Citrus Sinensis ID: 025042

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI
Secondary Structure (PSIPRED)
ccccccccccccccHHHccccccccccHHHHHHHHccccccccccccccccccccccccHHHHccccccccccHHHHHHHccccEEEEEcccccHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHccccccccHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccccccEEccEEEEEcccEEEccccccccccccHHHHHHHHHHHHcccccEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHcccccccEEcccEEccccccccccccHcccccccEEEcccccccccccccccHHHHHHHHHHHcccccHHccHHHHccccEEEEcHHHHHEcccHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHcccccccHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHcccHHHEEEEEEEEEEccEEEEEEccccccccccHHHHHHHHHHHccccEEEEEccccccccccEEc
Coil and Loop (DISEMBL)
meglvrsqispigahykqqhsvfipKFSLKLRTNLCRArvgmmkhsksfnsvaasvqpleasalgrsentlpskEVLQLWRTADavcfdvdstvcvDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFlekrpprlspgIDELVKKLKANnknvylisggfrhminpiasvlgippenifANQLLFkssgeflgfdaneptsrsggkAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI
Flexible Loop (DISEMBL)
meglvrsqispigahykqqhsvfiPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEasalgrsentlpSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDflekrpprlspGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI
Low Complexity Region (SEG)
MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDElvkklkannknvYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI
Disordered region (IsUnstruct)
***********IGAHYKQQHSVFIPKFSLKLRTNLCRARVGMM*******************************EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL*****************IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFD*************AVQQIRKAHAYKVLAMIGDGATDLEVSI**
Disordered Region (DISOPRED)
******SQISPIGAHYKQ***************************************PL*ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI
Disordered Region (DISEMBL)
MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN**************QIRKAHAYKVLAMIGDGATDLEVSIFI
Disordered Region (DISPRO)
*****RSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	259	2.2.26 [Sep-21-2011]
O82796	295	Phosphoserine phosphatase	yes	no	0.980	0.861	0.716	1e-103
Q5RB83	225	Phosphoserine phosphatase	yes	no	0.694	0.8	0.533	7e-52
P78330	225	Phosphoserine phosphatase	yes	no	0.694	0.8	0.533	7e-52
Q2KHU0	225	Phosphoserine phosphatase	yes	no	0.694	0.8	0.533	9e-52
Q99LS3	225	Phosphoserine phosphatase	yes	no	0.694	0.8	0.533	1e-51
Q5M819	225	Phosphoserine phosphatase	yes	no	0.694	0.8	0.533	2e-51
Q9VSY6	270	Phosphoserine phosphatase	yes	no	0.683	0.655	0.528	1e-49
O28142	344	Phosphoserine phosphatase	yes	no	0.625	0.470	0.335	3e-14
Q58989	211	Phosphoserine phosphatase	yes	no	0.637	0.781	0.323	4e-14
O74382	298	Probable phosphoserine ph	yes	no	0.675	0.587	0.321	2e-11

>sp|O82796|SERB_ARATH Phosphoserine phosphatase, chloroplastic OS=Arabidopsis thaliana GN=PSP PE=1 SV=2

 Score =  374 bits (960), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/254 (71%), Positives = 206/254 (81%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           ME L  S++ P+    ++  S+F     L+LR   CR  V +M H K    V ASVQP E
Sbjct: 1   MEALTTSRVVPVQVPCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPHE 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
            S LG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA
Sbjct: 61  LSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPGI+ELVKKL+ANN +VYLISGG
Sbjct: 121 MGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGG 180

Query: 181 FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY 240
           FR MINP+AS+LGIP ENIFAN LLF +SGEFLGFD NEPTSRSGGKA AVQQIRK   Y
Sbjct: 181 FRQMINPVASILGIPRENIFANNLLFGNSGEFLGFDENEPTSRSGGKAKAVQQIRKGRLY 240

Query: 241 KVLAMIGDGATDLE 254
           K +AMIGDGATDLE
Sbjct: 241 KTMAMIGDGATDLE 254

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates. May be required preferentially for serine biosynthesis in non-photosynthetic tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 3

>sp|Q5RB83|SERB_PONAB Phosphoserine phosphatase OS=Pongo abelii GN=PSPH PE=2 SV=1

 Score =  204 bits (518), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 131/180 (72%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct: 6   ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194
           L+L +PS  QVQ  + ++PP L+PGI ELV +L+  N  V+LISGGFR ++  +AS L I
Sbjct: 66  LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query: 195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
           P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct: 126 PATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDME 185

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|P78330|SERB_HUMAN Phosphoserine phosphatase OS=Homo sapiens GN=PSPH PE=1 SV=2

 Score =  204 bits (518), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 131/180 (72%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct: 6   ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194
           L+L +PS  QVQ  + ++PP L+PGI ELV +L+  N  V+LISGGFR ++  +AS L I
Sbjct: 66  LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query: 195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
           P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct: 126 PATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDME 185

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|Q2KHU0|SERB_BOVIN Phosphoserine phosphatase OS=Bos taurus GN=PSPH PE=2 SV=1

 Score =  203 bits (517), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 130/180 (72%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+  L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T +AMGG+VPF+ AL  R
Sbjct: 6   ELRNLFCSADAVCFDVDSTVIQEEGIDELAKFCGVEDAVSEMTRQAMGGAVPFKAALTQR 65

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194
           L+L +PS  QVQ  L + PP L+PGI ELV +L+  N  V+LISGGFR ++  +AS L I
Sbjct: 66  LALIQPSREQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query: 195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
           P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + M+GDGATD+E
Sbjct: 126 PSTNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIVMVGDGATDME 185

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|Q99LS3|SERB_MOUSE Phosphoserine phosphatase OS=Mus musculus GN=Psph PE=1 SV=1

 Score =  203 bits (516), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 132/180 (73%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  R
Sbjct: 6   ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTQR 65

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194
           L+L +PS  QVQ  L + PP L+PGI ELV +L+  N  V+LISGGFR ++  +A+ L I
Sbjct: 66  LALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVAAKLNI 125

Query: 195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
           P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct: 126 PTTNVFANRLKFYFNGEYAGFDEMQPTAESGGKGKVIRFLKEKFHFKKIIMIGDGATDME 185

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|Q5M819|SERB_RAT Phosphoserine phosphatase OS=Rattus norvegicus GN=Psph PE=2 SV=1

 Score =  202 bits (515), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 131/180 (72%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  R
Sbjct: 6   ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTER 65

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194
           L+L +PS  QVQ  L + PP L+PGI ELV +L+  N  V+LISGGFR ++  +A+ L I
Sbjct: 66  LALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVAAKLNI 125

Query: 195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
           P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   +  +++   +K + MIGDGATD+E
Sbjct: 126 PTTNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIGFLKEKFHFKKIIMIGDGATDME 185

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|Q9VSY6|SERB_DROME Phosphoserine phosphatase OS=Drosophila melanogaster GN=aay PE=2 SV=1

 Score =  196 bits (499), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 94/178 (52%), Positives = 128/178 (71%), Gaps = 1/178 (0%)

Query: 78  QLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL 137
           ++ + +  VCFDVDSTV  +EGIDELAE+CG G  VA  T  AMGG++ F++AL  RL++
Sbjct: 56  KVIQQSQIVCFDVDSTVICEEGIDELAEYCGKGSEVARVTKEAMGGAMTFQDALKIRLNI 115

Query: 138 FKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPE 197
            +P+  QV+DF+++RP  LS  +   V  LKA  K VYLISGGF  +I P+A+ LGIP +
Sbjct: 116 IRPTQQQVRDFIQERPSTLSKNVKRFVSHLKAEGKQVYLISGGFDCLIAPVANELGIPLK 175

Query: 198 NIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYK-VLAMIGDGATDLE 254
           N++AN++LF   GE+  FD N+PTSRSGGKA A+  IRK ++   ++ MIGDGATDLE
Sbjct: 176 NVYANKMLFDYLGEYDSFDINQPTSRSGGKAEAIALIRKENSDDSLITMIGDGATDLE 233

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|O28142|SERB_ARCFU Phosphoserine phosphatase OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2138 PE=3 SV=1

 Score = 79.0 bits (193), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 17/179 (9%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP 140
           R    + FD+DST+   E IDELA+  G G  V++ T RAM G + F+EAL  R+ L K 
Sbjct: 127 REKRLIVFDMDSTLVEAEIIDELAKEAGVGDEVSKLTERAMRGEIGFKEALEERVRLLKG 186

Query: 141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIF 200
              +V + +  R  +L+ G  ELV+ LK     V ++SGGF +  + +   LG+  +  F
Sbjct: 187 LPVEVLERIYSR-IKLTEGAKELVRSLKEAGYKVAVVSGGFSYFTDRLKEELGL--DYAF 243

Query: 201 ANQLLFKS---SGEFLG--FDANEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATD 252
            N+L  ++   +G   G   DA+E       KA  V++I +      + +  +GDGA D
Sbjct: 244 GNELEIENGRLTGRIKGRIIDASE-------KARIVEEIARKEGISPENVVAVGDGAND 295

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|Q58989|SERB_METJA Phosphoserine phosphatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1594 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 11/176 (6%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
           + FD DST+  +E IDE+A   G  + V + T  AM G + FE++L  R+SL K   + +
Sbjct: 8   ILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEK 67

Query: 145 VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQL 204
           V+  +++  P  + G +E +K+LK     V ++SGGF   +N I   LG+  +  FAN+L
Sbjct: 68  VEKAIKRITP--TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRL 123

Query: 205 LFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKV--LAMIGDGATDLEVSIF 258
           + K  G+  G D      +   K   +++I K     +     +GDGA D  +S+F
Sbjct: 124 IVK-DGKLTG-DVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAND--ISMF 175

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|O74382|SERB_SCHPO Probable phosphoserine phosphatase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.07c PE=2 SV=1

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 15/190 (7%)

Query: 67  SENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVP 126
           SE T  +K+ L        V FD+DST+   E IDELA   G  K VA  T+ AM G + 
Sbjct: 68  SEATFSTKKKL--------VVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEID 119

Query: 127 FEEALAARLSLFKP-SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185
           F+E+L  R+SL +  S+  +   + K     +PG  +L   LK     + + SGGF  M 
Sbjct: 120 FQESLRRRVSLLQGLSVDVINKVIGK--ITFTPGAKQLCHCLKQMGATLVVASGGFVPMA 177

Query: 186 NPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAM 245
             +   L +  +  +AN L F   G+FL             KA+ +++ R+      L  
Sbjct: 178 EYVKGQLDL--DYAYANVLEFSDDGKFLTGKVQGAIVDGQRKASILREKREELGLNKLET 235

Query: 246 --IGDGATDL 253
             +GDGA DL
Sbjct: 236 MAVGDGANDL 245

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	259
225457217	294	PREDICTED: phosphoserine phosphatase, ch	0.972	0.857	0.796	1e-112
224121470	295	predicted protein [Populus trichocarpa]	0.980	0.861	0.771	1e-111
255547199	295	phosphoserine phosphatase, putative [Ric	0.980	0.861	0.751	1e-108
42571535	295	phosphoserine phosphatase [Arabidopsis t	0.980	0.861	0.716	1e-101
3759177	295	3-phosphoserine phosphatase [Arabidopsis	0.980	0.861	0.716	1e-101
297850248	295	3-phosphoserine phosphatase [Arabidopsis	0.980	0.861	0.713	1e-101
449440850	295	PREDICTED: phosphoserine phosphatase, ch	0.980	0.861	0.708	1e-101
356508496	294	PREDICTED: phosphoserine phosphatase, ch	0.969	0.853	0.722	6e-99
356516867	295	PREDICTED: phosphoserine phosphatase, ch	0.969	0.850	0.719	3e-97
336441831	296	phosphoserine phosphatase [Brassica junc	0.980	0.858	0.682	2e-94

>gi|225457217|ref|XP_002284065.1| PREDICTED: phosphoserine phosphatase, chloroplastic [Vitis vinifera] gi|297733874|emb|CBI15121.3| unnamed protein product [Vitis vinifera]

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/255 (79%), Positives = 217/255 (85%), Gaps = 3/255 (1%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKF-SLKLRTNLCRARVGMMKHSKSFNSVAASVQPL 59
           MEGL+R + +PI  H  + HS  +P F +L+L     R   GMMKH KSFNSV ASVQPL
Sbjct: 1   MEGLMRVRTNPIHLHCGRHHSPSLPAFPTLQLHKKFYRNSFGMMKHPKSFNSVVASVQPL 60

Query: 60  EASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 119
           EAS   R +NTLPSKE+L+LW+ ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR
Sbjct: 61  EAST--RFDNTLPSKEILELWQDADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 118

Query: 120 AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISG 179
           AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPR+SPGID LVKKLKA N NVYLISG
Sbjct: 119 AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRISPGIDVLVKKLKARNTNVYLISG 178

Query: 180 GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA 239
           GFR MINP+AS+L IPPENIFANQLLF SSGEFLGFDANEPTSRSGGKA AV QIRK H 
Sbjct: 179 GFRQMINPVASILEIPPENIFANQLLFGSSGEFLGFDANEPTSRSGGKATAVMQIRKVHG 238

Query: 240 YKVLAMIGDGATDLE 254
           YK L MIGDGATDLE
Sbjct: 239 YKRLVMIGDGATDLE 253

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121470|ref|XP_002318590.1| predicted protein [Populus trichocarpa] gi|118484409|gb|ABK94081.1| unknown [Populus trichocarpa] gi|222859263|gb|EEE96810.1| predicted protein [Populus trichocarpa]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/254 (77%), Positives = 216/254 (85%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           MEGLV  +I+PI A  +Q HS  +P FSL L  N  +  V  MK  +SFNSV ASVQPL+
Sbjct: 1   MEGLVHYRINPIHATRRQYHSCLVPAFSLLLSKNFTKTPVLFMKGHRSFNSVVASVQPLD 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
           AS LG  +NTLPSK +LQLWR+ADAVCFDVDSTVC+DEGIDELAEFCGAGKAVA+WTARA
Sbjct: 61  ASGLGHFDNTLPSKVILQLWRSADAVCFDVDSTVCLDEGIDELAEFCGAGKAVADWTARA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFEEALAARLSLFKPSL QVQ+FLE RPP++SPGI+ELVKKLKA N NVYLISGG
Sbjct: 121 MGGSVPFEEALAARLSLFKPSLPQVQEFLETRPPKISPGINELVKKLKAKNTNVYLISGG 180

Query: 181 FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY 240
           FR MINP+AS+LGIPPENIFANQLLF SSGEF+GFD NEPTSRSGGKA AVQ+IRK   Y
Sbjct: 181 FRQMINPVASILGIPPENIFANQLLFGSSGEFVGFDVNEPTSRSGGKATAVQKIRKVRGY 240

Query: 241 KVLAMIGDGATDLE 254
           K L MIGDGATDLE
Sbjct: 241 KALVMIGDGATDLE 254

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547199|ref|XP_002514657.1| phosphoserine phosphatase, putative [Ricinus communis] gi|223546261|gb|EEF47763.1| phosphoserine phosphatase, putative [Ricinus communis]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/254 (75%), Positives = 214/254 (84%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           MEGLV SQI P+    +Q  S  IP FSL L++N    R   M+ +++FNS  ASVQPL+
Sbjct: 1   MEGLVHSQIGPVRITCRQYRSCLIPAFSLHLKSNFIGVRNLSMRLTQAFNSATASVQPLD 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
            + +   +N LPSKEVL+LWR+ADAVCFDVDSTVC+DEGIDELAE+CGAG AVAEWTA+A
Sbjct: 61  PAKVDHFDNRLPSKEVLELWRSADAVCFDVDSTVCLDEGIDELAEYCGAGNAVAEWTAKA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFEEALAARLSLFKPSLSQV DFLEKRPP+LSPGI+EL+KKLKA N NVYLISGG
Sbjct: 121 MGGSVPFEEALAARLSLFKPSLSQVHDFLEKRPPKLSPGIEELIKKLKAKNTNVYLISGG 180

Query: 181 FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY 240
           FR MINP+AS+LGIPPENIFANQLLF +SGEFLGFDANEPTSRSGGKA AVQQIRK   Y
Sbjct: 181 FRQMINPVASILGIPPENIFANQLLFGNSGEFLGFDANEPTSRSGGKATAVQQIRKVQGY 240

Query: 241 KVLAMIGDGATDLE 254
           K L MIGDGATDLE
Sbjct: 241 KSLVMIGDGATDLE 254

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42571535|ref|NP_973858.1| phosphoserine phosphatase [Arabidopsis thaliana] gi|62900892|sp|O82796.2|SERB_ARATH RecName: Full=Phosphoserine phosphatase, chloroplastic; Short=PSP; Short=PSPase; AltName: Full=O-phosphoserine phosphohydrolase; Flags: Precursor gi|9795592|gb|AAF98410.1|AC026238_2 3-phosphoserine phosphatase [Arabidopsis thaliana] gi|17529132|gb|AAL38792.1| putative 3-phosphoserine phosphatase [Arabidopsis thaliana] gi|20465705|gb|AAM20321.1| putative 3-phosphoserine phosphatase [Arabidopsis thaliana] gi|21592986|gb|AAM64935.1| 3-phosphoserine phosphatase [Arabidopsis thaliana] gi|332191617|gb|AEE29738.1| phosphoserine phosphatase [Arabidopsis thaliana]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/254 (71%), Positives = 206/254 (81%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           ME L  S++ P+    ++  S+F     L+LR   CR  V +M H K    V ASVQP E
Sbjct: 1   MEALTTSRVVPVQVPCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPHE 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
            S LG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA
Sbjct: 61  LSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPGI+ELVKKL+ANN +VYLISGG
Sbjct: 121 MGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGG 180

Query: 181 FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY 240
           FR MINP+AS+LGIP ENIFAN LLF +SGEFLGFD NEPTSRSGGKA AVQQIRK   Y
Sbjct: 181 FRQMINPVASILGIPRENIFANNLLFGNSGEFLGFDENEPTSRSGGKAKAVQQIRKGRLY 240

Query: 241 KVLAMIGDGATDLE 254
           K +AMIGDGATDLE
Sbjct: 241 KTMAMIGDGATDLE 254

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3759177|dbj|BAA33806.1| 3-phosphoserine phosphatase [Arabidopsis thaliana] gi|3759179|dbj|BAA33807.1| 3-phosphoserin phosphatase [Arabidopsis thaliana]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/254 (71%), Positives = 206/254 (81%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           ME L  S++ P+    ++  S+F     L+LR   CR  V +M H K    V ASVQP E
Sbjct: 1   MEALTTSRVVPVQVPCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPHE 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
            S LG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA
Sbjct: 61  LSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPGI+ELVKKL+ANN +VYLISGG
Sbjct: 121 MGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGG 180

Query: 181 FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY 240
           FR MINP+AS+LGIP ENIFAN LLF +SGEFLGFD NEPTSRSGGKA AVQQIRK   Y
Sbjct: 181 FRQMINPVASILGIPRENIFANNLLFGNSGEFLGFDENEPTSRSGGKAKAVQQIRKGRLY 240

Query: 241 KVLAMIGDGATDLE 254
           K +AMIGDGATDLE
Sbjct: 241 KTMAMIGDGATDLE 254

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850248|ref|XP_002893005.1| 3-phosphoserine phosphatase [Arabidopsis lyrata subsp. lyrata] gi|297338847|gb|EFH69264.1| 3-phosphoserine phosphatase [Arabidopsis lyrata subsp. lyrata]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/255 (71%), Positives = 207/255 (81%), Gaps = 1/255 (0%)

Query: 1   MEGLVRSQISPIGAHYKQQ-HSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPL 59
           ME +  S++ P+    ++Q  S+F     ++LR   CR  V +M H K    V ASVQP 
Sbjct: 1   MEAIATSRVVPVQLPCRRQLSSLFANSSCIELRRYPCRGLVSIMHHPKLLRPVTASVQPQ 60

Query: 60  EASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 119
           E SALG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR
Sbjct: 61  ELSALGNESNVVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 120

Query: 120 AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISG 179
           AMGGSVPFEEALAARLSLFKPSLS+V+++LE RPPRLSPGI+ELVKKL+ANN +VYLISG
Sbjct: 121 AMGGSVPFEEALAARLSLFKPSLSKVEEYLENRPPRLSPGIEELVKKLRANNIDVYLISG 180

Query: 180 GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA 239
           GFR MINP+AS+LGIP ENIFAN LLF +SGEFLGFD NEPTSRSGGKA AVQQIRK   
Sbjct: 181 GFRQMINPVASILGIPRENIFANNLLFGNSGEFLGFDENEPTSRSGGKAKAVQQIRKGRL 240

Query: 240 YKVLAMIGDGATDLE 254
           YK +AMIGDGATDLE
Sbjct: 241 YKTMAMIGDGATDLE 255

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440850|ref|XP_004138197.1| PREDICTED: phosphoserine phosphatase, chloroplastic-like [Cucumis sativus]

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/254 (70%), Positives = 209/254 (82%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           ME L+ ++I P+  H +Q HS F PK  L+    L +  + M +   SFN +AASVQP+E
Sbjct: 1   MESLLSARIKPLPTHCRQIHSSFRPKLFLQFARRLDKGGMEMGRCGMSFNPIAASVQPIE 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
              L +  NT PSKE L+LWR+A+AVCFDVDSTVCVDEGIDELA+FCGAG+AVAEWTARA
Sbjct: 61  GPTLSKFNNTSPSKEALELWRSANAVCFDVDSTVCVDEGIDELADFCGAGEAVAEWTARA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFE+ALAARLSLF PSLSQV++FL K+PPRLSPGIDELVKKLKAN+ +VYLISGG
Sbjct: 121 MGGSVPFEDALAARLSLFNPSLSQVEEFLAKKPPRLSPGIDELVKKLKANSIDVYLISGG 180

Query: 181 FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY 240
           FR MINP+AS+LGIP ENIFANQLLF S+GEF+GFD +EPTSRSGGKA AVQQ+RKA  Y
Sbjct: 181 FRQMINPVASILGIPHENIFANQLLFGSNGEFVGFDKSEPTSRSGGKAVAVQQLRKARGY 240

Query: 241 KVLAMIGDGATDLE 254
           K L M GDGATDLE
Sbjct: 241 KTLVMTGDGATDLE 254

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508496|ref|XP_003522992.1| PREDICTED: phosphoserine phosphatase, chloroplastic-like [Glycine max]

 Score =  366 bits (939), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 185/256 (72%), Positives = 208/256 (81%), Gaps = 5/256 (1%)

Query: 1   MEGLVRSQISPIGAHYKQQH-SVFIPKFSLKLRTN-LCRARVGMMKHSKSFNSVAASVQP 58
           MEGLV S I+ +       H S F+P  +L LR N LC   +G+ K +K  + VAASV  
Sbjct: 1   MEGLVSSGINTVRVFSITNHQSRFLPSSTLHLRNNSLCGFGIGVEKKNKQCSVVAASVG- 59

Query: 59  LEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTA 118
              S +G  ENTLPSKEVL+LWR  DAVCFDVDSTVC+DEGIDELAEFCGAGKAVAEWTA
Sbjct: 60  --GSKVGHFENTLPSKEVLELWRNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTA 117

Query: 119 RAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLIS 178
           RAMGGSVPFEEALAARLSLF PSLSQ+Q+FLE++PPRLSPGI+ELV+KLKAN   VYLIS
Sbjct: 118 RAMGGSVPFEEALAARLSLFNPSLSQLQNFLEQKPPRLSPGIEELVQKLKANGIVVYLIS 177

Query: 179 GGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAH 238
           GGFR MINP+AS+LGIP ENIFANQLLF SSGEFLGFD NEPTSRSGGKA AVQQI+KA+
Sbjct: 178 GGFRQMINPVASILGIPQENIFANQLLFGSSGEFLGFDKNEPTSRSGGKAVAVQQIKKAN 237

Query: 239 AYKVLAMIGDGATDLE 254
            +K L M+GDGATD E
Sbjct: 238 GFKTLTMVGDGATDFE 253

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516867|ref|XP_003527114.1| PREDICTED: phosphoserine phosphatase, chloroplastic-like [Glycine max]

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 185/257 (71%), Positives = 207/257 (80%), Gaps = 6/257 (2%)

Query: 1   MEGLVRSQISPIGAHYKQQH-SVFIPKFSLKLRTN-LCRARVGM-MKHSKSFNSVAASVQ 57
           MEGLV S I+ +      +H S F+P  +L LR N +C   +G+  K  K    VAASV 
Sbjct: 1   MEGLVSSGINTVRVFGITKHQSRFLPSSTLHLRNNSVCGFGIGVEKKKKKQCFVVAASVG 60

Query: 58  PLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWT 117
               S +   ENTLPSKEVL+LWR  DAVCFDVDSTVC+DEGIDELAEFCGAGKAVAEWT
Sbjct: 61  ---GSKVVHFENTLPSKEVLELWRNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWT 117

Query: 118 ARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLI 177
           ARAMGGSVPFEEALAARLSLF PSLSQ+QDFLE++PPRLSPGI+ELV+KLKAN   VYLI
Sbjct: 118 ARAMGGSVPFEEALAARLSLFNPSLSQLQDFLEQKPPRLSPGIEELVQKLKANGIVVYLI 177

Query: 178 SGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKA 237
           SGGFR MINP+AS+LGIP ENIFANQLLF+SSGEFLGFD NEPTSRSGGKA AVQQI+KA
Sbjct: 178 SGGFRQMINPVASILGIPQENIFANQLLFRSSGEFLGFDKNEPTSRSGGKAVAVQQIKKA 237

Query: 238 HAYKVLAMIGDGATDLE 254
           H +K L M+GDGATD E
Sbjct: 238 HGFKTLTMVGDGATDFE 254

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|336441831|gb|ADM15724.2| phosphoserine phosphatase [Brassica juncea]

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 174/255 (68%), Positives = 203/255 (79%), Gaps = 1/255 (0%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTN-LCRARVGMMKHSKSFNSVAASVQPL 59
           ME L+ S++ P+    ++  S+      L+LR   + R  V +M +S+    V ASVQP 
Sbjct: 1   MEALLTSRVVPVQVPCRKLSSLSADLSCLELRRYPVRRGSVSIMSYSRLVRPVTASVQPQ 60

Query: 60  EASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 119
             SALG   NT+PSKE+L LWR  +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR
Sbjct: 61  RVSALGNEGNTVPSKEILDLWRGVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 120

Query: 120 AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISG 179
           AMGGSVPFEEALAARLSLFKPSLS+V ++L+K PPRLSPGI+ELVKKL+AN + ++LISG
Sbjct: 121 AMGGSVPFEEALAARLSLFKPSLSKVDEYLQKTPPRLSPGIEELVKKLRANKRGLFLISG 180

Query: 180 GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA 239
           GFR MINP+ASVLGIP E IFAN LLF +SGEF+GFD NEPTSRSGGKA AVQQIR+A  
Sbjct: 181 GFRQMINPVASVLGIPREYIFANNLLFGNSGEFVGFDENEPTSRSGGKAKAVQQIREARL 240

Query: 240 YKVLAMIGDGATDLE 254
           YK +AM GDGATDLE
Sbjct: 241 YKTMAMFGDGATDLE 255

Source: Brassica juncea

Species: Brassica juncea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	259
TAIR|locus:2027433	295	PSP "AT1G18640" [Arabidopsis t	0.980	0.861	0.681	2.9e-87
UNIPROTKB|E1C9F4	226	PSPH "Uncharacterized protein"	0.694	0.796	0.505	3.4e-45
UNIPROTKB|F1RIU1	225	PSPH "Uncharacterized protein"	0.694	0.8	0.511	9.1e-45
WB|WBGene00013379	279	Y62E10A.13 [Caenorhabditis ele	0.768	0.713	0.483	9.1e-45
UNIPROTKB|E2RPN5	231	PSPH "Uncharacterized protein"	0.694	0.779	0.511	1.2e-44
UNIPROTKB|Q2KHU0	225	PSPH "Phosphoserine phosphatas	0.694	0.8	0.505	1.5e-44
UNIPROTKB|C9JBI3	187	PSPH "Phosphoserine phosphatas	0.694	0.962	0.505	2.4e-44
UNIPROTKB|P78330	225	PSPH "Phosphoserine phosphatas	0.694	0.8	0.505	2.4e-44
UNIPROTKB|Q5RB83	225	PSPH "Phosphoserine phosphatas	0.694	0.8	0.505	2.4e-44
MGI|MGI:97788	225	Psph "phosphoserine phosphatas	0.694	0.8	0.505	2.4e-44

TAIR|locus:2027433 PSP "AT1G18640" [Arabidopsis thaliana (taxid:3702)]

 Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
 Identities = 173/254 (68%), Positives = 195/254 (76%)

Query:     1 MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
             ME L  S++ P+    ++  S+F     L+LR   CR  V +M H K    V ASVQP E
Sbjct:     1 MEALTTSRVVPVQVPCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPHE 60

Query:    61 ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
              S LG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA
Sbjct:    61 LSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120

Query:   121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGG 180
             MGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPGI+E            YLISGG
Sbjct:   121 MGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGG 180

Query:   181 FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY 240
             FR MINP+AS+LGIP ENIFAN LLF +SGEFLGFD NEPTSRSGGKA AVQQIRK   Y
Sbjct:   181 FRQMINPVASILGIPRENIFANNLLFGNSGEFLGFDENEPTSRSGGKAKAVQQIRKGRLY 240

Query:   241 KVLAMIGDGATDLE 254
             K +AMIGDGATDLE
Sbjct:   241 KTMAMIGDGATDLE 254

GO:0000287 "magnesium ion binding" evidence=IBA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA;IDA

GO:0006564 "L-serine biosynthetic process" evidence=IEA;IBA;TAS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|E1C9F4 PSPH "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 91/180 (50%), Positives = 122/180 (67%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +++R ADAVCFDVDSTV  +EGIDELA+FCG G AVAE T RAMGG+V F+ AL AR
Sbjct:     6 EMKEIFRNADAVCFDVDSTVIREEGIDELAKFCGVGDAVAEMTRRAMGGTVTFKAALTAR 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGI 194
             L L +PS  QVQ  +   PP+L+PGI E            +L+SGGF+ ++  +A  L I
Sbjct:    66 LGLIRPSYEQVQKLISDNPPQLTPGIRELVNRLHQRGVQVFLVSGGFQSIVEHVALQLNI 125

Query:   195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
             P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   +  +++   +K + MIGDGATD+E
Sbjct:   126 PTANVFANRLKFYFNGEYAGFDETQPTAESGGKGKVITHLKEQFHFKKVVMIGDGATDME 185

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

UNIPROTKB|F1RIU1 PSPH "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 92/180 (51%), Positives = 124/180 (68%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG+VPF+ AL  R
Sbjct:     6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGI 194
             L+L +PS  QVQ  + + PP L+PGI E            +LISGGFR ++  +AS L I
Sbjct:    66 LALIQPSREQVQRLIAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query:   195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
             P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct:   126 PSTNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKFLKEKFHFKKIVMIGDGATDME 185

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

WB|WBGene00013379 Y62E10A.13 [Caenorhabditis elegans (taxid:6239)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 102/211 (48%), Positives = 134/211 (63%)

Query:    58 PLEASALGRSENTLP----SK----EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGA 109
             P  ASA+ RS +T P    SK    EV ++WR ADAVCFDVDSTVC DEGIDELA + G 
Sbjct:    23 PTTASAIPRSISTSPGETISKNHEEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGV 82

Query:   110 GKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXX 169
             G+AVA  T  AM G+  F +ALAARL + KP+  Q++ F+    P+L+ GI E       
Sbjct:    83 GEAVANVTRTAMNGNARFRDALAARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHA 142

Query:   170 XXXXXYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG---- 225
                  YL+SGGFR +I P+A +LGI    I+AN++LF   G++ GFD +E TS SG    
Sbjct:   143 RGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILFDKFGKYHGFDTSELTSDSGSKET 202

Query:   226 GKAAAVQQIRKAHAYKVLAMIGDGATDLEVS 256
             GK A +  ++K + YK + M+GDGATD+E S
Sbjct:   203 GKPAVIALLKKMYNYKTVVMVGDGATDVEAS 233

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2RPN5 PSPH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
 Identities = 92/180 (51%), Positives = 123/180 (68%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA FCG   AV+E T RAMGG+VPF+ AL  R
Sbjct:    12 ELRKLFCSADAVCFDVDSTVIREEGIDELARFCGVEDAVSEMTRRAMGGAVPFKAALTER 71

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGI 194
             L+L +PS  QVQ  + + PP L+PGI E            +LISGGFR ++  +AS L I
Sbjct:    72 LALIQPSREQVQRLIAEHPPHLTPGIRELVSHLQERNVQVFLISGGFRSIVEHVASKLNI 131

Query:   195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
             P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct:   132 PSTNVFANRLKFYFNGEYAGFDEMQPTAESGGKGKVIKLLKEKFQFKKIVMIGDGATDME 191

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

UNIPROTKB|Q2KHU0 PSPH "Phosphoserine phosphatase" [Bos taurus (taxid:9913)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 91/180 (50%), Positives = 123/180 (68%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+  L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T +AMGG+VPF+ AL  R
Sbjct:     6 ELRNLFCSADAVCFDVDSTVIQEEGIDELAKFCGVEDAVSEMTRQAMGGAVPFKAALTQR 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGI 194
             L+L +PS  QVQ  L + PP L+PGI E            +LISGGFR ++  +AS L I
Sbjct:    66 LALIQPSREQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query:   195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
             P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + M+GDGATD+E
Sbjct:   126 PSTNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIVMVGDGATDME 185

GO:0004647 "phosphoserine phosphatase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0006563 "L-serine metabolic process" evidence=ISS

GO:0006564 "L-serine biosynthetic process" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=IEA

UNIPROTKB|C9JBI3 PSPH "Phosphoserine phosphatase" [Homo sapiens (taxid:9606)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 91/180 (50%), Positives = 124/180 (68%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct:     6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGI 194
             L+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR ++  +AS L I
Sbjct:    66 LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query:   195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
             P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct:   126 PATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDME 185

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0009612 "response to mechanical stimulus" evidence=IEA

GO:0031667 "response to nutrient levels" evidence=IEA

GO:0033574 "response to testosterone stimulus" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

UNIPROTKB|P78330 PSPH "Phosphoserine phosphatase" [Homo sapiens (taxid:9606)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 91/180 (50%), Positives = 124/180 (68%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct:     6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGI 194
             L+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR ++  +AS L I
Sbjct:    66 LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query:   195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
             P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct:   126 PATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDME 185

GO:0009612 "response to mechanical stimulus" evidence=IEA

GO:0031667 "response to nutrient levels" evidence=IEA

GO:0033574 "response to testosterone stimulus" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0005737 "cytoplasm" evidence=IBA

GO:0006564 "L-serine biosynthetic process" evidence=IBA;TAS

GO:0004647 "phosphoserine phosphatase activity" evidence=IDA;TAS

GO:0006563 "L-serine metabolic process" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0005509 "calcium ion binding" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0005829 "cytosol" evidence=TAS

GO:0008652 "cellular amino acid biosynthetic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|Q5RB83 PSPH "Phosphoserine phosphatase" [Pongo abelii (taxid:9601)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 91/180 (50%), Positives = 124/180 (68%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct:     6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGI 194
             L+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR ++  +AS L I
Sbjct:    66 LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query:   195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
             P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct:   126 PATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDME 185

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0004647 "phosphoserine phosphatase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0006563 "L-serine metabolic process" evidence=ISS

MGI|MGI:97788 Psph "phosphoserine phosphatase" [Mus musculus (taxid:10090)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 91/180 (50%), Positives = 125/180 (69%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  R
Sbjct:     6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTQR 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGI 194
             L+L +PS  QVQ  L + PP L+PGI E            +LISGGFR ++  +A+ L I
Sbjct:    66 LALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVAAKLNI 125

Query:   195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
             P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct:   126 PTTNVFANRLKFYFNGEYAGFDEMQPTAESGGKGKVIRFLKEKFHFKKIIMIGDGATDME 185

GO:0000287 "magnesium ion binding" evidence=ISO;IBA

GO:0004647 "phosphoserine phosphatase activity" evidence=ISO;IBA

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=IBA

GO:0006563 "L-serine metabolic process" evidence=ISO

GO:0006564 "L-serine biosynthetic process" evidence=IBA

GO:0008152 "metabolic process" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5RB83	SERB_PONAB	3, ., 1, ., 3, ., 3	0.5333	0.6949	0.8	yes	no
Q9VSY6	SERB_DROME	3, ., 1, ., 3, ., 3	0.5280	0.6833	0.6555	yes	no
Q2KHU0	SERB_BOVIN	3, ., 1, ., 3, ., 3	0.5333	0.6949	0.8	yes	no
Q5M819	SERB_RAT	3, ., 1, ., 3, ., 3	0.5333	0.6949	0.8	yes	no
Q99LS3	SERB_MOUSE	3, ., 1, ., 3, ., 3	0.5333	0.6949	0.8	yes	no
P78330	SERB_HUMAN	3, ., 1, ., 3, ., 3	0.5333	0.6949	0.8	yes	no
O82796	SERB_ARATH	3, ., 1, ., 3, ., 3	0.7165	0.9806	0.8610	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.976
3rd Layer	3.1.3.3	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	259
PLN02954	224	PLN02954, PLN02954, phosphoserine phosphatase	1e-129
TIGR00338	219	TIGR00338, serB, phosphoserine phosphatase SerB	4e-41
COG0560	212	COG0560, SerB, Phosphoserine phosphatase [Amino ac	2e-27
TIGR01488	177	TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superf	3e-25
PRK11133	322	PRK11133, serB, phosphoserine phosphatase; Provisi	8e-16
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	3e-13
pfam12710	122	pfam12710, HAD, haloacid dehalogenase-like hydrola	2e-12
TIGR01489	188	TIGR01489, DKMTPPase-SF, 2,3-diketo-5-methylthio-1	1e-08
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	6e-08
TIGR03333	214	TIGR03333, salvage_mtnX, 2-hydroxy-3-keto-5-methyl	7e-08
COG4359	220	COG4359, COG4359, Uncharacterized conserved protei	2e-07
TIGR01511	572	TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans	7e-06
TIGR01490	202	TIGR01490, HAD-SF-IB-hyp1, HAD-superfamily subfami	2e-05
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	4e-05
PRK09552	219	PRK09552, mtnX, 2-hydroxy-3-keto-5-methylthiopente	1e-04
COG2217	713	COG2217, ZntA, Cation transport ATPase [Inorganic	0.002

>gnl|CDD|215514 PLN02954, PLN02954, phosphoserine phosphatase

 Score =  365 bits (939), Expect = e-129
 Identities = 150/183 (81%), Positives = 167/183 (91%)

Query: 72  PSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEAL 131
           PSK+VL+LWR+ADAVCFDVDSTVCVDEGIDELAEFCGAG+AVAEWTA+AMGGSVPFEEAL
Sbjct: 1   PSKDVLELWRSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEAL 60

Query: 132 AARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV 191
           AARLSLFKPSLSQV++FLEKRPPRLSPGI ELVKKL+A   +VYL+SGGFR MI P+A++
Sbjct: 61  AARLSLFKPSLSQVEEFLEKRPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI 120

Query: 192 LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGAT 251
           LGIPPENIFANQ+LF  SGE+ GFD NEPTSRSGGKA AVQ I+K H YK + MIGDGAT
Sbjct: 121 LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGAT 180

Query: 252 DLE 254
           DLE
Sbjct: 181 DLE 183

Length = 224

>gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB

 Score =  140 bits (355), Expect = 4e-41
 Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 11/178 (6%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP 140
           R+   V FD+DST+   E IDE+A+  G  + V+E T RAM G + F+ +L  R++L K 
Sbjct: 12  RSKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKG 71

Query: 141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIF 200
              ++   + +  P L+ G +ELVK LK     V +ISGGF      +   LG+     F
Sbjct: 72  LPVELLKEVRENLP-LTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA--AF 128

Query: 201 ANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKV----LAMIGDGATDLE 254
           AN+L  +  G+  G         S  K   +  +       +       +GDGA DL 
Sbjct: 129 ANRLEVE-DGKLTGLVEGPIVDAS-YKGKTLLIL--LRKEGISPENTVAVGDGANDLS 182

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219

>gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism]

 Score =  104 bits (261), Expect = 2e-27
 Identities = 63/179 (35%), Positives = 90/179 (50%), Gaps = 14/179 (7%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP 140
           R      FD+D T+   E IDELA   G G+ V   T RAM G + FEE+L  R++L K 
Sbjct: 3   RMKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKG 62

Query: 141 -SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENI 199
             +  +++  E+    L+PG +ELV  LKA    V +ISGGF  ++ PIA  LGI  + +
Sbjct: 63  LPVEVLEEVREEFLR-LTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI--DYV 119

Query: 200 FANQLLFKS---SGEFLGFDANEPTSRSGGKAAAVQQIRKAH--AYKVLAMIGDGATDL 253
            AN+L       +G  +G     P     GKA A++++        +     GD A DL
Sbjct: 120 VANELEIDDGKLTGRVVG-----PICDGEGKAKALRELAAELGIPLEETVAYGDSANDL 173

Length = 212

>gnl|CDD|233435 TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

 Score = 98.2 bits (245), Expect = 3e-25
 Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 8/175 (4%)

Query: 85  AVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS 143
              FD D T+   +  ID LA+  G    V E T  A  G + FE+AL  RL+L   S S
Sbjct: 1   LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRS 60

Query: 144 Q--VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFA 201
           +   ++FL ++   L PG  EL+  LK    +  ++SGGF   + P+A  LGI  +++FA
Sbjct: 61  EEVAKEFLARQVA-LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGI--DDVFA 117

Query: 202 NQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLE 254
           N+L F  +G   G    +       K   ++++ +      K +  +GD   DL 
Sbjct: 118 NRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLP 172

This model represents a subfamily of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. Subfamily IA, B, C and D are distinguished from the rest of the superfamily by the presence of a variable domain between the first and second conserved catalytic motifs. In subfamilies IA and IB, this domain consists of an alpha-helical bundle. It was necessary to model these two subfamilies separately, breaking them at a an apparent phylogenetic bifurcation, so that the resulting model(s) are not so broadly defined that members of subfamily III (which lack the variable domain) are included. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|182988 PRK11133, serB, phosphoserine phosphatase; Provisional

 Score = 75.4 bits (186), Expect = 8e-16
 Identities = 67/187 (35%), Positives = 95/187 (50%), Gaps = 31/187 (16%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP 140
           RT   +  D+DST    E IDE+A+  G G+ VAE T RAM G + FE +L  R++  K 
Sbjct: 108 RTPGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKG 167

Query: 141 S----LSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPP 196
           +    L QV++ L   P  L PG+ ELV KL+A    V + SGGF +  + +   L +  
Sbjct: 168 ADANILQQVRENL---P--LMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRL-- 220

Query: 197 ENIFANQLLF---KSSGEFLG--FDANEPTSRSGGKAAAVQQIRKAHAYKV-----LAMI 246
           +   AN+L     K +G  LG   DA         KA  + ++  A  Y++     +A I
Sbjct: 221 DAAVANELEIMDGKLTGNVLGDIVDAQY-------KADTLTRL--AQEYEIPLAQTVA-I 270

Query: 247 GDGATDL 253
           GDGA DL
Sbjct: 271 GDGANDL 277

Length = 322

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 65.8 bits (160), Expect = 3e-13
 Identities = 45/193 (23%), Positives = 67/193 (34%), Gaps = 35/193 (18%)

Query: 84  DAVCFDVDST-------VCVDEGIDELAE---------------FCGAGKAVAEWTARAM 121
            AV FD+D T       V   E + E A                  G  + V     RA+
Sbjct: 2   KAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRAL 61

Query: 122 GGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGF 181
            G    EE L A  ++    L  V   L      L PG  E +K+LK     + +++G  
Sbjct: 62  AGEELLEELLRAGATVVA-VLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDN 120

Query: 182 RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYK 241
           R   N IA +LG+    + A+       G        +P  +    A     ++      
Sbjct: 121 RLTANAIARLLGLFDALVSADLYGLVGVG--------KPDPKIFELALEELGVKPEEV-- 170

Query: 242 VLAMIGDGATDLE 254
              M+GDG  D+ 
Sbjct: 171 --LMVGDGVNDIP 181

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|221729 pfam12710, HAD, haloacid dehalogenase-like hydrolase

 Score = 62.2 bits (151), Expect = 2e-12
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 147 DFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQL-L 205
             L +            +   +   + V ++SG    ++ P+A  LGI   N+   +L  
Sbjct: 17  LLLLEALAEDRRLGLLGLSDAEELLELVVIVSGSPEPLVRPVAKALGIDDVNVVGTELEN 76

Query: 206 FKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
               G   G    E      GKAAA++++ +      +  +GD  +DL 
Sbjct: 77  VLVDGRLTGKLDGE------GKAAALKRLAQKIGRYPVVAVGDSISDLP 119

Length = 122

>gnl|CDD|213629 TIGR01489, DKMTPPase-SF, 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 10/180 (5%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEW-TARAMGGSVPFEEALAARLSLFKPSLSQ 144
           V  D D T+ +++  D + +  G  +A        +   S+ F +     L        +
Sbjct: 4   VVSDFDGTITLNDSDDWITDKFGPPEANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDE 63

Query: 145 VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPE--NIFAN 202
           + + L+  P  + PG  E +  +K +  +  +IS G    I+P+   +G       I++N
Sbjct: 64  ILEVLKSAP--IDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSN 121

Query: 203 QLLFKSSGEF--LGFDANEPTSRSGG--KAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF 258
              F + G         +   S   G  K   + ++     Y+ +  IGDG TD+  +  
Sbjct: 122 PASFDNDGRHIVWPHHCHGCCSCPCGCCKGKVIHKLS-EPKYQHIIYIGDGVTDVCPAKL 180

This phosphatase is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. With the exception of OMNI|NTL01BS01361 from B. subtilis and GP|15024582 from Clostridium acetabutylicum, the members of this group are all eukaryotic, spanning metazoa, plants and fungi. The B. subtilus gene (YkrX, renamed MtnX) is part of an operon for the conversion of methylthioribose (MTR) to methionine. It works with the enolase MtnW, a RuBisCO homolog. The combination of MtnW and MtnX achieves the same overall reaction as the enolase-phosphatase MtnC. The function of MtnX was shown by Ashida, et al. (2003) to be 2,3-diketo-5-methylthio-1-phosphopentane phosphatase, rather than 2,3-diketo-5-methylthio-1-phosphopentane phosphatase as proposed earlier. See the Genome Property for methionine salvage for more details. In eukaryotes, methionine salvage from methylthioadenosine also occurs. It seems reasonable that members of this family in eukaryotes fulfill a similar role as in Bacillus. A more specific, equivalog-level model is TIGR03333. Note that a member of this family from S. cerevisiae is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact [Central intermediary metabolism, Other]. Length = 188

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 50.1 bits (120), Expect = 6e-08
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 6/113 (5%)

Query: 147 DFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN---IFANQ 203
              E     L PG+ E +K+LK     + L +   R  +  +   LG+       I +N 
Sbjct: 16  GIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNG 75

Query: 204 LL--FKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
               +   G FLG    +    +  K  A  ++      +VL M+GD   D+E
Sbjct: 76  AAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVL-MVGDSLNDIE 127

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|213797 TIGR03333, salvage_mtnX, 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

 Score = 51.3 bits (123), Expect = 7e-08
 Identities = 38/179 (21%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 89  DVDSTVCVDEGIDELAE-FCGAGKAVAEWTA---RAMGGSVPFEEALAARLSLFKPSL-S 143
           D D T+  ++ I  + + F     A  EW A     +  ++  +E +     L   SL  
Sbjct: 5   DFDGTITNNDNIISIMKQF-----APPEWEALKDGVLSKTLSIQEGVGRMFGLLPSSLKE 59

Query: 144 QVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQ 203
           ++  F+      +  G  E V  +  +    Y+ISGG    + P+   + +  + I+ N+
Sbjct: 60  EITSFV-LETAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI-VEKDRIYCNE 117

Query: 204 LLFKSSGEFLGFDANEPTSRSGG------KAAAVQQIRKAHAYKVLAMIGDGATDLEVS 256
             F  S E++  D   P   +        K + ++++ + + Y +  +IGD  TD+E +
Sbjct: 118 ADF--SNEYIHIDWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHI--VIGDSVTDVEAA 172

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX [Amino acid biosynthesis, Aspartate family, Central intermediary metabolism, Sulfur metabolism]. Length = 214

>gnl|CDD|226802 COG4359, COG4359, Uncharacterized conserved protein [Function unknown]

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 32/176 (18%), Positives = 69/176 (39%), Gaps = 17/176 (9%)

Query: 89  DVDSTVCVDEGIDELAEFCGAGKAVA---EWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           D D T+ +++  D + +  G G+  A         +  ++ F +           SL ++
Sbjct: 9   DFDGTITLNDSNDYITDTFGPGEWKALKDGV----LSKTISFRDGFGRMFGSIHSSLEEI 64

Query: 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPE----NIFA 201
            +FL K   ++ PG  E V+ +K ++    ++S G    I P+   +         +I +
Sbjct: 65  LEFLLKDI-KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVS 123

Query: 202 NQLLFKSSGEFLGFDANEPTSRSG-GKAAAVQQIRKAHAYKVLAMIGDGATDLEVS 256
           N       G+          S+ G  K++ + ++ + +        GD  +DL  +
Sbjct: 124 NNDYIHIDGQH--SIKYTDDSQFGHDKSSVIHELSEPNESIF--YCGDSVSDLSAA 175

Length = 220

>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 24/128 (18%)

Query: 125 VPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHM 184
               E      S+      ++   L      L P   E+++ LK       +++G  R  
Sbjct: 385 DGEVEEGGGTTSVLVAVNGELAGVLALADQ-LKPEAKEVIQALKRRGIEPVMLTGDNRKT 443

Query: 185 INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLA 244
              +A  LGI  EN+ A  L               P      KAA ++++++    KV+A
Sbjct: 444 AKAVAKELGI--ENVRAEVL---------------PD----DKAALIKKLQE--KGKVVA 480

Query: 245 MIGDGATD 252
           M+GDG  D
Sbjct: 481 MVGDGIND 488

This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572

>gnl|CDD|233436 TIGR01490, HAD-SF-IB-hyp1, HAD-superfamily subfamily IB hydrolase, TIGR01490

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 18/134 (13%)

Query: 129 EALAARLSLFKPSLSQVQDFLE-----KRPPRLSPGIDELVKKLKANNKNVYLISGGFRH 183
           +ALA  L         V+  +E     K    L P   +L++  KA    + L+S     
Sbjct: 62  DALAGLLE------EDVRAIVEEFVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTI 115

Query: 184 MINPIASVLGIPPENIFANQLLFKSSGEFLG-FDANEPTSRSGGKAAAVQQIRKAH--AY 240
           ++ P+A +LGI  +N    +L     G + G  D      +  GK  A+ ++        
Sbjct: 116 LVKPLARILGI--DNAIGTRLEESEDGIYTGNIDG--NNCKGEGKVHALAELLAEEQIDL 171

Query: 241 KVLAMIGDGATDLE 254
           K     GD  +DL 
Sbjct: 172 KDSYAYGDSISDLP 185

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by This model are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in This model possess PSPase activity. OMNI|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog [Unknown function, Enzymes of unknown specificity]. Length = 202

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 11/123 (8%)

Query: 88  FDVDSTVC-VDEGI-DELAEFCGA--GKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS 143
           FD+D T+   D  I + L +      G  ++    R  GG +PF+EALA  L        
Sbjct: 3   FDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGG-LPFDEALADLLREHPIDPD 61

Query: 144 QVQDFLEKRP----PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP--PE 197
           ++ + L +          P + EL+++LKA    + ++S G R  +  +   LG+    +
Sbjct: 62  EILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKLGLLDLFD 121

Query: 198 NIF 200
            +F
Sbjct: 122 AVF 124

Length = 176

>gnl|CDD|236562 PRK09552, mtnX, 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 13/127 (10%)

Query: 136 SLFKPSLSQ-VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194
            L   +L + +  FL +    +  G  E V+ +K NN   Y++SGG    + P+   L I
Sbjct: 55  QLLPSNLKEEIIQFLLETA-EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-I 112

Query: 195 PPENIFANQLLFKSSGEFLGFD----ANEPTSRSGG--KAAAVQQIRKAHAYKVLAMIGD 248
           P E I+ N   F  SGE++        +E      G  K + ++++   + + +  +IGD
Sbjct: 113 PKEQIYCNGSDF--SGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHI--VIGD 168

Query: 249 GATDLEV 255
             TDLE 
Sbjct: 169 SITDLEA 175

Length = 219

>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score = 39.1 bits (92), Expect = 0.002
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 25/100 (25%)

Query: 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEF 212
             R  P   E +  LKA    V +++G  R     IA  LGI  + + A  L        
Sbjct: 537 ELR--PDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI--DEVRAELL-------- 584

Query: 213 LGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATD 252
                  P      KA  V++++     + +AM+GDG  D
Sbjct: 585 -------P----EDKAEIVRELQAE--GRKVAMVGDGIND 611

Length = 713

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	259
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	100.0
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	99.97
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	99.96
PLN02954	224	phosphoserine phosphatase	99.95
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.94
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.93
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.93
PRK01122	679	potassium-transporting ATPase subunit B; Provision	99.92
PRK14010	673	potassium-transporting ATPase subunit B; Provision	99.92
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	99.91
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.9
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	99.9
PRK10671	834	copA copper exporting ATPase; Provisional	99.89
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	99.88
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.88
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	99.88
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	99.88
PRK15122	903	magnesium-transporting ATPase; Provisional	99.87
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	99.87
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	99.86
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.86
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.85
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	99.85
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	99.84
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.84
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	99.82
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.82
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.81
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.81
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	99.81
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	99.8
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	99.78
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	99.77
COG4359	220	Uncharacterized conserved protein [Function unknow	99.76
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.75
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	99.74
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	99.74
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	99.71
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	99.71
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.71
COG0546	220	Gph Predicted phosphatases [General function predi	99.7
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.7
PRK11590	211	hypothetical protein; Provisional	99.69
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.69
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.69
PRK13288	214	pyrophosphatase PpaX; Provisional	99.67
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.66
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	99.66
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.66
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.64
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.64
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.64
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.63
PLN02575	381	haloacid dehalogenase-like hydrolase	99.63
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.63
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.63
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.63
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.62
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.62
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.62
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.61
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.59
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	99.59
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.59
PRK11587	218	putative phosphatase; Provisional	99.58
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.58
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.57
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.56
PRK09449	224	dUMP phosphatase; Provisional	99.55
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.54
PLN02940	382	riboflavin kinase	99.52
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.52
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.52
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.51
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.51
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.51
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.5
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.5
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.49
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.49
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.48
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.47
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	99.47
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.47
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.46
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.44
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.42
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.41
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.4
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.39
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.38
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.38
PRK08238	479	hypothetical protein; Validated	99.36
PHA02597	197	30.2 hypothetical protein; Provisional	99.35
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.34
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	99.33
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.32
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	99.31
PLN02177	497	glycerol-3-phosphate acyltransferase	99.28
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.28
KOG0203	1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	99.28
KOG0205	942	consensus Plasma membrane H+-transporting ATPase [	99.27
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.27
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	99.26
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.24
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.24
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	99.22
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.21
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.21
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.21
PRK10976	266	putative hydrolase; Provisional	99.18
PRK06769	173	hypothetical protein; Validated	99.17
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.16
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.15
COG4087	152	Soluble P-type ATPase [General function prediction	99.14
KOG0208	1140	consensus Cation transport ATPase [Inorganic ion t	99.14
PRK10513	270	sugar phosphate phosphatase; Provisional	99.11
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.09
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.07
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.05
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.05
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	99.03
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	99.02
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.01
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.0
PLN02811	220	hydrolase	98.99
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	98.99
PLN02887	580	hydrolase family protein	98.98
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	98.95
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	98.95
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.91
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.88
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.87
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.86
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	98.83
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	98.78
PHA02530	300	pseT polynucleotide kinase; Provisional	98.76
PLN03190	1178	aminophospholipid translocase; Provisional	98.76
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	98.73
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	98.72
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	98.72
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	98.72
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	98.72
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	98.67
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	98.58
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	98.56
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	98.49
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	98.48
COG4030	315	Uncharacterized protein conserved in archaea [Func	98.48
PLN02645	311	phosphoglycolate phosphatase	98.47
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	98.46
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	98.45
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	98.41
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	98.4
PRK10444	248	UMP phosphatase; Provisional	98.4
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.4
COG0241	181	HisB Histidinol phosphatase and related phosphatas	98.39
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	98.37
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.31
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	98.28
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	98.27
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.26
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.24
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	98.23
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	98.2
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.19
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	98.16
KOG0206	1151	consensus P-type ATPase [General function predicti	98.13
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.06
COG2503	274	Predicted secreted acid phosphatase [General funct	97.98
PLN02499	498	glycerol-3-phosphate acyltransferase	97.9
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.89
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	97.78
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	97.77
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	97.74
COG4996	164	Predicted phosphatase [General function prediction	97.71
COG4229	229	Predicted enolase-phosphatase [Energy production a	97.57
KOG3128	298	consensus Uncharacterized conserved protein [Funct	97.57
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.53
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	97.43
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	97.4
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.38
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	97.34
PTZ00174	247	phosphomannomutase; Provisional	97.34
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.26
PLN02382	413	probable sucrose-phosphatase	97.21
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	97.18
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	97.12
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.09
PTZ00445	219	p36-lilke protein; Provisional	96.95
PTZ00174	247	phosphomannomutase; Provisional	96.93
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	96.88
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	96.85
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	96.71
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	96.52
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	96.5
PLN02423	245	phosphomannomutase	96.5
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	96.43
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	96.33
PLN02423	245	phosphomannomutase	96.3
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	96.22
KOG2116	738	consensus Protein involved in plasmid maintenance/	95.59
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	95.51
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	95.35
PLN02645	311	phosphoglycolate phosphatase	94.83
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	94.75
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	94.64
COG3700	237	AphA Acid phosphatase (class B) [General function	94.63
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	94.46
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	94.21
PLN02580	384	trehalose-phosphatase	94.18
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	94.15
PLN03017	366	trehalose-phosphatase	94.09
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	94.06
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	94.02
PRK10444	248	UMP phosphatase; Provisional	93.9
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	93.72
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	93.65
PLN02151	354	trehalose-phosphatase	93.18
COG5663	194	Uncharacterized conserved protein [Function unknow	92.63
PLN02580	384	trehalose-phosphatase	91.96
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	90.71
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	90.6
PLN03190	1178	aminophospholipid translocase; Provisional	89.96
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	89.23
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	89.22
KOG1618	389	consensus Predicted phosphatase [General function	88.43
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	87.61
COG0731	296	Fe-S oxidoreductases [Energy production and conver	87.3
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	85.4
PLN02382	413	probable sucrose-phosphatase	85.35
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	82.4
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	81.91
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	80.97
PLN02151	354	trehalose-phosphatase	80.85
PLN03017	366	trehalose-phosphatase	80.18

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=100.00  E-value=8.6e-33  Score=215.40  Aligned_cols=183  Identities=61%  Similarity=1.005  Sum_probs=174.5

Q ss_pred             HHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCC
Q 025042           75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPP  154 (259)
Q Consensus        75 ~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  154 (259)
                      +..+.+...++||||+|-|++..+.++++++.++.++++..++++.|+|+++|.+.+..++..+.+...++.+++....+
T Consensus         8 e~~~~~~~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~~k~   87 (227)
T KOG1615|consen    8 ELAKLWRSADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIKQKP   87 (227)
T ss_pred             HHHHHHHhcCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhcCCC
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999999889


Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      ++.||+++++..|+++|.+++++||+++..+.+++++|||+..++|++.+.|+.+|.+.|++...|...+..|+++++.+
T Consensus        88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l  167 (227)
T KOG1615|consen   88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL  167 (227)
T ss_pred             ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence            99999999999999999999999999999999999999999777999999999999999999999999999999999999


Q ss_pred             HHHcCCCeEEEEecCcccHHhhh
Q 025042          235 RKAHAYKVLAMIGDGATDLEVSI  257 (259)
Q Consensus       235 ~~~~g~~~v~~vGDg~ND~~al~  257 (259)
                      ++.+++..++|||||.||++|..
T Consensus       168 rk~~~~~~~~mvGDGatDlea~~  190 (227)
T KOG1615|consen  168 RKNYNYKTIVMVGDGATDLEAMP  190 (227)
T ss_pred             HhCCChheeEEecCCccccccCC
Confidence            99666689999999999999864

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=99.97  E-value=4e-31  Score=248.15  Aligned_cols=228  Identities=21%  Similarity=0.244  Sum_probs=151.7

Q ss_pred             ccccccccccccccccccccchhh-----hhhhccccceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHh
Q 025042            5 VRSQISPIGAHYKQQHSVFIPKFS-----LKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQL   79 (259)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~   79 (259)
                      +++||+|+.+-+--+...+|.-+.     -++-.   .++|.|.+|||++.+.++.+....+++++++|+++|+++++|.
T Consensus       325 ~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~---a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~  401 (713)
T COG2217         325 VASYFVPVVLVIAALTFALWPLFGGGDWETALYR---ALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALER  401 (713)
T ss_pred             HHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHH---HHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHh
Confidence            467888855434333333342221     11211   2466777777766665555555557999999999999999999


Q ss_pred             ccCcCEEEEeCCCcccccch-----------HHHHH-HHhc----Cchh-HHHHHHHHcC-CCCc---HHHHHHHHH---
Q 025042           80 WRTADAVCFDVDSTVCVDEG-----------IDELA-EFCG----AGKA-VAEWTARAMG-GSVP---FEEALAARL---  135 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~~-----------~~~l~-~~~~----~~~~-~~~~~~~~~~-~~~~---~~~~~~~~~---  135 (259)
                      ++++|+++||||||||.++.           .+++. ..+.    ..++ .+++.+.... +..+   +.+..+.-+   
T Consensus       402 l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~~e~~~L~laAalE~~S~HPiA~AIv~~a~~~~~~~~~~~~~i~G~Gv~~~  481 (713)
T COG2217         402 LAKVDTVVFDKTGTLTEGKPEVTDVVALDGDEDELLALAAALEQHSEHPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAE  481 (713)
T ss_pred             hccCCEEEEeCCCCCcCCceEEEEEecCCCCHHHHHHHHHHHHhcCCChHHHHHHHHHHhcCCCCccceeeeccCcEEEE
Confidence            99999999999999988742           12222 1111    1222 2334432221 1111   111111000   


Q ss_pred             -----------hhcC--C-----CHHHHHHHHH------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeC
Q 025042          136 -----------SLFK--P-----SLSQVQDFLE------------------KRPPRLSPGIDELVKKLKANNKNVYLISG  179 (259)
Q Consensus       136 -----------~~~~--~-----~~~~i~~~~~------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg  179 (259)
                                 ..+.  +     ..+..+.+..                  ...+.+||++++.++.||+.|++++|+||
T Consensus       482 v~g~~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTG  561 (713)
T COG2217         482 VDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTG  561 (713)
T ss_pred             ECCEEEEEcCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcC
Confidence                       0000  0     0111111111                  12569999999999999999999999999


Q ss_pred             CccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          180 GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       180 ~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      |++..++.+++++|++  +++++.+                   |++|.+.+++++++ | +.|+|||||+||+|+|+.
T Consensus       562 Dn~~~A~~iA~~lGId--~v~Aell-------------------PedK~~~V~~l~~~-g-~~VamVGDGINDAPALA~  617 (713)
T COG2217         562 DNRRTAEAIAKELGID--EVRAELL-------------------PEDKAEIVRELQAE-G-RKVAMVGDGINDAPALAA  617 (713)
T ss_pred             CCHHHHHHHHHHcChH--hheccCC-------------------cHHHHHHHHHHHhc-C-CEEEEEeCCchhHHHHhh
Confidence            9999999999999997  8999864                   99999999999977 5 799999999999999975

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=99.96  E-value=3.3e-30  Score=239.75  Aligned_cols=228  Identities=16%  Similarity=0.187  Sum_probs=161.9

Q ss_pred             ccccccccccccccccccccchhh---------------hhhhccccceeeeeeeccCccchhhhccCcccccccccCCC
Q 025042            5 VRSQISPIGAHYKQQHSVFIPKFS---------------LKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSEN   69 (259)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~   69 (259)
                      +++||+|+++.+.-.+.++|+-..               -++.++   ++|.|.+|||++.|..+.+---+.+-+|++|+
T Consensus       492 ia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~a---isVlviACPCaLgLATPtAvmvatgvgA~nGv  568 (951)
T KOG0207|consen  492 IAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLA---ISVLVIACPCALGLATPTAVMVATGVGATNGV  568 (951)
T ss_pred             hhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhh---heEEEEECchhhhcCCceEEEEEechhhhcce
Confidence            589999999988877776665433               244444   68999999999888766555555688999999


Q ss_pred             CCCCHHHHHhccCcCEEEEeCCCcccccch-------------HHHHHHH---hc--CchhH-HHHHHHHcCCC------
Q 025042           70 TLPSKEVLQLWRTADAVCFDVDSTVCVDEG-------------IDELAEF---CG--AGKAV-AEWTARAMGGS------  124 (259)
Q Consensus        70 ~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-------------~~~l~~~---~~--~~~~~-~~~~~~~~~~~------  124 (259)
                      |+|+++.+|++.++++|+||||||||.+..             .+++...   ..  ..+++ .++.+......      
T Consensus       569 LIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak~~~~~~~~~  648 (951)
T KOG0207|consen  569 LIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAMESGSEHPIGKAIVDYAKEKLVEPNPE  648 (951)
T ss_pred             EEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHHHHhcCCcCchHHHHHHHHHhcccccCcc
Confidence            999999999999999999999999988731             1221111   11  12222 22222211000      


Q ss_pred             --CcHHHHHHH----------------HHhhcC----CCHHHHHHHHH----------------------hCCCCCCccH
Q 025042          125 --VPFEEALAA----------------RLSLFK----PSLSQVQDFLE----------------------KRPPRLSPGI  160 (259)
Q Consensus       125 --~~~~~~~~~----------------~~~~~~----~~~~~i~~~~~----------------------~~~~~~~p~~  160 (259)
                        .++.....+                ...++.    ...+.+++...                      ...+.+||++
T Consensus       649 ~~~~~~~~pg~g~~~~~~~~~~~i~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a  728 (951)
T KOG0207|consen  649 GVLSFEYFPGEGIYVTVTVDGNEVLIGNKEWMSRNGCSIPDDILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDA  728 (951)
T ss_pred             ccceeecccCCCcccceEEeeeEEeechHHHHHhcCCCCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhH
Confidence              011100000                000000    01122333321                      2357999999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042          161 DELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY  240 (259)
Q Consensus       161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~  240 (259)
                      ..+++.||++|++++|+|||+..+++.+++++|++  ++|++.+                   |++|.+.|++++++ + 
T Consensus       729 ~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--~V~aev~-------------------P~~K~~~Ik~lq~~-~-  785 (951)
T KOG0207|consen  729 ALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--NVYAEVL-------------------PEQKAEKIKEIQKN-G-  785 (951)
T ss_pred             HHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--eEEeccC-------------------chhhHHHHHHHHhc-C-
Confidence            99999999999999999999999999999999987  8999864                   99999999999998 4 


Q ss_pred             CeEEEEecCcccHHhhhc
Q 025042          241 KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~  258 (259)
                      ..|+|||||.||.|+|..
T Consensus       786 ~~VaMVGDGINDaPALA~  803 (951)
T KOG0207|consen  786 GPVAMVGDGINDAPALAQ  803 (951)
T ss_pred             CcEEEEeCCCCccHHHHh
Confidence            689999999999999975

>PLN02954 phosphoserine phosphatase

Probab=99.95  E-value=9.9e-27  Score=193.54  Aligned_cols=187  Identities=80%  Similarity=1.295  Sum_probs=160.6

Q ss_pred             CCHHHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHh
Q 025042           72 PSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEK  151 (259)
Q Consensus        72 ~~~~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  151 (259)
                      ++..++|.+.++|+|+||+||||++.+++..+.+.++.+.....+...+..+.+++.+.+...+.......+.+.+++..
T Consensus         1 ~~~~~~~~~~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (224)
T PLN02954          1 PSKDVLELWRSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEK   80 (224)
T ss_pred             ChHHHHHHHccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            46789999999999999999999999988888888887777777888888889999998888887776666667777776


Q ss_pred             CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       152 ~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ....++||+.+++++|+++|++++|+|++.+..++.+++.+|++..++|++.+.++.+|.+.|.....+.+.+.+|++.+
T Consensus        81 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i  160 (224)
T PLN02954         81 RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAV  160 (224)
T ss_pred             ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHH
Confidence            55678999999999999999999999999999999999999997546888888888888888876544444567899999


Q ss_pred             HHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      +++++++|.++++|||||.||+.|++.
T Consensus       161 ~~~~~~~~~~~~i~iGDs~~Di~aa~~  187 (224)
T PLN02954        161 QHIKKKHGYKTMVMIGDGATDLEARKP  187 (224)
T ss_pred             HHHHHHcCCCceEEEeCCHHHHHhhhc
Confidence            999998777789999999999999764

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.94  E-value=9.4e-26  Score=185.43  Aligned_cols=174  Identities=36%  Similarity=0.504  Sum_probs=154.7

Q ss_pred             cCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHH-HHHHHHHhCCCCCCcc
Q 025042           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS-QVQDFLEKRPPRLSPG  159 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~p~  159 (259)
                      .+.++++||+||||++.+.++.+....+.+..+..++.+.+.+..++.+.+..+...+.+.+. .++++.++. .+++|+
T Consensus         3 ~~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~~~-~~l~~g   81 (212)
T COG0560           3 RMKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEF-LRLTPG   81 (212)
T ss_pred             CccceEEEecccchhhHHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHHhc-CcCCcc
Confidence            467899999999999988899999999999999999999999999999999999999987654 455666654 689999


Q ss_pred             HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC
Q 025042          160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA  239 (259)
Q Consensus       160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g  239 (259)
                      +.+++++++++|++++++||+....++++++.+|++  .++++.+..++ |.++|...+.. +..+.|...++++++++|
T Consensus        82 a~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d--~~~an~l~~~d-G~ltG~v~g~~-~~~~~K~~~l~~~~~~~g  157 (212)
T COG0560          82 AEELVAALKAAGAKVVIISGGFTFLVEPIAERLGID--YVVANELEIDD-GKLTGRVVGPI-CDGEGKAKALRELAAELG  157 (212)
T ss_pred             HHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCc--hheeeEEEEeC-CEEeceeeeee-cCcchHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999998  89999999877 67777666544 556899999999999999


Q ss_pred             C--CeEEEEecCcccHHhhhcC
Q 025042          240 Y--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       240 ~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +  ++++++|||.||+||++.+
T Consensus       158 ~~~~~~~a~gDs~nDlpml~~a  179 (212)
T COG0560         158 IPLEETVAYGDSANDLPMLEAA  179 (212)
T ss_pred             CCHHHeEEEcCchhhHHHHHhC
Confidence            8  6999999999999999864

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.93  E-value=2.7e-24  Score=187.03  Aligned_cols=175  Identities=31%  Similarity=0.414  Sum_probs=151.0

Q ss_pred             ccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCcc
Q 025042           80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPG  159 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~  159 (259)
                      +++.++++||+||||+..++++++++.++.+..+..++++++.+++++.+.+..++..+++..+.+.+.+... .+++||
T Consensus       107 ~~~~~LvvfDmDGTLI~~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g~~~~il~~v~~~-l~l~pG  185 (322)
T PRK11133        107 LRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKGADANILQQVREN-LPLMPG  185 (322)
T ss_pred             ccCCCEEEEECCCCCcchHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCCHHHHHHHHHh-CCCChh
Confidence            4578999999999999999999999999999888899999999999999999988888887655543333332 568999


Q ss_pred             HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC
Q 025042          160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA  239 (259)
Q Consensus       160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g  239 (259)
                      +.++++.|++.|+++.|+|++....++.+.+++|++  .++++.+.+ .++.++|...++. ..+++|++.++++++++|
T Consensus       186 a~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld--~~~an~lei-~dg~ltg~v~g~i-v~~k~K~~~L~~la~~lg  261 (322)
T PRK11133        186 LTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD--AAVANELEI-MDGKLTGNVLGDI-VDAQYKADTLTRLAQEYE  261 (322)
T ss_pred             HHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC--eEEEeEEEE-ECCEEEeEecCcc-CCcccHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999997  888888877 4778877766643 345899999999999999


Q ss_pred             C--CeEEEEecCcccHHhhhcC
Q 025042          240 Y--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       240 ~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +  ++|++||||.||++|++.+
T Consensus       262 i~~~qtIaVGDg~NDl~m~~~A  283 (322)
T PRK11133        262 IPLAQTVAIGDGANDLPMIKAA  283 (322)
T ss_pred             CChhhEEEEECCHHHHHHHHHC
Confidence            8  7999999999999999753

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.93  E-value=2.2e-24  Score=172.75  Aligned_cols=172  Identities=31%  Similarity=0.521  Sum_probs=143.8

Q ss_pred             EEEEeCCCcccccch-HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCH-HHHHH-HHHhCCCCCCccHH
Q 025042           85 AVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQD-FLEKRPPRLSPGID  161 (259)
Q Consensus        85 ~vvFD~DGTLt~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~-~~~~~~~~~~p~~~  161 (259)
                      +++||+||||+..++ ...+....+.......+...+..+.+++.+.+......+.+.. +.+.+ ++... ..++|++.
T Consensus         1 l~~fD~DgTl~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~   79 (177)
T TIGR01488         1 LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRSEEVAKEFLARQ-VALRPGAR   79 (177)
T ss_pred             CEEecCccccccchhhHHHHHHHhCChHHHHHHHHHHHCCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHhc-CCcCcCHH
Confidence            379999999999887 4455555555456677888888999999999999988887665 45544 55554 56899999


Q ss_pred             HHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC-
Q 025042          162 ELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY-  240 (259)
Q Consensus       162 e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~-  240 (259)
                      ++++.++++|++++++|++....++.+++++|++  .++++.+.++++|.++|.....+.+.+.+|...++++++++|+ 
T Consensus        80 ~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~--~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~~~~~~~  157 (177)
T TIGR01488        80 ELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID--DVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEESKIT  157 (177)
T ss_pred             HHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc--hheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999998  8999999988888888766554456678999999999988776 


Q ss_pred             -CeEEEEecCcccHHhhhcC
Q 025042          241 -KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 -~~v~~vGDg~ND~~al~~v  259 (259)
                       ++++|||||.||++|++.+
T Consensus       158 ~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       158 LKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHHEEEEeCCHHHHHHHhcC
Confidence             7899999999999999864

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=99.92  E-value=1.9e-25  Score=209.83  Aligned_cols=198  Identities=16%  Similarity=0.211  Sum_probs=138.1

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHHH
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELAE  105 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~~  105 (259)
                      +++.|++|||+.+...+.+....+.+++++|+++|+++++|.++.++++|||||||||.++.            .+.+..
T Consensus       253 iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~  332 (679)
T PRK01122        253 VALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELAD  332 (679)
T ss_pred             HHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHH
Confidence            67789999998777666555566899999999999999999999999999999999998641            122221


Q ss_pred             ---HhcCc---hhHHHHHHHHcC--CC------------CcHHHHHHHH------HhhcCCCHH---------------H
Q 025042          106 ---FCGAG---KAVAEWTARAMG--GS------------VPFEEALAAR------LSLFKPSLS---------------Q  144 (259)
Q Consensus       106 ---~~~~~---~~~~~~~~~~~~--~~------------~~~~~~~~~~------~~~~~~~~~---------------~  144 (259)
                         .....   ..-.++......  +.            .+|....+..      ....++..+               .
T Consensus       333 ~a~~~s~~s~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~~g~~~~~~  412 (679)
T PRK01122        333 AAQLSSLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVESNGGHFPAE  412 (679)
T ss_pred             HHHHhcCCCCCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHhcCCcChHH
Confidence               11111   111122211110  00            0110000000      000011111               1


Q ss_pred             HH----HHHH------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeec
Q 025042          145 VQ----DFLE------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFAN  202 (259)
Q Consensus       145 i~----~~~~------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~  202 (259)
                      ++    ++..                  ...+++||++++.+++||++|++++|+|||+..+++.+++++|++  ++|++
T Consensus       413 ~~~~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--~v~A~  490 (679)
T PRK01122        413 LDAAVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFLAE  490 (679)
T ss_pred             HHHHHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--EEEcc
Confidence            11    1111                  123589999999999999999999999999999999999999997  78887


Q ss_pred             ceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          203 QLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       203 ~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      .                   .|++|.+.+++++++ | +.|+|+|||.||+||++.
T Consensus       491 ~-------------------~PedK~~iV~~lQ~~-G-~~VaMtGDGvNDAPALa~  525 (679)
T PRK01122        491 A-------------------TPEDKLALIRQEQAE-G-RLVAMTGDGTNDAPALAQ  525 (679)
T ss_pred             C-------------------CHHHHHHHHHHHHHc-C-CeEEEECCCcchHHHHHh
Confidence            4                   599999999999988 6 789999999999999986

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=99.92  E-value=2e-25  Score=209.45  Aligned_cols=199  Identities=12%  Similarity=0.155  Sum_probs=139.0

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccc-h-----------HHHHHH
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDE-G-----------IDELAE  105 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~-~-----------~~~l~~  105 (259)
                      +++.|+.+||+++.+++.+....+.+++++|+++|+++++|.++.++++|||||||||.++ .           .+++..
T Consensus       253 val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~  332 (673)
T PRK14010        253 IALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVK  332 (673)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHH
Confidence            5666788899999888776666789999999999999999999999999999999999853 1           112221


Q ss_pred             H---hcC--chh-HHHHHHHHcCCC----------CcHHHHHHH------HHhhcCCCHHH---------------H---
Q 025042          106 F---CGA--GKA-VAEWTARAMGGS----------VPFEEALAA------RLSLFKPSLSQ---------------V---  145 (259)
Q Consensus       106 ~---~~~--~~~-~~~~~~~~~~~~----------~~~~~~~~~------~~~~~~~~~~~---------------i---  145 (259)
                      .   +..  .++ ..++........          .+|......      .....++..+.               +   
T Consensus       333 ~a~~~~~~s~~P~~~AIv~~a~~~~~~~~~~~~~~~pF~~~~k~~gv~~~g~~i~kGa~~~il~~~~~~g~~~~~~~~~~  412 (673)
T PRK14010        333 AAYESSIADDTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTREVYKGAPNSMVKRVKEAGGHIPVDLDAL  412 (673)
T ss_pred             HHHHhcCCCCChHHHHHHHHHHHcCCCchhhhcceeccccccceeEEEECCEEEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence            1   111  111 112222111000          011000000      00000111111               1   


Q ss_pred             -HHHHH------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceee
Q 025042          146 -QDFLE------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLF  206 (259)
Q Consensus       146 -~~~~~------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~  206 (259)
                       +++-.                  ...+++||++++.+++||+.|++++|+|||+..++..+++++|++  ++|++.   
T Consensus       413 ~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--~v~A~~---  487 (673)
T PRK14010        413 VKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--RFVAEC---  487 (673)
T ss_pred             HHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--eEEcCC---
Confidence             11111                  124589999999999999999999999999999999999999997  788874   


Q ss_pred             cCCCceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          207 KSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       207 ~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                                      .|++|.++++.++++ | +.|+|+|||.||+||++..
T Consensus       488 ----------------~PedK~~iV~~lQ~~-G-~~VaMtGDGvNDAPALa~A  522 (673)
T PRK14010        488 ----------------KPEDKINVIREEQAK-G-HIVAMTGDGTNDAPALAEA  522 (673)
T ss_pred             ----------------CHHHHHHHHHHHHhC-C-CEEEEECCChhhHHHHHhC
Confidence                            599999999999987 6 7899999999999999863

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=99.91  E-value=1.2e-24  Score=204.18  Aligned_cols=199  Identities=15%  Similarity=0.164  Sum_probs=135.9

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHHH
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELAE  105 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~~  105 (259)
                      +++.|++|||+++...+.+....+.+++++|+++|+++++|.++.++++|||||||||.++.            .+++..
T Consensus       254 vallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~  333 (675)
T TIGR01497       254 VALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLAD  333 (675)
T ss_pred             HHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHH
Confidence            66788999997655444433345799999999999999999999999999999999998741            122222


Q ss_pred             H---hcC--chh-HHHHHHHHcCCCC-------------cHHHH--HH-----HHHhhcCCCHH---------------H
Q 025042          106 F---CGA--GKA-VAEWTARAMGGSV-------------PFEEA--LA-----ARLSLFKPSLS---------------Q  144 (259)
Q Consensus       106 ~---~~~--~~~-~~~~~~~~~~~~~-------------~~~~~--~~-----~~~~~~~~~~~---------------~  144 (259)
                      .   ...  .++ .+++.........             +|...  +.     ......++..+               .
T Consensus       334 ~aa~~~~~s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~~g~~~~~~  413 (675)
T TIGR01497       334 AAQLASLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEANGGHIPTD  413 (675)
T ss_pred             HHHHhcCCCCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHhcCCCCcHH
Confidence            1   111  111 1122221100000             00000  00     00000011111               1


Q ss_pred             H----HHHHH------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeec
Q 025042          145 V----QDFLE------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFAN  202 (259)
Q Consensus       145 i----~~~~~------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~  202 (259)
                      +    +++-.                  ...+.+||++++.+++|+++|++++|+|||+..+++.+++++|++  +++++
T Consensus       414 ~~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--~v~a~  491 (675)
T TIGR01497       414 LDQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--DFIAE  491 (675)
T ss_pred             HHHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--EEEcC
Confidence            1    11111                  124589999999999999999999999999999999999999997  77776


Q ss_pred             ceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          203 QLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       203 ~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      .                   .|++|.+.++.++++ | +.|+|+|||.||+||++.+
T Consensus       492 ~-------------------~PedK~~~v~~lq~~-g-~~VamvGDG~NDapAL~~A  527 (675)
T TIGR01497       492 A-------------------TPEDKIALIRQEQAE-G-KLVAMTGDGTNDAPALAQA  527 (675)
T ss_pred             C-------------------CHHHHHHHHHHHHHc-C-CeEEEECCCcchHHHHHhC
Confidence            3                   589999999999887 5 6899999999999999863

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.90  E-value=1.6e-22  Score=167.65  Aligned_cols=178  Identities=31%  Similarity=0.472  Sum_probs=141.7

Q ss_pred             HHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC-HHHHHHHHHhCCC
Q 025042           76 VLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQDFLEKRPP  154 (259)
Q Consensus        76 ~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~  154 (259)
                      +-+.++++++++||+||||++.+++..+....+.+.....+..++..+..++.+.+...+..+.+. .+.+.++...  .
T Consensus         7 ~~~~~~~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   84 (219)
T TIGR00338         7 LSPLLRSKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGLPVELLKEVREN--L   84 (219)
T ss_pred             chhhhccCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCHHHHHHHHhc--C
Confidence            345578999999999999999988888887777655555666677777888888877777666543 3344444444  4


Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      .++||+.++++.|+++|++++|+|++....++.+++.+|++  .+|++.+.++ ++.+++...... ..+++|+..++.+
T Consensus        85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~--~~~~~~~~~~-~~~~~~~~~~~~-~~~~~k~~~~~~~  160 (219)
T TIGR00338        85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD--AAFANRLEVE-DGKLTGLVEGPI-VDASYKGKTLLIL  160 (219)
T ss_pred             CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC--ceEeeEEEEE-CCEEEEEecCcc-cCCcccHHHHHHH
Confidence            68999999999999999999999999999999999999998  7888877774 566666554433 2346799999999


Q ss_pred             HHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          235 RKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       235 ~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ++++++  ++|+|||||.||+++++.+
T Consensus       161 ~~~~~~~~~~~i~iGDs~~Di~aa~~a  187 (219)
T TIGR00338       161 LRKEGISPENTVAVGDGANDLSMIKAA  187 (219)
T ss_pred             HHHcCCCHHHEEEEECCHHHHHHHHhC
Confidence            999887  7899999999999998753

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=99.90  E-value=4.7e-25  Score=205.84  Aligned_cols=198  Identities=18%  Similarity=0.245  Sum_probs=134.9

Q ss_pred             ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHH
Q 025042           37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELA  104 (259)
Q Consensus        37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~  104 (259)
                      .+++.|++|||++++.++.+-...+++++++|+++|+++++|.++++++++||||||||.++.            .+++.
T Consensus       231 ~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~l  310 (562)
T TIGR01511       231 AVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRDRTELL  310 (562)
T ss_pred             HHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCCHHHHH
Confidence            357788888888888777776777899999999999999999999999999999999998742            11111


Q ss_pred             HHh---c--CchhH-HHHHHHHcCCCCc------HHHHHHHHHh-hcC------CCHHHHH-------HHHH--------
Q 025042          105 EFC---G--AGKAV-AEWTARAMGGSVP------FEEALAARLS-LFK------PSLSQVQ-------DFLE--------  150 (259)
Q Consensus       105 ~~~---~--~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~-~~~------~~~~~i~-------~~~~--------  150 (259)
                      ..+   .  ..++. .++.+.......+      +.+.....+. ...      ++...+.       +...        
T Consensus       311 ~~aa~~e~~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~g~~~~iG~~~~~~~~~~~~~~~~~~g~~~~~~  390 (562)
T TIGR01511       311 ALAAALEAGSEHPLAKAIVSYAKEKGITLVEVSDFKAIPGIGVEGTVEGTKIQLGNEKLLGENAIKIDGKAEQGSTSVLV  390 (562)
T ss_pred             HHHHHHhccCCChHHHHHHHHHHhcCCCcCCCCCeEEECCceEEEEECCEEEEEECHHHHHhCCCCCChhhhCCCEEEEE
Confidence            111   0  11111 2222221110000      0000000000 000      0111110       0000        


Q ss_pred             ----------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCC
Q 025042          151 ----------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEP  220 (259)
Q Consensus       151 ----------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~  220 (259)
                                ...+.++|++.+++++|+++|++++|+||+++..++.+++++|++   +|++.                 
T Consensus       391 ~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---~~~~~-----------------  450 (562)
T TIGR01511       391 AVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---VRAEV-----------------  450 (562)
T ss_pred             EECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---EEccC-----------------
Confidence                      124589999999999999999999999999999999999999994   56542                 


Q ss_pred             CcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                        .|++|.+.+++++++ + ++|+|||||.||++|++.
T Consensus       451 --~p~~K~~~v~~l~~~-~-~~v~~VGDg~nD~~al~~  484 (562)
T TIGR01511       451 --LPDDKAALIKELQEK-G-RVVAMVGDGINDAPALAQ  484 (562)
T ss_pred             --ChHHHHHHHHHHHHc-C-CEEEEEeCCCccHHHHhh
Confidence              378999999999886 4 799999999999999975

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=99.89  E-value=7.7e-24  Score=206.09  Aligned_cols=200  Identities=16%  Similarity=0.154  Sum_probs=138.8

Q ss_pred             ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHH-H
Q 025042           37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDE-L  103 (259)
Q Consensus        37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~-l  103 (259)
                      .+++.|++|||++++.++.+-...+++++++|+++|+++++|.++++++++||||||||.++.            ... +
T Consensus       471 a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l  550 (834)
T PRK10671        471 ATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQAL  550 (834)
T ss_pred             HHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCCCHHHHH
Confidence            367889999999998888877777899999999999999999999999999999999988742            011 1


Q ss_pred             HHH--hc--CchhH-HHHHHHHcCCCC----cHHHHH-----------------HHHHhhcCCCHHH----HHHHHH---
Q 025042          104 AEF--CG--AGKAV-AEWTARAMGGSV----PFEEAL-----------------AARLSLFKPSLSQ----VQDFLE---  150 (259)
Q Consensus       104 ~~~--~~--~~~~~-~~~~~~~~~~~~----~~~~~~-----------------~~~~~~~~~~~~~----i~~~~~---  150 (259)
                      ...  +.  ..++. +++.+.......    ++.+..                 ...+....-..+.    ++++-.   
T Consensus       551 ~~a~~~e~~s~hp~a~Ai~~~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~  630 (834)
T PRK10671        551 RLAAALEQGSSHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQASQGA  630 (834)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHhhCCCCCcccceEecceEEEEEECCEEEEEeCHHHHHHcCCChHHHHHHHHHHHhCCC
Confidence            111  11  11111 222222110000    000000                 0000000000011    111111   


Q ss_pred             ---------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecc
Q 025042          151 ---------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGF  215 (259)
Q Consensus       151 ---------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~  215 (259)
                                     ...+.++|++.+.+++|++.|++++++|||++..++.+++++|++  ++|+..            
T Consensus       631 ~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--~~~~~~------------  696 (834)
T PRK10671        631 TPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID--EVIAGV------------  696 (834)
T ss_pred             eEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--EEEeCC------------
Confidence                           124589999999999999999999999999999999999999997  777653            


Q ss_pred             cCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          216 DANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       216 ~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                             .|++|.+++++++.+ + ++++|||||.||++|++.+
T Consensus       697 -------~p~~K~~~i~~l~~~-~-~~v~~vGDg~nD~~al~~A  731 (834)
T PRK10671        697 -------LPDGKAEAIKRLQSQ-G-RQVAMVGDGINDAPALAQA  731 (834)
T ss_pred             -------CHHHHHHHHHHHhhc-C-CEEEEEeCCHHHHHHHHhC
Confidence                   378899999999877 5 6999999999999999863

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=99.88  E-value=3.2e-23  Score=198.78  Aligned_cols=196  Identities=17%  Similarity=0.177  Sum_probs=127.7

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHHH
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELAE  105 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~~  105 (259)
                      +++.|++|||++.+.++.+-.....+++++|+++|+++++|.++++++++||||||||.++.            .+++..
T Consensus       391 ~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~  470 (741)
T PRK11033        391 LTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESELLA  470 (741)
T ss_pred             HHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCCHHHHHH
Confidence            56667777777644333333333688899999999999999999999999999999998741            112211


Q ss_pred             Hh---c--CchhH-HHHHHHHcCCCC--cHHHHHH----HHHh-hcC------CCH-------HH----HHHHHH-----
Q 025042          106 FC---G--AGKAV-AEWTARAMGGSV--PFEEALA----ARLS-LFK------PSL-------SQ----VQDFLE-----  150 (259)
Q Consensus       106 ~~---~--~~~~~-~~~~~~~~~~~~--~~~~~~~----~~~~-~~~------~~~-------~~----i~~~~~-----  150 (259)
                      ..   .  ..++. +++.+.......  ++.+...    ..+. ..+      +.+       +.    +.++-.     
T Consensus       471 ~aa~~e~~s~hPia~Ai~~~a~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~g~~~  550 (741)
T PRK11033        471 LAAAVEQGSTHPLAQAIVREAQVRGLAIPEAESQRALAGSGIEGQVNGERVLICAPGKLPPLADAFAGQINELESAGKTV  550 (741)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCCCCCCCcceEEEeeEEEEEEECCEEEEEecchhhhhccHHHHHHHHHHHhCCCEE
Confidence            11   1  11111 222222111000  0000000    0000 000      000       00    111111     


Q ss_pred             -------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccC
Q 025042          151 -------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA  217 (259)
Q Consensus       151 -------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~  217 (259)
                                   ...+++||++.+.+++|+++|++++|+|||+...++.+++++|++   ++++.              
T Consensus       551 v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---~~~~~--------------  613 (741)
T PRK11033        551 VLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---FRAGL--------------  613 (741)
T ss_pred             EEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---eecCC--------------
Confidence                         124589999999999999999999999999999999999999994   44432              


Q ss_pred             CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          218 NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       218 ~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                           .|++|.++++++++.   ++|+|+|||.||+||++.
T Consensus       614 -----~p~~K~~~v~~l~~~---~~v~mvGDgiNDapAl~~  646 (741)
T PRK11033        614 -----LPEDKVKAVTELNQH---APLAMVGDGINDAPAMKA  646 (741)
T ss_pred             -----CHHHHHHHHHHHhcC---CCEEEEECCHHhHHHHHh
Confidence                 478999999999864   589999999999999975

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.88  E-value=2.8e-21  Score=157.80  Aligned_cols=172  Identities=20%  Similarity=0.248  Sum_probs=127.9

Q ss_pred             CcCEEEEeCCCcccccch-HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCC-----CHHHHHHHHHhCCCC
Q 025042           82 TADAVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-----SLSQVQDFLEKRPPR  155 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~  155 (259)
                      |+|+++||+||||++.+. +..+...++.+.........+..+..++.+.+......+..     ..+.+.++...  ..
T Consensus         3 ~~k~viFD~DGTLid~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   80 (201)
T TIGR01491         3 MIKLIIFDLDGTLTDVMSSWEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSGRLRREEVEEIFKE--IS   80 (201)
T ss_pred             cceEEEEeCCCCCcCCccHHHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHHHHh--CC
Confidence            688999999999999654 44455556654333333345667788888776544333321     33445555544  46


Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR  235 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~  235 (259)
                      ++||+.++|+.|+++|++++|+|++....++.+++.+|++  .+|++.+.+++++...+..  .....+.+|.+.+++++
T Consensus        81 ~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~g~~~p~~--~~~~~~~~k~~~~~~~~  156 (201)
T TIGR01491        81 LRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD--YVYSNELVFDEKGFIQPDG--IVRVTFDNKGEAVERLK  156 (201)
T ss_pred             CCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC--eEEEEEEEEcCCCeEecce--eeEEccccHHHHHHHHH
Confidence            8999999999999999999999999999999999999987  7888777776655554321  11234568999999999


Q ss_pred             HHcCC--CeEEEEecCcccHHhhhcC
Q 025042          236 KAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       236 ~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +++|+  ++++|||||.||++|++.+
T Consensus       157 ~~~~~~~~~~i~iGDs~~D~~~a~~a  182 (201)
T TIGR01491       157 RELNPSLTETVAVGDSKNDLPMFEVA  182 (201)
T ss_pred             HHhCCCHHHEEEEcCCHhHHHHHHhc
Confidence            98887  7899999999999998764

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=99.88  E-value=4.3e-23  Score=198.35  Aligned_cols=221  Identities=16%  Similarity=0.188  Sum_probs=141.1

Q ss_pred             ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch-------------HHHH
Q 025042           37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-------------IDEL  103 (259)
Q Consensus        37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-------------~~~l  103 (259)
                      .+++.|+++||++|++++.+-...+.+++++|+++|+.+++|.++.++++|||||||||.++.             .+.+
T Consensus       240 ~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~  319 (755)
T TIGR01647       240 ALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDV  319 (755)
T ss_pred             HHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHH
Confidence            378889999999999998887777899999999999999999999999999999999988741             1111


Q ss_pred             HHH---hc---CchhH-HHHHHHHcC-----------CCCcHHHH-------H-----HHHHhhcCCCHHHH--------
Q 025042          104 AEF---CG---AGKAV-AEWTARAMG-----------GSVPFEEA-------L-----AARLSLFKPSLSQV--------  145 (259)
Q Consensus       104 ~~~---~~---~~~~~-~~~~~~~~~-----------~~~~~~~~-------~-----~~~~~~~~~~~~~i--------  145 (259)
                      ...   ..   .+++. .++......           ...+|...       .     .......+|.++.+        
T Consensus       320 l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~  399 (755)
T TIGR01647       320 LLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKK  399 (755)
T ss_pred             HHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcH
Confidence            111   11   11111 111111000           00011000       0     00000001211111        


Q ss_pred             ----------HHHHH-----------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc
Q 025042          146 ----------QDFLE-----------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL  192 (259)
Q Consensus       146 ----------~~~~~-----------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l  192 (259)
                                +++..                       ...+++||++++.++.|++.|+++.|+|||+..++..+++++
T Consensus       400 ~~~~~~~~~~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l  479 (755)
T TIGR01647       400 EIEEKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL  479 (755)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence                      11110                       013589999999999999999999999999999999999999


Q ss_pred             CCCCCcEeecceeecC------CCc---eecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          193 GIPPENIFANQLLFKS------SGE---FLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       193 gi~~~~~~~~~l~~~~------~~~---~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      |+....+-++.+....      ++.   +...........|++|.++++.++++ | +.|+|+|||.||+||++..
T Consensus       480 GI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G-~~VamvGDGvNDapAL~~A  553 (755)
T TIGR01647       480 GLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-G-HLVGMTGDGVNDAPALKKA  553 (755)
T ss_pred             CCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-C-CEEEEEcCCcccHHHHHhC
Confidence            9963111111110000      000   00000112335699999999999987 6 7999999999999999863

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=99.88  E-value=1.4e-23  Score=204.39  Aligned_cols=220  Identities=14%  Similarity=0.132  Sum_probs=139.4

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHHH
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELAE  105 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~~  105 (259)
                      ++++|+++||++|++++......+.+++++|+++|+.+++|.++.++++|||||||||.++.            .+.+..
T Consensus       326 lsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~  405 (902)
T PRK10517        326 LSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLH  405 (902)
T ss_pred             HHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHH
Confidence            67889999999999998887777889999999999999999999999999999999988742            111211


Q ss_pred             Hhc--------CchhH-HHHHH------------HHcC-CCCcH-------------------------HHHHHH-----
Q 025042          106 FCG--------AGKAV-AEWTA------------RAMG-GSVPF-------------------------EEALAA-----  133 (259)
Q Consensus       106 ~~~--------~~~~~-~~~~~------------~~~~-~~~~~-------------------------~~~~~~-----  133 (259)
                      ...        .++.. .++..            .+.. .+.+|                         .+.+..     
T Consensus       406 ~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~  485 (902)
T PRK10517        406 SAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQV  485 (902)
T ss_pred             HHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhh
Confidence            100        01110 00000            0000 00000                         000000     


Q ss_pred             -------------------HHhhc--CCCH------H-------H----HH---HHHH--hCCCCCCccHHHHHHHHHHC
Q 025042          134 -------------------RLSLF--KPSL------S-------Q----VQ---DFLE--KRPPRLSPGIDELVKKLKAN  170 (259)
Q Consensus       134 -------------------~~~~~--~~~~------~-------~----i~---~~~~--~~~~~~~p~~~e~l~~Lk~~  170 (259)
                                         ....+  .+.+      .       .    .+   .++.  ...+++||++++.++.|++.
T Consensus       486 ~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~a  565 (902)
T PRK10517        486 RHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKAS  565 (902)
T ss_pred             hcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHC
Confidence                               00000  0000      0       0    00   0000  12468999999999999999


Q ss_pred             CCcEEEEeCCccccHHHHHHHcCCCCCcEee-cceeecCCCce---ecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEE
Q 025042          171 NKNVYLISGGFRHMINPIASVLGIPPENIFA-NQLLFKSSGEF---LGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMI  246 (259)
Q Consensus       171 g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~-~~l~~~~~~~~---~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~v  246 (259)
                      |+++.|+|||+..++..+++++|++.+.+.. ..+..-+++.+   ...........|++|.++++.++++ | +.|+|+
T Consensus       566 GI~v~miTGD~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~-G-~vVam~  643 (902)
T PRK10517        566 GVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKRE-G-HVVGFM  643 (902)
T ss_pred             CCEEEEEcCCCHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHC-C-CEEEEE
Confidence            9999999999999999999999996332221 11110000000   0000112235699999999999987 7 799999


Q ss_pred             ecCcccHHhhhcC
Q 025042          247 GDGATDLEVSIFI  259 (259)
Q Consensus       247 GDg~ND~~al~~v  259 (259)
                      |||.||+||++..
T Consensus       644 GDGvNDaPALk~A  656 (902)
T PRK10517        644 GDGINDAPALRAA  656 (902)
T ss_pred             CCCcchHHHHHhC
Confidence            9999999999863

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=99.87  E-value=1.2e-22  Score=198.18  Aligned_cols=220  Identities=15%  Similarity=0.181  Sum_probs=138.4

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccchH------------HHHHH
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGI------------DELAE  105 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~~------------~~l~~  105 (259)
                      ++++|+++||++|++++.+-...+.+++++|+++|+..++|.++.++++|||||||||.+++.            +.+..
T Consensus       324 isl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~  403 (903)
T PRK15122        324 LAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQ  403 (903)
T ss_pred             HHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHH
Confidence            678899999999999988766667889999999999999999999999999999999887411            11221


Q ss_pred             Hh---c-----CchhH-HHHHHHHcC-------------CCCcH-------------------------HHHHHHHHhhc
Q 025042          106 FC---G-----AGKAV-AEWTARAMG-------------GSVPF-------------------------EEALAARLSLF  138 (259)
Q Consensus       106 ~~---~-----~~~~~-~~~~~~~~~-------------~~~~~-------------------------~~~~~~~~~~~  138 (259)
                      ..   .     .+++. .++......             .+.+|                         .+.+.......
T Consensus       404 ~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~  483 (903)
T PRK15122        404 LAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHV  483 (903)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhh
Confidence            11   0     01111 111110000             00000                         00000000000


Q ss_pred             --CC-----C---HHHH----HHH---------------------------HH---------hCCCCCCccHHHHHHHHH
Q 025042          139 --KP-----S---LSQV----QDF---------------------------LE---------KRPPRLSPGIDELVKKLK  168 (259)
Q Consensus       139 --~~-----~---~~~i----~~~---------------------------~~---------~~~~~~~p~~~e~l~~Lk  168 (259)
                        .+     .   ++.+    +++                           .+         ...+++||++++.++.|+
T Consensus       484 ~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~  563 (903)
T PRK15122        484 RDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALR  563 (903)
T ss_pred             hcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHH
Confidence              00     0   0000    000                           00         124589999999999999


Q ss_pred             HCCCcEEEEeCCccccHHHHHHHcCCCCCcEe-ecceeecCCCce---ecccCCCCCcCCCChHHHHHHHHHHcCCCeEE
Q 025042          169 ANNKNVYLISGGFRHMINPIASVLGIPPENIF-ANQLLFKSSGEF---LGFDANEPTSRSGGKAAAVQQIRKAHAYKVLA  244 (259)
Q Consensus       169 ~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~-~~~l~~~~~~~~---~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~  244 (259)
                      +.|+++.|+|||+..++.++++++|+..+++. +..+..-+++.+   ...........|++|..+++.++++ | +.|+
T Consensus       564 ~aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~-G-~vVa  641 (903)
T PRK15122        564 ENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQAN-G-HTVG  641 (903)
T ss_pred             HCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhC-C-CEEE
Confidence            99999999999999999999999999632211 111100000000   0000112235699999999999987 7 7999


Q ss_pred             EEecCcccHHhhhcC
Q 025042          245 MIGDGATDLEVSIFI  259 (259)
Q Consensus       245 ~vGDg~ND~~al~~v  259 (259)
                      |+|||.||+||++..
T Consensus       642 mtGDGvNDaPALk~A  656 (903)
T PRK15122        642 FLGDGINDAPALRDA  656 (903)
T ss_pred             EECCCchhHHHHHhC
Confidence            999999999999863

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=99.87  E-value=2.3e-22  Score=195.79  Aligned_cols=220  Identities=16%  Similarity=0.151  Sum_probs=139.7

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch------------HHHHHH
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG------------IDELAE  105 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~------------~~~l~~  105 (259)
                      ++++|+++||++|++++.+....+.+++++|+++|+.+++|.++.++++|||||||||.++.            .+.+..
T Consensus       291 l~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~  370 (867)
T TIGR01524       291 LAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLK  370 (867)
T ss_pred             HHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHH
Confidence            67889999999999998887777889999999999999999999999999999999988742            122221


Q ss_pred             Hhc--------CchhH-HHHHHHHcC-------------CCCcH-------------------------HHHHHHHHhh-
Q 025042          106 FCG--------AGKAV-AEWTARAMG-------------GSVPF-------------------------EEALAARLSL-  137 (259)
Q Consensus       106 ~~~--------~~~~~-~~~~~~~~~-------------~~~~~-------------------------~~~~~~~~~~-  137 (259)
                      .+.        .+++. .++......             ...+|                         .+.+...... 
T Consensus       371 ~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~  450 (867)
T TIGR01524       371 MAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHK  450 (867)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhh
Confidence            110        01111 111110000             00000                         0000000000 


Q ss_pred             -cCC-----C---HHHHH----H--------------------------------HHH--hCCCCCCccHHHHHHHHHHC
Q 025042          138 -FKP-----S---LSQVQ----D--------------------------------FLE--KRPPRLSPGIDELVKKLKAN  170 (259)
Q Consensus       138 -~~~-----~---~~~i~----~--------------------------------~~~--~~~~~~~p~~~e~l~~Lk~~  170 (259)
                       ..+     .   .+.+.    +                                ++.  ...+++||++++.+++|++.
T Consensus       451 ~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~a  530 (867)
T TIGR01524       451 RFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKN  530 (867)
T ss_pred             hcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHC
Confidence             000     0   00000    0                                000  01458999999999999999


Q ss_pred             CCcEEEEeCCccccHHHHHHHcCCCCCcEee-cceeecCCCcee---cccCCCCCcCCCChHHHHHHHHHHcCCCeEEEE
Q 025042          171 NKNVYLISGGFRHMINPIASVLGIPPENIFA-NQLLFKSSGEFL---GFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMI  246 (259)
Q Consensus       171 g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~-~~l~~~~~~~~~---g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~v  246 (259)
                      |+++.|+|||+..++..+++++|+..+++.. ..+..-.+..+.   ..........|++|.++++.++++ | +.|+|+
T Consensus       531 GI~vvmiTGD~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G-~vVam~  608 (867)
T TIGR01524       531 GINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKA-G-HTVGFL  608 (867)
T ss_pred             CCEEEEEcCCCHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhC-C-CEEEEE
Confidence            9999999999999999999999996322221 111100000000   000112235699999999999987 6 799999


Q ss_pred             ecCcccHHhhhcC
Q 025042          247 GDGATDLEVSIFI  259 (259)
Q Consensus       247 GDg~ND~~al~~v  259 (259)
                      |||.||+||++.+
T Consensus       609 GDGvNDapALk~A  621 (867)
T TIGR01524       609 GDGINDAPALRKA  621 (867)
T ss_pred             CCCcccHHHHHhC
Confidence            9999999999863

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=99.86  E-value=3.4e-22  Score=185.87  Aligned_cols=198  Identities=18%  Similarity=0.163  Sum_probs=138.3

Q ss_pred             ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccchH------HH-HHHHhc-
Q 025042           37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGI------DE-LAEFCG-  108 (259)
Q Consensus        37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~~------~~-l~~~~~-  108 (259)
                      .+++.+++|||++++.++.+....+.+++++|+++|+++++|.+++++++|||||||||.++..      .+ +..... 
T Consensus       200 ~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~l~~a~~~  279 (536)
T TIGR01512       200 ALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAA  279 (536)
T ss_pred             HHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHHHHHHHHHHH
Confidence            3678889999999998888777778999999999999999999999999999999999987521      11 111111 


Q ss_pred             ---CchhH-HHHHHHHcCCCCcHHHH---HHHHHhh-cC------CCHHHHH-----HHH----------------H--h
Q 025042          109 ---AGKAV-AEWTARAMGGSVPFEEA---LAARLSL-FK------PSLSQVQ-----DFL----------------E--K  151 (259)
Q Consensus       109 ---~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~-~~------~~~~~i~-----~~~----------------~--~  151 (259)
                         ..++. .++.+...... ++.+.   ....+.. .+      ++.+.+.     .+.                .  .
T Consensus       280 e~~~~hp~~~Ai~~~~~~~~-~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~i~  358 (536)
T TIGR01512       280 EQASSHPLARAIVDYARKRE-NVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVGARPESAGKTIVHVARDGTYLGYIL  358 (536)
T ss_pred             hccCCCcHHHHHHHHHHhcC-CCcceEEecCCeEEEEECCeEEEEcCHHHHhhcCCcchhhCCCeEEEEEECCEEEEEEE
Confidence               11111 22222111000 00000   0000000 00      1111110     000                0  1


Q ss_pred             CCCCCCccHHHHHHHHHHCCC-cEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042          152 RPPRLSPGIDELVKKLKANNK-NVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA  230 (259)
Q Consensus       152 ~~~~~~p~~~e~l~~Lk~~g~-~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~  230 (259)
                      ..+.++||+.+++++|+++|+ +++++||+++..++.+++++|++  ++|+..                   .|++|.+.
T Consensus       359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--~~f~~~-------------------~p~~K~~~  417 (536)
T TIGR01512       359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--EVHAEL-------------------LPEDKLEI  417 (536)
T ss_pred             EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--hhhhcc-------------------CcHHHHHH
Confidence            245899999999999999999 99999999999999999999997  677653                   37899999


Q ss_pred             HHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          231 VQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       231 v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      +++++++ + ++++|+|||.||++|++.
T Consensus       418 i~~l~~~-~-~~v~~vGDg~nD~~al~~  443 (536)
T TIGR01512       418 VKELREK-Y-GPVAMVGDGINDAPALAA  443 (536)
T ss_pred             HHHHHhc-C-CEEEEEeCCHHHHHHHHh
Confidence            9999887 4 799999999999999985

.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.86  E-value=1.2e-20  Score=154.41  Aligned_cols=159  Identities=18%  Similarity=0.296  Sum_probs=127.0

Q ss_pred             CEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC--C-CHHHHHHHHHhCCCCCCccH
Q 025042           84 DAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--P-SLSQVQDFLEKRPPRLSPGI  160 (259)
Q Consensus        84 k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~i~~~~~~~~~~~~p~~  160 (259)
                      .+++||+||||++. .|..+....+.....     ....+...+.+++..+...++  + ..+.+++++..  .+++||+
T Consensus         2 ~la~FDlD~TLi~~-~w~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~~--i~l~pga   73 (203)
T TIGR02137         2 EIACLDLEGVLVPE-IWIAFAEKTGIDALK-----ATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIAT--LKPLEGA   73 (203)
T ss_pred             eEEEEeCCcccHHH-HHHHHHHHcCCcHHH-----HHhcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHh--CCCCccH
Confidence            46999999999975 577777766643321     223566788999988887774  3 45667777765  4789999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042          161 DELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY  240 (259)
Q Consensus       161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~  240 (259)
                      .++++++++++ +++|+||+....++++++++|++  ++|++.+.++++|.++|...    ..+.+|...++.+++. | 
T Consensus        74 ~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~~~----~~~~~K~~~l~~l~~~-~-  144 (203)
T TIGR02137        74 VEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQL----RQKDPKRQSVIAFKSL-Y-  144 (203)
T ss_pred             HHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc--hhhceeeEEecCCeeECeee----cCcchHHHHHHHHHhh-C-
Confidence            99999999975 99999999999999999999998  89999888865577777643    2456899999999654 5 


Q ss_pred             CeEEEEecCcccHHhhhcC
Q 025042          241 KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~v  259 (259)
                      .+++|||||.||++|++.+
T Consensus       145 ~~~v~vGDs~nDl~ml~~A  163 (203)
T TIGR02137       145 YRVIAAGDSYNDTTMLSEA  163 (203)
T ss_pred             CCEEEEeCCHHHHHHHHhC
Confidence            5899999999999999864

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.85  E-value=6.2e-20  Score=152.30  Aligned_cols=171  Identities=21%  Similarity=0.347  Sum_probs=128.7

Q ss_pred             cCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCH-HHHHHHHHhCCCCCCccHH
Q 025042           83 ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEKRPPRLSPGID  161 (259)
Q Consensus        83 ~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~p~~~  161 (259)
                      -++++||+||||++.+....+.+.++. .....+.++++.+++++.+.+...+..+.... +++.+++... ..++||+.
T Consensus         3 ~~~vifDfDgTi~~~d~~~~~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~l~pG~~   80 (219)
T PRK09552          3 SIQIFCDFDGTITNNDNIIAIMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLLET-AEIREGFH   80 (219)
T ss_pred             CcEEEEcCCCCCCcchhhHHHHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHHhC-CCcCcCHH
Confidence            348999999999998876654444433 34567788888999999999999998887553 5555655443 57999999


Q ss_pred             HHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCC----cCCCChHHHHHHHHHH
Q 025042          162 ELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPT----SRSGGKAAAVQQIRKA  237 (259)
Q Consensus       162 e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~----~~~~~K~~~v~~l~~~  237 (259)
                      +++++|+++|++++|+|++....++.+++++ +..+.++++...++.++....++.+.+.    ..+..|..+++++...
T Consensus        81 e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~  159 (219)
T PRK09552         81 EFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSDT  159 (219)
T ss_pred             HHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhccC
Confidence            9999999999999999999999999999998 7644577777666544433333332211    0124588888887655


Q ss_pred             cCCCeEEEEecCcccHHhhhc
Q 025042          238 HAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       238 ~g~~~v~~vGDg~ND~~al~~  258 (259)
                      .  .+++|||||.||++|++.
T Consensus       160 ~--~~~i~iGDs~~Di~aa~~  178 (219)
T PRK09552        160 N--DFHIVIGDSITDLEAAKQ  178 (219)
T ss_pred             C--CCEEEEeCCHHHHHHHHH
Confidence            3  689999999999999875

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=99.85  E-value=7.5e-22  Score=184.52  Aligned_cols=199  Identities=17%  Similarity=0.214  Sum_probs=139.0

Q ss_pred             ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch--------------HHH
Q 025042           37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG--------------IDE  102 (259)
Q Consensus        37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~--------------~~~  102 (259)
                      .+++.+++|||+++++++.+....+.+++++|+++|+++++|.++.++++|||||||||.++.              .++
T Consensus       200 ~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~  279 (556)
T TIGR01525       200 ALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEE  279 (556)
T ss_pred             HHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHH
Confidence            467888999999999888888888899999999999999999999999999999999988631              122


Q ss_pred             HHHHhc-----CchhH-HHHHHHHcCCCCc------HHHHHHHHHhh-cCC-------CHH--------------HHHHH
Q 025042          103 LAEFCG-----AGKAV-AEWTARAMGGSVP------FEEALAARLSL-FKP-------SLS--------------QVQDF  148 (259)
Q Consensus       103 l~~~~~-----~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~-~~~-------~~~--------------~i~~~  148 (259)
                      +...+.     ..++. .++.........+      +.+........ .++       +.+              .+..+
T Consensus       280 ~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  359 (556)
T TIGR01525       280 LLALAAALEQSSSHPLARAIVRYAKKRGLELPKQEDVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISASPDLLNEG  359 (556)
T ss_pred             HHHHHHHHhccCCChHHHHHHHHHHhcCCCcccccCeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhhHHHHHHH
Confidence            221111     11111 2222211100000      00000000000 000       001              01111


Q ss_pred             HH------------------hCCCCCCccHHHHHHHHHHCC-CcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCC
Q 025042          149 LE------------------KRPPRLSPGIDELVKKLKANN-KNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSS  209 (259)
Q Consensus       149 ~~------------------~~~~~~~p~~~e~l~~Lk~~g-~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~  209 (259)
                      -.                  ...+.++||+.+++++|+++| +++.++||+++..++.+++++|++  ++|+..      
T Consensus       360 ~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--~~f~~~------  431 (556)
T TIGR01525       360 ESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--EVHAEL------  431 (556)
T ss_pred             hhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--eeeccC------
Confidence            11                  113589999999999999999 999999999999999999999997  777753      


Q ss_pred             CceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          210 GEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       210 ~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                                   .|++|.+.++++++. + ++|+|+|||.||++|++.
T Consensus       432 -------------~p~~K~~~v~~l~~~-~-~~v~~vGDg~nD~~al~~  465 (556)
T TIGR01525       432 -------------LPEDKLAIVKELQEE-G-GVVAMVGDGINDAPALAA  465 (556)
T ss_pred             -------------CHHHHHHHHHHHHHc-C-CEEEEEECChhHHHHHhh
Confidence                         378999999999876 4 699999999999999975

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=99.84  E-value=5.2e-21  Score=188.13  Aligned_cols=105  Identities=21%  Similarity=0.212  Sum_probs=76.8

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc--Ee-ecceeecCCCce---ecccCCCCCcCCCC
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN--IF-ANQLLFKSSGEF---LGFDANEPTSRSGG  226 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~--~~-~~~l~~~~~~~~---~g~~~~~~~~~~~~  226 (259)
                      .+++||++++.++.|++.|++++|+|||+..++..+++++|+...+  +. +..+..-.++.+   ...........|++
T Consensus       577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~  656 (941)
T TIGR01517       577 KDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLD  656 (941)
T ss_pred             cCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHH
Confidence            4589999999999999999999999999999999999999996311  11 111100000000   00001112356999


Q ss_pred             hHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          227 KAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       227 K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      |.++++.++++ | +.|+|+|||.||+||++..
T Consensus       657 K~~iV~~lq~~-g-~vVam~GDGvNDapALk~A  687 (941)
T TIGR01517       657 KQLLVLMLKDM-G-EVVAVTGDGTNDAPALKLA  687 (941)
T ss_pred             HHHHHHHHHHC-C-CEEEEECCCCchHHHHHhC
Confidence            99999999987 6 6999999999999999863

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.84  E-value=1.8e-19  Score=149.02  Aligned_cols=167  Identities=17%  Similarity=0.317  Sum_probs=129.3

Q ss_pred             EEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCH-HHHHHHHHhCCCCCCccHHHHH
Q 025042           86 VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEKRPPRLSPGIDELV  164 (259)
Q Consensus        86 vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~p~~~e~l  164 (259)
                      ++||+|||||..++...+.+.+.. +....+...++.+++++.+.+..++..+.... +.+.+++.. ...++||+.+++
T Consensus         2 ~~fDFDgTit~~d~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~l~pg~~e~l   79 (214)
T TIGR03333         2 IICDFDGTITNNDNIISIMKQFAP-PEWEALKDGVLSKTLSIQEGVGRMFGLLPSSLKEEITSFVLE-TAEIREGFREFV   79 (214)
T ss_pred             EEeccCCCCCcchhHHHHHHHhCc-HHHHHHHHHHHcCCccHHHHHHHHHhhCCCchHHHHHHHHHh-cCcccccHHHHH
Confidence            799999999999987766655443 45567777888889999999998998887653 567777655 368999999999


Q ss_pred             HHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCC-----CcCCCChHHHHHHHHHHcC
Q 025042          165 KKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEP-----TSRSGGKAAAVQQIRKAHA  239 (259)
Q Consensus       165 ~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~-----~~~~~~K~~~v~~l~~~~g  239 (259)
                      +.|+++|++++|+|++....++.+++.++.. +.++++.+.+++++....++.+.+     .| +..|..+++++.... 
T Consensus        80 ~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~-~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~c-g~~K~~~l~~~~~~~-  156 (214)
T TIGR03333        80 AFINEHGIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNEADFSNEYIHIDWPHPCDGTCQNQC-GCCKPSLIRKLSEPN-  156 (214)
T ss_pred             HHHHHCCCeEEEECCCcHHHHHHHHHhhCCc-ccEEeceeEeeCCeeEEeCCCCCccccccCC-CCCHHHHHHHHhhcC-
Confidence            9999999999999999999999999987543 367787777754433222222221     12 457999999987653 


Q ss_pred             CCeEEEEecCcccHHhhhc
Q 025042          240 YKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       240 ~~~v~~vGDg~ND~~al~~  258 (259)
                       ++++|||||.||++|++.
T Consensus       157 -~~~i~iGDg~~D~~~a~~  174 (214)
T TIGR03333       157 -DYHIVIGDSVTDVEAAKQ  174 (214)
T ss_pred             -CcEEEEeCCHHHHHHHHh
Confidence             689999999999999875

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=99.82  E-value=1.9e-20  Score=183.21  Aligned_cols=105  Identities=23%  Similarity=0.296  Sum_probs=75.8

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCC--cE-eecceeecCCCce---ecccCCCCCcCCCC
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPE--NI-FANQLLFKSSGEF---LGFDANEPTSRSGG  226 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~--~~-~~~~l~~~~~~~~---~g~~~~~~~~~~~~  226 (259)
                      .+++||+++++++.|++.|+++.|+|||+..++..+++++|+...  .+ -+..+..-++..+   ...........|++
T Consensus       526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~  605 (884)
T TIGR01522       526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH  605 (884)
T ss_pred             cCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence            358999999999999999999999999999999999999999621  01 0111100000000   00001112246899


Q ss_pred             hHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          227 KAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       227 K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      |..+++.+++. | +.|+|+|||.||+||++..
T Consensus       606 K~~iv~~lq~~-g-~~v~mvGDGvND~pAl~~A  636 (884)
T TIGR01522       606 KMKIVKALQKR-G-DVVAMTGDGVNDAPALKLA  636 (884)
T ss_pred             HHHHHHHHHHC-C-CEEEEECCCcccHHHHHhC
Confidence            99999999887 6 7999999999999999863

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.82  E-value=1.5e-18  Score=140.03  Aligned_cols=170  Identities=18%  Similarity=0.308  Sum_probs=122.9

Q ss_pred             EEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCC--CCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHHH
Q 025042           85 AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGG--SVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDE  162 (259)
Q Consensus        85 ~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~e  162 (259)
                      +++||+||||++.+....+.+.++.. ....+...+..+  ..++.+.+...+.......+.+.+++..  ..++|++.+
T Consensus         3 ~iiFD~dgTL~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~g~~~   79 (188)
T TIGR01489         3 VVVSDFDGTITLNDSDDWITDKFGPP-EANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLKS--APIDPGFKE   79 (188)
T ss_pred             EEEEeCCCcccCCCchHHHHHhcCcc-hhhHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHHh--CCCCccHHH
Confidence            68999999999988777777766532 333444444332  3344455444444333345556666655  478999999


Q ss_pred             HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCC--CcEeecceeecCCCceecccCCC----CCcCCCChHHHHHHHHH
Q 025042          163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIPP--ENIFANQLLFKSSGEFLGFDANE----PTSRSGGKAAAVQQIRK  236 (259)
Q Consensus       163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~--~~~~~~~l~~~~~~~~~g~~~~~----~~~~~~~K~~~v~~l~~  236 (259)
                      +++.|+++|++++++|++....++.+++++|+..  +.++++...++.+|.+.+.....    ....+..|.+.++++++
T Consensus        80 ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~  159 (188)
T TIGR01489        80 FIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCKGKVIHKLSE  159 (188)
T ss_pred             HHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCHHHHHHHHHh
Confidence            9999999999999999999999999999999862  24566666677777777655442    22234579999999988


Q ss_pred             HcCCCeEEEEecCcccHHhhhc
Q 025042          237 AHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       237 ~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      ++. ++++|||||.||++|++.
T Consensus       160 ~~~-~~~i~iGD~~~D~~aa~~  180 (188)
T TIGR01489       160 PKY-QHIIYIGDGVTDVCPAKL  180 (188)
T ss_pred             hcC-ceEEEECCCcchhchHhc
Confidence            732 799999999999999875

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.81  E-value=6.5e-19  Score=144.14  Aligned_cols=172  Identities=19%  Similarity=0.276  Sum_probs=120.4

Q ss_pred             EEEEeCCCcccccchHHHHHHHh-cCchhH-----H---HHHHHHcCCCCcHHHHHHHHH-hhcCC-CHHHHH----HHH
Q 025042           85 AVCFDVDSTVCVDEGIDELAEFC-GAGKAV-----A---EWTARAMGGSVPFEEALAARL-SLFKP-SLSQVQ----DFL  149 (259)
Q Consensus        85 ~vvFD~DGTLt~~~~~~~l~~~~-~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~i~----~~~  149 (259)
                      +++||+||||+++++...+.... ..+...     .   .....+.....+..+...... ..+.+ +.+.+.    ++.
T Consensus         1 ~a~FD~DgTL~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~   80 (202)
T TIGR01490         1 LAFFDFDGTLTAKDTLFIFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEEFV   80 (202)
T ss_pred             CeEEccCCCCCCCchHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            37999999999988765555432 222110     0   111112221222233332222 23343 333333    333


Q ss_pred             Hh-CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChH
Q 025042          150 EK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKA  228 (259)
Q Consensus       150 ~~-~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~  228 (259)
                      .. ....++|++.++++.++++|++++++|++....++.+++++|++  +++++.+.++++|.++|...+ +.+.+++|.
T Consensus        81 ~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~--~~~~~~l~~~~~g~~~g~~~~-~~~~g~~K~  157 (202)
T TIGR01490        81 NQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID--NAIGTRLEESEDGIYTGNIDG-NNCKGEGKV  157 (202)
T ss_pred             HHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc--ceEecceEEcCCCEEeCCccC-CCCCChHHH
Confidence            32 23468999999999999999999999999999999999999997  889988887778888887654 335678899


Q ss_pred             HHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          229 AAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       229 ~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..++++.+++++  ++++++|||.+|+||++.+
T Consensus       158 ~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a  190 (202)
T TIGR01490       158 HALAELLAEEQIDLKDSYAYGDSISDLPLLSLV  190 (202)
T ss_pred             HHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhC
Confidence            999999998887  6899999999999999864

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.81  E-value=1.2e-18  Score=142.82  Aligned_cols=159  Identities=21%  Similarity=0.355  Sum_probs=122.1

Q ss_pred             cCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHhCCCCCCcc
Q 025042           83 ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK---PSLSQVQDFLEKRPPRLSPG  159 (259)
Q Consensus        83 ~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~p~  159 (259)
                      +++++||+||||+.. .+..+.+.++..+. .    .+..+..++.+.+..++..+.   -..+.+......  ..++||
T Consensus         1 ~~~v~FD~DGTL~~~-~~~~~~~~~g~~~~-~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~--~~~~pg   72 (205)
T PRK13582          1 MEIVCLDLEGVLVPE-IWIAFAEKTGIPEL-R----ATTRDIPDYDVLMKQRLDILDEHGLGLADIQEVIAT--LDPLPG   72 (205)
T ss_pred             CeEEEEeCCCCChhh-HHHHHHHHcCChHH-H----HHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHh--CCCCCC
Confidence            578999999999964 55666666664332 1    123455677777777776654   234556666665  468999


Q ss_pred             HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC
Q 025042          160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA  239 (259)
Q Consensus       160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g  239 (259)
                      +.++++.|+++ ++++++|++....++.+++++|++  .+|++.+.+++++.+.+...    ..|.+|...++.+... +
T Consensus        73 ~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~i~~~~~----~~p~~k~~~l~~~~~~-~  144 (205)
T PRK13582         73 AVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWP--TLFCHSLEVDEDGMITGYDL----RQPDGKRQAVKALKSL-G  144 (205)
T ss_pred             HHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCc--hhhcceEEECCCCeEECccc----cccchHHHHHHHHHHh-C
Confidence            99999999999 999999999999999999999997  78888887777777766552    2367888898888765 4


Q ss_pred             CCeEEEEecCcccHHhhhc
Q 025042          240 YKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       240 ~~~v~~vGDg~ND~~al~~  258 (259)
                       .+++|||||.||++|++.
T Consensus       145 -~~~v~iGDs~~D~~~~~a  162 (205)
T PRK13582        145 -YRVIAAGDSYNDTTMLGE  162 (205)
T ss_pred             -CeEEEEeCCHHHHHHHHh
Confidence             799999999999999865

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=99.81  E-value=2.2e-20  Score=182.61  Aligned_cols=220  Identities=20%  Similarity=0.288  Sum_probs=143.3

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch-------H------H---
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-------I------D---  101 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-------~------~---  101 (259)
                      ++++|+.+|||+|++++..-...+.+.+++++++++-.+.|.+++++.+|+|||||||.+++       .      +   
T Consensus       303 v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~  382 (917)
T COG0474         303 LALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKD  382 (917)
T ss_pred             HHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccc
Confidence            68899999999999999988888999999999999999999999999999999999988632       0      0   


Q ss_pred             --------HHHH---Hhc-----------CchhH-HHHHHHHcC-----------------CCCcH--------------
Q 025042          102 --------ELAE---FCG-----------AGKAV-AEWTARAMG-----------------GSVPF--------------  127 (259)
Q Consensus       102 --------~l~~---~~~-----------~~~~~-~~~~~~~~~-----------------~~~~~--------------  127 (259)
                              .+..   .+.           .+.+. .++......                 .+.+|              
T Consensus       383 ~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~  462 (917)
T COG0474         383 LKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTD  462 (917)
T ss_pred             cccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcC
Confidence                    0111   111           01100 011110000                 00011              


Q ss_pred             -----------HHHHHHHHhh---------------------c------------C---CCH-----HHHHH---HHH--
Q 025042          128 -----------EEALAARLSL---------------------F------------K---PSL-----SQVQD---FLE--  150 (259)
Q Consensus       128 -----------~~~~~~~~~~---------------------~------------~---~~~-----~~i~~---~~~--  150 (259)
                                 .+.+..+...                     +            +   ...     +..+.   +..  
T Consensus       463 ~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~  542 (917)
T COG0474         463 EGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLT  542 (917)
T ss_pred             CCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhh
Confidence                       0111100000                     0            0   000     00000   110  


Q ss_pred             hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc----Ee-ecceeecCCCc---eecccCCCCCc
Q 025042          151 KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN----IF-ANQLLFKSSGE---FLGFDANEPTS  222 (259)
Q Consensus       151 ~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~----~~-~~~l~~~~~~~---~~g~~~~~~~~  222 (259)
                      ...+++|+++++.++.|+++|+++.|+|||+..++..+++++|+..+.    +. +..+..-.+..   ...........
T Consensus       543 g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARv  622 (917)
T COG0474         543 GIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARV  622 (917)
T ss_pred             hccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEc
Confidence            125699999999999999999999999999999999999999986432    11 22221111111   11111233456


Q ss_pred             CCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          223 RSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      .|++|..+++.|++. | +.|+|.|||.||+||++.+
T Consensus       623 sP~qK~~IV~~lq~~-g-~vVamtGDGvNDapALk~A  657 (917)
T COG0474         623 SPEQKARIVEALQKS-G-HVVAMTGDGVNDAPALKAA  657 (917)
T ss_pred             CHHHHHHHHHHHHhC-C-CEEEEeCCCchhHHHHHhc
Confidence            799999999999998 7 7999999999999999863

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=99.80  E-value=2e-20  Score=173.08  Aligned_cols=196  Identities=19%  Similarity=0.194  Sum_probs=134.4

Q ss_pred             ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccchH-HHHH--H-HhcCchh
Q 025042           37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGI-DELA--E-FCGAGKA  112 (259)
Q Consensus        37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~~-~~l~--~-~~~~~~~  112 (259)
                      .+++.+.+||+++++.++.+-.....+++++|+++|+++.+|.+++++++|||||||||.++.. ..+.  . ....+++
T Consensus       184 ~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~s~hp  263 (499)
T TIGR01494       184 ALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGGEYLSGHP  263 (499)
T ss_pred             HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCCCcCCCCh
Confidence            3678888999999988877777778999999999999999999999999999999999987521 0000  0 0011111


Q ss_pred             H-HHHHHHHcCC---CCcHHHHHHHH--------HhhcCCCHHHH-----------HHHHH------------------h
Q 025042          113 V-AEWTARAMGG---SVPFEEALAAR--------LSLFKPSLSQV-----------QDFLE------------------K  151 (259)
Q Consensus       113 ~-~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~i-----------~~~~~------------------~  151 (259)
                      . .++.+.....   ..++.......        -....++.+.+           .++..                  .
T Consensus       264 ~~~ai~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~g~i~  343 (499)
T TIGR01494       264 DERALVKSAKWKILNVFEFSSVRKRMSVIVRGPDGTYVKGAPEFVLSRVKDLEEKVKELAQSGLRVLAVASKETLLGLLG  343 (499)
T ss_pred             HHHHHHHHhhhcCcceeccCCCCceEEEEEecCCcEEEeCCHHHHHHhhHHHHHHHHHHHhCCCEEEEEEECCeEEEEEE
Confidence            1 1121111100   00111000000        00011222111           11111                  1


Q ss_pred             CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       152 ~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ..+.++|++.+++++|++.|++++|+|||+..++..+++++|+     ++.                   ..|++|.+.+
T Consensus       344 l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-----~~~-------------------~~p~~K~~~v  399 (499)
T TIGR01494       344 LEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-----FAR-------------------VTPEEKAALV  399 (499)
T ss_pred             ecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-----eec-------------------cCHHHHHHHH
Confidence            2368999999999999999999999999999999999999987     222                   3589999999


Q ss_pred             HHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      ++++++ | ..++|+|||.||+||++.
T Consensus       400 ~~l~~~-g-~~v~~vGDg~nD~~al~~  424 (499)
T TIGR01494       400 EALQKK-G-RVVAMTGDGVNDAPALKK  424 (499)
T ss_pred             HHHHHC-C-CEEEEECCChhhHHHHHh
Confidence            999877 5 689999999999999875

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=99.78  E-value=7.4e-19  Score=163.03  Aligned_cols=98  Identities=21%  Similarity=0.285  Sum_probs=78.0

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccC---------------
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA---------------  217 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~---------------  217 (259)
                      .+++||++++.++.+++.|+++.|+|||+..++.++++++|+..++   +.+   ....++|...               
T Consensus       582 ~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~---ed~---~~~~~TG~efD~ls~~~~~~~~~~~  655 (972)
T KOG0202|consen  582 LDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSED---EDV---SSMALTGSEFDDLSDEELDDAVRRV  655 (972)
T ss_pred             cCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCC---ccc---cccccchhhhhcCCHHHHHHHhhcc
Confidence            3589999999999999999999999999999999999999985211   000   1112233222               


Q ss_pred             -CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          218 -NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       218 -~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                       ....+.|.+|.++++.|++. | +-|+|-|||+||+||||.
T Consensus       656 ~vFaR~~P~HK~kIVeaLq~~-g-eivAMTGDGVNDApALK~  695 (972)
T KOG0202|consen  656 LVFARAEPQHKLKIVEALQSR-G-EVVAMTGDGVNDAPALKK  695 (972)
T ss_pred             eEEEecCchhHHHHHHHHHhc-C-CEEEecCCCccchhhhhh
Confidence             12456799999999999998 6 899999999999999986

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=99.77  E-value=6.4e-19  Score=155.88  Aligned_cols=83  Identities=24%  Similarity=0.358  Sum_probs=76.9

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      .+.+.||.+|-+++||+.|++.+|+|||++-++..++++.|+|  ++.++                   +.|++|.+.++
T Consensus       445 kDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD--dfiAe-------------------atPEdK~~~I~  503 (681)
T COG2216         445 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFIAE-------------------ATPEDKLALIR  503 (681)
T ss_pred             hhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch--hhhhc-------------------CChHHHHHHHH
Confidence            3578999999999999999999999999999999999999998  77777                   57999999999


Q ss_pred             HHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      +-+++ | +-|+|.|||.||+|+++.
T Consensus       504 ~eQ~~-g-rlVAMtGDGTNDAPALAq  527 (681)
T COG2216         504 QEQAE-G-RLVAMTGDGTNDAPALAQ  527 (681)
T ss_pred             HHHhc-C-cEEEEcCCCCCcchhhhh
Confidence            99998 6 799999999999999975

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=99.76  E-value=5.7e-17  Score=125.93  Aligned_cols=169  Identities=18%  Similarity=0.339  Sum_probs=136.6

Q ss_pred             EEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHHHHH
Q 025042           85 AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELV  164 (259)
Q Consensus        85 ~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~e~l  164 (259)
                      .++.|+|||+|-.+..+.+...++.++. ..+.+....+.+++.+++.+++..+..+.+++.+++... ..++|+.++++
T Consensus         5 vi~sDFDGTITl~Ds~~~itdtf~~~e~-k~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~llk~-i~Idp~fKef~   82 (220)
T COG4359           5 VIFSDFDGTITLNDSNDYITDTFGPGEW-KALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFLLKD-IKIDPGFKEFV   82 (220)
T ss_pred             EEEecCCCceEecchhHHHHhccCchHH-HHHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHHHhh-cccCccHHHHH
Confidence            4666999999999988999988887664 377777888899999999999999988888888777764 57899999999


Q ss_pred             HHHHHCCCcEEEEeCCccccHHHHHHHcC----CCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042          165 KKLKANNKNVYLISGGFRHMINPIASVLG----IPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY  240 (259)
Q Consensus       165 ~~Lk~~g~~v~ivTg~~~~~~~~i~~~lg----i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~  240 (259)
                      ++.++++++++++|++....+.++.+.++    +..-+.+.+...++.+|...-....+. .-+-+|...|+.+.+.+  
T Consensus        83 e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds-~fG~dK~~vI~~l~e~~--  159 (220)
T COG4359          83 EWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDS-QFGHDKSSVIHELSEPN--  159 (220)
T ss_pred             HHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCcc-ccCCCcchhHHHhhcCC--
Confidence            99999999999999999999999998776    332245555555656665543333332 23578999999999886  


Q ss_pred             CeEEEEecCcccHHhhhc
Q 025042          241 KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~  258 (259)
                      +.++|+|||+.|+.|++.
T Consensus       160 e~~fy~GDsvsDlsaakl  177 (220)
T COG4359         160 ESIFYCGDSVSDLSAAKL  177 (220)
T ss_pred             ceEEEecCCcccccHhhh
Confidence            689999999999999874

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.75  E-value=5.7e-19  Score=145.25  Aligned_cols=88  Identities=25%  Similarity=0.375  Sum_probs=72.3

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCCh--HHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGK--AAA  230 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K--~~~  230 (259)
                      .++++|++.++|+.|+++|++++|+|||+...+..+++++|++...+|+...                 ..|.+|  ..+
T Consensus       125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~-----------------~kP~~k~~~~~  187 (215)
T PF00702_consen  125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI-----------------GKPEPKIFLRI  187 (215)
T ss_dssp             EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE-----------------TTTHHHHHHHH
T ss_pred             cCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccccccccccc-----------------ccccchhHHHH
Confidence            3579999999999999999999999999999999999999997333777631                 147777  666


Q ss_pred             HHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          231 VQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       231 v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      ++.++.+.  ++|+|||||.||++|++.+
T Consensus       188 i~~l~~~~--~~v~~vGDg~nD~~al~~A  214 (215)
T PF00702_consen  188 IKELQVKP--GEVAMVGDGVNDAPALKAA  214 (215)
T ss_dssp             HHHHTCTG--GGEEEEESSGGHHHHHHHS
T ss_pred             HHHHhcCC--CEEEEEccCHHHHHHHHhC
Confidence            66655332  6999999999999999863

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=99.74  E-value=8.8e-19  Score=174.09  Aligned_cols=61  Identities=13%  Similarity=0.067  Sum_probs=57.0

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccc
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDE   98 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~   98 (259)
                      +++.++.+|+++|++++.+....+.++++++++++++..+|.+++++++|||||||||.++
T Consensus       403 l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~  463 (1054)
T TIGR01657       403 LDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDG  463 (1054)
T ss_pred             HHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCC
Confidence            6788899999999999888888899999999999999999999999999999999998874

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=99.74  E-value=8.2e-18  Score=166.28  Aligned_cols=61  Identities=11%  Similarity=0.199  Sum_probs=55.8

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccc
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDE   98 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~   98 (259)
                      +++.|+++||++|++++.+....+.+++++|+++|+.+++|.++.++++|||||||||.++
T Consensus       299 i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~  359 (997)
T TIGR01106       299 IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR  359 (997)
T ss_pred             HHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCc
Confidence            5678889999999988887777788999999999999999999999999999999998764

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=99.71  E-value=3.4e-17  Score=160.78  Aligned_cols=105  Identities=16%  Similarity=0.221  Sum_probs=75.2

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc------Eee-cceeecCCCc---eecccCCCCCc
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN------IFA-NQLLFKSSGE---FLGFDANEPTS  222 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~------~~~-~~l~~~~~~~---~~g~~~~~~~~  222 (259)
                      .+++||++++.++.|++.|++++|+|||+..++..+++++|+...+      .+. ..+..-.+..   ...........
T Consensus       535 ~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~  614 (917)
T TIGR01116       535 LDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRV  614 (917)
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEec
Confidence            3579999999999999999999999999999999999999995311      111 0000000000   00000111234


Q ss_pred             CCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          223 RSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      .|++|..+++.+++. | +.|+|+|||.||+||++.+
T Consensus       615 ~P~~K~~iV~~lq~~-g-~~va~iGDG~ND~~alk~A  649 (917)
T TIGR01116       615 EPSHKSELVELLQEQ-G-EIVAMTGDGVNDAPALKKA  649 (917)
T ss_pred             CHHHHHHHHHHHHhc-C-CeEEEecCCcchHHHHHhC
Confidence            688999999998865 6 7999999999999999863

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=99.71  E-value=3.2e-17  Score=162.26  Aligned_cols=105  Identities=20%  Similarity=0.209  Sum_probs=77.5

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccC---------------
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA---------------  217 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~---------------  217 (259)
                      .+++||++++.++.+++.|++++|+|||+..++..+++++|+...+.....-....+..++|...               
T Consensus       644 ~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~  723 (1053)
T TIGR01523       644 YDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC  723 (1053)
T ss_pred             ecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence            35899999999999999999999999999999999999999953221110000000011122111               


Q ss_pred             -CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          218 -NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       218 -~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                       ......|++|.++++.++++ | +.|+|+|||.||+||++..
T Consensus       724 ~V~ar~sP~~K~~iV~~lq~~-g-~~Vam~GDGvNDapaLk~A  764 (1053)
T TIGR01523       724 LVIARCAPQTKVKMIEALHRR-K-AFCAMTGDGVNDSPSLKMA  764 (1053)
T ss_pred             eEEEecCHHHHHHHHHHHHhc-C-CeeEEeCCCcchHHHHHhC
Confidence             12345689999999999987 6 7899999999999999853

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.71  E-value=2.1e-16  Score=130.14  Aligned_cols=172  Identities=16%  Similarity=0.160  Sum_probs=109.1

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcCchhHH-----HHHH-----HHcCCCCcHHHHHHHHHhhcCC-CHHHH----H
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVA-----EWTA-----RAMGGSVPFEEALAARLSLFKP-SLSQV----Q  146 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~i----~  146 (259)
                      ..++++||+|||||+.++...+...........     ....     ....+..+......-....+.+ +.+.+    .
T Consensus         4 ~~~la~FDfDgTLt~~ds~~~fl~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~   83 (210)
T TIGR01545         4 AKRIIFFDLDGTLHQQDMFGSFLRFLLRHLPLNALLVIPLLPIIAIALLIGGRAARWPMSLLLWACTFGHREAHLQDLEA   83 (210)
T ss_pred             cCcEEEEcCCCCCccCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHcCCCHHHHHHHHH
Confidence            457899999999999988776655544211110     0000     0001111111110001112222 22222    3


Q ss_pred             HHHHhC--CCCCCccHHHHHH-HHHHCCCcEEEEeCCccccHHHHHHHcCC-CCCcEeecceeecCCCceecccCCCCCc
Q 025042          147 DFLEKR--PPRLSPGIDELVK-KLKANNKNVYLISGGFRHMINPIASVLGI-PPENIFANQLLFKSSGEFLGFDANEPTS  222 (259)
Q Consensus       147 ~~~~~~--~~~~~p~~~e~l~-~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi-~~~~~~~~~l~~~~~~~~~g~~~~~~~~  222 (259)
                      +|.+..  ...++|++.++|+ .++++|++++|+|+..+..++++++..++ ..+++.++.++..+.|.+.|     +.|
T Consensus        84 ~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g-----~~c  158 (210)
T TIGR01545        84 DFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLP-----LRC  158 (210)
T ss_pred             HHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcC-----ccC
Confidence            343321  1357999999996 77889999999999999999999988544 11378888888754444433     347


Q ss_pred             CCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          223 RSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      .++.|...++++... ....++++|||.||+||++.+
T Consensus       159 ~g~~Kv~rl~~~~~~-~~~~~~aYsDS~~D~pmL~~a  194 (210)
T TIGR01545       159 LGHEKVAQLEQKIGS-PLKLYSGYSDSKQDNPLLAFC  194 (210)
T ss_pred             CChHHHHHHHHHhCC-ChhheEEecCCcccHHHHHhC
Confidence            788999999988753 336789999999999999865

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.70  E-value=3.5e-16  Score=129.91  Aligned_cols=92  Identities=16%  Similarity=0.268  Sum_probs=78.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|++|+++|++++++|+..+..++.+++++|+.  .+|.....            .+....+++++..+..
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~--~~F~~i~g------------~~~~~~~KP~P~~l~~  153 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLA--DYFDVIVG------------GDDVPPPKPDPEPLLL  153 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCc--cccceEEc------------CCCCCCCCcCHHHHHH
Confidence            468999999999999999999999999999999999999997  66665431            1112346788999999


Q ss_pred             HHHHcCCC--eEEEEecCcccHHhhhcC
Q 025042          234 IRKAHAYK--VLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~~--~v~~vGDg~ND~~al~~v  259 (259)
                      +++++|.+  +++||||+.+|+.|++.+
T Consensus       154 ~~~~~~~~~~~~l~VGDs~~Di~aA~~A  181 (220)
T COG0546         154 LLEKLGLDPEEALMVGDSLNDILAAKAA  181 (220)
T ss_pred             HHHHhCCChhheEEECCCHHHHHHHHHc
Confidence            99999984  899999999999999853

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.70  E-value=1.2e-15  Score=126.38  Aligned_cols=169  Identities=20%  Similarity=0.278  Sum_probs=127.4

Q ss_pred             EEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHhCCCCCCccHH
Q 025042           85 AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK---PSLSQVQDFLEKRPPRLSPGID  161 (259)
Q Consensus        85 ~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~p~~~  161 (259)
                      +++||+|+||++.++...+.+.++.+.....+...+..  ..+.+.+...+..+.   -..+.+.+.++.  .++.|++.
T Consensus         2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~--~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~--ip~~pgm~   77 (234)
T PF06888_consen    2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPK--GGWTEYMDRVLQLLHEQGVTPEDIRDALRS--IPIDPGMK   77 (234)
T ss_pred             EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhccc--cchHHHHHHHHHHHHHcCCCHHHHHHHHHc--CCCCccHH
Confidence            68999999999999888888888766544555555543  244566666555553   356777777776  57899999


Q ss_pred             HHHHHH--HHCCCcEEEEeCCccccHHHHHHHcCCCC--CcEeecceeecCCCceecccCC---CCCcCC-CChHHHHHH
Q 025042          162 ELVKKL--KANNKNVYLISGGFRHMINPIASVLGIPP--ENIFANQLLFKSSGEFLGFDAN---EPTSRS-GGKAAAVQQ  233 (259)
Q Consensus       162 e~l~~L--k~~g~~v~ivTg~~~~~~~~i~~~lgi~~--~~~~~~~l~~~~~~~~~g~~~~---~~~~~~-~~K~~~v~~  233 (259)
                      ++++.+  ++.|+.++|+|.++..+++.+++..|+..  .++|++...++++|.+.-...-   ...|.+ -.|..++++
T Consensus        78 ~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmCK~~il~~  157 (234)
T PF06888_consen   78 ELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMCKGKILER  157 (234)
T ss_pred             HHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccchHHHHHH
Confidence            999999  45799999999999999999999999863  3578888888888876432221   223332 479999999


Q ss_pred             HHHHc---CC--CeEEEEecCcccHHhhh
Q 025042          234 IRKAH---AY--KVLAMIGDGATDLEVSI  257 (259)
Q Consensus       234 l~~~~---g~--~~v~~vGDg~ND~~al~  257 (259)
                      +++..   |.  ++++|||||.||...+.
T Consensus       158 ~~~~~~~~g~~~~rviYiGDG~nD~Cp~~  186 (234)
T PF06888_consen  158 LLQEQAQRGVPYDRVIYIGDGRNDFCPAL  186 (234)
T ss_pred             HHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence            99873   43  89999999999987653

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PRK11590 hypothetical protein; Provisional

Probab=99.69  E-value=7.9e-16  Score=126.97  Aligned_cols=172  Identities=16%  Similarity=0.135  Sum_probs=107.6

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHh-c-Cchh---HHHHHHHHcCCCCcHHHH-H-H--H-HHhhcCC-CHHHH----H
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFC-G-AGKA---VAEWTARAMGGSVPFEEA-L-A--A-RLSLFKP-SLSQV----Q  146 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~-~-~~~~---~~~~~~~~~~~~~~~~~~-~-~--~-~~~~~~~-~~~~i----~  146 (259)
                      ..++++||+||||++.++...+...+ . .+..   ...+...+..+....... . .  . ......+ +.+.+    +
T Consensus         5 ~~k~~iFD~DGTL~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   84 (211)
T PRK11590          5 ERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARLQALEA   84 (211)
T ss_pred             cceEEEEecCCCCcccchHHHHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHHHHHHH
Confidence            45799999999999877666655554 2 1111   111111111111111111 0 0  0 0001112 22222    2


Q ss_pred             HHHHhC--CCCCCccHHHHH-HHHHHCCCcEEEEeCCccccHHHHHHHcCCC-CCcEeecceeecCCCceecccCCCCCc
Q 025042          147 DFLEKR--PPRLSPGIDELV-KKLKANNKNVYLISGGFRHMINPIASVLGIP-PENIFANQLLFKSSGEFLGFDANEPTS  222 (259)
Q Consensus       147 ~~~~~~--~~~~~p~~~e~l-~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~-~~~~~~~~l~~~~~~~~~g~~~~~~~~  222 (259)
                      .|....  ...++||+.++| +.+++.|++++++|+..+..++++++.+|+. .+++.++.+...    ++|...+ +.|
T Consensus        85 ~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~----~tg~~~g-~~c  159 (211)
T PRK11590         85 DFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRR----YGGWVLT-LRC  159 (211)
T ss_pred             HHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEE----EccEECC-ccC
Confidence            332211  145799999999 5688899999999999999999999999941 127888887653    4444433 336


Q ss_pred             CCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          223 RSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      .++.|...++++... ....++++|||.||+||++.+
T Consensus       160 ~g~~K~~~l~~~~~~-~~~~~~aY~Ds~~D~pmL~~a  195 (211)
T PRK11590        160 LGHEKVAQLERKIGT-PLRLYSGYSDSKQDNPLLYFC  195 (211)
T ss_pred             CChHHHHHHHHHhCC-CcceEEEecCCcccHHHHHhC
Confidence            788999999988742 226789999999999999865

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.69  E-value=6.2e-16  Score=130.68  Aligned_cols=174  Identities=14%  Similarity=0.178  Sum_probs=112.2

Q ss_pred             CCCCCHHHHHhccCcCEEEEeCCCcccccch-----HHHHHHHhcC--c--hhHHHHHHHHcCCCCcHHHHHHHHHhhc-
Q 025042           69 NTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-----IDELAEFCGA--G--KAVAEWTARAMGGSVPFEEALAARLSLF-  138 (259)
Q Consensus        69 ~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-----~~~l~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  138 (259)
                      ..+.+.+++...+++++|+||+||||+++..     +..+.+..+.  +  .........+ .+. +..+.+....... 
T Consensus         8 ~~~~~~~~~~~~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~-~G~-~~~~~~~~~~~~~~   85 (248)
T PLN02770          8 NSVESKSSLSGLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENI-AGK-HNEDIALGLFPDDL   85 (248)
T ss_pred             ccccccccccccCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHc-CCC-CHHHHHHHHcCcch
Confidence            3455667788889999999999999998753     2222233321  1  1111111121 222 2332222211100 


Q ss_pred             CCC---HHHHHHHHH---hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCce
Q 025042          139 KPS---LSQVQDFLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEF  212 (259)
Q Consensus       139 ~~~---~~~i~~~~~---~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~  212 (259)
                      ...   ......+..   .....++||+.++|++|+++|++++|+|+..+..++..++++|+.  ++|...+..      
T Consensus        86 ~~~~~~~~~~~~~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~--~~Fd~iv~~------  157 (248)
T PLN02770         86 ERGLKFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS--DFFQAVIIG------  157 (248)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh--hhCcEEEec------
Confidence            000   011111111   123678999999999999999999999999999999999999997  556443211      


Q ss_pred             ecccCCCCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          213 LGFDANEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       213 ~g~~~~~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                            +....++++++.+...++++|+  ++++||||+.+|+.+++.
T Consensus       158 ------~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~  199 (248)
T PLN02770        158 ------SECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVA  199 (248)
T ss_pred             ------CcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHH
Confidence                  1112367888999999999987  789999999999999875

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.69  E-value=1e-15  Score=127.20  Aligned_cols=92  Identities=15%  Similarity=0.140  Sum_probs=77.4

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|+.|+++|++++++|+.....++.+++++++.  ++|...+..            +....++++++.++
T Consensus        90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~--~~f~~~~~~------------~~~~~~Kp~~~~~~  155 (222)
T PRK10826         90 TRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR--DYFDALASA------------EKLPYSKPHPEVYL  155 (222)
T ss_pred             CCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch--hcccEEEEc------------ccCCCCCCCHHHHH
Confidence            3579999999999999999999999999999999999999997  666543311            01123577888999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+++++|+  ++|+||||+.+|+++++.
T Consensus       156 ~~~~~~~~~~~~~~~igDs~~Di~aA~~  183 (222)
T PRK10826        156 NCAAKLGVDPLTCVALEDSFNGMIAAKA  183 (222)
T ss_pred             HHHHHcCCCHHHeEEEcCChhhHHHHHH
Confidence            99999998  899999999999999875

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.67  E-value=1.3e-15  Score=125.71  Aligned_cols=91  Identities=13%  Similarity=0.150  Sum_probs=76.7

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++++|+..+..++.+++.+|+.  .+|...+..+            ....+++|++.+++
T Consensus        81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~--~~f~~i~~~~------------~~~~~Kp~p~~~~~  146 (214)
T PRK13288         81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD--EFFDVVITLD------------DVEHAKPDPEPVLK  146 (214)
T ss_pred             cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh--hceeEEEecC------------cCCCCCCCcHHHHH
Confidence            468999999999999999999999999999999999999997  6665543211            11235788999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|.  ++++||||+.+|+.+++.
T Consensus       147 ~~~~~~~~~~~~~~iGDs~~Di~aa~~  173 (214)
T PRK13288        147 ALELLGAKPEEALMVGDNHHDILAGKN  173 (214)
T ss_pred             HHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence            9999887  789999999999999875

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.66  E-value=1.7e-15  Score=128.66  Aligned_cols=161  Identities=18%  Similarity=0.227  Sum_probs=105.1

Q ss_pred             cCcCEEEEeCCCcccccc-hHH--HHH---HHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHH---H----HHH
Q 025042           81 RTADAVCFDVDSTVCVDE-GID--ELA---EFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS---Q----VQD  147 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~-~~~--~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----i~~  147 (259)
                      ..+++|+||+||||+++. ...  .+.   +..+...........+.+  .+..+.+...+.. ....+   .    ...
T Consensus        22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G--~~~~~~~~~l~~~-~~~~~~~~~l~~~~~~   98 (260)
T PLN03243         22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEG--MKNEQAISEVLCW-SRDFLQMKRLAIRKED   98 (260)
T ss_pred             CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHhcc-CCCHHHHHHHHHHHHH
Confidence            468999999999999874 222  233   333332222223233322  2223332222111 11111   1    111


Q ss_pred             ---HHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCC
Q 025042          148 ---FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRS  224 (259)
Q Consensus       148 ---~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~  224 (259)
                         +.......++||+.++|+.|+++|++++|+|+.....++.+++++|+.  .+|...+..            +....+
T Consensus        99 ~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~--~~Fd~ii~~------------~d~~~~  164 (260)
T PLN03243         99 LYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME--GFFSVVLAA------------EDVYRG  164 (260)
T ss_pred             HHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH--hhCcEEEec------------ccCCCC
Confidence               112223578999999999999999999999999999999999999996  555443211            111235


Q ss_pred             CChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          225 GGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       225 ~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++.+...++++|+  ++++||||+.+|+.+++.
T Consensus       165 KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~  200 (260)
T PLN03243        165 KPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHD  200 (260)
T ss_pred             CCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH
Confidence            7889999999999998  789999999999999875

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=99.66  E-value=3.8e-16  Score=126.38  Aligned_cols=96  Identities=33%  Similarity=0.525  Sum_probs=74.7

Q ss_pred             ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCC-CceecccCCCCCcCCCChHHHHHHH--
Q 025042          158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSS-GEFLGFDANEPTSRSGGKAAAVQQI--  234 (259)
Q Consensus       158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~-~~~~g~~~~~~~~~~~~K~~~v~~l--  234 (259)
                      |++.+++++++++|++++|+|++....++++++.+|++..+++++.+ .+++ +...+...+.. . . +|...++++  
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~~~~~~~~~~~~~~-~-~-~K~~~l~~~~~  167 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDNGGGIFTGRITGSN-C-G-GKAEALKELYI  167 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECTTCCEEEEEEEEEE-E-S-HHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eecccceeeeeECCCC-C-C-cHHHHHHHHHH
Confidence            66669999999999999999999999999999999998555888888 5444 33334332210 0 1 599999999  


Q ss_pred             -HH-HcCCCeEEEEecCcccHHhhh
Q 025042          235 -RK-AHAYKVLAMIGDGATDLEVSI  257 (259)
Q Consensus       235 -~~-~~g~~~v~~vGDg~ND~~al~  257 (259)
                       .. ..+...+++||||.||+||++
T Consensus       168 ~~~~~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  168 RDEEDIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred             HhhcCCCCCeEEEEECCHHHHHHhC
Confidence             33 223379999999999999986

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.66  E-value=2e-15  Score=126.04  Aligned_cols=91  Identities=12%  Similarity=0.132  Sum_probs=74.6

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.+++++|+++|+++.++|++....++.+++++|+.  +.|.....        +    +....++++++.+.+
T Consensus        94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~--~~f~~i~~--------~----~~~~~~KP~p~~~~~  159 (229)
T PRK13226         94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE--QRCAVLIG--------G----DTLAERKPHPLPLLV  159 (229)
T ss_pred             CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch--hcccEEEe--------c----CcCCCCCCCHHHHHH
Confidence            578999999999999999999999999998888899999986  55532210        0    111235788999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++++||||+.+|+.+++.
T Consensus       160 ~~~~l~~~p~~~l~IGDs~~Di~aA~~  186 (229)
T PRK13226        160 AAERIGVAPTDCVYVGDDERDILAARA  186 (229)
T ss_pred             HHHHhCCChhhEEEeCCCHHHHHHHHH
Confidence            9999998  889999999999999875

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.64  E-value=8.9e-15  Score=121.50  Aligned_cols=93  Identities=18%  Similarity=0.315  Sum_probs=75.6

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++++.|++.|++++++|++.....+.+++++|+.  .+|...+.            .+.....+++++.++
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~--~~f~~~~~------------~~~~~~~kp~~~~~~  156 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA--DYFSVVIG------------GDSLPNKKPDPAPLL  156 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc--cCccEEEc------------CCCCCCCCcChHHHH
Confidence            3679999999999999999999999999999999999999986  45543221            011123467888999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      .++++++.  ++++||||+.+|+++++.+
T Consensus       157 ~~~~~~~~~~~~~i~igD~~~Di~~a~~~  185 (226)
T PRK13222        157 LACEKLGLDPEEMLFVGDSRNDIQAARAA  185 (226)
T ss_pred             HHHHHcCCChhheEEECCCHHHHHHHHHC
Confidence            99999988  7899999999999998753

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.64  E-value=8.9e-15  Score=121.23  Aligned_cols=94  Identities=20%  Similarity=0.254  Sum_probs=74.4

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|++|++.|++++++|+.....++.+++.+|+...++|...+..            ......+++++.+.
T Consensus        85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~------------~~~~~~KP~p~~~~  152 (220)
T TIGR03351        85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCP------------SDVAAGRPAPDLIL  152 (220)
T ss_pred             CCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcC------------CcCCCCCCCHHHHH
Confidence            357999999999999999999999999999999999999998521233322110            01123467899999


Q ss_pred             HHHHHcCC---CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY---KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~---~~v~~vGDg~ND~~al~~  258 (259)
                      ...+++|+   ++++||||+.+|+.+++.
T Consensus       153 ~a~~~~~~~~~~~~~~igD~~~Di~aa~~  181 (220)
T TIGR03351       153 RAMELTGVQDVQSVAVAGDTPNDLEAGIN  181 (220)
T ss_pred             HHHHHcCCCChhHeEEeCCCHHHHHHHHH
Confidence            99999886   579999999999999875

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.64  E-value=1.7e-14  Score=122.09  Aligned_cols=171  Identities=16%  Similarity=0.263  Sum_probs=120.6

Q ss_pred             EEEEeCCCcccccc--------hHHHHHHHhc-Cchh----HHHHHHHHcC----CCCcHH-------HHHHHHHhhcCC
Q 025042           85 AVCFDVDSTVCVDE--------GIDELAEFCG-AGKA----VAEWTARAMG----GSVPFE-------EALAARLSLFKP  140 (259)
Q Consensus        85 ~vvFD~DGTLt~~~--------~~~~l~~~~~-~~~~----~~~~~~~~~~----~~~~~~-------~~~~~~~~~~~~  140 (259)
                      -|+-|+|-|||.-.        +.+-+.+... ..+.    ...+..+|..    ..++.+       +.+......+.+
T Consensus        24 qvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~~m~eWw~k~~~l~~~  103 (277)
T TIGR01544        24 QIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDPVLTVEEKYPYMVEWWTKSHGLLVQ  103 (277)
T ss_pred             EEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHhhccceecCCCCChHHhhhHHHHHHHHHHHHHhc
Confidence            58999999996521        2233333322 1121    2334444422    122222       333333344432


Q ss_pred             ---CHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC--CCcEeecceeecCCCceecc
Q 025042          141 ---SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP--PENIFANQLLFKSSGEFLGF  215 (259)
Q Consensus       141 ---~~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~--~~~~~~~~l~~~~~~~~~g~  215 (259)
                         +.+.+.+++......++||+.++++.|+++|++++|+|++....++.+++++|+.  ...+++|.+.++++|.++|+
T Consensus       104 ~~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~  183 (277)
T TIGR01544       104 QAFPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGF  183 (277)
T ss_pred             CCCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCC
Confidence               5677778887556789999999999999999999999999999999999999983  34789999999999999995


Q ss_pred             cCCCCCcCCCChHHHHH-HHHHHcC--C--CeEEEEecCcccHHhhh
Q 025042          216 DANEPTSRSGGKAAAVQ-QIRKAHA--Y--KVLAMIGDGATDLEVSI  257 (259)
Q Consensus       216 ~~~~~~~~~~~K~~~v~-~l~~~~g--~--~~v~~vGDg~ND~~al~  257 (259)
                      .  .+......|.+.+. ...+.++  .  ++|+++|||.||++|+.
T Consensus       184 ~--~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~  228 (277)
T TIGR01544       184 K--GPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMAD  228 (277)
T ss_pred             C--CCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence            3  44555577887666 4666655  2  78999999999999975

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.63  E-value=6.6e-15  Score=121.24  Aligned_cols=91  Identities=14%  Similarity=0.309  Sum_probs=75.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++++|++....++.+++++|+.  .+|...+.        +    +....++++++.+.+
T Consensus        84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~--~~f~~~~~--------~----~~~~~~Kp~p~~~~~  149 (213)
T TIGR01449        84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA--KYFSVLIG--------G----DSLAQRKPHPDPLLL  149 (213)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH--hhCcEEEe--------c----CCCCCCCCChHHHHH
Confidence            578999999999999999999999999999999999999996  45543211        0    111235778999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++++||||+.+|+++++.
T Consensus       150 ~~~~~~~~~~~~~~igDs~~d~~aa~~  176 (213)
T TIGR01449       150 AAERLGVAPQQMVYVGDSRVDIQAARA  176 (213)
T ss_pred             HHHHcCCChhHeEEeCCCHHHHHHHHH
Confidence            9999998  789999999999999875

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.63  E-value=1.1e-14  Score=128.66  Aligned_cols=166  Identities=16%  Similarity=0.156  Sum_probs=108.3

Q ss_pred             HHhc-cCcCEEEEeCCCcccccch-HH--HHH---HHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC--HHH---
Q 025042           77 LQLW-RTADAVCFDVDSTVCVDEG-ID--ELA---EFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS--LSQ---  144 (259)
Q Consensus        77 ~e~~-~~~k~vvFD~DGTLt~~~~-~~--~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---  144 (259)
                      .|+| ...++|+||+||||+++.. ..  .+.   +..+...........+..  .+..+.+..........  .+.   
T Consensus       124 ~~~~~~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G--~~~~~~l~~ll~~~~~~~~~e~l~~  201 (381)
T PLN02575        124 QERMGCGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEG--MKNEQAISEVLCWSRDPAELRRMAT  201 (381)
T ss_pred             HHhccCCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHhhccCCHHHHHHHHH
Confidence            3555 3679999999999998652 22  232   233332222222333322  33333333322211110  011   


Q ss_pred             -HHHHHHh---CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCC
Q 025042          145 -VQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEP  220 (259)
Q Consensus       145 -i~~~~~~---~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~  220 (259)
                       ..++...   ....++||+.++|+.|+++|++++|+|+..+..++.+++.+|+.  ++|...+..            +.
T Consensus       202 ~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~--~yFd~Iv~s------------dd  267 (381)
T PLN02575        202 RKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR--GFFSVIVAA------------ED  267 (381)
T ss_pred             HHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH--HHceEEEec------------Cc
Confidence             1122211   23568999999999999999999999999999999999999997  666553321            11


Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ...++++++.+....+++|+  ++|+||||+.+|+.+++.
T Consensus       268 v~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~  307 (381)
T PLN02575        268 VYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHD  307 (381)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH
Confidence            12357899999999999998  889999999999999875

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.63  E-value=1.2e-14  Score=116.98  Aligned_cols=157  Identities=20%  Similarity=0.274  Sum_probs=98.9

Q ss_pred             cCEEEEeCCCcccccchH-----HHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhc--CCCHHHH-------HHH
Q 025042           83 ADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KPSLSQV-------QDF  148 (259)
Q Consensus        83 ~k~vvFD~DGTLt~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i-------~~~  148 (259)
                      +++|+||+||||++....     ....+..+.... .... ....+ .+..+.+.......  ....+.+       .++
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFD-KQYN-TSLGG-LSREDILRAILKLRKPGLSLETIHQLAERKNEL   77 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCC-HHHH-HHcCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence            478999999999987632     222233332211 1111 12222 33333333333222  1111211       112


Q ss_pred             HH----hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCC
Q 025042          149 LE----KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRS  224 (259)
Q Consensus       149 ~~----~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~  224 (259)
                      ..    .....++||+.++|+.|+++|++++++|+.  ..++.+++.+|++  ++|...+..            +....+
T Consensus        78 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~--~~f~~v~~~------------~~~~~~  141 (185)
T TIGR02009        78 YRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT--DYFDAIVDA------------DEVKEG  141 (185)
T ss_pred             HHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH--HHCCEeeeh------------hhCCCC
Confidence            11    223679999999999999999999999987  6678889999986  445432211            011135


Q ss_pred             CChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          225 GGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       225 ~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++.++..++++|+  ++++||||+.+|+.+++.
T Consensus       142 kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~  177 (185)
T TIGR02009       142 KPHPETFLLAAELLGVSPNECVVFEDALAGVQAARA  177 (185)
T ss_pred             CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH
Confidence            6788889999999888  889999999999999875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.63  E-value=2.5e-15  Score=125.03  Aligned_cols=91  Identities=14%  Similarity=0.107  Sum_probs=75.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++++|++.+..++..++.+|+.  .+|...+..+        .    ...++++++.+..
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~--~~fd~iv~s~--------~----~~~~KP~p~~~~~  157 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD--AHLDLLLSTH--------T----FGYPKEDQRLWQA  157 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH--HHCCEEEEee--------e----CCCCCCCHHHHHH
Confidence            578999999999999999999999999999999999999986  5554332111        1    1235788999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|+  ++++||||+.+|+.+++.
T Consensus       158 ~~~~~~~~p~~~l~igDs~~di~aA~~  184 (224)
T PRK14988        158 VAEHTGLKAERTLFIDDSEPILDAAAQ  184 (224)
T ss_pred             HHHHcCCChHHEEEEcCCHHHHHHHHH
Confidence            9999998  789999999999998875

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.63  E-value=6e-15  Score=126.26  Aligned_cols=91  Identities=19%  Similarity=0.266  Sum_probs=74.2

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++++|+.....++.+++++++.  .+|.....        +    +.....+++++.++.
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~--~~f~~i~~--------~----d~~~~~Kp~p~~~~~  165 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG--RYFRWIIG--------G----DTLPQKKPDPAALLF  165 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH--hhCeEEEe--------c----CCCCCCCCCcHHHHH
Confidence            468999999999999999999999999999999999999986  54543211        0    111235778889999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++++||||+.||+.+++.
T Consensus       166 ~~~~~g~~~~~~l~IGD~~~Di~aA~~  192 (272)
T PRK13223        166 VMKMAGVPPSQSLFVGDSRSDVLAAKA  192 (272)
T ss_pred             HHHHhCCChhHEEEECCCHHHHHHHHH
Confidence            9999988  799999999999999874

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.62  E-value=2e-14  Score=117.20  Aligned_cols=92  Identities=14%  Similarity=0.132  Sum_probs=75.3

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|++|+++|++++++|++....++.+++.+|+.  ++|...+..+            ....++++++.++
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~--~~fd~i~~s~------------~~~~~KP~~~~~~  155 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD--DPFDAVLSAD------------AVRAYKPAPQVYQ  155 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh--hhhheeEehh------------hcCCCCCCHHHHH
Confidence            3578999999999999999999999999999999999999986  5554332111            1123577889999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..++++|+  +++++|||+.+|+.+++.
T Consensus       156 ~~~~~~~~~p~~~~~vgD~~~Di~~A~~  183 (198)
T TIGR01428       156 LALEALGVPPDEVLFVASNPWDLGGAKK  183 (198)
T ss_pred             HHHHHhCCChhhEEEEeCCHHHHHHHHH
Confidence            99999998  789999999999999875

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.62  E-value=7.8e-15  Score=125.29  Aligned_cols=92  Identities=11%  Similarity=0.124  Sum_probs=72.4

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++|+|+..+..++.+++.+++.  .++...+       +.+    +....++++++.+..
T Consensus       100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~--~~~~d~i-------~~~----~~~~~~KP~p~~~~~  166 (267)
T PRK13478        100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ--GYRPDHV-------VTT----DDVPAGRPYPWMALK  166 (267)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc--CCCceEE-------EcC----CcCCCCCCChHHHHH
Confidence            578999999999999999999999999999999999888764  3321111       111    111235778899999


Q ss_pred             HHHHcCC---CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY---KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~---~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|+   ++++||||+.+|+.+++.
T Consensus       167 a~~~l~~~~~~e~l~IGDs~~Di~aA~~  194 (267)
T PRK13478        167 NAIELGVYDVAACVKVDDTVPGIEEGLN  194 (267)
T ss_pred             HHHHcCCCCCcceEEEcCcHHHHHHHHH
Confidence            9999886   579999999999999875

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.62  E-value=7.3e-15  Score=120.50  Aligned_cols=92  Identities=20%  Similarity=0.291  Sum_probs=76.6

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|++|+++|++++++|+.....++..++.+|+.  .+|...+..            +....+++|+..++
T Consensus        73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~--~~f~~i~~~------------~~~~~~KP~~~~~~  138 (205)
T TIGR01454        73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL--PLFDHVIGS------------DEVPRPKPAPDIVR  138 (205)
T ss_pred             ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh--hheeeEEec------------CcCCCCCCChHHHH
Confidence            4678999999999999999999999999999999999999996  555543211            01123678999999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ++++++|+  ++++||||+.+|+.+++.
T Consensus       139 ~~~~~~~~~~~~~l~igD~~~Di~aA~~  166 (205)
T TIGR01454       139 EALRLLDVPPEDAVMVGDAVTDLASARA  166 (205)
T ss_pred             HHHHHcCCChhheEEEcCCHHHHHHHHH
Confidence            99999987  789999999999999875

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.61  E-value=1e-14  Score=124.70  Aligned_cols=89  Identities=21%  Similarity=0.369  Sum_probs=72.8

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ..+++||+.++|++|+++|+++.|+|+..+..++.+++++|+.  ++|....        .+    +.   ..+|...+.
T Consensus       140 ~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~--~~F~~vi--------~~----~~---~~~k~~~~~  202 (273)
T PRK13225        140 ALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR--SLFSVVQ--------AG----TP---ILSKRRALS  202 (273)
T ss_pred             cCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh--hheEEEE--------ec----CC---CCCCHHHHH
Confidence            3578999999999999999999999999999999999999997  6665322        11    00   124668888


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+++++++  ++++||||+.+|+.+++.
T Consensus       203 ~~l~~~~~~p~~~l~IGDs~~Di~aA~~  230 (273)
T PRK13225        203 QLVAREGWQPAAVMYVGDETRDVEAARQ  230 (273)
T ss_pred             HHHHHhCcChhHEEEECCCHHHHHHHHH
Confidence            88888887  789999999999999875

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.59  E-value=5.3e-14  Score=116.57  Aligned_cols=91  Identities=15%  Similarity=0.204  Sum_probs=75.2

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|++|+++|++++++|++....+...++.+|+.  .+|...+..+            ....++++++.++.
T Consensus        93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~--~~f~~i~~~~------------~~~~~KP~~~~~~~  158 (221)
T TIGR02253        93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR--DFFDAVITSE------------EEGVEKPHPKIFYA  158 (221)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH--HhccEEEEec------------cCCCCCCCHHHHHH
Confidence            578999999999999999999999999988889999999996  5564432111            11235778899999


Q ss_pred             HHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      .++++|+  ++++||||+. +|+.+++.
T Consensus       159 ~~~~~~~~~~~~~~igDs~~~di~~A~~  186 (221)
T TIGR02253       159 ALKRLGVKPEEAVMVGDRLDKDIKGAKN  186 (221)
T ss_pred             HHHHcCCChhhEEEECCChHHHHHHHHH
Confidence            9999998  7899999998 99999875

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=99.59  E-value=1.6e-14  Score=134.61  Aligned_cols=104  Identities=22%  Similarity=0.233  Sum_probs=77.1

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc-Eee--cceeec--CC---CceecccCCCCCcCC
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN-IFA--NQLLFK--SS---GEFLGFDANEPTSRS  224 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~-~~~--~~l~~~--~~---~~~~g~~~~~~~~~~  224 (259)
                      .++.|||+++.++.+++.|+++-|+|||+-.++++++.+.||-.+. -|.  +--+|.  .+   ..+..+........|
T Consensus       645 kDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP  724 (1034)
T KOG0204|consen  645 KDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP  724 (1034)
T ss_pred             cCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCC
Confidence            4589999999999999999999999999999999999999984211 000  000000  00   012223333455679


Q ss_pred             CChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          225 GGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       225 ~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      .+|-..++.|+++ | +.|+.-|||.||+|||+.
T Consensus       725 ~DK~lLVk~L~~~-g-~VVAVTGDGTNDaPALke  756 (1034)
T KOG0204|consen  725 NDKHLLVKGLIKQ-G-EVVAVTGDGTNDAPALKE  756 (1034)
T ss_pred             chHHHHHHHHHhc-C-cEEEEecCCCCCchhhhh
Confidence            9999999999966 5 788888999999999985

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.59  E-value=1.8e-14  Score=122.05  Aligned_cols=93  Identities=14%  Similarity=0.120  Sum_probs=73.6

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|+.|+++|++++|+|+.....++.+++++|+.  .+|...+       +.    .+.....+|+++.+.
T Consensus        97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~--~~f~d~i-------i~----~~~~~~~KP~p~~~~  163 (253)
T TIGR01422        97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ--GYRPDYN-------VT----TDDVPAGRPAPWMAL  163 (253)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc--CCCCceE-------Ec----cccCCCCCCCHHHHH
Confidence            3578999999999999999999999999999999999999986  4432111       11    111123567888999


Q ss_pred             HHHHHcCC---CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY---KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~---~~v~~vGDg~ND~~al~~  258 (259)
                      ..++++|+   ++++||||+.+|+.+++.
T Consensus       164 ~a~~~l~~~~~~~~l~IGDs~~Di~aA~~  192 (253)
T TIGR01422       164 KNAIELGVYDVAACVKVGDTVPDIEEGRN  192 (253)
T ss_pred             HHHHHcCCCCchheEEECCcHHHHHHHHH
Confidence            99998885   579999999999999875

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK11587 putative phosphatase; Provisional

Probab=99.58  E-value=8.8e-14  Score=115.26  Aligned_cols=91  Identities=11%  Similarity=0.061  Sum_probs=71.4

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|+.|+++|++++++|++.....+...+..++.   .+...+        .+.    ....++++++.+.
T Consensus        81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~---~~~~i~--------~~~----~~~~~KP~p~~~~  145 (218)
T PRK11587         81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP---APEVFV--------TAE----RVKRGKPEPDAYL  145 (218)
T ss_pred             CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC---CccEEE--------EHH----HhcCCCCCcHHHH
Confidence            3578999999999999999999999999888777778888874   121111        110    1123577889999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..++++|+  ++++||||+.+|+.+++.
T Consensus       146 ~~~~~~g~~p~~~l~igDs~~di~aA~~  173 (218)
T PRK11587        146 LGAQLLGLAPQECVVVEDAPAGVLSGLA  173 (218)
T ss_pred             HHHHHcCCCcccEEEEecchhhhHHHHH
Confidence            99999998  899999999999999875

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.58  E-value=6.9e-14  Score=112.57  Aligned_cols=89  Identities=18%  Similarity=0.180  Sum_probs=70.6

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|++|+++|++++++|++.  ....+++.+|+.  .+|...+..            +....++++++.++.
T Consensus        86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~--~~f~~~~~~------------~~~~~~kp~p~~~~~  149 (185)
T TIGR01990        86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLI--DYFDAIVDP------------AEIKKGKPDPEIFLA  149 (185)
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcH--hhCcEEEeh------------hhcCCCCCChHHHHH
Confidence            4689999999999999999999999764  356788999986  555433211            111235789999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++++++  ++++||||+.+|+.+++.
T Consensus       150 ~~~~~~~~~~~~v~vgD~~~di~aA~~  176 (185)
T TIGR01990       150 AAEGLGVSPSECIGIEDAQAGIEAIKA  176 (185)
T ss_pred             HHHHcCCCHHHeEEEecCHHHHHHHHH
Confidence            9999988  789999999999999875

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.57  E-value=7.3e-14  Score=115.84  Aligned_cols=160  Identities=18%  Similarity=0.226  Sum_probs=101.5

Q ss_pred             cCcCEEEEeCCCcccccchH--HHHH---HHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC--CCHHHHHHH----H
Q 025042           81 RTADAVCFDVDSTVCVDEGI--DELA---EFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQDF----L  149 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~--~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~----~  149 (259)
                      .++++++||+||||++....  ..+.   ...+...........+..  .+..+.+........  ...+.+...    +
T Consensus         2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (221)
T PRK10563          2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKG--VKLYEIIDIISKEHGVTLAKAELEPVYRAEV   79 (221)
T ss_pred             CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            35899999999999986532  2332   223322122223333221  233333333222221  122332211    1


Q ss_pred             H---hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCC
Q 025042          150 E---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGG  226 (259)
Q Consensus       150 ~---~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~  226 (259)
                      .   .....++||+.++|+.|   +++++++|++.+..++..++.+|+.  .+|...+       +++..    ...+++
T Consensus        80 ~~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~--~~F~~~v-------~~~~~----~~~~KP  143 (221)
T PRK10563         80 ARLFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML--HYFPDKL-------FSGYD----IQRWKP  143 (221)
T ss_pred             HHHHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH--HhCcceE-------eeHHh----cCCCCC
Confidence            1   12467899999999998   3899999999989999999999996  5554322       11111    123578


Q ss_pred             hHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          227 KAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       227 K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++.+...++++|+  ++|+||||+.+|+.+++.
T Consensus       144 ~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~  177 (221)
T PRK10563        144 DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIA  177 (221)
T ss_pred             ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH
Confidence            99999999999998  789999999999999875

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.56  E-value=3.4e-14  Score=130.31  Aligned_cols=91  Identities=22%  Similarity=0.331  Sum_probs=74.1

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|++|+++|+++.|+|++.+..++.+++.+|+.  ++|...+..+        .     ..+++|++.+.
T Consensus       328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~--~~f~~i~~~d--------~-----v~~~~kP~~~~  392 (459)
T PRK06698        328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD--QWVTETFSIE--------Q-----INSLNKSDLVK  392 (459)
T ss_pred             CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH--hhcceeEecC--------C-----CCCCCCcHHHH
Confidence            3578999999999999999999999999999999999999997  6665533211        0     11245667888


Q ss_pred             HHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      ..+++++.++++||||+.+|+.+++.
T Consensus       393 ~al~~l~~~~~v~VGDs~~Di~aAk~  418 (459)
T PRK06698        393 SILNKYDIKEAAVVGDRLSDINAAKD  418 (459)
T ss_pred             HHHHhcCcceEEEEeCCHHHHHHHHH
Confidence            88887777899999999999999875

>PRK09449 dUMP phosphatase; Provisional

Probab=99.55  E-value=3.1e-13  Score=112.25  Aligned_cols=90  Identities=18%  Similarity=0.234  Sum_probs=72.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+ .|++++++|++....++..++++|+.  .+|...+..+            ....++|+++.+..
T Consensus        94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~--~~fd~v~~~~------------~~~~~KP~p~~~~~  158 (224)
T PRK09449         94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR--DYFDLLVISE------------QVGVAKPDVAIFDY  158 (224)
T ss_pred             CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH--HHcCEEEEEC------------ccCCCCCCHHHHHH
Confidence            568999999999999 57999999999999999999999986  5554332111            11235788999999


Q ss_pred             HHHHcCC---CeEEEEecCc-ccHHhhhc
Q 025042          234 IRKAHAY---KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~---~~v~~vGDg~-ND~~al~~  258 (259)
                      +++++|.   ++++||||+. +|+.+++.
T Consensus       159 ~~~~~~~~~~~~~~~vgD~~~~Di~~A~~  187 (224)
T PRK09449        159 ALEQMGNPDRSRVLMVGDNLHSDILGGIN  187 (224)
T ss_pred             HHHHcCCCCcccEEEEcCCcHHHHHHHHH
Confidence            9999986   5799999998 69998875

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.54  E-value=2.2e-13  Score=111.06  Aligned_cols=88  Identities=17%  Similarity=0.177  Sum_probs=71.3

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR  235 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~  235 (259)
                      +.++..++|+.|++.|++++|+||..+..++.+++.+|+.  .+|...+..+            .... +++++.+....
T Consensus       107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~f~~~~~~~------------~~~~-KP~p~~~~~~~  171 (197)
T TIGR01548       107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE--ILFPVQIWME------------DCPP-KPNPEPLILAA  171 (197)
T ss_pred             cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch--hhCCEEEeec------------CCCC-CcCHHHHHHHH
Confidence            4455699999999999999999999999999999999997  6664432211            1112 67888888888


Q ss_pred             HHcCC--CeEEEEecCcccHHhhhc
Q 025042          236 KAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       236 ~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++|+  ++|+||||+.+|+.+++.
T Consensus       172 ~~~~~~~~~~i~vGD~~~Di~aA~~  196 (197)
T TIGR01548       172 KALGVEACHAAMVGDTVDDIITGRK  196 (197)
T ss_pred             HHhCcCcccEEEEeCCHHHHHHHHh
Confidence            98887  789999999999999875

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PLN02940 riboflavin kinase

Probab=99.52  E-value=1.4e-13  Score=123.03  Aligned_cols=92  Identities=17%  Similarity=0.126  Sum_probs=74.1

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHH-HcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIAS-VLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~-~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ...++||+.++|+.|+++|++++|+|+..+..++..++ .+|+.  ++|...+..            +....++++++.+
T Consensus        91 ~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~--~~Fd~ii~~------------d~v~~~KP~p~~~  156 (382)
T PLN02940         91 NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK--ESFSVIVGG------------DEVEKGKPSPDIF  156 (382)
T ss_pred             cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH--hhCCEEEeh------------hhcCCCCCCHHHH
Confidence            35689999999999999999999999999888888776 68885  445432211            1112357889999


Q ss_pred             HHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ...++++|+  ++|+||||+.+|+.+++.
T Consensus       157 ~~a~~~lgv~p~~~l~VGDs~~Di~aA~~  185 (382)
T PLN02940        157 LEAAKRLNVEPSNCLVIEDSLPGVMAGKA  185 (382)
T ss_pred             HHHHHHcCCChhHEEEEeCCHHHHHHHHH
Confidence            999999988  889999999999999875

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.52  E-value=1.1e-14  Score=115.48  Aligned_cols=113  Identities=17%  Similarity=0.132  Sum_probs=87.7

Q ss_pred             HhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCC
Q 025042           78 QLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLS  157 (259)
Q Consensus        78 e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  157 (259)
                      |.++.+|+++||+|||||++..+.     -..+.+..                                      ....+
T Consensus         2 ~~~~~i~~~v~d~dGv~tdg~~~~-----~~~g~~~~--------------------------------------~~~~~   38 (169)
T TIGR02726         2 EQAKNIKLVILDVDGVMTDGRIVI-----NDEGIESR--------------------------------------NFDIK   38 (169)
T ss_pred             CccccCeEEEEeCceeeECCeEEE-----cCCCcEEE--------------------------------------EEecc
Confidence            567889999999999999986310     00111000                                      01233


Q ss_pred             ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHH
Q 025042          158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKA  237 (259)
Q Consensus       158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~  237 (259)
                      ++.  .++.|++.|+++.|+|+.....++.+++++|+.  ++|..                     .++|++.++.++++
T Consensus        39 D~~--~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~--~~f~~---------------------~kpkp~~~~~~~~~   93 (169)
T TIGR02726        39 DGM--GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK--RFHEG---------------------IKKKTEPYAQMLEE   93 (169)
T ss_pred             hHH--HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc--EEEec---------------------CCCCHHHHHHHHHH
Confidence            444  678889999999999999999999999999996  56643                     25788999999999


Q ss_pred             cCC--CeEEEEecCcccHHhhhc
Q 025042          238 HAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       238 ~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +|+  ++++||||+.||++|++.
T Consensus        94 l~~~~~ev~~iGD~~nDi~~~~~  116 (169)
T TIGR02726        94 MNISDAEVCYVGDDLVDLSMMKR  116 (169)
T ss_pred             cCcCHHHEEEECCCHHHHHHHHH
Confidence            988  799999999999999975

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.52  E-value=3.8e-13  Score=110.07  Aligned_cols=90  Identities=16%  Similarity=0.124  Sum_probs=70.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++|+|+.... .+..++.+|+.  .+|...+..+        .    ...++++++.+..
T Consensus       104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~--~~fd~i~~s~--------~----~~~~KP~~~~~~~  168 (203)
T TIGR02252       104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL--EYFDFVVTSY--------E----VGAEKPDPKIFQE  168 (203)
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH--HhcceEEeec--------c----cCCCCCCHHHHHH
Confidence            368999999999999999999999987664 57788889985  4554332111        0    1124678889999


Q ss_pred             HHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      .++++|+  ++++||||+. +|+.+++.
T Consensus       169 ~~~~~~~~~~~~~~IgD~~~~Di~~A~~  196 (203)
T TIGR02252       169 ALERAGISPEEALHIGDSLRNDYQGARA  196 (203)
T ss_pred             HHHHcCCChhHEEEECCCchHHHHHHHH
Confidence            9999998  7999999997 89998875

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.51  E-value=4.2e-13  Score=111.19  Aligned_cols=90  Identities=18%  Similarity=0.270  Sum_probs=73.7

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|++|+++ ++++++|++....++.+++++|+.  .+|...+..+            ....++++++.++.
T Consensus        96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~--~~fd~i~~~~------------~~~~~KP~~~~~~~  160 (224)
T TIGR02254        96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF--PFFDDIFVSE------------DAGIQKPDKEIFNY  160 (224)
T ss_pred             CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH--hhcCEEEEcC------------ccCCCCCCHHHHHH
Confidence            57899999999999999 999999999999999999999996  5554332111            11235778899999


Q ss_pred             HHHHc-CC--CeEEEEecCc-ccHHhhhc
Q 025042          234 IRKAH-AY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       234 l~~~~-g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      ..+++ |+  ++++||||+. +|+.+++.
T Consensus       161 ~~~~~~~~~~~~~v~igD~~~~di~~A~~  189 (224)
T TIGR02254       161 ALERMPKFSKEEVLMIGDSLTADIKGGQN  189 (224)
T ss_pred             HHHHhcCCCchheEEECCCcHHHHHHHHH
Confidence            99998 87  7899999998 89999875

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.51  E-value=3.3e-13  Score=116.34  Aligned_cols=93  Identities=15%  Similarity=0.145  Sum_probs=71.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++++|+.....+..+++.++..  .++.. +.+     +.    .+....++++++.+..
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~--~~~~~-~~~-----v~----~~~~~~~KP~p~~~~~  210 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGP--ERAQG-LDV-----FA----GDDVPKKKPDPDIYNL  210 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccc--cccCc-eEE-----Ee----ccccCCCCCCHHHHHH
Confidence            478999999999999999999999999998888888776432  22211 000     10    1111235788999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++++||||+.+|+.+++.
T Consensus       211 a~~~~~~~p~~~l~IGDs~~Di~aA~~  237 (286)
T PLN02779        211 AAETLGVDPSRCVVVEDSVIGLQAAKA  237 (286)
T ss_pred             HHHHhCcChHHEEEEeCCHHhHHHHHH
Confidence            9999998  789999999999999875

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.51  E-value=3.6e-13  Score=111.81  Aligned_cols=163  Identities=18%  Similarity=0.181  Sum_probs=103.7

Q ss_pred             CcCEEEEeCCCcccccchHH-----HHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCC-CHHHHHH-----HHH
Q 025042           82 TADAVCFDVDSTVCVDEGID-----ELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQD-----FLE  150 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~-----~~~  150 (259)
                      ++++++||+||||+|++..+     .+.+.++......................+........+ .......     ...
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEAL   80 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence            47899999999999987433     333334433222222222111111111222111111110 1111111     111


Q ss_pred             -hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042          151 -KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA  229 (259)
Q Consensus       151 -~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~  229 (259)
                       .....+.||+.++++.|+++|+.+.+.|++.+..++..++.+|+.  ++|...+.-            +....++|.++
T Consensus        81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~--~~f~~~v~~------------~dv~~~KP~Pd  146 (221)
T COG0637          81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLL--DYFDVIVTA------------DDVARGKPAPD  146 (221)
T ss_pred             hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccCh--hhcchhccH------------HHHhcCCCCCH
Confidence             124579999999999999999999999999999999999999987  666553311            11234577888


Q ss_pred             HHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          230 AVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       230 ~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ....-.+++|+  .+|+.|.|+.+++.+++.
T Consensus       147 ~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~a  177 (221)
T COG0637         147 IYLLAAERLGVDPEECVVVEDSPAGIQAAKA  177 (221)
T ss_pred             HHHHHHHHcCCChHHeEEEecchhHHHHHHH
Confidence            88888888888  899999999999999875

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.50  E-value=4.9e-13  Score=108.01  Aligned_cols=89  Identities=10%  Similarity=0.101  Sum_probs=71.0

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..+.|+ .++|+.|++. ++++++|++.+..++.+++++|+.  .+|...+..            +....++++++.+..
T Consensus        87 ~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~--~~fd~i~~~------------~~~~~~KP~p~~~~~  150 (188)
T PRK10725         87 VEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR--RYFDAVVAA------------DDVQHHKPAPDTFLR  150 (188)
T ss_pred             CCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH--hHceEEEeh------------hhccCCCCChHHHHH
Confidence            456775 6899999875 789999999999999999999996  555543211            111235789999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..+++|+  ++++||||+.+|+.+++.
T Consensus       151 ~~~~~~~~~~~~l~igDs~~di~aA~~  177 (188)
T PRK10725        151 CAQLMGVQPTQCVVFEDADFGIQAARA  177 (188)
T ss_pred             HHHHcCCCHHHeEEEeccHhhHHHHHH
Confidence            9999997  789999999999999875

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.50  E-value=2.8e-14  Score=111.93  Aligned_cols=73  Identities=22%  Similarity=0.276  Sum_probs=65.4

Q ss_pred             HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC--
Q 025042          163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY--  240 (259)
Q Consensus       163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~--  240 (259)
                      ++++|+++|++++|+|++....++.+++++|++  .+|..                     .++|++.++++++++|+  
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~---------------------~~~k~~~~~~~~~~~~~~~   92 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQG---------------------QSNKLIAFSDILEKLALAP   92 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEec---------------------ccchHHHHHHHHHHcCCCH
Confidence            899999999999999999999999999999996  55542                     25799999999999887  


Q ss_pred             CeEEEEecCcccHHhhhc
Q 025042          241 KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~  258 (259)
                      ++++||||+.||++|++.
T Consensus        93 ~~~~~vGDs~~D~~~~~~  110 (154)
T TIGR01670        93 ENVAYIGDDLIDWPVMEK  110 (154)
T ss_pred             HHEEEECCCHHHHHHHHH
Confidence            799999999999999875

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.49  E-value=1.6e-13  Score=108.61  Aligned_cols=93  Identities=22%  Similarity=0.353  Sum_probs=76.2

Q ss_pred             CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       152 ~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ....++|++.++|+.|+++|++++++|+.....++..++++|+.  ..|...+..+        .    ...++++...+
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~--~~f~~i~~~~--------~----~~~~Kp~~~~~  139 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD--DYFDEIISSD--------D----VGSRKPDPDAY  139 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG--GGCSEEEEGG--------G----SSSSTTSHHHH
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc--cccccccccc--------h----hhhhhhHHHHH
Confidence            34689999999999999999999999999999999999999986  4444322111        1    12357888999


Q ss_pred             HHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++++|+  ++++||||+.+|+.+++.
T Consensus       140 ~~~~~~~~~~p~~~~~vgD~~~d~~~A~~  168 (176)
T PF13419_consen  140 RRALEKLGIPPEEILFVGDSPSDVEAAKE  168 (176)
T ss_dssp             HHHHHHHTSSGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHHHcCCCcceEEEEeCCHHHHHHHHH
Confidence            999999988  899999999999999874

...

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.49  E-value=6.7e-14  Score=112.90  Aligned_cols=75  Identities=21%  Similarity=0.295  Sum_probs=65.3

Q ss_pred             HHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC-
Q 025042          162 ELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY-  240 (259)
Q Consensus       162 e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~-  240 (259)
                      ..++.|+++|+++.++||.....+..+++++|++  .+|..                     .++|...++++++++|+ 
T Consensus        55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~g---------------------~~~k~~~l~~~~~~~gl~  111 (183)
T PRK09484         55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQG---------------------QSNKLIAFSDLLEKLAIA  111 (183)
T ss_pred             HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeecC---------------------CCcHHHHHHHHHHHhCCC
Confidence            3778888899999999999999999999999996  55532                     25799999999999998 


Q ss_pred             -CeEEEEecCcccHHhhhcC
Q 025042          241 -KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 -~~v~~vGDg~ND~~al~~v  259 (259)
                       ++++||||+.||++|++.+
T Consensus       112 ~~ev~~VGDs~~D~~~a~~a  131 (183)
T PRK09484        112 PEQVAYIGDDLIDWPVMEKV  131 (183)
T ss_pred             HHHEEEECCCHHHHHHHHHC
Confidence             7999999999999999753

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.48  E-value=8e-13  Score=107.99  Aligned_cols=161  Identities=14%  Similarity=0.074  Sum_probs=99.0

Q ss_pred             CEEEEeCCCcccccchHHHHHHHhc-CchhHHH---------HHHHHcCCCCcHHHHHHHHHhhcCC--CHHHHHHHHHh
Q 025042           84 DAVCFDVDSTVCVDEGIDELAEFCG-AGKAVAE---------WTARAMGGSVPFEEALAARLSLFKP--SLSQVQDFLEK  151 (259)
Q Consensus        84 k~vvFD~DGTLt~~~~~~~l~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~  151 (259)
                      .+|+||+||||++.+....+..... .+.....         .......|.++..+...........  ..+.+...+..
T Consensus         1 ~~viFDldgvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (199)
T PRK09456          1 MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMALSLSYEQFAHGWQA   80 (199)
T ss_pred             CEEEEeCCCccccCcHHHHHHHHHHhcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            3799999999998654332222211 1111111         1223334555555544433333321  22333332322


Q ss_pred             CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH-cCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042          152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV-LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA  230 (259)
Q Consensus       152 ~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~-lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~  230 (259)
                      ....++||+.++|+.|+++|++++++|+......+.+... .++.  .+|...+..            .....++|+++.
T Consensus        81 ~~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~--~~fd~v~~s------------~~~~~~KP~p~~  146 (199)
T PRK09456         81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVR--AAADHIYLS------------QDLGMRKPEARI  146 (199)
T ss_pred             HHhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHH--HhcCEEEEe------------cccCCCCCCHHH
Confidence            2245899999999999999999999999987776655443 3443  333222111            011235789999


Q ss_pred             HHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          231 VQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       231 v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ++..++++|+  ++++||||+..|+.+++.
T Consensus       147 ~~~~~~~~~~~p~~~l~vgD~~~di~aA~~  176 (199)
T PRK09456        147 YQHVLQAEGFSAADAVFFDDNADNIEAANA  176 (199)
T ss_pred             HHHHHHHcCCChhHeEEeCCCHHHHHHHHH
Confidence            9999999998  899999999999998864

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.47  E-value=2.6e-13  Score=102.75  Aligned_cols=105  Identities=18%  Similarity=0.181  Sum_probs=74.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC--CCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP--PENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~--~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ..++|++.++++.|+++|++++++|++.+..++.+++.+|+.  .+.++...........-.+..........++|...+
T Consensus        23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (139)
T cd01427          23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL  102 (139)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence            578999999999999999999999999999999999999873  112332211000000000001111222236788999


Q ss_pred             HHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +.+.+.++.  ++++++||+.+|++|++.
T Consensus       103 ~~~~~~~~~~~~~~~~igD~~~d~~~~~~  131 (139)
T cd01427         103 LAALKLLGVDPEEVLMVGDSLNDIEMAKA  131 (139)
T ss_pred             HHHHHHcCCChhhEEEeCCCHHHHHHHHH
Confidence            999998876  789999999999999875

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=99.47  E-value=7.1e-14  Score=106.27  Aligned_cols=114  Identities=21%  Similarity=0.287  Sum_probs=92.0

Q ss_pred             HHhccCcCEEEEeCCCcccccchHHHHHHHhc-CchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCC
Q 025042           77 LQLWRTADAVCFDVDSTVCVDEGIDELAEFCG-AGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPR  155 (259)
Q Consensus        77 ~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  155 (259)
                      .+++++++.++||.||||||+..      ++. .+++++.                                      ..
T Consensus         2 ~~ra~~IkLli~DVDGvLTDG~l------y~~~~Gee~Ka--------------------------------------Fn   37 (170)
T COG1778           2 IARAKNIKLLILDVDGVLTDGKL------YYDENGEEIKA--------------------------------------FN   37 (170)
T ss_pred             hhhhhhceEEEEeccceeecCeE------EEcCCCceeee--------------------------------------ee
Confidence            46788999999999999999873      111 1111111                                      13


Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR  235 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~  235 (259)
                      .++|.  -|+.|.+.|+++.|+||.....++.-++.||++  ++|..                     -++|..+++.|+
T Consensus        38 v~DG~--Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG---------------------~~dK~~a~~~L~   92 (170)
T COG1778          38 VRDGH--GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQG---------------------ISDKLAAFEELL   92 (170)
T ss_pred             ccCcH--HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeec---------------------hHhHHHHHHHHH
Confidence            45565  678888999999999999999999999999997  66654                     368999999999


Q ss_pred             HHcCC--CeEEEEecCcccHHhhhcC
Q 025042          236 KAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       236 ~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +++++  ++|.|+||..||+|+++.|
T Consensus        93 ~~~~l~~e~~ayiGDD~~Dlpvm~~v  118 (170)
T COG1778          93 KKLNLDPEEVAYVGDDLVDLPVMEKV  118 (170)
T ss_pred             HHhCCCHHHhhhhcCccccHHHHHHc
Confidence            99998  8999999999999999864

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.47  E-value=1.1e-12  Score=108.02  Aligned_cols=92  Identities=13%  Similarity=0.083  Sum_probs=65.7

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCcccc--HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHM--INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA  230 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~--~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~  230 (259)
                      ...++||+.++|+.|+++|++++++|++....  .......+++.  .+|...+..+            .....++.+..
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~--~~fd~v~~s~------------~~~~~KP~p~~  157 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM--ALFDAVVESC------------LEGLRKPDPRI  157 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH--hhCCEEEEee------------ecCCCCCCHHH
Confidence            45789999999999999999999999986544  22223334543  3333221100            01124678889


Q ss_pred             HHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          231 VQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       231 v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ++..++++|+  ++++||||+..|+.+++.
T Consensus       158 ~~~~~~~~g~~~~~~l~i~D~~~di~aA~~  187 (211)
T TIGR02247       158 YQLMLERLGVAPEECVFLDDLGSNLKPAAA  187 (211)
T ss_pred             HHHHHHHcCCCHHHeEEEcCCHHHHHHHHH
Confidence            9999999998  789999999999999875

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.46  E-value=9.3e-13  Score=102.97  Aligned_cols=89  Identities=16%  Similarity=0.153  Sum_probs=70.6

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ....||+.++++.|+++|++++++|+..+..+..+.+.+ +.  ..|.....            .+... ++++++.+..
T Consensus        63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~--~~f~~i~~------------~~~~~-~Kp~~~~~~~  126 (154)
T TIGR01549        63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LG--DYFDLILG------------SDEFG-AKPEPEIFLA  126 (154)
T ss_pred             heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HH--hcCcEEEe------------cCCCC-CCcCHHHHHH
Confidence            456799999999999999999999999999999888876 53  33332211            01112 5778999999


Q ss_pred             HHHHcCC-CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY-KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~-~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+ .+++||||+.+|+.+++.
T Consensus       127 ~~~~~~~~~~~l~iGDs~~Di~aa~~  152 (154)
T TIGR01549       127 ALESLGLPPEVLHVGDNLNDIEGARN  152 (154)
T ss_pred             HHHHcCCCCCEEEEeCCHHHHHHHHH
Confidence            9999987 589999999999999875

HAD subfamilies caused by an overly broad single model.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.44  E-value=1.2e-12  Score=104.85  Aligned_cols=90  Identities=17%  Similarity=0.268  Sum_probs=71.2

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++++|+..... ..+..++|+.  ..|...+..            +....+++++..++.
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~--~~f~~i~~~------------~~~~~~KP~~~~~~~  148 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR--DLFDVVIFS------------GDVGRGKPDPDIYLL  148 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH--HHCCEEEEc------------CCCCCCCCCHHHHHH
Confidence            4789999999999999999999999998887 6666668885  444332211            011235778899999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++++||||+..|+.+++.
T Consensus       149 ~~~~~~~~~~~~~~vgD~~~di~aA~~  175 (183)
T TIGR01509       149 ALKKLGLKPEECLFVDDSPAGIEAAKA  175 (183)
T ss_pred             HHHHcCCCcceEEEEcCCHHHHHHHHH
Confidence            9999887  899999999999999875

HAD subfamilies caused by an overly broad single model.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.42  E-value=1.9e-12  Score=104.42  Aligned_cols=92  Identities=16%  Similarity=0.218  Sum_probs=70.4

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..+.||+.++|+.|+   .+++++|+.....+..+++.+|+.  .+|...+..++        .......++|+++.++.
T Consensus        83 ~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~--~~fd~i~~~~~--------~~~~~~~~KP~p~~~~~  149 (184)
T TIGR01993        83 LKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE--DCFDGIFCFDT--------ANPDYLLPKPSPQAYEK  149 (184)
T ss_pred             CCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH--hhhCeEEEeec--------ccCccCCCCCCHHHHHH
Confidence            458899999999997   478999999999999999999996  55544322111        11000014778899999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|+  ++++||||+..|+.+++.
T Consensus       150 ~~~~~~~~~~~~l~vgD~~~di~aA~~  176 (184)
T TIGR01993       150 ALREAGVDPERAIFFDDSARNIAAAKA  176 (184)
T ss_pred             HHHHhCCCccceEEEeCCHHHHHHHHH
Confidence            9999988  789999999999999875

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.41  E-value=8.9e-13  Score=102.57  Aligned_cols=93  Identities=16%  Similarity=0.191  Sum_probs=68.8

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCcc---------------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANE  219 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---------------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~  219 (259)
                      .++||+.++|+.|+++|++++++|+..+               ..+..+++++|+.....|....           ...+
T Consensus        27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----------~~~~   95 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPH-----------HPAD   95 (147)
T ss_pred             EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCC-----------CCCC
Confidence            4789999999999999999999999764               3455677888885211222110           0001


Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .....+++++.++.+++++|+  ++++||||+..|+.+++.
T Consensus        96 ~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~  136 (147)
T TIGR01656        96 NCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARN  136 (147)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHH
Confidence            111247899999999999998  789999999999999875

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.40  E-value=3.5e-12  Score=97.25  Aligned_cols=86  Identities=17%  Similarity=0.167  Sum_probs=69.5

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCc--------cccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGF--------RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGG  226 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~--------~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~  226 (259)
                      .++|++.++|++|++.|++++++|+..        ...++.+++.+++.  ..+.. .        .+       ..+++
T Consensus        25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~-~--------~~-------~~~KP   86 (132)
T TIGR01662        25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLY-A--------CP-------HCRKP   86 (132)
T ss_pred             eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEE-E--------CC-------CCCCC
Confidence            578999999999999999999999988        67788889999985  21111 0        01       12467


Q ss_pred             hHHHHHHHHHHc-CC--CeEEEEec-CcccHHhhhc
Q 025042          227 KAAAVQQIRKAH-AY--KVLAMIGD-GATDLEVSIF  258 (259)
Q Consensus       227 K~~~v~~l~~~~-g~--~~v~~vGD-g~ND~~al~~  258 (259)
                      |++.++.+++++ ++  ++++|||| ..+|+.+++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~  122 (132)
T TIGR01662        87 KPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKR  122 (132)
T ss_pred             ChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHH
Confidence            899999999999 47  89999999 7999999875

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.39  E-value=4.3e-12  Score=126.22  Aligned_cols=165  Identities=19%  Similarity=0.230  Sum_probs=103.1

Q ss_pred             HhccCcCEEEEeCCCcccccchHH-----HHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhc--CC-CHH----HH
Q 025042           78 QLWRTADAVCFDVDSTVCVDEGID-----ELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KP-SLS----QV  145 (259)
Q Consensus        78 e~~~~~k~vvFD~DGTLt~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~----~i  145 (259)
                      +.++++++|+||+||||++.+...     .+.+..+.......+. ....  ....+.+.......  .+ ..+    .+
T Consensus        70 ~~~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~-~~~G--~~~~~~~~~~~~~~~l~~~~~~~~~~~~  146 (1057)
T PLN02919         70 EEWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFV-PFMG--TGEANFLGGVASVKGVKGFDPDAAKKRF  146 (1057)
T ss_pred             CcCCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHH-HHhC--CCHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence            346789999999999999976322     2223333222112221 2211  12222222211111  11 111    11


Q ss_pred             -HHHHHh----CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCC
Q 025042          146 -QDFLEK----RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEP  220 (259)
Q Consensus       146 -~~~~~~----~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~  220 (259)
                       +.+...    ....++||+.++|++|+++|++++|+|+.....++..++++|++. .+|...+..            +.
T Consensus       147 ~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~-~~Fd~iv~~------------~~  213 (1057)
T PLN02919        147 FEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPL-SMFDAIVSA------------DA  213 (1057)
T ss_pred             HHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCCh-hHCCEEEEC------------cc
Confidence             112111    123479999999999999999999999999999999999999851 223322111            11


Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ...++++++.+...++++|+  ++++||||+.+|+.+++.
T Consensus       214 ~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~  253 (1057)
T PLN02919        214 FENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARA  253 (1057)
T ss_pred             cccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHH
Confidence            12357889999999999998  889999999999999875

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.38  E-value=4.9e-12  Score=105.53  Aligned_cols=154  Identities=14%  Similarity=0.132  Sum_probs=89.6

Q ss_pred             ccCCCCCCCHHHHH-hccCcC--EEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC
Q 025042           65 GRSENTLPSKEVLQ-LWRTAD--AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS  141 (259)
Q Consensus        65 ~~~g~~v~~~~~~e-~~~~~k--~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (259)
                      ....|-|-|-+-++ .+...+  +|+||+||||+++...-    ..+.......-.. +..+. .+.             
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~----~~G~~~~s~~~~~-~l~g~-~~w-------------  102 (237)
T TIGR01672        42 EQAPIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGF----WRGKKTFSPGSED-YLKNQ-VFW-------------  102 (237)
T ss_pred             ccCCeeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHH----hCCcccCCHHHhh-hhcCh-HHH-------------
Confidence            44456666655554 565443  99999999999976422    1221110000000 00000 111             


Q ss_pred             HHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCC----ccccHHHHHHHcCCCCCcEeecceeecCCCceecccC
Q 025042          142 LSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG----FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA  217 (259)
Q Consensus       142 ~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~----~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~  217 (259)
                       +.+.+.... ...+.+++.++|++++++|++++++|+.    .+.+++.+++.+|++  ++|...+        .+...
T Consensus       103 -~~~~~~~~~-~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~--~~f~~i~--------~~d~~  170 (237)
T TIGR01672       103 -EKVNNGWDE-FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP--AMNPVIF--------AGDKP  170 (237)
T ss_pred             -HHHHHhccc-CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc--hheeEEE--------CCCCC
Confidence             111111111 2356677999999999999999999997    666888999999997  5554322        11111


Q ss_pred             CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          218 NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       218 ~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      .    .+  |.+.. .+.+++|  .++||||+.||+.+++.
T Consensus       171 ~----~~--Kp~~~-~~l~~~~--i~i~vGDs~~DI~aAk~  202 (237)
T TIGR01672       171 G----QY--QYTKT-QWIQDKN--IRIHYGDSDNDITAAKE  202 (237)
T ss_pred             C----CC--CCCHH-HHHHhCC--CeEEEeCCHHHHHHHHH
Confidence            1    11  22222 2345555  48999999999998864

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.38  E-value=5.4e-12  Score=100.75  Aligned_cols=84  Identities=12%  Similarity=0.095  Sum_probs=66.8

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+       +++++|++....++.+++++|+.  .+|...+..            +....++|+++..+.
T Consensus        89 ~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~--~~fd~v~~~------------~~~~~~KP~p~~f~~  147 (175)
T TIGR01493        89 LPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLP--WYFDRAFSV------------DTVRAYKPDPVVYEL  147 (175)
T ss_pred             CCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCH--HHHhhhccH------------hhcCCCCCCHHHHHH
Confidence            568999999998       37899999999999999999986  555432211            111235778899999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+++.|+  ++|+||||+..|+.+++.
T Consensus       148 ~~~~~~~~p~~~l~vgD~~~Di~~A~~  174 (175)
T TIGR01493       148 VFDTVGLPPDRVLMVAAHQWDLIGARK  174 (175)
T ss_pred             HHHHHCCCHHHeEeEecChhhHHHHhc
Confidence            9999898  899999999999999875

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PRK08238 hypothetical protein; Validated

Probab=99.36  E-value=8.4e-12  Score=114.22  Aligned_cols=146  Identities=17%  Similarity=0.188  Sum_probs=94.4

Q ss_pred             CEEEEeCCCcccccchHHHHHHHhcCchhHHHH--HHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHH
Q 025042           84 DAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEW--TARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID  161 (259)
Q Consensus        84 k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~  161 (259)
                      .-++||+||||+.+++..+.....-...+...+  ......+...+.+.+..    ..+        +.....+++|++.
T Consensus        11 ~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~----~~~--------~d~~~lp~~pga~   78 (479)
T PRK08238         11 LPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLAR----RVD--------LDVATLPYNEEVL   78 (479)
T ss_pred             CCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHh----hcC--------CChhhCCCChhHH
Confidence            369999999999998877665543322221111  11111222111111111    000        0111235789999


Q ss_pred             HHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCCC
Q 025042          162 ELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYK  241 (259)
Q Consensus       162 e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~  241 (259)
                      +++++++++|++++++|+..+..++.+++++|+ .+.+++...              ...+.|++|.+.+++...+   +
T Consensus        79 e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl-Fd~Vigsd~--------------~~~~kg~~K~~~l~~~l~~---~  140 (479)
T PRK08238         79 DYLRAERAAGRKLVLATASDERLAQAVAAHLGL-FDGVFASDG--------------TTNLKGAAKAAALVEAFGE---R  140 (479)
T ss_pred             HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC-CCEEEeCCC--------------ccccCCchHHHHHHHHhCc---c
Confidence            999999999999999999999999999999997 225555421              0124567788877655443   4


Q ss_pred             eEEEEecCcccHHhhhcC
Q 025042          242 VLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       242 ~v~~vGDg~ND~~al~~v  259 (259)
                      .+.|+||+.+|+|+++.+
T Consensus       141 ~~~yvGDS~~Dlp~~~~A  158 (479)
T PRK08238        141 GFDYAGNSAADLPVWAAA  158 (479)
T ss_pred             CeeEecCCHHHHHHHHhC
Confidence            588999999999999764

>PHA02597 30

Probab=99.35  E-value=1.1e-11  Score=100.94  Aligned_cols=91  Identities=11%  Similarity=0.125  Sum_probs=63.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|++|++.+ +.+++|+..........+.+++.  .+|....    +..+.+..       .++|++.+..
T Consensus        73 ~~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~--~~f~~~f----~~i~~~~~-------~~~kp~~~~~  138 (197)
T PHA02597         73 LSAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLN--ALFPGAF----SEVLMCGH-------DESKEKLFIK  138 (197)
T ss_pred             ccCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHH--HhCCCcc----cEEEEecc-------CcccHHHHHH
Confidence            568999999999999874 67778887776666677788775  3332110    00011111       1357888998


Q ss_pred             HHHHcCCCeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|-++++||||+.+|+.+++.
T Consensus       139 a~~~~~~~~~v~vgDs~~di~aA~~  163 (197)
T PHA02597        139 AKEKYGDRVVCFVDDLAHNLDAAHE  163 (197)
T ss_pred             HHHHhCCCcEEEeCCCHHHHHHHHH
Confidence            8888874468899999999998864

2 hypothetical protein; Provisional

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.34  E-value=2.8e-11  Score=101.63  Aligned_cols=85  Identities=18%  Similarity=0.214  Sum_probs=64.8

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|++. ++++++|+++..     .+.+|+.  .+|...+..+            .....+++++.+..
T Consensus       112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~--~~fd~i~~~~------------~~~~~KP~p~~~~~  171 (238)
T PRK10748        112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLG--DYFEFVLRAG------------PHGRSKPFSDMYHL  171 (238)
T ss_pred             CCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcH--HhhceeEecc------------cCCcCCCcHHHHHH
Confidence            57889999999999975 889999998765     3667875  5554332111            11235788999999


Q ss_pred             HHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      .++++|+  ++++||||+ ..|+.+++.
T Consensus       172 a~~~~~~~~~~~~~VGD~~~~Di~~A~~  199 (238)
T PRK10748        172 AAEKLNVPIGEILHVGDDLTTDVAGAIR  199 (238)
T ss_pred             HHHHcCCChhHEEEEcCCcHHHHHHHHH
Confidence            9998887  789999999 599998864

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.33  E-value=2.1e-11  Score=97.83  Aligned_cols=170  Identities=16%  Similarity=0.215  Sum_probs=116.8

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCC---CHHHHHHHHHhCCCCCCc
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP---SLSQVQDFLEKRPPRLSP  158 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~p  158 (259)
                      +--+++||+|-|+++.++-..+...++.......+...+..  --+.+++.+.+..+.+   ..+++.+.+..  .++.|
T Consensus        12 ~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~--~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~--iP~~P   87 (256)
T KOG3120|consen   12 PRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPK--GFWNELMDRVFKELHEQGVRIAEIKQVLRS--IPIVP   87 (256)
T ss_pred             CcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhccc--chHHHHHHHHHHHHHHcCCCHHHHHHHHhc--CCCCc
Confidence            33589999999999988766666666655443444333322  1256677766666653   34555566665  57899


Q ss_pred             cHHHHHHHHHHCCC-cEEEEeCCccccHHHHHHHcCCCC--CcEeecceeecCCCceecccCC----CCCc-CCCChHHH
Q 025042          159 GIDELVKKLKANNK-NVYLISGGFRHMINPIASVLGIPP--ENIFANQLLFKSSGEFLGFDAN----EPTS-RSGGKAAA  230 (259)
Q Consensus       159 ~~~e~l~~Lk~~g~-~v~ivTg~~~~~~~~i~~~lgi~~--~~~~~~~l~~~~~~~~~g~~~~----~~~~-~~~~K~~~  230 (259)
                      |+.++++.+++.|. .+.|+|..+..+++.+++.+|+..  ..+|.+--.++++|.+.-...-    ...| ..-.|...
T Consensus        88 gmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~V  167 (256)
T KOG3120|consen   88 GMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLV  167 (256)
T ss_pred             cHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHH
Confidence            99999999999996 799999999999999999999851  1344454456677765422211    1112 12368888


Q ss_pred             HHHHHHHc---CC--CeEEEEecCcccHHh
Q 025042          231 VQQIRKAH---AY--KVLAMIGDGATDLEV  255 (259)
Q Consensus       231 v~~l~~~~---g~--~~v~~vGDg~ND~~a  255 (259)
                      +.++....   |+  ++.+|+|||.||+-.
T Consensus       168 l~~~~~s~~~~gv~yer~iYvGDG~nD~CP  197 (256)
T KOG3120|consen  168 LDELVASQLKDGVRYERLIYVGDGANDFCP  197 (256)
T ss_pred             HHHHHHHHhhcCCceeeEEEEcCCCCCcCc
Confidence            88887653   33  699999999999854

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.32  E-value=1.3e-11  Score=99.39  Aligned_cols=93  Identities=16%  Similarity=0.129  Sum_probs=66.1

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCcc---------------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANE  219 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---------------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~  219 (259)
                      .++||+.++|++|+++|++++++|++..               .....+++.+|+..+.++....           ...+
T Consensus        29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~-----------~~~~   97 (181)
T PRK08942         29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPH-----------HPED   97 (181)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCC-----------CCCC
Confidence            5789999999999999999999998763               1223345566653223332110           0001


Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .....++++..+...++++|+  ++++||||+.+|+.+++.
T Consensus        98 ~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~  138 (181)
T PRK08942         98 GCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAA  138 (181)
T ss_pred             CCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHH
Confidence            112357889999999999987  899999999999999875

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=99.31  E-value=2.1e-11  Score=113.66  Aligned_cols=103  Identities=22%  Similarity=0.246  Sum_probs=74.6

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc-E--------eecceeec-CCCc------------
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN-I--------FANQLLFK-SSGE------------  211 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~-~--------~~~~l~~~-~~~~------------  211 (259)
                      .+++|+++++|+.|.+.+++++|+|||+.-++-++++++|+..-. .        -++++.+. -||.            
T Consensus       674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~  753 (1160)
T KOG0209|consen  674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKT  753 (1160)
T ss_pred             CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccch
Confidence            489999999999999999999999999999999999999974210 0        01111110 0010            


Q ss_pred             ---------eecc-----------------cCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          212 ---------FLGF-----------------DANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       212 ---------~~g~-----------------~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                               ++|.                 .+......|++|--+|..+++. | ..++|.|||.||..|++.
T Consensus       754 ~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-G-y~TLMCGDGTNDVGALK~  824 (1160)
T KOG0209|consen  754 LLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-G-YVTLMCGDGTNDVGALKQ  824 (1160)
T ss_pred             hhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-C-eEEEEecCCCcchhhhhh
Confidence                     0111                 1112445688999999999776 7 599999999999999985

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=99.28  E-value=6.2e-11  Score=108.75  Aligned_cols=96  Identities=22%  Similarity=0.250  Sum_probs=76.7

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH-cCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV-LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~-lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      .++|++.+.+   +++|. .+++|+..+..+++++++ +|++  .+.+++++.+.+|.++|...+...+.++.|...+++
T Consensus       110 ~l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGid--~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~  183 (497)
T PLN02177        110 DVHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGAD--KVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLK  183 (497)
T ss_pred             hcCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCCC--EEEecccEECcCCEEeeeecCCCCCccHHHHHHHHH
Confidence            3677766654   45675 499999999999999976 8997  899999998789999999887545677889998874


Q ss_pred             HHHHcCC-CeEEEEecCcccHHhhhcC
Q 025042          234 IRKAHAY-KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~-~~v~~vGDg~ND~~al~~v  259 (259)
                      ..   |. ...+++|||.||.||++.+
T Consensus       184 ~~---g~~~~~~aYgDS~sD~plL~~a  207 (497)
T PLN02177        184 EF---GDALPDLGLGDRETDHDFMSIC  207 (497)
T ss_pred             Hh---CCCCceEEEECCccHHHHHHhC
Confidence            33   32 2338999999999999865

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.28  E-value=8.7e-12  Score=98.36  Aligned_cols=94  Identities=16%  Similarity=0.175  Sum_probs=69.2

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCC---------------ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGG---------------FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN  218 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~---------------~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~  218 (259)
                      ..++||+.++|++|+++|++++++|+.               ....+..+++.+|+..+.++...           ....
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~-----------~~~~   96 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICP-----------HFPD   96 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECC-----------CCCC
Confidence            357899999999999999999999985               24456777888888422121100           0000


Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +.....++|...++.+.+++++  ++++||||+.+|+.+++.
T Consensus        97 ~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~  138 (161)
T TIGR01261        97 DNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAEN  138 (161)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH
Confidence            1112347899999999999887  789999999999999875

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]

Probab=99.28  E-value=1.8e-12  Score=121.01  Aligned_cols=60  Identities=12%  Similarity=0.200  Sum_probs=55.1

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCccccc
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVD   97 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~   97 (259)
                      +.+-|+++|+|++.-++-+-.+-+.+.++...++|.=++.|.+....+++.|++||||.+
T Consensus       321 i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqn  380 (1019)
T KOG0203|consen  321 IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQN  380 (1019)
T ss_pred             heeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEec
Confidence            788899999999998877777778899999999999999999999999999999999776

>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]

Probab=99.27  E-value=1.8e-11  Score=111.75  Aligned_cols=102  Identities=18%  Similarity=0.207  Sum_probs=75.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEee--cceeecCCCceecc--------cCCCCCcC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFA--NQLLFKSSGEFLGF--------DANEPTSR  223 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~--~~l~~~~~~~~~g~--------~~~~~~~~  223 (259)
                      +++|.+..+.+.+....|..+-|+|||.......-.+++|..- +.|.  +.+..+.++...+.        ..+.....
T Consensus       491 dpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgt-nmypss~llG~~~~~~~~~~~v~elie~adgfAgVf  569 (942)
T KOG0205|consen  491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVF  569 (942)
T ss_pred             CCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhcccc-CcCCchhhccCCCCCCCCCCcHHHHhhhccCccccC
Confidence            4789999999999999999999999999988888888888752 2332  12222222222221        12223345


Q ss_pred             CCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          224 SGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      |++|-++++.++++ + ..|.|.|||.||+|+++.
T Consensus       570 pehKy~iV~~Lq~r-~-hi~gmtgdgvndapaLKk  602 (942)
T KOG0205|consen  570 PEHKYEIVKILQER-K-HIVGMTGDGVNDAPALKK  602 (942)
T ss_pred             HHHHHHHHHHHhhc-C-ceecccCCCcccchhhcc
Confidence            89999999999998 5 689999999999999975

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.27  E-value=3.9e-11  Score=96.15  Aligned_cols=99  Identities=13%  Similarity=0.137  Sum_probs=67.5

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCcc---------------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANE  219 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---------------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~  219 (259)
                      .++||+.++|++|+++|++++++|+...               .....++..+++..+.++.......+.+     ...+
T Consensus        26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~-----~~~~  100 (176)
T TIGR00213        26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVE-----EFRQ  100 (176)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccc-----cccC
Confidence            5789999999999999999999999874               1223455556654323332210000000     0001


Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .....++++..+...++++|+  ++++||||+.+|+.+++.
T Consensus       101 ~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~  141 (176)
T TIGR00213       101 VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVA  141 (176)
T ss_pred             CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHH
Confidence            112357899999999999998  899999999999999875

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=99.26  E-value=4.7e-11  Score=101.71  Aligned_cols=41  Identities=22%  Similarity=0.293  Sum_probs=36.0

Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +....+.+|+.+++.+++++|+  ++|++||||.||++|++.+
T Consensus       182 ei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~a  224 (264)
T COG0561         182 DITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVA  224 (264)
T ss_pred             EEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhc
Confidence            4455667899999999999998  6899999999999999864

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.24  E-value=7.9e-11  Score=97.30  Aligned_cols=38  Identities=18%  Similarity=0.381  Sum_probs=33.8

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+.+|...++.+++++|+  +++++||||.||++|++.+
T Consensus       143 ~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~a  182 (215)
T TIGR01487       143 KKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVV  182 (215)
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhC
Confidence            4467899999999999998  6899999999999999864

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.24  E-value=3.7e-11  Score=91.23  Aligned_cols=85  Identities=16%  Similarity=0.122  Sum_probs=67.3

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCC-ccccHHHHHHHcC-------CCCCcEeecceeecCCCceecccCCCCCcCCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGG-FRHMINPIASVLG-------IPPENIFANQLLFKSSGEFLGFDANEPTSRSGG  226 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~-~~~~~~~i~~~lg-------i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~  226 (259)
                      .++||+.++|++|+++|++++++|+. ....+..+++.++       +.  .+|.....        +        ...+
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~--~~f~~~~~--------~--------~~~p   90 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLA--EYFDPLTI--------G--------YWLP   90 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhH--hhhhhhhh--------c--------CCCc
Confidence            46799999999999999999999999 7877888888887       43  44433210        0        1246


Q ss_pred             hHHHHHHHHHHcC--C--CeEEEEecCcccHHhhh
Q 025042          227 KAAAVQQIRKAHA--Y--KVLAMIGDGATDLEVSI  257 (259)
Q Consensus       227 K~~~v~~l~~~~g--~--~~v~~vGDg~ND~~al~  257 (259)
                      |++.+...++++|  +  ++++||||+..|+...+
T Consensus        91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~  125 (128)
T TIGR01681        91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVD  125 (128)
T ss_pred             HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence            8888999999989  7  89999999999987765

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=99.22  E-value=1e-10  Score=100.06  Aligned_cols=40  Identities=18%  Similarity=0.106  Sum_probs=35.3

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+.+|+.+++.+++.+|+  +++++||||.||++|++.+
T Consensus       182 I~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~a  223 (272)
T PRK15126        182 VLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSV  223 (272)
T ss_pred             eecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHc
Confidence            444556899999999999998  8999999999999999864

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.21  E-value=6.1e-12  Score=100.11  Aligned_cols=93  Identities=11%  Similarity=0.147  Sum_probs=65.7

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCC-ccccHHHHHHHcCCCC-C------cEeecceeecCCCceecccCCCCCcCCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGG-FRHMINPIASVLGIPP-E------NIFANQLLFKSSGEFLGFDANEPTSRSG  225 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~-~~~~~~~i~~~lgi~~-~------~~~~~~l~~~~~~~~~g~~~~~~~~~~~  225 (259)
                      ..++||+.++|+.|+++|+++.++|+. ....++.+++.+|+.. .      ++|...+        .+..    ...++
T Consensus        44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv--------~~~~----~~~~k  111 (174)
T TIGR01685        44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRI--------EIYK----PNKAK  111 (174)
T ss_pred             EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeee--------eccC----CchHH
Confidence            578999999999999999999999987 8888899999998741 0      2222211        1111    01122


Q ss_pred             ChHHHHHHHHHHc--CC--CeEEEEecCcccHHhhhc
Q 025042          226 GKAAAVQQIRKAH--AY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       226 ~K~~~v~~l~~~~--g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +-..+++.+.+.+  |+  ++++||||+..|+.+++.
T Consensus       112 p~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~  148 (174)
T TIGR01685       112 QLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWG  148 (174)
T ss_pred             HHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHH
Confidence            3344566665554  45  899999999999999864

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.21  E-value=1e-10  Score=97.44  Aligned_cols=38  Identities=24%  Similarity=0.316  Sum_probs=33.7

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+.+|+.+++.+++++|+  +++++||||.||++|++.+
T Consensus       153 ~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~a  192 (230)
T PRK01158        153 SPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVA  192 (230)
T ss_pred             eCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhc
Confidence            3456799999999999998  7899999999999999864

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.21  E-value=1.3e-10  Score=92.15  Aligned_cols=87  Identities=13%  Similarity=0.119  Sum_probs=66.0

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccc------------cHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRH------------MINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSR  223 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~------------~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~  223 (259)
                      ++||+.++|++|+++|++++++|+....            .++.+++++|++  . +. .+ ..+           ....
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~-~~-ii-~~~-----------~~~~  106 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--I-QV-LA-ATH-----------AGLY  106 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--E-EE-EE-ecC-----------CCCC
Confidence            6799999999999999999999987653            356788999985  2 11 11 000           0012


Q ss_pred             CCChHHHHHHHHHHcC--C--CeEEEEecCc--------ccHHhhhc
Q 025042          224 SGGKAAAVQQIRKAHA--Y--KVLAMIGDGA--------TDLEVSIF  258 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g--~--~~v~~vGDg~--------ND~~al~~  258 (259)
                      +++++..++.+.+++|  +  ++++||||+.        +|+.+++.
T Consensus       107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~  153 (166)
T TIGR01664       107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKN  153 (166)
T ss_pred             CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHH
Confidence            4678889999999888  6  7899999996        69999875

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK10976 putative hydrolase; Provisional

Probab=99.18  E-value=2.3e-10  Score=97.53  Aligned_cols=40  Identities=25%  Similarity=0.311  Sum_probs=34.8

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      .+....+|+.+++.+++.+|+  +++++||||.||++|++.+
T Consensus       184 I~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~a  225 (266)
T PRK10976        184 VMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMA  225 (266)
T ss_pred             EEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHc
Confidence            334456899999999999998  8999999999999999864

>PRK06769 hypothetical protein; Validated

Probab=99.17  E-value=2.4e-10  Score=91.32  Aligned_cols=91  Identities=19%  Similarity=0.167  Sum_probs=66.7

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccc--------cHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRH--------MINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGG  226 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~--------~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~  226 (259)
                      .++||+.++|++|+++|++++++|+....        .....++.+|++  .++.....           ..+.....++
T Consensus        28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~~-----------~~~~~~~~KP   94 (173)
T PRK06769         28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD--DIYLCPHK-----------HGDGCECRKP   94 (173)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC--EEEECcCC-----------CCCCCCCCCC
Confidence            57899999999999999999999987642        123335667775  44432110           0011123578


Q ss_pred             hHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          227 KAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       227 K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ++..+++.+++++.  ++++||||+.+|+.+++.
T Consensus        95 ~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~  128 (173)
T PRK06769         95 STGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAK  128 (173)
T ss_pred             CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHH
Confidence            99999999999887  799999999999999875

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.16  E-value=7.8e-10  Score=91.85  Aligned_cols=89  Identities=15%  Similarity=0.149  Sum_probs=71.0

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++|+.++++ ++++++|++....+...++++|+.  .+|...+..++-|            .++|..++.+.
T Consensus        98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~--~~Fd~v~~s~~~g------------~~KP~~~~f~~  162 (229)
T COG1011          98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL--DYFDAVFISEDVG------------VAKPDPEIFEY  162 (229)
T ss_pred             CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh--hhhheEEEecccc------------cCCCCcHHHHH
Confidence            57899999999999988 999999999999999999999986  6665554332211            25678889999


Q ss_pred             HHHHcCC--CeEEEEecCcc-cHHhhh
Q 025042          234 IRKAHAY--KVLAMIGDGAT-DLEVSI  257 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~N-D~~al~  257 (259)
                      .++++|+  ++++||||+.. |+..++
T Consensus       163 ~~~~~g~~p~~~l~VgD~~~~di~gA~  189 (229)
T COG1011         163 ALEKLGVPPEEALFVGDSLENDILGAR  189 (229)
T ss_pred             HHHHcCCCcceEEEECCChhhhhHHHH
Confidence            9999998  78999999764 635444

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.15  E-value=2.7e-10  Score=90.75  Aligned_cols=81  Identities=19%  Similarity=0.352  Sum_probs=66.9

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCc-cccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGF-RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~-~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      .++|++.++|+.|+++|++++++|+.. ...++.+.+.+|+.   .+..                    ..++++..+..
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~---~~~~--------------------~~KP~p~~~~~   99 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP---VLPH--------------------AVKPPGCAFRR   99 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE---EEcC--------------------CCCCChHHHHH
Confidence            467899999999999999999999988 67777788888874   2111                    13678889999


Q ss_pred             HHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      +++++|+  ++++||||+. .|+.+++.
T Consensus       100 ~l~~~~~~~~~~l~IGDs~~~Di~aA~~  127 (170)
T TIGR01668       100 AHPEMGLTSEQVAVVGDRLFTDVMGGNR  127 (170)
T ss_pred             HHHHcCCCHHHEEEECCcchHHHHHHHH
Confidence            9999888  7899999998 79999875

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=99.14  E-value=7.3e-11  Score=87.11  Aligned_cols=83  Identities=25%  Similarity=0.453  Sum_probs=73.8

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      -.+++.+.+.+++|.+. +++++.|||...+....++..|++.+.+|+.                   ..++.|.++++.
T Consensus        29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~-------------------a~~e~K~~ii~e   88 (152)
T COG4087          29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAG-------------------ADPEMKAKIIRE   88 (152)
T ss_pred             cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecc-------------------cCHHHHHHHHHH
Confidence            46889999999999999 9999999999999999999999986566654                   246889999999


Q ss_pred             HHHHcCCCeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      |.+++  ..|+|||||.||.+|++.
T Consensus        89 Lkk~~--~k~vmVGnGaND~laLr~  111 (152)
T COG4087          89 LKKRY--EKVVMVGNGANDILALRE  111 (152)
T ss_pred             hcCCC--cEEEEecCCcchHHHhhh
Confidence            99874  799999999999999975

>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=99.14  E-value=7.5e-11  Score=111.93  Aligned_cols=60  Identities=17%  Similarity=0.133  Sum_probs=50.9

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCccccc
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVD   97 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~   97 (259)
                      .++--.-+|-++|...+-.-..+.+|+.+.||-=-|++.+-..++++++|||||||||++
T Consensus       423 LDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEd  482 (1140)
T KOG0208|consen  423 LDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTED  482 (1140)
T ss_pred             hcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCccccc
Confidence            555566778888887776666778999999999999999988999999999999999875

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=99.11  E-value=5.4e-10  Score=95.42  Aligned_cols=40  Identities=15%  Similarity=0.252  Sum_probs=35.4

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+.+|+.+++.+++.+|+  +++++||||.||++|++.+
T Consensus       190 I~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~a  231 (270)
T PRK10513        190 ILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYA  231 (270)
T ss_pred             EeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhC
Confidence            444567899999999999998  7999999999999999864

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.09  E-value=2.2e-09  Score=88.85  Aligned_cols=90  Identities=11%  Similarity=0.070  Sum_probs=70.5

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc---CCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL---GIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA  229 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l---gi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~  229 (259)
                      ...++||+.++|++|+++|++++|+|++.....+.+.+++   ++.  .+|...+..              ...++++++
T Consensus        93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~--~~f~~~fd~--------------~~g~KP~p~  156 (220)
T TIGR01691        93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT--PYFSGYFDT--------------TVGLKTEAQ  156 (220)
T ss_pred             ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh--hhcceEEEe--------------CcccCCCHH
Confidence            3469999999999999999999999999888878777775   343  223221100              012477899


Q ss_pred             HHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          230 AVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       230 ~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+.++++++|+  ++++||||+..|+.+++.
T Consensus       157 ~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~  187 (220)
T TIGR01691       157 SYVKIAGQLGSPPREILFLSDIINELDAARK  187 (220)
T ss_pred             HHHHHHHHhCcChhHEEEEeCCHHHHHHHHH
Confidence            99999999998  789999999999999875

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.07  E-value=1.2e-09  Score=90.60  Aligned_cols=40  Identities=15%  Similarity=0.198  Sum_probs=34.8

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+.+|...++.+++++|+  +++++|||+.||++|++.+
T Consensus       143 i~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~a  184 (225)
T TIGR01482       143 ILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVP  184 (225)
T ss_pred             EeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhc
Confidence            334457899999999999998  7899999999999999863

catalyze the same reaction as SPP.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.05  E-value=1.1e-09  Score=96.52  Aligned_cols=93  Identities=17%  Similarity=0.200  Sum_probs=66.7

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCC---------------ccccHHHHHHHcCCCCCcEeecceeecCCCceecccC-
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGG---------------FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA-  217 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~---------------~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~-  217 (259)
                      ..++||+.++|++|+++|++++|+|+.               ....+..+++.+|+..+.++..            ... 
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~------------~~~~   96 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLIC------------PHFP   96 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEe------------CCcC
Confidence            468999999999999999999999994               1333555667777742111110            000 


Q ss_pred             CCCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          218 NEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       218 ~~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+.....++|+..+..+.+++++  ++++||||+.+|+.+++.
T Consensus        97 sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~  139 (354)
T PRK05446         97 EDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAEN  139 (354)
T ss_pred             cccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH
Confidence            11112347899999999888877  799999999999999875

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.05  E-value=1.3e-09  Score=91.07  Aligned_cols=86  Identities=16%  Similarity=0.215  Sum_probs=60.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCC----ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGG----FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA  229 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~----~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~  229 (259)
                      ..++||+.++|+.|+++|++++++|+.    ...+++.+++.+|++.++.|...+        .+..     ..-.+|..
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil--------~gd~-----~~K~~K~~  179 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIF--------AGDK-----PGQYTKTQ  179 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEE--------cCCC-----CCCCCHHH
Confidence            568899999999999999999999994    455778888889995335553322        1111     01124544


Q ss_pred             HHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          230 AVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       230 ~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      .+    ++++  .++||||+.+|+.+++.
T Consensus       180 ~l----~~~~--i~I~IGDs~~Di~aA~~  202 (237)
T PRK11009        180 WL----KKKN--IRIFYGDSDNDITAARE  202 (237)
T ss_pred             HH----HhcC--CeEEEcCCHHHHHHHHH
Confidence            33    3454  59999999999998864

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=99.03  E-value=2.2e-09  Score=89.76  Aligned_cols=38  Identities=16%  Similarity=0.266  Sum_probs=34.3

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+.+|+.+++.+++.+|+  +++++|||+.||++|++.+
T Consensus       182 ~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~  221 (254)
T PF08282_consen  182 PKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELA  221 (254)
T ss_dssp             ETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHS
T ss_pred             eCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhc
Confidence            4467899999999999998  8999999999999999864

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=99.02  E-value=6.3e-09  Score=88.21  Aligned_cols=129  Identities=15%  Similarity=0.241  Sum_probs=85.5

Q ss_pred             cCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccH
Q 025042           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGI  160 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~  160 (259)
                      .+..+|+||+|+|+.++........               .++. +             .+.+...++.......+.||+
T Consensus        73 ~kp~AVV~DIDeTvLdns~y~~~~~---------------~~~~-~-------------~~~~~w~~wv~~~~a~~ipGA  123 (266)
T TIGR01533        73 DKKYAIVLDLDETVLDNSPYQGYQV---------------LNNK-P-------------FDPETWDKWVQAAQAKPVAGA  123 (266)
T ss_pred             CCCCEEEEeCccccccChHHHHHHh---------------cCCC-c-------------CCHHHHHHHHHcCCCCcCccH
Confidence            3457999999999988653211000               0100 0             122334455555556789999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCccccH---HHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHH
Q 025042          161 DELVKKLKANNKNVYLISGGFRHMI---NPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKA  237 (259)
Q Consensus       161 ~e~l~~Lk~~g~~v~ivTg~~~~~~---~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~  237 (259)
                      .++++.|+++|++++++|+......   ...++.+|++  .++...+...+              ...+|....+.+.+.
T Consensus       124 ~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~--~~~~d~lllr~--------------~~~~K~~rr~~I~~~  187 (266)
T TIGR01533       124 LDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP--QADEEHLLLKK--------------DKSSKESRRQKVQKD  187 (266)
T ss_pred             HHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC--CCCcceEEeCC--------------CCCCcHHHHHHHHhc
Confidence            9999999999999999999765443   3667788996  32222222111              124688888888776


Q ss_pred             cCCCeEEEEecCcccHHhh
Q 025042          238 HAYKVLAMIGDGATDLEVS  256 (259)
Q Consensus       238 ~g~~~v~~vGDg~ND~~al  256 (259)
                      +  +-+++|||..+|+...
T Consensus       188 y--~Ivl~vGD~~~Df~~~  204 (266)
T TIGR01533       188 Y--EIVLLFGDNLLDFDDF  204 (266)
T ss_pred             C--CEEEEECCCHHHhhhh
Confidence            6  4699999999999654

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.01  E-value=1.9e-10  Score=98.26  Aligned_cols=89  Identities=16%  Similarity=0.188  Sum_probs=55.2

Q ss_pred             CccHHHHHHHHHHCCCcEEEEeCCc-----cccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          157 SPGIDELVKKLKANNKNVYLISGGF-----RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       157 ~p~~~e~l~~Lk~~g~~v~ivTg~~-----~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      .++..++++.++..+..+.+.+...     ....+.+.+.+++.  ..+..            ....+....+.+|+..+
T Consensus       139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~------------~~~~ei~~~~~~K~~~l  204 (272)
T PRK10530        139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLE--CEWSW------------HDQVDIARKGNSKGKRL  204 (272)
T ss_pred             eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCce--EEEec------------CceEEEecCCCChHHHH
Confidence            3556667777666665555555432     12233344444542  11110            00112233456899999


Q ss_pred             HHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          232 QQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +.+++++|+  +++++||||.||++|++.+
T Consensus       205 ~~l~~~~gi~~~e~i~~GD~~NDi~m~~~a  234 (272)
T PRK10530        205 TQWVEAQGWSMKNVVAFGDNFNDISMLEAA  234 (272)
T ss_pred             HHHHHHcCCCHHHeEEeCCChhhHHHHHhc
Confidence            999999998  7999999999999999863

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.00  E-value=4.2e-09  Score=90.16  Aligned_cols=41  Identities=20%  Similarity=0.186  Sum_probs=35.4

Q ss_pred             CCCcCCCChHHHHHHHHHHcCC-----CeEEEEecCcccHHhhhcC
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY-----KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~-----~~v~~vGDg~ND~~al~~v  259 (259)
                      +.+....+|+.+++.+++.+|+     ++|++||||.||++|++++
T Consensus       180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~a  225 (271)
T PRK03669        180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVM  225 (271)
T ss_pred             EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhC
Confidence            3445567899999999999886     6899999999999999864

>PLN02811 hydrolase

Probab=98.99  E-value=5.5e-09  Score=86.65  Aligned_cols=94  Identities=13%  Similarity=0.194  Sum_probs=65.9

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHH-HHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINP-IASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~-i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ...++||+.++|+.|+++|++++++|+..+..... ..+..++.  ++|...+.        +.. . ....++++++.+
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~--~~f~~i~~--------~~~-~-~~~~~KP~p~~~  143 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF--SLMHHVVT--------GDD-P-EVKQGKPAPDIF  143 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH--hhCCEEEE--------CCh-h-hccCCCCCcHHH
Confidence            35789999999999999999999999987654443 33333443  33332211        000 0 011346788888


Q ss_pred             HHHHHHcC---C--CeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAHA---Y--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g---~--~~v~~vGDg~ND~~al~~  258 (259)
                      ....+++|   +  ++|+||||+..|+.+++.
T Consensus       144 ~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~  175 (220)
T PLN02811        144 LAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN  175 (220)
T ss_pred             HHHHHHhCCCCCCccceEEEeccHhhHHHHHH
Confidence            88888876   6  789999999999999875

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=98.99  E-value=9e-10  Score=110.39  Aligned_cols=106  Identities=20%  Similarity=0.229  Sum_probs=77.0

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc--Ee--ec-ceee---------------------
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN--IF--AN-QLLF---------------------  206 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~--~~--~~-~l~~---------------------  206 (259)
                      .++++|+++++++.|++.|++++|+|||+.+++..++.+.|+-..+  .+  .. ....                     
T Consensus       629 eD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~  708 (1057)
T TIGR01652       629 EDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNN  708 (1057)
T ss_pred             hhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhh
Confidence            4589999999999999999999999999999999999999874211  11  00 0000                     


Q ss_pred             --cCCC---ceeccc----------------------CCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          207 --KSSG---EFLGFD----------------------ANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       207 --~~~~---~~~g~~----------------------~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                        ....   .++|..                      ...-.+.|++|..+++.+++..| +.|+|+|||.||++|++.+
T Consensus       709 ~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~-~~vl~iGDG~ND~~mlk~A  787 (1057)
T TIGR01652       709 LGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTG-KTTLAIGDGANDVSMIQEA  787 (1057)
T ss_pred             hccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCC-CeEEEEeCCCccHHHHhhc
Confidence              0000   011110                      01234669999999999998756 7999999999999999863

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>PLN02887 hydrolase family protein

Probab=98.98  E-value=4.5e-09  Score=98.21  Aligned_cols=40  Identities=20%  Similarity=0.292  Sum_probs=35.0

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ++..+.+|+.+++.+++.+|+  ++|++||||.||++|++.+
T Consensus       501 I~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~A  542 (580)
T PLN02887        501 IVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLA  542 (580)
T ss_pred             EecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHC
Confidence            334456899999999999999  7999999999999999864

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=98.95  E-value=1.1e-09  Score=100.73  Aligned_cols=105  Identities=15%  Similarity=0.165  Sum_probs=74.7

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCC-C---cEeecceeec------------CCC--ceec
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPP-E---NIFANQLLFK------------SSG--EFLG  214 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~-~---~~~~~~l~~~------------~~~--~~~g  214 (259)
                      ++++.++++..++.||+.|++++|+|||.-+++..+++.-++-. .   +++...-.-.            .+.  .+.|
T Consensus       656 EDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G  735 (1051)
T KOG0210|consen  656 EDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDG  735 (1051)
T ss_pred             HHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcC
Confidence            45788999999999999999999999999999999888766521 0   1221110000            000  0111


Q ss_pred             cc---------------------CCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          215 FD---------------------ANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       215 ~~---------------------~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      ..                     ...-.|.|.+|++.++.++++-| ..|++||||-||..|++.
T Consensus       736 ~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~-krvc~IGDGGNDVsMIq~  799 (1051)
T KOG0210|consen  736 ESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTG-KRVCAIGDGGNDVSMIQA  799 (1051)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhC-ceEEEEcCCCccchheee
Confidence            00                     00124779999999999999988 899999999999999864

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=98.95  E-value=8.5e-09  Score=87.42  Aligned_cols=40  Identities=25%  Similarity=0.326  Sum_probs=34.8

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+.+|...++.+++.+|+  +++++|||+.||++|++.+
T Consensus       182 I~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~  223 (256)
T TIGR00099       182 ITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAA  223 (256)
T ss_pred             ecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhC
Confidence            344466899999999999988  7999999999999999863

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01686 FkbH FkbH-like domain

Probab=98.91  E-value=2.9e-09  Score=93.35  Aligned_cols=84  Identities=17%  Similarity=0.135  Sum_probs=71.8

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH----cCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV----LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~----lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      +++++.++|+.|+++|+.+.++|+.....+..++++    +++.  ++|....                 ...++|++.+
T Consensus        32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~--~~f~~~~-----------------~~~~pk~~~i   92 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQA--EDFDARS-----------------INWGPKSESL   92 (320)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcH--HHeeEEE-----------------EecCchHHHH
Confidence            578999999999999999999999999999999998    8876  5554421                 1246899999


Q ss_pred             HHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++.+++|+  ++++||||+..|+.+.+.
T Consensus        93 ~~~~~~l~i~~~~~vfidD~~~d~~~~~~  121 (320)
T TIGR01686        93 RKIAKKLNLGTDSFLFIDDNPAERANVKI  121 (320)
T ss_pred             HHHHHHhCCCcCcEEEECCCHHHHHHHHH
Confidence            999999988  899999999999988764

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.88  E-value=2.2e-08  Score=85.79  Aligned_cols=38  Identities=18%  Similarity=0.162  Sum_probs=32.8

Q ss_pred             CcCCCChHHHHHHHHHHcCC---CeEEEEecCcccHHhhhcC
Q 025042          221 TSRSGGKAAAVQQIRKAHAY---KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~---~~v~~vGDg~ND~~al~~v  259 (259)
                      .... +|..+++++++.+|+   +++++||||.||++|++.+
T Consensus       186 ~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~a  226 (273)
T PRK00192        186 LGGG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAA  226 (273)
T ss_pred             eCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhC
Confidence            3445 899999999998876   6899999999999999864

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.87  E-value=2.8e-08  Score=84.54  Aligned_cols=36  Identities=22%  Similarity=0.062  Sum_probs=30.8

Q ss_pred             CCChHHHHHHHHHHcCCC----eEEEEecCcccHHhhhcC
Q 025042          224 SGGKAAAVQQIRKAHAYK----VLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~~----~v~~vGDg~ND~~al~~v  259 (259)
                      ..+|.++++.|.+.++-.    .++.+|||.||++||+++
T Consensus       206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~  245 (302)
T PRK12702        206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWS  245 (302)
T ss_pred             CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhC
Confidence            458999999999887642    799999999999999874

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.86  E-value=1.6e-08  Score=85.11  Aligned_cols=83  Identities=18%  Similarity=0.249  Sum_probs=59.3

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHH--HHHHHcCCCCCc-EeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMIN--PIASVLGIPPEN-IFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~--~i~~~lgi~~~~-~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      .++||+.++|++|+++|++++++|+..+...+  ..++++|++  . .|...+.                 ...--...+
T Consensus        24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~--~~~~~~Ii~-----------------s~~~~~~~l   84 (242)
T TIGR01459        24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN--ADLPEMIIS-----------------SGEIAVQMI   84 (242)
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC--ccccceEEc-----------------cHHHHHHHH
Confidence            35799999999999999999999998877666  678899996  3 3333220                 011112455


Q ss_pred             HHHHHHcCC--CeEEEEecCcccHHhh
Q 025042          232 QQIRKAHAY--KVLAMIGDGATDLEVS  256 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~ND~~al  256 (259)
                      .+..++++.  ++++++||+.+|+..+
T Consensus        85 ~~~~~~~~~~~~~~~~vGd~~~d~~~~  111 (242)
T TIGR01459        85 LESKKRFDIRNGIIYLLGHLENDIINL  111 (242)
T ss_pred             HhhhhhccCCCceEEEeCCcccchhhh
Confidence            555555554  6799999999988765

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=98.83  E-value=2.2e-08  Score=81.86  Aligned_cols=41  Identities=22%  Similarity=0.170  Sum_probs=35.3

Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +....+.+|..+++.+++++++  +++++|||+.||++|++.+
T Consensus       156 ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~  198 (204)
T TIGR01484       156 EVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVA  198 (204)
T ss_pred             EEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHc
Confidence            3445567999999999999987  7899999999999999863

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=98.78  E-value=5.8e-08  Score=80.83  Aligned_cols=36  Identities=14%  Similarity=0.196  Sum_probs=31.8

Q ss_pred             CCChHHHHHHHHHHcCC----CeEEEEecCcccHHhhhcC
Q 025042          224 SGGKAAAVQQIRKAHAY----KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~----~~v~~vGDg~ND~~al~~v  259 (259)
                      +.+|..+++.+++.+++    .++++|||+.||++|++.+
T Consensus       179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~a  218 (225)
T TIGR02461       179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVV  218 (225)
T ss_pred             CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhC
Confidence            67899999999998865    4799999999999999864

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.76  E-value=2.6e-08  Score=86.43  Aligned_cols=98  Identities=16%  Similarity=0.105  Sum_probs=69.8

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc-EeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN-IFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~-~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ..++|++.++++.|+++|++++++|+......+..++.+++.  . +|......+....+.-     ....+++++..+.
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~--~~~f~~i~~~~~~~~~~~-----~~~~~kp~p~~~~  258 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT--DIWFDDLIGRPPDMHFQR-----EQGDKRPDDVVKE  258 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc--CCchhhhhCCcchhhhcc-----cCCCCCCcHHHHH
Confidence            578999999999999999999999999999999999999885  3 4433221110000000     0112355666666


Q ss_pred             HHHHHcCC---CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY---KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~---~~v~~vGDg~ND~~al~~  258 (259)
                      ..+++.+.   ++++||||+.+|+.+++.
T Consensus       259 ~~l~~~~~~~~~~~~~vgD~~~d~~~a~~  287 (300)
T PHA02530        259 EIFWEKIAPKYDVLLAVDDRDQVVDMWRR  287 (300)
T ss_pred             HHHHHHhccCceEEEEEcCcHHHHHHHHH
Confidence            66665554   689999999999999874

>PLN03190 aminophospholipid translocase; Provisional

Probab=98.76  E-value=1e-08  Score=102.94  Aligned_cols=106  Identities=18%  Similarity=0.204  Sum_probs=74.8

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc--Ee-e--cc-------ee----------ec---
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN--IF-A--NQ-------LL----------FK---  207 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~--~~-~--~~-------l~----------~~---  207 (259)
                      .+++++++.++++.|++.|++++|+|||+..++..++...++-..+  .+ -  +.       +.          ..   
T Consensus       724 ~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~  803 (1178)
T PLN03190        724 EDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGI  803 (1178)
T ss_pred             ecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccc
Confidence            3589999999999999999999999999999999999987763211  00 0  00       00          00   


Q ss_pred             -CC-------------CceecccC----------------------CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcc
Q 025042          208 -SS-------------GEFLGFDA----------------------NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGAT  251 (259)
Q Consensus       208 -~~-------------~~~~g~~~----------------------~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~N  251 (259)
                       .+             -.+.|...                      ..-.+.|.+|..+++.+++..+ ..|+|+|||.|
T Consensus       804 ~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~-~vtlaIGDGaN  882 (1178)
T PLN03190        804 SQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTS-DMTLAIGDGAN  882 (1178)
T ss_pred             cccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCC-cEEEEECCCcc
Confidence             00             00111100                      0124679999999999988755 68999999999


Q ss_pred             cHHhhhcC
Q 025042          252 DLEVSIFI  259 (259)
Q Consensus       252 D~~al~~v  259 (259)
                      |++|++.+
T Consensus       883 Dv~mIq~A  890 (1178)
T PLN03190        883 DVSMIQMA  890 (1178)
T ss_pred             hHHHHHhc
Confidence            99999863

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=98.73  E-value=1.1e-07  Score=81.21  Aligned_cols=40  Identities=20%  Similarity=0.278  Sum_probs=34.5

Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +......+|+.+++++++.+|+  +.+++|||+.||.+|+++
T Consensus       167 Ei~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~  208 (266)
T PRK10187        167 EIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAV  208 (266)
T ss_pred             EeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHH
Confidence            3444556899999999999987  789999999999999985

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=98.72  E-value=5.9e-07  Score=74.03  Aligned_cols=163  Identities=18%  Similarity=0.167  Sum_probs=98.0

Q ss_pred             cCcCEEEEeCCCcccccch-----HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC--CCHHHH----HHHH
Q 025042           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQV----QDFL  149 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i----~~~~  149 (259)
                      ..+..++||+||||++++.     +..+...++.... ..+..+. .|. .-.+........+.  -+.+++    ++..
T Consensus         8 ~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~-~~~~~~~-mG~-~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~   84 (222)
T KOG2914|consen    8 LKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYP-WDVKVKS-MGK-RTSEAARLFVKKLPDPVSREEFNKEEEEIL   84 (222)
T ss_pred             cceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCCh-HHHHHHH-cCC-CHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence            4578999999999998763     3334444443221 1222222 222 22233222222221  122222    1122


Q ss_pred             Hh--CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcC-CCCCcEeecceeecCCCceecccCCCCCcCCCC
Q 025042          150 EK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLG-IPPENIFANQLLFKSSGEFLGFDANEPTSRSGG  226 (259)
Q Consensus       150 ~~--~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lg-i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~  226 (259)
                      ..  ....+.||+..+++.|+.+|+++.++|+..+...+...+.++ +-  ..|...+..++          .....+++
T Consensus        85 ~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~--~~f~~~v~~d~----------~~v~~gKP  152 (222)
T KOG2914|consen   85 DRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIF--KNFSHVVLGDD----------PEVKNGKP  152 (222)
T ss_pred             HHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHH--HhcCCCeecCC----------ccccCCCC
Confidence            22  135688999999999999999999999999988888777665 32  22332221111          11123567


Q ss_pred             hHHHHHHHHHHcCC---CeEEEEecCcccHHhhhc
Q 025042          227 KAAAVQQIRKAHAY---KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       227 K~~~v~~l~~~~g~---~~v~~vGDg~ND~~al~~  258 (259)
                      .++......+.+|.   +.|++|.|+.+.+.|+++
T Consensus       153 ~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~a  187 (222)
T KOG2914|consen  153 DPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKA  187 (222)
T ss_pred             CchHHHHHHHhcCCCCccceEEECCCHHHHHHHHh
Confidence            77777777777776   689999999999998875

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=98.72  E-value=5.6e-08  Score=89.79  Aligned_cols=86  Identities=17%  Similarity=0.196  Sum_probs=64.9

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCcc------------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFR------------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSR  223 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~------------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~  223 (259)
                      ++|++.+.|+.|++.|++++|+|+...            ..+..+++++|++.+.+++..                ....
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~----------------~~~~  261 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVPFQVFIAIG----------------AGFY  261 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCceEEEEeCC----------------CCCC
Confidence            579999999999999999999998655            346778899998632222110                0112


Q ss_pred             CCChHHHHHHHHHHcC----C--CeEEEEecCcccHHhhh
Q 025042          224 SGGKAAAVQQIRKAHA----Y--KVLAMIGDGATDLEVSI  257 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g----~--~~v~~vGDg~ND~~al~  257 (259)
                      .+++...+..+.++++    +  ++++||||..+|+.+.+
T Consensus       262 RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~  301 (526)
T TIGR01663       262 RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGK  301 (526)
T ss_pred             CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHH
Confidence            4778889999988874    4  79999999999987643

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=98.72  E-value=4.5e-08  Score=82.74  Aligned_cols=40  Identities=23%  Similarity=0.306  Sum_probs=34.9

Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +......+|..+++.+++.+|+  +++++|||+.||++|++.
T Consensus       160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~  201 (249)
T TIGR01485       160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEI  201 (249)
T ss_pred             EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHc
Confidence            3444567999999999999997  799999999999999975

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>smart00775 LNS2 LNS2 domain

Probab=98.72  E-value=1.1e-07  Score=74.69  Aligned_cols=98  Identities=15%  Similarity=0.199  Sum_probs=61.3

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHH---HHHHH-----cCCCCCcEeecceeecCCCceecccCCCC-CcCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMIN---PIASV-----LGIPPENIFANQLLFKSSGEFLGFDANEP-TSRSG  225 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~---~i~~~-----lgi~~~~~~~~~l~~~~~~~~~g~~~~~~-~~~~~  225 (259)
                      ...|++.++++.++++|++++++||.....+.   .+++.     .+++...++.      .++.+......+. ...+.
T Consensus        27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~------~~g~~~~~~~~e~i~~~~~  100 (157)
T smart00775       27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLL------SPDRLFAALHREVISKKPE  100 (157)
T ss_pred             cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEE------cCCcchhhhhcccccCCHH
Confidence            34689999999999999999999998777664   56665     2344222222      1222211001111 11222


Q ss_pred             -ChHHHHHHHHHHcC---CCeEEEEecCcccHHhhhc
Q 025042          226 -GKAAAVQQIRKAHA---YKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       226 -~K~~~v~~l~~~~g---~~~v~~vGDg~ND~~al~~  258 (259)
                       -|.+.++.+.+.+.   ..-++.|||+.+|+.+=+.
T Consensus       101 ~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~  137 (157)
T smart00775      101 VFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSA  137 (157)
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHH
Confidence             38889999988543   2455679999999987553

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=98.67  E-value=1.9e-07  Score=72.29  Aligned_cols=78  Identities=22%  Similarity=0.299  Sum_probs=63.9

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      ...|++.+.++.+++.|++++++|+..+.-+..+++.+|++  .++..                     .+|=...+++.
T Consensus        46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~--fi~~A---------------------~KP~~~~fr~A  102 (175)
T COG2179          46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP--FIYRA---------------------KKPFGRAFRRA  102 (175)
T ss_pred             CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc--eeecc---------------------cCccHHHHHHH
Confidence            45688999999999999999999999999999999999996  33332                     35566788888


Q ss_pred             HHHcCC--CeEEEEecCc-ccHHh
Q 025042          235 RKAHAY--KVLAMIGDGA-TDLEV  255 (259)
Q Consensus       235 ~~~~g~--~~v~~vGDg~-ND~~a  255 (259)
                      +++.++  ++|+||||.. +|+-+
T Consensus       103 l~~m~l~~~~vvmVGDqL~TDVlg  126 (175)
T COG2179         103 LKEMNLPPEEVVMVGDQLFTDVLG  126 (175)
T ss_pred             HHHcCCChhHEEEEcchhhhhhhc
Confidence            888888  8999999975 35543

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=98.58  E-value=5.5e-07  Score=84.68  Aligned_cols=37  Identities=14%  Similarity=0.223  Sum_probs=32.6

Q ss_pred             CCCChHHHHHHHHHHcCC--CeEEEE--ecCcccHHhhhcC
Q 025042          223 RSGGKAAAVQQIRKAHAY--KVLAMI--GDGATDLEVSIFI  259 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~--~~v~~v--GDg~ND~~al~~v  259 (259)
                      ...+|..+++.+++.+|+  ++++.|  |||.||++|++++
T Consensus       610 ~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~A  650 (694)
T PRK14502        610 GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETV  650 (694)
T ss_pred             CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhC
Confidence            367999999999999987  677888  9999999999864

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.56  E-value=1.6e-06  Score=71.97  Aligned_cols=90  Identities=18%  Similarity=0.104  Sum_probs=67.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..+-+++.+++++||+.|..+.++|+..... +.++..+|+.  .+|...+...+.            -..+|.+.+.+.
T Consensus       112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~--~~fD~vv~S~e~------------g~~KPDp~If~~  176 (237)
T KOG3085|consen  112 WKYLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLS--AYFDFVVESCEV------------GLEKPDPRIFQL  176 (237)
T ss_pred             ceeccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHH--Hhhhhhhhhhhh------------ccCCCChHHHHH
Confidence            3566788899999999998888888765544 4777788885  555544321111            124778899999


Q ss_pred             HHHHcCC--CeEEEEec-CcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGD-GATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGD-g~ND~~al~~  258 (259)
                      .+++.|.  ++|+++|| ..||+..++.
T Consensus       177 al~~l~v~Pee~vhIgD~l~nD~~gA~~  204 (237)
T KOG3085|consen  177 ALERLGVKPEECVHIGDLLENDYEGARN  204 (237)
T ss_pred             HHHHhCCChHHeEEecCccccccHhHHH
Confidence            9999998  89999999 5789998875

>TIGR01675 plant-AP plant acid phosphatase

Probab=98.49  E-value=2e-06  Score=71.27  Aligned_cols=131  Identities=19%  Similarity=0.243  Sum_probs=82.4

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHH
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID  161 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~  161 (259)
                      ..++++||+|.|+.++........ .+              ++ .             .......+++.....+..|++.
T Consensus        76 g~~A~V~DIDET~LsN~py~~~~~-~g--------------~~-~-------------~~~~~~~~wv~~~~apaip~al  126 (229)
T TIGR01675        76 GMDAWIFDVDDTLLSNIPYYKKHG-YG--------------TE-K-------------TDPTAFWLWLGKGAAPALPEGL  126 (229)
T ss_pred             CCcEEEEccccccccCHHHHHHhc-cC--------------CC-c-------------CCHHHHHHHHHcCCCCCCHHHH
Confidence            578999999999988653111110 11              00 0             1123345566655567899999


Q ss_pred             HHHHHHHHCCCcEEEEeCCcccc---HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCc-CCCChHHHHHHHHHH
Q 025042          162 ELVKKLKANNKNVYLISGGFRHM---INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTS-RSGGKAAAVQQIRKA  237 (259)
Q Consensus       162 e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~-~~~~K~~~v~~l~~~  237 (259)
                      ++++.++++|++++++||.....   ....+.+.|++  . +. .+....        ..+... .-.-|...-+++.++
T Consensus       127 ~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~--~-~~-~LiLR~--------~~d~~~~~~~yKs~~R~~l~~~  194 (229)
T TIGR01675       127 KLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT--G-WK-HLILRG--------LEDSNKTVVTYKSEVRKSLMEE  194 (229)
T ss_pred             HHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC--C-cC-eeeecC--------CCCCCchHhHHHHHHHHHHHhC
Confidence            99999999999999999987655   45566778886  2 12 221110        000000 001166777777765


Q ss_pred             cCCCeEEEEecCcccHH
Q 025042          238 HAYKVLAMIGDGATDLE  254 (259)
Q Consensus       238 ~g~~~v~~vGDg~ND~~  254 (259)
                       |++-+..|||..+|+.
T Consensus       195 -GYrIv~~iGDq~sDl~  210 (229)
T TIGR01675       195 -GYRIWGNIGDQWSDLL  210 (229)
T ss_pred             -CceEEEEECCChHHhc
Confidence             6688999999999984

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=98.48  E-value=7e-07  Score=74.29  Aligned_cols=115  Identities=19%  Similarity=0.330  Sum_probs=78.5

Q ss_pred             CHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCC--cEeecceeecCCCceecccCC
Q 025042          141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPE--NIFANQLLFKSSGEFLGFDAN  218 (259)
Q Consensus       141 ~~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~--~~~~~~l~~~~~~~~~g~~~~  218 (259)
                      ....+.+.+.+....+|+|+.++++.|.++++++.|+|++....++.++++.|.-++  +++++.+.||++|.+.|+.-+
T Consensus        76 ~k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~  155 (246)
T PF05822_consen   76 TKSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGP  155 (246)
T ss_dssp             BGGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS
T ss_pred             CHHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCC
Confidence            456677778777789999999999999999999999999999999999998875433  578999999999999998764


Q ss_pred             CCCcCCCChHHHHHH---HHHHcC-CCeEEEEecCcccHHhhh
Q 025042          219 EPTSRSGGKAAAVQQ---IRKAHA-YKVLAMIGDGATDLEVSI  257 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~---l~~~~g-~~~v~~vGDg~ND~~al~  257 (259)
                      .+  ..-.|......   +.++.. ..+++..||+..|+.|+.
T Consensus       156 lI--H~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~  196 (246)
T PF05822_consen  156 LI--HTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMAD  196 (246)
T ss_dssp             -----TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTT
T ss_pred             ce--EEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhc
Confidence            33  33456653331   122222 178999999999999975

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=98.48  E-value=1.1e-06  Score=71.42  Aligned_cols=171  Identities=15%  Similarity=0.217  Sum_probs=103.0

Q ss_pred             EEEeCCCcccccc-hHHHHHHHhcCchhHHHHHHHHcCCCCcHH---------HHHHHHHhhc--CC-CHHHHHHHHHhC
Q 025042           86 VCFDVDSTVCVDE-GIDELAEFCGAGKAVAEWTARAMGGSVPFE---------EALAARLSLF--KP-SLSQVQDFLEKR  152 (259)
Q Consensus        86 vvFD~DGTLt~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~--~~-~~~~i~~~~~~~  152 (259)
                      ++||+.|.+.-.+ ..+..+....++...-.....+-. .+.++         ..+.-....+  .+ ..+.+.++ .+.
T Consensus         3 fvtD~EGP~sl~D~A~E~~a~~~pngrrfF~~~SeyDD-~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~-sE~   80 (315)
T COG4030           3 FVTDWEGPWSLTDFALELCAAVFPNGRRFFSNLSEYDD-YLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRI-SEL   80 (315)
T ss_pred             ccccCCCCCccchhHHHHHHHHcCCHHHHHHhhhhhhh-HHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHH-HHh
Confidence            7899999996554 455555666666533222211100 00000         0011111111  12 12223333 333


Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCc-----------------eecc
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGE-----------------FLGF  215 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~-----------------~~g~  215 (259)
                      ..++.||+.++++.|++. ..-+++|.+.++.++.++..+|++..+++.+.+.+|+-..                 +.|.
T Consensus        81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~ge  159 (315)
T COG4030          81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGE  159 (315)
T ss_pred             hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHH
Confidence            357899999999999876 5667888889999999999999987778777776652110                 0000


Q ss_pred             --------------------cCC-CCCcCCCChHHHHHHHHHHcCC-CeEEEEecCcccHHhhhcC
Q 025042          216 --------------------DAN-EPTSRSGGKAAAVQQIRKAHAY-KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       216 --------------------~~~-~~~~~~~~K~~~v~~l~~~~g~-~~v~~vGDg~ND~~al~~v  259 (259)
                                          +.. -....+..|+.+++.+++.-++ ...++||||++|..|++++
T Consensus       160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~  225 (315)
T COG4030         160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAA  225 (315)
T ss_pred             HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHh
Confidence                                000 0112345688889999888777 4579999999999999863

>PLN02645 phosphoglycolate phosphatase

Probab=98.47  E-value=1.3e-06  Score=76.24  Aligned_cols=71  Identities=17%  Similarity=0.314  Sum_probs=56.5

Q ss_pred             CCCCCHHHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHH
Q 025042           69 NTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDF  148 (259)
Q Consensus        69 ~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  148 (259)
                      -..+..+..+.+.++|+++||+||||..+.                                                  
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~D~DGtl~~~~--------------------------------------------------   43 (311)
T PLN02645         14 QLLTLENADELIDSVETFIFDCDGVIWKGD--------------------------------------------------   43 (311)
T ss_pred             ccCCHHHHHHHHHhCCEEEEeCcCCeEeCC--------------------------------------------------
Confidence            344455667778899999999999997642                                                  


Q ss_pred             HHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHH---HHcCCC
Q 025042          149 LEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIA---SVLGIP  195 (259)
Q Consensus       149 ~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~---~~lgi~  195 (259)
                            .+.||+.++|++|+++|++++++||......+.++   +++|++
T Consensus        44 ------~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~   87 (311)
T PLN02645         44 ------KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN   87 (311)
T ss_pred             ------ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence                  24589999999999999999999998877766655   567874

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=98.46  E-value=2.8e-07  Score=71.66  Aligned_cols=87  Identities=16%  Similarity=0.220  Sum_probs=62.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|++|+ .+++++|+|+..+..++.+++++++.. .+|...+ ..++           .  ...|+. +.+
T Consensus        44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~-~~f~~i~-~~~d-----------~--~~~KP~-~~k  106 (148)
T smart00577       44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKK-YFGYRRL-FRDE-----------C--VFVKGK-YVK  106 (148)
T ss_pred             EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCC-CEeeeEE-ECcc-----------c--cccCCe-Eee
Confidence            467999999999998 579999999999999999999999851 2223221 1110           0  112333 333


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhh
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSI  257 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~  257 (259)
                      ..+++|.  ++|+||||+.+|+.+.+
T Consensus       107 ~l~~l~~~p~~~i~i~Ds~~~~~aa~  132 (148)
T smart00577      107 DLSLLGRDLSNVIIIDDSPDSWPFHP  132 (148)
T ss_pred             cHHHcCCChhcEEEEECCHHHhhcCc
Confidence            3455566  89999999999999875

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=98.45  E-value=1.2e-07  Score=80.55  Aligned_cols=92  Identities=14%  Similarity=0.085  Sum_probs=61.6

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR  235 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~  235 (259)
                      .+++..+.++.|++.+.++++.|+............+|+.  .++.. +..        .....+...++++...++...
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g--~~~~~-i~~--------~~~~~~~~~gKP~p~~~~~~~  189 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG--PFVTA-LEY--------ATDTKATVVGKPSKTFFLEAL  189 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch--HHHHH-HHH--------HhCCCceeecCCCHHHHHHHH
Confidence            3567788888888888888888887666555444445543  33321 100        001111123578889999999


Q ss_pred             HHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          236 KAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       236 ~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      +++|.  ++++||||+. +|+.+++.
T Consensus       190 ~~~~~~~~~~~~vGD~~~~Di~~a~~  215 (257)
T TIGR01458       190 RATGCEPEEAVMIGDDCRDDVGGAQD  215 (257)
T ss_pred             HHhCCChhhEEEECCCcHHHHHHHHH
Confidence            99887  8999999996 89998764

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=98.41  E-value=6.6e-07  Score=74.63  Aligned_cols=98  Identities=19%  Similarity=0.292  Sum_probs=63.7

Q ss_pred             HHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHH---HHHHHcCCCC-CcEeecceeecCCCceecccCCCCC
Q 025042          146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN---PIASVLGIPP-ENIFANQLLFKSSGEFLGFDANEPT  221 (259)
Q Consensus       146 ~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~---~i~~~lgi~~-~~~~~~~l~~~~~~~~~g~~~~~~~  221 (259)
                      .++.........|++.++++.++++|++++++||.....-.   .-+.+.|++. ++.+..           +.......
T Consensus       106 ~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr-----------~~~~~~~~  174 (229)
T PF03767_consen  106 DEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILR-----------PDKDPSKK  174 (229)
T ss_dssp             HHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEE-----------EESSTSS-
T ss_pred             HHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccc-----------cccccccc
Confidence            44555444467899999999999999999999997655333   3466778752 121111           00000000


Q ss_pred             cCCCChHHHHHHHHHHcCCCeEEEEecCcccHHh
Q 025042          222 SRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEV  255 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~a  255 (259)
                      ....-|....+.+.++ |++-+++|||..+|+..
T Consensus       175 ~~~~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~  207 (229)
T PF03767_consen  175 SAVEYKSERRKEIEKK-GYRIIANIGDQLSDFSG  207 (229)
T ss_dssp             -----SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred             cccccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence            1123588888888888 65789999999999875

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=98.40  E-value=1.3e-06  Score=75.07  Aligned_cols=91  Identities=13%  Similarity=0.087  Sum_probs=56.4

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHH-HHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMIN-PIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~-~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      .++++.++++.|+++|. ++++|+....... ......|..  .++.. +..     .++   .+....+++.+..++.+
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g--~~~~~-i~~-----~~g---~~~~~~gKP~p~~~~~~  211 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTG--SLVAA-IET-----ASG---RQPLVVGKPSPYMFECI  211 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChH--HHHHH-HHH-----HhC---CceeccCCCCHHHHHHH
Confidence            46788999999988886 6778876543321 111122221  12111 100     001   11122357788899999


Q ss_pred             HHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          235 RKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       235 ~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      ++++|+  ++++||||+ .+|+.+++.
T Consensus       212 ~~~~~~~~~~~lmIGD~~~tDI~~A~~  238 (279)
T TIGR01452       212 TENFSIDPARTLMVGDRLETDILFGHR  238 (279)
T ss_pred             HHHhCCChhhEEEECCChHHHHHHHHH
Confidence            998887  899999999 499998864

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK10444 UMP phosphatase; Provisional

Probab=98.40  E-value=1.7e-06  Score=73.15  Aligned_cols=38  Identities=11%  Similarity=0.055  Sum_probs=32.4

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      ...+++++..++.++++++.  ++++||||+. +|+.+++.
T Consensus       170 ~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~  210 (248)
T PRK10444        170 FYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ  210 (248)
T ss_pred             cccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHH
Confidence            34468899999999999887  8999999997 89998865

>TIGR01684 viral_ppase viral phosphatase

Probab=98.40  E-value=1.1e-06  Score=74.89  Aligned_cols=44  Identities=23%  Similarity=0.252  Sum_probs=39.9

Q ss_pred             CCC-ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEe
Q 025042          155 RLS-PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIF  200 (259)
Q Consensus       155 ~~~-p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~  200 (259)
                      +++ |++.++|++|+++|++++++|++.+..+...++++|++  .+|
T Consensus       145 ~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd--~YF  189 (301)
T TIGR01684       145 RIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLD--RYF  189 (301)
T ss_pred             ccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCC--ccc
Confidence            355 99999999999999999999999999999999999997  555

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=98.39  E-value=4.3e-06  Score=66.63  Aligned_cols=93  Identities=16%  Similarity=0.179  Sum_probs=64.0

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCC---------------ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGG---------------FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANE  219 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~---------------~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~  219 (259)
                      .+.|++.+.+..|++.|++++++|+-               ........++..|+..+.++..            ...++
T Consensus        31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~C------------ph~p~   98 (181)
T COG0241          31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYC------------PHHPE   98 (181)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEEC------------CCCCC
Confidence            46799999999999999999999982               1111233444555432232221            11111


Q ss_pred             C-CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 P-TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~-~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      . ..-.+||...+.++.+++++  .+.++|||...|+.++..+
T Consensus        99 ~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~  141 (181)
T COG0241          99 DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENA  141 (181)
T ss_pred             CCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHC
Confidence            1 11237899999999999887  8999999999999988653

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=98.37  E-value=4.4e-06  Score=70.65  Aligned_cols=37  Identities=19%  Similarity=0.166  Sum_probs=31.7

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      ..++++...++.+++++++  ++++||||+. +|+.+++.
T Consensus       175 ~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~  214 (249)
T TIGR01457       175 YIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGID  214 (249)
T ss_pred             ccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHH
Confidence            3457889999999999887  7899999997 89998865

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.31  E-value=6.1e-06  Score=65.11  Aligned_cols=82  Identities=21%  Similarity=0.353  Sum_probs=54.9

Q ss_pred             CCCccHHHHHHHHHHCCCc--EEEEeCC-------ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCC
Q 025042          155 RLSPGIDELVKKLKANNKN--VYLISGG-------FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG  225 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~--v~ivTg~-------~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~  225 (259)
                      .+.|...+.++++++.+..  +.|+|++       ....++.+.+.+|++   ++-...                 ..|.
T Consensus        59 ~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp---vl~h~~-----------------kKP~  118 (168)
T PF09419_consen   59 EIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP---VLRHRA-----------------KKPG  118 (168)
T ss_pred             cCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc---EEEeCC-----------------CCCc
Confidence            4567788888888887654  9999997       366688899999995   332210                 2355


Q ss_pred             ChHHHHHHHHHHcC---CCeEEEEecCc-ccHHhh
Q 025042          226 GKAAAVQQIRKAHA---YKVLAMIGDGA-TDLEVS  256 (259)
Q Consensus       226 ~K~~~v~~l~~~~g---~~~v~~vGDg~-ND~~al  256 (259)
                      ...++++.+..+-+   .++++||||-. +|+-+.
T Consensus       119 ~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~g  153 (168)
T PF09419_consen  119 CFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMG  153 (168)
T ss_pred             cHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHh
Confidence            55566666654411   27999999954 466554

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=98.28  E-value=1e-05  Score=68.28  Aligned_cols=97  Identities=20%  Similarity=0.301  Sum_probs=60.7

Q ss_pred             HHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCcccc---HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcC
Q 025042          147 DFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHM---INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSR  223 (259)
Q Consensus       147 ~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~  223 (259)
                      ++......+..|++.++.+.++++|++++++||.....   ...-+.+.|++.   . +.+.....+...      ....
T Consensus       137 ~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~---~-~~LiLR~~~D~~------~~~a  206 (275)
T TIGR01680       137 EFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT---W-EKLILKDPQDNS------AENA  206 (275)
T ss_pred             HHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC---c-ceeeecCCCCCc------cchh
Confidence            45555556788999999999999999999999975432   234456678852   1 222211110000      0000


Q ss_pred             CCChHHHHHHHHHHcCCCeEEEEecCcccHH
Q 025042          224 SGGKAAAVQQIRKAHAYKVLAMIGDGATDLE  254 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~  254 (259)
                      .+-|...-+++.++ |++-+..|||..+|+.
T Consensus       207 v~yKs~~R~~li~e-GYrIv~~iGDq~sDl~  236 (275)
T TIGR01680       207 VEYKTAARAKLIQE-GYNIVGIIGDQWNDLK  236 (275)
T ss_pred             HHHHHHHHHHHHHc-CceEEEEECCCHHhcc
Confidence            12355555666555 6688999999999984

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.27  E-value=1.6e-05  Score=64.41  Aligned_cols=108  Identities=14%  Similarity=0.267  Sum_probs=74.7

Q ss_pred             HHHHHHHHHhC----CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccC
Q 025042          142 LSQVQDFLEKR----PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA  217 (259)
Q Consensus       142 ~~~i~~~~~~~----~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~  217 (259)
                      ..+..+++...    ...+.+-.+++|-.|+.++  .++.|+..+..+..++++||+.  +.|...+-++-...+    .
T Consensus        83 ~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGie--DcFegii~~e~~np~----~  154 (244)
T KOG3109|consen   83 ADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIE--DCFEGIICFETLNPI----E  154 (244)
T ss_pred             HHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChH--HhccceeEeeccCCC----C
Confidence            45555565542    2356677788888887764  7899999999999999999997  666654433211110    0


Q ss_pred             CCCCcCCCChHHHHHHHHHHcCC---CeEEEEecCcccHHhhhcC
Q 025042          218 NEPTSRSGGKAAAVQQIRKAHAY---KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       218 ~~~~~~~~~K~~~v~~l~~~~g~---~~v~~vGDg~ND~~al~~v  259 (259)
                      ....|.  |-.++.+...+.-|+   ++++||-||.+-+..++.+
T Consensus       155 ~~~vcK--P~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~v  197 (244)
T KOG3109|consen  155 KTVVCK--PSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEV  197 (244)
T ss_pred             Cceeec--CCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhc
Confidence            122344  456678888887787   7999999999999887653

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.26  E-value=2.9e-06  Score=72.34  Aligned_cols=44  Identities=20%  Similarity=0.206  Sum_probs=39.4

Q ss_pred             CCC-ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEe
Q 025042          155 RLS-PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIF  200 (259)
Q Consensus       155 ~~~-p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~  200 (259)
                      ++| |++.++|++|+++|++++++|++.+..++..++.+|++  .+|
T Consensus       147 ~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~--~yF  191 (303)
T PHA03398        147 RIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE--GYF  191 (303)
T ss_pred             ccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC--ccc
Confidence            355 89999999999999999999999999999999999997  444

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.24  E-value=9e-07  Score=70.01  Aligned_cols=89  Identities=15%  Similarity=0.141  Sum_probs=54.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeC-CccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISG-GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg-~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ..++|++.+.|++|+++|+++.+.|- +..+.++.+++.|+++........+         ..........|.+|..-++
T Consensus        44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~---------~~~F~~~eI~~gsK~~Hf~  114 (169)
T PF12689_consen   44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPL---------IEYFDYLEIYPGSKTTHFR  114 (169)
T ss_dssp             E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-------------------CCECEEEESSS-HHHHHH
T ss_pred             EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccc---------hhhcchhheecCchHHHHH
Confidence            57899999999999999999999994 5677899999999996100000000         0000001134679999999


Q ss_pred             HHHHHcCC--CeEEEEecCcc
Q 025042          233 QIRKAHAY--KVLAMIGDGAT  251 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~N  251 (259)
                      ++.+..|+  ++++||-|-..
T Consensus       115 ~i~~~tgI~y~eMlFFDDe~~  135 (169)
T PF12689_consen  115 RIHRKTGIPYEEMLFFDDESR  135 (169)
T ss_dssp             HHHHHH---GGGEEEEES-HH
T ss_pred             HHHHhcCCChhHEEEecCchh
Confidence            99999898  89999988544

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=98.23  E-value=8.6e-06  Score=63.36  Aligned_cols=98  Identities=15%  Similarity=0.191  Sum_probs=60.9

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCcccc---HHHHHHHc-----CCCCCcEeecceeecCCCceecccCCCCCcCC-CC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHM---INPIASVL-----GIPPENIFANQLLFKSSGEFLGFDANEPTSRS-GG  226 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~l-----gi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~-~~  226 (259)
                      .++|+.++++.++++|+++.-+|+.....   .+.+++..     ++++..++.+     .++.+....-.-....| +-
T Consensus        28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~s-----P~~l~~al~rEvi~~~p~~f  102 (157)
T PF08235_consen   28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLS-----PDSLFSALHREVISKDPEEF  102 (157)
T ss_pred             hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEEC-----CcchhhhhhccccccChHHH
Confidence            46899999999999999999999864333   34455555     6664333322     11111110000000112 35


Q ss_pred             hHHHHHHHHHHcC---CCeEEEEecCcccHHhhhc
Q 025042          227 KAAAVQQIRKAHA---YKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       227 K~~~v~~l~~~~g---~~~v~~vGDg~ND~~al~~  258 (259)
                      |..+++.++..+.   ..-.+.||...+|+.+-+.
T Consensus       103 K~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~  137 (157)
T PF08235_consen  103 KIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKA  137 (157)
T ss_pred             HHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHH
Confidence            9999999998743   2567889999999987554

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=98.20  E-value=4e-05  Score=64.73  Aligned_cols=37  Identities=22%  Similarity=0.298  Sum_probs=31.4

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +...+|..+++.+++++++  ++++++|||-||++|+..
T Consensus       161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~  199 (247)
T PF05116_consen  161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEG  199 (247)
T ss_dssp             ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCC
T ss_pred             cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcC
Confidence            3467899999999999998  789999999999999853

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.19  E-value=1.2e-05  Score=58.32  Aligned_cols=41  Identities=24%  Similarity=0.352  Sum_probs=31.2

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHH---HHHcCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPI---ASVLGIP  195 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i---~~~lgi~  195 (259)
                      .+.||+.++++.|+++|.+++++|++.....+.+   ++.+|++
T Consensus        14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~   57 (101)
T PF13344_consen   14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP   57 (101)
T ss_dssp             EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred             CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence            3579999999999999999999999876664443   4667885

...

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=98.16  E-value=1.3e-05  Score=77.79  Aligned_cols=40  Identities=28%  Similarity=0.330  Sum_probs=33.6

Q ss_pred             CCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      +..+...+|+.+++.+++..+.+.+++|||+.||.+|++.
T Consensus       650 eV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~  689 (726)
T PRK14501        650 EVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRA  689 (726)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHh
Confidence            3445567899999999996555899999999999999975

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=98.13  E-value=3.8e-06  Score=83.29  Aligned_cols=105  Identities=20%  Similarity=0.207  Sum_probs=73.2

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc---Eeeccee------------------------
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN---IFANQLL------------------------  205 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~---~~~~~l~------------------------  205 (259)
                      ++++-+|++|.|+.|+++|++++++|||..+++-.++...++-.++   ++-+...                        
T Consensus       649 EDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~  728 (1151)
T KOG0206|consen  649 EDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEE  728 (1151)
T ss_pred             echhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHH
Confidence            6789999999999999999999999999999999998877653211   0000000                        


Q ss_pred             -------ecC-CC--ceecccCC----------------------CCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccH
Q 025042          206 -------FKS-SG--EFLGFDAN----------------------EPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDL  253 (259)
Q Consensus       206 -------~~~-~~--~~~g~~~~----------------------~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~  253 (259)
                             ... +.  .+.|+...                      .=...|.+|+..++..++..+ ..+++||||.||.
T Consensus       729 ~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~-~~TLAIGDGANDV  807 (1151)
T KOG0206|consen  729 LEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLK-AVTLAIGDGANDV  807 (1151)
T ss_pred             HHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCC-ceEEEeeCCCccc
Confidence                   000 00  01111100                      012347789999999977766 6999999999999


Q ss_pred             Hhhhc
Q 025042          254 EVSIF  258 (259)
Q Consensus       254 ~al~~  258 (259)
                      +|++.
T Consensus       808 sMIQ~  812 (1151)
T KOG0206|consen  808 SMIQE  812 (1151)
T ss_pred             hheee
Confidence            99874

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.06  E-value=4.7e-06  Score=65.54  Aligned_cols=81  Identities=20%  Similarity=0.296  Sum_probs=52.6

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCC---cc-----------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGG---FR-----------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPT  221 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~---~~-----------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~  221 (259)
                      +.|++.+.|++|.+.|+.++|+|+-   .+           ..++.+++.++++- .++...-    .          ..
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~-~~~~a~~----~----------d~   94 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPI-QVYAAPH----K----------DP   94 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-E-EEEECGC----S----------ST
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCce-EEEecCC----C----------CC
Confidence            4468999999999999999999974   11           22345677788862 2222210    0          11


Q ss_pred             cCCCChHHHHHHHHHHcC----C--CeEEEEecCccc
Q 025042          222 SRSGGKAAAVQQIRKAHA----Y--KVLAMIGDGATD  252 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g----~--~~v~~vGDg~ND  252 (259)
                      + .+|+.-.++.+.+.++    +  ++++||||..+|
T Consensus        95 ~-RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr  130 (159)
T PF08645_consen   95 C-RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGR  130 (159)
T ss_dssp             T-STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred             C-CCCchhHHHHHHHhccccccccccceEEEeccCCC
Confidence            2 3678888888887764    2  789999998665

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=97.98  E-value=8.1e-05  Score=61.23  Aligned_cols=127  Identities=19%  Similarity=0.298  Sum_probs=84.5

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHH
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID  161 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~  161 (259)
                      +.++|+.|+|-|+.++..-.-+.-.-+                             ....++....|.......+.||+.
T Consensus        78 K~~aVvlDlDETvLdNs~Yqgy~v~nn-----------------------------k~f~pe~Wd~wV~a~~sk~vpGA~  128 (274)
T COG2503          78 KKKAVVLDLDETVLDNSAYQGYQVLNN-----------------------------KGFTPETWDKWVQAKKSKAVPGAV  128 (274)
T ss_pred             CCceEEEecchHhhcCccccchhhhcC-----------------------------CCCCccchHHHHhhcccccCccHH
Confidence            445999999999988663111110000                             012345566777776678899999


Q ss_pred             HHHHHHHHCCCcEEEEeCCcccc-H---HHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHH
Q 025042          162 ELVKKLKANNKNVYLISGGFRHM-I---NPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKA  237 (259)
Q Consensus       162 e~l~~Lk~~g~~v~ivTg~~~~~-~---~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~  237 (259)
                      ||+++.-++|..++.+|+..++. .   ..-+.++|++  .+--..+.+-              -..++|....+...+.
T Consensus       129 eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~--~~~~~~~llk--------------k~~k~Ke~R~~~v~k~  192 (274)
T COG2503         129 EFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLP--QVLESHLLLK--------------KDKKSKEVRRQAVEKD  192 (274)
T ss_pred             HHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcc--cccccceEEe--------------eCCCcHHHHHHHHhhc
Confidence            99999999999999999876655 2   2335678887  3322222221              1135677777777665


Q ss_pred             cCCCeEEEEecCcccHHh
Q 025042          238 HAYKVLAMIGDGATDLEV  255 (259)
Q Consensus       238 ~g~~~v~~vGDg~ND~~a  255 (259)
                      +  ..|+.|||..+|...
T Consensus       193 ~--~iVm~vGDNl~DF~d  208 (274)
T COG2503         193 Y--KIVMLVGDNLDDFGD  208 (274)
T ss_pred             c--ceeeEecCchhhhcc
Confidence            4  789999999999754

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=97.90  E-value=0.00013  Score=66.57  Aligned_cols=91  Identities=13%  Similarity=0.087  Sum_probs=63.1

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH-cCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV-LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~-lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      ++++   .++..++.| +++++|...+-.++++++. +|.+  .+.+.++++.+.|.++|...+.. + .+.|...+   
T Consensus        97 v~~e---~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D--~VvGTEL~v~~~G~~TG~~~G~n-~-~ek~~~rl---  165 (498)
T PLN02499         97 VDME---AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD--EVIGSELVVNRFGFATGFIRGTD-V-DQSVANRV---  165 (498)
T ss_pred             CCHH---HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc--eEEeeeEEEeeccEEEEEEecCc-c-HHHHHHHH---
Confidence            5555   555667778 8999999999999999998 9997  88899999876689999876432 2 22234444   


Q ss_pred             HHHcCC-CeEEEEecCcccHHhhh
Q 025042          235 RKAHAY-KVLAMIGDGATDLEVSI  257 (259)
Q Consensus       235 ~~~~g~-~~v~~vGDg~ND~~al~  257 (259)
                      ++.+|- ...+=+||...|-+-+.
T Consensus       166 ~~~~g~~~~~vg~~~~~~~~~f~~  189 (498)
T PLN02499        166 ANLFVDERPQLGLGRISASSSFLS  189 (498)
T ss_pred             HHHhCccCceecccCCcccchhhh
Confidence            444442 23555677666655443

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.89  E-value=2.2e-05  Score=64.99  Aligned_cols=39  Identities=21%  Similarity=0.202  Sum_probs=34.5

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ...+.+|+.+++.+++++|+  ++|++||||.||++|++++
T Consensus       174 ~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~a  214 (221)
T TIGR02463       174 LGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVA  214 (221)
T ss_pred             ecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhC
Confidence            34566899999999999998  7899999999999999864

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=97.78  E-value=0.00028  Score=62.13  Aligned_cols=39  Identities=21%  Similarity=0.318  Sum_probs=36.6

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc-C
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL-G  193 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l-g  193 (259)
                      ...|++.++|++|+++|+++.|+|++....++.+++.+ |
T Consensus       184 ~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g  223 (343)
T TIGR02244       184 LRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG  223 (343)
T ss_pred             ccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence            56899999999999999999999999999999999986 6

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=97.77  E-value=5.6e-05  Score=64.22  Aligned_cols=57  Identities=25%  Similarity=0.375  Sum_probs=47.4

Q ss_pred             HhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCC
Q 025042           78 QLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLS  157 (259)
Q Consensus        78 e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  157 (259)
                      +.+.++++++||+||||..+.                                                        .+.
T Consensus         3 ~~~~~y~~~l~DlDGvl~~G~--------------------------------------------------------~~i   26 (269)
T COG0647           3 DVMDKYDGFLFDLDGVLYRGN--------------------------------------------------------EAI   26 (269)
T ss_pred             chhhhcCEEEEcCcCceEeCC--------------------------------------------------------ccC
Confidence            456789999999999997654                                                        356


Q ss_pred             ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHH
Q 025042          158 PGIDELVKKLKANNKNVYLISGGFRHMINPIAS  190 (259)
Q Consensus       158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~  190 (259)
                      ||+.++|+.|+++|++++++||+.....+.+.+
T Consensus        27 pga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~   59 (269)
T COG0647          27 PGAAEALKRLKAAGKPVIFLTNNSTRSREVVAA   59 (269)
T ss_pred             chHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Confidence            999999999999999999999987777664433

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.74  E-value=0.00041  Score=56.42  Aligned_cols=84  Identities=14%  Similarity=0.136  Sum_probs=44.2

Q ss_pred             ccHHHHHHHHHHCCCcEEEEeCCcccc---HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          158 PGIDELVKKLKANNKNVYLISGGFRHM---INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      |.....|..+++.-  ..|+.-+....   ....++..|+.  .+++...-.           ...  ...+|..+.+.+
T Consensus       137 pre~aaLa~~rEys--eti~~rs~d~~~~~~~~~L~e~glt--~v~garf~~-----------v~~--as~gKg~Aa~~l  199 (274)
T COG3769         137 PREQAALAMLREYS--ETIIWRSSDERMAQFTARLNERGLT--FVHGARFWH-----------VLD--ASAGKGQAANWL  199 (274)
T ss_pred             ChHHhHHHHHHHhh--hheeecccchHHHHHHHHHHhcCce--EEeccceEE-----------Eec--cccCccHHHHHH
Confidence            34444566666643  34444443332   23456677775  333332210           000  123355555544


Q ss_pred             HHHc---CC-CeEEEEecCcccHHhhhc
Q 025042          235 RKAH---AY-KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       235 ~~~~---g~-~~v~~vGDg~ND~~al~~  258 (259)
                      .+.+   +. +.++.+|||.||+|++.-
T Consensus       200 l~~y~rl~~~r~t~~~GDg~nD~Pl~ev  227 (274)
T COG3769         200 LETYRRLGGARTTLGLGDGPNDAPLLEV  227 (274)
T ss_pred             HHHHHhcCceeEEEecCCCCCcccHHHh
Confidence            4433   33 569999999999999863

>COG4996 Predicted phosphatase [General function prediction only]

Probab=97.71  E-value=5.3e-05  Score=56.40  Aligned_cols=78  Identities=15%  Similarity=0.129  Sum_probs=58.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCC-ChHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG-GKAAAVQ  232 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~-~K~~~v~  232 (259)
                      .+++|.++++++++|+.|+-+...|=+..+.+-..++.+++.  ++|.-.+.                 .|. -|...+.
T Consensus        40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~--~yFhy~Vi-----------------ePhP~K~~ML~  100 (164)
T COG4996          40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL--QYFHYIVI-----------------EPHPYKFLMLS  100 (164)
T ss_pred             EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh--hhEEEEEe-----------------cCCChhHHHHH
Confidence            578999999999999999999999988888888899999997  77765431                 122 2555555


Q ss_pred             HHHHHc----CC----CeEEEEecCc
Q 025042          233 QIRKAH----AY----KVLAMIGDGA  250 (259)
Q Consensus       233 ~l~~~~----g~----~~v~~vGDg~  250 (259)
                      ++....    +.    .+++|+-|-.
T Consensus       101 ~llr~i~~er~~~ikP~~Ivy~DDR~  126 (164)
T COG4996         101 QLLREINTERNQKIKPSEIVYLDDRR  126 (164)
T ss_pred             HHHHHHHHhhccccCcceEEEEeccc
Confidence            554433    32    6888888753

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=97.57  E-value=0.0024  Score=50.51  Aligned_cols=93  Identities=17%  Similarity=0.201  Sum_probs=60.9

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.+.|++-++.|.+++|.|++.-...+-+..+..-       ..+    ++.+.|+..-  ...++-......
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~a-------gdL----~~lfsGyfDt--tiG~KrE~~SY~  167 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDA-------GDL----NSLFSGYFDT--TIGKKRESQSYA  167 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhccccc-------ccH----Hhhhcceeec--cccccccchhHH
Confidence            457999999999999999999999998866544443332211       000    1111221111  122333444667


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ++....|+  .+++|..|.++.+.|++-
T Consensus       168 kIa~~iGl~p~eilFLSDn~~EL~AA~~  195 (229)
T COG4229         168 KIAGDIGLPPAEILFLSDNPEELKAAAG  195 (229)
T ss_pred             HHHHhcCCCchheEEecCCHHHHHHHHh
Confidence            77777787  899999999999988874

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.57  E-value=0.00011  Score=60.87  Aligned_cols=194  Identities=17%  Similarity=0.201  Sum_probs=112.1

Q ss_pred             cccccCCCCCCCHHHHHhc-c-------CcCEEEEeCCCcccccch---------HHHHHHHhcCc-----hhHHHHHHH
Q 025042           62 SALGRSENTLPSKEVLQLW-R-------TADAVCFDVDSTVCVDEG---------IDELAEFCGAG-----KAVAEWTAR  119 (259)
Q Consensus        62 ~~~~~~g~~v~~~~~~e~~-~-------~~k~vvFD~DGTLt~~~~---------~~~l~~~~~~~-----~~~~~~~~~  119 (259)
                      ..+...-+.+|++...|.. .       ..-.++.|+|=||+.-..         ...+-......     .....++.+
T Consensus         9 ~~l~~~~v~vkdp~~v~~~l~~~v~gga~~~~vIsdfd~TLSrfa~~~G~r~pS~~~Vfd~~~~~~~~e~~~k~~~Lyhk   88 (298)
T KOG3128|consen    9 PLLGEEQVRVKDPTAVEAKLRKMVVGGAGKLQVISDFDYTLSRFATEQGKRCPSCFGVFDDNVKRLKPECRAKFVALYHK   88 (298)
T ss_pred             hhhCCcceeecChHHHHHHHHHHhcCCccceeEeecCchhHHHHHHhhcCcCCccccchhhhhhcCCHHHHHHHHHHHhh
Confidence            3445556778888777653 1       234689999999965211         11111111111     112233444


Q ss_pred             HcC----------CCCcHHHHHHH-HHhhcC---CCHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccH
Q 025042          120 AMG----------GSVPFEEALAA-RLSLFK---PSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMI  185 (259)
Q Consensus       120 ~~~----------~~~~~~~~~~~-~~~~~~---~~~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~  185 (259)
                      |..          .++++++.+.. ...++.   .....+.++.++....+|+|..++++.|+++++++.+.|.+....+
T Consensus        89 Y~PIEidP~ltieEKvp~MeeWW~kSH~Lliq~~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdii  168 (298)
T KOG3128|consen   89 YYPIEIDPVLTIEEKVPHMEEWWTKSHELLIQGGFSKNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAGIGDII  168 (298)
T ss_pred             ccCcccCCCCChhhhchHHHHHHhcccceeecCCcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEecchHHHH
Confidence            321          22233322222 222221   2467788888886678999999999999999999999999999999


Q ss_pred             HHHHHHc-CCCC-CcEeecceeecCCCceecccCCCCCcCCCChHH-HHHHHHHHcC----CCeEEEEecCcccHHhhh
Q 025042          186 NPIASVL-GIPP-ENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA-AVQQIRKAHA----YKVLAMIGDGATDLEVSI  257 (259)
Q Consensus       186 ~~i~~~l-gi~~-~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~-~v~~l~~~~g----~~~v~~vGDg~ND~~al~  257 (259)
                      +.+..+- ++-+ .++.++.+.|+++|...|+...-+.  .-+|.. .++.-.+.+.    -..+++-||++.|+.|..
T Consensus       169 Eev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lih--tfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~  245 (298)
T KOG3128|consen  169 EEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIH--TFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMAD  245 (298)
T ss_pred             HHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHH--HHccchHHHHhhhHHHhhccCCceEEEeccccccchhhc
Confidence            8887653 3322 2455666777766665544322110  011221 2222122221    168999999999999874

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.53  E-value=0.00033  Score=52.76  Aligned_cols=45  Identities=16%  Similarity=0.068  Sum_probs=34.3

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCcccc---------------HHHHHHHcCCCCCcE
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHM---------------INPIASVLGIPPENI  199 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---------------~~~i~~~lgi~~~~~  199 (259)
                      .+.+++.+.++.+++.|+.++++||.....               ...++++-+++.+++
T Consensus        24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l   83 (126)
T TIGR01689        24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEI   83 (126)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceE
Confidence            466889999999999999999999976543               345677778874333

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=97.43  E-value=0.00011  Score=61.47  Aligned_cols=37  Identities=16%  Similarity=0.157  Sum_probs=33.3

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ....+|..+++.+++++|+  +++++|||+.||++|++.
T Consensus       155 ~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~  193 (236)
T TIGR02471       155 PLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRG  193 (236)
T ss_pred             eCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcC
Confidence            4457999999999999997  689999999999999975

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=97.40  E-value=0.0031  Score=53.38  Aligned_cols=98  Identities=14%  Similarity=0.128  Sum_probs=67.4

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHH---HHHcCCCCCcEeecceeecCCCceec------------ccCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPI---ASVLGIPPENIFANQLLFKSSGEFLG------------FDANE  219 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i---~~~lgi~~~~~~~~~l~~~~~~~~~g------------~~~~~  219 (259)
                      ..-+++.++++.|++.|+++.-+|..........   ++++|++.+.-    . +..++.+..            +..+-
T Consensus        81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~----~-~~~~~~~~~~~~~~~~~~~~~~~~GI  155 (252)
T PF11019_consen   81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSS----S-FPEDGIISFPVFDSALSRAPSFYDGI  155 (252)
T ss_pred             EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCcccc----c-cccCcceecccccCCCCCCceeecCe
Confidence            4678999999999999999999998776655544   45678863221    1 111221111            11112


Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhh
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSI  257 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~  257 (259)
                      .+..+.+|+..+..+..+.|.  +.++||-|+...+..+.
T Consensus       156 lft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~  195 (252)
T PF11019_consen  156 LFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVE  195 (252)
T ss_pred             EEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence            334567899999999999887  89999999987776553

The function is not known.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.38  E-value=0.00038  Score=57.53  Aligned_cols=36  Identities=14%  Similarity=0.214  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042          160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      ..++|+.++++|++++++||.....+..+.+.++++
T Consensus        21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999999985

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=97.34  E-value=0.00016  Score=57.02  Aligned_cols=86  Identities=14%  Similarity=0.285  Sum_probs=59.0

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ...|||+.++|++|.+. +.++|.|.+.+..++.+++.++... ..|...+.- ++...           ..++  .++.
T Consensus        41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~-~~f~~~l~r-~~~~~-----------~~~~--~~K~  104 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGG-KVISRRLYR-ESCVF-----------TNGK--YVKD  104 (162)
T ss_pred             EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCC-CEEeEEEEc-cccEE-----------eCCC--EEeE
Confidence            46899999999999987 9999999999999999999999751 244433211 11100           0112  2222


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhh
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVS  256 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al  256 (259)
                      +.. .|.  +++++|||+..|..+.
T Consensus       105 L~~-l~~~~~~vIiVDD~~~~~~~~  128 (162)
T TIGR02251       105 LSL-VGKDLSKVIIIDNSPYSYSLQ  128 (162)
T ss_pred             chh-cCCChhhEEEEeCChhhhccC
Confidence            222 243  7899999999987654

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PTZ00174 phosphomannomutase; Provisional

Probab=97.34  E-value=0.00044  Score=58.36  Aligned_cols=38  Identities=18%  Similarity=0.313  Sum_probs=32.5

Q ss_pred             CCCcCCCChHHHHHHHHHHcCCCeEEEEec----CcccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAYKVLAMIGD----GATDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~~~v~~vGD----g~ND~~al~~  258 (259)
                      +....+.+|+.+++.|+++.  +++++|||    +.||++|+++
T Consensus       181 eI~~~gvsKg~al~~L~~~~--~eviafGD~~~~~~NDieMl~~  222 (247)
T PTZ00174        181 DVFPKGWDKTYCLRHLENDF--KEIHFFGDKTFEGGNDYEIYND  222 (247)
T ss_pred             EeeeCCCcHHHHHHHHHhhh--hhEEEEcccCCCCCCcHhhhhc
Confidence            34445678999999999984  89999999    9999999985

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.26  E-value=0.0002  Score=60.24  Aligned_cols=89  Identities=17%  Similarity=0.048  Sum_probs=61.2

Q ss_pred             CccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHH
Q 025042          157 SPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRK  236 (259)
Q Consensus       157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~  236 (259)
                      +++..++++.++++|+++ ++|+............+|..  .++. .+..      .+.   ++...++|+...++...+
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g--~~~~-~i~~------~g~---~~~~~gKP~~~~~~~~~~  206 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG--YYAE-LIKQ------LGG---KVIYSGKPYPAIFHKALK  206 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc--HHHH-HHHH------hCC---cEecCCCCCHHHHHHHHH
Confidence            688899999998889986 77887776665555555543  2222 1100      111   112246788999999999


Q ss_pred             HcCC---CeEEEEecC-cccHHhhhc
Q 025042          237 AHAY---KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       237 ~~g~---~~v~~vGDg-~ND~~al~~  258 (259)
                      ++|.   ++++||||+ .+|+.+++.
T Consensus       207 ~~~~~~~~~~~~vGD~~~~Di~~a~~  232 (242)
T TIGR01459       207 ECSNIPKNRMLMVGDSFYTDILGANR  232 (242)
T ss_pred             HcCCCCcccEEEECCCcHHHHHHHHH
Confidence            8875   479999999 599998764

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PLN02382 probable sucrose-phosphatase

Probab=97.21  E-value=0.00026  Score=64.20  Aligned_cols=38  Identities=21%  Similarity=0.221  Sum_probs=33.6

Q ss_pred             CcCCCChHHHHHHHHHHc---CC--CeEEEEecCcccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAH---AY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~---g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .....+|..+++.+++++   |+  +++++||||.||++|++.
T Consensus       170 ~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~  212 (413)
T PLN02382        170 LPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSV  212 (413)
T ss_pred             EeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhc
Confidence            345678999999999998   76  799999999999999975

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=97.18  E-value=0.0003  Score=59.55  Aligned_cols=38  Identities=16%  Similarity=0.228  Sum_probs=32.9

Q ss_pred             cCCCChHHHHHHHHHHcCC----CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY----KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~----~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+|..+++.+++.+|+    +++++||||.||++|++.+
T Consensus       172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~a  213 (256)
T TIGR01486       172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVV  213 (256)
T ss_pred             cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHC
Confidence            3467899999999999874    5799999999999999864

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=97.12  E-value=0.001  Score=56.40  Aligned_cols=37  Identities=14%  Similarity=0.162  Sum_probs=33.6

Q ss_pred             cHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042          159 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      ...+.++.++++|++++++||.....+..+++++|++
T Consensus        20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~   56 (256)
T TIGR01486        20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE   56 (256)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999985

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.09  E-value=0.0017  Score=57.08  Aligned_cols=40  Identities=20%  Similarity=0.355  Sum_probs=30.6

Q ss_pred             CCccHHHHHHHHHHC----CCcEEEEeCCcccc----HHHHHHHcCCC
Q 025042          156 LSPGIDELVKKLKAN----NKNVYLISGGFRHM----INPIASVLGIP  195 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~----g~~v~ivTg~~~~~----~~~i~~~lgi~  195 (259)
                      +.|++.++++.|+.+    |+++.++|+.....    ++.+.+++|++
T Consensus        17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~   64 (321)
T TIGR01456        17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD   64 (321)
T ss_pred             ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence            358999999999988    99999999875333    44445778874

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PTZ00445 p36-lilke protein; Provisional

Probab=96.95  E-value=0.0065  Score=49.53  Aligned_cols=100  Identities=10%  Similarity=0.135  Sum_probs=59.7

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCcccc---------------HHHHHHHcCCC--CCcEeeccee-ecCCCceeccc
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHM---------------INPIASVLGIP--PENIFANQLL-FKSSGEFLGFD  216 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---------------~~~i~~~lgi~--~~~~~~~~l~-~~~~~~~~g~~  216 (259)
                      .++|+...+++.|++.|+++.++|=+.+..               ++..++.-+-+  .+.+|+-... +++...|.   
T Consensus        75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~---  151 (219)
T PTZ00445         75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYR---  151 (219)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhh---
Confidence            467999999999999999999999654433               34444432221  0122221110 00000000   


Q ss_pred             CCCCCcCCCChH--HHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          217 ANEPTSRSGGKA--AAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       217 ~~~~~~~~~~K~--~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                       ..-...|.++.  -=++++++++|+  ++++||-|....+.+++.
T Consensus       152 -~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~  196 (219)
T PTZ00445        152 -PLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALK  196 (219)
T ss_pred             -hhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHH
Confidence             00112233333  344999999998  899999999998888764

>PTZ00174 phosphomannomutase; Provisional

Probab=96.93  E-value=0.00069  Score=57.16  Aligned_cols=17  Identities=29%  Similarity=0.417  Sum_probs=14.4

Q ss_pred             CcCEEEEeCCCcccccc
Q 025042           82 TADAVCFDVDSTVCVDE   98 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~   98 (259)
                      .+|+|+||+||||.+++
T Consensus         4 ~~klia~DlDGTLL~~~   20 (247)
T PTZ00174          4 KKTILLFDVDGTLTKPR   20 (247)
T ss_pred             CCeEEEEECcCCCcCCC
Confidence            47899999999998653

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=96.88  E-value=0.0056  Score=51.27  Aligned_cols=40  Identities=25%  Similarity=0.445  Sum_probs=29.2

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHH----HHHHcCCC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINP----IASVLGIP  195 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~----i~~~lgi~  195 (259)
                      +.|++.++++.++++|+++.++|++.......    +.+.+|++
T Consensus        15 ~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~   58 (236)
T TIGR01460        15 PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD   58 (236)
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence            45799999999999999999999765444433    33336663

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=96.85  E-value=0.013  Score=50.04  Aligned_cols=66  Identities=23%  Similarity=0.349  Sum_probs=53.3

Q ss_pred             HHHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCC
Q 025042           74 KEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRP  153 (259)
Q Consensus        74 ~~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  153 (259)
                      ....|.+..+++++||.||.|..++                                                       
T Consensus        13 ~~~~e~l~~~DtfifDcDGVlW~g~-------------------------------------------------------   37 (306)
T KOG2882|consen   13 EEARELLDSFDTFIFDCDGVLWLGE-------------------------------------------------------   37 (306)
T ss_pred             HHHHHHHhhcCEEEEcCCcceeecC-------------------------------------------------------
Confidence            4566788999999999999995533                                                       


Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHH---HcCCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIAS---VLGIP  195 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~---~lgi~  195 (259)
                       .+.||+.++++.|++.|..+.++|+......+..++   ++|+.
T Consensus        38 -~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~   81 (306)
T KOG2882|consen   38 -KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN   81 (306)
T ss_pred             -CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence             356999999999999998899999987777665544   56764

>TIGR00685 T6PP trehalose-phosphatase

Probab=96.71  E-value=0.0012  Score=55.65  Aligned_cols=37  Identities=19%  Similarity=0.115  Sum_probs=32.9

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..+.+|..+++.++++++.  +.++|+||+.||.+|++.
T Consensus       163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~  201 (244)
T TIGR00685       163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRV  201 (244)
T ss_pred             eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHH
Confidence            4467899999999999886  689999999999999975

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=96.52  E-value=0.0034  Score=42.62  Aligned_cols=35  Identities=23%  Similarity=0.263  Sum_probs=31.5

Q ss_pred             CCChHHHHHHHHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          224 SGGKAAAVQQIRKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      ++|....++...+++++  ++++||||+ .+|+.+++.
T Consensus         3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~   40 (75)
T PF13242_consen    3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKA   40 (75)
T ss_dssp             STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHH
T ss_pred             CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHH
Confidence            47889999999999988  899999999 999999875

...

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=96.50  E-value=0.023  Score=48.36  Aligned_cols=41  Identities=22%  Similarity=0.253  Sum_probs=32.3

Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +.......|+.+++.+.++.+.  +-+++.||..+|-.|++++
T Consensus       175 Evrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v  217 (266)
T COG1877         175 ELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAV  217 (266)
T ss_pred             EEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhh
Confidence            3334456799999999998775  3589999999999888764

>PLN02423 phosphomannomutase

Probab=96.50  E-value=0.0019  Score=54.47  Aligned_cols=39  Identities=18%  Similarity=0.262  Sum_probs=32.6

Q ss_pred             CCCCCcCCCChHHHHHHHHHHcCCCeEEEEec----CcccHHhhhc
Q 025042          217 ANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGD----GATDLEVSIF  258 (259)
Q Consensus       217 ~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGD----g~ND~~al~~  258 (259)
                      +.+.+..+.+|+.+++.|+ .  .++|++|||    +.||++|++.
T Consensus       180 ~iDi~~~gvnKg~al~~L~-~--~~e~~aFGD~~~~~~ND~eMl~~  222 (245)
T PLN02423        180 SFDVFPQGWDKTYCLQFLE-D--FDEIHFFGDKTYEGGNDHEIFES  222 (245)
T ss_pred             EEEEeeCCCCHHHHHHHhc-C--cCeEEEEeccCCCCCCcHHHHhC
Confidence            4455566789999999999 3  289999999    8999999984

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=96.43  E-value=0.007  Score=47.39  Aligned_cols=48  Identities=19%  Similarity=0.298  Sum_probs=40.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecc
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQ  203 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~  203 (259)
                      ..+|||+.++|+++++. ++++++|++.+..+..+++.++... .+|...
T Consensus        57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~-~~F~~r  104 (156)
T TIGR02250        57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG-KYFGDR  104 (156)
T ss_pred             EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC-CeeccE
Confidence            46899999999999965 9999999999999999999998751 255443

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=96.33  E-value=0.013  Score=47.32  Aligned_cols=31  Identities=23%  Similarity=0.297  Sum_probs=22.1

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccc
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRH  183 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~  183 (259)
                      ...+.||+.+++++|.+.|...+++|+....
T Consensus        71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~  101 (191)
T PF06941_consen   71 NLPPIPGAVEALKKLRDKGHEIVIITARPPE  101 (191)
T ss_dssp             T--B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred             CCCccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence            3578899999999999999887777765443

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PLN02423 phosphomannomutase

Probab=96.30  E-value=0.011  Score=49.88  Aligned_cols=24  Identities=25%  Similarity=0.397  Sum_probs=17.8

Q ss_pred             CccHHHHHHHHHHCCCcEEEEeCCc
Q 025042          157 SPGIDELVKKLKANNKNVYLISGGF  181 (259)
Q Consensus       157 ~p~~~e~l~~Lk~~g~~v~ivTg~~  181 (259)
                      .|...+.+++|+++ +++++.||..
T Consensus        26 ~~~~~~ai~~l~~~-i~fviaTGR~   49 (245)
T PLN02423         26 TPEMLEFMKELRKV-VTVGVVGGSD   49 (245)
T ss_pred             CHHHHHHHHHHHhC-CEEEEECCcC
Confidence            35667788888866 8888888863

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=96.22  E-value=0.0052  Score=47.99  Aligned_cols=40  Identities=23%  Similarity=0.460  Sum_probs=32.9

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI  194 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi  194 (259)
                      ..+||++.++|+++.+. +.++|.|.+.+..++.+.+.++-
T Consensus        35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp   74 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDP   74 (159)
T ss_dssp             EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTT
T ss_pred             EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhh
Confidence            46799999999999654 89999999999999999999885

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=95.59  E-value=0.034  Score=52.14  Aligned_cols=130  Identities=15%  Similarity=0.193  Sum_probs=69.1

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHH
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID  161 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~  161 (259)
                      +-+.|+.|+|||+|..+++-.+.-.++..+.                                            ..|++
T Consensus       529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWT--------------------------------------------h~GVA  564 (738)
T KOG2116|consen  529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWT--------------------------------------------HTGVA  564 (738)
T ss_pred             CCcEEEecCCCceEhhhhhhhhhhhhcCcch--------------------------------------------hhhHH
Confidence            4578999999999998876555555553221                                            13677


Q ss_pred             HHHHHHHHCCCcEEEEeCC---ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCC-ChHHHHHHHHHH
Q 025042          162 ELVKKLKANNKNVYLISGG---FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG-GKAAAVQQIRKA  237 (259)
Q Consensus       162 e~l~~Lk~~g~~v~ivTg~---~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~-~K~~~v~~l~~~  237 (259)
                      .+....+++|+++..+|..   .....+..++.+.-+.-..=..-+..-.++.+....-.-+.-.|+ =|..++..++..
T Consensus       565 kLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DIk~L  644 (738)
T KOG2116|consen  565 KLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDIKNL  644 (738)
T ss_pred             HHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHHHHh
Confidence            7777777788887777753   222223333322211000000000000111111110000111233 489999999988


Q ss_pred             cCC---CeEEEEecCcccHHh
Q 025042          238 HAY---KVLAMIGDGATDLEV  255 (259)
Q Consensus       238 ~g~---~~v~~vGDg~ND~~a  255 (259)
                      +.-   .=.+-||.-.+|.-.
T Consensus       645 F~p~~nPFYAgFGNR~TDviS  665 (738)
T KOG2116|consen  645 FPPSGNPFYAGFGNRITDVIS  665 (738)
T ss_pred             cCCCCCceeeecCCCccccee
Confidence            763   346778888888644

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=95.51  E-value=0.0023  Score=64.94  Aligned_cols=61  Identities=8%  Similarity=-0.014  Sum_probs=43.2

Q ss_pred             eeeeeeeccCccchhhhccCcccc------ccccc----CCCCCCCHHHHHhccCcCEEEEeCCCcccccc
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEA------SALGR----SENTLPSKEVLQLWRTADAVCFDVDSTVCVDE   98 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~------~~~~~----~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~   98 (259)
                      +.+....+|+++++....+-...+      .+..+    +++++|+-...|.++.++.||+|||||||.+.
T Consensus       304 ~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~  374 (1057)
T TIGR01652       304 LILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNI  374 (1057)
T ss_pred             HHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeee
Confidence            344556789988874433311111      22222    46889999999999999999999999998764

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=95.35  E-value=0.048  Score=48.89  Aligned_cols=28  Identities=18%  Similarity=0.400  Sum_probs=21.8

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcC
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGA  109 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~  109 (259)
                      ..+.|+||+|||||..+.+-.+...++.
T Consensus       374 n~kiVVsDiDGTITkSD~~Ghv~~miGk  401 (580)
T COG5083         374 NKKIVVSDIDGTITKSDALGHVKQMIGK  401 (580)
T ss_pred             CCcEEEEecCCcEEehhhHHHHHHHhcc
Confidence            5789999999999998876555555553

>PLN02645 phosphoglycolate phosphatase

Probab=94.83  E-value=0.023  Score=49.59  Aligned_cols=36  Identities=14%  Similarity=0.165  Sum_probs=31.3

Q ss_pred             CCCChHHHHHHHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          223 RSGGKAAAVQQIRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      .++++...++...++++.  ++++||||+. +|+.+++.
T Consensus       228 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~  266 (311)
T PLN02645        228 VGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQN  266 (311)
T ss_pred             CCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHH
Confidence            358899999999998887  7999999997 99998764

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=94.75  E-value=0.058  Score=43.78  Aligned_cols=40  Identities=15%  Similarity=0.202  Sum_probs=35.9

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      ..||+..+||+.+.+ .+.++|-|......++.++..+|+.
T Consensus        45 ~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~~~   84 (195)
T TIGR02245        45 LMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELGVL   84 (195)
T ss_pred             EeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhccc
Confidence            468999999999987 5899999999999999999998863

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=94.64  E-value=0.094  Score=44.65  Aligned_cols=46  Identities=20%  Similarity=0.249  Sum_probs=37.3

Q ss_pred             CccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecce
Q 025042          157 SPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQL  204 (259)
Q Consensus       157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l  204 (259)
                      .|.+.+-+..||+.|..+++=|-|.++.+..-+++++++  .+|...+
T Consensus       144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~--~~Fd~ii  189 (297)
T PF05152_consen  144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLE--GYFDIII  189 (297)
T ss_pred             ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCc--cccEEEE
Confidence            367778888999999888888988899999999999987  5565433

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=94.63  E-value=0.073  Score=42.14  Aligned_cols=85  Identities=16%  Similarity=0.218  Sum_probs=52.2

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHH----HHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINP----IASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA  230 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~----i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~  230 (259)
                      .+.+-++++|+...++|-.++.+||..+...+.    +++.+.++  +....  .      +.|...   ...--.|.  
T Consensus       114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~--~m~pv--~------f~Gdk~---k~~qy~Kt--  178 (237)
T COG3700         114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT--NMNPV--I------FAGDKP---KPGQYTKT--  178 (237)
T ss_pred             chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC--CCcce--e------eccCCC---Cccccccc--
Confidence            466788999999999999999999986655543    44455554  21111  1      111111   00111233  


Q ss_pred             HHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          231 VQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       231 v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                       ..++++   ..-+++|||.||+-|++-
T Consensus       179 -~~i~~~---~~~IhYGDSD~Di~AAke  202 (237)
T COG3700         179 -QWIQDK---NIRIHYGDSDNDITAAKE  202 (237)
T ss_pred             -HHHHhc---CceEEecCCchhhhHHHh
Confidence             333343   467899999999999874

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=94.46  E-value=0.029  Score=46.81  Aligned_cols=32  Identities=13%  Similarity=0.155  Sum_probs=22.3

Q ss_pred             HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042          163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      .++ ++++|+.++++||.....+..++..+++.
T Consensus        23 ~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~   54 (236)
T TIGR02471        23 LLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP   54 (236)
T ss_pred             HHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence            444 46667777777777777777777777663

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=94.21  E-value=0.23  Score=40.42  Aligned_cols=29  Identities=21%  Similarity=0.184  Sum_probs=23.7

Q ss_pred             CCChHHHHHHHHHHcCC--CeEEEEecCccc
Q 025042          224 SGGKAAAVQQIRKAHAY--KVLAMIGDGATD  252 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND  252 (259)
                      +++.....+.-++..|+  ++++||||..||
T Consensus       180 GKP~~~fFe~al~~~gv~p~~aVMIGDD~~d  210 (262)
T KOG3040|consen  180 GKPSPFFFESALQALGVDPEEAVMIGDDLND  210 (262)
T ss_pred             cCCCHHHHHHHHHhcCCChHHheEEcccccc
Confidence            56667788887777787  899999999995

>PLN02580 trehalose-phosphatase

Probab=94.18  E-value=0.045  Score=49.03  Aligned_cols=35  Identities=23%  Similarity=0.143  Sum_probs=30.2

Q ss_pred             CCChHHHHHHHHHHcCC--C-e--EEEEecCcccHHhhhc
Q 025042          224 SGGKAAAVQQIRKAHAY--K-V--LAMIGDGATDLEVSIF  258 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~--~-~--v~~vGDg~ND~~al~~  258 (259)
                      ..+|+.+++.+++++|+  . .  .++|||+.||.+|++.
T Consensus       299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~  338 (384)
T PLN02580        299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKV  338 (384)
T ss_pred             CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHh
Confidence            46899999999999987  2 2  4899999999999985

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.15  E-value=0.42  Score=36.95  Aligned_cols=35  Identities=23%  Similarity=0.210  Sum_probs=22.0

Q ss_pred             CCCChHHHHHHHHHHcCC---CeEEEEecCc-ccHHhhh
Q 025042          223 RSGGKAAAVQQIRKAHAY---KVLAMIGDGA-TDLEVSI  257 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~---~~v~~vGDg~-ND~~al~  257 (259)
                      .|..-.+.+..+-..-.+   .+++||||-. +|+-++.
T Consensus       119 KP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN  157 (190)
T KOG2961|consen  119 KPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYAN  157 (190)
T ss_pred             CCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhh
Confidence            355666666665442222   7999999964 4776553

>PLN03017 trehalose-phosphatase

Probab=94.09  E-value=0.13  Score=45.87  Aligned_cols=34  Identities=21%  Similarity=0.237  Sum_probs=29.5

Q ss_pred             CChHHHHHHHHHHcCC-----CeEEEEecCcccHHhhhc
Q 025042          225 GGKAAAVQQIRKAHAY-----KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       225 ~~K~~~v~~l~~~~g~-----~~v~~vGDg~ND~~al~~  258 (259)
                      -+|+.+++.+++.+|+     .-.+|+||..+|-.|++.
T Consensus       282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~  320 (366)
T PLN03017        282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKM  320 (366)
T ss_pred             CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHH
Confidence            4899999999998875     258999999999999875

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=94.06  E-value=0.3  Score=41.40  Aligned_cols=40  Identities=23%  Similarity=0.347  Sum_probs=33.3

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCcccc---HHHHHHHcCCC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHM---INPIASVLGIP  195 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~lgi~  195 (259)
                      +.|++.++++.|+++|++++++||.....   ....++.+|++
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~   64 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD   64 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence            67899999999999999999999987776   44456667875

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=94.02  E-value=0.3  Score=41.88  Aligned_cols=41  Identities=22%  Similarity=0.349  Sum_probs=32.1

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHH---HHHHcCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINP---IASVLGIP  195 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~---i~~~lgi~  195 (259)
                      .+.|++.++|++|+++|++++++||+.......   .++.+|++
T Consensus        18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~   61 (279)
T TIGR01452        18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN   61 (279)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence            467899999999999999999999975444333   45668875

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK10444 UMP phosphatase; Provisional

Probab=93.90  E-value=0.37  Score=40.68  Aligned_cols=41  Identities=15%  Similarity=0.226  Sum_probs=34.2

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH---cCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV---LGIP  195 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~---lgi~  195 (259)
                      .+.|++.++++.|+++|.+++++||........+.++   +|++
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~   60 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD   60 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence            3579999999999999999999999988777666554   6773

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=93.72  E-value=0.052  Score=53.74  Aligned_cols=43  Identities=16%  Similarity=0.205  Sum_probs=33.5

Q ss_pred             CCCCCcCCCChHHHHHHHHHH---cCC--CeEEEEecCcccHHhhhcC
Q 025042          217 ANEPTSRSGGKAAAVQQIRKA---HAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       217 ~~~~~~~~~~K~~~v~~l~~~---~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+......+|+.+++.++++   .|.  +.+++|||+.||.+|++.+
T Consensus       753 vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~  800 (854)
T PLN02205        753 IVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI  800 (854)
T ss_pred             EEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence            334445567899999999754   454  6899999999999999853

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=93.65  E-value=0.21  Score=45.67  Aligned_cols=82  Identities=15%  Similarity=0.128  Sum_probs=54.7

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR  235 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~  235 (259)
                      .+....+++..|++.|+-+.++|-+....+..+.++--   +.+....            +.....+.-.+|++-+++++
T Consensus       256 ~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp---~MiLkee------------dfa~~~iNW~~K~eNirkIA  320 (574)
T COG3882         256 AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP---DMILKEE------------DFAVFQINWDPKAENIRKIA  320 (574)
T ss_pred             hHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC---CeEeeHh------------hhhhheecCCcchhhHHHHH
Confidence            34466778999999999999999777776666554321   0111110            11111234568999999999


Q ss_pred             HHcCC--CeEEEEecCccc
Q 025042          236 KAHAY--KVLAMIGDGATD  252 (259)
Q Consensus       236 ~~~g~--~~v~~vGDg~ND  252 (259)
                      +++++  +..+|+-|+.-.
T Consensus       321 kklNlg~dSmvFiDD~p~E  339 (574)
T COG3882         321 KKLNLGLDSMVFIDDNPAE  339 (574)
T ss_pred             HHhCCCccceEEecCCHHH
Confidence            99988  788888887643

>PLN02151 trehalose-phosphatase

Probab=93.18  E-value=0.2  Score=44.36  Aligned_cols=34  Identities=24%  Similarity=0.238  Sum_probs=29.1

Q ss_pred             CChHHHHHHHHHHcCC--C---eEEEEecCcccHHhhhc
Q 025042          225 GGKAAAVQQIRKAHAY--K---VLAMIGDGATDLEVSIF  258 (259)
Q Consensus       225 ~~K~~~v~~l~~~~g~--~---~v~~vGDg~ND~~al~~  258 (259)
                      -+|+.+++.+++.+++  .   -++|+||-.+|-.|++.
T Consensus       268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~  306 (354)
T PLN02151        268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKI  306 (354)
T ss_pred             CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHH
Confidence            4899999999998775  1   38999999999999875

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=92.63  E-value=0.34  Score=38.05  Aligned_cols=30  Identities=13%  Similarity=0.229  Sum_probs=20.5

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI  185 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~  185 (259)
                      .+..++...|..++++ .+++.+|.......
T Consensus        72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~  101 (194)
T COG5663          72 LLAQLVKQVLPSLKEE-HRLIYITARKADLT  101 (194)
T ss_pred             HHHHHHHHHhHHHHhh-ceeeeeehhhHHHH
Confidence            4567888899888876 46677776544443

>PLN02580 trehalose-phosphatase

Probab=91.96  E-value=0.37  Score=43.30  Aligned_cols=39  Identities=18%  Similarity=0.232  Sum_probs=30.6

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI  194 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi  194 (259)
                      .+.|++.+.|+.|.+. ..++|+||.....++.+..-.++
T Consensus       141 ~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~~~l  179 (384)
T PLN02580        141 LMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGLTEL  179 (384)
T ss_pred             cCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCCCCc
Confidence            4568999999999877 47999999988888777654443

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=90.71  E-value=1.1  Score=37.74  Aligned_cols=40  Identities=18%  Similarity=0.339  Sum_probs=36.1

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      +.|...+.|++++++|+++++.||.....+..++++++++
T Consensus        21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (272)
T PRK10530         21 ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD   60 (272)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence            4567889999999999999999999999899999999885

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=90.60  E-value=0.49  Score=47.03  Aligned_cols=37  Identities=19%  Similarity=0.236  Sum_probs=29.8

Q ss_pred             CCccHHHHHHHH-HHCCCcEEEEeCCccccHHHHHHHc
Q 025042          156 LSPGIDELVKKL-KANNKNVYLISGGFRHMINPIASVL  192 (259)
Q Consensus       156 ~~p~~~e~l~~L-k~~g~~v~ivTg~~~~~~~~i~~~l  192 (259)
                      +.|+..++|+.| ++.|..++++||......+.+....
T Consensus       617 p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~  654 (854)
T PLN02205        617 PSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC  654 (854)
T ss_pred             CCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence            457888899987 6778889999999888888777543

>PLN03190 aminophospholipid translocase; Provisional

Probab=89.96  E-value=0.15  Score=52.44  Aligned_cols=31  Identities=10%  Similarity=-0.031  Sum_probs=27.7

Q ss_pred             CCCCCCHHHHHhccCcCEEEEeCCCcccccc
Q 025042           68 ENTLPSKEVLQLWRTADAVCFDVDSTVCVDE   98 (259)
Q Consensus        68 g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~   98 (259)
                      +..+|+-...|.|+.++.|+.|||||||.+.
T Consensus       438 ~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~  468 (1178)
T PLN03190        438 RFQCRALNINEDLGQIKYVFSDKTGTLTENK  468 (1178)
T ss_pred             cceeccCcchhhhccceEEEEcCCCccccce
Confidence            4568888899999999999999999998874

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=89.23  E-value=0.38  Score=40.15  Aligned_cols=36  Identities=17%  Similarity=0.049  Sum_probs=30.0

Q ss_pred             CCCChHHHHHHHHHHcCC--CeE-EEEecCc-ccHHhhhc
Q 025042          223 RSGGKAAAVQQIRKAHAY--KVL-AMIGDGA-TDLEVSIF  258 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~--~~v-~~vGDg~-ND~~al~~  258 (259)
                      .++++...++.+.++++.  .++ +||||+. +|+.+++.
T Consensus       186 ~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~  225 (236)
T TIGR01460       186 VGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKN  225 (236)
T ss_pred             ecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHH
Confidence            457899999999998886  455 9999998 89998764

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=89.22  E-value=1.1  Score=41.15  Aligned_cols=37  Identities=22%  Similarity=0.405  Sum_probs=29.5

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL  192 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l  192 (259)
                      ..|....+|+.||++|.++.++|++.-..+..+++.+
T Consensus       184 k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl  220 (448)
T PF05761_consen  184 KDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYL  220 (448)
T ss_dssp             --CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhc
Confidence            3578999999999999999999999999999988864

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=88.43  E-value=2.3  Score=37.05  Aligned_cols=40  Identities=18%  Similarity=0.316  Sum_probs=28.8

Q ss_pred             CCccHHHHHHHHHHC----CCcEEEEeCCccc----cHHHHHHHcCCC
Q 025042          156 LSPGIDELVKKLKAN----NKNVYLISGGFRH----MINPIASVLGIP  195 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~----g~~v~ivTg~~~~----~~~~i~~~lgi~  195 (259)
                      +.|++.+.++.|.++    .++.+++|++...    -++.+.+.||+.
T Consensus        52 ~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~   99 (389)
T KOG1618|consen   52 PIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVE   99 (389)
T ss_pred             CCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCc
Confidence            457888889888776    6889999986333    345566678873

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=87.61  E-value=0.31  Score=40.63  Aligned_cols=37  Identities=22%  Similarity=0.306  Sum_probs=27.9

Q ss_pred             CCCChHHHHHHHHHHcCC-----CeEEEEecCcccHHhhhcC
Q 025042          223 RSGGKAAAVQQIRKAHAY-----KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~-----~~v~~vGDg~ND~~al~~v  259 (259)
                      ...+|+.+++.++++++.     +-++|+||..+|-.|++++
T Consensus       162 ~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~  203 (235)
T PF02358_consen  162 PGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRAL  203 (235)
T ss_dssp             TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTT
T ss_pred             CCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHH
Confidence            345699999999999863     3699999999999999864

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=87.30  E-value=2.1  Score=37.00  Aligned_cols=41  Identities=24%  Similarity=0.506  Sum_probs=33.9

Q ss_pred             hCCCCCCccHHHHHHHHHHCC-CcEEEEeCCccccHHHHHHHcCC
Q 025042          151 KRPPRLSPGIDELVKKLKANN-KNVYLISGGFRHMINPIASVLGI  194 (259)
Q Consensus       151 ~~~~~~~p~~~e~l~~Lk~~g-~~v~ivTg~~~~~~~~i~~~lgi  194 (259)
                      ...++++|...++++.+++.| ++++++|++..   ..+.+.+..
T Consensus        88 ~GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~L~~  129 (296)
T COG0731          88 SGEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEELKL  129 (296)
T ss_pred             CCCcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHHhcc
Confidence            346899999999999999999 68999999877   555666653

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=85.40  E-value=1.3  Score=36.90  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=21.4

Q ss_pred             CCCccHHHHHHHHHHCC-CcEEEEeCCccccHHHHHH
Q 025042          155 RLSPGIDELVKKLKANN-KNVYLISGGFRHMINPIAS  190 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g-~~v~ivTg~~~~~~~~i~~  190 (259)
                      .+.+++.++|+.|.+.. ..++|+||......+.+..
T Consensus        19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~   55 (235)
T PF02358_consen   19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGG   55 (235)
T ss_dssp             ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S
T ss_pred             CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcC
Confidence            45688999999997664 3599999987766444433

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>PLN02382 probable sucrose-phosphatase

Probab=85.35  E-value=1.5  Score=39.88  Aligned_cols=13  Identities=23%  Similarity=0.314  Sum_probs=11.1

Q ss_pred             EEEEeCCCccccc
Q 025042           85 AVCFDVDSTVCVD   97 (259)
Q Consensus        85 ~vvFD~DGTLt~~   97 (259)
                      +|+.|+||||++.
T Consensus        11 lI~sDLDGTLL~~   23 (413)
T PLN02382         11 MIVSDLDHTMVDH   23 (413)
T ss_pred             EEEEcCCCcCcCC
Confidence            6788999999875

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=82.40  E-value=6.2  Score=40.12  Aligned_cols=34  Identities=12%  Similarity=0.184  Sum_probs=28.6

Q ss_pred             CCCChHHHHHHHHHHcCC--CeE-EEEecCcc-cHHhh
Q 025042          223 RSGGKAAAVQQIRKAHAY--KVL-AMIGDGAT-DLEVS  256 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~--~~v-~~vGDg~N-D~~al  256 (259)
                      ...+|..+|+.|..++|+  +++ +++||+-| |.+.+
T Consensus       953 ~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~L  990 (1050)
T TIGR02468       953 LLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGL  990 (1050)
T ss_pred             CCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHH
Confidence            357899999999999999  555 67999999 97754

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=81.91  E-value=2.7  Score=42.26  Aligned_cols=78  Identities=14%  Similarity=0.221  Sum_probs=0.0

Q ss_pred             cCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccH
Q 025042           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGI  160 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~  160 (259)
                      ++-.+++||+||||+.                                         +...++..-..+......+.|++
T Consensus       589 a~~RLlfLDyDGTLap-----------------------------------------~~~~P~~~~~~~~~~~a~p~p~l  627 (934)
T PLN03064        589 SNNRLLILGFNATLTE-----------------------------------------PVDTPGRRGDQIKEMELRLHPEL  627 (934)
T ss_pred             ccceEEEEecCceecc-----------------------------------------CCCCcccccccccccccCCCHHH


Q ss_pred             HHHHHHHHHC-CCcEEEEeCCccccHHHHHHHcCCCCCcEeec
Q 025042          161 DELVKKLKAN-NKNVYLISGGFRHMINPIASVLGIPPENIFAN  202 (259)
Q Consensus       161 ~e~l~~Lk~~-g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~  202 (259)
                      .++|+.|.+. +..++|+||......+.++..+++   .+.++
T Consensus       628 ~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L---~LaAE  667 (934)
T PLN03064        628 KEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM---WLAAE  667 (934)
T ss_pred             HHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc---eEEee

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=80.97  E-value=7  Score=32.10  Aligned_cols=40  Identities=20%  Similarity=0.342  Sum_probs=31.6

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHH---HHcCCC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIA---SVLGIP  195 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~---~~lgi~  195 (259)
                      ..|++.+.++.|+..+.++-.+|+...+.-+.+.   .++|++
T Consensus        24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~   66 (262)
T KOG3040|consen   24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD   66 (262)
T ss_pred             cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence            3489999999999999999999998776655554   456764

>PLN02151 trehalose-phosphatase

Probab=80.85  E-value=1.6  Score=38.74  Aligned_cols=13  Identities=23%  Similarity=0.309  Sum_probs=10.9

Q ss_pred             cCEEEEeCCCccc
Q 025042           83 ADAVCFDVDSTVC   95 (259)
Q Consensus        83 ~k~vvFD~DGTLt   95 (259)
                      --+++||+||||+
T Consensus        98 ~~ll~lDyDGTL~  110 (354)
T PLN02151         98 QIVMFLDYDGTLS  110 (354)
T ss_pred             ceEEEEecCccCC
Confidence            3578889999997

>PLN03017 trehalose-phosphatase

Probab=80.18  E-value=1.9  Score=38.53  Aligned_cols=13  Identities=23%  Similarity=0.309  Sum_probs=10.8

Q ss_pred             cCEEEEeCCCccc
Q 025042           83 ADAVCFDVDSTVC   95 (259)
Q Consensus        83 ~k~vvFD~DGTLt   95 (259)
                      --++++|+||||+
T Consensus       111 ~~llflD~DGTL~  123 (366)
T PLN03017        111 QIVMFLDYDGTLS  123 (366)
T ss_pred             CeEEEEecCCcCc
Confidence            3568889999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	259
1nnl_A	225	Crystal Structure Of Human Phosphoserine Phosphatas		4e-49
1l8l_A	225	Molecular Basis For The Local Confomational Rearran		6e-49
1f5s_A	211	Crystal Structure Of Phosphoserine Phosphatase From		7e-13
3kd3_A	219	Crystal Structure Of A Phosphoserine Phosphohydrola		4e-12
1l7m_A	211	High Resolution Liganded Structure Of Phosphoserine		5e-12
1j97_A	211	Phospho-Aspartyl Intermediate Analogue Of Phosphose		6e-12
1l7o_A	211	Crystal Structure Of Phosphoserine Phosphatase In A		2e-11
3n28_A	335	Crystal Structure Of Probable Phosphoserine Phospha		9e-09
3p96_A	415	Crystal Structure Of Phosphoserine Phosphatase Serb		1e-07
4eze_A	317	Crystal Structure Of Had Family Hydrolase T0658 Fro		3e-05
3m1y_A	217	Crystal Structure Of A Phosphoserine Phosphatase (S		7e-04

>pdb|1NNL|A Chain A, Crystal Structure Of Human Phosphoserine Phosphatase Length = 225

Iteration: 1
 Score =  191 bits (484), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 124/180 (68%)
Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct: 6   ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65
Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGI 194
           L+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR ++  +AS L I
Sbjct: 66  LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125
Query: 195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
           P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct: 126 PATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDME 185

>pdb|1L8L|A Chain A, Molecular Basis For The Local Confomational Rearrangement Of Human Phosphoserine Phosphatase Length = 225

Iteration: 1
 Score =  190 bits (483), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 124/180 (68%)
Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct: 6   ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65
Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGI 194
           L+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR ++  +AS L I
Sbjct: 66  LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125
Query: 195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
           P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct: 126 PATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKFLKEKFHFKKIIMIGDGATDME 185

>pdb|1F5S|A Chain A, Crystal Structure Of Phosphoserine Phosphatase From Methanococcus Jannaschii Length = 211

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
           + FD DST+  +E IDE+A   G  + V + T  AM G + FE++L  R+SL K   + +
Sbjct: 8   ILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEK 67
Query: 145 VQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQL 204
           V+  +++  P  + G +E             ++SGGF   +N I   LG+  +  FAN+L
Sbjct: 68  VEKAIKRITP--TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRL 123
Query: 205 LFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKV--LAMIGDGATDLEVSIF 258
           + K  G+  G D      +   K   +++I K     +     +GDGA D  +S+F
Sbjct: 124 IVK-DGKLTG-DVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAND--ISMF 175

>pdb|3KD3|A Chain A, Crystal Structure Of A Phosphoserine Phosphohydrolase-Like Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 219

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 9/176 (5%)
Query: 86  VCFDVDSTVCVDEGIDELAEFC-----GAGKAVAEWTARAMGGSVPFEEALAARLSLFKP 140
           + FD DST+   E ++ + E          K +   T     G + F ++L  RL++  P
Sbjct: 7   IIFDFDSTLIKKESLELILEPILQKSPAKLKEIEYITNLGXQGDISFRDSLQKRLAIASP 66
Query: 141 SLSQVQDFLEKRPPRL-SPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENI 199
           +   +++F  K  P L + GI E            ++ SGG    I P A  L IP ENI
Sbjct: 67  TKQSIKEFSNKYCPNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENI 126
Query: 200 FANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEV 255
           FA + ++ S G F   D +     S  K +A  + +     +V+A IGDG TD ++
Sbjct: 127 FAVETIWNSDGSFKELDNSNGACDS--KLSAFDKAKGLIDGEVIA-IGDGYTDYQL 179

>pdb|1L7M|A Chain A, High Resolution Liganded Structure Of Phosphoserine Phosphatase (Pi Complex) Length = 211

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
           + FD DST+  +E IDE+A   G  + V + T  A  G + FE++L  R+SL K   + +
Sbjct: 8   ILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAXEGKLNFEQSLRKRVSLLKDLPIEK 67
Query: 145 VQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQL 204
           V+  +++  P  + G +E             ++SGGF   +N I   LG+  +  FAN+L
Sbjct: 68  VEKAIKRITP--TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRL 123
Query: 205 LFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKV--LAMIGDGATDL 253
           + K  G+  G D      +   K   +++I K     +     +GDGA D+
Sbjct: 124 IVK-DGKLTG-DVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDI 172

>pdb|1J97|A Chain A, Phospho-Aspartyl Intermediate Analogue Of Phosphoserine Phosphatase Length = 211

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
           + F  DST+  +E IDE+A   G  + V + T  AM G + FE++L  R+SL K   + +
Sbjct: 8   ILFXFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEK 67
Query: 145 VQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQL 204
           V+  +++  P  + G +E             ++SGGF   +N I   LG+  +  FAN+L
Sbjct: 68  VEKAIKRITP--TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRL 123
Query: 205 LFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKV--LAMIGDGATDLEVSIF 258
           + K  G+  G D      +   K   +++I K     +     +GDGA D  +S+F
Sbjct: 124 IVK-DGKLTG-DVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAND--ISMF 175

>pdb|1L7O|A Chain A, Crystal Structure Of Phosphoserine Phosphatase In Apo Form Length = 211

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
           + F+ DST+  +E IDE+A   G  + V + T  A  G + FE++L  R+SL K   + +
Sbjct: 8   ILFNFDSTLVNNETIDEIAREAGVEEEVKKITKEAXEGKLNFEQSLRKRVSLLKDLPIEK 67
Query: 145 VQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQL 204
           V+  +++  P  + G +E             ++SGGF   +N I   LG+  +  FAN+L
Sbjct: 68  VEKAIKRITP--TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRL 123
Query: 205 LFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKV--LAMIGDGATDL 253
           + K  G+  G D      +   K   +++I K     +     +GDGA D+
Sbjct: 124 IVK-DGKLTG-DVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDI 172

>pdb|3N28|A Chain A, Crystal Structure Of Probable Phosphoserine Phosphatase From Vibrio Cholerae, Unliganded Form Length = 335

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 9/171 (5%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           +  D+DST    E IDE+A+  G G+ VAE T RAM G + FE++L  R+S  K +  Q+
Sbjct: 110 IVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQI 169
Query: 146 QDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQLL 205
              + +  P L P + E             + SGGF +  + +   L +      +N L 
Sbjct: 170 LSQVRETLP-LMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQ--SNTLE 226
Query: 206 F---KSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDL 253
               K +G+ LG   +  T        A Q   + H       +GDGA DL
Sbjct: 227 IVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHNT---VAVGDGANDL 274

>pdb|3P96|A Chain A, Crystal Structure Of Phosphoserine Phosphatase Serb From Mycobacterium Avium, Native Form Length = 415

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 55  SVQPLEASALGRSENTLPSKEVLQLW--------RTADAVCFDVDSTVCVDEGIDELAEF 106
           SV P    AL  + N + S+E + +         R    + FDVDST+   E I+ LA  
Sbjct: 149 SVPPGADEALRTALNRVSSEEHVDVAVEDYTLERRAKRLIVFDVDSTLVQGEVIEMLAAK 208
Query: 107 CGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXX 166
            GA   VA  T  AM G + F ++L  R++      + V D +  +   L PG       
Sbjct: 209 AGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVAGQ-LELMPGARTTLRT 267
Query: 167 XXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQLLFKS---SGEFLGFDANEPTSR 223
                    ++SGGFR +I P+A  L +  + + AN+L       +G  +G     P   
Sbjct: 268 LRRLGYACGVVSGGFRRIIEPLAEELML--DYVAANELEIVDGTLTGRVVG-----PIID 320
Query: 224 SGGKAAAVQQI--RKAHAYKVLAMIGDGATDLEV 255
             GKA A+++   R          +GDGA D+++
Sbjct: 321 RAGKATALREFAQRAGVPMAQTVAVGDGANDIDM 354

>pdb|4EZE|A Chain A, Crystal Structure Of Had Family Hydrolase T0658 From Salmonella Enterica Subsp. Enterica Serovar Typhi (Target Efi-501419) Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           + FD+DST   +EG+DE+A   G    +   T +AM G + F  +   R+ + K +   V
Sbjct: 111 IAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAV 170
Query: 146 QDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGF 181
            + +  R   LSPG+               +ISGG 
Sbjct: 171 LNAVCDR-MTLSPGLLTILPVIKAKGFKTAIISGGL 205

>pdb|3M1Y|A Chain A, Crystal Structure Of A Phosphoserine Phosphatase (Serb) From Helicobacter Pylori Length = 217

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 64/167 (38%), Gaps = 5/167 (2%)
Query: 88  FDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQ 146
           FD DST+   E I+ LA   G    V   T +A  G   F ++L  R+S  K   L   +
Sbjct: 9   FDFDSTLVNAETIESLARAWGVFDEVKTITLKAXNGETDFHKSLILRVSKLKNXPLKLAK 68
Query: 147 DFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQLLF 206
           +  E  P  L  G  E               SGGF    N    +L +     F+N L+ 
Sbjct: 69  EVCESLP--LFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAA--FSNTLIV 124
Query: 207 KSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDL 253
           ++         +   S S G+   V Q     +     ++GDGA DL
Sbjct: 125 ENDALNGLVTGHXXFSHSKGEXLLVLQRLLNISKTNTLVVGDGANDL 171

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	259
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	3e-85
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	1e-67
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	1e-49
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	6e-42
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	2e-41
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	3e-39
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	7e-39
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	2e-29
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	6e-28
3fvv_A	232	Uncharacterized protein; unknown function, structu	3e-21
2g09_A	297	Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMP	3e-18
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	2e-05

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225

 Score =  252 bits (646), Expect = 3e-85
 Identities = 96/184 (52%), Positives = 132/184 (71%)

Query: 71  LPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEA 130
           +   E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ A
Sbjct: 2   ISHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAA 61

Query: 131 LAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIAS 190
           L  RL+L +PS  QVQ  + ++PP L+PGI ELV +L+  N  V+LISGGFR ++  +AS
Sbjct: 62  LTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVAS 121

Query: 191 VLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGA 250
            L IP  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGA
Sbjct: 122 KLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGA 181

Query: 251 TDLE 254
           TD+E
Sbjct: 182 TDME 185

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} Length = 219

 Score =  207 bits (529), Expect = 1e-67
 Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 11/181 (6%)

Query: 81  RTADAVCFDVDSTVCVDEGIDE-----LAEFCGAGKAVAEWTARAMGGSVPFEEALAARL 135
                + FD DST+   E ++      L +     K +   T   M G + F ++L  RL
Sbjct: 2   NAMKNIIFDFDSTLIKKESLELILEPILQKSPAKLKEIEYITNLGMQGDISFRDSLQKRL 61

Query: 136 SLFKPSLSQVQDFLEKRPP-RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194
           ++  P+   +++F  K  P  L+ GI ELV+ LK     +++ SGG    I P A  L I
Sbjct: 62  AIASPTKQSIKEFSNKYCPNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNI 121

Query: 195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKA-AAVQQIRKAHAYKVLAMIGDGATDL 253
           P ENIFA + ++ S G F   D +     S   A    + +           IGDG TD 
Sbjct: 122 PRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKGLIDGEVI----AIGDGYTDY 177

Query: 254 E 254
           +
Sbjct: 178 Q 178

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236

 Score =  162 bits (411), Expect = 1e-49
 Identities = 30/176 (17%), Positives = 66/176 (37%), Gaps = 12/176 (6%)

Query: 85  AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ 144
            +  D D T+ +++ I  + +               +  ++  +E +     L   SL +
Sbjct: 8   FIICDFDGTITMNDNIINIMKTFA-PPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKE 66

Query: 145 VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQL 204
                     ++  G  E V  +  +    Y+ISGG    + P+   + +  + I+ N  
Sbjct: 67  EITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI-VEKDRIYCNHA 125

Query: 205 LFKSSGEFLGFDANEPTSRSGG------KAAAVQQIRKAHAYKVLAMIGDGATDLE 254
            F    +++  D       +        K + + ++ + + Y +  MIGD  TD+E
Sbjct: 126 SFD--NDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYII--MIGDSVTDVE 177

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317

 Score =  144 bits (366), Expect = 6e-42
 Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           + FD+DST   +EG+DE+A   G    +   T +AM G + F  +   R+ + K +   V
Sbjct: 111 IAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAV 170

Query: 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLL 205
            + +  R   LSPG+  ++  +KA      +ISGG       + +   +  +  F+N + 
Sbjct: 171 LNAVCDRMT-LSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQL--DYAFSNTVE 227

Query: 206 FKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYK---VLAMIGDGATDLE 254
            +     L  +   P   +  K   +  +          ++A  GDGA DL 
Sbjct: 228 IR--DNVLTDNITLPIMNAANKKQTLVDLAARLNIATENIIA-CGDGANDLP 276

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211

 Score =  139 bits (354), Expect = 2e-41
 Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 17/183 (9%)

Query: 79  LWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF 138
           + +    + FD DST+  +E IDE+A   G  + V + T  AM G + FE++L  R+SL 
Sbjct: 1   MEKKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL 60

Query: 139 KP-SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPE 197
           K   + +V+  +++     + G +E +K+LK     V ++SGGF   +N I   LG+  +
Sbjct: 61  KDLPIEKVEKAIKRIT--PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--D 116

Query: 198 NIFANQLLFKS---SGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYK---VLAMIGDGAT 251
             FAN+L+ K    +G+  G        +   K   +++I K         +A +GDGA 
Sbjct: 117 YAFANRLIVKDGKLTGDVEG-----EVLKENAKGEILEKIAKIEGINLEDTVA-VGDGAN 170

Query: 252 DLE 254
           D+ 
Sbjct: 171 DIS 173

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335

 Score =  137 bits (348), Expect = 3e-39
 Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 15/181 (8%)

Query: 80  WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK 139
                 +  D+DST    E IDE+A+  G G+ VAE T RAM G + FE++L  R+S  K
Sbjct: 104 LTKPGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLK 163

Query: 140 PSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENI 199
            +  Q+   + +  P L P + ELV  L A    V + SGGF +  + +   L +  +  
Sbjct: 164 DAPEQILSQVRETLP-LMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSL--DYA 220

Query: 200 FANQLLFKS---SGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYK---VLAMIGDGATDL 253
            +N L   S   +G+ LG         +  KA  +  + + +  +    +A +GDGA DL
Sbjct: 221 QSNTLEIVSGKLTGQVLG-----EVVSAQTKADILLTLAQQYDVEIHNTVA-VGDGANDL 274

Query: 254 E 254
            
Sbjct: 275 V 275

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217

 Score =  133 bits (338), Expect = 7e-39
 Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 17/176 (9%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
             FD DST+   E I+ LA   G    V   T +AM G   F ++L  R+S  K   L  
Sbjct: 7   AVFDFDSTLVNAETIESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLKNMPLKL 66

Query: 145 VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQL 204
            ++  E  P  L  G  ELV  LK  N  V   SGGF    N    +L +  +  F+N L
Sbjct: 67  AKEVCESLP--LFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DAAFSNTL 122

Query: 205 LFKS---SGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYK---VLAMIGDGATDLE 254
           + ++   +G   G         S  K   +  +++         L  +GDGA DL 
Sbjct: 123 IVENDALNGLVTG-----HMMFSHSKGEMLLVLQRLLNISKTNTLV-VGDGANDLS 172

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206

 Score =  109 bits (274), Expect = 2e-29
 Identities = 34/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP---SL 142
            C D++  + V E     AE  G                  ++  +  RL +       L
Sbjct: 5   ACLDLEGVL-VPEIWIAFAEKTGIDA-----LKATTRDIPDYDVLMKQRLRILDEHGLKL 58

Query: 143 SQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFAN 202
             +Q+ +         G  E V  L+   + V ++S  F     P+   LG P   +  +
Sbjct: 59  GDIQEVIATLK--PLEGAVEFVDWLRERFQVV-ILSDTFYEFSQPLMRQLGFPT--LLCH 113

Query: 203 QLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDL 253
           +L    S   +G+   +       K  +V    K+  Y+V+A  GD   D 
Sbjct: 114 KLEIDDSDRVVGYQLRQKD----PKRQSVIAF-KSLYYRVIA-AGDSYNDT 158

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415

 Score =  109 bits (274), Expect = 6e-28
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 17/181 (9%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK- 139
           R    + FDVDST+   E I+ LA   GA   VA  T  AM G + F ++L  R++    
Sbjct: 183 RAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAG 242

Query: 140 PSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENI 199
              + + +   +    L PG    ++ L+       ++SGGFR +I P+A  L +  + +
Sbjct: 243 LPATVIDEVAGQ--LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELML--DYV 298

Query: 200 FANQLLFKS---SGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYK---VLAMIGDGATDL 253
            AN+L       +G  +G     P     GKA A+++  +         +A +GDGA D+
Sbjct: 299 AANELEIVDGTLTGRVVG-----PIIDRAGKATALREFAQRAGVPMAQTVA-VGDGANDI 352

Query: 254 E 254
           +
Sbjct: 353 D 353

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} Length = 232

 Score = 88.2 bits (219), Expect = 3e-21
 Identities = 34/190 (17%), Positives = 63/190 (33%), Gaps = 25/190 (13%)

Query: 85  AVCFDVDSTVCVDEGIDELAEFC----------GAGKAVAEWTARAMGGSVPFEEALAAR 134
              FD+D T+   +   + A+F            A +   +   R   G +  E+A    
Sbjct: 6   LALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFM 65

Query: 135 LSLFK-PSLSQVQD-----FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPI 188
           L L    S  ++         +   P L+    ++V+   A      L++     +  PI
Sbjct: 66  LGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPI 125

Query: 189 ASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAM--- 245
           A   G+  +++ A    ++  G + G     P+ R  GK   V Q        +      
Sbjct: 126 ARAFGV--QHLIATDPEYR-DGRYTGRIEGTPSFRE-GKVVRVNQWLAGMGLALGDFAES 181

Query: 246 --IGDGATDL 253
               D   D+
Sbjct: 182 YFYSDSVNDV 191

>2g09_A Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMPH-1, pyrim nucleotidase 1, P5N-1, NT5C3 protein, AAH38029, BC038029, M LEAD poisoning; HET: PIN; 2.10A {Mus musculus} PDB: 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A Length = 297

 Score = 81.6 bits (201), Expect = 3e-18
 Identities = 19/118 (16%), Positives = 45/118 (38%), Gaps = 4/118 (3%)

Query: 143 SQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN--IF 200
           +++++ +      L  G +    KL+ +   V++ S G   ++  +    G+   N  + 
Sbjct: 129 AKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVV 188

Query: 201 ANQLLFKSSGEFLGFDANEPTS--RSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVS 256
           +N + F  +G   GF         +  G         +      + ++GD   DL ++
Sbjct: 189 SNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMA 246

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 Length = 332

 Score = 44.0 bits (103), Expect = 2e-05
 Identities = 15/142 (10%), Positives = 43/142 (30%), Gaps = 37/142 (26%)

Query: 149 LEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQL---- 204
           + +   +  P  ++ +  L+       +IS  +   +   AS++G+    +   ++    
Sbjct: 97  IAELSAKFVPDAEKAMATLQ-ERWTPVVISTSYTQYLRRTASMIGV-RGELHGTEVDFDS 154

Query: 205 -------------------------LFKSSGEF-----LGFDANEPTSRSG-GKAAAVQQ 233
                                    LF+   E      +        +     KA  ++ 
Sbjct: 155 IAVPEGLREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRG 214

Query: 234 IRKAHAYKVLAMIGDGATDLEV 255
             ++       ++GD  +D ++
Sbjct: 215 YCESKGIDFPVVVGDSISDYKM 236

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	259
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.91
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	99.91
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	99.89
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	99.88
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.88
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.88
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.88
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.86
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	99.86
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.76
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.85
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.84
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	99.84
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.83
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.79
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	99.79
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	99.78
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.77
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	99.77
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	99.77
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.73
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.72
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.72
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.71
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.71
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.7
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.69
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.69
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.69
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.69
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.69
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.69
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.69
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.69
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.68
4gxt_A	385	A conserved functionally unknown protein; structur	99.68
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.68
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.68
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.68
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.67
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.67
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.67
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.66
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.66
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.66
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.66
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.66
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.65
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.65
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.65
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.65
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.65
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.65
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.65
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.65
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.64
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.64
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.63
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.63
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.62
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.62
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.62
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.62
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.62
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.61
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.61
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.61
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.6
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.6
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.6
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.6
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.6
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.59
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.59
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.58
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.58
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.57
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.57
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.57
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.56
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.56
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.55
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.55
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.54
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.54
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.53
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.53
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.52
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.51
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.5
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.49
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.49
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.48
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.48
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.47
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.47
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.45
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.45
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	99.43
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.42
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.38
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.38
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.37
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.36
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.33
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.32
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.31
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.31
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.31
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.31
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.29
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.29
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.29
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.27
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.27
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.27
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.27
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.26
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.26
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.25
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.21
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.2
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.18
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.15
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.15
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.13
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.08
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.06
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.04
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.0
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	98.97
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.95
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	98.94
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.93
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	98.92
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	98.91
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	98.89
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	98.88
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	98.86
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	98.84
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	98.79
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	98.76
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	98.7
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	98.67
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	98.6
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	98.58
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.36
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.83
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.81
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.71
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	97.59
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	97.46
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	97.42
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	97.39
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.38
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	96.87
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.8
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.77
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.64
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.5
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	96.2
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	95.72
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	94.84
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	94.37
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	90.22
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	87.59
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	86.65
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	84.3
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	82.31

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.91  E-value=1.3e-23  Score=172.55  Aligned_cols=185  Identities=52%  Similarity=0.889  Sum_probs=137.3

Q ss_pred             HHHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCC
Q 025042           74 KEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRP  153 (259)
Q Consensus        74 ~~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  153 (259)
                      .+..+.+.++++|+||+||||++.+.+..+.+..+.+........++..+..++.+.+......+....+.+.++.....
T Consensus         5 ~~m~~~~~~~k~viFD~DGTLvd~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (225)
T 1nnl_A            5 SELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQP   84 (225)
T ss_dssp             CHHHHHHHHCSEEEEETBTTTBSSCHHHHHHHHTTCTTTC------------CHHHHHHHHHHHHCCCHHHHHHHHHHSC
T ss_pred             HHHHHHHhhCCEEEEeCcccccccccHHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhcCCHHHHHHHHHhcc
Confidence            34556677899999999999999988777777776543323333344444456666665555555555566666666655


Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++++|++....++.+++++|+..+++|...+.++.++.+.+.....+.+.+++|++.++.
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~  164 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  164 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHH
Confidence            67999999999999999999999999999999999999999743588887777777777776554444445689999999


Q ss_pred             HHHHcCCCeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+++++||||+.||+++++.
T Consensus       165 ~~~~~~~~~~~~vGDs~~Di~~a~~  189 (225)
T 1nnl_A          165 LKEKFHFKKIIMIGDGATDMEACPP  189 (225)
T ss_dssp             HHHHHCCSCEEEEESSHHHHTTTTT
T ss_pred             HHHHcCCCcEEEEeCcHHhHHHHHh
Confidence            9999888889999999999999875

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=99.91  E-value=1.3e-25  Score=213.58  Aligned_cols=194  Identities=13%  Similarity=0.181  Sum_probs=139.8

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch-----------HHHHHHH
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-----------IDELAEF  106 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-----------~~~l~~~  106 (259)
                      +++.|.+|||++++.++.+-...+++++++|+++|+++++|.+++++++|||||||||.++.           .+++...
T Consensus       375 i~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~l~~  454 (736)
T 3rfu_A          375 VSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFVEDNALAL  454 (736)
T ss_dssp             HHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSCHHHHHHH
T ss_pred             HHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCCCHHHHHHH
Confidence            67888999999988887776777899999999999999999999999999999999998742           1111111


Q ss_pred             -----hcCchhH-HHHHHHHcCCCC------cH---------------------HHHHHHHHhhcCCCH----HHHHHHH
Q 025042          107 -----CGAGKAV-AEWTARAMGGSV------PF---------------------EEALAARLSLFKPSL----SQVQDFL  149 (259)
Q Consensus       107 -----~~~~~~~-~~~~~~~~~~~~------~~---------------------~~~~~~~~~~~~~~~----~~i~~~~  149 (259)
                           ...+++. .++.+.......      ++                     .+.+..    .....    +..+++.
T Consensus       455 aa~le~~s~hPla~Aiv~~a~~~~~~~~~~~~f~~~~g~gv~~~~~g~~~~~G~~~~~~~----~~~~~~~~~~~~~~~~  530 (736)
T 3rfu_A          455 AAALEHQSEHPLANAIVHAAKEKGLSLGSVEAFEAPTGKGVVGQVDGHHVAIGNARLMQE----HGGDNAPLFEKADELR  530 (736)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHTTCCCCCCCSCCCCCTTTEEEECSSSSCEEEESHHHHHH----HCCCCHHHHHHHHHHH
T ss_pred             HHHHhhcCCChHHHHHHHHHHhcCCCccCcccccccCCceEEEEECCEEEEEcCHHHHHH----cCCChhHHHHHHHHHH
Confidence                 1111221 223222211000      00                     011100    00000    1111221


Q ss_pred             H------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCc
Q 025042          150 E------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGE  211 (259)
Q Consensus       150 ~------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~  211 (259)
                      .                  ...++++|++.+.++.|+++|++++|+|||+..+++.+++++|++  ++++..        
T Consensus       531 ~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~--~v~a~~--------  600 (736)
T 3rfu_A          531 GKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK--KVVAEI--------  600 (736)
T ss_dssp             HTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC--CEECSC--------
T ss_pred             hcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC--EEEEec--------
Confidence            1                  113689999999999999999999999999999999999999997  777763        


Q ss_pred             eecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          212 FLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       212 ~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                                 .|++|.+.++.++++ | +.|+|+|||.||+||++.
T Consensus       601 -----------~P~~K~~~v~~l~~~-g-~~V~~vGDG~ND~paL~~  634 (736)
T 3rfu_A          601 -----------MPEDKSRIVSELKDK-G-LIVAMAGDGVNDAPALAK  634 (736)
T ss_dssp             -----------CHHHHHHHHHHHHHH-S-CCEEEEECSSTTHHHHHH
T ss_pred             -----------CHHHHHHHHHHHHhc-C-CEEEEEECChHhHHHHHh
Confidence                       478999999999998 5 799999999999999985

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=99.89  E-value=1.1e-23  Score=198.53  Aligned_cols=196  Identities=15%  Similarity=0.176  Sum_probs=137.8

Q ss_pred             ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccchH-----------HHHHH
Q 025042           37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGI-----------DELAE  105 (259)
Q Consensus        37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~~-----------~~l~~  105 (259)
                      .+++.|++|||++++.++.+-...+.+++++|+++|++.++|.+++++++|||||||||.++..           +++..
T Consensus       280 ~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~l~  359 (645)
T 3j08_A          280 LIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLR  359 (645)
T ss_dssp             THHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSCHHHHHH
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCCHHHHHH
Confidence            3677888899998887777666668999999999999999999999999999999999987421           11111


Q ss_pred             H---h--cCchhH-HHHHHHHcCCCC------cH-----------------HHHHHHHHhhcCCCHHHH----HHHHHh-
Q 025042          106 F---C--GAGKAV-AEWTARAMGGSV------PF-----------------EEALAARLSLFKPSLSQV----QDFLEK-  151 (259)
Q Consensus       106 ~---~--~~~~~~-~~~~~~~~~~~~------~~-----------------~~~~~~~~~~~~~~~~~i----~~~~~~-  151 (259)
                      .   .  ...++. .++.........      ++                 .+.+...   -....+.+    .++... 
T Consensus       360 ~aa~~e~~s~hPla~Aiv~~a~~~g~~~~~~~~~~~~~g~g~~~~~v~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~g  436 (645)
T 3j08_A          360 LAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGILVGNKRLMEDF---GVAVSNEVELALEKLEREA  436 (645)
T ss_dssp             HHHHHHTTCCSHHHHHHHHHHHHTTCCCCSCCCCEEETTTEEEETTEEEECHHHHHHT---TCCCCHHHHHHHHHHHTTT
T ss_pred             HHHHHhhcCCChhHHHHHHHHHhcCCCcCCccceEEecCCceEEEEEEECCHHHHHhc---CCCccHHHHHHHHHHHhcC
Confidence            1   1  111111 222221110000      00                 0000000   00001111    112111 


Q ss_pred             -----------------CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceec
Q 025042          152 -----------------RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLG  214 (259)
Q Consensus       152 -----------------~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g  214 (259)
                                       ..++++|++.+.+++|+++|++++|+|||+...++.+++++|++  .++++.           
T Consensus       437 ~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~~~~-----------  503 (645)
T 3j08_A          437 KTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEV-----------  503 (645)
T ss_dssp             CCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSC-----------
T ss_pred             CeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEeC-----------
Confidence                             13579999999999999999999999999999999999999997  777764           


Q ss_pred             ccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          215 FDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       215 ~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                              .|++|.+.+++++++   ++|+|+|||.||+||++.+
T Consensus       504 --------~P~~K~~~v~~l~~~---~~v~~vGDg~ND~~al~~A  537 (645)
T 3j08_A          504 --------LPHQKSEEVKKLQAK---EVVAFVGDGINDAPALAQA  537 (645)
T ss_dssp             --------CTTCHHHHHHHHTTT---CCEEEEECSSSCHHHHHHS
T ss_pred             --------CHHhHHHHHHHHhhC---CeEEEEeCCHhHHHHHHhC
Confidence                    489999999999887   6899999999999999853

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=99.88  E-value=2.7e-23  Score=198.24  Aligned_cols=195  Identities=15%  Similarity=0.178  Sum_probs=137.7

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch-----------HHHHHHH
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-----------IDELAEF  106 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-----------~~~l~~~  106 (259)
                      +++.|++|||++++.++.+-...+++++++|+++|++.++|.+++++++|||||||||.++.           .+++...
T Consensus       359 i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~~~~~l~~  438 (723)
T 3j09_A          359 IAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRL  438 (723)
T ss_dssp             HHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSCHHHHHHH
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCCHHHHHHH
Confidence            67788889999888777766666899999999999999999999999999999999998742           1122111


Q ss_pred             ---h--cCchhH-HHHHHHHcCCCC------cH-----------------HHHHHHHHhhcCCCHHHH----HHHHH---
Q 025042          107 ---C--GAGKAV-AEWTARAMGGSV------PF-----------------EEALAARLSLFKPSLSQV----QDFLE---  150 (259)
Q Consensus       107 ---~--~~~~~~-~~~~~~~~~~~~------~~-----------------~~~~~~~~~~~~~~~~~i----~~~~~---  150 (259)
                         .  ...++. .++.+.......      ++                 .+.+...   -....+.+    +++..   
T Consensus       439 aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~g~g~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~g~  515 (723)
T 3j09_A          439 AAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGILVGNKRLMEDF---GVAVSNEVELALEKLEREAK  515 (723)
T ss_dssp             HHHHHTTCCSHHHHHHHHHHHHTTCCCCSCCCCEEETTTEEEETTEEEECHHHHHHT---TCCCCHHHHHHHHHHHTTTC
T ss_pred             HHHHhccCCCchhHHHHHHHHhcCCCcCCccceEEecCCceEEEEEEECCHHHHHhc---CCCccHHHHHHHHHHHhcCC
Confidence               1  111111 222221110000      00                 0111000   00001111    11111   


Q ss_pred             ---------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecc
Q 025042          151 ---------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGF  215 (259)
Q Consensus       151 ---------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~  215 (259)
                                     ...++++|++.+.++.|+++|++++|+|||+..+++.+++++|++  .++++.            
T Consensus       516 ~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~--~~~~~~------------  581 (723)
T 3j09_A          516 TAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEV------------  581 (723)
T ss_dssp             EEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSC------------
T ss_pred             eEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc--EEEccC------------
Confidence                           113589999999999999999999999999999999999999997  777764            


Q ss_pred             cCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          216 DANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       216 ~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                             .|++|.+.++.++++   ++|+|+|||.||+||++.+
T Consensus       582 -------~P~~K~~~v~~l~~~---~~v~~vGDg~ND~~al~~A  615 (723)
T 3j09_A          582 -------LPHQKSEEVKKLQAK---EVVAFVGDGINDAPALAQA  615 (723)
T ss_dssp             -------CTTCHHHHHHHHTTT---CCEEEEECSSTTHHHHHHS
T ss_pred             -------CHHHHHHHHHHHhcC---CeEEEEECChhhHHHHhhC
Confidence                   489999999999887   6899999999999999853

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.88  E-value=7.7e-22  Score=177.24  Aligned_cols=173  Identities=28%  Similarity=0.413  Sum_probs=148.3

Q ss_pred             cCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCH-HHHHHHHHhCCCCCCcc
Q 025042           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEKRPPRLSPG  159 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~p~  159 (259)
                      +++++++||+||||++.+.++.+....+.+.....++.+++.+..++.+.+..+...+.+.. +.+..+...  ..++||
T Consensus       183 ~~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~pg  260 (415)
T 3p96_A          183 RAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVAGQ--LELMPG  260 (415)
T ss_dssp             TCCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHHHHH--CCBCTT
T ss_pred             cCCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHHHHh--CccCcc
Confidence            47899999999999999999999999888887888888899999999999998888776544 334455554  478999


Q ss_pred             HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC
Q 025042          160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA  239 (259)
Q Consensus       160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g  239 (259)
                      +.++++.|+++|++++++||+....++.+++.+|++  .+|++.+.+ .++.++|....+. ..+++|++.++.+++++|
T Consensus       261 ~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~--~~~~~~l~~-~dg~~tg~~~~~v-~~~kpk~~~~~~~~~~~g  336 (415)
T 3p96_A          261 ARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD--YVAANELEI-VDGTLTGRVVGPI-IDRAGKATALREFAQRAG  336 (415)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS--EEEEECEEE-ETTEEEEEECSSC-CCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc--ceeeeeEEE-eCCEEEeeEccCC-CCCcchHHHHHHHHHHcC
Confidence            999999999999999999999999999999999997  889988877 5677777654432 346789999999999999


Q ss_pred             C--CeEEEEecCcccHHhhhcC
Q 025042          240 Y--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       240 ~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +  ++++|||||.||++|++.+
T Consensus       337 i~~~~~i~vGD~~~Di~~a~~a  358 (415)
T 3p96_A          337 VPMAQTVAVGDGANDIDMLAAA  358 (415)
T ss_dssp             CCGGGEEEEECSGGGHHHHHHS
T ss_pred             cChhhEEEEECCHHHHHHHHHC
Confidence            8  7999999999999999753

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.88  E-value=4.7e-22  Score=161.79  Aligned_cols=174  Identities=28%  Similarity=0.351  Sum_probs=134.1

Q ss_pred             ccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC-HHHHHHHHHhCCCCCCc
Q 025042           80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQDFLEKRPPRLSP  158 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~p  158 (259)
                      |.++++|+||+||||++.+....+.+..+.+........++..+..++.+.+......+.+. .+.+.++...  ..++|
T Consensus         1 M~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~   78 (217)
T 3m1y_A            1 MSLQKLAVFDFDSTLVNAETIESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLKNMPLKLAKEVCES--LPLFE   78 (217)
T ss_dssp             -CCCEEEEEECBTTTBSSCHHHHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTTTTCBHHHHHHHHTT--CCBCB
T ss_pred             CCCCcEEEEeCCCCCCCchhHHHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHhcCCCHHHHHHHHhc--CcCCC
Confidence            46789999999999999998888888777655444444455556677778777777666543 3444555554  56999


Q ss_pred             cHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHc
Q 025042          159 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAH  238 (259)
Q Consensus       159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~  238 (259)
                      ++.++++.|+++|++++++|++....++.+++.+|+.  .+|...+..+ ++.+++..... ...+++|+..++.+++++
T Consensus        79 ~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~--~~f~~~~~~~-~~~~~~~~~~~-~~~~k~k~~~~~~~~~~~  154 (217)
T 3m1y_A           79 GALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLD--AAFSNTLIVE-NDALNGLVTGH-MMFSHSKGEMLLVLQRLL  154 (217)
T ss_dssp             THHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEE-TTEEEEEEEES-CCSTTHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc--hhccceeEEe-CCEEEeeeccC-CCCCCChHHHHHHHHHHc
Confidence            9999999999999999999999999999999999997  7787766553 45555543332 345688999999999999


Q ss_pred             CC--CeEEEEecCcccHHhhhcC
Q 025042          239 AY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       239 g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      |+  ++++||||+.||++|++.+
T Consensus       155 g~~~~~~i~vGDs~~Di~~a~~a  177 (217)
T 3m1y_A          155 NISKTNTLVVGDGANDLSMFKHA  177 (217)
T ss_dssp             TCCSTTEEEEECSGGGHHHHTTC
T ss_pred             CCCHhHEEEEeCCHHHHHHHHHC
Confidence            98  8999999999999999864

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.88  E-value=1.6e-21  Score=169.27  Aligned_cols=175  Identities=21%  Similarity=0.340  Sum_probs=147.1

Q ss_pred             hccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCH-HHHHHHHHhCCCCCC
Q 025042           79 LWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEKRPPRLS  157 (259)
Q Consensus        79 ~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~  157 (259)
                      .+++.++|+||+||||++.+..+.+....+.......+...++.+..++.+.+......+.+.. +.+.++...  ..++
T Consensus       104 ~~~~~kaviFDlDGTLid~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i~~~~~~--~~l~  181 (317)
T 4eze_A          104 PLPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDR--MTLS  181 (317)
T ss_dssp             SCCCSCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHT--CCBC
T ss_pred             cCCCCCEEEEcCCCCccCCccHHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHhC--CEEC
Confidence            3678899999999999999988888888887777778888888899999998888887776543 344555554  5799


Q ss_pred             ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHH
Q 025042          158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKA  237 (259)
Q Consensus       158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~  237 (259)
                      ||+.++++.|+++|++++++|++....++.+++.+|++  .+|.+.+.++ ++.++|...... ..+++|++.++.++++
T Consensus       182 pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~--~~f~~~l~~~-dg~~tg~i~~~~-~~~kpkp~~~~~~~~~  257 (317)
T 4eze_A          182 PGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLD--YAFSNTVEIR-DNVLTDNITLPI-MNAANKKQTLVDLAAR  257 (317)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEECEEEE-TTEEEEEECSSC-CCHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCC--eEEEEEEEee-CCeeeeeEeccc-CCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999997  8888887763 566776654433 3457899999999999


Q ss_pred             cCC--CeEEEEecCcccHHhhhcC
Q 025042          238 HAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       238 ~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +|+  ++++|||||.||++|++.+
T Consensus       258 lgv~~~~~i~VGDs~~Di~aa~~A  281 (317)
T 4eze_A          258 LNIATENIIACGDGANDLPMLEHA  281 (317)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             cCCCcceEEEEeCCHHHHHHHHHC
Confidence            998  7999999999999999753

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.86  E-value=4.3e-21  Score=158.07  Aligned_cols=175  Identities=20%  Similarity=0.251  Sum_probs=126.1

Q ss_pred             cCcCEEEEeCCCcccccchHHHHHHHhcC---c---h----hHHHHHHHHcCCCCcHHHHHHHHHhhcCC-CHHHH----
Q 025042           81 RTADAVCFDVDSTVCVDEGIDELAEFCGA---G---K----AVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQV----  145 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~~~l~~~~~~---~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i----  145 (259)
                      .++++++||+||||++.+....+......   .   .    ........+..+..+..+........+.+ ..+.+    
T Consensus         2 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (232)
T 3fvv_A            2 TTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWH   81 (232)
T ss_dssp             CCCEEEEECCBTTTBSSCHHHHHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred             CCCcEEEEeCCCCCcCCchHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            45689999999999998865444433221   1   1    11233444555666776666554443332 23333    


Q ss_pred             HHHHHhC-CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCC
Q 025042          146 QDFLEKR-PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRS  224 (259)
Q Consensus       146 ~~~~~~~-~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~  224 (259)
                      .++.... ...++||+.++|+.|+++|++++|+|++....++.+++.+|++  .++++.+.+ .++.++|...+.. +.+
T Consensus        82 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~--~~~~~~~~~-~~~~~~g~~~~~~-~~~  157 (232)
T 3fvv_A           82 EEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ--HLIATDPEY-RDGRYTGRIEGTP-SFR  157 (232)
T ss_dssp             HHHHHHTTGGGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC--EEEECEEEE-ETTEEEEEEESSC-SST
T ss_pred             HHHHHHhhhhhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC--EEEEcceEE-ECCEEeeeecCCC-Ccc
Confidence            2333332 2367999999999999999999999999999999999999997  888887776 4667777655433 345


Q ss_pred             CChHHHHHHHHHHcC---C--CeEEEEecCcccHHhhhcC
Q 025042          225 GGKAAAVQQIRKAHA---Y--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       225 ~~K~~~v~~l~~~~g---~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ++|...++.+++++|   +  ++|+|||||.||++|++.+
T Consensus       158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~a  197 (232)
T 3fvv_A          158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAV  197 (232)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHS
T ss_pred             hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhC
Confidence            789999999999888   6  7999999999999999753

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=99.86  E-value=6.3e-23  Score=198.89  Aligned_cols=219  Identities=14%  Similarity=0.178  Sum_probs=139.5

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccchH------------HHHH-
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGI------------DELA-  104 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~~------------~~l~-  104 (259)
                      +++.|++|||++|++++.+-...+.+++++|+++|+..++|.++.++++|||||||||.+++.            +.+. 
T Consensus       327 v~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~~~~ll~  406 (920)
T 1mhs_A          327 LAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLML  406 (920)
T ss_dssp             HHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCCCCTHHHH
T ss_pred             HHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCCCHHHHHH
Confidence            678889999999998888777778999999999999999999999999999999999887420            1111 


Q ss_pred             H-Hhc-C---c--hhH-HHHHHH---HcC-----CC------CcH-------------------------HHHHHHHHhh
Q 025042          105 E-FCG-A---G--KAV-AEWTAR---AMG-----GS------VPF-------------------------EEALAARLSL  137 (259)
Q Consensus       105 ~-~~~-~---~--~~~-~~~~~~---~~~-----~~------~~~-------------------------~~~~~~~~~~  137 (259)
                      . ... .   .  ++. .++...   ...     ..      .+|                         .+.+..+...
T Consensus       407 ~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~  486 (920)
T 1mhs_A          407 TACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE  486 (920)
T ss_dssp             HHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC
T ss_pred             HHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc
Confidence            1 111 0   1  221 122111   000     00      000                         0111100000


Q ss_pred             cCC-CH---HHH----HHHHH-----------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHH
Q 025042          138 FKP-SL---SQV----QDFLE-----------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN  186 (259)
Q Consensus       138 ~~~-~~---~~i----~~~~~-----------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~  186 (259)
                      ... ..   +.+    +++..                       ...+++||++++.++.|++.|++++|+|||+..++.
T Consensus       487 ~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~  566 (920)
T 1mhs_A          487 DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIAR  566 (920)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHH
Confidence            000 00   011    11111                       014589999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCcEe-ecceeecCCCceecc--------cCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhh
Q 025042          187 PIASVLGIPPENIF-ANQLLFKSSGEFLGF--------DANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSI  257 (259)
Q Consensus       187 ~i~~~lgi~~~~~~-~~~l~~~~~~~~~g~--------~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~  257 (259)
                      .+++++|+.. .++ .+.+..+.+..+.+.        ........|++|..+++.++++ | +.|+|+|||.||+||++
T Consensus       567 aIA~~lGI~~-~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~-g-~~Vam~GDGvNDapaLk  643 (920)
T 1mhs_A          567 ETSRQLGLGT-NIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQR-G-YLVAMTGDGVNDAPSLK  643 (920)
T ss_dssp             HHHHHHTSSC-SCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTT-T-CCCEECCCCGGGHHHHH
T ss_pred             HHHHHcCCCc-cccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhC-C-CeEEEEcCCcccHHHHH
Confidence            9999999962 111 111111000011100        0112335689999999999987 6 79999999999999998


Q ss_pred             cC
Q 025042          258 FI  259 (259)
Q Consensus       258 ~v  259 (259)
                      .+
T Consensus       644 ~A  645 (920)
T 1mhs_A          644 KA  645 (920)
T ss_dssp             HS
T ss_pred             hC
Confidence            53

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.76  E-value=3.3e-23  Score=175.31  Aligned_cols=175  Identities=14%  Similarity=0.255  Sum_probs=115.9

Q ss_pred             ccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch-HHHH------HHHhc-Cc----hhH-HHHHHHHcCCCC--
Q 025042           61 ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-IDEL------AEFCG-AG----KAV-AEWTARAMGGSV--  125 (259)
Q Consensus        61 ~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~-~~~l------~~~~~-~~----~~~-~~~~~~~~~~~~--  125 (259)
                      +++++++|+++|+++++|.++++++|+||||||||+++. +..+      ...+. ..    ++. ..+.........  
T Consensus         6 ~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~~~~~~l~~~~~~e~~s~hp~a~ai~~~~~~~g~~~   85 (263)
T 2yj3_A            6 YEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFIGDSLSLAYAASVEALSSHPIAKAIVKYAKEQGVKI   85 (263)
Confidence            599999999999999999999999999999999998763 1111      11111 00    001 111111100000  


Q ss_pred             ----cHHHHHHHHH----hhc---CCCHH---HH----H-HHHHh--CCCCCCccHHHHHHHHHHCCCcEEEEeCCcccc
Q 025042          126 ----PFEEALAARL----SLF---KPSLS---QV----Q-DFLEK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHM  184 (259)
Q Consensus       126 ----~~~~~~~~~~----~~~---~~~~~---~i----~-~~~~~--~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~  184 (259)
                          .+.+......    ...   -+...   .+    . .+...  ..+.++|++.++|+.|+++|++++++||++...
T Consensus        86 ~~~~~~~~~~G~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~  165 (263)
T 2yj3_A           86 LEVKDFKEISGIGVRGKISDKIIEVKKAENNNDIAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDK  165 (263)
Confidence                0000000000    000   00000   00    1 11111  235799999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          185 INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       185 ~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      ++.+++++|++  ++|...+                   |+.|..+++++....  ++|+|||||.||+++++.
T Consensus       166 ~~~~~~~~gl~--~~f~~~~-------------------p~~k~~~~~~l~~~~--~~~~~VGD~~~D~~aa~~  216 (263)
T 2yj3_A          166 VKELSKELNIQ--EYYSNLS-------------------PEDKVRIIEKLKQNG--NKVLMIGDGVNDAAALAL  216 (263)
Confidence            99999999997  6776642                   778999988887763  689999999999999875

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.85  E-value=5.4e-20  Score=148.44  Aligned_cols=172  Identities=31%  Similarity=0.466  Sum_probs=124.4

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCH-HHHHHHHHhCCCCCCccH
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEKRPPRLSPGI  160 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~p~~  160 (259)
                      ++++|+||+||||++++.+..+.+..+.+......+.+...+..++.+.+........+.. ....+....  ..+.|++
T Consensus         4 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~   81 (211)
T 1l7m_A            4 KKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKR--ITPTEGA   81 (211)
T ss_dssp             CCEEEEEECCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHT--CCBCTTH
T ss_pred             CCcEEEEeCCCCCCCccHHHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHhcCCCHHHHHHHHHh--CCCCccH
Confidence            5789999999999999887777777776655555566666666666665554444444332 333444443  4578999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042          161 DELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY  240 (259)
Q Consensus       161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~  240 (259)
                      .++++.++++|++++++|++....++.+++.+|++  .++.+.+... ++.+.+....+. ..+.+|+..+..+++++|+
T Consensus        82 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~-~~~~~K~~~l~~~~~~lgi  157 (211)
T 1l7m_A           82 EETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD--YAFANRLIVK-DGKLTGDVEGEV-LKENAKGEILEKIAKIEGI  157 (211)
T ss_dssp             HHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEE-TTEEEEEEECSS-CSTTHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC--eEEEeeeEEE-CCEEcCCcccCc-cCCccHHHHHHHHHHHcCC
Confidence            99999999999999999999888888889999986  5665544332 222333222211 2356899999999999998


Q ss_pred             --CeEEEEecCcccHHhhhcC
Q 025042          241 --KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 --~~v~~vGDg~ND~~al~~v  259 (259)
                        ++|++|||+.||++|++.+
T Consensus       158 ~~~~~~~iGD~~~Di~~~~~a  178 (211)
T 1l7m_A          158 NLEDTVAVGDGANDISMFKKA  178 (211)
T ss_dssp             CGGGEEEEECSGGGHHHHHHC
T ss_pred             CHHHEEEEecChhHHHHHHHC
Confidence              7899999999999999753

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.84  E-value=4.3e-20  Score=149.54  Aligned_cols=172  Identities=31%  Similarity=0.496  Sum_probs=123.8

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcC-----chhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHh-CCCC
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGA-----GKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEK-RPPR  155 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~  155 (259)
                      |+|+|+||+||||++.+...........     +........+...+...+.+.+...........+.+.++... ....
T Consensus         3 mik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (219)
T 3kd3_A            3 AMKNIIFDFDSTLIKKESLELILEPILQKSPAKLKEIEYITNLGMQGDISFRDSLQKRLAIASPTKQSIKEFSNKYCPNL   82 (219)
T ss_dssp             -CEEEEECCCCCCBSSCHHHHHHTTTTTTCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHCCCBHHHHHHHHHHHTTTT
T ss_pred             cceEEEEeCCCCCcCcccHHHHHHHHHhcccchHHHHHHHHHHHhcCcccHHHHHHHHHhhccCCHHHHHHHHHhhcccc
Confidence            6899999999999998765543332211     122334455566677788887777777666666666666655 3356


Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR  235 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~  235 (259)
                      ++|++.++++.|+++|++++++|++....++.+++.+|++.+.+|...+.+..++.+.+.....  +   .|...++.++
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l~  157 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSN--G---ACDSKLSAFD  157 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTT--S---TTTCHHHHHH
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCC--C---CcccHHHHHH
Confidence            8999999999999999999999999999999999999996446787777666666655433221  2   2333455555


Q ss_pred             HHcCC--CeEEEEecCcccHHhhhc
Q 025042          236 KAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       236 ~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +.+|+  ++++|||||.||++|+++
T Consensus       158 ~~~~~~~~~~~~vGD~~~Di~~~~~  182 (219)
T 3kd3_A          158 KAKGLIDGEVIAIGDGYTDYQLYEK  182 (219)
T ss_dssp             HHGGGCCSEEEEEESSHHHHHHHHH
T ss_pred             HHhCCCCCCEEEEECCHhHHHHHhC
Confidence            55555  899999999999999863

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=99.84  E-value=4.7e-22  Score=192.56  Aligned_cols=219  Identities=15%  Similarity=0.161  Sum_probs=139.6

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccch---------------HHH
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG---------------IDE  102 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~~---------------~~~  102 (259)
                      +++.|++|||++|++++.+-...+.+++++|+++|+..++|.++.++++|||||||||.+++               .+.
T Consensus       278 v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~  357 (885)
T 3b8c_A          278 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQ  357 (885)
T ss_dssp             HHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHH
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEeccCCCCCHHH
Confidence            67889999999999998887777899999999999999999999999999999999987641               011


Q ss_pred             HH---HHhc---CchhH-HHHHHHHcC-----C------CCcHHHHH-----------HHHHhhcCCCHH----------
Q 025042          103 LA---EFCG---AGKAV-AEWTARAMG-----G------SVPFEEAL-----------AARLSLFKPSLS----------  143 (259)
Q Consensus       103 l~---~~~~---~~~~~-~~~~~~~~~-----~------~~~~~~~~-----------~~~~~~~~~~~~----------  143 (259)
                      +.   ..+.   .+++. .++......     .      ..+|....           .......+|.++          
T Consensus       358 ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~  437 (885)
T 3b8c_A          358 VLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASN  437 (885)
T ss_dssp             HHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCS
T ss_pred             HHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCch
Confidence            11   1111   12222 222221110     0      00110000           000000011111          


Q ss_pred             ----HH----HHHHH-------------------------------hCCCCCCccHHHHHHHHHHCCCcEEEEeCCcccc
Q 025042          144 ----QV----QDFLE-------------------------------KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHM  184 (259)
Q Consensus       144 ----~i----~~~~~-------------------------------~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~  184 (259)
                          .+    +++..                               ...+++||++++.++.|++.|++++|+|||+..+
T Consensus       438 ~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~t  517 (885)
T 3b8c_A          438 DLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI  517 (885)
T ss_dssp             TTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHH
T ss_pred             hhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHH
Confidence                11    11110                               0135889999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEeecc-ee---ecC---CC---ceecccCCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHH
Q 025042          185 INPIASVLGIPPENIFANQ-LL---FKS---SG---EFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE  254 (259)
Q Consensus       185 ~~~i~~~lgi~~~~~~~~~-l~---~~~---~~---~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~  254 (259)
                      +..+++++|+.. +.+... +.   .++   +.   .+...........|++|..+++.++++ | +.|+|+|||.||+|
T Consensus       518 A~~iA~~lGi~~-~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~-g-~~Vam~GDGvNDap  594 (885)
T 3b8c_A          518 GKETGRRLGMGT-NMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-K-HIVGMTGDGVNDAP  594 (885)
T ss_dssp             HTHHHHTTTCTT-CCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT-T-CCCCBCCCSSTTHH
T ss_pred             HHHHHHHhCCcc-ccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHC-C-CeEEEEcCCchhHH
Confidence            999999999952 111000 00   000   00   000000112234688999999999987 6 79999999999999


Q ss_pred             hhhcC
Q 025042          255 VSIFI  259 (259)
Q Consensus       255 al~~v  259 (259)
                      |++.+
T Consensus       595 aLk~A  599 (885)
T 3b8c_A          595 ALKKA  599 (885)
T ss_dssp             HHHHS
T ss_pred             HHHhC
Confidence            99853

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.83  E-value=4.3e-20  Score=161.22  Aligned_cols=174  Identities=30%  Similarity=0.384  Sum_probs=142.4

Q ss_pred             cCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccH
Q 025042           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGI  160 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~  160 (259)
                      ...++++||+||||++.+.+..+....+.......+...+..+..++.+.+......+.+......+.+... ..++||+
T Consensus       105 ~~~~~viFD~DgTLi~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~pg~  183 (335)
T 3n28_A          105 TKPGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQILSQVRET-LPLMPEL  183 (335)
T ss_dssp             TSCCEEEECSSCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBTTHHHHHHTT-CCCCTTH
T ss_pred             cCCCEEEEcCCCCCcChHHHHHHHHHcCCchHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHHh-CCcCcCH
Confidence            456899999999999988888888888877777777777888888999888888777665444433333332 5689999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042          161 DELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY  240 (259)
Q Consensus       161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~  240 (259)
                      .++++.|++.|++++++|++....++.+++++|++  .+|.+.+.+ .++.+++....+. ..+++|++.++.+++++|+
T Consensus       184 ~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~--~~~~~~l~~-~d~~~tg~~~~~~-~~~kpk~~~~~~~~~~lgi  259 (335)
T 3n28_A          184 PELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLD--YAQSNTLEI-VSGKLTGQVLGEV-VSAQTKADILLTLAQQYDV  259 (335)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEE-ETTEEEEEEESCC-CCHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCC--eEEeeeeEe-eCCeeeeeecccc-cChhhhHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999997  888888776 4566666544433 3357899999999999998


Q ss_pred             --CeEEEEecCcccHHhhhcC
Q 025042          241 --KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 --~~v~~vGDg~ND~~al~~v  259 (259)
                        ++|+|||||.||++|++.+
T Consensus       260 ~~~~~v~vGDs~nDi~~a~~a  280 (335)
T 3n28_A          260 EIHNTVAVGDGANDLVMMAAA  280 (335)
T ss_dssp             CGGGEEEEECSGGGHHHHHHS
T ss_pred             ChhhEEEEeCCHHHHHHHHHC
Confidence              7999999999999999853

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.79  E-value=4.6e-20  Score=157.74  Aligned_cols=81  Identities=22%  Similarity=0.294  Sum_probs=71.2

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++++|++....++.+++.+|+.  .+|...                   .|.+|..++++
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~f~~i-------------------~~~~K~~~~~~  220 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEV-------------------LPHQKSEEVKK  220 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSC-------------------CTTCHHHHHHH
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc--eeeeec-------------------ChHHHHHHHHH
Confidence            478999999999999999999999999999999999999997  677653                   26789888888


Q ss_pred             HHHHcCCCeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      +...   ++|+||||+.||++|++.
T Consensus       221 l~~~---~~~~~vGDs~~Di~~a~~  242 (287)
T 3a1c_A          221 LQAK---EVVAFVGDGINDAPALAQ  242 (287)
T ss_dssp             HTTT---CCEEEEECTTTCHHHHHH
T ss_pred             HhcC---CeEEEEECCHHHHHHHHH
Confidence            7655   589999999999999875

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=99.79  E-value=2.5e-19  Score=176.88  Aligned_cols=61  Identities=11%  Similarity=0.178  Sum_probs=56.9

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccc
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDE   98 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~   98 (259)
                      +++.|+++||++|++++.+-...+.+++++++++|+..++|.++.+++||||||||||.++
T Consensus       335 i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~  395 (1034)
T 3ixz_A          335 MAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNR  395 (1034)
T ss_pred             HHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCe
Confidence            6789999999999999888777789999999999999999999999999999999998764

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=99.78  E-value=1.2e-19  Score=178.63  Aligned_cols=99  Identities=17%  Similarity=0.199  Sum_probs=76.0

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceeccc----------------
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFD----------------  216 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~----------------  216 (259)
                      .++++|+++++++.|+++|++++|+|||+..++..+++++|+....  .. +   .+..++|..                
T Consensus       601 ~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~--~~-i---~~~~~~g~~~~~l~~~~~~~~~~~~  674 (995)
T 3ar4_A          601 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGEN--EE-V---ADRAYTGREFDDLPLAEQREACRRA  674 (995)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTT--CC-C---TTTEEEHHHHHTSCHHHHHHHHHHC
T ss_pred             cCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCC--Cc-c---cceEEEchhhhhCCHHHHHHHHhhC
Confidence            4589999999999999999999999999999999999999996311  00 0   001111110                


Q ss_pred             CCCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          217 ANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       217 ~~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      .......|++|..+++.++++ | +.|+|+|||.||+||++.+
T Consensus       675 ~v~~r~~P~~K~~~v~~l~~~-g-~~v~~~GDG~ND~~alk~A  715 (995)
T 3ar4_A          675 CCFARVEPSHKSKIVEYLQSY-D-EITAMTGDGVNDAPALKKA  715 (995)
T ss_dssp             CEEESCCSSHHHHHHHHHHTT-T-CCEEEEECSGGGHHHHHHS
T ss_pred             cEEEEeCHHHHHHHHHHHHHC-C-CEEEEEcCCchhHHHHHHC
Confidence            011224589999999999988 6 7999999999999999853

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.77  E-value=2.8e-18  Score=137.23  Aligned_cols=160  Identities=26%  Similarity=0.391  Sum_probs=119.1

Q ss_pred             cCEEE-EeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC-HHHHHHHHHhCCCCCCccH
Q 025042           83 ADAVC-FDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQDFLEKRPPRLSPGI  160 (259)
Q Consensus        83 ~k~vv-FD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~p~~  160 (259)
                      ++.++ ||+||||++.+.+..+.+..+. .....+...+..+..++.+........+.+. .+.+.++...  ..++|++
T Consensus         8 mk~ivifDlDGTL~d~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~   84 (201)
T 4ap9_A            8 MKKVAVIDIEGTLTDFEFWREMARITGK-REIEELLEKGLSGEVEWLDSLLKRVGLIRGIDEGTFLRTREK--VNVSPEA   84 (201)
T ss_dssp             GSCEEEEECBTTTBCCCHHHHHHHHHCC-HHHHHHHHHHHHTSSCHHHHHHHHHHHTTTCBHHHHHHGGGG--CCCCHHH
T ss_pred             cceeEEecccCCCcchHHHHHHHHHhCh-HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHHh--CCCChhH
Confidence            45555 9999999998877777777666 4445566666667778877777666665543 3444455444  4789999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042          161 DELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY  240 (259)
Q Consensus       161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~  240 (259)
                      .++++.|+++|++++++|++....++.+ +.+|+.  .+ .+.+.. .++.+.+     +.+.|..|..+++++  .  .
T Consensus        85 ~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~--~~-~~~~~~-~~~~~~~-----~~~~~~~k~~~l~~l--~--~  150 (201)
T 4ap9_A           85 RELVETLREKGFKVVLISGSFEEVLEPF-KELGDE--FM-ANRAIF-EDGKFQG-----IRLRFRDKGEFLKRF--R--D  150 (201)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSE--EE-EEEEEE-ETTEEEE-----EECCSSCHHHHHGGG--T--T
T ss_pred             HHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCch--hh-eeeEEe-eCCceEC-----CcCCccCHHHHHHhc--C--c
Confidence            9999999999999999999999999999 999985  45 444433 2344544     223456799999988  2  2


Q ss_pred             CeEEEEecCcccHHhhhcC
Q 025042          241 KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~v  259 (259)
                      ++++||||+.||++|++.+
T Consensus       151 ~~~i~iGD~~~Di~~~~~a  169 (201)
T 4ap9_A          151 GFILAMGDGYADAKMFERA  169 (201)
T ss_dssp             SCEEEEECTTCCHHHHHHC
T ss_pred             CcEEEEeCCHHHHHHHHhC
Confidence            7999999999999999853

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=99.77  E-value=5.5e-20  Score=181.38  Aligned_cols=61  Identities=11%  Similarity=0.199  Sum_probs=55.8

Q ss_pred             eeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCCCcccccc
Q 025042           38 ARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDE   98 (259)
Q Consensus        38 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~DGTLt~~~   98 (259)
                      +++.|+++||++|++++.+-...+.+++++|+++|+..++|.++.+++||||||||||.++
T Consensus       330 i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~  390 (1028)
T 2zxe_A          330 IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR  390 (1028)
T ss_dssp             HHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSS
T ss_pred             HHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCe
Confidence            5688899999999998887777788999999999999999999999999999999998763

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=99.77  E-value=4e-18  Score=146.35  Aligned_cols=193  Identities=13%  Similarity=0.219  Sum_probs=122.2

Q ss_pred             cccccCCCCCCCHHHHHhc-c--------CcCEEEEeCCCcccccc-------hHHHHHHHhcC-chh----HHHHHHHH
Q 025042           62 SALGRSENTLPSKEVLQLW-R--------TADAVCFDVDSTVCVDE-------GIDELAEFCGA-GKA----VAEWTARA  120 (259)
Q Consensus        62 ~~~~~~g~~v~~~~~~e~~-~--------~~k~vvFD~DGTLt~~~-------~~~~l~~~~~~-~~~----~~~~~~~~  120 (259)
                      ..+.+.++++|.++.+|.+ .        +. .|+||||||||..+       +.+.+.+.... ...    ...+...+
T Consensus        14 p~l~k~~v~ikd~~~~e~~i~~~~kgg~~kL-~VV~DfdgTLT~~~~~g~~~~s~~~i~e~~~~~~~~~~~~~~~l~~~y   92 (297)
T 4fe3_A           14 PEFQKSSVRIKNPTRVEEIICGLIKGGAAKL-QIITDFNMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQY   92 (297)
T ss_dssp             GGGTSTTEECSCHHHHHHHHHHHHHHHHHHE-EEEECCTTTTBCSEETTEECCCHHHHHHTSTTSCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCeEEcChHHHHHHHHHHHhCcchhE-EEEEcCCCCceeeccCCeEeechHHHHHhhhhcCHHHHHHHHHHHHhh
Confidence            4567889999999998863 1        22 38999999998642       22333332221 111    11222221


Q ss_pred             ----cCCCCcHHHHHHHHHh-------hc---CCCHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHH
Q 025042          121 ----MGGSVPFEEALAARLS-------LF---KPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN  186 (259)
Q Consensus       121 ----~~~~~~~~~~~~~~~~-------~~---~~~~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~  186 (259)
                          .....+..+.......       .+   .-......+++.....+++||+.++++.|+++|++++|+||++..+++
T Consensus        93 ~~~e~~~~~~~~ek~~~~~~~~~~~~e~l~~~gl~~~~~~~~v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~  172 (297)
T 4fe3_A           93 YAIEVDPVLTVEEKFPYMVEWYTKSHGLLIEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLE  172 (297)
T ss_dssp             HHHHHCSSSCHHHHHHHHHHHHHHHHHHHHHTTCBGGGHHHHHHTSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHH
T ss_pred             ccccccccccHHHhhhhhHHhhhhhHHHHhhcCccHHHHHHHHHhcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHH
Confidence                1222333332222111       11   112344556677666899999999999999999999999999999999


Q ss_pred             HHHHHcCCCCC--cEeecceeecCCCceecccCCCCCcC----CCChHHHHHHHHHHcCCCeEEEEecCcccHHhhh
Q 025042          187 PIASVLGIPPE--NIFANQLLFKSSGEFLGFDANEPTSR----SGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSI  257 (259)
Q Consensus       187 ~i~~~lgi~~~--~~~~~~l~~~~~~~~~g~~~~~~~~~----~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~  257 (259)
                      ++++++|++..  .++++.+.+++++...+.........    |..|...+..+++. + ++|+|+|||.||+||++
T Consensus       173 ~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~k~~~~~~~~~~-~-~~v~~vGDGiNDa~m~k  247 (297)
T 4fe3_A          173 EVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKD-N-SNIILLGDSQGDLRMAD  247 (297)
T ss_dssp             HHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTCHHHHHHTTT-C-CEEEEEESSGGGGGTTT
T ss_pred             HHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHHHHHHHHHhhcc-C-CEEEEEeCcHHHHHHHh
Confidence            99999998643  47888888876665544432221111    12233444444443 3 68999999999999965

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.73  E-value=8.2e-17  Score=133.31  Aligned_cols=171  Identities=18%  Similarity=0.331  Sum_probs=113.7

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC-HHHHHHHHHhCCCCCCccH
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQDFLEKRPPRLSPGI  160 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~p~~  160 (259)
                      ++++++||+||||++.++...+....+. .....+...+..+..++.+.+...+..+... .+.+.++... ...++||+
T Consensus         5 ~~k~viFD~DGTL~d~ds~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pg~   82 (236)
T 2fea_A            5 RKPFIICDFDGTITMNDNIINIMKTFAP-PEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLE-DAKIREGF   82 (236)
T ss_dssp             CCEEEEECCTTTTBSSCHHHHHHHHHSC-THHHHHHHHHHTTSSCHHHHHHHHHTTSBGGGHHHHHHHHHH-HCCBCTTH
T ss_pred             CCcEEEEeCCCCCCccchHHHHHHHhch-hhHHHHHHHHHhCcCcHHHHHHHHHHhcCCChHHHHHHHHhc-CCCCCccH
Confidence            5689999999999988777777666653 2333444555556567777766665544322 3445555332 25789999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC-CCcEeecceeecCCCceecc-cCCCCC--c--CCCChHHHHHHH
Q 025042          161 DELVKKLKANNKNVYLISGGFRHMINPIASVLGIP-PENIFANQLLFKSSGEFLGF-DANEPT--S--RSGGKAAAVQQI  234 (259)
Q Consensus       161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~-~~~~~~~~l~~~~~~~~~g~-~~~~~~--~--~~~~K~~~v~~l  234 (259)
                      .++|+.|+++|++++++|++....++.+++  |+. .+.+++..... .++.+++. ..+.+.  .  .+..|..+++++
T Consensus        83 ~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~~~v~~~~~~~-~~~~~~~~~~kp~p~~~~~~~~~~K~~~~~~~  159 (236)
T 2fea_A           83 REFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEKDRIYCNHASF-DNDYIHIDWPHSCKGTCSNQCGCCKPSVIHEL  159 (236)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCGGGEEEEEEEC-SSSBCEEECTTCCCTTCCSCCSSCHHHHHHHH
T ss_pred             HHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCCCeEEeeeeEE-cCCceEEecCCCCccccccccCCcHHHHHHHH
Confidence            999999999999999999999988888888  652 23455544322 22333322 112111  1  245688887766


Q ss_pred             HHHcCCCeEEEEecCcccHHhhhcC
Q 025042          235 RKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       235 ~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      ...  .++++||||+.+|+++++.+
T Consensus       160 ~~~--~~~~~~vGDs~~Di~~a~~a  182 (236)
T 2fea_A          160 SEP--NQYIIMIGDSVTDVEAAKLS  182 (236)
T ss_dssp             CCT--TCEEEEEECCGGGHHHHHTC
T ss_pred             hcc--CCeEEEEeCChHHHHHHHhC
Confidence            322  17999999999999998753

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.72  E-value=3.1e-17  Score=138.32  Aligned_cols=81  Identities=30%  Similarity=0.428  Sum_probs=72.0

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      .++|++.++++.|+++|++++++||+....++.+++++|+.  .+|...                   .|.+|...++.+
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~f~~~-------------------~~~~k~~~~k~~  202 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD--DYFAEV-------------------LPHEKAEKVKEV  202 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSC-------------------CGGGHHHHHHHH
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh--hHhHhc-------------------CHHHHHHHHHHH
Confidence            68899999999999999999999999999999999999997  677653                   256899999999


Q ss_pred             HHHcCCCeEEEEecCcccHHhhhcC
Q 025042          235 RKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       235 ~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      .+.+   +++|||||.||++|++.+
T Consensus       203 ~~~~---~~~~vGD~~nDi~~~~~A  224 (280)
T 3skx_A          203 QQKY---VTAMVGDGVNDAPALAQA  224 (280)
T ss_dssp             HTTS---CEEEEECTTTTHHHHHHS
T ss_pred             HhcC---CEEEEeCCchhHHHHHhC
Confidence            8874   789999999999999753

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.72  E-value=8e-17  Score=133.26  Aligned_cols=168  Identities=13%  Similarity=0.141  Sum_probs=102.5

Q ss_pred             HHHhccCcCEEEEeCCCcccccch-----HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhh-c--CCCHHHHH-
Q 025042           76 VLQLWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL-F--KPSLSQVQ-  146 (259)
Q Consensus        76 ~~e~~~~~k~vvFD~DGTLt~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~-  146 (259)
                      .-..|.++|+|+||+||||++.+.     +.......+............  +. .....+...+.. +  ....+.+. 
T Consensus        17 ~~~~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--g~-~~~~~~~~~~~~~~~~~~~~~~~~~   93 (243)
T 3qxg_A           17 GSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHE--GR-TGASTINIVFQRELGKEATQEEIES   93 (243)
T ss_dssp             -----CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTT--TS-CHHHHHHHHHHHHHSSCCCHHHHHH
T ss_pred             CCcccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHh--CC-CHHHHHHHHHHHHhCCCCCHHHHHH
Confidence            333467899999999999988652     222233333322212211111  11 122222221111 1  11222221 


Q ss_pred             ------HHHHh-CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCC
Q 025042          147 ------DFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANE  219 (259)
Q Consensus       147 ------~~~~~-~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~  219 (259)
                            ++... ....++|++.++++.|++.|++++++|+.....+...++. |+.  .+|.....      +.    .+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~--~~f~~d~i------~~----~~  160 (243)
T 3qxg_A           94 IYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP--GMFHKELM------VT----AF  160 (243)
T ss_dssp             HHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST--TTCCGGGE------EC----TT
T ss_pred             HHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH--HhcCcceE------Ee----HH
Confidence                  22222 2467899999999999999999999999988888887877 886  55521111      11    11


Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+++|+..++.+++++|+  ++|+||||+.||+.|++.+
T Consensus       161 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a  202 (243)
T 3qxg_A          161 DVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKA  202 (243)
T ss_dssp             TCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHT
T ss_pred             hCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHC
Confidence            123467899999999999998  8999999999999999753

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.71  E-value=5e-17  Score=133.63  Aligned_cols=92  Identities=17%  Similarity=0.257  Sum_probs=76.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|+++|++++++|++....++.+++.+|+.  .+|...+            ..+....+++|++.++.
T Consensus       103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~--~~f~~~~------------~~~~~~~~kp~~~~~~~  168 (237)
T 4ex6_A          103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLD--TRLTVIA------------GDDSVERGKPHPDMALH  168 (237)
T ss_dssp             GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGG--GTCSEEE------------CTTTSSSCTTSSHHHHH
T ss_pred             CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCch--hheeeEE------------eCCCCCCCCCCHHHHHH
Confidence            568999999999999999999999999999999999999986  4443321            11122346789999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +++++|+  ++|+||||+.||++|++.+
T Consensus       169 ~~~~lg~~~~~~i~vGD~~~Di~~a~~a  196 (237)
T 4ex6_A          169 VARGLGIPPERCVVIGDGVPDAEMGRAA  196 (237)
T ss_dssp             HHHHHTCCGGGEEEEESSHHHHHHHHHT
T ss_pred             HHHHcCCCHHHeEEEcCCHHHHHHHHHC
Confidence            9999998  7999999999999999753

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.71  E-value=4.4e-16  Score=125.67  Aligned_cols=159  Identities=18%  Similarity=0.296  Sum_probs=107.2

Q ss_pred             cCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhc---CCCHHHHHHHHHhCCCCCCcc
Q 025042           83 ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF---KPSLSQVQDFLEKRPPRLSPG  159 (259)
Q Consensus        83 ~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~p~  159 (259)
                      +++++||+||||++ ..+..+....+....     .....+...+.+........+   .-..+.+.++..  ...++||
T Consensus         2 ~k~viFD~DGTL~d-~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g   73 (206)
T 1rku_A            2 MEIACLDLEGVLVP-EIWIAFAEKTGIDAL-----KATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIA--TLKPLEG   73 (206)
T ss_dssp             CEEEEEESBTTTBC-CHHHHHHHHHTCGGG-----GCCTTTCCCHHHHHHHHHHHHHHTTCCHHHHHHHHT--TCCCCTT
T ss_pred             CcEEEEccCCcchh-hHHHHHHHHcCChHH-----HHHhcCcCCHHHHHHHHHHHHHHCCCCHHHHHHHHH--hcCCCcc
Confidence            68999999999999 555555555543321     011112233433333322221   112344444443  3678999


Q ss_pred             HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC
Q 025042          160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA  239 (259)
Q Consensus       160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g  239 (259)
                      +.++++.|+++ ++++++|++....++.+++.+|+.  .+|.+.+....++.+.+...    ..|..|..+++++... .
T Consensus        74 ~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~~~~~~~----p~p~~~~~~l~~l~~~-~  145 (206)
T 1rku_A           74 AVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQL----RQKDPKRQSVIAFKSL-Y  145 (206)
T ss_dssp             HHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCC--CEEEEEEEECTTSCEEEEEC----CSSSHHHHHHHHHHHT-T
T ss_pred             HHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCc--ceecceeEEcCCceEEeeec----CCCchHHHHHHHHHhc-C
Confidence            99999999999 999999999999999999999997  77765555444444333221    2457788888888665 3


Q ss_pred             CCeEEEEecCcccHHhhhc
Q 025042          240 YKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       240 ~~~v~~vGDg~ND~~al~~  258 (259)
                       ++++||||+.||++|++.
T Consensus       146 -~~~~~iGD~~~Di~~a~~  163 (206)
T 1rku_A          146 -YRVIAAGDSYNDTTMLSE  163 (206)
T ss_dssp             -CEEEEEECSSTTHHHHHH
T ss_pred             -CEEEEEeCChhhHHHHHh
Confidence             799999999999999875

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.70  E-value=2.9e-17  Score=133.94  Aligned_cols=92  Identities=14%  Similarity=0.121  Sum_probs=77.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|+++|++++++|++....++.+++.+|+.  .+|...+..            +....+++|+..++.
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~~f~~~~~~------------~~~~~~kp~~~~~~~  150 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLA--FYFDAIVGS------------SLDGKLSTKEDVIRY  150 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCG--GGCSEEEEE------------CTTSSSCSHHHHHHH
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCH--hheeeeecc------------CCCCCCCCCHHHHHH
Confidence            578999999999999999999999999999999999999986  444432211            112346889999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +++++|+  ++++||||+.||++|++.+
T Consensus       151 ~~~~lgi~~~~~i~iGD~~~Di~~a~~a  178 (226)
T 3mc1_A          151 AMESLNIKSDDAIMIGDREYDVIGALKN  178 (226)
T ss_dssp             HHHHHTCCGGGEEEEESSHHHHHHHHTT
T ss_pred             HHHHhCcCcccEEEECCCHHHHHHHHHC
Confidence            9999998  7999999999999999864

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.69  E-value=2.3e-16  Score=128.95  Aligned_cols=92  Identities=17%  Similarity=0.044  Sum_probs=75.9

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|++.|++++++|++....++.+++.+|+.  .+|...+.        +..    ...+++|+..++.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~--~~f~~~~~--------~~~----~~~~kp~~~~~~~  155 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLD--INKINIVT--------RDD----VSYGKPDPDLFLA  155 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC--TTSSCEEC--------GGG----SSCCTTSTHHHHH
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh--hhhheeec--------ccc----CCCCCCChHHHHH
Confidence            578999999999999999999999999999999999999986  43332211        111    1236789999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +++++|+  ++++||||+.||++|++.+
T Consensus       156 ~~~~l~~~~~~~i~iGD~~~Di~~a~~a  183 (233)
T 3s6j_A          156 AAKKIGAPIDECLVIGDAIWDMLAARRC  183 (233)
T ss_dssp             HHHHTTCCGGGEEEEESSHHHHHHHHHT
T ss_pred             HHHHhCCCHHHEEEEeCCHHhHHHHHHC
Confidence            9999998  8999999999999998753

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.69  E-value=1.7e-16  Score=129.04  Aligned_cols=91  Identities=10%  Similarity=0.095  Sum_probs=76.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++++.|+++|++++++|++.+..+....+.+|+.  ++|...+..+            ....++|+++.++.
T Consensus        83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~--~~fd~~~~~~------------~~~~~KP~p~~~~~  148 (216)
T 3kbb_A           83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLE--KYFDVMVFGD------------QVKNGKPDPEIYLL  148 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG--GGCSEEECGG------------GSSSCTTSTHHHHH
T ss_pred             cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCC--cccccccccc------------ccCCCcccHHHHHH
Confidence            468999999999999999999999999999999999999997  5554432111            11236788999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|+  ++|+||||+.+|+.+++.
T Consensus       149 a~~~lg~~p~e~l~VgDs~~Di~aA~~  175 (216)
T 3kbb_A          149 VLERLNVVPEKVVVFEDSKSGVEAAKS  175 (216)
T ss_dssp             HHHHHTCCGGGEEEEECSHHHHHHHHH
T ss_pred             HHHhhCCCccceEEEecCHHHHHHHHH
Confidence            9999998  899999999999999875

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.69  E-value=1e-16  Score=128.94  Aligned_cols=91  Identities=12%  Similarity=0.068  Sum_probs=75.3

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      .++|++.++++.|+++|++++++|+.....++.+++.+|+.  .+|...+..        ..    ...+++|+..++.+
T Consensus        89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~--~~f~~~~~~--------~~----~~~~kp~~~~~~~~  154 (214)
T 3e58_A           89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ--GFFDIVLSG--------EE----FKESKPNPEIYLTA  154 (214)
T ss_dssp             HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG--GGCSEEEEG--------GG----CSSCTTSSHHHHHH
T ss_pred             CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH--hheeeEeec--------cc----ccCCCCChHHHHHH
Confidence            58899999999999999999999999999999999999986  444432211        11    12357789999999


Q ss_pred             HHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          235 RKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       235 ~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ++++|+  +++++|||+.||++|++.+
T Consensus       155 ~~~~~~~~~~~~~iGD~~~Di~~a~~a  181 (214)
T 3e58_A          155 LKQLNVQASRALIIEDSEKGIAAGVAA  181 (214)
T ss_dssp             HHHHTCCGGGEEEEECSHHHHHHHHHT
T ss_pred             HHHcCCChHHeEEEeccHhhHHHHHHC
Confidence            999998  8999999999999999753

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.69  E-value=3.4e-16  Score=130.07  Aligned_cols=169  Identities=17%  Similarity=0.189  Sum_probs=103.7

Q ss_pred             HHHHHhccCcCEEEEeCCCcccccch-----HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhh------cCCCH
Q 025042           74 KEVLQLWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL------FKPSL  142 (259)
Q Consensus        74 ~~~~e~~~~~k~vvFD~DGTLt~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  142 (259)
                      +.....+.++++|+||+||||++.+.     +..+....+...........+..  ......+...+..      .....
T Consensus        14 ~~~~~~~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~   91 (243)
T 2hsz_A           14 NLYFQGMTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIG--NGADVLSQRAVDWACKQAEKELTE   91 (243)
T ss_dssp             -----CCSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCS--SCHHHHHHHHHHHHHHHHTCCCCH
T ss_pred             cceecCCccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhC--chHHHHHHHHhhhhhccccccCCH
Confidence            34556788999999999999998752     12222333332111111222222  1122221111110      01111


Q ss_pred             HH-------HHH-HHHh--CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCce
Q 025042          143 SQ-------VQD-FLEK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEF  212 (259)
Q Consensus       143 ~~-------i~~-~~~~--~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~  212 (259)
                      +.       +.+ |...  ....++|++.++++.|+++|++++++|++....++.+++.+|+.  .+|...+        
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~--~~f~~~~--------  161 (243)
T 2hsz_A           92 DEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID--HLFSEML--------  161 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG--GGCSEEE--------
T ss_pred             HHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch--heEEEEE--------
Confidence            11       111 2221  23568899999999999999999999999999999999999986  4443321        


Q ss_pred             ecccCCCCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          213 LGFDANEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       213 ~g~~~~~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+    +.....++|+..++.+++++|+  ++++||||+.||++|++.
T Consensus       162 ~~----~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~  205 (243)
T 2hsz_A          162 GG----QSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHS  205 (243)
T ss_dssp             CT----TTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred             ec----ccCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHH
Confidence            11    1112346788899999999998  799999999999999874

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.69  E-value=4.1e-16  Score=127.27  Aligned_cols=165  Identities=14%  Similarity=0.142  Sum_probs=106.8

Q ss_pred             ccCcCEEEEeCCCcccccch-HHHHHHHhcCc-hhHHH----------HHHHHcCCCCcHHHHHHH----HHhhcC--CC
Q 025042           80 WRTADAVCFDVDSTVCVDEG-IDELAEFCGAG-KAVAE----------WTARAMGGSVPFEEALAA----RLSLFK--PS  141 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~~-~~~l~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~----~~~~~~--~~  141 (259)
                      |.++++|+||+||||++.+. +......+... .....          ..........++......    ......  ..
T Consensus         2 M~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (230)
T 3um9_A            2 MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD   81 (230)
T ss_dssp             CSSCCEEEECSBTTTBCGGGGHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCC
T ss_pred             CCCceEEEEcCCCCcCcchHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHcCCCCC
Confidence            45789999999999998653 33333333221 11111          111112222233222221    112221  12


Q ss_pred             HHHHHHHHHh-CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCC
Q 025042          142 LSQVQDFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEP  220 (259)
Q Consensus       142 ~~~i~~~~~~-~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~  220 (259)
                      .+....+... ....++|++.++++.|+++|++++++|+.....++.+++.+|+.  .+|...+..        .    .
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~--~~f~~~~~~--------~----~  147 (230)
T 3um9_A           82 ADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT--NSFDHLISV--------D----E  147 (230)
T ss_dssp             HHHHHHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG--GGCSEEEEG--------G----G
T ss_pred             HHHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh--hhcceeEeh--------h----h
Confidence            3333333333 34678999999999999999999999999999999999999986  444332211        1    1


Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ...+++|+..++.+++++|+  +++++|||+.||+.|++.
T Consensus       148 ~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~  187 (230)
T 3um9_A          148 VRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKY  187 (230)
T ss_dssp             TTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHH
T ss_pred             cccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHH
Confidence            12357899999999999998  899999999999999875

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.69  E-value=3.1e-16  Score=129.37  Aligned_cols=92  Identities=13%  Similarity=0.190  Sum_probs=71.9

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEee--cceeecCCCceecccCCCCCcCCCChHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFA--NQLLFKSSGEFLGFDANEPTSRSGGKAAA  230 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~--~~l~~~~~~~~~g~~~~~~~~~~~~K~~~  230 (259)
                      ...++|++.++++.|+++|++++++|+.....+...++. |+.  .+|.  ..+        .+.    ....+++|+..
T Consensus       106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~--~~f~~~~~~--------~~~----~~~~~kp~~~~  170 (247)
T 3dv9_A          106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP--GIFQANLMV--------TAF----DVKYGKPNPEP  170 (247)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST--TTCCGGGEE--------CGG----GCSSCTTSSHH
T ss_pred             cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH--HhcCCCeEE--------ecc----cCCCCCCCCHH
Confidence            367899999999999999999999999988888888888 886  5552  211        111    11346789999


Q ss_pred             HHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          231 VQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       231 v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ++.+++++|+  ++|+||||+.||+.|++.+
T Consensus       171 ~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a  201 (247)
T 3dv9_A          171 YLMALKKGGFKPNEALVIENAPLGVQAGVAA  201 (247)
T ss_dssp             HHHHHHHHTCCGGGEEEEECSHHHHHHHHHT
T ss_pred             HHHHHHHcCCChhheEEEeCCHHHHHHHHHC
Confidence            9999999998  8999999999999998753

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.69  E-value=1.3e-16  Score=130.71  Aligned_cols=161  Identities=17%  Similarity=0.138  Sum_probs=103.4

Q ss_pred             ccCcCEEEEeCCCcccccc-----hH-HHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhc-CCCHHHHHHHHH-h
Q 025042           80 WRTADAVCFDVDSTVCVDE-----GI-DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF-KPSLSQVQDFLE-K  151 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~-----~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~-~  151 (259)
                      |.++++|+||+||||++.+     .+ .......+....  .+ .. .. ..+..+.+....... ........+++. .
T Consensus        22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~--~~-~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (231)
T 3kzx_A           22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNI--DL-DS-IP-NSTIPKYLITLLGKRWKEATILYENSLEKS   96 (231)
T ss_dssp             CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCC--CC-TT-SC-TTTHHHHHHHHHGGGHHHHHHHHHHHHHHC
T ss_pred             cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHH--HH-HH-Hh-CccHHHHHHHHhCchHHHHHHHHHHHHhhh
Confidence            5678999999999998865     22 233333332110  00 00 00 112222222221110 000112233333 1


Q ss_pred             ---CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChH
Q 025042          152 ---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKA  228 (259)
Q Consensus       152 ---~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~  228 (259)
                         ....++|++.++++.|+++|++++++|++....++.+++.+|+.  .+|...+..+            ....+++|+
T Consensus        97 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~f~~i~~~~------------~~~~~Kp~~  162 (231)
T 3kzx_A           97 QKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLT--HYFDSIIGSG------------DTGTIKPSP  162 (231)
T ss_dssp             CSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG--GGCSEEEEET------------SSSCCTTSS
T ss_pred             cccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCch--hheeeEEccc------------ccCCCCCCh
Confidence               24578999999999999999999999999999999999999986  4443322111            112357889


Q ss_pred             HHHHHHHHHcCC--C-eEEEEecCcccHHhhhcC
Q 025042          229 AAVQQIRKAHAY--K-VLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       229 ~~v~~l~~~~g~--~-~v~~vGDg~ND~~al~~v  259 (259)
                      +.++.+++++|+  + +++||||+.||++|++.+
T Consensus       163 ~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~a  196 (231)
T 3kzx_A          163 EPVLAALTNINIEPSKEVFFIGDSISDIQSAIEA  196 (231)
T ss_dssp             HHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHC
Confidence            999999999998  5 899999999999999753

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.68  E-value=4.1e-17  Score=131.06  Aligned_cols=73  Identities=25%  Similarity=0.310  Sum_probs=66.8

Q ss_pred             HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC--
Q 025042          163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY--  240 (259)
Q Consensus       163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~--  240 (259)
                      +|+.|+++|++++++||+....++.+++++|++  ++|..                     ..+|++.++.+++++|+  
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~--~~f~~---------------------~~~K~~~~~~~~~~~g~~~  110 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE--HLFQG---------------------REDKLVVLDKLLAELQLGY  110 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS--EEECS---------------------CSCHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH--HHhcC---------------------cCChHHHHHHHHHHcCCCh
Confidence            899999999999999999999999999999997  66654                     26799999999999987  


Q ss_pred             CeEEEEecCcccHHhhhc
Q 025042          241 KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~  258 (259)
                      ++++||||+.||++|++.
T Consensus       111 ~~~~~vGD~~nDi~~~~~  128 (189)
T 3mn1_A          111 EQVAYLGDDLPDLPVIRR  128 (189)
T ss_dssp             GGEEEEECSGGGHHHHHH
T ss_pred             hHEEEECCCHHHHHHHHH
Confidence            799999999999999975

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=99.68  E-value=2.7e-16  Score=139.41  Aligned_cols=104  Identities=20%  Similarity=0.324  Sum_probs=89.7

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcC----CCCCcEeecceeecCCCceecccCC-CCCcCCCChHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLG----IPPENIFANQLLFKSSGEFLGFDAN-EPTSRSGGKAA  229 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lg----i~~~~~~~~~l~~~~~~~~~g~~~~-~~~~~~~~K~~  229 (259)
                      +++|++.++++.|+++|++++|+||+...+++++++++|    +++++++++.+.++++|.++|.... .+.+.++.|+.
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~  300 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQ  300 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHH
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHH
Confidence            379999999999999999999999999999999999986    4567899999999999999987654 35566778999


Q ss_pred             HHHHHHHH-cCCCeEEEEecCcccHHhhhc
Q 025042          230 AVQQIRKA-HAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       230 ~v~~l~~~-~g~~~v~~vGDg~ND~~al~~  258 (259)
                      .|+++.+. .|...++++|||.||++||+.
T Consensus       301 ~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~  330 (385)
T 4gxt_A          301 TINKLIKNDRNYGPIMVGGDSDGDFAMLKE  330 (385)
T ss_dssp             HHHHHTCCTTEECCSEEEECSGGGHHHHHH
T ss_pred             HHHHHHHhcCCCCcEEEEECCHhHHHHHhc
Confidence            99988643 233679999999999999975

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.68  E-value=8.2e-17  Score=129.92  Aligned_cols=155  Identities=17%  Similarity=0.273  Sum_probs=100.0

Q ss_pred             ccCcCEEEEeCCCcccccc-hHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHh--CCCCC
Q 025042           80 WRTADAVCFDVDSTVCVDE-GIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEK--RPPRL  156 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~  156 (259)
                      +.++|+|+||+||||++.. .+..+....+.... ..+...+..  .+...  ....      ......+...  ....+
T Consensus         3 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~-~~~~~~~~~--~~~~~--~~~~------~~~~~~~~~~~~~~~~~   71 (205)
T 3m9l_A            3 LSEIKHWVFDMDGTLTIAVHDFAAIREALSIPAE-DDILTHLAA--LPADE--SAAK------HAWLLEHERDLAQGSRP   71 (205)
T ss_dssp             GGGCCEEEECTBTTTEEEEECHHHHHHHTTCCTT-SCHHHHHHH--SCHHH--HHHH------HHHHHHTHHHHEEEEEE
T ss_pred             cccCCEEEEeCCCcCcccHHHHHHHHHHhCCCch-HHHHHHHhc--CChHH--HHHH------HHHHHHHHHHHhhcCCC
Confidence            4568999999999999754 44444444443221 000110000  00000  0000      0001111111  12468


Q ss_pred             CccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHH
Q 025042          157 SPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRK  236 (259)
Q Consensus       157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~  236 (259)
                      +|++.++++.|+++|++++++|++....++.+++.+|+.  .+|.....+       +   .+. ..+++|+..++.+++
T Consensus        72 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~--~~f~~~~i~-------~---~~~-~~~kp~~~~~~~~~~  138 (205)
T 3m9l_A           72 APGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLA--DCFAEADVL-------G---RDE-APPKPHPGGLLKLAE  138 (205)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG--GGSCGGGEE-------C---TTT-SCCTTSSHHHHHHHH
T ss_pred             CccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCch--hhcCcceEE-------e---CCC-CCCCCCHHHHHHHHH
Confidence            899999999999999999999999999999999999986  555211111       0   011 236789999999999


Q ss_pred             HcCC--CeEEEEecCcccHHhhhc
Q 025042          237 AHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       237 ~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ++|+  ++++||||+.||++|++.
T Consensus       139 ~~g~~~~~~i~iGD~~~Di~~a~~  162 (205)
T 3m9l_A          139 AWDVSPSRMVMVGDYRFDLDCGRA  162 (205)
T ss_dssp             HTTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HcCCCHHHEEEECCCHHHHHHHHH
Confidence            9998  899999999999999875

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.68  E-value=6e-17  Score=132.44  Aligned_cols=118  Identities=19%  Similarity=0.265  Sum_probs=90.8

Q ss_pred             HHHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCC
Q 025042           74 KEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRP  153 (259)
Q Consensus        74 ~~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  153 (259)
                      .+..++++++++|+||+||||+++...      .....       ... .....                          
T Consensus        40 ~~l~~~~~~ik~viFDlDGTL~Ds~~~------~~~~~-------~~~-~~~~~--------------------------   79 (211)
T 3ij5_A           40 DDVIQRAANIRLLICDVDGVMSDGLIY------MGNQG-------EEL-KAFNV--------------------------   79 (211)
T ss_dssp             HHHHHHHTTCSEEEECCTTTTSSSEEE------EETTS-------CEE-EEEEH--------------------------
T ss_pred             HHHHHHHhCCCEEEEeCCCCEECCHHH------Hhhhh-------HHH-HHhcc--------------------------
Confidence            466788899999999999999997520      00000       000 00000                          


Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                         .++.  +|+.|+++|+++.|+|++....++.+++++|++  .+|..                     .++|++.++.
T Consensus        80 ---~d~~--~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~--~~f~~---------------------~k~K~~~l~~  131 (211)
T 3ij5_A           80 ---RDGY--GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT--HLYQG---------------------QSDKLVAYHE  131 (211)
T ss_dssp             ---HHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC--EEECS---------------------CSSHHHHHHH
T ss_pred             ---chHH--HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--hhhcc---------------------cCChHHHHHH
Confidence               0111  899999999999999999999999999999997  66654                     2689999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +++++|+  ++|+||||+.||++|++.+
T Consensus       132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~a  159 (211)
T 3ij5_A          132 LLATLQCQPEQVAYIGDDLIDWPVMAQV  159 (211)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGHHHHTTS
T ss_pred             HHHHcCcCcceEEEEcCCHHHHHHHHHC
Confidence            9999987  8999999999999999863

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.68  E-value=5.8e-16  Score=126.92  Aligned_cols=91  Identities=14%  Similarity=0.179  Sum_probs=74.6

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|+++|++++++|+.....++.+++.+|+.  .+|...+..        .    ....+++|+..++.
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~~f~~~~~~--------~----~~~~~Kp~~~~~~~  159 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR--DGFDHLLSV--------D----PVQVYKPDNRVYEL  159 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG--GGCSEEEES--------G----GGTCCTTSHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH--hhhheEEEe--------c----ccCCCCCCHHHHHH
Confidence            568899999999999999999999999988899999999986  444332211        0    11235789999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++++||||+.||+.|++.
T Consensus       160 ~~~~~~~~~~~~~~iGD~~~Di~~a~~  186 (232)
T 1zrn_A          160 AEQALGLDRSAILFVASNAWDATGARY  186 (232)
T ss_dssp             HHHHHTSCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHcCCCcccEEEEeCCHHHHHHHHH
Confidence            9999998  799999999999999874

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.67  E-value=7.6e-17  Score=130.23  Aligned_cols=118  Identities=20%  Similarity=0.215  Sum_probs=91.6

Q ss_pred             HHHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCC
Q 025042           74 KEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRP  153 (259)
Q Consensus        74 ~~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  153 (259)
                      .+..++++++++|+||+||||+++...      ...            .+.            ..               
T Consensus        16 ~~~~~~~~~ik~vifD~DGtL~d~~~~------~~~------------~~~------------~~---------------   50 (195)
T 3n07_A           16 PSLLEIAKQIKLLICDVDGVFSDGLIY------MGN------------QGE------------EL---------------   50 (195)
T ss_dssp             HHHHHHHHTCCEEEECSTTTTSCSCCE------ECT------------TSC------------EE---------------
T ss_pred             HHHHHHHhCCCEEEEcCCCCcCCCcEE------Ecc------------Cch------------hh---------------
Confidence            457788999999999999999986421      000            000            00               


Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..+.+.....++.|+++|++++|+||+....++.+++++|++  .+|..                     .++|+..++.
T Consensus        51 ~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~--~~~~~---------------------~k~k~~~~~~  107 (195)
T 3n07_A           51 KTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGIS--LIYQG---------------------QDDKVQAYYD  107 (195)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC--EEECS---------------------CSSHHHHHHH
T ss_pred             heeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc--EEeeC---------------------CCCcHHHHHH
Confidence            011122233689999999999999999999999999999997  66543                     3789999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +++++|+  ++++||||+.||++|++.+
T Consensus       108 ~~~~~~~~~~~~~~vGD~~nDi~~~~~a  135 (195)
T 3n07_A          108 ICQKLAIAPEQTGYIGDDLIDWPVMEKV  135 (195)
T ss_dssp             HHHHHCCCGGGEEEEESSGGGHHHHTTS
T ss_pred             HHHHhCCCHHHEEEEcCCHHHHHHHHHC
Confidence            9999998  7999999999999999863

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.67  E-value=7.5e-16  Score=123.54  Aligned_cols=161  Identities=12%  Similarity=0.120  Sum_probs=104.5

Q ss_pred             CcCEEEEeCCCcccccch----HHHHHHHhcCchh-HHHH----HHHHcCCCCcHHHHHHHHHhhcC--CCHHHHHHHHH
Q 025042           82 TADAVCFDVDSTVCVDEG----IDELAEFCGAGKA-VAEW----TARAMGGSVPFEEALAARLSLFK--PSLSQVQDFLE  150 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~----~~~l~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~  150 (259)
                      ++++|+||+||||++.+.    +....+..+.... ....    ...+..+.....+.+........  ...+.+.+++.
T Consensus         3 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (200)
T 3cnh_A            3 TIKALFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPEDFRAVME   82 (200)
T ss_dssp             CCCEEEECCBTTTBCCSSCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHHHHHHHH
T ss_pred             CceEEEEeCCCeeECCCcchHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            378999999999998652    2223333333221 1111    11223344455544443322221  12233344333


Q ss_pred             hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042          151 KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA  230 (259)
Q Consensus       151 ~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~  230 (259)
                      .. ..++|++.++++.|+++| +++++|++....++.+++.+|+.  .+|...+.        +..    ...++++++.
T Consensus        83 ~~-~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~--~~f~~~~~--------~~~----~~~~Kp~~~~  146 (200)
T 3cnh_A           83 EQ-SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG--EFLLAFFT--------SSA----LGVMKPNPAM  146 (200)
T ss_dssp             HT-CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG--GTCSCEEE--------HHH----HSCCTTCHHH
T ss_pred             hc-CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH--HhcceEEe--------ecc----cCCCCCCHHH
Confidence            32 458999999999999999 99999999999999999999985  44432221        111    1135678889


Q ss_pred             HHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          231 VQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       231 v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ++.+++++|+  ++++||||+.||++|++.
T Consensus       147 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~  176 (200)
T 3cnh_A          147 YRLGLTLAQVRPEEAVMVDDRLQNVQAARA  176 (200)
T ss_dssp             HHHHHHHHTCCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHcCCCHHHeEEeCCCHHHHHHHHH
Confidence            9999999998  799999999999999875

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.67  E-value=6.1e-17  Score=128.59  Aligned_cols=73  Identities=16%  Similarity=0.264  Sum_probs=65.6

Q ss_pred             HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC--
Q 025042          163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY--  240 (259)
Q Consensus       163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~--  240 (259)
                      +|++|+++|++++++|++....++.+++++|++   +|..                     .++|+..++++++++|+  
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~---~~~~---------------------~~~k~~~l~~~~~~~~~~~  102 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP---VLHG---------------------IDRKDLALKQWCEEQGIAP  102 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC---EEES---------------------CSCHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe---eEeC---------------------CCChHHHHHHHHHHcCCCH
Confidence            899999999999999999999999999999994   4433                     37899999999999987  


Q ss_pred             CeEEEEecCcccHHhhhcC
Q 025042          241 KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~v  259 (259)
                      ++++||||+.||++|++.+
T Consensus       103 ~~~~~vGD~~nD~~~~~~a  121 (176)
T 3mmz_A          103 ERVLYVGNDVNDLPCFALV  121 (176)
T ss_dssp             GGEEEEECSGGGHHHHHHS
T ss_pred             HHEEEEcCCHHHHHHHHHC
Confidence            7899999999999999753

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.66  E-value=8.8e-16  Score=125.69  Aligned_cols=91  Identities=13%  Similarity=0.131  Sum_probs=75.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|+++|++++++|+.....++.+++.+|+.  .+|...+..        .    ....+++|+..++.
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~~f~~~~~~--------~----~~~~~kp~~~~~~~  163 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMS--GLFDHVLSV--------D----AVRLYKTAPAAYAL  163 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCT--TTCSEEEEG--------G----GTTCCTTSHHHHTH
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcH--hhcCEEEEe--------c----ccCCCCcCHHHHHH
Confidence            578999999999999999999999999999999999999986  444332211        0    11236789999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++++||||+.||+.|++.
T Consensus       164 ~~~~~~~~~~~~~~vGD~~~Di~~a~~  190 (233)
T 3umb_A          164 APRAFGVPAAQILFVSSNGWDACGATW  190 (233)
T ss_dssp             HHHHHTSCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHhCCCcccEEEEeCCHHHHHHHHH
Confidence            9999998  899999999999999874

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.66  E-value=2.8e-16  Score=128.69  Aligned_cols=161  Identities=14%  Similarity=0.148  Sum_probs=101.9

Q ss_pred             CcCEEEEeCCCcccccchH-----HHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC--HHHHHHHHHh---
Q 025042           82 TADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS--LSQVQDFLEK---  151 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~---  151 (259)
                      ++++|+||+||||++.+..     ..+....+..............  .+..+.+...+......  .+...++...   
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIG--GGVRALLEKVLKDKFREEYVEVFRKHYLENPV   79 (222)
T ss_dssp             EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCS--SCHHHHHHHHHGGGCCTHHHHHHHHHHHHCSC
T ss_pred             CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhC--cCHHHHHHHHhChHHHHHHHHHHHHHHHHhcc
Confidence            4789999999999987531     2222223322100000111111  23333333322211110  1122233322   


Q ss_pred             CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       152 ~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ....++|++.++++.|+++|++++++|++....++.+++.+|+.  .+|...+.        +    +....+++|+..+
T Consensus        80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~--~~f~~i~~--------~----~~~~~~Kp~~~~~  145 (222)
T 2nyv_A           80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS--GYFDLIVG--------G----DTFGEKKPSPTPV  145 (222)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG--GGCSEEEC--------T----TSSCTTCCTTHHH
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH--HHheEEEe--------c----CcCCCCCCChHHH
Confidence            24568999999999999999999999999998899999999986  44443221        1    1112357899999


Q ss_pred             HHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +.+++++|+  ++++||||+.||++|++.
T Consensus       146 ~~~~~~~~~~~~~~~~vGD~~~Di~~a~~  174 (222)
T 2nyv_A          146 LKTLEILGEEPEKALIVGDTDADIEAGKR  174 (222)
T ss_dssp             HHHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHHHhCCCchhEEEECCCHHHHHHHHH
Confidence            999999998  799999999999999874

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.66  E-value=3.2e-16  Score=127.29  Aligned_cols=88  Identities=20%  Similarity=0.238  Sum_probs=74.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++++.|++ |++++++|++.+..++.+++++|+.  .+|...+..         .     ..+++|++.++.
T Consensus        83 ~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~--~~f~~i~~~---------~-----~~~Kp~p~~~~~  145 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIH--HFFDGIYGS---------S-----PEAPHKADVIHQ  145 (210)
T ss_dssp             CEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCG--GGCSEEEEE---------C-----SSCCSHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCch--hheeeeecC---------C-----CCCCCChHHHHH
Confidence            4678999999999999 9999999999888899999999996  555433211         1     135889999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++|+||||+.||+.|++.
T Consensus       146 ~~~~lg~~p~~~~~vgDs~~Di~~a~~  172 (210)
T 2ah5_A          146 ALQTHQLAPEQAIIIGDTKFDMLGARE  172 (210)
T ss_dssp             HHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHcCCCcccEEEECCCHHHHHHHHH
Confidence            9999998  799999999999999874

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.66  E-value=1.3e-15  Score=125.62  Aligned_cols=91  Identities=16%  Similarity=0.087  Sum_probs=75.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|+++|++++++|+.....++.+++.+|+.  .+|...+..        ..    ...+++|+..++.
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~--~~f~~~~~~--------~~----~~~~Kp~~~~~~~  169 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD--RVLDSCLSA--------DD----LKIYKPDPRIYQF  169 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG--GGCSEEEEG--------GG----TTCCTTSHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH--HHcCEEEEc--------cc----cCCCCCCHHHHHH
Confidence            578999999999999999999999999999999999999986  444332211        11    1235789999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++++||||+.||++|++.
T Consensus       170 ~~~~~~~~~~~~~~iGD~~~Di~~a~~  196 (240)
T 2no4_A          170 ACDRLGVNPNEVCFVSSNAWDLGGAGK  196 (240)
T ss_dssp             HHHHHTCCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHcCCCcccEEEEeCCHHHHHHHHH
Confidence            9999998  799999999999999874

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.66  E-value=4.1e-16  Score=130.19  Aligned_cols=162  Identities=17%  Similarity=0.128  Sum_probs=105.0

Q ss_pred             cCcCEEEEeCCCcccccch-----HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC--CCHHH---HHHHHH
Q 025042           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQ---VQDFLE  150 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---i~~~~~  150 (259)
                      .++++|+||+||||++.+.     +.......+...........+..  ....+.+......+.  ...+.   +.+...
T Consensus        26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (259)
T 4eek_A           26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTG--QRFDGVLAYLAQQHDFVPPPDFLDVLETRFN  103 (259)
T ss_dssp             CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTT--CCHHHHHHHHHHHHCCCCCTTHHHHHHHHHH
T ss_pred             cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            4689999999999998652     12222333333222222222221  233333333222221  11111   111111


Q ss_pred             h--CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeec-ceeecCCCceecccCCCCCc-CCCC
Q 025042          151 K--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFAN-QLLFKSSGEFLGFDANEPTS-RSGG  226 (259)
Q Consensus       151 ~--~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~-~l~~~~~~~~~g~~~~~~~~-~~~~  226 (259)
                      .  ....++|++.++++.|+++|++++++|+.....++.+++.+|+.  .+|.. .+.        +    +... .+++
T Consensus       104 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~--~~f~~~i~~--------~----~~~~~~~Kp  169 (259)
T 4eek_A          104 AAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT--ELAGEHIYD--------P----SWVGGRGKP  169 (259)
T ss_dssp             HHHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH--HHHCSCEEC--------G----GGGTTCCTT
T ss_pred             HHhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH--hhccceEEe--------H----hhcCcCCCC
Confidence            1  34678999999999999999999999999999999999999985  44433 211        1    1112 3678


Q ss_pred             hHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          227 KAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       227 K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      |+..++.+++++|+  ++++||||+.||+.|++.
T Consensus       170 ~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~  203 (259)
T 4eek_A          170 HPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLA  203 (259)
T ss_dssp             SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred             ChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH
Confidence            89999999999998  899999999999999875

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.65  E-value=5.2e-16  Score=127.40  Aligned_cols=168  Identities=12%  Similarity=0.071  Sum_probs=107.1

Q ss_pred             HHhcc--CcCEEEEeCCCcccccchHHH--HHHHhcCchhH--------HHHHHHHcCCCCcHHHHHHHHHhhcC--CCH
Q 025042           77 LQLWR--TADAVCFDVDSTVCVDEGIDE--LAEFCGAGKAV--------AEWTARAMGGSVPFEEALAARLSLFK--PSL  142 (259)
Q Consensus        77 ~e~~~--~~k~vvFD~DGTLt~~~~~~~--l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  142 (259)
                      +..|.  ++++|+||+||||++.+....  .....+.....        ...+..+..+.++..+..........  ...
T Consensus        20 ~~sM~~~~ik~viFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   99 (229)
T 4dcc_A           20 FQSMKSKGIKNLLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSD   99 (229)
T ss_dssp             ------CCCCEEEECSBTTTBCBCHHHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCH
T ss_pred             ccccccCCCCEEEEeCCCeEEeCChHHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCH
Confidence            34443  489999999999998663221  12222222110        11233344555666555544433332  344


Q ss_pred             HHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHH------HHcCCCCCcEeecceeecCCCceeccc
Q 025042          143 SQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIA------SVLGIPPENIFANQLLFKSSGEFLGFD  216 (259)
Q Consensus       143 ~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~------~~lgi~~~~~~~~~l~~~~~~~~~g~~  216 (259)
                      +.+.+.+......++|++.++++.|++. ++++++|++.....+.+.      +.+|+.  .+|...+.        +..
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~--~~fd~i~~--------~~~  168 (229)
T 4dcc_A          100 KQIDAAWNSFLVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVE--DYFEKTYL--------SYE  168 (229)
T ss_dssp             HHHHHHHHTTBCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHH--HHCSEEEE--------HHH
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHH--HhCCEEEe--------ecc
Confidence            5555555554446789999999999998 999999999988888666      555654  33332211        111


Q ss_pred             CCCCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          217 ANEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       217 ~~~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                          ...+++++..++.+++++|+  ++|+||||+.||+.+++.+
T Consensus       169 ----~~~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~a  209 (229)
T 4dcc_A          169 ----MKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQEL  209 (229)
T ss_dssp             ----HTCCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHT
T ss_pred             ----cCCCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHc
Confidence                12357788999999999998  8999999999999998753

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.65  E-value=2.3e-16  Score=126.93  Aligned_cols=165  Identities=15%  Similarity=0.049  Sum_probs=100.3

Q ss_pred             ccCcCEEEEeCCCcccccch--HHHHHHHhcCchhHHHHHH---------HHcCCCCcHHHHHHHHHhhcC--CCHHHHH
Q 025042           80 WRTADAVCFDVDSTVCVDEG--IDELAEFCGAGKAVAEWTA---------RAMGGSVPFEEALAARLSLFK--PSLSQVQ  146 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~~--~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~i~  146 (259)
                      +.++++|+||+||||++.+.  ........+.... .....         .+..+..+..+..........  ...+.+.
T Consensus         4 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   82 (206)
T 2b0c_A            4 KEAKMLYIFDLGNVIVDIDFNRVLGAWSDLTRIPL-ASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFS   82 (206)
T ss_dssp             --CCCEEEECCBTTTEEEETHHHHHHHHHHHCCCH-HHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHHH
T ss_pred             cccccEEEEcCCCeeecCcHHHHHHHHHHhcCCCH-HHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence            35789999999999998762  2111122222111 11111         222344444444333222222  2233333


Q ss_pred             HHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH-cCCCCCcEeecceeecCCCceecccCCCCCcCCC
Q 025042          147 DFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV-LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG  225 (259)
Q Consensus       147 ~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~-lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~  225 (259)
                      +.+......++|++.++++.|+++|++++++|+......+.+++. +|+.  .+|...+        .+...    ..++
T Consensus        83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~--~~f~~~~--------~~~~~----~~~K  148 (206)
T 2b0c_A           83 HGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR--DAADHIY--------LSQDL----GMRK  148 (206)
T ss_dssp             HHHHTCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH--HHCSEEE--------EHHHH----TCCT
T ss_pred             HHHHHHhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh--hheeeEE--------Eeccc----CCCC
Confidence            333333356889999999999999999999999888776665555 5553  2222211        11111    1246


Q ss_pred             ChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          226 GKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       226 ~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ++++.++.+++++|+  ++++||||+.||++|++.+
T Consensus       149 p~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~a  184 (206)
T 2b0c_A          149 PEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQL  184 (206)
T ss_dssp             TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHc
Confidence            778899999999998  7999999999999998753

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.65  E-value=3.1e-16  Score=126.72  Aligned_cols=162  Identities=12%  Similarity=0.102  Sum_probs=101.6

Q ss_pred             cCcCEEEEeCCCcccccchHH--HHHHHhcCchhHHHHH---------HHHcCCCCcHHHHHHHHHhhcC--CCHHHHHH
Q 025042           81 RTADAVCFDVDSTVCVDEGID--ELAEFCGAGKAVAEWT---------ARAMGGSVPFEEALAARLSLFK--PSLSQVQD  147 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~~--~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~  147 (259)
                      .|+++|+||+||||++.+...  ......+.... ....         ..+..+..+..+........+.  ...+.+.+
T Consensus         3 ~m~k~iiFDlDGTL~d~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (211)
T 2i6x_A            3 AMIRNIVFDLGGVLIHLNREESIRRFKAIGVADI-EEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYD   81 (211)
T ss_dssp             CCCSEEEECSBTTTEEECHHHHHHHHHHTTCTTH-HHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred             ccceEEEEeCCCeeEecchHHHHHHHHHhCCchH-HHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence            468999999999999876432  22222222211 1111         1111233334333333222222  22333333


Q ss_pred             HHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH------cCCCCCcEeecceeecCCCceecccCCCCC
Q 025042          148 FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV------LGIPPENIFANQLLFKSSGEFLGFDANEPT  221 (259)
Q Consensus       148 ~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~------lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~  221 (259)
                      ........++|++.++++.|++ |++++++|+.....++.+++.      +|+.  .+|...+        .+..    .
T Consensus        82 ~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~--~~f~~~~--------~~~~----~  146 (211)
T 2i6x_A           82 ALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLD--SFFDKVY--------ASCQ----M  146 (211)
T ss_dssp             HHGGGEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGG--GGSSEEE--------EHHH----H
T ss_pred             HHHHhhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHH--HHcCeEE--------eecc----c
Confidence            3333224678999999999999 999999999988888888887      6775  3333221        1111    1


Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..++++++.++.+++++|+  ++++||||+.||++|++.
T Consensus       147 ~~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~  185 (211)
T 2i6x_A          147 GKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAER  185 (211)
T ss_dssp             TCCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHH
Confidence            1356788999999999998  899999999999999875

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.65  E-value=2.8e-15  Score=122.76  Aligned_cols=165  Identities=16%  Similarity=0.172  Sum_probs=106.6

Q ss_pred             ccCcCEEEEeCCCcccccchH-----HHHHHHhcCchhH----------HHHHHHHcCCCCcHHHHHHHHHh----hcC-
Q 025042           80 WRTADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAV----------AEWTARAMGGSVPFEEALAARLS----LFK-  139 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~~~-----~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~----~~~-  139 (259)
                      |.++|+|+||+||||++.+..     .......+.....          ......+..+..+..+.....+.    ... 
T Consensus         4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (238)
T 3ed5_A            4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGY   83 (238)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTC
T ss_pred             cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCC
Confidence            456899999999999876421     1222333322111          11122233445555444332222    111 


Q ss_pred             -CCHHHHHHHHHh---CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecc
Q 025042          140 -PSLSQVQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGF  215 (259)
Q Consensus       140 -~~~~~i~~~~~~---~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~  215 (259)
                       .....+.+....   ....++|++.++++.|++. ++++++|+.....++..++.+|+.  .+|...+..        .
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~--~~f~~~~~~--------~  152 (238)
T 3ed5_A           84 EADGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLF--PFFKDIFVS--------E  152 (238)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCG--GGCSEEEEG--------G
T ss_pred             CCcHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChH--hhhheEEEe--------c
Confidence             122233222221   2357899999999999999 999999999998899999999986  444332211        1


Q ss_pred             cCCCCCcCCCChHHHHHHHHHHcC-C--CeEEEEecCc-ccHHhhhcC
Q 025042          216 DANEPTSRSGGKAAAVQQIRKAHA-Y--KVLAMIGDGA-TDLEVSIFI  259 (259)
Q Consensus       216 ~~~~~~~~~~~K~~~v~~l~~~~g-~--~~v~~vGDg~-ND~~al~~v  259 (259)
                      .    ...+++|+..++.+++++| +  ++++||||+. ||+.|++.+
T Consensus       153 ~----~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~a  196 (238)
T 3ed5_A          153 D----TGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLA  196 (238)
T ss_dssp             G----TTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred             c----cCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHC
Confidence            1    1236789999999999999 7  8999999998 999999753

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.65  E-value=1.8e-15  Score=123.25  Aligned_cols=87  Identities=18%  Similarity=0.216  Sum_probs=74.6

Q ss_pred             CCCCCccHHHHHHHHHHCC-CcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          153 PPRLSPGIDELVKKLKANN-KNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g-~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ...++|++.++++.|+++| ++++++|++....++.+++.+|+.  .+|...+                 ..+++|+..+
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~--~~f~~~~-----------------~~~kpk~~~~  163 (234)
T 3ddh_A          103 PIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLS--PYFDHIE-----------------VMSDKTEKEY  163 (234)
T ss_dssp             CCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCG--GGCSEEE-----------------EESCCSHHHH
T ss_pred             cCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcH--hhhheee-----------------ecCCCCHHHH
Confidence            3578999999999999999 999999998888889999999986  4554432                 1257899999


Q ss_pred             HHHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          232 QQIRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      +.+++++|+  +++++|||+. ||+.|++.
T Consensus       164 ~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~  193 (234)
T 3ddh_A          164 LRLLSILQIAPSELLMVGNSFKSDIQPVLS  193 (234)
T ss_dssp             HHHHHHHTCCGGGEEEEESCCCCCCHHHHH
T ss_pred             HHHHHHhCCCcceEEEECCCcHHHhHHHHH
Confidence            999999998  8999999997 99999874

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.65  E-value=1.4e-15  Score=128.73  Aligned_cols=95  Identities=15%  Similarity=0.236  Sum_probs=77.0

Q ss_pred             CCCCccHHHHHHHHHHCCC--cEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          154 PRLSPGIDELVKKLKANNK--NVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~--~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ..++|++.++++.|+++|+  +++++|++....++.+++.+|+.  .+|...+..        .........+++|+..+
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~--~~fd~v~~~--------~~~~~~~~~~Kp~~~~~  210 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIA--DLFDGLTYC--------DYSRTDTLVCKPHVKAF  210 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCT--TSCSEEECC--------CCSSCSSCCCTTSHHHH
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcc--cccceEEEe--------ccCCCcccCCCcCHHHH
Confidence            5689999999999999999  99999999999999999999996  555443211        11112223468899999


Q ss_pred             HHHHHHcCC---CeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAHAY---KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~---~~v~~vGDg~ND~~al~~  258 (259)
                      +.+++++|+   ++|+||||+.||+.|++.
T Consensus       211 ~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~  240 (282)
T 3nuq_A          211 EKAMKESGLARYENAYFIDDSGKNIETGIK  240 (282)
T ss_dssp             HHHHHHHTCCCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHHHcCCCCcccEEEEcCCHHHHHHHHH
Confidence            999999997   589999999999999875

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.65  E-value=1.6e-15  Score=125.56  Aligned_cols=92  Identities=17%  Similarity=0.152  Sum_probs=73.8

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++++.|+++|++++++|++....++.+++.+|+.   +|...+.        +    +....+++|++.+.
T Consensus       108 ~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~---~f~~~~~--------~----~~~~~~Kp~p~~~~  172 (240)
T 2hi0_A          108 KTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG---SFDFALG--------E----KSGIRRKPAPDMTS  172 (240)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT---TCSEEEE--------E----CTTSCCTTSSHHHH
T ss_pred             cCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc---ceeEEEe--------c----CCCCCCCCCHHHHH
Confidence            3467899999999999999999999999888889999998873   2221111        0    01134688999999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      .+++++|+  ++|+||||+.||+.|++.+
T Consensus       173 ~~~~~l~~~~~~~~~vGDs~~Di~~a~~a  201 (240)
T 2hi0_A          173 ECVKVLGVPRDKCVYIGDSEIDIQTARNS  201 (240)
T ss_dssp             HHHHHHTCCGGGEEEEESSHHHHHHHHHT
T ss_pred             HHHHHcCCCHHHeEEEcCCHHHHHHHHHC
Confidence            99999998  8999999999999998753

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.65  E-value=3.7e-15  Score=121.67  Aligned_cols=91  Identities=10%  Similarity=0.108  Sum_probs=73.1

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCc---cccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGF---RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~---~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      .++|++.++++.|+++|++++++|++.   ....+..++.+|+.  .+|...+..        ..    ...+++|++.+
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~--~~f~~~~~~--------~~----~~~~kp~~~~~  164 (235)
T 2om6_A           99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM--EFIDKTFFA--------DE----VLSYKPRKEMF  164 (235)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG--GGCSEEEEH--------HH----HTCCTTCHHHH
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH--HHhhhheec--------cc----cCCCCCCHHHH
Confidence            469999999999999999999999998   77888888999986  444332211        01    11356789999


Q ss_pred             HHHHHHcCC--CeEEEEecCc-ccHHhhhcC
Q 025042          232 QQIRKAHAY--KVLAMIGDGA-TDLEVSIFI  259 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~-ND~~al~~v  259 (259)
                      +.+++++|+  +++++|||+. ||++|++.+
T Consensus       165 ~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~a  195 (235)
T 2om6_A          165 EKVLNSFEVKPEESLHIGDTYAEDYQGARKV  195 (235)
T ss_dssp             HHHHHHTTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred             HHHHHHcCCCccceEEECCChHHHHHHHHHC
Confidence            999999998  8999999999 999999753

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.64  E-value=3.2e-15  Score=122.45  Aligned_cols=88  Identities=19%  Similarity=0.137  Sum_probs=66.8

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR  235 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~  235 (259)
                      ++|++.++++.|+++|++++++|++..  ++.+++.+|+.  .+|...+.            .+....+++|+..++.++
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~--~~f~~i~~------------~~~~~~~Kp~~~~~~~~~  156 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAII--DDFHAIVD------------PTTLAKGKPDPDIFLTAA  156 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCT--TTCSEECC------------C---------CCHHHHHH
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcH--hhcCEEee------------HhhCCCCCCChHHHHHHH
Confidence            799999999999999999999998744  78889999986  44433221            111223577888999999


Q ss_pred             HHcCC--CeEEEEecCcccHHhhhcC
Q 025042          236 KAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       236 ~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +++|+  ++++||||+.||+.|++.+
T Consensus       157 ~~lgi~~~~~i~vGDs~~Di~~a~~a  182 (233)
T 3nas_A          157 AMLDVSPADCAAIEDAEAGISAIKSA  182 (233)
T ss_dssp             HHHTSCGGGEEEEECSHHHHHHHHHT
T ss_pred             HHcCCCHHHEEEEeCCHHHHHHHHHc
Confidence            99998  8999999999999999753

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.64  E-value=4e-15  Score=118.07  Aligned_cols=90  Identities=16%  Similarity=0.202  Sum_probs=71.7

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      .++|++.++++.|+++|++++++|++. ..++.+++.+|+.  ..|...+.        +..    ...+++|+..++.+
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~--~~f~~~~~--------~~~----~~~~kp~~~~~~~~  146 (190)
T 2fi1_A           82 ILFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIA--AYFTEVVT--------SSS----GFKRKPNPESMLYL  146 (190)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCG--GGEEEEEC--------GGG----CCCCTTSCHHHHHH
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCH--hheeeeee--------ccc----cCCCCCCHHHHHHH
Confidence            489999999999999999999999875 4677888899986  44543221        111    12357889999999


Q ss_pred             HHHcCCCeEEEEecCcccHHhhhcC
Q 025042          235 RKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       235 ~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      ++++|++++++|||+.||++|++.+
T Consensus       147 ~~~~~~~~~~~iGD~~~Di~~a~~a  171 (190)
T 2fi1_A          147 REKYQISSGLVIGDRPIDIEAGQAA  171 (190)
T ss_dssp             HHHTTCSSEEEEESSHHHHHHHHHT
T ss_pred             HHHcCCCeEEEEcCCHHHHHHHHHc
Confidence            9999877899999999999999753

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.63  E-value=1.3e-15  Score=121.49  Aligned_cols=90  Identities=17%  Similarity=0.162  Sum_probs=72.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.++++|++++++|++.....+ .++.+++.  .+|...+..+        .    ...++++++.++.
T Consensus        84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~--~~f~~~~~~~--------~----~~~~Kp~~~~~~~  148 (207)
T 2go7_A           84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVE--SYFTEILTSQ--------S----GFVRKPSPEAATY  148 (207)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCG--GGEEEEECGG--------G----CCCCTTSSHHHHH
T ss_pred             ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCch--hheeeEEecC--------c----CCCCCCCcHHHHH
Confidence            467899999999999999999999999988888 88888886  4454322110        0    1124567899999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  +++++|||+.||++|++.
T Consensus       149 ~~~~~~i~~~~~~~iGD~~nDi~~~~~  175 (207)
T 2go7_A          149 LLDKYQLNSDNTYYIGDRTLDVEFAQN  175 (207)
T ss_dssp             HHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHhCCCcccEEEECCCHHHHHHHHH
Confidence            9999998  799999999999999875

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.63  E-value=7.3e-16  Score=122.68  Aligned_cols=80  Identities=23%  Similarity=0.182  Sum_probs=70.3

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR  235 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~  235 (259)
                      +.+...++|+.|+++|++++++||+....++.+++++|++  .+|..                     .++|+..+++++
T Consensus        36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~--~~~~~---------------------~k~k~~~~~~~~   92 (180)
T 1k1e_A           36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLG---------------------KLEKETACFDLM   92 (180)
T ss_dssp             EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEES---------------------CSCHHHHHHHHH
T ss_pred             eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc--eeecC---------------------CCCcHHHHHHHH
Confidence            3455668999999999999999999999999999999997  55532                     378999999999


Q ss_pred             HHcCC--CeEEEEecCcccHHhhhc
Q 025042          236 KAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       236 ~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++|+  ++++||||+.||++|++.
T Consensus        93 ~~~~~~~~~~~~vGD~~~Di~~~~~  117 (180)
T 1k1e_A           93 KQAGVTAEQTAYIGDDSVDLPAFAA  117 (180)
T ss_dssp             HHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred             HHcCCCHHHEEEECCCHHHHHHHHH
Confidence            99888  799999999999999975

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.62  E-value=5.2e-15  Score=123.30  Aligned_cols=90  Identities=9%  Similarity=0.094  Sum_probs=73.5

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++++.|+  |++++++|+.....++.+++.+|+.  .+|...+..        ..    ...+++|+..++
T Consensus        91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~--~~f~~~~~~--------~~----~~~~Kp~~~~~~  154 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT--DSFDAVISV--------DA----KRVFKPHPDSYA  154 (253)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG--GGCSEEEEG--------GG----GTCCTTSHHHHH
T ss_pred             cCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch--hhccEEEEc--------cc----cCCCCCCHHHHH
Confidence            3578999999999999  9999999999999999999999986  444332211        11    123678999999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+++++|+  ++++||||+.||++|++.
T Consensus       155 ~~~~~~~~~~~~~~~vGD~~~Di~~a~~  182 (253)
T 1qq5_A          155 LVEEVLGVTPAEVLFVSSNGFDVGGAKN  182 (253)
T ss_dssp             HHHHHHCCCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHHcCCCHHHEEEEeCChhhHHHHHH
Confidence            99999998  799999999999999874

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.62  E-value=9.9e-15  Score=119.52  Aligned_cols=92  Identities=21%  Similarity=0.256  Sum_probs=74.8

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++++.|+ .|++++++|++.....+.+++.+|+.  .+|...+..        .    ....+++|+..++
T Consensus       105 ~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~--~~f~~~~~~--------~----~~~~~kp~~~~~~  169 (240)
T 3qnm_A          105 KSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVD--RYFKKIILS--------E----DLGVLKPRPEIFH  169 (240)
T ss_dssp             CCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCG--GGCSEEEEG--------G----GTTCCTTSHHHHH
T ss_pred             cCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChH--hhceeEEEe--------c----cCCCCCCCHHHHH
Confidence            3578999999999999 99999999999888899999999986  444332211        1    1123678999999


Q ss_pred             HHHHHcCC--CeEEEEecCc-ccHHhhhcC
Q 025042          233 QIRKAHAY--KVLAMIGDGA-TDLEVSIFI  259 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~-ND~~al~~v  259 (259)
                      .+++++|+  +++++|||+. ||+.|++.+
T Consensus       170 ~~~~~lgi~~~~~~~iGD~~~~Di~~a~~a  199 (240)
T 3qnm_A          170 FALSATQSELRESLMIGDSWEADITGAHGV  199 (240)
T ss_dssp             HHHHHTTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred             HHHHHcCCCcccEEEECCCchHhHHHHHHc
Confidence            99999998  8999999995 999999753

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.62  E-value=2e-15  Score=124.45  Aligned_cols=91  Identities=14%  Similarity=0.124  Sum_probs=75.7

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|++.|++++++|++....++.+++.+|+.  .+|...+..            +....+++|+..++.
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~--~~f~~~~~~------------~~~~~~kp~~~~~~~  174 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDID--RYFKYIAGS------------NLDGTRVNKNEVIQY  174 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG--GGCSEEEEE------------CTTSCCCCHHHHHHH
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcH--hhEEEEEec------------cccCCCCCCHHHHHH
Confidence            578999999999999999999999999999999999999986  444432211            112346789999999


Q ss_pred             HHHHcCC---CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY---KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~---~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+   +++++|||+.||++|++.
T Consensus       175 ~~~~~g~~~~~~~i~vGD~~~Di~~a~~  202 (240)
T 3sd7_A          175 VLDLCNVKDKDKVIMVGDRKYDIIGAKK  202 (240)
T ss_dssp             HHHHHTCCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHcCCCCCCcEEEECCCHHHHHHHHH
Confidence            9999987   489999999999999874

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.62  E-value=1.3e-14  Score=117.66  Aligned_cols=92  Identities=17%  Similarity=0.127  Sum_probs=74.4

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.+++.|++++++|++....++.+++.+|+.  .+|...+..            +....+++|+..++.
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~--~~~~~~~~~------------~~~~~~kp~~~~~~~  158 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR--DSFDALASA------------EKLPYSKPHPQVYLD  158 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG--GGCSEEEEC------------TTSSCCTTSTHHHHH
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcH--hhCcEEEec------------cccCCCCCChHHHHH
Confidence            568899999999999999999999999888888899999986  444332211            111234677999999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +++++|+  +++++|||+.||++|++.+
T Consensus       159 ~~~~~~i~~~~~i~iGD~~nDi~~a~~a  186 (226)
T 1te2_A          159 CAAKLGVDPLTCVALEDSVNGMIASKAA  186 (226)
T ss_dssp             HHHHHTSCGGGEEEEESSHHHHHHHHHT
T ss_pred             HHHHcCCCHHHeEEEeCCHHHHHHHHHc
Confidence            9999998  7999999999999999853

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.62  E-value=2.4e-15  Score=124.27  Aligned_cols=92  Identities=16%  Similarity=0.147  Sum_probs=74.9

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|+++|++++++|++....++.+++.+|+.  .+|...+.        +..    ...+++|+..++.
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~~f~~~~~--------~~~----~~~~Kp~~~~~~~  158 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD--DFFEHVII--------SDF----EGVKKPHPKIFKK  158 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG--GGCSEEEE--------GGG----GTCCTTCHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH--hhccEEEE--------eCC----CCCCCCCHHHHHH
Confidence            468899999999999999999999999988889999999986  44433221        111    1235778899999


Q ss_pred             HHHHcCC--CeEEEEecCc-ccHHhhhcC
Q 025042          234 IRKAHAY--KVLAMIGDGA-TDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~-ND~~al~~v  259 (259)
                      +++++|+  ++++||||+. ||++|++.+
T Consensus       159 ~~~~~g~~~~~~i~iGD~~~~Di~~a~~a  187 (241)
T 2hoq_A          159 ALKAFNVKPEEALMVGDRLYSDIYGAKRV  187 (241)
T ss_dssp             HHHHHTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred             HHHHcCCCcccEEEECCCchHhHHHHHHC
Confidence            9999998  7999999998 999998753

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.61  E-value=5.1e-15  Score=119.89  Aligned_cols=89  Identities=15%  Similarity=0.106  Sum_probs=70.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.+++.|++++++|++  ...+.+++.+|+.  .+|...+.            .+....+++|++.++.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~--~~f~~~~~------------~~~~~~~Kp~~~~~~~  153 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLT--GYFDAIAD------------PAEVAASKPAPDIFIA  153 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCG--GGCSEECC------------TTTSSSCTTSSHHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChH--HHcceEec------------cccCCCCCCChHHHHH
Confidence            467899999999999999999999988  5667788888885  44432211            1112245678889999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++|++|||+.||++|++.
T Consensus       154 ~~~~lgi~~~~~i~iGD~~nDi~~a~~  180 (221)
T 2wf7_A          154 AAHAVGVAPSESIGLEDSQAGIQAIKD  180 (221)
T ss_dssp             HHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHcCCChhHeEEEeCCHHHHHHHHH
Confidence            9999998  899999999999999975

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.61  E-value=8.4e-15  Score=120.98  Aligned_cols=90  Identities=16%  Similarity=0.100  Sum_probs=73.1

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++++.|++. ++++++|++....++.+++.+|+..+.++...                .....++|+..++
T Consensus       114 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~~~~~~~----------------~~~~~kp~~~~~~  176 (254)
T 3umg_A          114 VLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWDVIIGSD----------------INRKYKPDPQAYL  176 (254)
T ss_dssp             SCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCSCCCCHH----------------HHTCCTTSHHHHH
T ss_pred             hCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCeeEEEEcC----------------cCCCCCCCHHHHH
Confidence            357899999999999986 89999999999999999999988422222211                0123578999999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      .+++++|+  +++++|||+.||+.|++.+
T Consensus       177 ~~~~~lgi~~~~~~~iGD~~~Di~~a~~a  205 (254)
T 3umg_A          177 RTAQVLGLHPGEVMLAAAHNGDLEAAHAT  205 (254)
T ss_dssp             HHHHHTTCCGGGEEEEESCHHHHHHHHHT
T ss_pred             HHHHHcCCChHHEEEEeCChHhHHHHHHC
Confidence            99999998  8999999999999999753

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.61  E-value=2.5e-15  Score=124.78  Aligned_cols=165  Identities=15%  Similarity=0.163  Sum_probs=97.6

Q ss_pred             ccCcCEEEEeCCCcccccch-----HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC--CCHHHH----HHH
Q 025042           80 WRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQV----QDF  148 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i----~~~  148 (259)
                      +.++|+|+||+||||++.+.     +....+..+....... ...+..  ....+........+.  ...+.+    .+.
T Consensus        27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (250)
T 3l5k_A           27 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDV-KSLVMG--KKALEAAQIIIDVLQLPMSKEELVEESQTK  103 (250)
T ss_dssp             CCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHH-HHHHTT--CCHHHHHHHHHHHHTCSSCHHHHHHHHHHH
T ss_pred             ccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHH-HHHhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence            35689999999999988642     2222233332211111 111211  122222222222221  122221    111


Q ss_pred             HHh--CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH-cCCCCCcEeecceeecCCCceecccCCCCCcCCC
Q 025042          149 LEK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV-LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG  225 (259)
Q Consensus       149 ~~~--~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~-lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~  225 (259)
                      ...  ....++|++.++++.|+++|++++++|++....+...+.. +|+.  .+|...+        .+.  ......++
T Consensus       104 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~--~~f~~~~--------~~~--~~~~~~~K  171 (250)
T 3l5k_A          104 LKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFF--SLFSHIV--------LGD--DPEVQHGK  171 (250)
T ss_dssp             HHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHH--TTSSCEE--------CTT--CTTCCSCT
T ss_pred             HHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHH--hheeeEE--------ecc--hhhccCCC
Confidence            111  1357899999999999999999999999887666654433 4543  2232211        110  00223467


Q ss_pred             ChHHHHHHHHHHcCC----CeEEEEecCcccHHhhhcC
Q 025042          226 GKAAAVQQIRKAHAY----KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       226 ~K~~~v~~l~~~~g~----~~v~~vGDg~ND~~al~~v  259 (259)
                      +|++.++.+++++|+    ++++||||+.||+.|++.+
T Consensus       172 p~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~a  209 (250)
T 3l5k_A          172 PDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAA  209 (250)
T ss_dssp             TSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHT
T ss_pred             CChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHc
Confidence            899999999999986    6899999999999999853

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.60  E-value=6e-16  Score=120.94  Aligned_cols=74  Identities=16%  Similarity=0.184  Sum_probs=66.9

Q ss_pred             HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC--
Q 025042          163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY--  240 (259)
Q Consensus       163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~--  240 (259)
                      +++.|+++|++++++||+....++.+++++|++  .+|..                     .++|+..++.+++++|+  
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~--~~~~~---------------------~kpk~~~~~~~~~~~~~~~   95 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD--YLFQG---------------------VVDKLSAAEELCNELGINL   95 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS--EEECS---------------------CSCHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC--Eeecc---------------------cCChHHHHHHHHHHcCCCH
Confidence            899999999999999999999999999999997  55554                     37899999999999987  


Q ss_pred             CeEEEEecCcccHHhhhcC
Q 025042          241 KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~v  259 (259)
                      ++++||||+.||++|++.+
T Consensus        96 ~~~~~vGD~~~Di~~~~~a  114 (164)
T 3e8m_A           96 EQVAYIGDDLNDAKLLKRV  114 (164)
T ss_dssp             GGEEEECCSGGGHHHHTTS
T ss_pred             HHEEEECCCHHHHHHHHHC
Confidence            7999999999999999753

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.60  E-value=5e-15  Score=119.97  Aligned_cols=91  Identities=14%  Similarity=0.046  Sum_probs=73.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..+.|++.++++.+++.|++++++|++.....+..++.+|+.  .+|...+..        .    ....+++|+..++.
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~--~~~~~~~~~--------~----~~~~~k~~~~~~~~  153 (225)
T 3d6j_A           88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD--DWFDIIIGG--------E----DVTHHKPDPEGLLL  153 (225)
T ss_dssp             CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT--TCCSEEECG--------G----GCSSCTTSTHHHHH
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch--hheeeeeeh--------h----hcCCCCCChHHHHH
Confidence            457899999999999999999999999888888999999886  444322111        0    11235678899999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  +++++|||+.||++|++.
T Consensus       154 ~~~~~~~~~~~~i~iGD~~nDi~~~~~  180 (225)
T 3d6j_A          154 AIDRLKACPEEVLYIGDSTVDAGTAAA  180 (225)
T ss_dssp             HHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHhCCChHHeEEEcCCHHHHHHHHH
Confidence            9999998  799999999999999875

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.60  E-value=3.7e-16  Score=126.19  Aligned_cols=90  Identities=14%  Similarity=0.136  Sum_probs=72.6

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|+++ ++++++|++....++.+++.+|+.  .+|...+..        ...    ..++++++.++.
T Consensus        82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~--~~f~~~~~~--------~~~----~~~KP~~~~~~~  146 (209)
T 2hdo_A           82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFM--MRMAVTISA--------DDT----PKRKPDPLPLLT  146 (209)
T ss_dssp             CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGG--GGEEEEECG--------GGS----SCCTTSSHHHHH
T ss_pred             CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChH--hhccEEEec--------CcC----CCCCCCcHHHHH
Confidence            56899999999999999 999999999988899999999986  555432211        111    124556899999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|+  ++++||||+.||++|++.
T Consensus       147 ~~~~~~~~~~~~i~vGD~~~Di~~a~~  173 (209)
T 2hdo_A          147 ALEKVNVAPQNALFIGDSVSDEQTAQA  173 (209)
T ss_dssp             HHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHcCCCcccEEEECCChhhHHHHHH
Confidence            9999998  899999999999999874

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.60  E-value=5.7e-15  Score=120.77  Aligned_cols=93  Identities=20%  Similarity=0.307  Sum_probs=73.5

Q ss_pred             CCCCccHHHHHHHHHHC-CCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          154 PRLSPGIDELVKKLKAN-NKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~-g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ..++|++.++++.|+++ |++++++|++....++.+++.+|+.  .+|....        .+.   +....++++...++
T Consensus        92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~~f~~~~--------~~~---~~~~~~k~~~~~~~  158 (234)
T 2hcf_A           92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID--HYFPFGA--------FAD---DALDRNELPHIALE  158 (234)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS--TTCSCEE--------CTT---TCSSGGGHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch--hhcCcce--------ecC---CCcCccchHHHHHH
Confidence            46789999999999999 9999999999998999999999986  4444211        111   11112446778899


Q ss_pred             HHHHHcC--C--CeEEEEecCcccHHhhhcC
Q 025042          233 QIRKAHA--Y--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       233 ~l~~~~g--~--~~v~~vGDg~ND~~al~~v  259 (259)
                      .+++++|  +  ++|+||||+.||++|++.+
T Consensus       159 ~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~a  189 (234)
T 2hcf_A          159 RARRMTGANYSPSQIVIIGDTEHDIRCAREL  189 (234)
T ss_dssp             HHHHHHCCCCCGGGEEEEESSHHHHHHHHTT
T ss_pred             HHHHHhCCCCCcccEEEECCCHHHHHHHHHC
Confidence            9999988  6  8999999999999999863

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.60  E-value=2.5e-15  Score=126.00  Aligned_cols=92  Identities=16%  Similarity=0.094  Sum_probs=73.9

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcE-eecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENI-FANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~-~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ..++|++.++++.|++.|++++++|++....++.+++.+|+.  .+ |....        .+    +....+++|+..++
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~--~~~~~~~~--------~~----~~~~~~kp~~~~~~  175 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ--GYTPASTV--------FA----TDVVRGRPFPDMAL  175 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT--TCCCSEEE--------CG----GGSSSCTTSSHHHH
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc--cCCCceEe--------cH----HhcCCCCCCHHHHH
Confidence            578999999999999999999999999998889999888765  33 22111        11    11234678999999


Q ss_pred             HHHHHcCC---CeEEEEecCcccHHhhhcC
Q 025042          233 QIRKAHAY---KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       233 ~l~~~~g~---~~v~~vGDg~ND~~al~~v  259 (259)
                      .+++++|+   ++|+||||+.||+.|++.+
T Consensus       176 ~~~~~lgi~~~~~~i~vGD~~~Di~~a~~a  205 (277)
T 3iru_A          176 KVALELEVGHVNGCIKVDDTLPGIEEGLRA  205 (277)
T ss_dssp             HHHHHHTCSCGGGEEEEESSHHHHHHHHHT
T ss_pred             HHHHHcCCCCCccEEEEcCCHHHHHHHHHC
Confidence            99999997   4799999999999999753

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.59  E-value=8.3e-15  Score=121.41  Aligned_cols=90  Identities=13%  Similarity=0.092  Sum_probs=73.2

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++++.|++. ++++++|+.....++.+++.+|+..+.++...                ....+++|+..++
T Consensus       118 ~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~~~~~~~----------------~~~~~kp~~~~~~  180 (254)
T 3umc_A          118 RLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWDMLLCAD----------------LFGHYKPDPQVYL  180 (254)
T ss_dssp             SCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCSEECCHH----------------HHTCCTTSHHHHH
T ss_pred             cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcceEEeec----------------ccccCCCCHHHHH
Confidence            356789999999999885 88999999999889999999988432222221                1124688999999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      .+++++|+  ++++||||+.||+.|++.+
T Consensus       181 ~~~~~lgi~~~~~~~iGD~~~Di~~a~~a  209 (254)
T 3umc_A          181 GACRLLDLPPQEVMLCAAHNYDLKAARAL  209 (254)
T ss_dssp             HHHHHHTCCGGGEEEEESCHHHHHHHHHT
T ss_pred             HHHHHcCCChHHEEEEcCchHhHHHHHHC
Confidence            99999998  8999999999999999853

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.59  E-value=3.5e-14  Score=116.01  Aligned_cols=91  Identities=19%  Similarity=0.175  Sum_probs=74.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|++. ++++++|++....++..++.+|+.  .+|...+..        ..    ...+++|+..++.
T Consensus        99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--~~f~~~~~~--------~~----~~~~kp~~~~~~~  163 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIK--DLFDSITTS--------EE----AGFFKPHPRIFEL  163 (234)
T ss_dssp             CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCG--GGCSEEEEH--------HH----HTBCTTSHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcH--HHcceeEec--------cc----cCCCCcCHHHHHH
Confidence            46889999999999999 999999999999999999999986  444332211        01    1235788999999


Q ss_pred             HHHHcCC--CeEEEEecCc-ccHHhhhcC
Q 025042          234 IRKAHAY--KVLAMIGDGA-TDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~-ND~~al~~v  259 (259)
                      +++++|+  +++++|||+. ||+.|++.+
T Consensus       164 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~a  192 (234)
T 3u26_A          164 ALKKAGVKGEEAVYVGDNPVKDCGGSKNL  192 (234)
T ss_dssp             HHHHHTCCGGGEEEEESCTTTTHHHHHTT
T ss_pred             HHHHcCCCchhEEEEcCCcHHHHHHHHHc
Confidence            9999998  8999999997 999999863

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.58  E-value=1.1e-14  Score=114.72  Aligned_cols=71  Identities=25%  Similarity=0.204  Sum_probs=60.3

Q ss_pred             HHHHHHHCCCcEEEEeCCccccHHHHHH--HcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042          163 LVKKLKANNKNVYLISGGFRHMINPIAS--VLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY  240 (259)
Q Consensus       163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~--~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~  240 (259)
                      .|+.|+++|+++.|+||+  ..++.+++  .+|++   +|..                     +++|+..++.+++++|+
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~---~~~g---------------------~~~K~~~l~~~~~~~gi   97 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK---TEVS---------------------VSDKLATVDEWRKEMGL   97 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---EECS---------------------CSCHHHHHHHHHHHTTC
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---EEEC---------------------CCChHHHHHHHHHHcCc
Confidence            789999999999999999  77888888  56662   3321                     36799999999999998


Q ss_pred             --CeEEEEecCcccHHhhhcC
Q 025042          241 --KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 --~~v~~vGDg~ND~~al~~v  259 (259)
                        ++++||||+.||++|++.+
T Consensus        98 ~~~~~~~vGD~~nDi~~~~~a  118 (168)
T 3ewi_A           98 CWKEVAYLGNEVSDEECLKRV  118 (168)
T ss_dssp             CGGGEEEECCSGGGHHHHHHS
T ss_pred             ChHHEEEEeCCHhHHHHHHHC
Confidence              8999999999999999753

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.58  E-value=1.1e-15  Score=119.12  Aligned_cols=114  Identities=18%  Similarity=0.160  Sum_probs=89.0

Q ss_pred             HHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCC
Q 025042           77 LQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRL  156 (259)
Q Consensus        77 ~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  156 (259)
                      .|.+.++++++||+||||+++...      ...            .+                           .....+
T Consensus         3 ~~~~~~~k~v~~DlDGTL~~~~~~------~~~------------~~---------------------------~~~~~~   37 (162)
T 2p9j_A            3 RDRVKKLKLLIMDIDGVLTDGKLY------YTE------------HG---------------------------ETIKVF   37 (162)
T ss_dssp             HHHHHHCCEEEECCTTTTSCSEEE------EET------------TE---------------------------EEEEEE
T ss_pred             cccccceeEEEEecCcceECCcee------ecC------------CC---------------------------ceeeee
Confidence            356778999999999999875420      000            00                           000124


Q ss_pred             CccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHH
Q 025042          157 SPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRK  236 (259)
Q Consensus       157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~  236 (259)
                      .|+..++|+.|+++|++++++||.....++.+++++|++  .+|..                     +++|...++.+++
T Consensus        38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~--~~~~~---------------------~kp~~~~~~~~~~   94 (162)
T 2p9j_A           38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE--EIYTG---------------------SYKKLEIYEKIKE   94 (162)
T ss_dssp             EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC--EEEEC---------------------C--CHHHHHHHHH
T ss_pred             cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH--hhccC---------------------CCCCHHHHHHHHH
Confidence            567789999999999999999999999999999999996  55532                     4779999999999


Q ss_pred             HcCC--CeEEEEecCcccHHhhhc
Q 025042          237 AHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       237 ~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ++|+  ++++||||+.||+++++.
T Consensus        95 ~~~~~~~~~~~vGD~~~Di~~a~~  118 (162)
T 2p9j_A           95 KYSLKDEEIGFIGDDVVDIEVMKK  118 (162)
T ss_dssp             HTTCCGGGEEEEECSGGGHHHHHH
T ss_pred             HcCCCHHHEEEECCCHHHHHHHHH
Confidence            9888  789999999999999875

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.57  E-value=7.6e-15  Score=119.61  Aligned_cols=161  Identities=17%  Similarity=0.208  Sum_probs=97.8

Q ss_pred             cCcCEEEEeCCCcccccchH--H---HHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC--CCHHH---HHHHHH
Q 025042           81 RTADAVCFDVDSTVCVDEGI--D---ELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQ---VQDFLE  150 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~--~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---i~~~~~  150 (259)
                      .++++|+||+||||++.+..  .   ...+..+...........+..  .+..+.+........  .....   +.+...
T Consensus         2 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (229)
T 2fdr_A            2 SGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAG--MTWKNILLQVESEASIPLSASLLDKSEKLLD   79 (229)
T ss_dssp             -CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTT--CCHHHHHHHHHHHHCCCCCTHHHHHHHHHHH
T ss_pred             CCccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            46899999999999986532  1   222233332221222222221  233333332222221  11111   111111


Q ss_pred             -h--CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCC--C
Q 025042          151 -K--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRS--G  225 (259)
Q Consensus       151 -~--~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~--~  225 (259)
                       .  ....++|++.++++.++.   +++++|++....++.+++++|+.  .+|...+       +.+..    ...+  +
T Consensus        80 ~~~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~--~~~~~~~-------~~~~~----~~~~~~k  143 (229)
T 2fdr_A           80 MRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLK--PYFAPHI-------YSAKD----LGADRVK  143 (229)
T ss_dssp             HHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCG--GGTTTCE-------EEHHH----HCTTCCT
T ss_pred             HHhhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChH--HhccceE-------Eeccc----cccCCCC
Confidence             1  124678999999988864   89999999988899999999986  4441111       11111    1235  7


Q ss_pred             ChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          226 GKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       226 ~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +|+..++.+++++|+  +++++|||+.||++|++.+
T Consensus       144 pk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~a  179 (229)
T 2fdr_A          144 PKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAA  179 (229)
T ss_dssp             TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHT
T ss_pred             cCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHC
Confidence            899999999999998  8999999999999999753

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.57  E-value=3.7e-15  Score=119.41  Aligned_cols=74  Identities=19%  Similarity=0.291  Sum_probs=66.3

Q ss_pred             HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC--
Q 025042          163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY--  240 (259)
Q Consensus       163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~--  240 (259)
                      +|+.|+++|++++++||+....++.+++.+|++  .+|..                     .++|+..++++++++|+  
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~--~~~~~---------------------~kpk~~~~~~~~~~~g~~~  117 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGIT--HLYQG---------------------QSNKLIAFSDLLEKLAIAP  117 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC--EEECS---------------------CSCSHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc--eeecC---------------------CCCCHHHHHHHHHHcCCCH
Confidence            899999999999999999999999999999996  55543                     47899999999999887  


Q ss_pred             CeEEEEecCcccHHhhhcC
Q 025042          241 KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~v  259 (259)
                      ++++||||+.||+++++.+
T Consensus       118 ~~~~~iGD~~~Di~~a~~a  136 (188)
T 2r8e_A          118 ENVAYVGDDLIDWPVMEKV  136 (188)
T ss_dssp             GGEEEEESSGGGHHHHTTS
T ss_pred             HHEEEECCCHHHHHHHHHC
Confidence            7899999999999999753

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.57  E-value=2.9e-15  Score=120.38  Aligned_cols=89  Identities=11%  Similarity=0.055  Sum_probs=71.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.+ ++.|+++ ++++++|++....++.+++.+|+.  .+|...+.        +..    ...+++|++.++.
T Consensus        73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~--~~f~~~~~--------~~~----~~~~Kp~~~~~~~  136 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL--RYFKGIFS--------AES----VKEYKPSPKVYKY  136 (201)
T ss_dssp             CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG--GGCSEEEE--------GGG----GTCCTTCHHHHHH
T ss_pred             cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH--HhCcEEEe--------hhh----cCCCCCCHHHHHH
Confidence            568999999 9999999 999999999988899999999986  44433221        111    1235678999999


Q ss_pred             HHHHcCCCeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      +++++|.++++||||+.||+.|++.
T Consensus       137 ~~~~~~~~~~~~vGD~~~Di~~a~~  161 (201)
T 2w43_A          137 FLDSIGAKEAFLVSSNAFDVIGAKN  161 (201)
T ss_dssp             HHHHHTCSCCEEEESCHHHHHHHHH
T ss_pred             HHHhcCCCcEEEEeCCHHHhHHHHH
Confidence            9888775789999999999999875

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.56  E-value=3.3e-15  Score=120.15  Aligned_cols=73  Identities=25%  Similarity=0.295  Sum_probs=65.7

Q ss_pred             HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC--
Q 025042          163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY--  240 (259)
Q Consensus       163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~--  240 (259)
                      .++.|+++|++++++||+....++.+++.+|++  .+|..                     .++|+..++.+++++|+  
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~--~~~~~---------------------~kpk~~~~~~~~~~~~~~~  110 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT--HYYKG---------------------QVDKRSAYQHLKKTLGLND  110 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC--EEECS---------------------CSSCHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc--cceeC---------------------CCChHHHHHHHHHHhCCCH
Confidence            589999999999999999999999999999997  55554                     26799999999999988  


Q ss_pred             CeEEEEecCcccHHhhhc
Q 025042          241 KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~  258 (259)
                      ++++||||+.||++|++.
T Consensus       111 ~~~~~vGD~~~Di~~~~~  128 (191)
T 3n1u_A          111 DEFAYIGDDLPDLPLIQQ  128 (191)
T ss_dssp             GGEEEEECSGGGHHHHHH
T ss_pred             HHEEEECCCHHHHHHHHH
Confidence            799999999999999875

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.56  E-value=1.1e-14  Score=121.57  Aligned_cols=89  Identities=18%  Similarity=0.151  Sum_probs=69.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..+.|++.++++.|+++|+++++.|+.  ..+..+++.+|+.  ++|...+..            +....++|+++.+..
T Consensus       115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~--~~Fd~i~~~------------~~~~~~KP~p~~~~~  178 (250)
T 4gib_A          115 NDILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGIS--DKFDFIADA------------GKCKNNKPHPEIFLM  178 (250)
T ss_dssp             GGSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCG--GGCSEECCG------------GGCCSCTTSSHHHHH
T ss_pred             cccchhHHHHHHHHHhccccccccccc--chhhhHhhhcccc--cccceeecc------------cccCCCCCcHHHHHH
Confidence            457899999999999999998876654  4467788999996  555443211            111246788899999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|+  ++|+||||+.+|+.+++.
T Consensus       179 a~~~lg~~p~e~l~VGDs~~Di~aA~~  205 (250)
T 4gib_A          179 SAKGLNVNPQNCIGIEDASAGIDAINS  205 (250)
T ss_dssp             HHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHhCCChHHeEEECCCHHHHHHHHH
Confidence            9999998  899999999999999875

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.55  E-value=7.7e-14  Score=115.84  Aligned_cols=86  Identities=19%  Similarity=0.278  Sum_probs=72.6

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++++.|+ .|++++++|++....++..++.+|+.  .+|...+.                 .++++++.++
T Consensus       110 ~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~--~~f~~i~~-----------------~~kp~~~~~~  169 (251)
T 2pke_A          110 PVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLS--DLFPRIEV-----------------VSEKDPQTYA  169 (251)
T ss_dssp             CCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGG--GTCCCEEE-----------------ESCCSHHHHH
T ss_pred             cCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcH--HhCceeee-----------------eCCCCHHHHH
Confidence            4578999999999999 99999999999888888899999886  44433221                 2467899999


Q ss_pred             HHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      .+++++|+  ++|++|||+. ||+.|++.
T Consensus       170 ~~~~~l~~~~~~~i~iGD~~~~Di~~a~~  198 (251)
T 2pke_A          170 RVLSEFDLPAERFVMIGNSLRSDVEPVLA  198 (251)
T ss_dssp             HHHHHHTCCGGGEEEEESCCCCCCHHHHH
T ss_pred             HHHHHhCcCchhEEEECCCchhhHHHHHH
Confidence            99999998  8999999999 99999875

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.55  E-value=3.2e-14  Score=119.45  Aligned_cols=91  Identities=16%  Similarity=0.151  Sum_probs=72.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.|+++|++++++|+... .++.+++.+|+.  .+|...+.        +..    ...+++++..++.
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~--~~f~~~~~--------~~~----~~~~Kp~~~~~~~  169 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLR--EHFDFVLT--------SEA----AGWPKPDPRIFQE  169 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCG--GGCSCEEE--------HHH----HSSCTTSHHHHHH
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcH--HhhhEEEe--------ecc----cCCCCCCHHHHHH
Confidence            36899999999999999999999999766 468889999986  44433221        111    1235789999999


Q ss_pred             HHHHcCC--CeEEEEecCc-ccHHhhhcC
Q 025042          234 IRKAHAY--KVLAMIGDGA-TDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~-ND~~al~~v  259 (259)
                      +++++|+  ++++||||+. ||+.|++.+
T Consensus       170 ~~~~~g~~~~~~~~vGD~~~~Di~~a~~a  198 (263)
T 3k1z_A          170 ALRLAHMEPVVAAHVGDNYLCDYQGPRAV  198 (263)
T ss_dssp             HHHHHTCCGGGEEEEESCHHHHTHHHHTT
T ss_pred             HHHHcCCCHHHEEEECCCcHHHHHHHHHC
Confidence            9999998  8999999997 999998753

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.54  E-value=1.4e-13  Score=112.51  Aligned_cols=162  Identities=16%  Similarity=0.111  Sum_probs=95.4

Q ss_pred             ccCcCEEEEeCCCcccccch-----HHHHHHHhcCchhHHHHHHHHc---------CCCCcHHHHHHHHH----hhcC--
Q 025042           80 WRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAM---------GGSVPFEEALAARL----SLFK--  139 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~~-----~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~----~~~~--  139 (259)
                      +.++|+|+||+||||++.+.     +.......+.......+...+.         .+...+.+.....+    ....  
T Consensus         3 ~~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (240)
T 3smv_A            3 LTDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLE   82 (240)
T ss_dssp             GGGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCC
T ss_pred             CccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCC
Confidence            45789999999999988652     1222233333221112211111         11222332222221    1111  


Q ss_pred             CCHHHHHHHHHh-CCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCC
Q 025042          140 PSLSQVQDFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN  218 (259)
Q Consensus       140 ~~~~~i~~~~~~-~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~  218 (259)
                      ...+....+... ....++|++.++++.|++ |++++++|+......+..++.++-..+.++...            .. 
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~fd~i~~~~------------~~-  148 (240)
T 3smv_A           83 PDAAEREEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVEFDHIITAQ------------DV-  148 (240)
T ss_dssp             CCHHHHHHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSCCSEEEEHH------------HH-
T ss_pred             CCHHHHHHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCccCEEEEcc------------cc-
Confidence            122223333322 235789999999999999 899999999988888888777653222222221            11 


Q ss_pred             CCCcCCCChHHHHHHH---HHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQI---RKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l---~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                         ..+++++..++..   ++++|+  ++++||||+. ||+.|++.
T Consensus       149 ---~~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~  191 (240)
T 3smv_A          149 ---GSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPAND  191 (240)
T ss_dssp             ---TSCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHH
T ss_pred             ---CCCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHH
Confidence               1245666655555   788888  8999999996 99999875

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.54  E-value=1.2e-14  Score=121.61  Aligned_cols=93  Identities=12%  Similarity=0.097  Sum_probs=72.8

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++|++.++++.+++.|++++++|++....++.+++.+|+.  .+|...+       +.+.    ....+++|+..++.
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~--~~~~~~~-------~~~~----~~~~~kp~~~~~~~  168 (267)
T 1swv_A          102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ--GYKPDFL-------VTPD----DVPAGRPYPWMCYK  168 (267)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT--TCCCSCC-------BCGG----GSSCCTTSSHHHHH
T ss_pred             cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--ccChHhe-------ecCC----ccCCCCCCHHHHHH
Confidence            568899999999999999999999999888888888888765  3331111       1111    11235789999999


Q ss_pred             HHHHcCC---CeEEEEecCcccHHhhhcC
Q 025042          234 IRKAHAY---KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       234 l~~~~g~---~~v~~vGDg~ND~~al~~v  259 (259)
                      +++++|+   +++++|||+.||++|++.+
T Consensus       169 ~~~~lgi~~~~~~i~iGD~~nDi~~a~~a  197 (267)
T 1swv_A          169 NAMELGVYPMNHMIKVGDTVSDMKEGRNA  197 (267)
T ss_dssp             HHHHHTCCSGGGEEEEESSHHHHHHHHHT
T ss_pred             HHHHhCCCCCcCEEEEeCCHHHHHHHHHC
Confidence            9999997   4799999999999999753

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.53  E-value=2.6e-14  Score=112.96  Aligned_cols=92  Identities=14%  Similarity=0.152  Sum_probs=72.0

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCcc---------------ccHHHHHHHcC--CCCCcEeecceeecCCCceeccc
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINPIASVLG--IPPENIFANQLLFKSSGEFLGFD  216 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---------------~~~~~i~~~lg--i~~~~~~~~~l~~~~~~~~~g~~  216 (259)
                      ..++|++.++|+.|+++|++++++||...               ..++..++.+|  ++  .+|.....           
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~-----------   92 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVD--AIFMCPHG-----------   92 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCC--EEEEECCC-----------
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCcee--EEEEcCCC-----------
Confidence            46889999999999999999999999876               45677788888  54  55532110           


Q ss_pred             CCCCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          217 ANEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       217 ~~~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..+....+++++..++.+++++|+  ++++||||+.||+.+++.
T Consensus        93 ~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~  136 (179)
T 3l8h_A           93 PDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQ  136 (179)
T ss_dssp             TTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence            001122357889999999999998  899999999999999874

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.53  E-value=9.8e-14  Score=116.55  Aligned_cols=91  Identities=13%  Similarity=0.186  Sum_probs=73.3

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|+.|++ +++++++|++....++.+++.+|+.  .+|...+.        +..    ...++++++.++
T Consensus       119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~--~~f~~i~~--------~~~----~~~~KP~p~~~~  183 (260)
T 2gfh_A          119 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ--SYFDAIVI--------GGE----QKEEKPAPSIFY  183 (260)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG--GGCSEEEE--------GGG----SSSCTTCHHHHH
T ss_pred             cCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH--hhhheEEe--------cCC----CCCCCCCHHHHH
Confidence            35789999999999998 5999999999999999999999996  55543221        111    123577899999


Q ss_pred             HHHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      .+++++|+  ++++||||+ .||+.+++.
T Consensus       184 ~~~~~~~~~~~~~~~vGDs~~~Di~~A~~  212 (260)
T 2gfh_A          184 HCCDLLGVQPGDCVMVGDTLETDIQGGLN  212 (260)
T ss_dssp             HHHHHHTCCGGGEEEEESCTTTHHHHHHH
T ss_pred             HHHHHcCCChhhEEEECCCchhhHHHHHH
Confidence            99999998  799999995 999999875

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.52  E-value=4.3e-14  Score=112.85  Aligned_cols=86  Identities=14%  Similarity=0.182  Sum_probs=73.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCc-cccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGF-RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~-~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ..++|++.++|+.|+++|++++++|+.. ...++.+++.+|+.  .+|.....                 .+.+|+..++
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~--~~f~~~~~-----------------~~~~k~~~~~  127 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF--RYFVHREI-----------------YPGSKITHFE  127 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT--TTEEEEEE-----------------SSSCHHHHHH
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH--hhcceeEE-----------------EeCchHHHHH
Confidence            4688999999999999999999999998 68899999999997  55654321                 1357889999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+++++|+  ++++||||+.+|+.+++.
T Consensus       128 ~~~~~~~~~~~~~~~igD~~~Di~~a~~  155 (187)
T 2wm8_A          128 RLQQKTGIPFSQMIFFDDERRNIVDVSK  155 (187)
T ss_dssp             HHHHHHCCCGGGEEEEESCHHHHHHHHT
T ss_pred             HHHHHcCCChHHEEEEeCCccChHHHHH
Confidence            99999998  789999999999999875

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.51  E-value=1.6e-13  Score=114.05  Aligned_cols=89  Identities=17%  Similarity=0.122  Sum_probs=70.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..+.||+.++++.|+++|++++++|+..  .+..+++.+|+.  .+|...+..+            ....++|+++.+..
T Consensus        94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~--~~fd~i~~~~------------~~~~~KP~p~~~~~  157 (243)
T 4g9b_A           94 NAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELR--EFFTFCADAS------------QLKNSKPDPEIFLA  157 (243)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCG--GGCSEECCGG------------GCSSCTTSTHHHHH
T ss_pred             ccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhc--cccccccccc------------cccCCCCcHHHHHH
Confidence            3578999999999999999999999754  467788999996  5554322111            11235778899999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|+  ++|+||||+.+|+.+++.
T Consensus       158 a~~~lg~~p~e~l~VgDs~~di~aA~~  184 (243)
T 4g9b_A          158 ACAGLGVPPQACIGIEDAQAGIDAINA  184 (243)
T ss_dssp             HHHHHTSCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHcCCChHHEEEEcCCHHHHHHHHH
Confidence            9999998  899999999999999874

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.50  E-value=1.6e-13  Score=115.88  Aligned_cols=91  Identities=14%  Similarity=0.154  Sum_probs=72.6

Q ss_pred             CCCCccHHHHHHHHHHC-CCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          154 PRLSPGIDELVKKLKAN-NKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~-g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ..++|++.++++.|++. |++++++|++....++.+++.+|+.  . |...+        .+..    ...+++|++.++
T Consensus       113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~-f~~i~--------~~~~----~~~~kp~~~~~~  177 (275)
T 2qlt_A          113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--R-PEYFI--------TAND----VKQGKPHPEPYL  177 (275)
T ss_dssp             CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--C-CSSEE--------CGGG----CSSCTTSSHHHH
T ss_pred             CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--c-cCEEE--------Eccc----CCCCCCChHHHH
Confidence            56889999999999999 9999999999998899999999885  2 22111        1111    123578899999


Q ss_pred             HHHHHcCC---------CeEEEEecCcccHHhhhcC
Q 025042          233 QIRKAHAY---------KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       233 ~l~~~~g~---------~~v~~vGDg~ND~~al~~v  259 (259)
                      .+++++|+         ++|++|||+.||++|++.+
T Consensus       178 ~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~A  213 (275)
T 2qlt_A          178 KGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAA  213 (275)
T ss_dssp             HHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHT
T ss_pred             HHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHc
Confidence            99999886         5899999999999999753

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.49  E-value=1e-13  Score=113.15  Aligned_cols=89  Identities=15%  Similarity=0.092  Sum_probs=65.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|++++++|+.... ++.+++.+|+.  .+|...+..            +....+++++..++.
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~--~~f~~~~~~------------~~~~~~Kp~~~~~~~  158 (220)
T 2zg6_A           94 AFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLK--KYFDALALS------------YEIKAVKPNPKIFGF  158 (220)
T ss_dssp             EEECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCG--GGCSEEC-----------------------CCHHHH
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcH--hHeeEEEec------------cccCCCCCCHHHHHH
Confidence            368899999999999999999999998764 78889999986  455432211            011124567778899


Q ss_pred             HHHHcCCCeEEEEecCcc-cHHhhhc
Q 025042          234 IRKAHAYKVLAMIGDGAT-DLEVSIF  258 (259)
Q Consensus       234 l~~~~g~~~v~~vGDg~N-D~~al~~  258 (259)
                      +++++|+.. +||||+.+ |+.+++.
T Consensus       159 ~~~~~~~~~-~~vgD~~~~Di~~a~~  183 (220)
T 2zg6_A          159 ALAKVGYPA-VHVGDIYELDYIGAKR  183 (220)
T ss_dssp             HHHHHCSSE-EEEESSCCCCCCCSSS
T ss_pred             HHHHcCCCe-EEEcCCchHhHHHHHH
Confidence            999989855 99999999 9998875

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.49  E-value=8.9e-14  Score=113.31  Aligned_cols=101  Identities=10%  Similarity=0.101  Sum_probs=73.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCc---------------cccHHHHHHHcCCCCCcEeecceeecCCCceecccCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGF---------------RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN  218 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~---------------~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~  218 (259)
                      ..++||+.++|++|+++|++++++|+..               ...++.+++.+|+..+.++...-  +.++ ..+. ..
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~--~~~~-~~~~-~~  124 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPH--HPQG-SVEE-FR  124 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECC--BTTC-SSGG-GB
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCc--CCCC-cccc-cC
Confidence            4688999999999999999999999988               46778888999985323222110  0011 1110 11


Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +....+++|+..++.+++++|+  ++++||||+.||+.+++.
T Consensus       125 ~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~  166 (211)
T 2gmw_A          125 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVA  166 (211)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHH
T ss_pred             ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH
Confidence            1223467889999999999988  799999999999999875

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.48  E-value=3.5e-14  Score=123.59  Aligned_cols=176  Identities=13%  Similarity=0.097  Sum_probs=100.8

Q ss_pred             ccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHc---CCCC---cHH--HHHHHH--HhhcCCCHH-HHHHH
Q 025042           80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAM---GGSV---PFE--EALAAR--LSLFKPSLS-QVQDF  148 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~---~~~--~~~~~~--~~~~~~~~~-~i~~~  148 (259)
                      ..++++|+||+||||++.+....+.+..+.+..+...+.+..   .+..   .+.  +.+...  ....++... ...+.
T Consensus        18 ~~~~kli~fDlDGTLld~~~~~~l~~~~~~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~   97 (332)
T 1y8a_A           18 YFQGHMFFTDWEGPWILTDFALELCMAVFNNARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAAGVKNRDVERI   97 (332)
T ss_dssp             --CCCEEEECSBTTTBCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             CCCceEEEEECcCCCcCccHHHHHHHHHHCCCEEEEEcCCCchhhhhhhhccCeechhhcCCcCeEEEcCCcEEEECCeE
Confidence            346899999999999998766677776666655444444433   2111   111  112111  111233221 12222


Q ss_pred             HHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecC---------------CCcee
Q 025042          149 LEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKS---------------SGEFL  213 (259)
Q Consensus       149 ~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~---------------~~~~~  213 (259)
                      +... ..+++++.++++.+++ |+.+.++|++....+....+.+++. +.++...+.++.               ++.+.
T Consensus        98 ~~~~-~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~  174 (332)
T 1y8a_A           98 AELS-AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVR-GELHGTEVDFDSIAVPEGLREELLSIIDVIAS  174 (332)
T ss_dssp             HHHH-CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCC-SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHH
T ss_pred             eecc-CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhh-hhhcccccchhhhccccccceeEEecCHHHHh
Confidence            2221 3578999999999999 9999999998877777777777773 133333222110               00111


Q ss_pred             cc-----------------cCCC---CCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          214 GF-----------------DANE---PTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       214 g~-----------------~~~~---~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      ..                 ....   ....+.+|..+++.+....+.+.|++||||.||++|++.
T Consensus       175 ~~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~  239 (332)
T 1y8a_A          175 LSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEA  239 (332)
T ss_dssp             CCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHH
T ss_pred             hhhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHH
Confidence            00                 0000   122234588888865443222239999999999999985

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.48  E-value=1.6e-13  Score=112.82  Aligned_cols=157  Identities=17%  Similarity=0.109  Sum_probs=92.6

Q ss_pred             cCcCEEEEeCCCcccccchHH--HH---HHHhcCchhH--HHHHHHH--cCCCCcHHHHHHHHHhhcC--CCHHHHHHHH
Q 025042           81 RTADAVCFDVDSTVCVDEGID--EL---AEFCGAGKAV--AEWTARA--MGGSVPFEEALAARLSLFK--PSLSQVQDFL  149 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~~--~l---~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~  149 (259)
                      .++++|+||+||||++.+...  .+   ....+.....  ......+  ..+...+.+.+........  ...+...++.
T Consensus         9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (231)
T 2p11_A            9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLLMSSFL   88 (231)
T ss_dssp             CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGGGHHHH
T ss_pred             CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHHHHHHH
Confidence            568899999999999865321  22   2222211110  0001111  1122233333322211111  1122223333


Q ss_pred             HhC--CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCCh
Q 025042          150 EKR--PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGK  227 (259)
Q Consensus       150 ~~~--~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K  227 (259)
                      ...  ...++||+.++|+.|+++| +++++|++....++.+++.+|+.  .+|.....                 .+.+|
T Consensus        89 ~~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~--~~f~~~~~-----------------~~~~K  148 (231)
T 2p11_A           89 IDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLW--DEVEGRVL-----------------IYIHK  148 (231)
T ss_dssp             HHCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHH--HHTTTCEE-----------------EESSG
T ss_pred             HHHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcH--HhcCeeEE-----------------ecCCh
Confidence            332  3468999999999999999 99999999999999999999986  44433211                 12356


Q ss_pred             HHHHHHHHHHcCCCeEEEEecCcc---cHHhhh
Q 025042          228 AAAVQQIRKAHAYKVLAMIGDGAT---DLEVSI  257 (259)
Q Consensus       228 ~~~v~~l~~~~g~~~v~~vGDg~N---D~~al~  257 (259)
                      ...++.+++....++++||||+.+   |+.+++
T Consensus       149 ~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~  181 (231)
T 2p11_A          149 ELMLDQVMECYPARHYVMVDDKLRILAAMKKAW  181 (231)
T ss_dssp             GGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCceEEEEcCccchhhhhHHHH
Confidence            667777766333379999999999   665554

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.47  E-value=7.4e-13  Score=107.90  Aligned_cols=87  Identities=16%  Similarity=0.176  Sum_probs=67.3

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++++.|++. ++++++|++...     ++.+|+.  .+|...+..        ..    ...+++|+..++
T Consensus       103 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~--~~f~~~~~~--------~~----~~~~kp~~~~~~  162 (230)
T 3vay_A          103 QVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLA--DYFAFALCA--------ED----LGIGKPDPAPFL  162 (230)
T ss_dssp             CCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTG--GGCSEEEEH--------HH----HTCCTTSHHHHH
T ss_pred             cCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcH--HHeeeeEEc--------cc----cCCCCcCHHHHH
Confidence            467899999999999988 999999988765     5667775  444322211        01    123578999999


Q ss_pred             HHHHHcCC--CeEEEEecCc-ccHHhhhcC
Q 025042          233 QIRKAHAY--KVLAMIGDGA-TDLEVSIFI  259 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~-ND~~al~~v  259 (259)
                      .+++++|+  ++++||||+. ||+.|++.+
T Consensus       163 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~a  192 (230)
T 3vay_A          163 EALRRAKVDASAAVHVGDHPSDDIAGAQQA  192 (230)
T ss_dssp             HHHHHHTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred             HHHHHhCCCchheEEEeCChHHHHHHHHHC
Confidence            99999998  8999999998 999998753

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.47  E-value=1.5e-13  Score=113.41  Aligned_cols=103  Identities=20%  Similarity=0.318  Sum_probs=73.3

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecc--eeecCCCcee--------------------
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQ--LLFKSSGEFL--------------------  213 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~--l~~~~~~~~~--------------------  213 (259)
                      +.|.+.+.|++|+++|++++++||.....+..+++.++++. .+.+..  ..++.++...                    
T Consensus        23 i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~-~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~  101 (227)
T 1l6r_A           23 ISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING-PVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTS  101 (227)
T ss_dssp             BCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS-CEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSS
T ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC-eEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhc
Confidence            34678889999999999999999999999999999999862 122110  1111011111                    


Q ss_pred             ---------------------------------------cccCCCCCcCCCChHHHHHHHHHHcCC--CeEEEEecCccc
Q 025042          214 ---------------------------------------GFDANEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATD  252 (259)
Q Consensus       214 ---------------------------------------g~~~~~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND  252 (259)
                                                             +....+....+.+|...++.+++++|+  +++++||||.||
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD  181 (227)
T 1l6r_A          102 MRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNND  181 (227)
T ss_dssp             CBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGG
T ss_pred             CCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHh
Confidence                                                   000111223457999999999999987  789999999999


Q ss_pred             HHhhhcC
Q 025042          253 LEVSIFI  259 (259)
Q Consensus       253 ~~al~~v  259 (259)
                      ++|++.+
T Consensus       182 ~~m~~~a  188 (227)
T 1l6r_A          182 MPMFQLP  188 (227)
T ss_dssp             HHHHTSS
T ss_pred             HHHHHHc
Confidence            9999863

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.45  E-value=2.3e-13  Score=108.82  Aligned_cols=95  Identities=15%  Similarity=0.120  Sum_probs=75.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCcc---ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFR---HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA  230 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~  230 (259)
                      ..++||+.++|+.|+++|++++++|+...   ..++.+++.+|+.  .+|...+..+        .........++++..
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~--~~fd~i~~~~--------~~~~~~~~~KP~p~~  102 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII--DYFDFIYASN--------SELQPGKMEKPDKTI  102 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG--GGEEEEEECC--------TTSSTTCCCTTSHHH
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch--hheEEEEEcc--------ccccccCCCCcCHHH
Confidence            57899999999999999999999999877   7888899999996  5565433211        100001235778899


Q ss_pred             HHHHHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          231 VQQIRKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       231 v~~l~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      ++.+++++|+  ++++||||+ .+|+.+++.
T Consensus       103 ~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~  133 (189)
T 3ib6_A          103 FDFTLNALQIDKTEAVMVGNTFESDIIGANR  133 (189)
T ss_dssp             HHHHHHHHTCCGGGEEEEESBTTTTHHHHHH
T ss_pred             HHHHHHHcCCCcccEEEECCCcHHHHHHHHH
Confidence            9999999998  899999999 799999875

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.45  E-value=7.8e-13  Score=111.24  Aligned_cols=90  Identities=10%  Similarity=0.110  Sum_probs=72.1

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc---CCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL---GIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA  229 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l---gi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~  229 (259)
                      ...++||+.++|+.|+++|++++++|++....++.+++.+   |+.  .+|...+        .+ .    .. +++.+.
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~--~~fd~i~--------~~-~----~~-~KP~p~  191 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL--ELVDGHF--------DT-K----IG-HKVESE  191 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG--GGCSEEE--------CG-G----GC-CTTCHH
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChH--hhccEEE--------ec-C----CC-CCCCHH
Confidence            3578999999999999999999999999988888888855   465  4443321        11 1    12 577889


Q ss_pred             HHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          230 AVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       230 ~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++.+++++|+  ++|+||||+.+|+.+++.
T Consensus       192 ~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~  222 (261)
T 1yns_A          192 SYRKIADSIGCSTNNILFLTDVTREASAAEE  222 (261)
T ss_dssp             HHHHHHHHHTSCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHhCcCcccEEEEcCCHHHHHHHHH
Confidence            99999999998  899999999999998875

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=99.43  E-value=7.3e-13  Score=114.84  Aligned_cols=104  Identities=26%  Similarity=0.353  Sum_probs=80.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH----cCCCCCcEeecceeecC--------------CCceecc
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV----LGIPPENIFANQLLFKS--------------SGEFLGF  215 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~----lgi~~~~~~~~~l~~~~--------------~~~~~g~  215 (259)
                      +.++|++.++++.|+++|++++|+|++..+.++.+++.    +||+++++++..+..+.              +|.+...
T Consensus       142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~  221 (327)
T 4as2_A          142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPK  221 (327)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGG
T ss_pred             cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeecccccccccccccccccccccc
Confidence            36899999999999999999999999999999999987    68998999998876642              2222211


Q ss_pred             cC---------CCCCcCCCChHHHHHHHHHHcCCCeEEEEecC-cccHHhhhc
Q 025042          216 DA---------NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       216 ~~---------~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg-~ND~~al~~  258 (259)
                      ..         ..+.+..+.|+..|+++... |.+.++++||| ..|++||..
T Consensus       222 ~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~-g~~Pi~a~Gns~dgD~~ML~~  273 (327)
T 4as2_A          222 ANLDLEVTPYLWTPATWMAGKQAAILTYIDR-WKRPILVAGDTPDSDGYMLFN  273 (327)
T ss_dssp             GGTTCEEEEEECSSCSSTHHHHHHHHHHTCS-SCCCSEEEESCHHHHHHHHHH
T ss_pred             ccccccccccccccccccCccHHHHHHHHhh-CCCCeEEecCCCCCCHHHHhc
Confidence            11         11223356799999988754 33689999999 579999953

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.42  E-value=2.6e-12  Score=107.71  Aligned_cols=84  Identities=12%  Similarity=0.174  Sum_probs=66.0

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc--C---------CC--CCcEeecceeecCCCceecccCCCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL--G---------IP--PENIFANQLLFKSSGEFLGFDANEP  220 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l--g---------i~--~~~~~~~~l~~~~~~~~~g~~~~~~  220 (259)
                      ..++||+.++|+.    |++++++|++.+..++.+++.+  |         +.  .+.+|...+                
T Consensus       124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~----------------  183 (253)
T 2g80_A          124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINT----------------  183 (253)
T ss_dssp             BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHH----------------
T ss_pred             CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeec----------------
Confidence            4688999999987    8999999999999888888876  5         22  013332210                


Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                       ..+++.++.+...++++|+  ++|+||||+.+|+.+++.
T Consensus       184 -~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~  222 (253)
T 2g80_A          184 -SGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAG  222 (253)
T ss_dssp             -HCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHT
T ss_pred             -cCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH
Confidence             0247788999999999998  899999999999999875

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.38  E-value=5.1e-13  Score=100.31  Aligned_cols=88  Identities=14%  Similarity=0.084  Sum_probs=69.5

Q ss_pred             CccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHH
Q 025042          157 SPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRK  236 (259)
Q Consensus       157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~  236 (259)
                      +|++.++++.|+++|++++++|+.....++.+++.+|+.  .+|...+.        +..    ....+++...++.+.+
T Consensus        20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~--~~f~~i~~--------~~~----~~~~Kp~~~~~~~~~~   85 (137)
T 2pr7_A           20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN--GVVDKVLL--------SGE----LGVEKPEEAAFQAAAD   85 (137)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT--TSSSEEEE--------HHH----HSCCTTSHHHHHHHHH
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH--hhccEEEE--------ecc----CCCCCCCHHHHHHHHH
Confidence            478999999999999999999999999999999988875  33332211        000    0125678889999999


Q ss_pred             HcCC--CeEEEEecCcccHHhhhc
Q 025042          237 AHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       237 ~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ++|+  ++++||||+.+|+.+++.
T Consensus        86 ~~~~~~~~~~~vgD~~~di~~a~~  109 (137)
T 2pr7_A           86 AIDLPMRDCVLVDDSILNVRGAVE  109 (137)
T ss_dssp             HTTCCGGGEEEEESCHHHHHHHHH
T ss_pred             HcCCCcccEEEEcCCHHHHHHHHH
Confidence            9988  689999999999998864

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.38  E-value=3.2e-13  Score=108.94  Aligned_cols=86  Identities=15%  Similarity=0.103  Sum_probs=64.6

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+++|+++.++||..+..+..+++ ..++  .++...                ....++++++.+..
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-~~~d--~v~~~~----------------~~~~~KP~p~~~~~   95 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-PVND--WMIAAP----------------RPTAGWPQPDACWM   95 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-TTTT--TCEECC----------------CCSSCTTSTHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-ccCC--EEEECC----------------cCCCCCCChHHHHH
Confidence            3678999999999999999999999987776644443 2122  333221                01235778889999


Q ss_pred             HHHHcCC---CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY---KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~---~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|+   ++++||||+.+|+.+++.
T Consensus        96 a~~~l~~~~~~~~v~VGDs~~Di~aA~~  123 (196)
T 2oda_A           96 ALMALNVSQLEGCVLISGDPRLLQSGLN  123 (196)
T ss_dssp             HHHHTTCSCSTTCEEEESCHHHHHHHHH
T ss_pred             HHHHcCCCCCccEEEEeCCHHHHHHHHH
Confidence            9998887   479999999999998864

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.37  E-value=1.4e-12  Score=106.57  Aligned_cols=101  Identities=12%  Similarity=0.054  Sum_probs=74.7

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCcc---------------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN  218 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---------------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~  218 (259)
                      ..+.|++.++|+.|+++|++++++||...               ..++.+++++|+..+.++.....  .+|.+.  ...
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~--~~g~~~--~~~  130 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYH--EAGVGP--LAI  130 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCC--TTCCST--TCC
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecC--CCCcee--ecc
Confidence            46789999999999999999999999887               67788889999743333322110  011111  001


Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +....+++|+..++.+++++|+  ++++||||+.||+.+++.
T Consensus       131 ~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~  172 (218)
T 2o2x_A          131 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKR  172 (218)
T ss_dssp             SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHH
T ss_pred             cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHH
Confidence            2223467889999999999998  799999999999999875

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.36  E-value=6.5e-13  Score=121.17  Aligned_cols=91  Identities=5%  Similarity=-0.022  Sum_probs=63.7

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCC--ccccHHHHHHHc--CCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGG--FRHMINPIASVL--GIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA  229 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~--~~~~~~~i~~~l--gi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~  229 (259)
                      ..++|++.++|+.|+++|++++++|++  ...........+  |+.  .+|...+        ++...    ..++++++
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~--~~fd~i~--------~~~~~----~~~KP~p~  164 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELK--MHFDFLI--------ESCQV----GMVKPEPQ  164 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHH--TTSSEEE--------EHHHH----TCCTTCHH
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhh--hheeEEE--------ecccc----CCCCCCHH
Confidence            478999999999999999999999997  222222222222  332  2222211        11111    23578899


Q ss_pred             HHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          230 AVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       230 ~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++..++++|+  ++|+||||+.+|+.+++.
T Consensus       165 ~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~  195 (555)
T 3i28_A          165 IYKFLLDTLKASPSEVVFLDDIGANLKPARD  195 (555)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhHEEEECCcHHHHHHHHH
Confidence            99999999998  899999999999998864

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.33  E-value=5.8e-12  Score=106.29  Aligned_cols=39  Identities=23%  Similarity=0.310  Sum_probs=34.5

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ...+.+|+..++.+++++|+  +++++||||.||++|++.+
T Consensus       192 ~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~a  232 (279)
T 4dw8_A          192 VPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFA  232 (279)
T ss_dssp             ECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             ecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHc
Confidence            34456899999999999998  7899999999999999864

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.32  E-value=3.9e-12  Score=106.85  Aligned_cols=40  Identities=18%  Similarity=0.199  Sum_probs=35.3

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+.+|+..++.+++++|+  +++++||||.||++|++.+
T Consensus       194 i~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~a  235 (274)
T 3fzq_A          194 IIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQAS  235 (274)
T ss_dssp             EEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTC
T ss_pred             EeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhc
Confidence            344567899999999999998  7999999999999999864

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.31  E-value=1.4e-11  Score=101.58  Aligned_cols=37  Identities=22%  Similarity=0.286  Sum_probs=33.3

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..+.+|+..++.+++++|+  +++++|||+.||++|++.
T Consensus       149 ~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~  187 (231)
T 1wr8_A          149 KPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKV  187 (231)
T ss_dssp             CTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHH
T ss_pred             cCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence            3467899999999999998  789999999999999975

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.31  E-value=2.2e-12  Score=110.62  Aligned_cols=39  Identities=28%  Similarity=0.393  Sum_probs=34.8

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ...+.+|+..++.+++++|+  +++++|||+.||++|++.+
T Consensus       223 ~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~a  263 (304)
T 3l7y_A          223 ITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLA  263 (304)
T ss_dssp             EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHC
T ss_pred             EcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhc
Confidence            34567899999999999998  8999999999999999864

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.31  E-value=1.7e-11  Score=104.00  Aligned_cols=39  Identities=15%  Similarity=0.181  Sum_probs=34.6

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ...+.+|+..++.+++++|+  +++++||||.||++|++.+
T Consensus       197 ~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~a  237 (290)
T 3dnp_A          197 VPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELA  237 (290)
T ss_dssp             EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             EECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhc
Confidence            34457899999999999998  8999999999999999864

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.31  E-value=3.8e-12  Score=107.45  Aligned_cols=38  Identities=16%  Similarity=0.329  Sum_probs=31.9

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+.+|+..++.+++++|+  +++++||||.||++|++.+
T Consensus       193 ~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~a  232 (279)
T 3mpo_A          193 NRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYA  232 (279)
T ss_dssp             ESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHS
T ss_pred             cCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhc
Confidence            3456799999999999998  8999999999999999864

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.29  E-value=9.4e-12  Score=105.77  Aligned_cols=99  Identities=15%  Similarity=0.082  Sum_probs=68.2

Q ss_pred             CCCccHHHHHHHHHHC-CCcEEEEeCC---------------------ccccHHHHHHHcCCCCCcEeeccee--ecCCC
Q 025042          155 RLSPGIDELVKKLKAN-NKNVYLISGG---------------------FRHMINPIASVLGIPPENIFANQLL--FKSSG  210 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~-g~~v~ivTg~---------------------~~~~~~~i~~~lgi~~~~~~~~~l~--~~~~~  210 (259)
                      ..++++.++++.+++. |+++.+.|..                     ....+..+++.+|+.  ..+...-.  .+.++
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~~~~  199 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVS--VNINRCNPLAGDPED  199 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEE--EEEEECCGGGTCCTT
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCC--EEEEEccccccCCCC
Confidence            5678999999999887 9988888865                     334455667777774  33321100  00001


Q ss_pred             ceecccCCCCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          211 EFLGFDANEPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       211 ~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      .+.    .+......+|+..++.+++++|+  ++++||||+.||++|++.+
T Consensus       200 ~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~a  246 (289)
T 3gyg_A          200 SYD----VDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTV  246 (289)
T ss_dssp             EEE----EEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTS
T ss_pred             ceE----EEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhC
Confidence            111    11123467899999999999998  7899999999999999863

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.29  E-value=7.9e-14  Score=114.66  Aligned_cols=38  Identities=11%  Similarity=0.073  Sum_probs=34.1

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecC-cccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDG-ATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg-~ND~~al~~v  259 (259)
                      ..+++|+..++.+++++|+  ++|++|||+ .||++|++.+
T Consensus       173 ~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~a  213 (250)
T 2c4n_A          173 YVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQA  213 (250)
T ss_dssp             ECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHT
T ss_pred             EeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHc
Confidence            4578899999999999998  899999999 7999999863

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.27  E-value=1.4e-11  Score=103.46  Aligned_cols=130  Identities=16%  Similarity=0.227  Sum_probs=79.8

Q ss_pred             ccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCcc
Q 025042           80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPG  159 (259)
Q Consensus        80 ~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~  159 (259)
                      -.++++|+||+||||+++............                .+              .+...++.......+.||
T Consensus        56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~----------------~~--------------~~~~~~~~~~~~~~~~pg  105 (258)
T 2i33_A           56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGK----------------GY--------------PYKWDDWINKAEAEALPG  105 (258)
T ss_dssp             CSSEEEEEECSBTTTEECHHHHHHHHHHSC----------------CT--------------TTTHHHHHHHCCCEECTT
T ss_pred             CCCCCEEEEeCcccCcCCHHHHHHHHhccc----------------ch--------------HHHHHHHHHcCCCCcCcc
Confidence            347899999999999997642211111000                00              112334444445678999


Q ss_pred             HHHHHHHHHHCCCcEEEEeCCccc---cHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHH
Q 025042          160 IDELVKKLKANNKNVYLISGGFRH---MINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRK  236 (259)
Q Consensus       160 ~~e~l~~Lk~~g~~v~ivTg~~~~---~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~  236 (259)
                      +.++|+.|+++|++++++||....   .+...++.+|++  .+....+.       .+...       ..|......+.+
T Consensus       106 ~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~--~v~~~~vi-------~~~~~-------~~K~~~~~~~~~  169 (258)
T 2i33_A          106 SIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP--QATKEHIL-------LQDPK-------EKGKEKRRELVS  169 (258)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS--SCSTTTEE-------EECTT-------CCSSHHHHHHHH
T ss_pred             HHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC--cCCCceEE-------ECCCC-------CCCcHHHHHHHH
Confidence            999999999999999999998743   455566788885  11111111       11110       023333333333


Q ss_pred             HcCCCeEEEEecCcccHHhh
Q 025042          237 AHAYKVLAMIGDGATDLEVS  256 (259)
Q Consensus       237 ~~g~~~v~~vGDg~ND~~al  256 (259)
                      . +.+.++||||+.+|+.++
T Consensus       170 ~-~~~~~l~VGDs~~Di~aA  188 (258)
T 2i33_A          170 Q-THDIVLFFGDNLSDFTGF  188 (258)
T ss_dssp             H-HEEEEEEEESSGGGSTTC
T ss_pred             h-CCCceEEeCCCHHHhccc
Confidence            2 436799999999999987

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.27  E-value=1.1e-11  Score=105.25  Aligned_cols=38  Identities=24%  Similarity=0.318  Sum_probs=34.2

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+.+|+.+++.+++++|+  +++++|||+.||++|++.+
T Consensus       205 ~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~a  244 (285)
T 3pgv_A          205 AGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMA  244 (285)
T ss_dssp             ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhc
Confidence            4456899999999999998  8999999999999999864

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.27  E-value=6.2e-12  Score=105.50  Aligned_cols=40  Identities=15%  Similarity=0.147  Sum_probs=35.0

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+.+|+..++.+++++|+  +++++||||.||++|++.+
T Consensus       188 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~a  229 (268)
T 3r4c_A          188 VNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAA  229 (268)
T ss_dssp             EEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             EeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhC
Confidence            334467899999999999998  7999999999999999864

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.27  E-value=2.1e-12  Score=102.26  Aligned_cols=94  Identities=17%  Similarity=0.212  Sum_probs=66.8

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCC---------------ccccHHHHHHHcCCCCCcEeecceeecCCCceecccCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGG---------------FRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN  218 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~---------------~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~  218 (259)
                      ..++|++.++|+.|+++|++++++|+.               ....++.+++.+|+..+.++..           +....
T Consensus        41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~v~~s-----------~~~~~  109 (176)
T 2fpr_A           41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLIC-----------PHLPA  109 (176)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEEE-----------CCCGG
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeEEEEc-----------CCCCc
Confidence            468899999999999999999999998               5677888899999852222110           00000


Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +....+++++..++.+++++|+  ++++||||+.+|+.+++.
T Consensus       110 ~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~  151 (176)
T 2fpr_A          110 DECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAEN  151 (176)
T ss_dssp             GCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHH
T ss_pred             ccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH
Confidence            1112356788888888888887  799999999999999864

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.26  E-value=2.7e-11  Score=101.34  Aligned_cols=129  Identities=18%  Similarity=0.239  Sum_probs=88.8

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHH
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID  161 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~  161 (259)
                      ..++|+||+||||+++.........-..                             ........+|+......+.||+.
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~-----------------------------~f~~~~w~~wv~~~~~~~~pG~~  107 (262)
T 3ocu_A           57 KKKAVVADLNETMLDNSPYAGWQVQNNK-----------------------------PFDGKDWTRWVDARQSRAVPGAV  107 (262)
T ss_dssp             CEEEEEECCBTTTEECHHHHHHHHHHTC-----------------------------CCCHHHHHHHHHHTCCEECTTHH
T ss_pred             CCeEEEEECCCcCCCCchhhhhhccccc-----------------------------cCCHHHHHHHHHcCCCCCCccHH
Confidence            4579999999999997632111100000                             01223345555555578999999


Q ss_pred             HHHHHHHHCCCcEEEEeCCcc----ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHH
Q 025042          162 ELVKKLKANNKNVYLISGGFR----HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKA  237 (259)
Q Consensus       162 e~l~~Lk~~g~~v~ivTg~~~----~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~  237 (259)
                      ++++.|+++|++++++||...    ..+...++.+|++  .+..+.+....              ....|....+.+.+.
T Consensus       108 ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~--~~~~~~Lilr~--------------~~~~K~~~r~~l~~~  171 (262)
T 3ocu_A          108 EFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN--GVEESAFYLKK--------------DKSAKAARFAEIEKQ  171 (262)
T ss_dssp             HHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS--CCSGGGEEEES--------------SCSCCHHHHHHHHHT
T ss_pred             HHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC--cccccceeccC--------------CCCChHHHHHHHHhc
Confidence            999999999999999998765    4677788999997  22221221110              124688888888877


Q ss_pred             cCCCeEEEEecCcccHHhh
Q 025042          238 HAYKVLAMIGDGATDLEVS  256 (259)
Q Consensus       238 ~g~~~v~~vGDg~ND~~al  256 (259)
                       |++.+++|||..+|+++.
T Consensus       172 -Gy~iv~~vGD~~~Dl~~~  189 (262)
T 3ocu_A          172 -GYEIVLYVGDNLDDFGNT  189 (262)
T ss_dssp             -TEEEEEEEESSGGGGCST
T ss_pred             -CCCEEEEECCChHHhccc
Confidence             557899999999999873

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.26  E-value=3.4e-11  Score=100.52  Aligned_cols=40  Identities=25%  Similarity=0.409  Sum_probs=35.3

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+.+|+.+++.+++++|+  +++++||||.||++|++.+
T Consensus       177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~a  218 (258)
T 2pq0_A          177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFV  218 (258)
T ss_dssp             EEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHS
T ss_pred             EEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhC
Confidence            445567899999999999998  7999999999999999863

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.25  E-value=3.5e-11  Score=100.48  Aligned_cols=126  Identities=20%  Similarity=0.294  Sum_probs=87.5

Q ss_pred             CEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCCCCccHHHH
Q 025042           84 DAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEL  163 (259)
Q Consensus        84 k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~p~~~e~  163 (259)
                      ++++||+||||+++.........-..                             ..+.....+++.....++.||+.++
T Consensus        59 ~avVfDIDgTlldn~~y~~~~~~~~~-----------------------------~f~~~~w~~wv~~g~~~~~pg~~el  109 (260)
T 3pct_A           59 KAVVVDLDETMIDNSAYAGWQVQSGQ-----------------------------GFSPKTWTKWVDARQSAAIPGAVEF  109 (260)
T ss_dssp             EEEEECCBTTTEECHHHHHHHHHHTC-----------------------------CCCHHHHHHHHHTTCCEECTTHHHH
T ss_pred             CEEEEECCccCcCChhHHHhhcccCC-----------------------------CCCHHHHHHHHHcCCCCCCccHHHH
Confidence            59999999999997632111100000                             0122334556665557899999999


Q ss_pred             HHHHHHCCCcEEEEeCCccc----cHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC
Q 025042          164 VKKLKANNKNVYLISGGFRH----MINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA  239 (259)
Q Consensus       164 l~~Lk~~g~~v~ivTg~~~~----~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g  239 (259)
                      ++.|+++|++++++||....    .+...++.+|++  .++...+....              ....|....+.+.+. |
T Consensus       110 l~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~--~~~~~~Lilr~--------------~~~~K~~~r~~L~~~-g  172 (260)
T 3pct_A          110 SNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT--GVNDKTLLLKK--------------DKSNKSVRFKQVEDM-G  172 (260)
T ss_dssp             HHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC--CCSTTTEEEES--------------SCSSSHHHHHHHHTT-T
T ss_pred             HHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC--ccccceeEecC--------------CCCChHHHHHHHHhc-C
Confidence            99999999999999987654    677788999997  32221221100              125688888888875 5


Q ss_pred             CCeEEEEecCcccHHh
Q 025042          240 YKVLAMIGDGATDLEV  255 (259)
Q Consensus       240 ~~~v~~vGDg~ND~~a  255 (259)
                      ++.+++|||..+|+++
T Consensus       173 y~iv~~iGD~~~Dl~~  188 (260)
T 3pct_A          173 YDIVLFVGDNLNDFGD  188 (260)
T ss_dssp             CEEEEEEESSGGGGCG
T ss_pred             CCEEEEECCChHHcCc
Confidence            5789999999999987

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.21  E-value=7.2e-13  Score=110.25  Aligned_cols=91  Identities=11%  Similarity=0.026  Sum_probs=64.2

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR  235 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~  235 (259)
                      ++|++.++++.++ .|+++ ++|+............+|+.  .+|...-         .....+....+++|+..++.++
T Consensus       123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~--~~~~~~~---------~~~~~~~~~~~Kp~~~~~~~~~  189 (259)
T 2ho4_A          123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPG--PFVTALE---------YATDTKAMVVGKPEKTFFLEAL  189 (259)
T ss_dssp             BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSH--HHHHHHH---------HHHTCCCEECSTTSHHHHHHHG
T ss_pred             CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCc--HHHHHHH---------HHhCCCceEecCCCHHHHHHHH
Confidence            6789999999999 89998 88887666555444455553  2222000         0001112234678999999999


Q ss_pred             HHcCC--CeEEEEecCc-ccHHhhhcC
Q 025042          236 KAHAY--KVLAMIGDGA-TDLEVSIFI  259 (259)
Q Consensus       236 ~~~g~--~~v~~vGDg~-ND~~al~~v  259 (259)
                      +++|+  ++|+||||+. ||+.|++.+
T Consensus       190 ~~lgi~~~~~~~iGD~~~~Di~~a~~a  216 (259)
T 2ho4_A          190 RDADCAPEEAVMIGDDCRDDVDGAQNI  216 (259)
T ss_dssp             GGGTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred             HHcCCChHHEEEECCCcHHHHHHHHHC
Confidence            99998  8999999998 999998753

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.20  E-value=4.5e-11  Score=101.38  Aligned_cols=41  Identities=15%  Similarity=0.173  Sum_probs=35.8

Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +....+.+|+..++.+++++|+  +++++|||+.||++|++.+
T Consensus       204 ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~a  246 (283)
T 3dao_A          204 DCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNA  246 (283)
T ss_dssp             EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             EEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhC
Confidence            3445567899999999999998  8899999999999999864

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.18  E-value=8.3e-12  Score=101.74  Aligned_cols=89  Identities=9%  Similarity=0.095  Sum_probs=59.1

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      .+.|++.++++.|+++|++++++|+.....++.+++.+.    ++|.... ...+....        ..++++++.+.++
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~----~~f~~i~-~~~~~~~~--------~~~KP~p~~~~~~  154 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLA----DNFHIPA-TNMNPVIF--------AGDKPGQNTKSQW  154 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHH----HHTTCCT-TTBCCCEE--------CCCCTTCCCSHHH
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHH----HhcCccc-cccchhhh--------cCCCCCHHHHHHH
Confidence            357899999999999999999999997766555554421    1111100 00000000        1135566677888


Q ss_pred             HHHcCCCeEEEEecCcccHHhhhc
Q 025042          235 RKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       235 ~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      ++++|+  ++||||+.+|+.+++.
T Consensus       155 ~~~~g~--~l~VGDs~~Di~aA~~  176 (211)
T 2b82_A          155 LQDKNI--RIFYGDSDNDITAARD  176 (211)
T ss_dssp             HHHTTE--EEEEESSHHHHHHHHH
T ss_pred             HHHCCC--EEEEECCHHHHHHHHH
Confidence            888874  9999999999999875

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.15  E-value=2.2e-12  Score=103.35  Aligned_cols=74  Identities=12%  Similarity=0.138  Sum_probs=57.2

Q ss_pred             CCCCCccHHHHHHHHHHC-CCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          153 PPRLSPGIDELVKKLKAN-NKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~-g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ...++||+.++|+.|+++ |++++++|+.....++.+++.+|+ .+.++..                             
T Consensus        71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl-f~~i~~~-----------------------------  120 (193)
T 2i7d_A           71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW-VEQHLGP-----------------------------  120 (193)
T ss_dssp             TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH-HHHHHCH-----------------------------
T ss_pred             cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc-hhhhcCH-----------------------------
Confidence            357899999999999999 999999999999999999998876 2111110                             


Q ss_pred             HHHHHHcCC--CeEEEEecCccc----HHhhh
Q 025042          232 QQIRKAHAY--KVLAMIGDGATD----LEVSI  257 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~ND----~~al~  257 (259)
                       ..++++|+  ++++||||+.+|    +.+++
T Consensus       121 -~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~  151 (193)
T 2i7d_A          121 -QFVERIILTRDKTVVLGDLLIDDKDTVRGQE  151 (193)
T ss_dssp             -HHHTTEEECSCGGGBCCSEEEESSSCCCSSC
T ss_pred             -HHHHHcCCCcccEEEECCchhhCcHHHhhcc
Confidence             13444555  789999999999    76654

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.15  E-value=2e-12  Score=104.02  Aligned_cols=42  Identities=17%  Similarity=0.157  Sum_probs=38.3

Q ss_pred             CCCCccHHHHHHHHHHC-CCcEEEEeCCccccHHHHHHHcCCC
Q 025042          154 PRLSPGIDELVKKLKAN-NKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~-g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      ..++||+.++|+.|+++ |++++++|+..+..++..++.+|+.
T Consensus        74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~  116 (197)
T 1q92_A           74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWV  116 (197)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchH
Confidence            57899999999999999 9999999999998888888888875

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.13  E-value=3.9e-12  Score=106.03  Aligned_cols=39  Identities=15%  Similarity=0.051  Sum_probs=34.4

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCc-ccHHhhhcC
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGA-TDLEVSIFI  259 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~-ND~~al~~v  259 (259)
                      ...+++|+..++.+++++|+  ++|++|||+. ||++|++.+
T Consensus       186 ~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~a  227 (271)
T 2x4d_A          186 EVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRC  227 (271)
T ss_dssp             EEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred             eeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHC
Confidence            34568999999999999998  8999999998 999999753

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.08  E-value=7.3e-10  Score=93.90  Aligned_cols=39  Identities=15%  Similarity=0.290  Sum_probs=34.0

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ...+.+|..+++.+++++|+  +++++||||.||++|++.+
T Consensus       193 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~a  233 (282)
T 1rkq_A          193 LDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYA  233 (282)
T ss_dssp             EETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             cCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHC
Confidence            34456899999999999998  7999999999999999853

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.06  E-value=1.1e-10  Score=104.57  Aligned_cols=87  Identities=15%  Similarity=0.272  Sum_probs=66.3

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCc------------cccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGF------------RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSR  223 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~------------~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~  223 (259)
                      ++||+.++|+.|+++|++++|+|+..            ...++.+++.+|+..+.++...                ....
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~----------------~~~~  151 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATH----------------AGLN  151 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCEEEEECS----------------SSTT
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEEECC----------------CCCC
Confidence            68999999999999999999999954            2236778889998532222211                1123


Q ss_pred             CCChHHHHHHHHHHcC----C--CeEEEEecCc-----------------ccHHhhhc
Q 025042          224 SGGKAAAVQQIRKAHA----Y--KVLAMIGDGA-----------------TDLEVSIF  258 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g----~--~~v~~vGDg~-----------------ND~~al~~  258 (259)
                      .++++..+..+++++|    +  ++++||||+.                 +|+.+++.
T Consensus       152 ~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~  209 (416)
T 3zvl_A          152 RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALN  209 (416)
T ss_dssp             STTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHH
Confidence            5778899999999887    6  8999999997                 68887764

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.04  E-value=8.5e-10  Score=92.42  Aligned_cols=38  Identities=21%  Similarity=0.246  Sum_probs=33.8

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      ...+++|+..++.+++++|+  ++++||||+ .||++|++.
T Consensus       191 ~~~~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~  231 (271)
T 1vjr_A          191 LIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKN  231 (271)
T ss_dssp             EECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHH
Confidence            44568899999999999998  899999999 599999875

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.00  E-value=3.7e-10  Score=94.52  Aligned_cols=39  Identities=23%  Similarity=0.262  Sum_probs=34.0

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      ....+++|+..++.+++++|+  ++++||||+ .||++|++.
T Consensus       178 ~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~  219 (266)
T 3pdw_A          178 PVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGIN  219 (266)
T ss_dssp             CEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH
T ss_pred             ccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHH
Confidence            334567889999999999998  899999999 799999975

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=98.97  E-value=3.8e-09  Score=89.62  Aligned_cols=37  Identities=22%  Similarity=0.263  Sum_probs=33.0

Q ss_pred             CCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          223 RSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      .+.+|+..++.+++++|+  +++++|||+.||++|++.+
T Consensus       213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~a  251 (288)
T 1nrw_A          213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAA  251 (288)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHS
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHc
Confidence            345899999999999998  7999999999999999853

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.95  E-value=1.2e-09  Score=91.42  Aligned_cols=38  Identities=13%  Similarity=0.142  Sum_probs=33.6

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      ...+++|+..++.+++++|+  ++++||||+ .||+.|++.
T Consensus       183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~  223 (268)
T 3qgm_A          183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKA  223 (268)
T ss_dssp             EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH
T ss_pred             eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHH
Confidence            44578899999999999998  899999999 599999875

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=98.94  E-value=3.1e-10  Score=97.29  Aligned_cols=89  Identities=10%  Similarity=0.044  Sum_probs=59.6

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccH--H-HHHHHcC-CCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI--N-PIASVLG-IPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA  230 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~--~-~i~~~lg-i~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~  230 (259)
                      .++|++.++++.|++.|+ ++++|+......  . .+...+| +.  .+|...            ...+....+++|+..
T Consensus       156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~--~~~~~~------------~~~~~~~~~KP~~~~  220 (306)
T 2oyc_A          156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLA--AAVETA------------SGRQALVVGKPSPYM  220 (306)
T ss_dssp             CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHH--HHHHHH------------HTCCCEECSTTSTHH
T ss_pred             CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHH--HHHHHH------------hCCCceeeCCCCHHH
Confidence            457899999999998898 889998765433  1 1111111 10  111110            011112246789999


Q ss_pred             HHHHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          231 VQQIRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       231 v~~l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      ++.+++++|+  ++++||||+. ||+.|++.
T Consensus       221 ~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~  251 (306)
T 2oyc_A          221 FECITENFSIDPARTLMVGDRLETDILFGHR  251 (306)
T ss_dssp             HHHHHHHSCCCGGGEEEEESCTTTHHHHHHH
T ss_pred             HHHHHHHcCCChHHEEEECCCchHHHHHHHH
Confidence            9999999998  8999999996 99999874

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.93  E-value=1.3e-11  Score=103.42  Aligned_cols=41  Identities=17%  Similarity=0.313  Sum_probs=35.7

Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +....+.+|+..++.+++++|+  +++++|||+.||++|++.+
T Consensus       180 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~a  222 (261)
T 2rbk_A          180 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHA  222 (261)
T ss_dssp             EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             EecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHc
Confidence            3345677999999999999998  7999999999999999853

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=98.92  E-value=1.4e-09  Score=90.79  Aligned_cols=89  Identities=10%  Similarity=0.086  Sum_probs=57.2

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCcccc--HHH-HHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHM--INP-IASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA  230 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~--~~~-i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~  230 (259)
                      ..++|++.++++.|+ .|+++ ++|+.....  ... +.+..++.  .+|...+            ..+....+++++..
T Consensus       125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~--~~f~~~~------------~~~~~~~~KP~p~~  188 (264)
T 1yv9_A          125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVV--TFVETAT------------QTKPVYIGKPKAII  188 (264)
T ss_dssp             TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHH--HHHHHHH------------TCCCEECSTTSHHH
T ss_pred             CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHH--HHHHHHh------------CCCccccCCCCHHH
Confidence            357899999999997 88886 888876532  111 00111111  1111110            00111235778889


Q ss_pred             HHHHHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          231 VQQIRKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       231 v~~l~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      ++.+++++|+  ++++||||+ .||+.+++.
T Consensus       189 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~  219 (264)
T 1yv9_A          189 MERAIAHLGVEKEQVIMVGDNYETDIQSGIQ  219 (264)
T ss_dssp             HHHHHHHHCSCGGGEEEEESCTTTHHHHHHH
T ss_pred             HHHHHHHcCCCHHHEEEECCCcHHHHHHHHH
Confidence            9999999998  799999999 599999874

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=98.91  E-value=5e-09  Score=88.09  Aligned_cols=38  Identities=21%  Similarity=0.239  Sum_probs=34.0

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+.+|+.+++.+++++|+  +++++|||+.||++|++.+
T Consensus       187 ~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~a  226 (271)
T 1rlm_A          187 IPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMA  226 (271)
T ss_dssp             CTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHC
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHc
Confidence            3467899999999999998  7999999999999999863

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=98.89  E-value=4.1e-09  Score=88.17  Aligned_cols=38  Identities=18%  Similarity=0.159  Sum_probs=33.2

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      ...+++|+..++.+++++|+  ++++||||+ .||+.|++.
T Consensus       178 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~  218 (264)
T 3epr_A          178 VFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGIN  218 (264)
T ss_dssp             EECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHH
Confidence            34467889999999999998  899999999 699999875

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=98.88  E-value=5.6e-09  Score=86.86  Aligned_cols=40  Identities=13%  Similarity=0.077  Sum_probs=34.0

Q ss_pred             CCCcCCCChHHHHHHHHHHcCC---CeEEEEecCcccHHhhhcC
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY---KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~---~~v~~vGDg~ND~~al~~v  259 (259)
                      +... +.+|+.+++.+++.+|+   +++++||||.||++|++.+
T Consensus       173 ei~~-g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~a  215 (249)
T 2zos_A          173 TVHG-NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVV  215 (249)
T ss_dssp             EEEC-SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTS
T ss_pred             EEeC-CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhC
Confidence            3445 67899999999998654   7899999999999999864

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=98.86  E-value=9e-09  Score=85.89  Aligned_cols=39  Identities=21%  Similarity=0.267  Sum_probs=34.2

Q ss_pred             CCcCCCChHHHHHHHHHHcCC----CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY----KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~----~~v~~vGDg~ND~~al~~v  259 (259)
                      .... .+|+..++.+++++|+    +++++|||+.||++|++.+
T Consensus       171 i~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~a  213 (259)
T 3zx4_A          171 AAKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAV  213 (259)
T ss_dssp             EESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTS
T ss_pred             EcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhC
Confidence            3344 7999999999999998    6899999999999999864

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=98.84  E-value=2.1e-08  Score=84.12  Aligned_cols=38  Identities=18%  Similarity=0.274  Sum_probs=33.7

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+.+|+.+++.+++++|+  +++++|||+.||++|++.+
T Consensus       186 ~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~a  225 (268)
T 1nf2_A          186 PKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEA  225 (268)
T ss_dssp             CTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTC
T ss_pred             CCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHc
Confidence            3456899999999999998  7899999999999999863

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=98.79  E-value=4.1e-08  Score=82.79  Aligned_cols=40  Identities=25%  Similarity=0.235  Sum_probs=34.1

Q ss_pred             CCcCCCChHHHHHHHHHHcC-C--Ce--EEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHA-Y--KV--LAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g-~--~~--v~~vGDg~ND~~al~~v  259 (259)
                      ....+.+|+.+++.+++++| +  ++  +++|||+.||++|++.+
T Consensus       183 I~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~a  227 (275)
T 1xvi_A          183 VLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVM  227 (275)
T ss_dssp             EEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTS
T ss_pred             EecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhC
Confidence            34446689999999999988 6  67  99999999999999863

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=98.76  E-value=5.4e-10  Score=95.80  Aligned_cols=41  Identities=17%  Similarity=0.205  Sum_probs=35.6

Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +....+.+|+.+++.+++.+|+  +++++|||+.||++|++.+
T Consensus       217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~a  259 (301)
T 2b30_A          217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNF  259 (301)
T ss_dssp             EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSC
T ss_pred             EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHc
Confidence            3445567999999999999998  7999999999999999864

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=98.70  E-value=4.8e-09  Score=88.65  Aligned_cols=85  Identities=11%  Similarity=0.070  Sum_probs=55.9

Q ss_pred             cHHHHHHHHHHCCCcEEEEeCCccccH--H--HHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHH
Q 025042          159 GIDELVKKLKANNKNVYLISGGFRHMI--N--PIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~--~--~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l  234 (259)
                      ...++++.|+++|++ +++|+......  +  .+.+..++.  .+|...+.            .+....+++++..++..
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~--~~f~~~~~------------~~~~~~~KP~p~~~~~a  213 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVA--TMIESILG------------RRFIRFGKPDSQMFMFA  213 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHH--HHHHHHHC------------SCEEEESTTSSHHHHHH
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHH--HHHHHHhC------------CceeEecCCCHHHHHHH
Confidence            666777789999999 99998765544  2  111222332  22211110            00112357788899999


Q ss_pred             HHHc----CC--CeEEEEecCc-ccHHhhhc
Q 025042          235 RKAH----AY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       235 ~~~~----g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      ++++    |+  ++++||||+. +|+.+++.
T Consensus       214 ~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~  244 (284)
T 2hx1_A          214 YDMLRQKMEISKREILMVGDTLHTDILGGNK  244 (284)
T ss_dssp             HHHHHTTSCCCGGGEEEEESCTTTHHHHHHH
T ss_pred             HHHHhhccCCCcceEEEECCCcHHHHHHHHH
Confidence            9999    88  7999999995 99998864

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=98.67  E-value=2.4e-08  Score=78.59  Aligned_cols=27  Identities=22%  Similarity=0.473  Sum_probs=24.2

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCC
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGG  180 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~  180 (259)
                      ...++||+.++|+.|++. ++++++|+.
T Consensus        67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~   93 (180)
T 3bwv_A           67 NLDVMPHAQEVVKQLNEH-YDIYIATAA   93 (180)
T ss_dssp             SCCBCTTHHHHHHHHTTT-SEEEEEECC
T ss_pred             cCCCCcCHHHHHHHHHhc-CCEEEEeCC
Confidence            357899999999999985 999999997

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=98.60  E-value=2e-08  Score=88.78  Aligned_cols=102  Identities=13%  Similarity=0.002  Sum_probs=72.4

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeec-ceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFAN-QLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~-~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      .++||+.++|+.|+++|++++++|++.+..++.+++.+|+.  .+|.. .+...++....+.........++|++..+..
T Consensus       215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~--~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~  292 (384)
T 1qyi_A          215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL--PYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA  292 (384)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG--GGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred             CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCCh--HhcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence            67899999999999999999999999999999999999996  55541 1111000000000000001124677788888


Q ss_pred             HHHHcC--------------C--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHA--------------Y--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g--------------~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|              +  ++|+||||+.+|+.+++.
T Consensus       293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~  333 (384)
T 1qyi_A          293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK  333 (384)
T ss_dssp             HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHH
T ss_pred             HHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHH
Confidence            888877              5  799999999999998864

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=98.58  E-value=4.4e-08  Score=81.84  Aligned_cols=88  Identities=14%  Similarity=0.052  Sum_probs=55.3

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccH--HHHHHH-cCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI--NPIASV-LGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~--~~i~~~-lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      .++|++.++++.|+ +|+++ ++|+......  ..++.. .++.  ..|...+            ..+....+++++..+
T Consensus       130 ~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~--~~~~~~~------------~~~~~~~~KP~~~~~  193 (263)
T 1zjj_A          130 LTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSII--AALKVAT------------NVEPIIIGKPNEPMY  193 (263)
T ss_dssp             CBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHH--HHHHHHH------------CCCCEECSTTSHHHH
T ss_pred             CCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHH--HHHHHHh------------CCCccEecCCCHHHH
Confidence            56789999999999 88887 8888765433  111110 1111  1111110            001112357888999


Q ss_pred             HHHHHHcCCCeEEEEecCc-ccHHhhhc
Q 025042          232 QQIRKAHAYKVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~~~v~~vGDg~-ND~~al~~  258 (259)
                      +.++++...++++||||+. +|+.+++.
T Consensus       194 ~~~~~~~~~~~~~~VGD~~~~Di~~A~~  221 (263)
T 1zjj_A          194 EVVREMFPGEELWMVGDRLDTDIAFAKK  221 (263)
T ss_dssp             HHHHHHSTTCEEEEEESCTTTHHHHHHH
T ss_pred             HHHHHhCCcccEEEECCChHHHHHHHHH
Confidence            9888873338999999995 99998864

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.36  E-value=1.3e-06  Score=74.25  Aligned_cols=88  Identities=16%  Similarity=0.102  Sum_probs=62.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccH---HHHHHH--------cCCCCCcEeecceeecCCCceecccCCCCCc
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMI---NPIASV--------LGIPPENIFANQLLFKSSGEFLGFDANEPTS  222 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~---~~i~~~--------lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~  222 (259)
                      ..++||+.++|+.|+++|++++++||.....+   ..+++.        +|+..+.++..     ++        .    
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~--------~----  249 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQR-----EQ--------G----  249 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEEC-----CT--------T----
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCchheeec-----cC--------C----
Confidence            46799999999999999999999999876543   556666        78842222221     00        0    


Q ss_pred             CCCChHHHHHHHHHHcCC---CeEEEEecCcccHHhhhc
Q 025042          223 RSGGKAAAVQQIRKAHAY---KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~---~~v~~vGDg~ND~~al~~  258 (259)
                      .+++++..+..++++++.   +.++||||+.+|+.|++.
T Consensus       250 ~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~  288 (301)
T 1ltq_A          250 DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRR  288 (301)
T ss_dssp             CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHH
Confidence            134566776666666543   246899999999999875

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.83  E-value=0.00011  Score=54.19  Aligned_cols=29  Identities=3%  Similarity=-0.051  Sum_probs=25.0

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccc
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRH  183 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~  183 (259)
                      .+.++..+.++.++++|++++++||....
T Consensus        24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~   52 (126)
T 1xpj_A           24 LPRLDVIEQLREYHQLGFEIVISTARNMR   52 (126)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence            45688999999999999999999998654

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.81  E-value=3.6e-05  Score=58.18  Aligned_cols=40  Identities=18%  Similarity=0.018  Sum_probs=32.6

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCc---cccHHHHHHHcCCC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGF---RHMINPIASVLGIP  195 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~---~~~~~~i~~~lgi~  195 (259)
                      +.|++.++|+.++++|+.++++||..   ...+..+++++|++
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~   67 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE   67 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence            45789999999999999999999975   34455667788886

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.71  E-value=3.2e-05  Score=67.48  Aligned_cols=65  Identities=22%  Similarity=0.253  Sum_probs=45.9

Q ss_pred             HHHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCC
Q 025042           75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPP  154 (259)
Q Consensus        75 ~~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  154 (259)
                      +.++++++.++++||+||||+++.                                                        
T Consensus         5 ~~~~~~~~~~~~l~D~DGvl~~g~--------------------------------------------------------   28 (352)
T 3kc2_A            5 RFFQTTSKKIAFAFDIDGVLFRGK--------------------------------------------------------   28 (352)
T ss_dssp             -------CCEEEEECCBTTTEETT--------------------------------------------------------
T ss_pred             HHhhhhccCCEEEEECCCeeEcCC--------------------------------------------------------
Confidence            456677889999999999998732                                                        


Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCcccc----HHHHHHHcCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHM----INPIASVLGIP  195 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~----~~~i~~~lgi~  195 (259)
                      .+.|++.++++.|++.|++++++||+...+    ++.+.+.+|++
T Consensus        29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~   73 (352)
T 3kc2_A           29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD   73 (352)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence            245899999999999999999999875433    33444467875

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=97.59  E-value=3.6e-05  Score=63.42  Aligned_cols=37  Identities=19%  Similarity=0.224  Sum_probs=33.6

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ....+|+..++.+++++|+  +++++|||+.||++|++.
T Consensus       158 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~  196 (244)
T 1s2o_A          158 PQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFET  196 (244)
T ss_dssp             ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTS
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhc
Confidence            4467899999999999998  799999999999999985

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=97.46  E-value=4e-05  Score=62.94  Aligned_cols=36  Identities=22%  Similarity=0.209  Sum_probs=31.5

Q ss_pred             CcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          221 TSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      .....+|+.+++.+++++|   +++|||+.||++|++.+
T Consensus       155 ~~~~~~Kg~al~~l~~~~g---via~GD~~ND~~Ml~~a  190 (239)
T 1u02_A          155 RVPGVNKGSAIRSVRGERP---AIIAGDDATDEAAFEAN  190 (239)
T ss_dssp             ECTTCCHHHHHHHHHTTSC---EEEEESSHHHHHHHHTT
T ss_pred             EcCCCCHHHHHHHHHhhCC---eEEEeCCCccHHHHHHh
Confidence            3445689999999999986   99999999999999864

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=97.42  E-value=2.1e-05  Score=62.87  Aligned_cols=86  Identities=14%  Similarity=0.232  Sum_probs=61.4

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..+|||+.++|+++++. ++++|.|++.+..++.+++.+|..  .+|...+.- ++-..             .|..+++.
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~--~~f~~~l~r-d~~~~-------------~k~~~lK~  129 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW--GVFRARLFR-ESCVF-------------HRGNYVKD  129 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS--SCEEEEECG-GGCEE-------------ETTEEECC
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc--ccEEEEEEc-cccee-------------cCCceeee
Confidence            46799999999999998 999999999999999999999987  556543311 11000             11111222


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhh
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSI  257 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~  257 (259)
                       ++.+|.  ++|++|+|+.+++.+..
T Consensus       130 -L~~Lg~~~~~~vivDDs~~~~~~~~  154 (195)
T 2hhl_A          130 -LSRLGRELSKVIIVDNSPASYIFHP  154 (195)
T ss_dssp             -GGGSSSCGGGEEEEESCGGGGTTCG
T ss_pred             -HhHhCCChhHEEEEECCHHHhhhCc
Confidence             233455  79999999999987653

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=97.39  E-value=2.4e-05  Score=61.73  Aligned_cols=86  Identities=14%  Similarity=0.247  Sum_probs=60.8

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..+|||+.++|+++++. ++++|.|++.+..++.+++.++..  .+|...+.- ++-..             .|...++.
T Consensus        54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~--~~f~~~~~r-d~~~~-------------~k~~~~k~  116 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW--GAFRARLFR-ESCVF-------------HRGNYVKD  116 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT--CCEEEEECG-GGSEE-------------ETTEEECC
T ss_pred             EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC--CcEEEEEec-cCcee-------------cCCcEecc
Confidence            46799999999999997 999999999999999999999986  555543311 11100             01111111


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhh
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSI  257 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~  257 (259)
                      + +.+|.  ++|++|||+.+++.+..
T Consensus       117 L-~~Lg~~~~~~vivdDs~~~~~~~~  141 (181)
T 2ght_A          117 L-SRLGRDLRRVLILDNSPASYVFHP  141 (181)
T ss_dssp             G-GGTCSCGGGEEEECSCGGGGTTCT
T ss_pred             H-HHhCCCcceEEEEeCCHHHhccCc
Confidence            1 23355  79999999999987643

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.38  E-value=0.00021  Score=58.94  Aligned_cols=34  Identities=21%  Similarity=0.388  Sum_probs=27.3

Q ss_pred             cCCCChHHHHHHHHHHcCCCeEEEEec----CcccHHhhh
Q 025042          222 SRSGGKAAAVQQIRKAHAYKVLAMIGD----GATDLEVSI  257 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~~~v~~vGD----g~ND~~al~  257 (259)
                      ..+.+|+.+++.|++  ..+++++|||    |.||++|++
T Consensus       183 ~~gv~Kg~al~~L~~--~~~ev~afGD~~~~g~NDi~Ml~  220 (246)
T 3f9r_A          183 PVGWDKTYCLQFVED--DFEEIHFFGDKTQEGGNDYEIYT  220 (246)
T ss_dssp             ETTCSGGGGGGGTTT--TCSEEEEEESCCSTTSTTHHHHT
T ss_pred             eCCCCHHHHHHHHHc--CcccEEEEeCCCCCCCCCHHHHh
Confidence            335578888888877  3379999999    599999998

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=96.87  E-value=0.00071  Score=55.38  Aligned_cols=37  Identities=19%  Similarity=0.319  Sum_probs=29.8

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL  192 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l  192 (259)
                      .+.+...+.|++|+++| .++++||.....+..+++.+
T Consensus        23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l   59 (239)
T 1u02_A           23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD   59 (239)
T ss_dssp             CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS
T ss_pred             CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc
Confidence            35578888999999999 99999998877777766655

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.80  E-value=0.0012  Score=54.67  Aligned_cols=36  Identities=14%  Similarity=0.225  Sum_probs=30.6

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEec----CcccHHhhhc
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGD----GATDLEVSIF  258 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGD----g~ND~~al~~  258 (259)
                      ....+.+|+.+++.+   +|+  +++++|||    +.||++|++.
T Consensus       191 I~~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~  232 (262)
T 2fue_A          191 VFPEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFAD  232 (262)
T ss_dssp             EEETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHS
T ss_pred             EecCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhc
Confidence            344466899999999   576  89999999    9999999984

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.77  E-value=0.00066  Score=56.29  Aligned_cols=20  Identities=25%  Similarity=0.250  Sum_probs=14.0

Q ss_pred             hccCcCEEEEeCCCcccccc
Q 025042           79 LWRTADAVCFDVDSTVCVDE   98 (259)
Q Consensus        79 ~~~~~k~vvFD~DGTLt~~~   98 (259)
                      +..++++|+||+||||++.+
T Consensus         9 ~~~~~kli~~DlDGTLl~~~   28 (262)
T 2fue_A            9 RRKERVLCLFDVDGTLTPAR   28 (262)
T ss_dssp             ----CEEEEEESBTTTBSTT
T ss_pred             cccCeEEEEEeCccCCCCCC
Confidence            44568999999999998743

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.64  E-value=0.002  Score=52.65  Aligned_cols=36  Identities=19%  Similarity=0.236  Sum_probs=28.5

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEec----CcccHHhhhc
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGD----GATDLEVSIF  258 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGD----g~ND~~al~~  258 (259)
                      ....+.+|+.+++.+   +|+  +++++|||    +.||++|++.
T Consensus       182 I~~~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~  223 (246)
T 2amy_A          182 VFPDGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTD  223 (246)
T ss_dssp             EEETTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHC
T ss_pred             EecCCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHh
Confidence            344566899999999   576  89999999    9999999984

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.50  E-value=0.00042  Score=56.82  Aligned_cols=17  Identities=29%  Similarity=0.368  Sum_probs=14.5

Q ss_pred             cCcCEEEEeCCCccccc
Q 025042           81 RTADAVCFDVDSTVCVD   97 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~   97 (259)
                      .++++++||+||||++.
T Consensus         4 ~~~kli~~DlDGTLl~~   20 (246)
T 2amy_A            4 PGPALCLFDVDGTLTAP   20 (246)
T ss_dssp             CCSEEEEEESBTTTBCT
T ss_pred             CCceEEEEECCCCcCCC
Confidence            35789999999999864

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=96.20  E-value=0.0008  Score=55.43  Aligned_cols=17  Identities=29%  Similarity=0.346  Sum_probs=14.4

Q ss_pred             CcCEEEEeCCCcccccc
Q 025042           82 TADAVCFDVDSTVCVDE   98 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~   98 (259)
                      ++|+|+||+||||++.+
T Consensus         3 ~~kli~~DlDGTLl~~~   19 (246)
T 3f9r_A            3 KRVLLLFDVDGTLTPPR   19 (246)
T ss_dssp             CSEEEEECSBTTTBSTT
T ss_pred             CceEEEEeCcCCcCCCC
Confidence            47899999999998753

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=95.72  E-value=0.0034  Score=51.39  Aligned_cols=14  Identities=29%  Similarity=0.283  Sum_probs=12.2

Q ss_pred             EEEEeCCCcccccc
Q 025042           85 AVCFDVDSTVCVDE   98 (259)
Q Consensus        85 ~vvFD~DGTLt~~~   98 (259)
                      +++||+||||++.+
T Consensus         5 li~~DlDGTLl~~~   18 (244)
T 1s2o_A            5 LLISDLDNTWVGDQ   18 (244)
T ss_dssp             EEEECTBTTTBSCH
T ss_pred             EEEEeCCCCCcCCH
Confidence            89999999998743

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=94.84  E-value=0.052  Score=49.53  Aligned_cols=39  Identities=15%  Similarity=0.211  Sum_probs=35.1

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc-CC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL-GI  194 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l-gi  194 (259)
                      ...|+..++|+.||+.| +++++|++....++.+++.+ |+
T Consensus       246 ~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~  285 (555)
T 2jc9_A          246 VKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDF  285 (555)
T ss_dssp             CCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCS
T ss_pred             CCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCC
Confidence            34578999999999999 99999999999999999987 75

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=94.37  E-value=0.0095  Score=51.01  Aligned_cols=40  Identities=15%  Similarity=0.257  Sum_probs=36.1

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      ..||++.+||+++.+ .+.++|.|.+....+..+++.++..
T Consensus       164 ~~RP~l~eFL~~l~~-~yeivIfTas~~~ya~~vld~Ld~~  203 (320)
T 3shq_A          164 LMRPYLHEFLTSAYE-DYDIVIWSATSMRWIEEKMRLLGVA  203 (320)
T ss_dssp             HBCTTHHHHHHHHHH-HEEEEEECSSCHHHHHHHHHHTTCT
T ss_pred             EeCCCHHHHHHHHHh-CCEEEEEcCCcHHHHHHHHHHhCCC
Confidence            368999999999985 5889999999999999999999865

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=90.22  E-value=0.095  Score=45.74  Aligned_cols=48  Identities=13%  Similarity=0.385  Sum_probs=40.5

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecc
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQ  203 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~  203 (259)
                      ..+|||+.++|+.+. .++.++|.|.+.+..++.+++.++... .+|...
T Consensus        74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~-~~f~~r  121 (372)
T 3ef0_A           74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTG-KLFQDR  121 (372)
T ss_dssp             EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTS-CSSSSC
T ss_pred             EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCC-ceeeeE
Confidence            568999999999998 679999999999999999999998751 245533

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=87.59  E-value=0.36  Score=38.32  Aligned_cols=41  Identities=22%  Similarity=0.253  Sum_probs=37.4

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      ...|||+.++|+.+. .++.++|.|.+.+..++.+++.++..
T Consensus        58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~   98 (204)
T 3qle_A           58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPI   98 (204)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTT
T ss_pred             EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCC
Confidence            357999999999998 67999999999999999999999874

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=86.65  E-value=0.84  Score=40.91  Aligned_cols=35  Identities=9%  Similarity=0.133  Sum_probs=32.0

Q ss_pred             CccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH
Q 025042          157 SPGIDELVKKLKANNKNVYLISGGFRHMINPIASV  191 (259)
Q Consensus       157 ~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~  191 (259)
                      -|....+|+.||++|.++.++|++.-..+..+++.
T Consensus       188 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y  222 (470)
T 4g63_A          188 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDY  222 (470)
T ss_dssp             CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHH
T ss_pred             CHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHh
Confidence            48899999999999999999999999999888875

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=84.30  E-value=2.6  Score=34.08  Aligned_cols=38  Identities=21%  Similarity=0.337  Sum_probs=31.4

Q ss_pred             ccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH---cCCC
Q 025042          158 PGIDELVKKLKANNKNVYLISGGFRHMINPIASV---LGIP  195 (259)
Q Consensus       158 p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~---lgi~  195 (259)
                      |++.++++.++++|++++++||........+.++   +|++
T Consensus        20 ~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~   60 (263)
T 1zjj_A           20 PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID   60 (263)
T ss_dssp             TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence            7899999999999999999999887666666554   6774

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=82.31  E-value=0.3  Score=43.47  Aligned_cols=41  Identities=12%  Similarity=0.349  Sum_probs=37.3

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      ...|||+.+||+++. ..+.++|.|.+.+..+..+++.++-.
T Consensus        82 V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~LDp~  122 (442)
T 3ef1_A           82 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPT  122 (442)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHHCTT
T ss_pred             EEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhccC
Confidence            568999999999998 56899999999999999999999865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	259
d1nnla_	217	c.108.1.4 (A:) Phosphoserine phosphatase {Human (H	4e-43
d2feaa1	226	c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio	4e-21
d2bdua1	291	c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III	6e-20
d1rkua_	206	c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona	1e-14
d1j97a_	210	c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon	5e-14

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (362), Expect = 4e-43
 Identities = 96/180 (53%), Positives = 131/180 (72%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct: 2   ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 61

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGI 194
           L+L +PS  QVQ  + ++PP L+PGI ELV +L+  N  V+LISGGFR ++  +AS L I
Sbjct: 62  LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 121

Query: 195 PPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
           P  N+FAN+L F  +GE+ GFD  +PT+ SGGK   ++ +++   +K + MIGDGATD+E
Sbjct: 122 PATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDME 181

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

 Score = 86.6 bits (213), Expect = 4e-21
 Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 4/171 (2%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           +  D D T+ +++ I  + +               +  ++  +E +     L   SL + 
Sbjct: 7   IICDFDGTITMNDNIINIMKTFA-PPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEE 65

Query: 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLL 205
                    ++  G  E V  +  +    Y+ISGG    + P+   +    + I+ N   
Sbjct: 66  ITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVE-KDRIYCNHAS 124

Query: 206 FKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAH--AYKVLAMIGDGATDLE 254
           F +    + +  +   + S         +        + + MIGD  TD+E
Sbjct: 125 FDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVE 175

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.6 bits (209), Expect = 6e-20
 Identities = 29/200 (14%), Positives = 60/200 (30%), Gaps = 30/200 (15%)

Query: 85  AVCFDVDSTVCVDEGIDELAEFCG----AGKAVAE------------WTARAMGGSVPFE 128
            +  D D T+       +    C       K V +            + A  +   +  E
Sbjct: 39  QIITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTVE 98

Query: 129 EALAA----------RLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLIS 178
           E               L       +++++ +      L  G +    KL+ +   V++ S
Sbjct: 99  EKFPYMVEWYTKSHGLLIEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFS 158

Query: 179 GGFRHMINPIASVLGIPPEN--IFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV--QQI 234
            G   ++  +    G+   N  + +N + F  +G   GF        +    A       
Sbjct: 159 AGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYF 218

Query: 235 RKAHAYKVLAMIGDGATDLE 254
            +      + ++GD   DL 
Sbjct: 219 SQLKDNSNIILLGDSQGDLR 238

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 68.3 bits (166), Expect = 1e-14
 Identities = 26/169 (15%), Positives = 43/169 (25%), Gaps = 14/169 (8%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
            C D++  + V E     AE  G      +           ++  +  RL +      ++
Sbjct: 5   ACLDLEGVL-VPEIWIAFAEKTGI-----DALKATTRDIPDYDVLMKQRLRILDEHGLKL 58

Query: 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLL 205
            D  E                       V ++S  F     P+   LG P   +  ++L 
Sbjct: 59  GDIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFP--TLLCHKL- 115

Query: 206 FKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
                E    D                 I     Y  +   GD   D  
Sbjct: 116 -----EIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTT 159

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 66.8 bits (161), Expect = 5e-14
 Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 3/170 (1%)

Query: 85  AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ 144
            + FD DST+  +E IDE+A   G  + V + T  AM G + FE++L  R+SL K    +
Sbjct: 6   LILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIE 65

Query: 145 VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQL 204
             +   KR    + G +E +K+LK     V ++SGGF   +N I     +  +  FAN+L
Sbjct: 66  KVEKAIKRITP-TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK--LGLDYAFANRL 122

Query: 205 LFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 254
           + K        +       + G+        +    +    +GDGA D+ 
Sbjct: 123 IVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDIS 172

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	259
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.97
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.88
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.81
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.71
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.7
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.69
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.68
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	99.68
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	99.67
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.66
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.64
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.63
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	99.6
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.59
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.58
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.56
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.51
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.51
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.48
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.48
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.47
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.47
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.47
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.45
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.41
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.41
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.39
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	99.36
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	99.35
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.33
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	99.3
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.26
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	99.25
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.25
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.23
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	99.22
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.2
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	99.19
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.18
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	99.14
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.12
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	98.97
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	98.92
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	98.9
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	98.89
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	98.88
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	98.83
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	98.76
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	98.7
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	98.67
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	98.61
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	98.41
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.35
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.1
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.67
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.27
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	94.15
d1wpga4	472	Calcium ATPase, transmembrane domain M {Rabbit (Or	93.22
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	88.76
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	84.2

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.3e-30  Score=208.74  Aligned_cols=184  Identities=52%  Similarity=0.885  Sum_probs=155.5

Q ss_pred             HHHhccCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHHHHHhCCCC
Q 025042           76 VLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPR  155 (259)
Q Consensus        76 ~~e~~~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  155 (259)
                      ..+.+++.++|+||+||||++.++++.+...++.+.++..++++++.+.+++.+.+..+...+++....+.+.+......
T Consensus         3 ~~~~~~~~~aV~FD~DGTLi~~e~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (217)
T d1nnla_           3 LRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPH   82 (217)
T ss_dssp             HHHHHHHCSEEEEETBTTTBSSCHHHHHHHHTTCTTTC------------CHHHHHHHHHHHHCCCHHHHHHHHHHSCCC
T ss_pred             hhHhhCCCCEEEEcCccccCCccHHHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHHhhccc
Confidence            45677889999999999999999999999988888777778888888999999999998888888887777777766678


Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIR  235 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~  235 (259)
                      ++||+.+++++|+++|++++|+||+....++++++.+|++..+++++.+.++.+|.+++.....+...+..|..+++.++
T Consensus        83 l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~~  162 (217)
T d1nnla_          83 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLK  162 (217)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHHH
Confidence            99999999999999999999999999999999999999986678999999999999999888888788889999999999


Q ss_pred             HHcCCCeEEEEecCcccHHhhhcC
Q 025042          236 KAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       236 ~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      .++++++++|||||.||++|++.+
T Consensus       163 ~~~~~~~~~~vGDs~~Di~~~~~a  186 (217)
T d1nnla_         163 EKFHFKKIIMIGDGATDMEACPPA  186 (217)
T ss_dssp             HHHCCSCEEEEESSHHHHTTTTTS
T ss_pred             hccCccccEEEEeCHhhHHHHHhC
Confidence            888878999999999999999864

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.88  E-value=1.8e-22  Score=164.13  Aligned_cols=175  Identities=16%  Similarity=0.291  Sum_probs=135.4

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC-HHHHHHHHHhCCCCCCccH
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQDFLEKRPPRLSPGI  160 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~p~~  160 (259)
                      +..+|+||+||||+++++...+.+.++.. ....+...+..+..++.+.+..+....... .+......... .+++|++
T Consensus         3 ~k~lVifD~DGTL~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~pg~   80 (226)
T d2feaa1           3 RKPFIICDFDGTITMNDNIINIMKTFAPP-EWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLED-AKIREGF   80 (226)
T ss_dssp             CCEEEEECCTTTTBSSCHHHHHHHHHSCT-HHHHHHHHHHTTSSCHHHHHHHHHTTSBGGGHHHHHHHHHHH-CCBCTTH
T ss_pred             CCeEEEEeCCCCCcCchHHHHHHHHHCcc-hHHHHHHHHHcCcccHHHHHHHHHHHhccccHHHHHHHHHhc-cchhHHH
Confidence            44689999999999999888888877643 445677777788888888888776665433 23333333332 5689999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC
Q 025042          161 DELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY  240 (259)
Q Consensus       161 ~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~  240 (259)
                      .++++.|+++|++++++|++.+..++.+++++|+. +.++++.+.+++++....+....+.....+|+..+..++++++.
T Consensus        81 ~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~-~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~  159 (226)
T d2feaa1          81 REFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSE  159 (226)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHHHHHCC
T ss_pred             HHHHHHHHhcccccccCCcchhhhHHHHHHHcCCc-cceeeeeEEEeCCcceeccccccccccccCCHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999986 36778888887777666655555555555676666777776666


Q ss_pred             --CeEEEEecCcccHHhhhcC
Q 025042          241 --KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 --~~v~~vGDg~ND~~al~~v  259 (259)
                        ++|+|||||.||++|++.+
T Consensus       160 ~~~~~i~iGDs~~Dl~~a~~A  180 (226)
T d2feaa1         160 PNQYIIMIGDSVTDVEAAKLS  180 (226)
T ss_dssp             TTCEEEEEECCGGGHHHHHTC
T ss_pred             CCceEEEEeCchhhHHHHHHC
Confidence              8999999999999999753

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.81  E-value=4.9e-19  Score=140.87  Aligned_cols=173  Identities=30%  Similarity=0.443  Sum_probs=131.4

Q ss_pred             cCcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHH-HHHHhCCCCCCcc
Q 025042           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQ-DFLEKRPPRLSPG  159 (259)
Q Consensus        81 ~~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~p~  159 (259)
                      ++.|+|+||+||||+++++++.+++..+.+..+..+...+........+..........+...... .....  ..+.++
T Consensus         2 ~kkKlv~FDlDGTL~d~es~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   79 (210)
T d1j97a_           2 KKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKR--ITPTEG   79 (210)
T ss_dssp             CCCCEEEECCCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHT--CCBCTT
T ss_pred             CCCeEEEEeCCCCcCCchHHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHHhhhHHHHHHHHhhh--hhhhhh
Confidence            357999999999999999999999988887777777777666666666665555555544433332 33333  468899


Q ss_pred             HHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcC
Q 025042          160 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHA  239 (259)
Q Consensus       160 ~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g  239 (259)
                      +.+.++.++.+|..++++|+.....+.....+.+..  .++...+..+ ++....... .....+.+|...+..++++++
T Consensus        80 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  155 (210)
T d1j97a_          80 AEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD--YAFANRLIVK-DGKLTGDVE-GEVLKENAKGEILEKIAKIEG  155 (210)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEE-TTEEEEEEE-CSSCSTTHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCEEEeecccccccccchhhccchh--hhhhhhhccc-ccccccccc-ccccccccccchhhhHHHHhc
Confidence            999999999999999999999999999999999887  6666655443 333332222 233456789999999999988


Q ss_pred             C--CeEEEEecCcccHHhhhcC
Q 025042          240 Y--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       240 ~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +  +++++||||.||++|++.+
T Consensus       156 ~~~~~~i~iGDs~nDi~m~~~a  177 (210)
T d1j97a_         156 INLEDTVAVGDGANDISMFKKA  177 (210)
T ss_dssp             CCGGGEEEEESSGGGHHHHHHC
T ss_pred             ccccceEEecCCcChHHHHHHC
Confidence            7  7999999999999999864

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=2e-17  Score=133.01  Aligned_cols=91  Identities=16%  Similarity=0.122  Sum_probs=76.9

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|++|+++|++++++|++.+..++.+++.+|+.  ++|...+..+            ....++++++.++.
T Consensus        87 ~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~--~~F~~i~~~~------------~~~~~Kp~~~~~~~  152 (218)
T d1te2a_          87 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR--DSFDALASAE------------KLPYSKPHPQVYLD  152 (218)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG--GGCSEEEECT------------TSSCCTTSTHHHHH
T ss_pred             ccccchHHHHHHHhhhcccccccccccccccccccccccccc--cccccccccc------------ccccchhhHHHHHH
Confidence            457899999999999999999999999999999999999997  6665543221            11236788899999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|+  ++++||||+.+|+.+++.
T Consensus       153 ~~~~l~~~~~~~l~igD~~~di~aA~~  179 (218)
T d1te2a_         153 CAAKLGVDPLTCVALEDSVNGMIASKA  179 (218)
T ss_dssp             HHHHHTSCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHcCCCchhcEEEeeCHHHHHHHHH
Confidence            9999998  899999999999999875

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.70  E-value=6.1e-17  Score=128.24  Aligned_cols=159  Identities=18%  Similarity=0.284  Sum_probs=109.0

Q ss_pred             CcCEEEEeCCCcccccchHHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCC---HHHHHHHHHhCCCCCCc
Q 025042           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS---LSQVQDFLEKRPPRLSP  158 (259)
Q Consensus        82 ~~k~vvFD~DGTLt~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~p  158 (259)
                      ++|+|+||+||||++ +.+..+++..+...     .....++..++.+.+...+..+++.   ...+....  ......+
T Consensus         1 dmkli~fDlDGTLl~-e~~~~~a~~~Gi~~-----~~~tgR~~~~~~~~~~~~v~ll~~~~~~~~~~~~~~--~~~~~~~   72 (206)
T d1rkua_           1 DMEIACLDLEGVLVP-EIWIAFAEKTGIDA-----LKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVI--ATLKPLE   72 (206)
T ss_dssp             CCEEEEEESBTTTBC-CHHHHHHHHHTCGG-----GGCCTTTCCCHHHHHHHHHHHHHHTTCCHHHHHHHH--TTCCCCT
T ss_pred             CcEEEEEcCccchHH-HHHHHHHHHcCCHH-----HHHHCCCCCCHHHHHHHHHHHHHhCCCceehhhhhh--hhccccc
Confidence            368999999999997 56777766666422     2233456688888888877766532   22222222  2356788


Q ss_pred             cHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHc
Q 025042          159 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAH  238 (259)
Q Consensus       159 ~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~  238 (259)
                      +....++.++ .+...+++|++...........++++  ..+.+.+.+...+.......        .|....+.+++++
T Consensus        73 ~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~  141 (206)
T d1rkua_          73 GAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQL--------RQKDPKRQSVIAF  141 (206)
T ss_dssp             THHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCC--CEEEEEEEECTTSCEEEEEC--------CSSSHHHHHHHHH
T ss_pred             hHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCc--hhhcceeeeecccccccccc--------cchhhHHHHHHHh
Confidence            9988888775 67889999999999999999999987  67777776655444332221        2222233333333


Q ss_pred             CC--CeEEEEecCcccHHhhhcC
Q 025042          239 AY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       239 g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      |+  ++|++||||.||++|++++
T Consensus       142 ~i~~~eviaiGDg~NDi~Ml~~A  164 (206)
T d1rkua_         142 KSLYYRVIAAGDSYNDTTMLSEA  164 (206)
T ss_dssp             HHTTCEEEEEECSSTTHHHHHHS
T ss_pred             cccccceEEecCCccCHHHHHhC
Confidence            33  8999999999999999864

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.69  E-value=1.4e-16  Score=126.86  Aligned_cols=158  Identities=15%  Similarity=0.090  Sum_probs=101.3

Q ss_pred             CEEEEeCCCcccccch-----HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcCCCHHHHHH----HHHh--C
Q 025042           84 DAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQD----FLEK--R  152 (259)
Q Consensus        84 k~vvFD~DGTLt~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----~~~~--~  152 (259)
                      ++++||+||||+++..     +.......+..............  ....+.+...........+.+..    +...  .
T Consensus         2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFK--YSVQDLLVRVAEDRNLDVEVLNQVRAQSLAEKNA   79 (204)
T ss_dssp             CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH--SCHHHHHHHHHHHHTCCHHHHHHHHHHHHTTCGG
T ss_pred             EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhcc--cccccccccccchhhhhHHHHHHHHHHHHHhhcc
Confidence            6899999999988542     23333334433222222222211  12233333222222222222222    2222  2


Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|+.|+++|++++++|+... .+..+++++|+.  .+|...+..            +....+++|++.++
T Consensus        80 ~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~--~~f~~i~~s------------~~~~~~Kp~~~~~~  144 (204)
T d2go7a1          80 QVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE--SYFTEILTS------------QSGFVRKPSPEAAT  144 (204)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG--GGEEEEECG------------GGCCCCTTSSHHHH
T ss_pred             cCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc--ccccccccc------------ccccccchhHHHHH
Confidence            357889999999999999999999998765 456688999997  666543211            11124678999999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+++++|+  ++|+||||+.+|+.+++.
T Consensus       145 ~~~~~~~~~p~~~l~VgD~~~Di~~A~~  172 (204)
T d2go7a1         145 YLLDKYQLNSDNTYYIGDRTLDVEFAQN  172 (204)
T ss_dssp             HHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHHhCCCCceEEEEeCCHHHHHHHHH
Confidence            99999998  899999999999999874

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.68  E-value=6.7e-17  Score=129.93  Aligned_cols=92  Identities=20%  Similarity=0.285  Sum_probs=76.8

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++|++|++.|++++++|++.+..++.+++++|+.  ++|...+..            ......++|+...+
T Consensus        93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~--~~f~~~~~~------------~~~~~~kp~p~~~~  158 (224)
T d2hsza1          93 ISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID--HLFSEMLGG------------QSLPEIKPHPAPFY  158 (224)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG--GGCSEEECT------------TTSSSCTTSSHHHH
T ss_pred             ccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCch--hhccccccc------------cccccccccchhhH
Confidence            4678999999999999999999999999999999999999997  556543211            11233577888999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+++++|+  ++++||||+.+|+.+++.
T Consensus       159 ~~~~~~~~~~~~~~~igD~~~Di~~A~~  186 (224)
T d2hsza1         159 YLCGKFGLYPKQILFVGDSQNDIFAAHS  186 (224)
T ss_dssp             HHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHHhhhhhhccchhcCcHHHHHHHHH
Confidence            99999888  899999999999999864

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.68  E-value=5.3e-16  Score=130.17  Aligned_cols=193  Identities=13%  Similarity=0.203  Sum_probs=127.3

Q ss_pred             cccCCCCCCCHHHHHhc--------cCcCEEEEeCCCcccccc-------hHHHHHHHh-cCchhH----HHHHHHH---
Q 025042           64 LGRSENTLPSKEVLQLW--------RTADAVCFDVDSTVCVDE-------GIDELAEFC-GAGKAV----AEWTARA---  120 (259)
Q Consensus        64 ~~~~g~~v~~~~~~e~~--------~~~k~vvFD~DGTLt~~~-------~~~~l~~~~-~~~~~~----~~~~~~~---  120 (259)
                      ..+..+.+|.+..++..        ++.-.|++|||||||..+       +.+-+.+.. ...+..    ..+...|   
T Consensus        10 l~~~~v~i~d~~~v~~~i~~~~~~g~~klqVisDFD~Tit~~~~~~~~~~s~~~i~~~~~~~~e~~~~~~~~l~~~y~p~   89 (291)
T d2bdua1          10 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQIITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAI   89 (291)
T ss_dssp             GGSTTEECSCHHHHHHHHHHHHHHTGGGEEEEECCTTTTBCSEETTEECCCHHHHHHTSTTSCHHHHHHHHHHHHHHHHH
T ss_pred             hccCcEEECCHHHHHHHHHHHHhcChhhEEEEecCCCcccccccCCcccchhHHHHhhCCCCCHHHHHHHHHHHhhhccc
Confidence            33445677776665542        123347889999998643       233333332 222222    2333333   


Q ss_pred             -cCCCCcHHHHHHHHHhh-------c---CCCHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHH
Q 025042          121 -MGGSVPFEEALAARLSL-------F---KPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIA  189 (259)
Q Consensus       121 -~~~~~~~~~~~~~~~~~-------~---~~~~~~i~~~~~~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~  189 (259)
                       ....+++.+.......+       +   .-..+.+.+.+......+|||+.++++.|+++|++++++||+....+++++
T Consensus        90 E~d~~~s~~ek~~~m~ew~~~~~~ll~~~~l~~~~i~~~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl  169 (291)
T d2bdua1          90 EVDPVLTVEEKFPYMVEWYTKSHGLLIEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI  169 (291)
T ss_dssp             HTCSSSCHHHHHHHHHHHHHHHHHHHHHHCCBGGGHHHHHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH
Confidence             23345555544433221       1   224566777777766789999999999999999999999999999999999


Q ss_pred             HHcCCCCC--cEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHH----HcCCCeEEEEecCcccHHhhhc
Q 025042          190 SVLGIPPE--NIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRK----AHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       190 ~~lgi~~~--~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~----~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      +++|++..  +++++.+.+++++...+...+.  .....|...+.....    ..+..+++++|||.||+.|+..
T Consensus       170 ~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~--i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g  242 (291)
T d2bdua1         170 RQAGVYHSNVKVVSNFMDFDENGVLKGFKGEL--IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADG  242 (291)
T ss_dssp             HHTTCCBTTEEEEEECEEECTTSBEEEECSSC--CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTT
T ss_pred             HHcCCCccCceEEeeEEEEeCCeeEeeccCCc--cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhC
Confidence            99999743  4899999998777666554432  234567665543322    1122689999999999999864

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.67  E-value=5e-17  Score=121.39  Aligned_cols=81  Identities=22%  Similarity=0.294  Sum_probs=73.9

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      +.+||++.+.++.|++.|++++|+|||+..+++.+++++|++  ++|++.                   .|+.|...+++
T Consensus        20 D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--~v~~~~-------------------~p~~k~~~v~~   78 (135)
T d2b8ea1          20 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEV-------------------LPHQKSEEVKK   78 (135)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSC-------------------CHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh--hhcccc-------------------chhHHHHHHHH
Confidence            578999999999999999999999999999999999999997  788763                   47899999998


Q ss_pred             HHHHcCCCeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      ++..   ..|+|+|||.||+||++.
T Consensus        79 ~q~~---~~v~~vGDg~nD~~aL~~  100 (135)
T d2b8ea1          79 LQAK---EVVAFVGDGINDAPALAQ  100 (135)
T ss_dssp             HTTT---SCEEEEECSSSSHHHHHH
T ss_pred             HHcC---CEEEEEeCCCCcHHHHHh
Confidence            8764   689999999999999975

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.66  E-value=6.4e-16  Score=121.61  Aligned_cols=91  Identities=16%  Similarity=0.236  Sum_probs=72.7

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|++|+++|++++++|+...... ..++++++.  ++|...+..        .    ....++|+++.++
T Consensus        77 ~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~--~~fd~i~~~--------~----~~~~~KP~p~~~~  141 (187)
T d2fi1a1          77 HPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIA--AYFTEVVTS--------S----SGFKRKPNPESML  141 (187)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCG--GGEEEEECG--------G----GCCCCTTSCHHHH
T ss_pred             cCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccc--ccccccccc--------c----cccccCCCHHHHH
Confidence            567899999999999999999999999876655 468899986  566543211        1    1123567788999


Q ss_pred             HHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      ..++++++++++||||+.+|+.+++.
T Consensus       142 ~~~~~~~~~~~l~vgDs~~Di~aA~~  167 (187)
T d2fi1a1         142 YLREKYQISSGLVIGDRPIDIEAGQA  167 (187)
T ss_dssp             HHHHHTTCSSEEEEESSHHHHHHHHH
T ss_pred             HHHHHcCCCCeEEEeCCHHHHHHHHH
Confidence            99999999889999999999999875

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.64  E-value=6.4e-17  Score=129.21  Aligned_cols=91  Identities=14%  Similarity=0.139  Sum_probs=74.3

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.++|+.|++ +++++++|++....++.+++++|+.  .+|......+            ....++|++..++
T Consensus        80 ~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~--~~f~~i~~~~------------~~~~~KP~p~~~~  144 (207)
T d2hdoa1          80 QIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFM--MRMAVTISAD------------DTPKRKPDPLPLL  144 (207)
T ss_dssp             GCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGG--GGEEEEECGG------------GSSCCTTSSHHHH
T ss_pred             ccccccchhhhhhhhcc-ccccccccccccccccccccccccc--cccccccccc------------ccccchhhhhhhc
Confidence            35688999999999975 6899999999999999999999996  5565432211            1124678999999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..++++|+  ++++||||+.+|+.+++.
T Consensus       145 ~~~~~~~~~~~~~l~VgDs~~Di~~a~~  172 (207)
T d2hdoa1         145 TALEKVNVAPQNALFIGDSVSDEQTAQA  172 (207)
T ss_dssp             HHHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred             ccccceeeeccceeEecCCHHHHHHHHH
Confidence            99999998  799999999999998764

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.63  E-value=6.4e-16  Score=123.24  Aligned_cols=89  Identities=20%  Similarity=0.235  Sum_probs=74.0

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++++.++.++ +++++|++....++.+++++|+.  .+|...+..+              ..+++|++.++
T Consensus        82 ~~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~--~~fd~v~~~~--------------~~~~~~p~~~~  144 (210)
T d2ah5a1          82 EAQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIH--HFFDGIYGSS--------------PEAPHKADVIH  144 (210)
T ss_dssp             SCEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCG--GGCSEEEEEC--------------SSCCSHHHHHH
T ss_pred             cccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccc--cccccccccc--------------ccccccccccc
Confidence            4578999999999998775 89999999999999999999997  5554433211              12568999999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+++++|+  ++++||||+.+|+.+++.
T Consensus       145 ~~~~~~~~~~~~~v~VGDs~~Di~aa~~  172 (210)
T d2ah5a1         145 QALQTHQLAPEQAIIIGDTKFDMLGARE  172 (210)
T ss_dssp             HHHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred             hhhhhhhcccccceeecCCHHHHHHHHH
Confidence            99999998  899999999999999864

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.60  E-value=1.6e-15  Score=117.47  Aligned_cols=103  Identities=17%  Similarity=0.157  Sum_probs=74.9

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCc--Eeeccee---ec--CC---CceecccCCCCCcC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPEN--IFANQLL---FK--SS---GEFLGFDANEPTSR  223 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~--~~~~~l~---~~--~~---~~~~g~~~~~~~~~  223 (259)
                      +++||+++++++.|++.|++++|+|||+..++..+++++|+...+  +....+.   ++  ..   ..............
T Consensus        19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~   98 (168)
T d1wpga2          19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE   98 (168)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred             CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence            578999999999999999999999999999999999999995321  1000000   00  00   00000011112356


Q ss_pred             CCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          224 SGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                      |++|...++.+++. | +.|+|+|||.||.+|++.
T Consensus        99 p~~K~~lv~~l~~~-g-~~Va~vGDG~nD~~AL~~  131 (168)
T d1wpga2          99 PSHKSKIVEYLQSY-D-EITAMTGDGVNDAPALKK  131 (168)
T ss_dssp             HHHHHHHHHHHHHT-T-CCEEEEECSGGGHHHHHH
T ss_pred             hhHHHHHHHHHHhc-c-cceeEEecCCCCHHHHHh
Confidence            88999999999888 6 699999999999999985

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.59  E-value=5.1e-15  Score=121.75  Aligned_cols=92  Identities=12%  Similarity=0.133  Sum_probs=73.4

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|++|+++|++++++||..+..++.+++.+|+.  .+|...+.       .+    +....++|.++.+..
T Consensus        98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~--~~f~d~~~-------~~----d~~~~~KP~p~~~~~  164 (257)
T d1swva_          98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ--GYKPDFLV-------TP----DDVPAGRPYPWMCYK  164 (257)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT--TCCCSCCB-------CG----GGSSCCTTSSHHHHH
T ss_pred             CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc--cccccccc-------cc----ccccccccChHHHHH
Confidence            478999999999999999999999999999999999999886  44432221       11    111235677788888


Q ss_pred             HHHHcCC---CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY---KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~---~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|+   ++|+||||+.+|+.+++.
T Consensus       165 ~~~~l~~~p~~~~v~VgDs~~Di~aA~~  192 (257)
T d1swva_         165 NAMELGVYPMNHMIKVGDTVSDMKEGRN  192 (257)
T ss_dssp             HHHHHTCCSGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHhCCCCcceEEEEeCChhhHHHHHH
Confidence            8888886   679999999999999875

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.58  E-value=1.4e-14  Score=116.23  Aligned_cols=89  Identities=15%  Similarity=0.091  Sum_probs=71.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..+.||+.++++.|++.|+.++++|+..  ..+..++.+|+.  .+|...+.            .+....++|+++.++.
T Consensus        90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~~~l~--~~f~~i~~------------~~~~~~~KP~~~~~~~  153 (221)
T d1o08a_          90 ADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLERMNLT--GYFDAIAD------------PAEVAASKPAPDIFIA  153 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHTTCG--GGCSEECC------------TTTSSSCTTSTHHHHH
T ss_pred             ccccCCceeccccccccccceEEEeecc--hhhHHHHhhccc--cccccccc------------cccccccccChHHHHH
Confidence            4689999999999999999999999863  467888999986  55544321            1112345778899999


Q ss_pred             HHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++++|+  ++|+||||+.+|+.+++.
T Consensus       154 ~l~~~~i~~~~~l~VgD~~~di~~A~~  180 (221)
T d1o08a_         154 AAHAVGVAPSESIGLEDSQAGIQAIKD  180 (221)
T ss_dssp             HHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHcCCCCceEEEEecCHHHHHHHHH
Confidence            9999998  789999999999999874

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.56  E-value=5.4e-15  Score=119.41  Aligned_cols=91  Identities=19%  Similarity=0.285  Sum_probs=66.9

Q ss_pred             CCCCccHHHHHHHHHHCC-CcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH-H
Q 025042          154 PRLSPGIDELVKKLKANN-KNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA-V  231 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g-~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~-v  231 (259)
                      ..++||+.++|+.|+++| ++++++|++....+..+++.+|+.  ++|.....            .+....+++++.. +
T Consensus        90 ~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~--~~fd~i~~------------~~~~~~~k~~p~~~~  155 (228)
T d2hcfa1          90 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID--HYFPFGAF------------ADDALDRNELPHIAL  155 (228)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS--TTCSCEEC------------TTTCSSGGGHHHHHH
T ss_pred             ceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccc--cccccccc------------ccccccccchhHHHH
Confidence            467899999999999987 789999999999999999999997  55543221            1111223455554 3


Q ss_pred             HHHHHHc--CC--CeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAH--AY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~--g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..+.+..  ++  ++++||||+.+|+.+++.
T Consensus       156 ~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~  186 (228)
T d2hcfa1         156 ERARRMTGANYSPSQIVIIGDTEHDIRCARE  186 (228)
T ss_dssp             HHHHHHHCCCCCGGGEEEEESSHHHHHHHHT
T ss_pred             HHhhhhcccCCChhHheeecCChHHHHHHHH
Confidence            3444432  44  799999999999999875

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.9e-13  Score=110.57  Aligned_cols=93  Identities=10%  Similarity=0.041  Sum_probs=74.8

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++||+.+++++|+++|++++++|++.........+.+|+.  .++.......++           ....++++..+.
T Consensus       125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~--~~~~~~~~~~d~-----------~~~~KP~p~~~~  191 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG--DILELVDGHFDT-----------KIGHKVESESYR  191 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB--CCGGGCSEEECG-----------GGCCTTCHHHHH
T ss_pred             ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc--hhhhhcceeecc-----------ccccCCCcHHHH
Confidence            4568999999999999999999999999999999999999885  333221111000           123588999999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..++++|+  ++|+||||+.+|+.+++.
T Consensus       192 ~~~~~~~~~p~~~l~vgD~~~dv~aA~~  219 (253)
T d1zs9a1         192 KIADSIGCSTNNILFLTDVTREASAAEE  219 (253)
T ss_dssp             HHHHHHTSCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHHhCCCcCcEEEEeCCHHHHHHHHH
Confidence            99999998  899999999999999875

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=1.7e-15  Score=117.01  Aligned_cols=86  Identities=13%  Similarity=0.163  Sum_probs=71.0

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCcc-ccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFR-HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~-~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ..++||+.++|++|+++|+++.++|+..+ ..++.+.+.+++.  .++....                 ..+++|.+.+.
T Consensus        45 ~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~--~~~~~~~-----------------~~~kp~~~~~~  105 (164)
T d1u7pa_          45 IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLG--KYFIQRE-----------------IYPGSKVTHFE  105 (164)
T ss_dssp             ECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCG--GGCSEEE-----------------ESSSCHHHHHH
T ss_pred             cccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccc--ccceeee-----------------cccCCChHHHH
Confidence            47899999999999999999999998765 4566678888885  4443321                 13568999999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ++.+++|+  ++++||||+.+|+.+++.
T Consensus       106 ~~~~~~~~~~~~~l~igD~~~di~aA~~  133 (164)
T d1u7pa_         106 RLHHKTGVPFSQMVFFDDENRNIIDVGR  133 (164)
T ss_dssp             HHHHHHCCCGGGEEEEESCHHHHHHHHT
T ss_pred             HHHHHhCCChHHEEEEcCCHHHHHHHHH
Confidence            99999998  899999999999999875

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.48  E-value=1.2e-13  Score=111.51  Aligned_cols=90  Identities=19%  Similarity=0.189  Sum_probs=72.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQ  233 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~  233 (259)
                      ..++||+.++|+.|+ .|++++++|++.....+.+++.+|+.  ++|...+..+        .    ...++|+++.++.
T Consensus        99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~--~~fd~i~~s~--------~----~~~~KP~~~~~~~  163 (230)
T d1x42a1          99 GELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIK--DLFDSITTSE--------E----AGFFKPHPRIFEL  163 (230)
T ss_dssp             CCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCG--GGCSEEEEHH--------H----HTBCTTSHHHHHH
T ss_pred             CcccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccc--cccccccccc--------c----ccccchhhHHHHH
Confidence            568999999999997 47999999999999999999999996  5554332111        1    1135778899999


Q ss_pred             HHHHcCC--CeEEEEecC-cccHHhhhc
Q 025042          234 IRKAHAY--KVLAMIGDG-ATDLEVSIF  258 (259)
Q Consensus       234 l~~~~g~--~~v~~vGDg-~ND~~al~~  258 (259)
                      ..+++|+  ++++||||+ .+|+.+++.
T Consensus       164 ~~~~l~~~p~~~l~vgD~~~~Di~~A~~  191 (230)
T d1x42a1         164 ALKKAGVKGEEAVYVGDNPVKDCGGSKN  191 (230)
T ss_dssp             HHHHHTCCGGGEEEEESCTTTTHHHHHT
T ss_pred             HHhhhcccccccceeecCcHhHHHHHHH
Confidence            9999998  889999998 589998764

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.48  E-value=4.3e-13  Score=107.04  Aligned_cols=92  Identities=13%  Similarity=0.161  Sum_probs=74.3

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++++.+++.|++++++|+......+.+.+.+++.  ..|...+..+        .    ...+++.+..++
T Consensus        91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~--~~fd~~~~s~--------~----~~~~KP~p~~~~  156 (220)
T d1zrna_          91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR--DGFDHLLSVD--------P----VQVYKPDNRVYE  156 (220)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG--GGCSEEEESG--------G----GTCCTTSHHHHH
T ss_pred             cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccc--ccccceeeee--------e----eeccccHHHHHH
Confidence            4578899999999999999999999999999999999988885  4443322111        1    123567788999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..++++|+  ++|+||||+.+|+.+++.
T Consensus       157 ~~~~~~g~~p~e~l~VgD~~~Di~~A~~  184 (220)
T d1zrna_         157 LAEQALGLDRSAILFVASNAWDATGARY  184 (220)
T ss_dssp             HHHHHHTSCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHHhCCCCceEEEEecChHhHHHHHH
Confidence            99999998  899999999999998864

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.47  E-value=8.8e-14  Score=111.49  Aligned_cols=160  Identities=18%  Similarity=0.199  Sum_probs=101.3

Q ss_pred             cCEEEEeCCCcccccch-----HHHHHHHhcCchhHHHHHHHHcCCCCcHHHHHHHHHhhcC--CCHHHHH---HHHH--
Q 025042           83 ADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQ---DFLE--  150 (259)
Q Consensus        83 ~k~vvFD~DGTLt~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~---~~~~--  150 (259)
                      +|+|+||+||||++++.     +.......+..........++..  .+..+..........  ...+.++   .+..  
T Consensus         2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAG--MTWKNILLQVESEASIPLSASLLDKSEKLLDMR   79 (222)
T ss_dssp             CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTT--CCHHHHHHHHHHHHCCCCCTHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhh--hccccccccccccccccccccchhHHHHHHHHH
Confidence            68999999999998653     22333344433333344343322  344444433333222  1222211   1111  


Q ss_pred             -hCCCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042          151 -KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA  229 (259)
Q Consensus       151 -~~~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~  229 (259)
                       .....+.|++.++++.|+.   +.+++|+.....++.+++++|+.  .+|...+.       .+....  ...++|+++
T Consensus        80 ~~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~--~~f~~~~~-------~~~~~~--~~~~KP~~~  145 (222)
T d2fdra1          80 LERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLK--PYFAPHIY-------SAKDLG--ADRVKPKPD  145 (222)
T ss_dssp             HHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCG--GGTTTCEE-------EHHHHC--TTCCTTSSH
T ss_pred             hhhccchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccc--cccceeec-------cccccc--ccccccCHH
Confidence             1236789999999987754   55799999999999999999997  55544321       111111  123577888


Q ss_pred             HHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          230 AVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       230 ~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+...++++|+  ++++||||+.+|+.+++.
T Consensus       146 ~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~  176 (222)
T d2fdra1         146 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARA  176 (222)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHhhCCCCceEEEEcCCHHHHHHHHH
Confidence            99999999998  799999999999999875

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.47  E-value=9e-14  Score=112.07  Aligned_cols=38  Identities=24%  Similarity=0.374  Sum_probs=33.8

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+.+|..+++++++++|+  ++|++||||.||++|++.+
T Consensus       147 ~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a  186 (225)
T d1l6ra_         147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLP  186 (225)
T ss_dssp             ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSS
T ss_pred             CCccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHC
Confidence            3456899999999999998  7899999999999999864

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.47  E-value=2.4e-13  Score=108.93  Aligned_cols=39  Identities=21%  Similarity=0.299  Sum_probs=34.5

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ...+.+|..+++.+++++|+  +++++||||.||++|++.+
T Consensus       147 ~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~a  187 (230)
T d1wr8a_         147 KKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVV  187 (230)
T ss_dssp             ECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHS
T ss_pred             eeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHC
Confidence            34567899999999999998  8899999999999999853

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=4.3e-13  Score=109.15  Aligned_cols=91  Identities=12%  Similarity=0.153  Sum_probs=72.4

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++|+.|++ |++++++|++.....+..++++|+.  .+|...+..+        .    ...++|.+..++
T Consensus       107 ~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~--~~fd~i~~s~--------~----~~~~KP~p~~~~  171 (247)
T d2gfha1         107 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ--SYFDAIVIGG--------E----QKEEKPAPSIFY  171 (247)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG--GGCSEEEEGG--------G----SSSCTTCHHHHH
T ss_pred             cCccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccc--cccccccccc--------c----cccchhhhhhHH
Confidence            35789999999999985 7899999999999999999999986  5554332111        1    123567789999


Q ss_pred             HHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      .+++++|+  ++++||||+. +|+.+++.
T Consensus       172 ~~~~~~~~~~~~~l~iGD~~~~Di~~A~~  200 (247)
T d2gfha1         172 HCCDLLGVQPGDCVMVGDTLETDIQGGLN  200 (247)
T ss_dssp             HHHHHHTCCGGGEEEEESCTTTHHHHHHH
T ss_pred             HHHHHhhcCHHhcceeccChHhHHHHHHH
Confidence            99999998  7999999996 89998764

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.41  E-value=1.9e-12  Score=104.84  Aligned_cols=90  Identities=9%  Similarity=0.093  Sum_probs=70.5

Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQ  232 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~  232 (259)
                      ...++|++.++|++|+  ++.+.++|++....++.+.+.+++.  .+|...+..        ...    ...+|.+++++
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~--~~fd~v~~s--------~~~----~~~KP~p~~f~  154 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT--DSFDAVISV--------DAK----RVFKPHPDSYA  154 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG--GGCSEEEEG--------GGG----TCCTTSHHHHH
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccc--ccccccccc--------ccc----cccCccHHHHH
Confidence            4678999999999885  6788999999999999999999986  444432211        111    12466778999


Q ss_pred             HHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          233 QIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       233 ~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ..++++|+  ++|+||||+.+|+.+++.
T Consensus       155 ~a~~~lg~~p~e~l~VgD~~~di~~A~~  182 (245)
T d1qq5a_         155 LVEEVLGVTPAEVLFVSSNGFDVGGAKN  182 (245)
T ss_dssp             HHHHHHCCCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHHhCCChhhEEEEeCCHHHHHHHHH
Confidence            99999999  899999999999998864

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=2.6e-13  Score=105.46  Aligned_cols=160  Identities=16%  Similarity=0.096  Sum_probs=97.7

Q ss_pred             EEEEeCCCcccccch---HHHHHHHhcCchhH-------HHHHHHHcCCCCcHHHHHHHHHhhcC--CCHHHHHHHHHhC
Q 025042           85 AVCFDVDSTVCVDEG---IDELAEFCGAGKAV-------AEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQDFLEKR  152 (259)
Q Consensus        85 ~vvFD~DGTLt~~~~---~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~  152 (259)
                      +++||+||||++...   ...+....+.....       .........+.....+..........  .............
T Consensus         2 l~iFDlDgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (197)
T d2b0ca1           2 LYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAV   81 (197)
T ss_dssp             EEEECCBTTTEEEETHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHHHHHHHTC
T ss_pred             EEEEeCCCCcCcCHHHHHHHHHHHHhCCCHHHHHHHHhcccHHHHHHhccccHHHHHHHHhhhhccchhHHHHHHHHHHh
Confidence            478999999987542   22333333332110       01122223334444444433333322  2233333333343


Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHc-CCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHH
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVL-GIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAV  231 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~l-gi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v  231 (259)
                      ...++++..+++..++..|+.+.++|+......+.....+ ++.  .+|...+..        ..    ...++++++..
T Consensus        82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~--~~fd~v~~s--------~~----~~~~Kp~~~~~  147 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR--DAADHIYLS--------QD----LGMRKPEARIY  147 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH--HHCSEEEEH--------HH----HTCCTTCHHHH
T ss_pred             ccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccch--hhccceeec--------cc----ccccccchHHH
Confidence            3568899999999999999999999988777666555544 443  222221110        00    12357899999


Q ss_pred             HHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          232 QQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       232 ~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      +.+++++|+  ++|+||||+.+|+.+++.
T Consensus       148 ~~~~~~~~~~~~~~l~vgDs~~di~~A~~  176 (197)
T d2b0ca1         148 QHVLQAEGFSPSDTVFFDDNADNIEGANQ  176 (197)
T ss_dssp             HHHHHHHTCCGGGEEEEESCHHHHHHHHT
T ss_pred             HHHHHhcCCCCCeEEEEeCCHHHHHHHHH
Confidence            999999998  899999999999999875

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.39  E-value=8.4e-13  Score=109.54  Aligned_cols=36  Identities=19%  Similarity=0.227  Sum_probs=32.8

Q ss_pred             CCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          224 SGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      +.+|+.+++.+++++|+  +++++||||.||++|++.+
T Consensus       211 ~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a  248 (285)
T d1nrwa_         211 KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAA  248 (285)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHS
T ss_pred             cchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhC
Confidence            45899999999999998  7999999999999999864

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=99.36  E-value=2.3e-13  Score=105.98  Aligned_cols=74  Identities=24%  Similarity=0.225  Sum_probs=65.3

Q ss_pred             HHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHHHHHHHHHcCC--
Q 025042          163 LVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAY--  240 (259)
Q Consensus       163 ~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~v~~l~~~~g~--  240 (259)
                      .++.|+..|+.+.++|+.....++..++.+++.  ..+..                     ..+|...++.+++++|+  
T Consensus        40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~--~~~~~---------------------~~~K~~~l~~~~~~~~i~~   96 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLG---------------------KLEKETACFDLMKQAGVTA   96 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEES---------------------CSCHHHHHHHHHHHHTCCG
T ss_pred             HHHHHhhhcEEEEEecCCchhHHHHHHhhhccc--ccccc---------------------cccHHHHHHHHHHHhcCCc
Confidence            578889999999999999999999999999986  44443                     36899999999999998  


Q ss_pred             CeEEEEecCcccHHhhhcC
Q 025042          241 KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       241 ~~v~~vGDg~ND~~al~~v  259 (259)
                      ++|+||||+.||+||++.+
T Consensus        97 ~~v~~vGDd~nDl~~l~~~  115 (177)
T d1k1ea_          97 EQTAYIGDDSVDLPAFAAC  115 (177)
T ss_dssp             GGEEEEECSGGGHHHHHHS
T ss_pred             ceeEEecCCccHHHHHhhC
Confidence            8999999999999999864

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=99.35  E-value=4.2e-12  Score=104.54  Aligned_cols=37  Identities=16%  Similarity=0.313  Sum_probs=33.1

Q ss_pred             CCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          223 RSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       223 ~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      .+.+|..+++.+++++++  +++++||||.||++|++.+
T Consensus       194 ~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~  232 (271)
T d1rkqa_         194 KRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYA  232 (271)
T ss_dssp             TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             CCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhC
Confidence            345799999999999988  7899999999999999864

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.9e-12  Score=102.77  Aligned_cols=91  Identities=4%  Similarity=-0.010  Sum_probs=65.9

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHH----HcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIAS----VLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA  229 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~----~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~  229 (259)
                      ..++|++.++++.|+++|++++++|+......+...+    ..++.  .+|...+        .+..    ...++++++
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~--~~fd~i~--------~s~~----~~~~KP~~~  163 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELK--MHFDFLI--------ESCQ----VGMVKPEPQ  163 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHH--TTSSEEE--------EHHH----HTCCTTCHH
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChH--hhccEEE--------eccc----cccchhHHH
Confidence            4688999999999999999999999876665543332    23332  2221111        0001    123578999


Q ss_pred             HHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          230 AVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       230 ~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .+++.++.+|+  ++++||||+..|+.+++.
T Consensus       164 ~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~  194 (225)
T d1zd3a1         164 IYKFLLDTLKASPSEVVFLDDIGANLKPARD  194 (225)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESCHHHHHHHHH
T ss_pred             HHHHHhhhcccCccceeEEecCHHHHHHHHH
Confidence            99999999998  899999999999998864

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=99.30  E-value=2.9e-12  Score=105.50  Aligned_cols=38  Identities=21%  Similarity=0.239  Sum_probs=33.6

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+.+|..+++.+++++|+  +++++||||.||++|++.+
T Consensus       186 p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~a  225 (269)
T d1rlma_         186 IPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMA  225 (269)
T ss_dssp             CTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHC
T ss_pred             cCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhC
Confidence            3456799999999999998  7899999999999999853

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=1.8e-12  Score=103.40  Aligned_cols=91  Identities=5%  Similarity=-0.017  Sum_probs=67.1

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCcccc----HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHH
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHM----INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAA  229 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~----~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~  229 (259)
                      ..++|++.++|++|+++|++++++|+.....    .......+|+.  ++|...+..+        .    ....+++++
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~--~~fd~i~~s~--------~----~~~~KP~p~  161 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELS--QHFDFLIESC--------Q----VGMIKPEPQ  161 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHG--GGCSEEEEHH--------H----HSCCTTCHH
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChH--hhhceeeehh--------h----ccCCCCChH
Confidence            4689999999999999999999999754433    34445556664  4443222110        0    112578899


Q ss_pred             HHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          230 AVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       230 ~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      .++..++++|+  ++++||||+.+|+.+++.
T Consensus       162 ~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~  192 (222)
T d1cr6a1         162 IYNFLLDTLKAKPNEVVFLDDFGSNLKPARD  192 (222)
T ss_dssp             HHHHHHHHHTSCTTSEEEEESSSTTTHHHHH
T ss_pred             HHHHHHHHhCCCcceEEEEECCHHHHHHHHH
Confidence            99999999998  899999999999998874

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=99.25  E-value=4.9e-12  Score=104.40  Aligned_cols=36  Identities=14%  Similarity=0.213  Sum_probs=32.9

Q ss_pred             CCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          224 SGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+|..+++.+++.+++  +++++||||.||++|++.+
T Consensus       205 ~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a  242 (283)
T d2b30a1         205 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNF  242 (283)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSC
T ss_pred             cchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhC
Confidence            45899999999999998  7999999999999999864

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.25  E-value=1.2e-11  Score=99.73  Aligned_cols=38  Identities=13%  Similarity=0.102  Sum_probs=32.4

Q ss_pred             cCCCChHHHHHHHHHHcC-C--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHA-Y--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g-~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+|..+++.++++++ +  +++++||||.||++|++++
T Consensus       175 ~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a  215 (243)
T d1wzca1         175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVV  215 (243)
T ss_dssp             ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTS
T ss_pred             hhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcC
Confidence            345689999999999874 4  6999999999999999864

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.23  E-value=1.1e-11  Score=99.02  Aligned_cols=102  Identities=12%  Similarity=0.034  Sum_probs=65.8

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCc------------c---ccHHHHHHHcCCCCCcEeecceeecCCCceecccCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGF------------R---HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN  218 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~------------~---~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~  218 (259)
                      ..++||+.++|++|+++|++++++|+..            .   ......++..|+..+.++.....-  ++..  ....
T Consensus        47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~--~~~~--~~~~  122 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHE--AGVG--PLAI  122 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCT--TCCS--TTCC
T ss_pred             eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccc--cccc--cccc
Confidence            3688999999999999999999999732            1   112233444554322333332111  0000  0000


Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ......+|++..+.+..+++++  ++++||||+.+|+.+++.+
T Consensus       123 ~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~A  165 (209)
T d2o2xa1         123 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRA  165 (209)
T ss_dssp             SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHT
T ss_pred             cccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHC
Confidence            1111237788899999999998  8999999999999998753

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=5.1e-11  Score=95.04  Aligned_cols=40  Identities=18%  Similarity=0.127  Sum_probs=34.2

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      +.+.+.+++++|+++|+.++++||.....+..+.+.+++.
T Consensus        22 i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~   61 (232)
T d1xvia_          22 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ   61 (232)
T ss_dssp             SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence            3456788899999999999999999888888898888875

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.20  E-value=8.1e-13  Score=101.36  Aligned_cols=94  Identities=17%  Similarity=0.217  Sum_probs=61.2

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCcc---------------ccHHHHHHHcCCCCCcEeecceeecCCCceecccCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN  218 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---------------~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~  218 (259)
                      ..++||+.++|+.|+++|++++++|+...               ......+...|+..+.+|.... .      ..    
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~-~------~~----   97 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPH-L------PA----   97 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECC-C------GG----
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccc-c------cc----
Confidence            46889999999999999999999997431               1123344555664223222210 0      00    


Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ......+|.+..+.++++++|+  ++++||||+.+|+.|++.
T Consensus        98 ~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~  139 (161)
T d2fpwa1          98 DECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAEN  139 (161)
T ss_dssp             GCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHH
T ss_pred             ccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHH
Confidence            0011246788889999999998  899999999999999874

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.19  E-value=2.6e-11  Score=99.39  Aligned_cols=38  Identities=16%  Similarity=0.308  Sum_probs=33.8

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ..+.+|..+++.+++++|+  +++++||||.||++|++.+
T Consensus       182 p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a  221 (260)
T d2rbka1         182 AKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHA  221 (260)
T ss_dssp             STTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred             eCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhC
Confidence            3446899999999999998  8999999999999999864

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.18  E-value=5.8e-11  Score=92.51  Aligned_cols=101  Identities=10%  Similarity=0.090  Sum_probs=63.4

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccc---------------cHHHHHHHcCCCCCcEeecceeecCCCceecccCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRH---------------MINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN  218 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~---------------~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~  218 (259)
                      .++.||+.++|+.|+++|++++++|+...-               .........|+..+.++...-.  .++....  ..
T Consensus        26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~--p~~~~~~--~~  101 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHH--PQGSVEE--FR  101 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCB--TTCSSGG--GB
T ss_pred             eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeecccc--ccccccc--cc
Confidence            368899999999999999999999986321               1112223334432122211000  0000000  00


Q ss_pred             CCCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhc
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ......+|++..+....+++++  ++++||||+.+|+.|++.
T Consensus       102 ~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~  143 (182)
T d2gmwa1         102 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVA  143 (182)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHH
T ss_pred             ccccccCCccccccchhhhcccccccccccCCCHHHHHHHHH
Confidence            1112247888899999999998  899999999999999864

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=99.14  E-value=1.5e-10  Score=95.20  Aligned_cols=39  Identities=18%  Similarity=0.267  Sum_probs=34.2

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      .....+|..+++.+++++|+  +++++||||.||++|++.+
T Consensus       185 ~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~  225 (267)
T d1nf2a_         185 VPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEA  225 (267)
T ss_dssp             ECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTC
T ss_pred             cCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhC
Confidence            34456899999999999998  7899999999999999864

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.12  E-value=2e-12  Score=97.34  Aligned_cols=30  Identities=20%  Similarity=0.203  Sum_probs=26.8

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccc
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRH  183 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~  183 (259)
                      ..++|++.++++.|+++|++++++|+....
T Consensus        35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~   64 (149)
T d1ltqa1          35 DVINPMVVELSKMYALMGYQIVVVSGRESG   64 (149)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred             CccCHHHHHHHHHHHhccCeEEEEecCcHH
Confidence            468999999999999999999999997543

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.97  E-value=4.6e-10  Score=90.76  Aligned_cols=40  Identities=18%  Similarity=0.163  Sum_probs=35.2

Q ss_pred             CCcCCCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ....+.+|..+++.+++++|+  +++++||||.||++|++.+
T Consensus       156 i~~~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~  197 (244)
T d1s2oa1         156 LLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETS  197 (244)
T ss_dssp             EEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSS
T ss_pred             EEeCccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhC
Confidence            344567899999999999998  7899999999999999864

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.92  E-value=2.5e-10  Score=99.00  Aligned_cols=101  Identities=12%  Similarity=0.040  Sum_probs=66.5

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCceecc-cCCCCCcCCCChHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGF-DANEPTSRSGGKAAAVQQI  234 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~-~~~~~~~~~~~K~~~v~~l  234 (259)
                      ++|++.++|+.|+++|++++|+||+++.+++.+++++|+.  .+|.....+..+....+. .........++.+..+...
T Consensus       216 p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~--~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~  293 (380)
T d1qyia_         216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL--PYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (380)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG--GGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--ccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence            5679999999999999999999999999999999999996  555433222111111100 0111111123334444444


Q ss_pred             HHH--------------cCC--CeEEEEecCcccHHhhhc
Q 025042          235 RKA--------------HAY--KVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       235 ~~~--------------~g~--~~v~~vGDg~ND~~al~~  258 (259)
                      ...              ++.  ++|+|+|||.||++|++.
T Consensus       294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~  333 (380)
T d1qyia_         294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK  333 (380)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHH
T ss_pred             HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHH
Confidence            322              122  689999999999999975

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.90  E-value=1e-09  Score=86.98  Aligned_cols=39  Identities=23%  Similarity=0.181  Sum_probs=32.7

Q ss_pred             CCCCcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhcC
Q 025042          218 NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       218 ~~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~v  259 (259)
                      .+....+.+|..+++.++++   +++++||||.||++|++.+
T Consensus       151 idi~p~g~~Kg~al~~l~~~---~~~i~~GDs~ND~~Mf~~~  189 (229)
T d1u02a_         151 IELRVPGVNKGSAIRSVRGE---RPAIIAGDDATDEAAFEAN  189 (229)
T ss_dssp             EEEECTTCCHHHHHHHHHTT---SCEEEEESSHHHHHHHHTT
T ss_pred             EEEecCCCCHHHHHHHHhcc---ccceeecCCCChHHHHhcc
Confidence            34555667899999999876   6899999999999999864

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.89  E-value=3.9e-09  Score=83.31  Aligned_cols=36  Identities=8%  Similarity=0.147  Sum_probs=32.5

Q ss_pred             CCChHHHHHHHHHHcCC--CeEEEEecCcccHHhhhcC
Q 025042          224 SGGKAAAVQQIRKAHAY--KVLAMIGDGATDLEVSIFI  259 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~--~~v~~vGDg~ND~~al~~v  259 (259)
                      ++|.+++.+..++++|+  ++|+||||+.+|+.+++.+
T Consensus       158 ~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~a  195 (225)
T d2g80a1         158 KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGV  195 (225)
T ss_dssp             CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTT
T ss_pred             CCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHc
Confidence            57789999999999999  8999999999999998764

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=98.88  E-value=7.4e-09  Score=84.11  Aligned_cols=38  Identities=11%  Similarity=0.067  Sum_probs=32.2

Q ss_pred             cCCCChHHHHHHHHHHcCC--CeEEEEecCc-ccHHhhhcC
Q 025042          222 SRSGGKAAAVQQIRKAHAY--KVLAMIGDGA-TDLEVSIFI  259 (259)
Q Consensus       222 ~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~-ND~~al~~v  259 (259)
                      ..++|++..++.+++++|+  ++++||||+. +|+.+++.+
T Consensus       173 ~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~a  213 (250)
T d2c4na1         173 YVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQA  213 (250)
T ss_dssp             ECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHT
T ss_pred             hcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHC
Confidence            3457788999999999998  8999999996 599998753

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.83  E-value=8.7e-09  Score=83.72  Aligned_cols=38  Identities=21%  Similarity=0.225  Sum_probs=32.5

Q ss_pred             CcCCCChHHHHHHHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          221 TSRSGGKAAAVQQIRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       221 ~~~~~~K~~~v~~l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      ...++|++..++.+++++|+  ++++||||+. +|+.|++.
T Consensus       176 ~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~  216 (253)
T d1yv9a1         176 VYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQ  216 (253)
T ss_dssp             EECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHH
T ss_pred             eeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHH
Confidence            34468899999999999998  8999999996 59999874

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=98.76  E-value=2.1e-08  Score=81.71  Aligned_cols=35  Identities=23%  Similarity=0.311  Sum_probs=30.8

Q ss_pred             CCChHHHHHHHHHHcCC--CeEEEEecCc-ccHHhhhc
Q 025042          224 SGGKAAAVQQIRKAHAY--KVLAMIGDGA-TDLEVSIF  258 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~--~~v~~vGDg~-ND~~al~~  258 (259)
                      ++|++..+..+++++|+  ++++||||+. ||+.+++.
T Consensus       184 ~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~  221 (261)
T d1vjra_         184 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKN  221 (261)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHH
Confidence            57788999999999998  8999999995 69999874

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.9e-09  Score=86.05  Aligned_cols=39  Identities=21%  Similarity=0.297  Sum_probs=29.8

Q ss_pred             CCcCCCChHHHHHHHHHHcCCCeEEEEec----CcccHHhhhcC
Q 025042          220 PTSRSGGKAAAVQQIRKAHAYKVLAMIGD----GATDLEVSIFI  259 (259)
Q Consensus       220 ~~~~~~~K~~~v~~l~~~~g~~~v~~vGD----g~ND~~al~~v  259 (259)
                      ......+|..+++++++. ..+++++|||    |.||++|++++
T Consensus       179 i~~~~vsKg~al~~l~~~-~~~ev~afGD~~~~g~NDi~Ml~~~  221 (243)
T d2amya1         179 VFPDGWDKRYCLRHVEND-GYKTIYFFGDKTMPGGNDHEIFTDP  221 (243)
T ss_dssp             EEETTCSGGGGGGGTTTS-CCSEEEEEECSCC---CCCHHHHCT
T ss_pred             eeccccCHHHHHHHHhCC-CcceEEEEcCCCCCCCCcHHHHHcc
Confidence            445567899999998753 3389999999    77999999863

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=5.8e-09  Score=82.92  Aligned_cols=40  Identities=10%  Similarity=0.223  Sum_probs=32.3

Q ss_pred             CCCcCCCChHHHHHHHHHHcCCCeEEEEecCc----ccHHhhhcC
Q 025042          219 EPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGA----TDLEVSIFI  259 (259)
Q Consensus       219 ~~~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~----ND~~al~~v  259 (259)
                      +.+....+|+.+++.|++. ..++|++|||+.    ||++|++.+
T Consensus       178 ei~~~~vsKg~al~~L~~~-~~~ev~afGD~~~~G~ND~eml~~a  221 (244)
T d2fuea1         178 DVFPEGWDKRYCLDSLDQD-SFDTIHFFGNETSPGGNDFEIFADP  221 (244)
T ss_dssp             EEEETTCSTTHHHHHHTTS-CCSEEEEEESCCSTTSTTHHHHHST
T ss_pred             eecchhccHHHHHHHHhcC-ChhhEEEEcCCCCCCCCcHHHHHcC
Confidence            3445567899999999874 558999999965    999999863

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=98.61  E-value=7.5e-08  Score=78.08  Aligned_cols=35  Identities=17%  Similarity=0.190  Sum_probs=30.5

Q ss_pred             CCChHHHHHHHHHHcCC--CeEEEEecCcc-cHHhhhc
Q 025042          224 SGGKAAAVQQIRKAHAY--KVLAMIGDGAT-DLEVSIF  258 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g~--~~v~~vGDg~N-D~~al~~  258 (259)
                      ++|.+..++..+++.|+  ++|+||||+.+ |+.+++.
T Consensus       179 gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~  216 (253)
T d1wvia_         179 GKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIK  216 (253)
T ss_dssp             STTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHH
T ss_pred             ccCCcccceehhhhccccccceEEEcCChHHHHHHHHH
Confidence            36678999999999998  89999999976 9998875

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.41  E-value=2.1e-06  Score=67.87  Aligned_cols=170  Identities=11%  Similarity=0.131  Sum_probs=104.0

Q ss_pred             EEEEeCCCcccccch-HHHHHHHhcCchhHHHHHHHH--------cCCCCcHHHHHHHHHhhc---CCCHHHHHHHHHhC
Q 025042           85 AVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARA--------MGGSVPFEEALAARLSLF---KPSLSQVQDFLEKR  152 (259)
Q Consensus        85 ~vvFD~DGTLt~~~~-~~~l~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~  152 (259)
                      ++++|+.|.|+-++. .+..+.....+. .-.....+        .......-..+.-....+   .-..+.+.+|....
T Consensus         1 ~fvtDcEGPlslnDnA~E~~a~~~~~gr-fF~~lS~yDD~L~~E~~reGY~aG~TLKLIvPFl~a~Gvt~edL~~fSE~~   79 (308)
T d1y8aa1           1 MFFTDWEGPWILTDFALELCMAVFNNAR-FFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAAGVKNRDVERIAELS   79 (308)
T ss_dssp             EEEECSBTTTBCCCHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred             CceeccCCCCcccccHHHHHHhcCCCcc-hhhhhhhhhhHHHHHhhccCCCCccchhhHHHHHHHhCCCHHHHHHHhhhc
Confidence            478999999977663 444444444443 21221111        111111112222222222   12345556666643


Q ss_pred             CCCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCCCCcEeecceeecCCCc-------e-------------
Q 025042          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGE-------F-------------  212 (259)
Q Consensus       153 ~~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~-------~-------------  212 (259)
                       .++.||+.++++.+++. .+.+++|.+.++.++++++.+|++. +.+.+.+..|+-..       +             
T Consensus        80 -~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~-e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~e  156 (308)
T d1y8aa1          80 -AKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRG-ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE  156 (308)
T ss_dssp             -CCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCS-EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred             -eeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCc-eeecccccccccCCChHHHHHHHHHhhhccCccHH
Confidence             57899999999999875 6789999999999999999999974 46666665542110       0             


Q ss_pred             --------------ecccCCCC-CcCCCChHHHHHHHHHHcCCCeEEEEecCcccHHhhhc
Q 025042          213 --------------LGFDANEP-TSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLEVSIF  258 (259)
Q Consensus       213 --------------~g~~~~~~-~~~~~~K~~~v~~l~~~~g~~~v~~vGDg~ND~~al~~  258 (259)
                                    .++..... ...+..|..+++......++...++||||++|.+|+++
T Consensus       157 el~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~  217 (308)
T d1y8aa1         157 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEA  217 (308)
T ss_dssp             HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHH
T ss_pred             HHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHH
Confidence                          00000001 11224578888888887787667999999999999985

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.35  E-value=6e-07  Score=70.23  Aligned_cols=84  Identities=15%  Similarity=0.264  Sum_probs=54.3

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCccc---c-HHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcCCCChHHH
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRH---M-INPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAA  230 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~---~-~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~K~~~  230 (259)
                      .+.||+.++++.++++|++++.+||....   . ++.+.+.+|++.....  .+.+      .+..     .....|...
T Consensus        86 ~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~--~vll------~~~~-----~~K~~rr~~  152 (209)
T d2b82a1          86 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN--PVIF------AGDK-----PGQNTKSQW  152 (209)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC--CCEE------CCCC-----TTCCCSHHH
T ss_pred             CcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc--ceEe------eCCC-----CCchHHHHH
Confidence            46789999999999999999999986432   2 3333456898632211  1111      1100     112345555


Q ss_pred             HHHHHHHcCCCeEEEEecCcccHHhhh
Q 025042          231 VQQIRKAHAYKVLAMIGDGATDLEVSI  257 (259)
Q Consensus       231 v~~l~~~~g~~~v~~vGDg~ND~~al~  257 (259)
                      |+    ++  +-++++||..+|+.+++
T Consensus       153 Ik----~y--~I~l~~GD~l~Df~aA~  173 (209)
T d2b82a1         153 LQ----DK--NIRIFYGDSDNDITAAR  173 (209)
T ss_dssp             HH----HT--TEEEEEESSHHHHHHHH
T ss_pred             HH----Hc--CeEEEecCCHHHHhHHH
Confidence            54    34  57999999999998875

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=9e-07  Score=68.79  Aligned_cols=79  Identities=14%  Similarity=0.298  Sum_probs=55.1

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCc------------cccHHHHHHHcCCCCCcEeecceeecCCCceecccCCCCCcC
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGF------------RHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSR  223 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~------------~~~~~~i~~~lgi~~~~~~~~~l~~~~~~~~~g~~~~~~~~~  223 (259)
                      ++|++.+.|+.|.+.|+.++++|+-.            ....+.+.++++.+. .++...              ....+ 
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~-~i~~~~--------------~~~~~-  114 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPF-QVLVAT--------------HAGLN-  114 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCC-EEEEEC--------------SSSSS-
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCc-cEEEec--------------Ccccc-
Confidence            57999999999999999999999841            112345667787752 222211              01113 


Q ss_pred             CCChHHHHHHHHHHcC----C--CeEEEEecCc
Q 025042          224 SGGKAAAVQQIRKAHA----Y--KVLAMIGDGA  250 (259)
Q Consensus       224 ~~~K~~~v~~l~~~~g----~--~~v~~vGDg~  250 (259)
                      .+|+.-.+..+.++++    +  ++++||||..
T Consensus       115 RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~  147 (195)
T d1yj5a1         115 RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA  147 (195)
T ss_dssp             STTSTHHHHHHHHTSSSSCCCCGGGCEEECSCC
T ss_pred             CCCccHHHHHHHHHhcccccCCcCceEEEeCcc
Confidence            3788888999988864    4  7899999954

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.67  E-value=5.7e-05  Score=53.86  Aligned_cols=45  Identities=9%  Similarity=0.063  Sum_probs=35.5

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCcc---------------ccHHHHHHHcCCCCCcE
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINPIASVLGIPPENI  199 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~---------------~~~~~i~~~lgi~~~~~  199 (259)
                      .|.+++.+.++.|++.|+++++.|+...               +....+++..|++.+..
T Consensus        24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~Yd~L   83 (124)
T d1xpja_          24 LPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVPYDEI   83 (124)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCCCSEE
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCCceEE
Confidence            5789999999999999999999998742               33566788889974433

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.27  E-value=0.00032  Score=49.74  Aligned_cols=42  Identities=17%  Similarity=0.038  Sum_probs=33.4

Q ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCcccc---HHHHHHHcCCCC
Q 025042          155 RLSPGIDELVKKLKANNKNVYLISGGFRHM---INPIASVLGIPP  196 (259)
Q Consensus       155 ~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~---~~~i~~~lgi~~  196 (259)
                      .+.|++.++|+.|++.|+++++.|+.....   ...++++-|++.
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~y   65 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF   65 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCCc
Confidence            467999999999999999999999875433   345677778764

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.15  E-value=0.052  Score=40.60  Aligned_cols=29  Identities=21%  Similarity=0.378  Sum_probs=23.6

Q ss_pred             CCCCccHHHHHHHHHHCCC-cEEEEeCCcc
Q 025042          154 PRLSPGIDELVKKLKANNK-NVYLISGGFR  182 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~-~v~ivTg~~~  182 (259)
                      ..+.||+.++++.|++.|. .++++|....
T Consensus        73 L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~  102 (195)
T d1q92a_          73 LEPLPGAVEAVKEMASLQNTDVFICTSPIK  102 (195)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCS
T ss_pred             CCcccCHHHHHHHHhhccCccceEEccccc
Confidence            5789999999999998765 5888887543

>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.22  E-value=0.0002  Score=62.64  Aligned_cols=61  Identities=7%  Similarity=0.034  Sum_probs=54.3

Q ss_pred             ceeeeeeeccCccchhhhccCcccccccccCCCCCCCHHHHHhccCcCEEEEeCC--Cccccc
Q 025042           37 RARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVD--STVCVD   97 (259)
Q Consensus        37 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~v~~~~~~e~~~~~k~vvFD~D--GTLt~~   97 (259)
                      +++++|+++|||+|++++.+-+..+.+.++++++||.=.+.|.+++....+.|++  +||+.+
T Consensus       184 ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n  246 (472)
T d1wpga4         184 AVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSN  246 (472)
T ss_dssp             HHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhh
Confidence            3677899999999999999988889999999999999999999999988999987  666553

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=88.76  E-value=0.21  Score=42.51  Aligned_cols=36  Identities=8%  Similarity=0.109  Sum_probs=32.3

Q ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHH
Q 025042          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASV  191 (259)
Q Consensus       156 ~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~  191 (259)
                      .-|....+|+.||++|.++.++|++.-..++..++.
T Consensus       186 k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y  221 (458)
T d2bdea1         186 REKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDY  221 (458)
T ss_dssp             CCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHH
T ss_pred             CChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhh
Confidence            358899999999999999999999999998888775

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.20  E-value=0.33  Score=35.81  Aligned_cols=41  Identities=17%  Similarity=0.306  Sum_probs=36.6

Q ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCccccHHHHHHHcCCC
Q 025042          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIP  195 (259)
Q Consensus       154 ~~~~p~~~e~l~~Lk~~g~~v~ivTg~~~~~~~~i~~~lgi~  195 (259)
                      ...|||+.+||+++.+. +.++|.|.+.+..++.+++.++-.
T Consensus        54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~   94 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW   94 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSS
T ss_pred             EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccC
Confidence            35799999999999876 889999999999999999998753