:   120 DNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSE 179
                 +K + V V Y RVPC        V+ E    NPN L I     GG  +I+ V  S 
Sbjct:   146 KIAQVKAKMVPVRYRRVPCAKTG---GVKFEVKG-NPNILTILPYNVGGAGDIIAV--SA 199

Query:   180 YGSPVR-IDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYD 238
              GS    + M R +G  W T+    G       +     +   +  + +PA W  G T+D
Sbjct:   200 KGSKTAWVVMSRYWGQNWTTNVNLTGQ-SVSLRVTTSDGITKDFT-DVMPASWGFGQTFD 257

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LZT5	EXLA3_ARATH	No assigned EC number	0.5791	0.9806	0.9657	yes	no
Q10S70	EXLA1_ORYSJ	No assigned EC number	0.4691	0.9227	0.8566	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	259
PLN03023	247	PLN03023, PLN03023, Expansin-like B1; Provisional	5e-66
pfam01357	82	pfam01357, Pollen_allerg_1, Pollen allergen	4e-15
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	2e-11
PLN00050	247	PLN00050, PLN00050, expansin A; Provisional	2e-06
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	1e-05

>gnl|CDD|215542 PLN03023, PLN03023, Expansin-like B1; Provisional

 Score =  205 bits (522), Expect = 5e-66
 Identities = 96/244 (39%), Positives = 133/244 (54%), Gaps = 7/244 (2%)

Query: 5   LCFLFF--LLSSATACDHCVHQSKVSYFSKTSALS--KGACGYGSLALGLGSGHIAAAVP 60
            CFL    LL          + S+ +Y+     L    GACG+G     +  G++A  V 
Sbjct: 7   CCFLCVIVLLPLLCKSQDFTY-SRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAG-VS 64

Query: 61  SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMD 120
            +Y+NG  CG  C+QVRCK   LCS  G  V+VTD    +KTD +LS RA+  LA   M 
Sbjct: 65  RLYRNGTGCGA-CYQVRCKAPNLCSDDGVNVVVTDYGEGDKTDFILSPRAYARLARPNMA 123

Query: 121 NEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEY 180
            E+     VDVEY R+PC Y  +NL  +V E S+ P+YLAI +LYQ G+ +IL V + + 
Sbjct: 124 AELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLAIVMLYQAGQNDILAVEIWQE 183

Query: 181 GSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG 240
                  MR+ +GAVW+    PKGP+   F +       W+ AKN +P+DWK GV YD+ 
Sbjct: 184 DCKEWRGMRKAYGAVWDMPNPPKGPITLRFQVSGSAGQTWVQAKNVIPSDWKAGVAYDSN 243

Query: 241 VQIT 244
           +Q+ 
Sbjct: 244 IQLD 247

Length = 247

>gnl|CDD|216453 pfam01357, Pollen_allerg_1, Pollen allergen

 Score = 68.4 bits (168), Expect = 4e-15
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 145 LAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAP-K 203
           +   V   S NP +LA+ V   GG  +I+ V + E GS   I M R +GA W++D     
Sbjct: 1   VRFTVNGGS-NPYFLAVLVENVGGDGDIVAVEIKEAGSGEWIPMSRNWGANWQSDSVLLG 59

Query: 204 GPLQFGFPIVQGFDVKWIWAKNPVP 228
           GPL F   +      K + A N +P
Sbjct: 60  GPLSFR--VTSSDSGKTLVADNVIP 82

This family contains allergens lol PI, PII and PIII from Lolium perenne. Length = 82

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 14/85 (16%)

Query: 55  IAAAVPSIYKNGAACGGTCFQVRCKNRA----LCS-RKGTRVIVTDLNH-NNKTDMVLSR 108
            AA   S+Y +G ACG  C+QV+C   A     C   +   V +TD      +    LS 
Sbjct: 1   TAAGSASLYNDGTACGE-CYQVKCLTAAHPTGTCRVLRSVTVTITDRCPFPPRRHFDLSG 59

Query: 109 RAFRALANKGMDNEILKQRAVDVEY 133
            AF ALA         +   V VEY
Sbjct: 60  PAFEALAKP-------RAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|165628 PLN00050, PLN00050, expansin A; Provisional

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 36/217 (16%)

Query: 39  GACGYGSL-ALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLN 97
           GACGYG+L + G G+ + AA   +++ NG +CG  CF+++C N  +    G+ +I+T  N
Sbjct: 44  GACGYGNLYSQGYGT-NTAALSTALFNNGLSCGA-CFEIKCVNDNIWCLPGS-IIITATN 100

Query: 98  ---------HNN-------KTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYK 141
                    +N+       +    LS+  F+ +A         K   V V+Y RV C  K
Sbjct: 101 FCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQ-------YKAGIVPVQYRRVACR-K 152

Query: 142 HHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRA 201
              +   +   S     L   V   GG  +I+ V +    S  +  M R +G  W+++  
Sbjct: 153 SGGIRFTINGHSYFNLVLITNV---GGAGDIVAVSIKGSKSNWQA-MSRNWGQNWQSNSY 208

Query: 202 PKG-PLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTY 237
             G  L F    V   D + + + N  P++W  G TY
Sbjct: 209 LNGQALSFK---VTTSDGRTVISNNAAPSNWAFGQTY 242

Length = 247

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 31/229 (13%)

Query: 31  SKTSALSKGACGYGSL-ALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRA---LCSR 86
           S  S    GACGYG+L + G G+   AA   +++ +GA+C G C+++ C  +A    C  
Sbjct: 41  SDASGTMGGACGYGNLYSTGYGT-RTAALSTALFNDGASC-GQCYRIMCDYQADSRWC-I 97

Query: 87  KGTRVIVTDLN---------HNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVP 137
           KG  V +T  N         +NN        + F           I +   V V + RVP
Sbjct: 98  KGASVTITATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGIYRGGIVPVLFQRVP 157

Query: 138 CEYKHHNLAVRVEESSKNPNYLAIKVLYQ--GGKTEILGVVLSEYGSPVR-IDMRRKFGA 194
           C  KH  +   +       +Y  + VL    GG   I  V  S  GS    + M R +GA
Sbjct: 158 C-KKHGGVRFTI----NGRDYFEL-VLISNVGGAGSIQSV--SIKGSKTGWMAMSRNWGA 209

Query: 195 VWETDRAPKG-PLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQ 242
            W+++    G  L F      G    ++   N VPA+W  G T+ + VQ
Sbjct: 210 NWQSNAYLDGQSLSFKVTTTDGQTRFFL---NVVPANWGFGQTFSSSVQ 255

Length = 256

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	259
PLN03023	247	Expansin-like B1; Provisional	100.0
PLN00193	256	expansin-A; Provisional	100.0
PLN00050	247	expansin A; Provisional	100.0
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.97
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.96
PLN00115	118	pollen allergen group 3; Provisional	99.92
PF01357	82	Pollen_allerg_1: Pollen allergen; InterPro: IPR007	99.91
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.87
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.76
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	98.85
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	98.16
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	97.85
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	97.73
PRK10672	361	rare lipoprotein A; Provisional	97.17
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	87.47

>PLN03023 Expansin-like B1; Provisional

Probab=100.00  E-value=3.7e-69  Score=479.08  Aligned_cols=237  Identities=39%  Similarity=0.784  Sum_probs=216.3

Q ss_pred             hhHHHHHHHhhhhhcCCCCceeeEEEEeCCCCCC--CCcccCCCCCCCCCCCCeEEEeChhhhcCCccCCceEEEEEeCC
Q 025007            3 ILLCFLFFLLSSATACDHCVHQSKVSYFSKTSAL--SKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKN   80 (259)
Q Consensus         3 ~l~~~~~~~~~~~~~~~~~~~~g~aT~Y~~~~~~--~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~~C~~V~c~~   80 (259)
                      |||+++|++++ +..|+ +|++++|||||++++.  ++|||||+++..+.++.++||+| +||++|++|| +||||+|.+
T Consensus         8 ~~~~~~~~~~~-~~~~~-~W~~a~AT~Yg~~~g~gt~gGACGYg~~~~~~~g~~~aa~s-~Lf~~G~~CG-aCy~irC~~   83 (247)
T PLN03023          8 CFLCVIVLLPL-LCKSQ-DFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVS-RLYRNGTGCG-ACYQVRCKA   83 (247)
T ss_pred             HHHHHHHHhhh-hhhcC-CcccceEEEeCCCCCCCCCCccccCCccccCCCcceeeeeh-hhhcCCchhc-ccEEeecCC
Confidence            45555555555 44555 4999999999998754  78999999988888899999998 9999999999 999999999


Q ss_pred             CCcccCCCeEEEEccCCCCCCCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecCCceEEEEEecCCCCCceeE
Q 025007           81 RALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLA  160 (259)
Q Consensus        81 ~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~g~ni~~~v~~gS~n~~w~a  160 (259)
                      +++|++++|+|+|||.||.++.|||||.+||.+||.||++++|++.|+|+|+||||+|.++|++|+|+|+++|.+|+|++
T Consensus        84 ~~~C~~~~v~V~iTd~~~~~~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrRVpC~~~G~~i~F~V~~~s~~p~yl~  163 (247)
T PLN03023         84 PNLCSDDGVNVVVTDYGEGDKTDFILSPRAYARLARPNMAAELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLA  163 (247)
T ss_pred             CCccCCCCeEEEEEeCCCCCCCccccCHHHHHHHhCccccchhccCcEEEeEEEEEecccCCCceEEEEecCCCCCceEE
Confidence            99999999999999999999999999999999999999999999999999999999999998899999999984499999


Q ss_pred             EEEEeecCCcceEEEEEEECCCCCeEEccccCCcEEEeCCCCCCceEEEEEEEeCCCc-eEEEEccccCCCCCCCeEEec
Q 025007          161 IKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDV-KWIWAKNPVPADWKIGVTYDA  239 (259)
Q Consensus       161 v~v~n~gg~~~I~sVev~~~g~~~W~~m~r~~g~~W~~~~~~~~pl~~Rvt~t~~~~G-~~vv~~~vip~~w~~G~~y~t  239 (259)
                      ++|.|++|.++|++||||+.++..|++|+|+||++|++++++++||+||++++. .+| ++|+++||||++|++|++|++
T Consensus       164 vlv~~vgG~GdI~~V~Ik~~~~~~W~~M~rnwGa~W~~~~~l~Gp~slrf~v~~-~~g~~~vva~nViPa~Wk~G~TY~s  242 (247)
T PLN03023        164 IVMLYQAGQNDILAVEIWQEDCKEWRGMRKAYGAVWDMPNPPKGPITLRFQVSG-SAGQTWVQAKNVIPSDWKAGVAYDS  242 (247)
T ss_pred             EEEEEcCCCccEEEEEEEecCCCCceECccCCcceeEcCCCCCCceeEEEEEEe-CCCcEEEEECceeCCCCCCCCEEec
Confidence            999999999999999999987789999999999999999899999999998876 566 558999999999999999999


Q ss_pred             Ccccc
Q 025007          240 GVQIT  244 (259)
Q Consensus       240 ~~QF~  244 (259)
                      .+||+
T Consensus       243 ~vq~~  247 (247)
T PLN03023        243 NIQLD  247 (247)
T ss_pred             ccccC
Confidence            99995

>PLN00193 expansin-A; Provisional

Probab=100.00  E-value=1.3e-62  Score=439.24  Aligned_cols=209  Identities=22%  Similarity=0.460  Sum_probs=191.1

Q ss_pred             CCCceeeEEEEeCCCCCC--CCcccCCCCCCCCCCCCeEEEeChhhhcCCccCCceEEEEEeC---CCCcccCC-CeEEE
Q 025007           19 DHCVHQSKVSYFSKTSAL--SKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCK---NRALCSRK-GTRVI   92 (259)
Q Consensus        19 ~~~~~~g~aT~Y~~~~~~--~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~~C~~V~c~---~~~~C~~~-~v~V~   92 (259)
                      +.+|++|+||||+++++.  ++|||||+++...+++.++||+|++||++|++|| +||||+|.   ++++|.++ +|+|+
T Consensus        27 ~~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CG-aCyev~C~~~~~~~~C~~g~sV~Vt  105 (256)
T PLN00193         27 PSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCG-QCYRIMCDYQADSRWCIKGASVTIT  105 (256)
T ss_pred             CCCceeeEEEEcCCCCCCCCCCcccCCCCccccCCCceeeecCHhHccCCcccc-CeEEEECCCCCCCccccCCCeEEEE
Confidence            446999999999987653  6899999998888899999999999999999999 99999994   56789654 79999


Q ss_pred             EccCCCC--------------CCCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecCCceEEEEEecCCCCCce
Q 025007           93 VTDLNHN--------------NKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNY  158 (259)
Q Consensus        93 VtD~Cp~--------------~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~g~ni~~~v~~gS~n~~w  158 (259)
                      |||+||+              ++.|||||++||.+||.       ++.|+|+|+||||+|+++| +|+|++++   |+||
T Consensus       106 ~td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA~-------~~~Giv~V~yrRVpC~~~G-~i~f~v~g---n~y~  174 (256)
T PLN00193        106 ATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGI-------YRGGIVPVLFQRVPCKKHG-GVRFTING---RDYF  174 (256)
T ss_pred             EecCCCCcccccccCCCcCCCCCcccccCHHHHHHHhh-------hcCCeEeEEEEEeccccCC-CcEEEEcC---CccE
Confidence            9999996              46899999999999998       6799999999999999998 99999983   6899


Q ss_pred             eEEEEEeecCCcceEEEEEEECCCCCeEEccccCCcEEEeCCCCCC-ceEEEEEEEeCCCceEEEEccccCCCCCCCeEE
Q 025007          159 LAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKG-PLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTY  237 (259)
Q Consensus       159 ~av~v~n~gg~~~I~sVev~~~g~~~W~~m~r~~g~~W~~~~~~~~-pl~~Rvt~t~~~~G~~vv~~~vip~~w~~G~~y  237 (259)
                      ++++|.|++|.++|++|||++.+ ..|++|+|+||++|+++.++.+ ||+||||  + .+|+++++.||||++|++|++|
T Consensus       175 ~~vlv~nv~G~gdV~~v~Ik~~~-~~W~~M~R~wGa~W~~~~~l~g~plsfRvt--s-~~G~~~~~~~viPa~W~~G~ty  250 (256)
T PLN00193        175 ELVLISNVGGAGSIQSVSIKGSK-TGWMAMSRNWGANWQSNAYLDGQSLSFKVT--T-TDGQTRFFLNVVPANWGFGQTF  250 (256)
T ss_pred             EEEEEEEeCCCccEEEEEEecCC-CCeeECcccccceeEecCCCCCCCEEEEEE--E-cCCeEEEECceeCCCCCCCCeE
Confidence            99999999999999999999865 4899999999999999987655 9999999  4 6799999999999999999999


Q ss_pred             ecCccc
Q 025007          238 DAGVQI  243 (259)
Q Consensus       238 ~t~~QF  243 (259)
                      ++.+||
T Consensus       251 ~s~vqf  256 (256)
T PLN00193        251 SSSVQF  256 (256)
T ss_pred             ecCccC
Confidence            999998

>PLN00050 expansin A; Provisional

Probab=100.00  E-value=1.2e-61  Score=431.43  Aligned_cols=208  Identities=24%  Similarity=0.477  Sum_probs=190.2

Q ss_pred             CCCceeeEEEEeCCCCCC--CCcccCCCCCCCCCCCCeEEEeChhhhcCCccCCceEEEEEeCCC-CcccCCCeEEEEcc
Q 025007           19 DHCVHQSKVSYFSKTSAL--SKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNR-ALCSRKGTRVIVTD   95 (259)
Q Consensus        19 ~~~~~~g~aT~Y~~~~~~--~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~~C~~V~c~~~-~~C~~~~v~V~VtD   95 (259)
                      ..+|..++|||||++++.  ++|||||+++..++++.++||+|+++|++|++|| +||||+|.+. ++|.+++|+|+|||
T Consensus        22 ~~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CG-aCyeV~C~~~~~~C~~gsV~V~itd  100 (247)
T PLN00050         22 GSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG-ACFEIKCVNDNIWCLPGSIIITATN  100 (247)
T ss_pred             CCCccccEEEEcCCCCCCCCCCcccCCCCccccCCCceeeeccHhHccCCcccc-ceEEEEcCCCCcccCCCcEEEEEec
Confidence            457999999999987654  6899999998888899999999999999999999 9999999654 57998899999999


Q ss_pred             CCCC--------------CCCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecCCceEEEEEecCCCCCceeEE
Q 025007           96 LNHN--------------NKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAI  161 (259)
Q Consensus        96 ~Cp~--------------~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~g~ni~~~v~~gS~n~~w~av  161 (259)
                      +||+              ++.|||||++||.+||.       ++.|+|+|+||||+|.++| ||+|+++++   +||+++
T Consensus       101 ~CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~-------~~aGii~V~yRRVpC~~~G-~i~f~v~g~---sy~~~v  169 (247)
T PLN00050        101 FCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQ-------YKAGIVPVQYRRVACRKSG-GIRFTINGH---SYFNLV  169 (247)
T ss_pred             CCCCCcCcCccCCCcCCCCCcccccCHHHHHHHhh-------hcCCeeeeEEEEecCcCCC-CeEEEEcCC---ceeEEE
Confidence            9996              46899999999999998       6799999999999999998 999999864   599999


Q ss_pred             EEEeecCCcceEEEEEEECCCCCeEEccccCCcEEEeCCCCCC-ceEEEEEEEeCCCceEEEEccccCCCCCCCeEEecC
Q 025007          162 KVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKG-PLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG  240 (259)
Q Consensus       162 ~v~n~gg~~~I~sVev~~~g~~~W~~m~r~~g~~W~~~~~~~~-pl~~Rvt~t~~~~G~~vv~~~vip~~w~~G~~y~t~  240 (259)
                      +|.|++|.++|++|+|++.+ ..|++|+|+||++|++++++.+ ||+||||  + .+|+++++.||||++|++|++|++.
T Consensus       170 lv~nv~G~gdi~~V~ikg~~-~~W~~M~R~wGa~W~~~~~l~g~~lsfRvt--~-~~G~~~~~~~V~Pa~W~~G~ty~~~  245 (247)
T PLN00050        170 LITNVGGAGDIVAVSIKGSK-SNWQAMSRNWGQNWQSNSYLNGQALSFKVT--T-SDGRTVISNNAAPSNWAFGQTYTGM  245 (247)
T ss_pred             EEEEcCCCccEEEEEEecCC-CCeeECccccCceeEccCCCCCCcEEEEEE--e-cCCcEEEECceeCCCCCCCCeEecC
Confidence            99999999999999999865 4899999999999999887655 9999999  4 6799999999999999999999995


Q ss_pred             ccc
Q 025007          241 VQI  243 (259)
Q Consensus       241 ~QF  243 (259)
                       ||
T Consensus       246 -~f  247 (247)
T PLN00050        246 -QF  247 (247)
T ss_pred             -cC
Confidence             88

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.97  E-value=3e-29  Score=210.23  Aligned_cols=194  Identities=23%  Similarity=0.247  Sum_probs=163.0

Q ss_pred             ceeeEEEEeCCCCCCCCcccCCCCCCCCCCCCeEEEeChhhhcCC----ccCCceEEEEEeCCCCcccCCCeEEEEccCC
Q 025007           22 VHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNG----AACGGTCFQVRCKNRALCSRKGTRVIVTDLN   97 (259)
Q Consensus        22 ~~~g~aT~Y~~~~~~~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g----~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~C   97 (259)
                      -+.|.|||-+.++  .+||-....   .+....|.|+|++.-|-|    +.-| +.++|.  +|    .+..+|.|||+-
T Consensus        30 ~f~G~ATyTgsGY--sGGAflLDP---I~sd~eITAlNPaqlNlGGipAAmAG-aYLrVq--GP----KG~TTVYVTDlY   97 (232)
T COG4305          30 LFEGYATYTGSGY--SGGAFLLDP---IPSDMEITALNPAQLNLGGIPAAMAG-AYLRVQ--GP----KGKTTVYVTDLY   97 (232)
T ss_pred             ccceeEEEecccc--cCceEEecC---cCCcceeeecCHHHcccCCchhhhcc-ceEEEE--CC----CCceEEEEeccc
Confidence            5689999988765  578875443   345678999999888766    4578 999998  54    345899999999


Q ss_pred             CCC-CCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecCCceEEEEEecCCCCCceeEEEEEeecCCcceEEEE
Q 025007           98 HNN-KTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVV  176 (259)
Q Consensus        98 p~~-~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~g~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVe  176 (259)
                      |+. ...+|||+.||.+|++       +.+|+|+|+||.|+-+.+| |+.+|+|||| +.||-++||+||  +.+|.++|
T Consensus        98 PegasGaLDLSpNAFakIGn-------m~qGrIpvqWrvv~aPvtG-N~~YRiKeGS-s~WWAAIQVRnH--~yPV~KlE  166 (232)
T COG4305          98 PEGASGALDLSPNAFAKIGN-------MKQGRIPVQWRVVKAPVTG-NFTYRIKEGS-SRWWAAIQVRNH--KYPVMKLE  166 (232)
T ss_pred             ccccccccccChHHHhhhcc-------hhcCccceeEEEecccccc-cEEEEEecCC-ccceeeeeeecc--cCceEEEE
Confidence            985 7899999999999999       7899999999999999998 9999999999 899999999977  89999999


Q ss_pred             EEECCCCCeEEccccCCcEEEeCCCCCCceEEEEEEEeCCCceEEEEccccCCCCCCC--e--EEecCccccc
Q 025007          177 LSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIG--V--TYDAGVQITD  245 (259)
Q Consensus       177 v~~~g~~~W~~m~r~~g~~W~~~~~~~~pl~~Rvt~t~~~~G~~vv~~~vip~~w~~G--~--~y~t~~QF~~  245 (259)
                      +.++  +.|..|.+.+||+|.-.+...+||.+|+|  + +.|+.++..  +|.--+.+  +  +..+.+||++
T Consensus       167 ~~qd--g~WinlpK~dYNhFVgT~LG~~pL~~RmT--D-IRG~~l~Dt--lP~Lpk~asSKaY~V~G~VQFsE  232 (232)
T COG4305         167 YEQD--GKWINLPKMDYNHFVGTNLGTGPLKVRMT--D-IRGKVLKDT--LPKLPKSASSKAYTVPGHVQFSE  232 (232)
T ss_pred             EecC--CeEeeccccccceeeccccCCCceEEEEe--e-cccceeecc--cccccccccCCceeecceeecCC
Confidence            9986  49999999999999888888999999998  6 999998754  33322433  2  3368899975

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.96  E-value=1e-28  Score=199.83  Aligned_cols=98  Identities=30%  Similarity=0.525  Sum_probs=86.4

Q ss_pred             eeeEEEEeCCCCCCCCcccCCCCCCCCCCCCeEEEeChhhhcCCccCCceEEEEEeCCC-----CcccCCCeEEEEccCC
Q 025007           23 HQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNR-----ALCSRKGTRVIVTDLN   97 (259)
Q Consensus        23 ~~g~aT~Y~~~~~~~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~~C~~V~c~~~-----~~C~~~~v~V~VtD~C   97 (259)
                      .+|+||||+++   ..||| |++   ..++.++||+|+.+|++|+.|| +||||+|.++     .+|++++|+|+|+|+|
T Consensus        22 ~~G~AT~Y~~~---~~gAC-~~~---~~~g~~iaAls~~lf~~G~~CG-~c~~V~C~~~~~~~~~~c~gksV~V~VtD~C   93 (125)
T PLN03024         22 TPGIATFYTSY---TPSAC-YRG---TSFGVMIAAASDSLWNNGRVCG-KMFTVKCKGPRNAVPHPCTGKSVTVKIVDHC   93 (125)
T ss_pred             cceEEEEeCCC---CCccc-cCC---CCCCCEeEEeCHHHcCCCcccC-ceEEEEECCCCccccccccCCeEEEEEEcCC
Confidence            47999999975   46899 544   2467899999999999999999 9999999765     3799999999999999


Q ss_pred             C-CCCCceeeCHHHHHHHHccCCchhhccCceEEEEEEE
Q 025007           98 H-NNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIR  135 (259)
Q Consensus        98 p-~~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~  135 (259)
                      | .|..|||||++||.+||+       .+.|+|+|+|.+
T Consensus        94 P~~C~~~~DLS~~AF~~iA~-------~~aG~v~V~y~~  125 (125)
T PLN03024         94 PSGCASTLDLSREAFAQIAN-------PVAGIINIDYIP  125 (125)
T ss_pred             CCCCCCceEcCHHHHHHhcC-------ccCCEEEEEEeC
Confidence            9 588899999999999999       468999999974

>PLN00115 pollen allergen group 3; Provisional

Probab=99.92  E-value=5.5e-25  Score=176.05  Aligned_cols=92  Identities=21%  Similarity=0.391  Sum_probs=83.9

Q ss_pred             ceEEEEEecCCCCCceeEEEEEeecCCcceEEEEEEECCCCCeE-EccccCCcEEEeCC--CCCCceEEEEEEEeCCCce
Q 025007          143 HNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRI-DMRRKFGAVWETDR--APKGPLQFGFPIVQGFDVK  219 (259)
Q Consensus       143 ~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVev~~~g~~~W~-~m~r~~g~~W~~~~--~~~~pl~~Rvt~t~~~~G~  219 (259)
                      .+|+|+|+++| ||+||++++ |    ++|.+|||++.++..|+ +|+|+||++|++++  +++|||+||+|  + .+|+
T Consensus        24 ~~v~F~V~~gS-np~yL~ll~-~----~dI~~V~Ik~~g~~~W~~~M~rswGavW~~~s~~pl~GPlS~R~t--~-~~G~   94 (118)
T PLN00115         24 TEVTFKVGKGS-SSTSLELVT-N----VAISEVEIKEKGAKDWVDDLKESSTNTWTLKSKAPLKGPFSVRFL--V-KGGG   94 (118)
T ss_pred             CceEEEECCCC-CcceEEEEE-e----CCEEEEEEeecCCCcccCccccCccceeEecCCCCCCCceEEEEE--E-eCCC
Confidence            59999999999 899998765 3    37999999999888999 99999999999874  67999999999  4 6789


Q ss_pred             EEEEccccCCCCCCCeEEecCccc
Q 025007          220 WIWAKNPVPADWKIGVTYDAGVQI  243 (259)
Q Consensus       220 ~vv~~~vip~~w~~G~~y~t~~QF  243 (259)
                      +++++||||++|++|++|++++||
T Consensus        95 ~~va~nViPa~Wk~G~tY~s~vq~  118 (118)
T PLN00115         95 YRVVDDVIPESFKAGSVYKTGIQV  118 (118)
T ss_pred             EEEECceECCCCCCCCEEeccccC
Confidence            999999999999999999999997

>PF01357 Pollen_allerg_1: Pollen allergen; InterPro: IPR007117 Expansins are unusual proteins that mediate cell wall extension in plants []

Probab=99.91  E-value=4.3e-24  Score=161.25  Aligned_cols=81  Identities=38%  Similarity=0.625  Sum_probs=68.3

Q ss_pred             EEEEEecCCCCCceeEEEEEeecCCcceEEEEEEECCCCCeEEccccCCcEEEeC-CCCCCceEEEEEEEeCCCceEEEE
Q 025007          145 LAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETD-RAPKGPLQFGFPIVQGFDVKWIWA  223 (259)
Q Consensus       145 i~~~v~~gS~n~~w~av~v~n~gg~~~I~sVev~~~g~~~W~~m~r~~g~~W~~~-~~~~~pl~~Rvt~t~~~~G~~vv~  223 (259)
                      |+|+|+++| |+|||+++|.|++|.++|++|||++.++..|++|+|+||++|+++ +++++||+||||  +..+|+++++
T Consensus         1 v~f~V~~gS-~~~~l~v~v~n~gG~gdi~~Vevk~~~s~~W~~m~r~wGa~W~~~~~~~~~pls~Rvt--s~~~G~~vv~   77 (82)
T PF01357_consen    1 VRFTVKGGS-NPYYLAVLVKNVGGDGDIKAVEVKQSGSGNWIPMKRSWGAVWQIDSNPPGGPLSFRVT--SGDSGQTVVA   77 (82)
T ss_dssp             EEEEE-TT--BTTEEEEEEEECCTTS-EEEEEEEETTSSS-EE-EEECTTEEEEE-SS--SSEEEEEE--ETTTSEEEEE
T ss_pred             CEEEECCCC-CCcEEEEEEEEcCCCccEEEEEEEeCCCCCceEeecCcCceEEECCCCcCCCEEEEEE--EcCCCeEEEE
Confidence            689999999 999999999999999999999999999889999999999999998 788999999998  4244999999


Q ss_pred             ccccC
Q 025007          224 KNPVP  228 (259)
Q Consensus       224 ~~vip  228 (259)
                      +||||
T Consensus        78 ~nViP   82 (82)
T PF01357_consen   78 DNVIP   82 (82)
T ss_dssp             EEEE-
T ss_pred             ecccC
Confidence            99998

They are believed to act as a sort of chemical grease, allowing polymers to slide past one another by disrupting non-covalent hydrogen bonds that hold many wall polymers to one another. This process is not degradative and hence does not weaken the wall, which could otherwise rupture under internal pressure during growth. Sequence comparisons indicate at least four distinct expansin cDNAs in rice and at least six in Arabidopsis. The proteins are highly conserved in size and sequence (75-95% amino acid sequence similarity between any pairwise comparison), and phylogenetic trees indicate that this multigene family formed before the evolutionary divergence of monocotyledons and dicotyledons []. Sequence and motif analyses show no similarities to known functional domains that might account for expansin action on wall extension. It is thought that several highly-conserved tryptophans may function in expansin binding to cellulose, or other glycans. The high conservation of the family indicates that the mechanism by which expansins promote wall extensin tolerates little variation in protein structure. Grass pollens, such as pollen from timothy grass, represent a major cause of type I allergy []. Interestingly, expansins share a high degree of sequence similarity with the Lol p I family of allergens. This entry represents the C-terminal domain.; PDB: 2VXQ_A 1WHP_A 1BMW_A 1WHO_A 2HCZ_X 2JNZ_A 3FT9_A 3FT1_C 1N10_B.

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.87  E-value=1.6e-22  Score=154.22  Aligned_cols=71  Identities=30%  Similarity=0.598  Sum_probs=64.0

Q ss_pred             EEEeChhhhcCCccCCceEEEEEeC-CCCcccCC-CeEEEEccCCCC--------------CCCceeeCHHHHHHHHccC
Q 025007           55 IAAAVPSIYKNGAACGGTCFQVRCK-NRALCSRK-GTRVIVTDLNHN--------------NKTDMVLSRRAFRALANKG  118 (259)
Q Consensus        55 ~aA~s~~~~~~g~~CG~~C~~V~c~-~~~~C~~~-~v~V~VtD~Cp~--------------~~~~~DLs~~AF~~ia~~g  118 (259)
                      +||+|++||++|++|| +||||+|. +++.|.++ +|+|+|||+||+              ++.|||||++||.+||+  
T Consensus         1 taA~s~~lf~~G~~CG-~Cy~v~C~~~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA~--   77 (87)
T smart00837        1 TAALSTALFNNGASCG-ACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIAQ--   77 (87)
T ss_pred             CcccCHHHccCCcccc-ceEEEEeCCCCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHhh--
Confidence            4899999999999999 99999996 56679874 899999999996              26899999999999999  


Q ss_pred             CchhhccCceEEEEE
Q 025007          119 MDNEILKQRAVDVEY  133 (259)
Q Consensus       119 ~~~~l~~~G~v~v~~  133 (259)
                           ++.|+|+|+|
T Consensus        78 -----~~~Gvi~v~y   87 (87)
T smart00837       78 -----YKAGIVPVKY   87 (87)
T ss_pred             -----hcCCEEeeEC
Confidence                 5799999987

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.76  E-value=1.1e-18  Score=130.04  Aligned_cols=71  Identities=38%  Similarity=0.620  Sum_probs=60.0

Q ss_pred             EEEeChhhhcCCccCCceEEEEEeC--CCCc--ccC--CCeEEEEccCCCCC-CCceeeCHHHHHHHHccCCchhhccCc
Q 025007           55 IAAAVPSIYKNGAACGGTCFQVRCK--NRAL--CSR--KGTRVIVTDLNHNN-KTDMVLSRRAFRALANKGMDNEILKQR  127 (259)
Q Consensus        55 ~aA~s~~~~~~g~~CG~~C~~V~c~--~~~~--C~~--~~v~V~VtD~Cp~~-~~~~DLs~~AF~~ia~~g~~~~l~~~G  127 (259)
                      +||++..+|++|.+|| +||+++|.  .+..  |..  ++|+|+|+|+||++ ..|||||+.||++|+.       ++.|
T Consensus         1 t~a~~~~~y~~g~~cG-~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~Cp~~~~~~lDLS~~aF~~la~-------~~~G   72 (78)
T PF03330_consen    1 TAAGSATWYDNGTACG-QCYQVTCLTAASATGTCKVGNKSVTVTVVDRCPGCPPNHLDLSPAAFKALAD-------PDAG   72 (78)
T ss_dssp             EEEE-HHHHGGGTTTT--EEEEEE---SSTT--BESEECEEEEEEEEE-TTSSSSEEEEEHHHHHHTBS-------TTCS
T ss_pred             CeEEEhhhcCCCCcCC-CeeeccccccCCccceEEecCCeEEEEEEccCCCCcCCEEEeCHHHHHHhCC-------CCce
Confidence            5899999999999999 99999993  2333  776  89999999999985 6899999999999998       5799


Q ss_pred             eEEEEE
Q 025007          128 AVDVEY  133 (259)
Q Consensus       128 ~v~v~~  133 (259)
                      +++|+|
T Consensus        73 ~i~V~w   78 (78)
T PF03330_consen   73 VIPVEW   78 (78)
T ss_dssp             SEEEEE
T ss_pred             EEEEEC
Confidence            999999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=98.85  E-value=2.4e-09  Score=84.72  Aligned_cols=63  Identities=24%  Similarity=0.440  Sum_probs=45.4

Q ss_pred             CccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCCCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEee
Q 025007           66 GAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPC  138 (259)
Q Consensus        66 g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C  138 (259)
                      -..|| +|++|+-+.    ++.+++|+|+|+|+.+  +|||.+.+|.+|-..|++   ...|.+.|.|++|+|
T Consensus        57 q~~CG-kClrVTNt~----tga~~~~RIVDqCsnG--GLDld~~vF~~iDtdG~G---~~~Ghl~V~y~fV~C  119 (119)
T PF00967_consen   57 QDSCG-KCLRVTNTA----TGAQVTVRIVDQCSNG--GLDLDPTVFNQIDTDGQG---YAQGHLIVDYEFVDC  119 (119)
T ss_dssp             GGGTT--EEEEE-TT----T--EEEEEEEEE-SSS--SEES-SSSHHHH-SSSHH---HHHTEEEEEEEEE--
T ss_pred             ccccc-ceEEEEecC----CCcEEEEEEEEcCCCC--CcccChhHHhhhccCCcc---cccceEEEEEEEEcC
Confidence            36799 999999543    3567999999999988  999999999999754422   468999999999998

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=98.16  E-value=1.5e-05  Score=64.24  Aligned_cols=69  Identities=25%  Similarity=0.399  Sum_probs=48.5

Q ss_pred             eEEEeChh-hhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCCCceeeCHHHHHHHHccCCchhhccCceEEEE
Q 025007           54 HIAAAVPS-IYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVE  132 (259)
Q Consensus        54 ~~aA~s~~-~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~  132 (259)
                      +|.+.... -| |...|| .|+|++-.      ++++.|..+|.-+   ..|+|+.+||+.|.+. ++   ...|+|+++
T Consensus        44 ~IGg~~~V~gW-nS~~CG-tC~~lty~------g~si~vlaID~a~---~gfnis~~A~n~LT~g-~a---~~lG~V~a~  108 (119)
T PF07249_consen   44 YIGGAPAVAGW-NSPNCG-TCWKLTYN------GRSIYVLAIDHAG---GGFNISLDAMNDLTNG-QA---VELGRVDAT  108 (119)
T ss_dssp             SEEEETT--ST-T-TTTT--EEEEEET------TEEEEEEEEEE-S---SSEEE-HHHHHHHHTS--C---CCC-EEE-E
T ss_pred             eeccccccccC-CCCCCC-CeEEEEEC------CeEEEEEEEecCC---CcccchHHHHHHhcCC-cc---cceeEEEEE
Confidence            57777654 46 558899 99999963      5789999999854   3599999999999872 22   356999999


Q ss_pred             EEEEe
Q 025007          133 YIRVP  137 (259)
Q Consensus       133 ~r~V~  137 (259)
                      |++|+
T Consensus       109 ~~qV~  113 (119)
T PF07249_consen  109 YTQVD  113 (119)
T ss_dssp             EEEE-
T ss_pred             EEEcC
Confidence            99997

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>TIGR00413 rlpA rare lipoprotein A

Probab=97.85  E-value=0.00013  Score=63.73  Aligned_cols=95  Identities=16%  Similarity=0.063  Sum_probs=68.3

Q ss_pred             eEEEEeCCCCCCCCcccCCCCCCCCCCCCeEEEeChhhhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCC-CCCc
Q 025007           25 SKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHN-NKTD  103 (259)
Q Consensus        25 g~aT~Y~~~~~~~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~~~  103 (259)
                      |.|+|||..-.....|.|-.-.    ...++||-.+ |     ..| ...+|+...    ++++|+|+|.|++|. ...-
T Consensus         1 G~ASwYg~~f~G~~TAnGe~y~----~~~~tAAHkt-L-----Plg-T~V~VtNl~----ngrsviVrVnDRGPf~~gRi   65 (208)
T TIGR00413         1 GLASWYGPKFHGRKTANGEVYN----MKALTAAHKT-L-----PFN-TYVKVTNLH----NNRSVIVRINDRGPFSDDRI   65 (208)
T ss_pred             CEEeEeCCCCCCCcCCCCeecC----CCcccccccc-C-----CCC-CEEEEEECC----CCCEEEEEEeCCCCCCCCCE
Confidence            6899999742112344443210    1124555432 2     577 989999654    368899999999997 5679


Q ss_pred             eeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecC
Q 025007          104 MVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYK  141 (259)
Q Consensus       104 ~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~  141 (259)
                      +|||+.|+.+|+-       ...|+.+|+.+.+.....
T Consensus        66 IDLS~aAA~~Lg~-------~~~G~a~V~vevl~~~~~   96 (208)
T TIGR00413        66 IDLSHAAAREIGL-------ISRGVGQVRIEVLHVAKN   96 (208)
T ss_pred             EECCHHHHHHcCC-------CcCceEEEEEEEEecCCC
Confidence            9999999999987       578999999999987654

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=97.73  E-value=0.00019  Score=63.83  Aligned_cols=57  Identities=16%  Similarity=0.112  Sum_probs=49.3

Q ss_pred             eEEEEEeCCCCcccCCCeEEEEccCCCC-CCCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeee
Q 025007           72 TCFQVRCKNRALCSRKGTRVIVTDLNHN-NKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCE  139 (259)
Q Consensus        72 ~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~  139 (259)
                      .-.+|+-.+    ++++|+|+|.|++|- ....||||..|+++|+-       .+.|+.+|+.+++.+.
T Consensus       121 t~v~VtNl~----NgrsvvVRINDRGPf~~gRiIDlS~aAA~~l~~-------~~~G~a~V~i~~l~~~  178 (233)
T COG0797         121 TYVRVTNLD----NGRSVVVRINDRGPFVSGRIIDLSKAAADKLGM-------IRSGVAKVRIEVLGVA  178 (233)
T ss_pred             CEEEEEEcc----CCcEEEEEEeCCCCCCCCcEeEcCHHHHHHhCC-------ccCceEEEEEEEeccc
Confidence            678898665    378999999999997 56799999999999997       5789999999999876

>PRK10672 rare lipoprotein A; Provisional

Probab=97.17  E-value=0.0033  Score=59.39  Aligned_cols=89  Identities=17%  Similarity=0.066  Sum_probs=60.6

Q ss_pred             eeEEEEeCCCCCCCCcccCCCCCCCCCCC--CeEEEeChhhhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCC-C
Q 025007           24 QSKVSYFSKTSALSKGACGYGSLALGLGS--GHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHN-N  100 (259)
Q Consensus        24 ~g~aT~Y~~~~~~~~GaCGyg~~~~~~~~--~~~aA~s~~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~  100 (259)
                      .|.|+|||........|-|-      .|.  .++||-.+-      .-| ...+|+...    ++++|+|+|.|++|. .
T Consensus        80 ~G~ASwYg~~f~G~~TA~Ge------~~~~~~~tAAH~tL------Plp-s~vrVtNl~----ngrsvvVrVnDRGP~~~  142 (361)
T PRK10672         80 AGLAAIYDAEAGSNLTASGE------RFDPNALTAAHPTL------PIP-SYVRVTNLA----NGRMIVVRINDRGPYGP  142 (361)
T ss_pred             EEEEEEeCCccCCCcCcCce------eecCCcCeeeccCC------CCC-CEEEEEECC----CCcEEEEEEeCCCCCCC
Confidence            58888888742101122221      222  245554332      356 889999655    478999999999997 5


Q ss_pred             CCceeeCHHHHHHHHccCCchhhccCceEEEEEEEE
Q 025007          101 KTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRV  136 (259)
Q Consensus       101 ~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V  136 (259)
                      ..-||||..|+++|+-       ...+.|.|+.-.|
T Consensus       143 gRiiDLS~aAA~~Lg~-------~~~~~V~ve~i~v  171 (361)
T PRK10672        143 GRVIDLSRAAADRLNT-------SNNTKVRIDPIIV  171 (361)
T ss_pred             CCeeEcCHHHHHHhCC-------CCCceEEEEEEee
Confidence            6799999999999987       3457778877766

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=87.47  E-value=0.49  Score=41.45  Aligned_cols=53  Identities=19%  Similarity=0.203  Sum_probs=31.5

Q ss_pred             EEEeChhhhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCC-CCCceeeCHH
Q 025007           55 IAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHN-NKTDMVLSRR  109 (259)
Q Consensus        55 ~aA~s~~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~~~~DLs~~  109 (259)
                      +||.+-.-......|+ +|||++=++. .-.+|...|+||+.--+ ..+||||.-+
T Consensus        70 faA~~~~G~~e~~~Cc-~Cy~LtFt~g-~l~GKkmiVQ~tNtG~dlg~n~FDl~iP  123 (201)
T PF02015_consen   70 FAAASITGGSESSWCC-ACYELTFTSG-PLKGKKMIVQVTNTGGDLGSNQFDLAIP  123 (201)
T ss_dssp             EEEEE-TT--HHHHTT--EEEEEE-SS-TTTT-EEEEEEEEE-TTTTTTEEEEE-T
T ss_pred             eeeeeecCCCCCCccc-ceEEEEEcCC-CcCCCEeEEEecccCCCCCCCeEEEEeC
Confidence            5666522111226799 9999997652 23467889999988765 6789998654

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	259
2hcz_X	245	Crystal Structure Of Expb1 (Zea M 1), A Beta-Expans		5e-20
1n10_A	241	Crystal Structure Of Phl P 1, A Major Timothy Grass		5e-18

>pdb|2HCZ|X Chain X, Crystal Structure Of Expb1 (Zea M 1), A Beta-Expansin And Group-1 Pollen Allergen From Maize Length = 245

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 62  IYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNN--KTDMVLSRRAFRALANKGM 119
           I+K+G  CG +C++VRCK +  CS     V +TD+N+         LS +AF +LA  G+
Sbjct: 63  IFKDGKGCG-SCYEVRCKEKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGL 121
Query: 120 DNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSE 179
           +++I     +DVE+ RV C+Y      V   E   NPNYLA+ V Y     +I+ + + +
Sbjct: 122 NDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQD 181
Query: 180 YGSPVRIDMRRKFGAVWETD--RAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTY 237
             S     M+  +GA+W  D  +A KGP         G   K + AK+ +PA+W+    Y
Sbjct: 182 KLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESG---KKVIAKDVIPANWRPDAVY 238
Query: 238 DAGVQI 243
            + VQ 
Sbjct: 239 TSNVQF 244

>pdb|1N10|A Chain A, Crystal Structure Of Phl P 1, A Major Timothy Grass Pollen Allergen Length = 241

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 62  IYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNN--KTDMVLSRRAFRALANKGM 119
           I+K+G  CG +CF+++C     CS +   V +TD N          LS  AF A+A KG 
Sbjct: 63  IFKSGRGCG-SCFEIKCTKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGD 121
Query: 120 DNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSE 179
           + ++     +++++ RV C+Y          E   NPNYLA+ V Y  G  +++ V + E
Sbjct: 122 EQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKE 181
Query: 180 YGSPVRIDMRRKFGAVWETDRAPK--GPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTY 237
            G    I+++  +GA+W  D   K  GP    +    G   +   A++ +P  WK   +Y
Sbjct: 182 KGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKTE---AEDVIPEGWKADTSY 238
Query: 238 DA 239
           ++
Sbjct: 239 ES 240

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	259
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	7e-46
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	3e-44
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	3e-22
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	5e-22
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	4e-21
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	7e-18

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score =  153 bits (386), Expect = 7e-46
 Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 8/213 (3%)

Query: 34  SALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIV 93
           +  + GACG  ++ L   SG  A     I+K+G  CG +C++VRCK +  CS     V +
Sbjct: 35  APDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCG-SCYEVRCKEKPECSGNPVTVYI 93

Query: 94  TDLNHN--NKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEE 151
           TD+N+         LS +AF +LA  G++++I     +DVE+ RV C+Y      V   E
Sbjct: 94  TDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIE 153

Query: 152 SSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETD--RAPKGPLQFG 209
              NPNYLA+ V Y     +I+ + + +  S     M+  +GA+W  D  +A KGP    
Sbjct: 154 KGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSI- 212

Query: 210 FPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQ 242
              +     K + AK+ +PA+W+    Y + VQ
Sbjct: 213 --RLTSESGKKVIAKDVIPANWRPDAVYTSNVQ 243

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score =  148 bits (375), Expect = 3e-44
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 9/232 (3%)

Query: 14  SATACDHCVHQSKVSYFSKTSA----LSKGACGYGSLALGLGSGHIAAAVPSIYKNGAAC 69
           +AT  D     +K +++ K +      + GACGY  +     SG        I+K+G  C
Sbjct: 12  TATYGDKW-LDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGC 70

Query: 70  GGTCFQVRCKNRALCSRKGTRVIVTDLNH--NNKTDMVLSRRAFRALANKGMDNEILKQR 127
           G +CF+++C     CS +   V +TD N          LS  AF A+A KG + ++    
Sbjct: 71  G-SCFEIKCTKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAG 129

Query: 128 AVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRID 187
            +++++ RV C+Y          E   NPNYLA+ V Y  G  +++ V + E G    I+
Sbjct: 130 ELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIE 189

Query: 188 MRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDA 239
           ++  +GA+W  D   K    F              A++ +P  WK   +Y++
Sbjct: 190 LKESWGAIWRIDTPDKLTGPFTV-RYTTEGGTKTEAEDVIPEGWKADTSYES 240

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} PDB: 3ft9_A Length = 100

 Score = 87.2 bits (216), Expect = 3e-22
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 144 NLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETD--RA 201
            +   V++ S +P  L + + Y      +  V L ++GS     + +K G VWE    + 
Sbjct: 3   QVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKP 60

Query: 202 PKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQ 242
             GP  F F    G           +P  + IG TY    Q
Sbjct: 61  LVGPFNFRFMSKGG---MRNVFDEVIPTAFSIGKTYKPEEQ 98

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score = 89.5 bits (222), Expect = 5e-22
 Identities = 42/227 (18%), Positives = 76/227 (33%), Gaps = 33/227 (14%)

Query: 22  VHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACG---GTCFQVRC 78
           +H+   +Y    S  S GA     +        I A  P+    G       G+  +V  
Sbjct: 6   LHEGYATYT--GSGYSGGAFLLDPIP---SDMEITAINPADLNYGGVKAALAGSYLEVEG 60

Query: 79  KNRALCSRKGTRVIVTDLNHN-NKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVP 137
                     T V VTDL     +  + LS  AFR + N       +K   +++++  V 
Sbjct: 61  PK------GKTTVYVTDLYPEGARGALDLSPNAFRKIGN-------MKDGKINIKWRVVK 107

Query: 138 CEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWE 197
                 N   R++E S +  + A  +  +  K  ++ +   + G    I+M +     + 
Sbjct: 108 APIT-GNFTYRIKEGS-SRWWAA--IQVRNHKYPVMKMEYEKDGKW--INMEKMDYNHFV 161

Query: 198 TDRAPKGPLQFGFPIVQGFDVKWIWAKNPV--PADWKIGVTYDAGVQ 242
           +     G L+     +     K +    P    +      T    VQ
Sbjct: 162 STNLGTGSLKV---RMTDIRGKVVKDTIPKLPESGTSKAYTVPGHVQ 205

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense} Length = 108

 Score = 84.1 bits (208), Expect = 4e-21
 Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 11/116 (9%)

Query: 127 RAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRI 186
           R     +           +   V++ S +P  L + + Y      +  V L ++GS    
Sbjct: 1   RGSHHHHHHGSAV----QVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWE 55

Query: 187 DMRRKFGAVWETD--RAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG 240
            + +K G VWE    +   GP  F F    G           +P  + IG TY   
Sbjct: 56  PLTKK-GNVWEVKSSKPLVGPFNFRFMSKGG---MRNVFDEVIPTAFSIGKTYKPE 107

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A Length = 96

 Score = 75.7 bits (186), Expect = 7e-18
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 8/99 (8%)

Query: 144 NLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETD--RA 201
            +   VE+ S N  +LA+ V Y+G    +  V L E+GS   + M +  G VW  D    
Sbjct: 3   KVTFTVEKGS-NEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEP 59

Query: 202 PKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG 240
            +GP  F F   +G         + VP  + IG TY   
Sbjct: 60  LQGPFNFRFLTEKG---MKNVFDDVVPEKYTIGATYAPE 95

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	259
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	100.0
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	100.0
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	100.0
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	99.96
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	99.95
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.95
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	99.92
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.62
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.2
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	98.17
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	98.15
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	98.06
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	98.04
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	97.95
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	97.63
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	93.0

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=100.00  E-value=5.4e-67  Score=466.37  Aligned_cols=222  Identities=31%  Similarity=0.582  Sum_probs=208.0

Q ss_pred             cCCCCceeeEEEEeCCCCCC----CCcccCCCCCCCCCCCCeEEEeChhhhcCCccCCceEEEEEeCCCCcccCCCeEEE
Q 025007           17 ACDHCVHQSKVSYFSKTSAL----SKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVI   92 (259)
Q Consensus        17 ~~~~~~~~g~aT~Y~~~~~~----~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~   92 (259)
                      .|+.+|+.|+||||+++++.    ++|||||++++..+++.++||+|+++|++|++|| +||||+|.+++.|++++|+|+
T Consensus        14 ~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG-~Cy~V~c~~~~~C~~~sv~V~   92 (245)
T 2hcz_X           14 NYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCG-SCYEVRCKEKPECSGNPVTVY   92 (245)
T ss_dssp             CCCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTT-CEEEEECCSSSSBCSSCEEEE
T ss_pred             ccCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcC-CeEEEEeCCCCccCCCCEEEE
Confidence            46788999999999998643    3799999998888899999999999999999999 999999998888999999999


Q ss_pred             EccCCCC--CCCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecCC-ceEEEEEecCCCCCceeEEEEEeecCC
Q 025007           93 VTDLNHN--NKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKH-HNLAVRVEESSKNPNYLAIKVLYQGGK  169 (259)
Q Consensus        93 VtD~Cp~--~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~g-~ni~~~v~~gS~n~~w~av~v~n~gg~  169 (259)
                      |||+||.  ++.|||||+.||.+||++|++++|++.|+|+|+||||+|+++| .||+|++++|| |+||++|+|.|++|.
T Consensus        93 VtD~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs-~~~~~avlv~n~~g~  171 (245)
T 2hcz_X           93 ITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGC-NPNYLAVLVKYVADD  171 (245)
T ss_dssp             EEEECCCTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCC-SSSCCCEEEECCCTT
T ss_pred             EEeccCCCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCC-CcceEEEEEEecCCC
Confidence            9999986  6799999999999999999999999999999999999999983 58999999999 899999999999999


Q ss_pred             cceEEEEEEECCCCCeEEccccCCcEEEeCCC--CCCceEEEEEEEeCCCceEEEEccccCCCCCCCeEEecCccc
Q 025007          170 TEILGVVLSEYGSPVRIDMRRKFGAVWETDRA--PKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAGVQI  243 (259)
Q Consensus       170 ~~I~sVev~~~g~~~W~~m~r~~g~~W~~~~~--~~~pl~~Rvt~t~~~~G~~vv~~~vip~~w~~G~~y~t~~QF  243 (259)
                      ++|++|||++.++..|++|+|+|||+|++++.  +++||+||||  + .+|++|+++||||++|++|++|++.+||
T Consensus       172 g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~gpls~RvT--~-~~G~~v~~~nViP~~w~~g~ty~~~~qf  244 (245)
T 2hcz_X          172 GDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLT--S-ESGKKVIAKDVIPANWRPDAVYTSNVQF  244 (245)
T ss_dssp             CCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCSSCCEEEE--E-TTSCEEEESCSCCSSCCTTCEEECSCCC
T ss_pred             CCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCCCEEEEEE--E-eCCcEEEEeeeecCCCCCCCEEeCcccc
Confidence            99999999998777999999999999999875  6889999999  5 8999999999999999999999999999

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=100.00  E-value=3.2e-66  Score=460.22  Aligned_cols=220  Identities=28%  Similarity=0.575  Sum_probs=200.7

Q ss_pred             hcCCCCceeeEEEEeCCCCCC----CCcccCCCCCCCCCCCCeEEEeChhhhcCCccCCceEEEEEeCCCCcccCCCeEE
Q 025007           16 TACDHCVHQSKVSYFSKTSAL----SKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRV   91 (259)
Q Consensus        16 ~~~~~~~~~g~aT~Y~~~~~~----~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V   91 (259)
                      ..|+.+|+.|+||||+++++.    ++|||||++++..+++.++||+|+++|++|++|| +||||+|.+++.|.+++|+|
T Consensus        13 ~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG-~CyeV~c~~~~~C~~~~v~V   91 (241)
T 1n10_A           13 ATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCG-SCFEIKCTKPEACSGEPVVV   91 (241)
T ss_dssp             CBCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSS-CEEEEEECSSTTBCSCCEEE
T ss_pred             CcccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCC-CeEEEEeCCCCccCCCCEEE
Confidence            357888999999999987643    4799999998888899999999999999999999 99999999877899999999


Q ss_pred             EEccCCCC--CCCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecCC-ceEEEEEecCCCCCceeEEEEEeecC
Q 025007           92 IVTDLNHN--NKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKH-HNLAVRVEESSKNPNYLAIKVLYQGG  168 (259)
Q Consensus        92 ~VtD~Cp~--~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~g-~ni~~~v~~gS~n~~w~av~v~n~gg  168 (259)
                      +|||+|+.  ++.|||||+.||.+||++|++++|++.|+|+|+||||+|+++| .||+|++++|| |+||++|+|.|++|
T Consensus        92 ~VtD~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs-~~~~~~vlv~n~~g  170 (241)
T 1n10_A           92 HITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGS-NPNYLALLVKYVNG  170 (241)
T ss_dssp             EEEEECSSCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTC-BTTEEEEEEECCCC
T ss_pred             EEeEecCCCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCC-CcceEEEEEEecCC
Confidence            99999865  6799999999999999999999999999999999999999984 59999999999 89999999999999


Q ss_pred             CcceEEEEEEECCCCCeEEccccCCcEEEeCCC--CCCceEEEEEEEeCCCceEEEEccccCCCCCCCeEEecC
Q 025007          169 KTEILGVVLSEYGSPVRIDMRRKFGAVWETDRA--PKGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDAG  240 (259)
Q Consensus       169 ~~~I~sVev~~~g~~~W~~m~r~~g~~W~~~~~--~~~pl~~Rvt~t~~~~G~~vv~~~vip~~w~~G~~y~t~  240 (259)
                      .++|++|||++.++..|++|+|+|||+|++++.  +++||+||||  + .+|++|+++||||++|++|++|++.
T Consensus       171 ~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~gpls~RvT--~-~~G~~v~~~nViP~~w~~g~ty~~~  241 (241)
T 1n10_A          171 DGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYT--T-EGGTKTEAEDVIPEGWKADTSYESK  241 (241)
T ss_dssp             SSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSCEEEEEE--E-SSSCEEEEEEEECSSCCSSEEEEC-
T ss_pred             CCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCCCEEEEEE--E-eCCcEEEEccccCCCCCCCCEEeCC
Confidence            999999999998877999999999999999875  7789999999  5 8899999999999999999999873

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=100.00  E-value=3.3e-54  Score=375.94  Aligned_cols=195  Identities=22%  Similarity=0.260  Sum_probs=176.6

Q ss_pred             CceeeEEEEeCCCCCCCCcccCCCCCCCCCCCCeEEEeChhhhcCC----ccCCceEEEEEeCCCCcccCCCeEEEEccC
Q 025007           21 CVHQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNG----AACGGTCFQVRCKNRALCSRKGTRVIVTDL   96 (259)
Q Consensus        21 ~~~~g~aT~Y~~~~~~~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g----~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~   96 (259)
                      +.+.|+||||+++.  .+||||+..   .+++.++||+|+.+|++|    +.|| +||||+|.      +++|+|+|+|+
T Consensus         5 ~~~~G~aT~Y~~g~--~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG-~c~~v~~~------~gsv~V~v~D~   72 (208)
T 3d30_A            5 DLHEGYATYTGSGY--SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAG-SYLEVEGP------KGKTTVYVTDL   72 (208)
T ss_dssp             CCEEEEEEECSTTS--SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTT-CEEEEEET------TEEEEEEEEEE
T ss_pred             CcEEEEEEEcCCCC--CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccC-CEEEEEeC------CCcEEEEEEEC
Confidence            46799999999864  589999864   356789999999999988    7999 99999984      35799999999


Q ss_pred             CCCC-CCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecCCceEEEEEecCCCCCceeEEEEEeecCCcceEEE
Q 025007           97 NHNN-KTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGV  175 (259)
Q Consensus        97 Cp~~-~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~g~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sV  175 (259)
                      ||+| ..|||||+.||.+||.       ++.|+++|+||+|+|+++| +|+|++++|| |+||++|||+|+++  +|++|
T Consensus        73 CP~C~~~~~DLS~~aF~~la~-------~~~G~i~v~~~~V~C~~~G-~i~f~v~~Gs-~~~~~~v~v~n~~g--~v~~v  141 (208)
T 3d30_A           73 YPEGARGALDLSPNAFRKIGN-------MKDGKINIKWRVVKAPITG-NFTYRIKEGS-SRWWAAIQVRNHKY--PVMKM  141 (208)
T ss_dssp             CTTCCTTCEEECHHHHHHHSC-------GGGSSEEEEEEEECCCCCS-CCEEEECTTC-SSSEEEEEEESCSS--CEEEE
T ss_pred             CCCCCCCeEECCHHHHHHhcc-------cCCCEEEEEEEEeCCCCCC-ceeEEEcCCC-CCceEEEEEEecCC--CEEEE
Confidence            9986 5899999999999998       6799999999999999998 9999999999 99999999999965  99999


Q ss_pred             EEEECCCCCeEEccccCCcEEEeCCCCCCceEEEEEEEeCCCceEEEEccccCCCCCC----CeEEecCccccc
Q 025007          176 VLSEYGSPVRIDMRRKFGAVWETDRAPKGPLQFGFPIVQGFDVKWIWAKNPVPADWKI----GVTYDAGVQITD  245 (259)
Q Consensus       176 ev~~~g~~~W~~m~r~~g~~W~~~~~~~~pl~~Rvt~t~~~~G~~vv~~~vip~~w~~----G~~y~t~~QF~~  245 (259)
                      ||+++  ..|++|+|+|+|+|..+..+.+||+||||  + .+|++|  .++||++|+.    +.+|++++||++
T Consensus       142 ~i~~~--~~W~~m~r~~~n~~~~~~~~~~pls~rvT--~-~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf~~  208 (208)
T 3d30_A          142 EYEKD--GKWINMEKMDYNHFVSTNLGTGSLKVRMT--D-IRGKVV--KDTIPKLPESGTSKAYTVPGHVQFPE  208 (208)
T ss_dssp             EEEET--TEEEEEEECTTSCEEEECCCSSSEEEEEE--E-TTCCEE--EEEECCCCSSCCSSCEEEECCCCCCC
T ss_pred             EEecC--CcEEEccccccceeecCCCCCCCEEEEEE--E-CCCCEE--EEEECCCCccCcccceEEeCcCccCC
Confidence            99986  48999999999999887777899999999  6 899999  7899999997    899999999975

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A

Probab=99.96  E-value=1.5e-29  Score=196.30  Aligned_cols=96  Identities=24%  Similarity=0.370  Sum_probs=90.9

Q ss_pred             ceEEEEEecCCCCCceeEEEEEeecCCcceEEEEEEECCCCCeEEccccCCcEEEeCC--CCCCceEEEEEEEeCCCceE
Q 025007          143 HNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDR--APKGPLQFGFPIVQGFDVKW  220 (259)
Q Consensus       143 ~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVev~~~g~~~W~~m~r~~g~~W~~~~--~~~~pl~~Rvt~t~~~~G~~  220 (259)
                      .+|+|+|++|| +|||++|+|.|++|.++|.+||||++++..|++|+| ||++|++++  ++++||+||||  + .+|++
T Consensus         2 ~~i~F~V~~gs-~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~GplSfRvt--~-~~G~~   76 (100)
T 3ft1_A            2 VQVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVGPFNFRFM--S-KGGMR   76 (100)
T ss_dssp             BEEEEEECTTC-BTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCSSEEEEEE--E-TTCCE
T ss_pred             CCEEEEEecCC-CcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCCCEEEEEE--E-cCCcE
Confidence            48999999998 899999999999999999999999988778999999 999999986  68999999999  4 78999


Q ss_pred             EEEccccCCCCCCCeEEecCccc
Q 025007          221 IWAKNPVPADWKIGVTYDAGVQI  243 (259)
Q Consensus       221 vv~~~vip~~w~~G~~y~t~~QF  243 (259)
                      ++++||||++|++|++|++.+||
T Consensus        77 ~v~~nViPa~W~~G~ty~s~vq~   99 (100)
T 3ft1_A           77 NVFDEVIPTAFSIGKTYKPEEQE   99 (100)
T ss_dssp             EEEEEEECTTCCTTCEECCCCBC
T ss_pred             EEECeEeCCCCCCCcEEeccccc
Confidence            99999999999999999999998

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}

Probab=99.95  E-value=2.1e-27  Score=186.24  Aligned_cols=96  Identities=24%  Similarity=0.390  Sum_probs=89.3

Q ss_pred             CCceEEEEEecCCCCCceeEEEEEeecCCcceEEEEEEECCCCCeEEccccCCcEEEeCC--CCCCceEEEEEEEeCCCc
Q 025007          141 KHHNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDR--APKGPLQFGFPIVQGFDV  218 (259)
Q Consensus       141 ~g~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVev~~~g~~~W~~m~r~~g~~W~~~~--~~~~pl~~Rvt~t~~~~G  218 (259)
                      .|.||.|+|+++| +|||++|+|.|++|.++|++||||+.++..|++|+|+ |++|++++  +|++||+||||  + .+|
T Consensus        11 ~g~~v~f~V~~~s-np~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~GplSfRvt--t-s~G   85 (108)
T 2jnz_A           11 SAVQVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVGPFNFRFM--S-KGG   85 (108)
T ss_dssp             CCCEEEEEECTTC-CSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCSSEEEEEE--E-TTT
T ss_pred             CCccEEEEEecCC-CccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCCCEEEEEE--E-cCC
Confidence            3579999999999 8999999999999999999999998666799999999 99999986  78899999999  5 789


Q ss_pred             eEEEEccccCCCCCCCeEEecCc
Q 025007          219 KWIWAKNPVPADWKIGVTYDAGV  241 (259)
Q Consensus       219 ~~vv~~~vip~~w~~G~~y~t~~  241 (259)
                      ++++++||||++|++|++|++.+
T Consensus        86 ~~~va~nViPa~W~~Gqty~s~v  108 (108)
T 2jnz_A           86 MRNVFDEVIPTAFSIGKTYKPEE  108 (108)
T ss_dssp             EEEEEEEEECSSCCTTCEECCCC
T ss_pred             cEEEECeEECCCCCCCCEEeCCC
Confidence            99999999999999999999864

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.95  E-value=9.3e-29  Score=208.17  Aligned_cols=110  Identities=18%  Similarity=0.334  Sum_probs=93.5

Q ss_pred             CceeeEEEEeCCCCCCCCcccCCC-----CCCCCCCCCeEEEeChhhhcCC------ccCCceEEEEEeCCCC------c
Q 025007           21 CVHQSKVSYFSKTSALSKGACGYG-----SLALGLGSGHIAAAVPSIYKNG------AACGGTCFQVRCKNRA------L   83 (259)
Q Consensus        21 ~~~~g~aT~Y~~~~~~~~GaCGyg-----~~~~~~~~~~~aA~s~~~~~~g------~~CG~~C~~V~c~~~~------~   83 (259)
                      .|..++||||+++   ++|||||+     ++.+..++.++||||++||++|      +.|| +||||+|.+.+      +
T Consensus        13 g~~~A~aT~Yg~~---~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG-~Cyel~c~~~~c~~cg~~   88 (181)
T 1wc2_A           13 GKSCASTTNYHDS---HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCG-QCIKLTTTGGYVPGQGGP   88 (181)
T ss_dssp             TEEEEEEEEECCC---BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTT-CEEEEEEEEEECTTSCCC
T ss_pred             CccccceeEecCC---CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCC-CcEEEEcCCCCccccccc
Confidence            3889999999997   68999999     5555567889999999999997      8999 99999997642      2


Q ss_pred             cc-CCCeEEEEccCCCC-------C--------------CCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecC
Q 025007           84 CS-RKGTRVIVTDLNHN-------N--------------KTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYK  141 (259)
Q Consensus        84 C~-~~~v~V~VtD~Cp~-------~--------------~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~  141 (259)
                      |. +++|+|||||.||+       |              +.||||+++| .+||.       ...|+++|+||||+|+..
T Consensus        89 ~~~g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~-------~~~GivpV~yrrV~C~~~  160 (181)
T 1wc2_A           89 VREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTG-------MGWNNPETTWEVVNCDSE  160 (181)
T ss_dssp             CCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGG-------GTCSSEEEEEEEECHHHH
T ss_pred             CCCCCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhh-------hcCCCceeEEEEEeCCCC
Confidence            23 34799999999993       2              5799999999 88987       578999999999999974


Q ss_pred             C
Q 025007          142 H  142 (259)
Q Consensus       142 g  142 (259)
                      +
T Consensus       161 ~  161 (181)
T 1wc2_A          161 H  161 (181)
T ss_dssp             H
T ss_pred             C
Confidence            3

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A

Probab=99.92  E-value=2.2e-27  Score=182.96  Aligned_cols=92  Identities=32%  Similarity=0.462  Sum_probs=84.8

Q ss_pred             ceEEEEEecCCCCCceeEEEEEeecCCcceEEEEEEECCCCCeEEccccCCcEEEeCC--CCCCceEEEEEEEeCCCceE
Q 025007          143 HNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDR--APKGPLQFGFPIVQGFDVKW  220 (259)
Q Consensus       143 ~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVev~~~g~~~W~~m~r~~g~~W~~~~--~~~~pl~~Rvt~t~~~~G~~  220 (259)
                      .+|+|+|++|| ++||++|+|.|++  ++|++||||+.++..|++|+|+||++|++++  ++++||+||||  + .+|++
T Consensus         2 ~~i~F~V~~gs-~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~GplSfRvt--~-~~G~~   75 (96)
T 1bmw_A            2 PKVTFTVEKGS-NEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGPFNFRFL--T-EKGMK   75 (96)
T ss_dssp             CCCCCCCCTTC-SSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCCCCCBCCE--E-TTTEE
T ss_pred             CCEEEEEecCC-CCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCCCEEEEEE--E-cCCcE
Confidence            37999999999 8999999999997  8999999999767799999999999999987  56899999999  5 78999


Q ss_pred             EEEccccCCCCCCCeEEecC
Q 025007          221 IWAKNPVPADWKIGVTYDAG  240 (259)
Q Consensus       221 vv~~~vip~~w~~G~~y~t~  240 (259)
                      ++++||||++|++|++|++.
T Consensus        76 ~v~~nViP~~W~~G~ty~~~   95 (96)
T 1bmw_A           76 NVFDDVVPEKYTIGATYAPE   95 (96)
T ss_dssp             CCBSSCSCSSCCSSSCCCC-
T ss_pred             EEEeeEeCCCCCCCCEEeCC
Confidence            99999999999999999985

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.62  E-value=2e-16  Score=126.60  Aligned_cols=92  Identities=21%  Similarity=0.289  Sum_probs=66.7

Q ss_pred             CcccCCCCCCCCCC---CCeEEEeChhhh-cCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCCCceeeC-HHHHH
Q 025007           38 KGACGYGSLALGLG---SGHIAAAVPSIY-KNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLS-RRAFR  112 (259)
Q Consensus        38 ~GaCGyg~~~~~~~---~~~~aA~s~~~~-~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs-~~AF~  112 (259)
                      .++|+.-+...+..   ...-.|+...+. ++++.|| +|++|++..    ++++|+|+|+|+||.+  +|||| ++||+
T Consensus        28 s~~C~t~da~~~~~~~~~y~wtA~~g~~gp~~g~~CG-~cv~Vtn~~----nGksV~V~VvD~CP~g--gLDLS~~~AF~  100 (125)
T 1bw3_A           28 SAYCATWDASKPLSWRSKYGWTAFCGPAGPRGQAACG-KCLRVTNPA----TGAQITARIVDQCANG--GLDLDWDTVFT  100 (125)
T ss_dssp             CCTTHHHHTTSCHHHHHHSCCEESCSTTCCCSGGGTT-CEEEEEETT----TTEEEEEEEEECCSSS--SCCSCSSSSHH
T ss_pred             eEeeecccCCCceeEecCCCceEeccCCCCCCCcccC-CEEEeEeCC----CCCEEEEEEEEeCCCC--CCCCCCHHHHH
Confidence            48898633222100   001233433334 7788999 999999853    3678999999999984  59999 99999


Q ss_pred             HHHccCCchhhccCceEEEEEEEEeee
Q 025007          113 ALANKGMDNEILKQRAVDVEYIRVPCE  139 (259)
Q Consensus       113 ~ia~~g~~~~l~~~G~v~v~~r~V~C~  139 (259)
                      +|+.+|   +.++.|+++|+|++|+|+
T Consensus       101 ~Ia~~g---~G~~~G~i~V~w~~V~C~  124 (125)
T 1bw3_A          101 KIDTNG---IGYQQGHLNVNYQFVDCR  124 (125)
T ss_dssp             HHCSSC---HHHHHSEEEEEEEEECCC
T ss_pred             HHhccC---CcccCcEEEEEEEEEeCC
Confidence            999743   124689999999999996

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.20  E-value=9.4e-11  Score=89.50  Aligned_cols=92  Identities=18%  Similarity=0.187  Sum_probs=71.4

Q ss_pred             eeeEEEEeCCCCCCCCcccCCCCCCCCCCCCeEEEeChhhhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCC-
Q 025007           23 HQSKVSYFSKTSALSKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNK-  101 (259)
Q Consensus        23 ~~g~aT~Y~~~~~~~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~-  101 (259)
                      ..|.|+||++.-.....|||--..    ...++||-.+      ..|| ...+|+...    ++++|+|+|.|+||..+ 
T Consensus         2 ~~G~ASwYg~~f~G~~TA~Ge~~~----~~~~tAAH~t------lP~g-t~vrVtNl~----nGksVvVrVnDRGP~~~g   66 (95)
T 4avr_A            2 DTGEASYYGSRHAGLRTASGERYN----PNAMTAAHRT------LPFG-ARVRVTNLD----NRRSVVVRINDRGPFRRG   66 (95)
T ss_dssp             EEEEEEECCGGGTTSBCTTSCBCC----TTSCEEECSS------SCTT-CEEEEEETT----TCCEEEEEEEECCCCSTT
T ss_pred             CEEEEEEECCccCCCCCCCccCcC----CCCCEEEcCC------CCCC-cEEEEEECC----CCcEEEEEEccCCCCCCC
Confidence            479999999742114678875431    1346777763      3699 999999654    47899999999999854 


Q ss_pred             CceeeCHHHHHHHHccCCchhhccCceEEEEEEEE
Q 025007          102 TDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRV  136 (259)
Q Consensus       102 ~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V  136 (259)
                      ..+|||+.||++|+.       ++.|+.+|+|+.+
T Consensus        67 riIDLS~aAa~~Lg~-------~~~G~~~V~ve~~   94 (95)
T 4avr_A           67 RIIDVSRKAAEGLGM-------IRSGVAPVRIESL   94 (95)
T ss_dssp             EEEEECHHHHHHHTC-------TTTSCEEEEEEEC
T ss_pred             CEEEeCHHHHHHhCC-------cCCCEEEEEEEEe
Confidence            579999999999997       5789999999876

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=98.17  E-value=5.8e-06  Score=65.42  Aligned_cols=69  Identities=23%  Similarity=0.408  Sum_probs=53.9

Q ss_pred             eEEEeCh-hhhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCCCceeeCHHHHHHHHccCCchhhccCceEEEE
Q 025007           54 HIAAAVP-SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVE  132 (259)
Q Consensus        54 ~~aA~s~-~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~  132 (259)
                      +|.+... .-|+ ...|| .|+||+-.      +++|.|..+|.-+   ..|+|+.+||+.|.+ |+++   ..|+|+++
T Consensus        45 ~IGg~~~i~gwn-s~~CG-tC~~lty~------g~si~vlaID~a~---~Gfnis~~A~n~LT~-G~a~---~lG~V~a~  109 (120)
T 3m3g_A           45 YIGGAAAVAGWN-SASCG-TCWKLQYS------GHTIYVLAVDHAA---SGFNIALDAMNALTG-GQAV---QLGRVSAT  109 (120)
T ss_dssp             SEEEETTCCSTT-CTTTT-CEEEEEET------TEEEEEEEEEECS---SSEEECHHHHHHHHT-SCHH---HHCEEECE
T ss_pred             ccccccccccCC-CCCCC-ceEEEEEC------CeEEEEEEEecCC---CceeecHHHHHHhhC-Ccce---eeeeEeEE
Confidence            5666654 3464 48899 99999963      5789999999874   359999999999985 4433   35999999


Q ss_pred             EEEEe
Q 025007          133 YIRVP  137 (259)
Q Consensus       133 ~r~V~  137 (259)
                      |++|+
T Consensus       110 ~~~V~  114 (120)
T 3m3g_A          110 ATQVP  114 (120)
T ss_dssp             EEEEC
T ss_pred             EEEcC
Confidence            99997

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=98.15  E-value=7.8e-06  Score=64.87  Aligned_cols=71  Identities=25%  Similarity=0.425  Sum_probs=54.9

Q ss_pred             eEEEeCh-hhhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCCCceeeCHHHHHHHHccCCchhhccCceEEEE
Q 025007           54 HIAAAVP-SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVE  132 (259)
Q Consensus        54 ~~aA~s~-~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~  132 (259)
                      +|.+... +-|++ ..|| .|+|++-..    .++++.|..+|.-++.   |+|+.+||+.|.+ |++.   ..|+|+++
T Consensus        45 FIGg~~~V~gwnS-~~CG-tC~~lty~~----~g~si~vlaID~a~~G---fnis~~Amn~LT~-G~a~---~lG~V~a~  111 (122)
T 3sul_A           45 YVGAVDTITGWNS-ESCG-TCYQITWSG----TGKTIHVVGVDVAGNG---FNVGQRAMDDLTN-GQAV---ALGNIDVT  111 (122)
T ss_dssp             EEEEETTCCSTTC-TTTT-CEEEEEETT----TTEEEEEEEEEECSSS---EEECHHHHHHHHT-SCHH---HHSEEEEE
T ss_pred             ccccccccccCCC-CCCC-ceEEEEEcC----CCcEEEEEEEecCCCc---eeehHHHHHHhcC-Ccce---ecceEeEE
Confidence            4666654 44655 9999 999999642    2578999999987554   9999999999986 3332   35999999


Q ss_pred             EEEEe
Q 025007          133 YIRVP  137 (259)
Q Consensus       133 ~r~V~  137 (259)
                      |++|+
T Consensus       112 ~~qV~  116 (122)
T 3sul_A          112 ATLVD  116 (122)
T ss_dssp             EEEEC
T ss_pred             EEEcC
Confidence            99997

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.06  E-value=1.3e-05  Score=63.97  Aligned_cols=74  Identities=20%  Similarity=0.389  Sum_probs=54.1

Q ss_pred             eEEEeCh-hhhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCCCceeeCHHHHHHHHccCCchhhccCceEEEE
Q 025007           54 HIAAAVP-SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVE  132 (259)
Q Consensus        54 ~~aA~s~-~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~  132 (259)
                      +|.+... .-|| ...|| .|+||+-.++.- ..++|.|..+|.-++.   |+|+.+||+.|.+ |++.   ..|+|+++
T Consensus        45 ~IGg~~~i~gwn-s~~CG-tC~~lty~g~~~-~~~si~vlaID~a~~G---fnis~~Amn~LT~-g~a~---~lG~V~~~  114 (127)
T 3suj_A           45 CIGGSSDIAGYN-SPNCG-SCYQLTYSSAHT-TPKSIYMVAIDRSAEG---FTASKQAMDDLTN-KRAE---ELGTVNVD  114 (127)
T ss_dssp             SEEEETTCCSTT-CTTTT-CEEEEEECCSSS-CCEEEEEEEEEECSSS---EEECHHHHHHHHT-SCHH---HHSSEEEE
T ss_pred             eeccccccccCC-CCCCC-ceEEEEECCCCC-cceEEEEEEEecCCCc---eeecHHHHHHhcC-Cccc---cceeEEEE
Confidence            4666553 3464 48899 999999753210 1257888888987554   9999999999986 3332   35899999


Q ss_pred             EEEEe
Q 025007          133 YIRVP  137 (259)
Q Consensus       133 ~r~V~  137 (259)
                      |++|+
T Consensus       115 ~~~V~  119 (127)
T 3suj_A          115 VRKVD  119 (127)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99997

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.04  E-value=1.3e-05  Score=63.86  Aligned_cols=73  Identities=22%  Similarity=0.431  Sum_probs=54.7

Q ss_pred             eEEEeCh-hhhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCCCceeeCHHHHHHHHccCCchhhccCceEEEE
Q 025007           54 HIAAAVP-SIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAVDVE  132 (259)
Q Consensus        54 ~~aA~s~-~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~  132 (259)
                      +|.+... .-||+ ..|| .|+|++-.++.  ..+++.|..+|.-++   .|+|+.+||+.|.+ |++.   ..|+|+++
T Consensus        46 ~IGg~~~i~gwnS-~~CG-tC~~lty~g~~--~~~si~vlaID~a~~---Gfnis~~Amn~LT~-G~a~---~lG~V~~~  114 (125)
T 3suk_A           46 HIGASSDIGGFNS-PACG-NCYTISFTFQG--VTRSINLVAIDHAGN---GFNVAQAAMDELTN-GNAV---ALGTIDVQ  114 (125)
T ss_dssp             SEEEETTCCSTTC-TTTT-CEEEEEEEETT--EEEEEEEEEEEECSS---SEEECHHHHHHHHT-SCHH---HHCEEEEE
T ss_pred             eeccccccccCCC-CCCC-eeEEEEEcCCC--cceEEEEEEEecCCC---ceeecHHHHHHhcC-Cccc---ccceEeEE
Confidence            5666654 34654 8899 99999964321  126788888998754   49999999999987 3333   35999999


Q ss_pred             EEEEe
Q 025007          133 YIRVP  137 (259)
Q Consensus       133 ~r~V~  137 (259)
                      |++|+
T Consensus       115 ~~~V~  119 (125)
T 3suk_A          115 SQQVA  119 (125)
T ss_dssp             EEEEC
T ss_pred             EEEcC
Confidence            99997

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=97.95  E-value=1.7e-05  Score=63.31  Aligned_cols=68  Identities=19%  Similarity=0.379  Sum_probs=55.8

Q ss_pred             eEEEeChh-hhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCCCceeeCHHHHHHHHccCCchhhccCceE-EE
Q 025007           54 HIAAAVPS-IYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGMDNEILKQRAV-DV  131 (259)
Q Consensus        54 ~~aA~s~~-~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v-~v  131 (259)
                      +|.+.... -|+ ...|| .|++|+-.     +++++.|+.+|.-++   .|+++.+||+.|.+.      ...|+| ++
T Consensus        51 ~IGga~~iagWN-S~~CG-tC~~lty~-----ng~sI~vlaID~A~~---gFnIs~~Amn~LT~G------~~lG~V~~a  114 (129)
T 2kqa_A           51 NVGGIPDIAGWD-SPSCG-TCWKVTIP-----NGNSIFIRGVDSGRG---GFNVNPTAFTKLVGS------TEAGRVDNV  114 (129)
T ss_dssp             SEEEETTCCSTT-CTTCS-CEEEEEET-----TTEEEEEEEEEECSS---SEEECHHHHHHHHSS------SSSCCBCSC
T ss_pred             eeccchhhccCC-CCCCC-ceEEEEEc-----CCCEEEEEEEccCCC---ceeehHHHHHHhcCC------cccCcEeEE
Confidence            56666654 466 79999 99999963     267899999998774   699999999999983      357999 99


Q ss_pred             EEEEEe
Q 025007          132 EYIRVP  137 (259)
Q Consensus       132 ~~r~V~  137 (259)
                      +|++|+
T Consensus       115 ~~~qV~  120 (129)
T 2kqa_A          115 NYVQVD  120 (129)
T ss_dssp             EEEECC
T ss_pred             EEEEcC
Confidence            999997

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=97.63  E-value=0.00018  Score=57.79  Aligned_cols=71  Identities=21%  Similarity=0.241  Sum_probs=53.3

Q ss_pred             eEEEeChhhhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCCCceeeCHHHHHHHHccCC-chhhccCceEEE-
Q 025007           54 HIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLSRRAFRALANKGM-DNEILKQRAVDV-  131 (259)
Q Consensus        54 ~~aA~s~~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~g~-~~~l~~~G~v~v-  131 (259)
                      +|.|..   | |...|| .|++|+-.      +++|.|..+|.-.+. .-|||+.+||+.|.+ |+ +.+-...|+|++ 
T Consensus        49 ~igg~~---w-ns~~CG-tCwkLtY~------G~sI~vlaID~a~~g-~~FnIs~~Amn~LT~-G~~a~~a~elG~Vda~  115 (136)
T 3sum_A           49 HFVAAP---E-AQTECG-SCWKLRYK------GNHAFVTVVDRVEEA-NLFVGGTDLVKNLTT-FNGAPEGYDWGTAQLF  115 (136)
T ss_dssp             SEEECC---B-TTBCTT-CEEEEEET------TEEEEEEEEECCCST-TEEEECHHHHHHHTC-BTTBCHHHHHSEEECS
T ss_pred             cccccc---c-CCCCCC-ceEEEEEC------CeEEEEEEEecCCCc-ceEeehHHHHHHHhC-CCccccceecceeeee
Confidence            566665   5 558999 99999963      578999999987432 139999999999986 22 111135699999 


Q ss_pred             EEEEEe
Q 025007          132 EYIRVP  137 (259)
Q Consensus       132 ~~r~V~  137 (259)
                      +|++|+
T Consensus       116 ~~~qVd  121 (136)
T 3sum_A          116 SAYQVD  121 (136)
T ss_dssp             EEEEEC
T ss_pred             EEEEcC
Confidence            999997

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=93.00  E-value=0.051  Score=46.47  Aligned_cols=48  Identities=17%  Similarity=0.258  Sum_probs=33.1

Q ss_pred             EEEeChhhhcCC---ccCCceEEEEEeCCCCcccCCCeEEEEccCCCC-CCCceeeC
Q 025007           55 IAAAVPSIYKNG---AACGGTCFQVRCKNRALCSRKGTRVIVTDLNHN-NKTDMVLS  107 (259)
Q Consensus        55 ~aA~s~~~~~~g---~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~~~~DLs  107 (259)
                      +||.+   +.++   ..|+ +||+++=++. ...+|..+|+||+...+ ..+||||.
T Consensus        72 FaA~~---~~g~~e~~~Cc-~C~~LtFt~~-~~~GKkmiVQ~TNtG~Dl~~n~FDl~  123 (210)
T 2eng_A           72 FAATS---IAGSNEAGWCC-ACYELTFTSG-PVAGKKMVVQSTSTGGDLGSNHFDLN  123 (210)
T ss_dssp             EEEEE---CTTCCHHHHTT-CEEEEEECSG-GGTTCEEEEEEEEC-----CCEEEEE
T ss_pred             eeeee---ccCCccccccc-eeEEEEEcCC-CcCCCEEEEEEecccCCCCCCceeEe
Confidence            56665   3232   5699 9999997653 24678899999999976 67899984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	259
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	4e-25
d1n10a1	95	b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {T	8e-21
d1whoa_	94	b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum praten	2e-18
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	2e-07

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 94.7 bits (235), Expect = 4e-25
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 39  GACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNH 98
           GACGY  +     SG        I+K+G  CG  CF+++C     CS +   V +TD N 
Sbjct: 38  GACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGS-CFEIKCTKPEACSGEPVVVHITDDNE 96

Query: 99  N--NKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYK 141
                    LS  AF A+A KG + ++     +++++ RV C+Y 
Sbjct: 97  EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYP 141

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 95

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 82.1 bits (203), Expect = 8e-21
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 144 NLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAP- 202
            +   VE+ S NPNYLA+ V Y  G  +++ V + E G    I+++  +GA+W  D    
Sbjct: 2   KVTFHVEKGS-NPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDK 60

Query: 203 -KGPLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTYDA 239
             GP    +    G       A++ +P  WK   +Y++
Sbjct: 61  LTGPFTVRYTTEGG---TKTEAEDVIPEGWKADTSYES 95

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 94

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 76.0 bits (187), Expect = 2e-18
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 145 LAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRAPKG 204
           +   VE+ S N  +LA+ V Y+G    +  V L E+GS   + M +  G VW  D     
Sbjct: 4   VTFTVEKGS-NEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPL 60

Query: 205 PLQFGFPIVQGFDVKWIWAKNPVPADWKIGVTY 237
              F F  +           + VP  + IG TY
Sbjct: 61  QGPFNFRFLTE-KGMKNVFDDVVPEKYTIGATY 92

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 32/137 (23%)

Query: 37  SKGACGYGSLA----LGLGSGH-IAAAVPSIYKN------GAACGGTCFQVRCKNRALCS 85
            KGACG G  +     G  +G  +AAA    + +      G  CG  C ++      +  
Sbjct: 26  HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCG-QCIKLTTTGGYVPG 84

Query: 86  RKGT-------RVIVTDL---NHNNKTDMVLSRRAFRALANK--------GMDNEILKQR 127
           + G          ++T+L    + N+       +                   +++    
Sbjct: 85  QGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGRSQVTGMG 144

Query: 128 A--VDVEYIRVPCEYKH 142
               +  +  V C+ +H
Sbjct: 145 WNNPETTWEVVNCDSEH 161

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	259
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	100.0
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.96
d1n10a1	95	PHL P 1 C-terminal domain {Timothy grass (Phleum p	99.96
d1whoa_	94	PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 1	99.94
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.35
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	90.45

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=100.00  E-value=3.6e-38  Score=257.95  Aligned_cols=125  Identities=28%  Similarity=0.562  Sum_probs=111.0

Q ss_pred             cCCCCceeeEEEEeCCCCCC----CCcccCCCCCCCCCCCCeEEEeChhhhcCCccCCceEEEEEeCCCCcccCCCeEEE
Q 025007           17 ACDHCVHQSKVSYFSKTSAL----SKGACGYGSLALGLGSGHIAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVI   92 (259)
Q Consensus        17 ~~~~~~~~g~aT~Y~~~~~~----~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~   92 (259)
                      .-.++|++|+||||+++++.    .+|||||++++..+++.++||+|+.+|++|..|| +||||+|.+++.|.+++|+|+
T Consensus        12 ~~~~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG-~cyev~c~~~~~c~~~sv~V~   90 (143)
T d1n10a2          12 TYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCG-SCFEIKCTKPEACSGEPVVVH   90 (143)
T ss_dssp             BCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSS-CEEEEEECSSTTBCSCCEEEE
T ss_pred             ccCCCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCC-cceEeEcCCCCcccCCCEEEE
Confidence            44678999999999987643    4699999998888899999999999999999999 999999999999999999999


Q ss_pred             EccCCCC--CCCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecCC
Q 025007           93 VTDLNHN--NKTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYKH  142 (259)
Q Consensus        93 VtD~Cp~--~~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~g  142 (259)
                      |||.||.  +..|||||++||.+||+++++.+|++.|+|+|+||||+|.++|
T Consensus        91 vtd~c~~~~~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV~C~~~g  142 (143)
T d1n10a2          91 ITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPE  142 (143)
T ss_dssp             EEEECSSCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCT
T ss_pred             EEecccCCCCCccccCCHHHHhhhccccchhhheecCccceEEEEEeccCCC
Confidence            9999986  4679999999999999988877888999999999999999986

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.96  E-value=2.3e-32  Score=229.50  Aligned_cols=122  Identities=20%  Similarity=0.364  Sum_probs=100.5

Q ss_pred             CceeeEEEEeCCCCCCCCcccCCCCCCCC-----CCCCeEEEeChhhhcC------CccCCceEEEEEeCCCCcc-----
Q 025007           21 CVHQSKVSYFSKTSALSKGACGYGSLALG-----LGSGHIAAAVPSIYKN------GAACGGTCFQVRCKNRALC-----   84 (259)
Q Consensus        21 ~~~~g~aT~Y~~~~~~~~GaCGyg~~~~~-----~~~~~~aA~s~~~~~~------g~~CG~~C~~V~c~~~~~C-----   84 (259)
                      .|+.+++|||+++   .+|||||+++...     .++.++||+|++||++      |++|| +||||+|.+...|     
T Consensus        13 g~~~A~aT~Ygd~---~~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG-~CyeV~C~~~~~~~~~~~   88 (180)
T d1wc2a1          13 GKSCASTTNYHDS---HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCG-QCIKLTTTGGYVPGQGGP   88 (180)
T ss_dssp             TEEEEEEEEECCC---BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTT-CEEEEEEEEEECTTSCCC
T ss_pred             CccccceEEeCCC---CCCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccC-CEEEEEECCCCCCccCCC
Confidence            4999999999987   5899999997432     2467999999999999      89999 9999999864332     


Q ss_pred             --cCCCeEEEEccCCCC-------C--------------CCceeeCHHHHHHHHccCCchhhccCceEEEEEEEEeeecC
Q 025007           85 --SRKGTRVIVTDLNHN-------N--------------KTDMVLSRRAFRALANKGMDNEILKQRAVDVEYIRVPCEYK  141 (259)
Q Consensus        85 --~~~~v~V~VtD~Cp~-------~--------------~~~~DLs~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~~~  141 (259)
                        .+++|+|||||+||.       |              +.||||+ +||.+||.       ...|+|+|+||||+|+..
T Consensus        89 ~~~g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia~-------~~~G~v~V~yrrV~C~~~  160 (180)
T d1wc2a1          89 VREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVTG-------MGWNNPETTWEVVNCDSE  160 (180)
T ss_dssp             CCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTGG-------GTCSSEEEEEEEECHHHH
T ss_pred             CCCCCcEEEEEEecCCCCCCCCCccCCccccccccccCcccceech-HHHHHHhh-------hcCCcceeEEEEeeCCCc
Confidence              245799999999994       1              1299997 59999998       678999999999999998


Q ss_pred             CceEEEEEecCCCCCce
Q 025007          142 HHNLAVRVEESSKNPNY  158 (259)
Q Consensus       142 g~ni~~~v~~gS~n~~w  158 (259)
                      + ++++++.  + |++|
T Consensus       161 g-~~~~~~~--~-n~~~  173 (180)
T d1wc2a1         161 H-NHDHRTP--S-NSMY  173 (180)
T ss_dssp             H-HHCTTSC--C-HHHH
T ss_pred             c-ccccccc--C-Ccch
Confidence            7 7776655  2 5565

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.96  E-value=1.6e-29  Score=192.84  Aligned_cols=93  Identities=29%  Similarity=0.606  Sum_probs=86.9

Q ss_pred             ceEEEEEecCCCCCceeEEEEEeecCCcceEEEEEEECCCCCeEEccccCCcEEEeCCC--CCCceEEEEEEEeCCCceE
Q 025007          143 HNLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDRA--PKGPLQFGFPIVQGFDVKW  220 (259)
Q Consensus       143 ~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVev~~~g~~~W~~m~r~~g~~W~~~~~--~~~pl~~Rvt~t~~~~G~~  220 (259)
                      ++|+|+|++|| |||||+|+|.|++|.++|.+|||++.++..|++|+|+|||+|+++++  +++||+||||  + .+|++
T Consensus         1 t~i~F~v~~gs-np~~lav~v~n~~g~gdI~~vevk~~g~~~W~~m~r~~ga~W~~~~~~~~~gpls~Rvt--~-~~G~~   76 (95)
T d1n10a1           1 TKVTFHVEKGS-NPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYT--T-EGGTK   76 (95)
T ss_dssp             CCCEEEECTTC-BTTEEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSCEEEEEE--E-SSSCE
T ss_pred             CcEEEEECCCC-CcceEEEEEEEcCCCCcEEEEEEEeCCCCcceEEEECCCCeEEECCCCCCCcCEEEEEE--E-cCCCE
Confidence            37999999999 89999999999999999999999999888999999999999998753  5789999999  5 89999


Q ss_pred             EEEccccCCCCCCCeEEec
Q 025007          221 IWAKNPVPADWKIGVTYDA  239 (259)
Q Consensus       221 vv~~~vip~~w~~G~~y~t  239 (259)
                      ++++||||++|++|++|++
T Consensus        77 ~v~~nViP~~W~~G~tY~s   95 (95)
T d1n10a1          77 TEAEDVIPEGWKADTSYES   95 (95)
T ss_dssp             EEEEEEECSSCCSSEEEEC
T ss_pred             EEECceECCCCCCCCEEeC
Confidence            9999999999999999986

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.94  E-value=9.6e-27  Score=177.07  Aligned_cols=89  Identities=33%  Similarity=0.484  Sum_probs=82.5

Q ss_pred             eEEEEEecCCCCCceeEEEEEeecCCcceEEEEEEECCCCCeEEccccCCcEEEeCC--CCCCceEEEEEEEeCCCceEE
Q 025007          144 NLAVRVEESSKNPNYLAIKVLYQGGKTEILGVVLSEYGSPVRIDMRRKFGAVWETDR--APKGPLQFGFPIVQGFDVKWI  221 (259)
Q Consensus       144 ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVev~~~g~~~W~~m~r~~g~~W~~~~--~~~~pl~~Rvt~t~~~~G~~v  221 (259)
                      .|+|+|++|| |||||+|+|.|++|  +|.+|||++.++.+|++|+|+|||+|+++.  ++++||+||||  + .+|+++
T Consensus         3 ~v~f~v~~GS-np~~lav~v~~~gg--~i~~vev~~~gs~~W~~M~r~wGa~W~~~~~~~~~gplsfRvt--~-~~G~~~   76 (94)
T d1whoa_           3 KVTFTVEKGS-NEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGPFNFRFL--T-EKGMKN   76 (94)
T ss_dssp             SEEEEECTTC-BTTEEEEEEEETTC--CEEEEEEECTTCCCCEECEECSTTEEEEECSSCCCSSEEEEEE--E-TTSCEE
T ss_pred             cEEEEECCCC-CccEEEEEEEEcCC--CEEEEEEEECCCCceeECccCcCccEEECCCCCCCccEEEEEE--E-cCCCEE
Confidence            6999999999 89999999999975  899999999888899999999999998875  35789999999  5 899999


Q ss_pred             EEccccCCCCCCCeEEe
Q 025007          222 WAKNPVPADWKIGVTYD  238 (259)
Q Consensus       222 v~~~vip~~w~~G~~y~  238 (259)
                      +++||||++|++|++|+
T Consensus        77 v~~nViP~~W~~G~ty~   93 (94)
T d1whoa_          77 VFDDVVPEKYTIGATYA   93 (94)
T ss_dssp             EEEEEECSSCCTTCEEC
T ss_pred             EEcceECCCCCCCCEEC
Confidence            99999999999999996

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.35  E-value=1.3e-07  Score=71.72  Aligned_cols=63  Identities=25%  Similarity=0.497  Sum_probs=51.4

Q ss_pred             ccCCceEEEEEeCCCCcccCCCeEEEEccCCCCCCCceeeC-HHHHHHHHccCCchhhccCceEEEEEEEEeee
Q 025007           67 AACGGTCFQVRCKNRALCSRKGTRVIVTDLNHNNKTDMVLS-RRAFRALANKGMDNEILKQRAVDVEYIRVPCE  139 (259)
Q Consensus        67 ~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs-~~AF~~ia~~g~~~~l~~~G~v~v~~r~V~C~  139 (259)
                      ..|| +|++|+-+.    ++.+++++|+|+|...  .|||. +..|.+|-..|++   ...|.+.|.|++|.|.
T Consensus        61 ~sCG-kclrvTN~a----tga~~~~RiVDqCsng--GlDLD~~~vFn~iDtdG~G---~~~Ghl~V~y~fV~C~  124 (125)
T d1bw3a_          61 AACG-KCLRVTNPA----TGAQITARIVDQCANG--GLDLDWDTVFTKIDTNGIG---YQQGHLNVNYQFVDCR  124 (125)
T ss_dssp             GGTT-CEEEEEETT----TTEEEEEEEEECCSSS--SCCSCSSSSHHHHCSSCHH---HHHSEEEEEEEEECCC
T ss_pred             cccc-ceEEeeecc----cCcEEEEEEeecccCC--CCccccHhhhheecCCCcc---cccccEEEEEEEecCC
Confidence            5799 999999543    3567999999999874  88998 6799999754432   4579999999999995

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=90.45  E-value=0.068  Score=43.60  Aligned_cols=51  Identities=16%  Similarity=0.225  Sum_probs=32.1

Q ss_pred             EEEeChhhhcCCccCCceEEEEEeCCCCcccCCCeEEEEccCCCC-CCCceeeC
Q 025007           55 IAAAVPSIYKNGAACGGTCFQVRCKNRALCSRKGTRVIVTDLNHN-NKTDMVLS  107 (259)
Q Consensus        55 ~aA~s~~~~~~g~~CG~~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~~~~DLs  107 (259)
                      +||.+-.-...+..|. +|||++=++.+ =.+|..+|+||+.--+ ..+||||.
T Consensus        72 fAA~~~~g~~e~~~Cc-~Cy~LtFTs~~-~~GKkMiVQ~tNTGgDlg~n~FDl~  123 (210)
T d2enga_          72 FAATSIAGSNEAGWCC-ACYELTFTSGP-VAGKKMVVQSTSTGGDLGSNHFDLN  123 (210)
T ss_dssp             EEEEECTTCCHHHHTT-CEEEEEECSGG-GTTCEEEEEEEEC-----CCEEEEE
T ss_pred             eeeeeecCCCcccccc-ccEEEEeecCC-cCCCEEEEEEeccCCccCCCeeeEe
Confidence            5565432222235699 99999976422 2467899999988665 67899984