Citrus Sinensis ID: 025044

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGED
cccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHcccccccccccc
ccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccccc
MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDehlipsctggestVFYYKMKGDYYRYLAEfktgderkdVADLSMKAYQAASTtaeaelspthpirlgLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDtlseesykDSTLIMQLLRDNLtlwtsdipedggdeaqkmdisakdgeged
MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLsvgyknvigarraswrilssieqkeeargnelnvkrikEYRQKVEAELSKISTDIMQVIDEhlipsctggeSTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTtaeaelspthPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTsdipedggdeaqkmdisakdgeged
MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGED
*******FVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSI************VKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGD**************************THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS************************
***DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILS***************KRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLT****************************
MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAY***********SPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDI*********
*****ENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDKDRENFVYxxxxxxxxxxxxxxxxxxxxxANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGED
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query258 2.2.26 [Sep-21-2011]
Q96453261 14-3-3-like protein D OS= yes no 0.988 0.977 0.847 1e-125
P42654261 14-3-3-like protein B OS= N/A no 0.988 0.977 0.835 1e-124
Q96452258 14-3-3-like protein C OS= no no 0.980 0.980 0.835 1e-122
P93213261 14-3-3 protein 8 OS=Solan N/A no 0.988 0.977 0.824 1e-122
P93214261 14-3-3 protein 9 OS=Solan N/A no 0.988 0.977 0.832 1e-119
Q96299263 14-3-3-like protein GF14 yes no 0.992 0.973 0.781 1e-117
P93212252 14-3-3 protein 7 OS=Solan N/A no 0.949 0.972 0.787 1e-114
Q9C5W6268 14-3-3-like protein GF14 no no 0.976 0.940 0.773 1e-114
Q41246251 14-3-3-like protein OS=Ni N/A no 0.945 0.972 0.779 1e-112
Q9S9Z8252 14-3-3-like protein GF14 no no 0.945 0.968 0.775 1e-110
>sp|Q96453|1433D_SOYBN 14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1 Back     alignment and function desciption
 Score =  449 bits (1154), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/256 (84%), Positives = 236/256 (92%), Gaps = 1/256 (0%)

Query: 3   KDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWR 62
           KDRENFVYIAKLAEQAERY+EMV++MK VANLDVELTVEERNLLSVGYKNVIGARRASWR
Sbjct: 5   KDRENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEERNLLSVGYKNVIGARRASWR 64

Query: 63  ILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFY 122
           ILSSIEQKEE +GNELN KRIKEYRQKVE ELS I  D+M+VIDEHLIPS   GESTVFY
Sbjct: 65  ILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGESTVFY 124

Query: 123 YKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFY 182
           YKMKGDYYRYLAEFK+G+E+K+ AD SMKAY++A+  AEA+L PTHPIRLGLALNFSVFY
Sbjct: 125 YKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFY 184

Query: 183 YEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGD 242
           YEI+NSPERACHLAKQAFDEAISELDTL+EESYKDSTLIMQLLRDNLTLWTSDIPEDG D
Sbjct: 185 YEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGED 244

Query: 243 EAQKMDISAKDGEGED 258
            AQK++ +AK G GED
Sbjct: 245 -AQKVNGTAKLGGGED 259

Glycine max (taxid: 3847)
>sp|P42654|1433B_VICFA 14-3-3-like protein B OS=Vicia faba PE=2 SV=1 Back     alignment and function description
>sp|Q96452|1433C_SOYBN 14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1 Back     alignment and function description
>sp|P93213|14338_SOLLC 14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2 Back     alignment and function description
>sp|P93214|14339_SOLLC 14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2 Back     alignment and function description
>sp|Q96299|14339_ARATH 14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2 Back     alignment and function description
>sp|P93212|14337_SOLLC 14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2 Back     alignment and function description
>sp|Q9C5W6|14312_ARATH 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1 Back     alignment and function description
>sp|Q41246|1433_TOBAC 14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q9S9Z8|14311_ARATH 14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query258
255564764260 14-3-3 protein, putative [Ricinus commun 0.984 0.976 0.863 1e-127
224121522260 predicted protein [Populus trichocarpa] 0.984 0.976 0.882 1e-126
225461654254 PREDICTED: 14-3-3-like protein D-like [V 0.972 0.988 0.885 1e-126
6752903259 14-3-3-like protein [Euphorbia esula] 0.980 0.976 0.843 1e-124
8099061260 14-3-3 protein [Populus tremula x Populu 0.984 0.976 0.855 1e-124
302142902290 unnamed protein product [Vitis vinifera] 0.918 0.817 0.911 1e-124
15778154261 14-3-3 protein [Nicotiana tabacum] 0.988 0.977 0.835 1e-124
228552592261 14-3-3 [Cicer arietinum] 0.988 0.977 0.843 1e-124
224114812260 predicted protein [Populus trichocarpa] 0.984 0.976 0.847 1e-124
351724655261 14-3-3-like protein D [Glycine max] gi|3 0.988 0.977 0.847 1e-124
>gi|255564764|ref|XP_002523376.1| 14-3-3 protein, putative [Ricinus communis] gi|223537326|gb|EEF38955.1| 14-3-3 protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/256 (86%), Positives = 238/256 (92%), Gaps = 2/256 (0%)

Query: 3   KDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWR 62
           KDRE FVY+AKLAEQAERYDEMV++MKKVA LDVELTVEERNLLSVGYKNV+G+RRASWR
Sbjct: 5   KDRETFVYVAKLAEQAERYDEMVESMKKVAKLDVELTVEERNLLSVGYKNVVGSRRASWR 64

Query: 63  ILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFY 122
           ILSSIEQKEE++GNE NVKRIKEYRQKVE+ELS I +DIM VIDEHLIPSCT GESTVFY
Sbjct: 65  ILSSIEQKEESKGNEANVKRIKEYRQKVESELSTICSDIMTVIDEHLIPSCTAGESTVFY 124

Query: 123 YKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFY 182
           YKMKGDYYRYLAEFKTG+++K+ AD S+KAY+ ASTTAE+EL PTHPIRLGLALNFSVFY
Sbjct: 125 YKMKGDYYRYLAEFKTGNDKKEAADQSLKAYETASTTAESELPPTHPIRLGLALNFSVFY 184

Query: 183 YEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGD 242
           YEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDG D
Sbjct: 185 YEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGED 244

Query: 243 EAQKMDISAKDGEGED 258
             QKM+ S K G GED
Sbjct: 245 --QKMETSGKAGGGED 258

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224121522|ref|XP_002330721.1| predicted protein [Populus trichocarpa] gi|8515890|gb|AAF76227.1|AF272573_1 14-3-3 protein [Populus tremula x Populus alba] gi|222872497|gb|EEF09628.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225461654|ref|XP_002285427.1| PREDICTED: 14-3-3-like protein D-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|6752903|gb|AAF27931.1|AF222805_1 14-3-3-like protein [Euphorbia esula] Back     alignment and taxonomy information
>gi|8099061|gb|AAD27824.2| 14-3-3 protein [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|302142902|emb|CBI20197.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15778154|dbj|BAB68527.1| 14-3-3 protein [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|228552592|gb|ACQ45020.1| 14-3-3 [Cicer arietinum] Back     alignment and taxonomy information
>gi|224114812|ref|XP_002316863.1| predicted protein [Populus trichocarpa] gi|222859928|gb|EEE97475.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|351724655|ref|NP_001237065.1| 14-3-3-like protein D [Glycine max] gi|3023197|sp|Q96453.1|1433D_SOYBN RecName: Full=14-3-3-like protein D; AltName: Full=SGF14D gi|1575731|gb|AAB09583.1| SGF14D [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query258
TAIR|locus:2041544276 GRF9 "general regulatory facto 0.992 0.927 0.781 7.5e-105
TAIR|locus:2197940268 GRF12 "general regulatory fact 0.976 0.940 0.773 3.3e-102
TAIR|locus:2196506254 GRF10 "AT1G22300" [Arabidopsis 0.949 0.964 0.752 3.7e-96
ZFIN|ZDB-GENE-030131-779255 ywhae1 "tyrosine 3-monooxygena 0.980 0.992 0.720 4.3e-93
UNIPROTKB|Q5ZMT0255 YWHAE "14-3-3 protein epsilon" 0.988 1.0 0.719 9e-93
UNIPROTKB|P62261255 YWHAE "14-3-3 protein epsilon" 0.988 1.0 0.719 9e-93
UNIPROTKB|P62258255 YWHAE "14-3-3 protein epsilon" 0.988 1.0 0.719 9e-93
MGI|MGI:894689255 Ywhae "tyrosine 3-monooxygenas 0.988 1.0 0.719 9e-93
RGD|62000255 Ywhae "tyrosine 3-monooxygenas 0.988 1.0 0.719 9e-93
FB|FBgn0020238262 14-3-3epsilon "14-3-3epsilon" 0.965 0.950 0.713 3.5e-91
TAIR|locus:2041544 GRF9 "general regulatory factor 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
 Identities = 200/256 (78%), Positives = 229/256 (89%)

Query:     3 KDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWR 62
             K+R+ FVY+AKL+EQAERY+EMV++MK VA L+V+LTVEERNLLSVGYKNVIG+RRASWR
Sbjct:     5 KERDTFVYLAKLSEQAERYEEMVESMKSVAKLNVDLTVEERNLLSVGYKNVIGSRRASWR 64

Query:    63 ILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFY 122
             I SSIEQKE  +GN++NVKRIKEY +KVE ELS I  DIM V+DEHLIPS + GESTVF+
Sbjct:    65 IFSSIEQKEAVKGNDVNVKRIKEYMEKVELELSNICIDIMSVLDEHLIPSASEGESTVFF 124

Query:   123 YKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFY 182
              KMKGDYYRYLAEFK+G+ERK+ AD S+KAY+ A+T AEA+L PTHPIRLGLALNFSVFY
Sbjct:   125 NKMKGDYYRYLAEFKSGNERKEAADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFY 184

Query:   183 YEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGD 242
             YEIMN+PERACHLAKQAFDEAISELDTL+EESYKDSTLIMQLLRDNLTLWTSDI E+GGD
Sbjct:   185 YEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDISEEGGD 244

Query:   243 EAQKMDISAKDGEGED 258
             +A K + SAK G G D
Sbjct:   245 DAHKTNGSAKPGAGGD 260
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0019904 "protein domain specific binding" evidence=IEA
GO:0045309 "protein phosphorylated amino acid binding" evidence=TAS
GO:0005634 "nucleus" evidence=IDA
GO:0005509 "calcium ion binding" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0048528 "post-embryonic root development" evidence=IMP
GO:0006096 "glycolysis" evidence=RCA
GO:0006833 "water transport" evidence=RCA
GO:0006972 "hyperosmotic response" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0009266 "response to temperature stimulus" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0032880 "regulation of protein localization" evidence=RCA
GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA
GO:0046686 "response to cadmium ion" evidence=RCA
GO:0009570 "chloroplast stroma" evidence=IDA;IPI
TAIR|locus:2197940 GRF12 "general regulatory factor 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196506 GRF10 "AT1G22300" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-779 ywhae1 "tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZMT0 YWHAE "14-3-3 protein epsilon" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P62261 YWHAE "14-3-3 protein epsilon" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P62258 YWHAE "14-3-3 protein epsilon" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:894689 Ywhae "tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|62000 Ywhae "tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0020238 14-3-3epsilon "14-3-3epsilon" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P426541433B_VICFANo assigned EC number0.83590.98830.9770N/Ano
P42657RAD25_SCHPONo assigned EC number0.73610.91080.8703nono
P42656RAD24_SCHPONo assigned EC number0.75320.89530.8555yesno
P462661433_PEANo assigned EC number0.73020.92630.9192N/Ano
Q964531433D_SOYBNNo assigned EC number0.84760.98830.9770yesno
Q964521433C_SOYBNNo assigned EC number0.83590.98060.9806nono
Q990021433_TRIHANo assigned EC number0.74780.89140.8778N/Ano
P921771433E_DROMENo assigned EC number0.72220.95340.9389yesno
O653521433_HELANNo assigned EC number0.71420.93790.9343N/Ano
Q4141814331_SOLTUNo assigned EC number0.73060.94180.9382N/Ano
Q434701433B_HORVUNo assigned EC number0.72260.96890.9541N/Ano
P4910614331_MAIZENo assigned EC number0.75510.92630.9157N/Ano
Q0696714336_ORYSJNo assigned EC number0.71250.96890.9615nono
Q6EUP414335_ORYSJNo assigned EC number0.73430.96890.9541nono
Q9C5W614312_ARATHNo assigned EC number0.77380.97670.9402nono
P426531433A_VICFANo assigned EC number0.72190.92630.9157N/Ano
P29311BMH1_YEASTNo assigned EC number0.71720.94180.9101nono
P4265214334_SOLLCNo assigned EC number0.70150.98830.9807N/Ano
P34730BMH2_YEASTNo assigned EC number0.72610.93020.8791yesno
P529081433_CHLRENo assigned EC number0.71310.98830.9845N/Ano
P622621433E_SHEEPNo assigned EC number0.75940.91860.9294N/Ano
P622601433E_RATNo assigned EC number0.75940.91860.9294yesno
P622611433E_BOVINNo assigned EC number0.75940.91860.9294yesno
P9321314338_SOLLCNo assigned EC number0.82420.98830.9770N/Ano
P9321214337_SOLLCNo assigned EC number0.78710.94960.9722N/Ano
P9321114336_SOLLCNo assigned EC number0.69370.98830.9883N/Ano
P933431433C_TOBACNo assigned EC number0.73440.92630.9192N/Ano
Q9S9Z814311_ARATHNo assigned EC number0.77550.94570.9682nono
P9321414339_SOLLCNo assigned EC number0.83200.98830.9770N/Ano
P4264414333_ARATHNo assigned EC number0.71030.96120.9725nono
P4607714334_ARATHNo assigned EC number0.71780.92630.8951nono
P546321433_DICDINo assigned EC number0.74180.92630.9484yesno
Q7XTE814332_ORYSJNo assigned EC number0.75510.92630.9122nono
Q9629914339_ARATHNo assigned EC number0.78120.99220.9733yesno
P622581433E_HUMANNo assigned EC number0.75940.91860.9294yesno
P9378414335_SOLTUNo assigned EC number0.71950.94180.9418N/Ano
Q9SP071433_LILLONo assigned EC number0.74180.93790.9343N/Ano
O427661433_CANALNo assigned EC number0.73390.90310.8825N/Ano
P9320914333_SOLLCNo assigned EC number0.72610.92630.9192N/Ano
P4834714310_ARATHNo assigned EC number0.73790.96120.9763nono
Q0152514332_ARATHNo assigned EC number0.72240.94180.9382nono
Q0152614332_MAIZENo assigned EC number0.73700.95340.9425N/Ano
Q6ZKC014333_ORYSJNo assigned EC number0.76130.93410.9414yesno
O499951433B_TOBACNo assigned EC number0.73140.92630.9372N/Ano
P9320814332_SOLLCNo assigned EC number0.73440.92630.9409N/Ano
P932591433_MESCRNo assigned EC number0.70700.98440.9621N/Ano
P622591433E_MOUSENo assigned EC number0.75940.91860.9294yesno
Q5ZMT01433E_CHICKNo assigned EC number0.75940.91860.9294yesno
Q412461433_TOBACNo assigned EC number0.77910.94570.9721N/Ano
P293051433A_HORVUNo assigned EC number0.71250.97280.9580N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query258
pfam00244236 pfam00244, 14-3-3, 14-3-3 protein 1e-155
smart00101244 smart00101, 14_3_3, 14-3-3 homologues 1e-134
cd08774225 cd08774, 14-3-3, 14-3-3 domain 1e-132
cd11309231 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domai 1e-131
COG5040268 COG5040, BMH1, 14-3-3 family protein [Signal trans 1e-131
cd10026237 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain 1e-126
cd10020230 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isofor 1e-126
cd11310230 cd11310, 14-3-3_1, 14-3-3 protein domain 1e-103
cd10022229 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta is 1e-102
cd10023234 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in 5e-99
cd10024246 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 2e-94
cd10025239 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14- 4e-92
cd10019242 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 7e-89
>gnl|CDD|215815 pfam00244, 14-3-3, 14-3-3 protein Back     alignment and domain information 
 Score =  431 bits (1112), Expect = e-155
 Identities = 179/236 (75%), Positives = 203/236 (86%)

Query: 5   RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRIL 64
           RE  VY+AKLAEQAERYD+MV+AMKKV  L  EL+VEERNLLSV YKNVIGARRASWRI+
Sbjct: 1   REELVYLAKLAEQAERYDDMVEAMKKVVELKEELSVEERNLLSVAYKNVIGARRASWRII 60

Query: 65  SSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYK 124
           SSIEQKEE++GNE  VK IKEYR+KVE EL  I  DI++++D+HLIP  +  ES VFY K
Sbjct: 61  SSIEQKEESKGNEKKVKLIKEYRKKVEEELINICNDILELLDKHLIPKASSPESKVFYLK 120

Query: 125 MKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYE 184
           MKGDYYRYLAEF +GDERK+ AD +++AY+AA   AE EL PTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEFASGDERKEAADKALEAYKAALEIAEKELPPTHPIRLGLALNFSVFYYE 180

Query: 185 IMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDG 240
           I+NSPE+AC LAKQAFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD  E+ 
Sbjct: 181 ILNSPEKACELAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDEEEEE 236

Length = 236
>gnl|CDD|128412 smart00101, 14_3_3, 14-3-3 homologues Back     alignment and domain information
>gnl|CDD|206755 cd08774, 14-3-3, 14-3-3 domain Back     alignment and domain information
>gnl|CDD|206763 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|227373 COG5040, BMH1, 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|206762 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206757 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206764 cd11310, 14-3-3_1, 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206758 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta isoforms of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206759 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in mice, tau in human), an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206760 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206761 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206756 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 14-3-3 protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 258
COG5040268 BMH1 14-3-3 family protein [Signal transduction me 100.0
smart00101244 14_3_3 14-3-3 homologues. 14-3-3 homologues mediat 100.0
PF00244236 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14 100.0
KOG0841247 consensus Multifunctional chaperone (14-3-3 family 100.0
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 96.19
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 93.85
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 92.93
PF1286294 Apc5: Anaphase-promoting complex subunit 5 90.66
PF12569 517 NARP1: NMDA receptor-regulated protein 1 ; InterPr 83.52
PF0771934 TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 82.35
>COG5040 BMH1 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=9e-96  Score=623.06  Aligned_cols=237  Identities=75%  Similarity=1.129  Sum_probs=233.6

Q ss_pred             CCchHHhHHHHHHHHHHhCChHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhcchhHH
Q 025044            1 MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNV   80 (258)
Q Consensus         1 m~~~re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Ls~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~   80 (258)
                      |+..|++.+|+|+|++||+||++|++-||.++..+.+|+.+|||||||||||+||.||+|||++++++||++++++..++
T Consensus         1 Ms~~rE~svylAkLaeqAERYe~MvenMk~vas~~~eLsVeeRNLlSVAYKNvigaRRaSWRivsSieQKeEsk~~~~qv   80 (268)
T COG5040           1 MSTSREDSVYLAKLAEQAERYEEMVENMKLVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTHQV   80 (268)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhcCCChhHH
Confidence            78889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccceeheeeccccccchhccccchhhHHHHHHHHHHHHHHHHHH
Q 025044           81 KRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTA  160 (258)
Q Consensus        81 ~~i~~yk~kie~EL~~~C~eii~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a  160 (258)
                      .+|+.||++|++||..||++|+.+|+++|||.+++.|++|||+|||||||||+|||..|+.+.++.+.+.++|+.|.++|
T Consensus        81 ~lI~eyrkkiE~EL~~icddiL~vl~~hlipaa~~~EskvFyyKMKGDYyRYlAEf~~G~~~~e~a~~slE~YK~AseiA  160 (268)
T COG5040          81 ELIKEYRKKIETELTKICDDILSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFSVGEAREEAADSSLEAYKAASEIA  160 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeecchHHHHHHHhccchHhHHHHHhHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhhcCCC
Q 025044          161 EAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIP  237 (258)
Q Consensus       161 ~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLrdNl~lW~~e~~  237 (258)
                      ...||||||||||||||||||||||+|++++||.|||+|||+||++||+|+|++|+|||+||||||||||+||++.+
T Consensus       161 ~teLpPT~PirLGLALNfSVFyYEIlnspdkAC~lAKqaFDeAI~ELDtLSEEsYkDSTLIMQLLRDNLTLWTSd~e  237 (268)
T COG5040         161 TTELPPTHPIRLGLALNFSVFYYEILNSPDKACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDAE  237 (268)
T ss_pred             hccCCCCCchhhhheecceeeeeecccCcHHHHHHHHHHHHHHHHHHhhhhhhhhcchHHHHHHHHhcceeeecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999754

>smart00101 14_3_3 14-3-3 homologues Back     alignment and domain information
>PF00244 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14-3-3 proteins are a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimeric within all eukaryotic cells [, ] Back     alignment and domain information
>KOG0841 consensus Multifunctional chaperone (14-3-3 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PF12862 Apc5: Anaphase-promoting complex subunit 5 Back     alignment and domain information
>PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala Back     alignment and domain information
>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query258
3ubw_A261 Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphope 1e-102
2br9_A234 14-3-3 Protein Epsilon (Human) Complexed To Peptide 1e-101
3ual_A232 Crystal Structure Of 14-3-3 Epsilon With Mlf1 Pepti 1e-101
1o9c_A260 Structural View Of A Fungal Toxin Acting On A 14-3- 1e-100
3axy_C240 Structure Of Florigen Activation Complex Consisting 1e-99
2o98_A242 Structure Of The 14-3-3 H+-Atpase Plant Complex Len 8e-98
3m50_A240 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E 1e-97
4dx0_A243 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A 1e-96
2c1j_A258 Molecular Basis For The Recognition Of Phosphorylat 1e-86
3uzd_A248 Crystal Structure Of 14-3-3 Gamma Length = 248 2e-86
2b05_A246 Crystal Structure Of 14-3-3 Gamma In Complex With A 3e-86
1a38_A245 14-3-3 Protein Zeta Bound To R18 Peptide Length = 2 4e-86
2v7d_A247 14-3-3 Protein Zeta In Complex With Thr758 Phosphor 4e-86
3rdh_A248 X-Ray Induced Covalent Inhibition Of 14-3-3 Length 5e-86
2bq0_A245 14-3-3 Protein Beta (Human) Length = 245 3e-85
4fj3_A235 14-3-3 Isoform Zeta In Complex With A Diphoyphoryla 2e-84
2o02_A230 Phosphorylation Independent Interactions Between 14 2e-84
4gnt_A245 Complex Of Chrebp And 14-3-3beta Length = 245 8e-84
2c63_A247 14-3-3 Protein Eta (Human) Complexed To Peptide Len 1e-82
4e2e_A248 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 1e-82
2btp_A256 14-3-3 Protein Theta (Human) Complexed To Peptide L 2e-81
2npm_A260 Crystal Structure Of Cryptosporidium Parvum 14-3-3 1e-80
4dnk_A247 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 2e-80
3lw1_A253 Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptid 5e-77
1ywt_A248 Crystal Structure Of The Human Sigma Isoform Of 14- 6e-77
3smo_A235 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 1e-76
3p1r_A236 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 1e-76
3p1p_A236 Crystal Structure Of Human 14-3-3 Sigma C38nN166H I 1e-75
3o8i_A239 Structure Of 14-3-3 Isoform Sigma In Complex With A 4e-75
4hqw_A236 Molecular Tweezers Modulate 14-3-3 Protein-protein 4e-75
3iqj_A236 Crystal Structure Of Human 14-3-3 Sigma In Complex 5e-75
4dat_A234 Structure Of 14-3-3 Sigma In Complex With Padi6 14- 5e-75
3t0l_A235 Small-Molecule Inhibitors Of 14-3-3 Protein-Protein 5e-75
3p1n_A235 Crystal Structure Of Human 14-3-3 Sigma In Complex 6e-75
3u9x_A235 Covalent Attachment Of Pyridoxal-Phosphate Derivati 2e-74
3efz_A268 Crystal Structure Of A 14-3-3 Protein From Cryptosp 6e-14
>pdb|3UBW|A Chain A, Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphopeptide And A Small Fragment Hit From A Fbdd Screen Length = 261 Back     alignment and structure 
Iteration: 1

 Score =  366 bits (939), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/232 (76%), Positives = 201/232 (86%)
Query: 4   DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRI 63
           DRE+ VY AKLAEQAERYDEMV++MKKVA +DVELTVEERNLLSV YKNVIGARRASWRI
Sbjct: 30  DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRI 89
Query: 64  LSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYY 123
           +SSIEQKEE +G E  +K I+EYRQ VE EL  I  DI+ V+D+HLIP+   GES VFYY
Sbjct: 90  ISSIEQKEENKGGEDKLKMIREYRQMVETELKLICXDILDVLDKHLIPAANTGESKVFYY 149
Query: 124 KMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYY 183
           KMKGDY+RYLAEF TG++RK+ A+ S+ AY+AAS  A  EL PTHPIRLGLALNFSVFYY
Sbjct: 150 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 209
Query: 184 EIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 235
           EI+NSP+RAC LAK AFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD
Sbjct: 210 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261
>pdb|2BR9|A Chain A, 14-3-3 Protein Epsilon (Human) Complexed To Peptide Length = 234 Back     alignment and structure
>pdb|3UAL|A Chain A, Crystal Structure Of 14-3-3 Epsilon With Mlf1 Peptide Length = 232 Back     alignment and structure
>pdb|1O9C|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3 Regulatory Complex Length = 260 Back     alignment and structure
>pdb|3AXY|C Chain C, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 240 Back     alignment and structure
>pdb|2O98|A Chain A, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 242 Back     alignment and structure
>pdb|3M50|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 240 Back     alignment and structure
>pdb|4DX0|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A PYRAZOLE Derivative Length = 243 Back     alignment and structure
>pdb|2C1J|A Chain A, Molecular Basis For The Recognition Of Phosphorylated And Phosphoacetylated Histone H3 By 14-3-3 Length = 258 Back     alignment and structure
>pdb|3UZD|A Chain A, Crystal Structure Of 14-3-3 Gamma Length = 248 Back     alignment and structure
>pdb|2B05|A Chain A, Crystal Structure Of 14-3-3 Gamma In Complex With A Phosphoserine Peptide Length = 246 Back     alignment and structure
>pdb|1A38|A Chain A, 14-3-3 Protein Zeta Bound To R18 Peptide Length = 245 Back     alignment and structure
>pdb|2V7D|A Chain A, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated Integrin Beta2 Peptide Length = 247 Back     alignment and structure
>pdb|3RDH|A Chain A, X-Ray Induced Covalent Inhibition Of 14-3-3 Length = 248 Back     alignment and structure
>pdb|2BQ0|A Chain A, 14-3-3 Protein Beta (Human) Length = 245 Back     alignment and structure
>pdb|4FJ3|A Chain A, 14-3-3 Isoform Zeta In Complex With A Diphoyphorylated C-Raf Peptide Length = 235 Back     alignment and structure
>pdb|2O02|A Chain A, Phosphorylation Independent Interactions Between 14-3-3 And Exoenzyme S: From Structure To Pathogenesis Length = 230 Back     alignment and structure
>pdb|4GNT|A Chain A, Complex Of Chrebp And 14-3-3beta Length = 245 Back     alignment and structure
>pdb|2C63|A Chain A, 14-3-3 Protein Eta (Human) Complexed To Peptide Length = 247 Back     alignment and structure
>pdb|4E2E|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Gamma Polypeptide (Ywhag) From Homo Sapiens At 2.25 A Resolution Length = 248 Back     alignment and structure
>pdb|2BTP|A Chain A, 14-3-3 Protein Theta (Human) Complexed To Peptide Length = 256 Back     alignment and structure
>pdb|2NPM|A Chain A, Crystal Structure Of Cryptosporidium Parvum 14-3-3 Protein In Complex With Peptide Length = 260 Back     alignment and structure
>pdb|4DNK|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Beta Polypeptide (Ywhab) From Homo Sapiens At 2.20 A Resolution. Length = 247 Back     alignment and structure
>pdb|3LW1|A Chain A, Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptide Length = 253 Back     alignment and structure
>pdb|1YWT|A Chain A, Crystal Structure Of The Human Sigma Isoform Of 14-3-3 In Complex With A Mode-1 Phosphopeptide Length = 248 Back     alignment and structure
>pdb|3SMO|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin J Aglycone Length = 235 Back     alignment and structure
>pdb|3P1R|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|3P1P|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|3O8I|A Chain A, Structure Of 14-3-3 Isoform Sigma In Complex With A C-Raf1 Peptide And A Stabilizing Small Molecule Fragment Length = 239 Back     alignment and structure
>pdb|4HQW|A Chain A, Molecular Tweezers Modulate 14-3-3 Protein-protein Interactions Length = 236 Back     alignment and structure
>pdb|3IQJ|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Raf1 Peptide (10mer) Length = 236 Back     alignment and structure
>pdb|4DAT|A Chain A, Structure Of 14-3-3 Sigma In Complex With Padi6 14-3-3 Binding Motif Ii Length = 234 Back     alignment and structure
>pdb|3T0L|A Chain A, Small-Molecule Inhibitors Of 14-3-3 Protein-Protein Interactions From Virtual Screening Length = 235 Back     alignment and structure
>pdb|3P1N|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Task-3 Peptide Length = 235 Back     alignment and structure
>pdb|3U9X|A Chain A, Covalent Attachment Of Pyridoxal-Phosphate Derivatives To 14-3-3 Proteins Length = 235 Back     alignment and structure
>pdb|3EFZ|A Chain A, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium Parvum (Cgd1_2980) Length = 268 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query258
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 1e-105
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 1e-105
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 1e-104
2npm_A260 14-3-3 domain containing protein; cell regulator p 1e-103
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 1e-103
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 1e-101
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 8e-97
2o8p_A227 14-3-3 domain containing protein; signaling protei 9e-86
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Length = 248 Back     alignment and structure
 Score =  304 bits (779), Expect = e-105
 Identities = 152/244 (62%), Positives = 187/244 (76%), Gaps = 2/244 (0%)

Query: 4   DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRI 63
           DRE  V  A+LAEQAERYD+M  AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR+
Sbjct: 3   DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRV 62

Query: 64  LSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSC--TGGESTVF 121
           +SSIEQK  A GNE  ++ ++ YR+K+E EL  +  D++ ++D +LI +C  T  ES VF
Sbjct: 63  ISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVF 122

Query: 122 YYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVF 181
           Y KMKGDYYRYLAE  TG++R  V + S KAY  A   ++  + PTHPIRLGLALN+SVF
Sbjct: 123 YLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVF 182

Query: 182 YYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGG 241
           YYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G
Sbjct: 183 YYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 242

Query: 242 DEAQ 245
            E  
Sbjct: 243 GEGN 246
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Length = 234 Back     alignment and structure
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Length = 261 Back     alignment and structure
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Length = 260 Back     alignment and structure
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3p1s_A* 3p1r_A* 3p1q_A* 3p1p_A* 1ywt_A* 1yz5_A 2v7d_A* 2o02_A 1qja_A* 1a37_A 1a38_A 1a4o_A* 1ib1_A* ... Length = 236 Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Length = 260 Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Length = 268 Back     alignment and structure
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Length = 227 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query258
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 100.0
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 100.0
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 100.0
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 100.0
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 100.0
2npm_A260 14-3-3 domain containing protein; cell regulator p 100.0
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 100.0
2o8p_A227 14-3-3 domain containing protein; signaling protei 100.0
3vtx_A184 MAMA; tetratricopeptide repeats (TPR) containing p 95.4
3edt_B283 KLC 2, kinesin light chain 2; superhelical, struct 94.76
3nf1_A311 KLC 1, kinesin light chain 1; TPR, structural geno 94.73
4g1t_A472 Interferon-induced protein with tetratricopeptide 93.22
3u4t_A272 TPR repeat-containing protein; structural genomics 92.86
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 92.6
2qfc_A293 PLCR protein; TPR, HTH, transcription regulation; 92.49
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 92.17
3hym_B330 Cell division cycle protein 16 homolog; APC, anaph 92.13
3fp2_A537 TPR repeat-containing protein YHR117W; TOM71, mito 91.87
4abn_A 474 Tetratricopeptide repeat protein 5; P53 cofactor, 91.33
4a1s_A 411 PINS, partner of inscuteable; cell cycle, LGN, mit 91.01
3qww_A433 SET and MYND domain-containing protein 2; methyltr 91.0
4i17_A228 Hypothetical protein; TPR repeats protein, structu 90.99
1fch_A368 Peroxisomal targeting signal 1 receptor; protein-p 90.87
3qww_A433 SET and MYND domain-containing protein 2; methyltr 90.87
3ro2_A338 PINS homolog, G-protein-signaling modulator 2; TPR 90.65
3edt_B283 KLC 2, kinesin light chain 2; superhelical, struct 89.98
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 89.98
2q7f_A243 YRRB protein; TPR, protein binding; 2.49A {Bacillu 89.69
3u3w_A293 Transcriptional activator PLCR protein; ternary co 89.49
3qky_A261 Outer membrane assembly lipoprotein YFIO; membrane 89.37
3ulq_A383 Response regulator aspartate phosphatase F; tetrat 89.23
4eqf_A365 PEX5-related protein; accessory protein, tetratric 89.03
3ro2_A338 PINS homolog, G-protein-signaling modulator 2; TPR 88.65
2xpi_A597 Anaphase-promoting complex subunit CUT9; cell cycl 87.52
2gw1_A 514 Mitochondrial precursor proteins import receptor; 87.51
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 87.18
4gcn_A127 Protein STI-1; structural genomics, PSI-biology, m 86.98
3hym_B330 Cell division cycle protein 16 homolog; APC, anaph 86.9
3fp2_A 537 TPR repeat-containing protein YHR117W; TOM71, mito 85.85
3sf4_A406 G-protein-signaling modulator 2; tetratricopeptide 85.51
3ulq_A 383 Response regulator aspartate phosphatase F; tetrat 85.44
4a1s_A411 PINS, partner of inscuteable; cell cycle, LGN, mit 85.42
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 85.39
3sf4_A 406 G-protein-signaling modulator 2; tetratricopeptide 85.03
4b4t_Q 434 26S proteasome regulatory subunit RPN6; hydrolase, 84.83
3uq3_A258 Heat shock protein STI1; HSP90, peptide binding, c 84.25
3ieg_A359 DNAJ homolog subfamily C member 3; TPR motif, chap 84.05
4gyw_A 723 UDP-N-acetylglucosamine--peptide N- acetylglucosam 83.94
2ho1_A252 Type 4 fimbrial biogenesis protein PILF; type IV p 83.57
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 83.56
2xpi_A597 Anaphase-promoting complex subunit CUT9; cell cycl 82.6
3rkv_A162 Putative peptidylprolyl isomerase; structural geno 82.22
3ieg_A359 DNAJ homolog subfamily C member 3; TPR motif, chap 82.05
3q15_A378 PSP28, response regulator aspartate phosphatase H; 81.97
2pl2_A217 Hypothetical conserved protein TTC0263; TPR, prote 81.09
3nf1_A311 KLC 1, kinesin light chain 1; TPR, structural geno 80.98
1fch_A368 Peroxisomal targeting signal 1 receptor; protein-p 80.71
1elr_A131 TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp 80.54
3ro3_A164 PINS homolog, G-protein-signaling modulator 2; asy 80.33
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Back     alignment and structure
Probab=100.00  E-value=1.8e-98  Score=667.58  Aligned_cols=239  Identities=63%  Similarity=1.000  Sum_probs=224.4

Q ss_pred             CCchHHhHHHHHHHHHHhCChHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhcchhHH
Q 025044            1 MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNV   80 (258)
Q Consensus         1 m~~~re~l~~~AklaeqaeRy~Dm~~~mk~~i~~~~~Ls~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~   80 (258)
                      |+ +|++++|+||||+|||||+||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.++
T Consensus         1 m~-~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~   79 (248)
T 3uzd_A            1 MV-DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKI   79 (248)
T ss_dssp             -C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-H
T ss_pred             CC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHH
Confidence            54 79999999999999999999999999999999999999999999999999999999999999999999877888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC--ccceeheeeccccccchhccccchhhHHHHHHHHHHHHHHHH
Q 025044           81 KRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGG--ESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAAST  158 (258)
Q Consensus        81 ~~i~~yk~kie~EL~~~C~eii~lid~~Lip~~~~~--eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~  158 (258)
                      +.+++||++|++||..+|++||++||++|||+++++  |+||||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus        80 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~  159 (248)
T 3uzd_A           80 EMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHE  159 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999  999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhhcCCCC
Q 025044          159 TAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE  238 (258)
Q Consensus       159 ~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLrdNl~lW~~e~~~  238 (258)
                      +|+.+||||||||||||||||||||||+|+|++||.||++|||+||++||+|+|++|+|||+||||||||||+||++.++
T Consensus       160 iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~  239 (248)
T 3uzd_A          160 ISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQD  239 (248)
T ss_dssp             HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-----
T ss_pred             HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcc
Confidence            99989999999999999999999999999999999999999999999999999999999999999999999999998776


Q ss_pred             CC
Q 025044          239 DG  240 (258)
Q Consensus       239 ~~  240 (258)
                      ++
T Consensus       240 ~~  241 (248)
T 3uzd_A          240 DD  241 (248)
T ss_dssp             --
T ss_pred             cc
Confidence            65
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ... Back     alignment and structure
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Back     alignment and structure
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Back     alignment and structure
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Back     alignment and structure
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Back     alignment and structure
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Back     alignment and structure
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Back     alignment and structure
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} Back     alignment and structure
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} Back     alignment and structure
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 Back     alignment and structure
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A Back     alignment and structure
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Back     alignment and structure
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Back     alignment and structure
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Back     alignment and structure
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Back     alignment and structure
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Back     alignment and structure
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Back     alignment and structure
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Back     alignment and structure
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* Back     alignment and structure
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Back     alignment and structure
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Back     alignment and structure
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Back     alignment and structure
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Back     alignment and structure
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Back     alignment and structure
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Back     alignment and structure
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Back     alignment and structure
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Back     alignment and structure
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 258
d1o9da_236 a.118.7.1 (A:) 14-3-3-like protein C {Common tobac 1e-126
d2o02a1230 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) 1e-124
d3efza1223 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cry 1e-103
d2o8pa1220 a.118.7.1 (A:8-227) 14-3-3 domain containing prote 4e-94
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 236 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score =  354 bits (911), Expect = e-126
 Identities = 173/234 (73%), Positives = 199/234 (85%), Gaps = 2/234 (0%)

Query: 4   DRENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASW 61
            RE  VY+AKLAEQAERY+EMV+ M+KV+N     ELTVEERNLLSV YKNVIGARRASW
Sbjct: 3   AREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASW 62

Query: 62  RILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVF 121
           RI+SSIEQKEE+RGNE +V  I+EYR K+E ELSKI   I++++D  LIPS   G+S VF
Sbjct: 63  RIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVF 122

Query: 122 YYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVF 181
           Y KMKGDY+RYLAEFKTG ERK+ A+ ++ AY+AA   A  EL+PTHPIRLGLALNFSVF
Sbjct: 123 YLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVF 182

Query: 182 YYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 235
           YYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD
Sbjct: 183 YYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 236
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Length = 230 Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Length = 223 Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Length = 220 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query258
d1o9da_236 14-3-3-like protein C {Common tobacco (Nicotiana t 100.0
d2o02a1230 zeta isoform {Cow (Bos taurus) [TaxId: 9913]} 100.0
d3efza1223 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [ 100.0
d2o8pa1220 14-3-3 domain containing protein cgd7_2470 {Crypto 100.0
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 91.83
d1tjca_95 Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human 84.92
d1kt1a1168 FKBP51, C-terminal domain {Monkey (Saimiri bolivie 84.35
d1elra_128 Hop {Human (Homo sapiens) [TaxId: 9606]} 82.06
d1w3ba_388 O-GlcNAc transferase p110 subunit, OGT {Human (Hom 80.36
d1p5qa1170 FKBP52 (FKBP4), C-terminal domain {Human (Homo sap 80.13
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 80.03
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=8.9e-90  Score=608.64  Aligned_cols=233  Identities=74%  Similarity=1.110  Sum_probs=222.9

Q ss_pred             chHHhHHHHHHHHHHhCChHHHHHHHHHHhhc--CCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHhHhhhhhhhcchhHH
Q 025044            3 KDRENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNV   80 (258)
Q Consensus         3 ~~re~l~~~AklaeqaeRy~Dm~~~mk~~i~~--~~~Ls~eERnLlsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~   80 (258)
                      ++|++++|+|||++|||||+||+.+||++++.  +++||.||||||||||||+||++|+|||+|++++++++..+++.++
T Consensus         2 ~~Re~lv~~AklaeqaeRy~dm~~~mk~v~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e~k~~~~~~~~~~   81 (236)
T d1o9da_           2 TAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHV   81 (236)
T ss_dssp             CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred             CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHccCChHHH
Confidence            57999999999999999999999999999987  7899999999999999999999999999999999999888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccceeheeeccccccchhccccchhhHHHHHHHHHHHHHHHHHH
Q 025044           81 KRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTA  160 (258)
Q Consensus        81 ~~i~~yk~kie~EL~~~C~eii~lid~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a  160 (258)
                      +.+++||++|++||..+|++|+++||++|||.+++++++|||+|||||||||+|||..|+++++++++|.++|++|+++|
T Consensus        82 ~~i~~yk~kie~EL~~~C~~ii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~e~~~~~~~a~~aY~~A~~~a  161 (236)
T d1o9da_          82 NSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIA  161 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHhhchHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCcchHHHhhhHHHHHHHhhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhhcC
Q 025044          161 EAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD  235 (258)
Q Consensus       161 ~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqLLrdNl~lW~~e  235 (258)
                      +.+||||||+||||+||||||||||+|++++||++|++|||+|++++|++++++|+|+|+|||||||||++|++|
T Consensus       162 ~~~l~pt~PirLgLaLN~SVF~yEi~~~~~~A~~lak~afd~ai~~~d~l~ee~~~ds~~i~qLLrdNl~lW~~e  236 (236)
T d1o9da_         162 TTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD  236 (236)
T ss_dssp             HHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC-
T ss_pred             HhcCCCCcHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHhcCC
Confidence            989999999999999999999999999999999999999999999999999999999999999999999999985
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure