Citrus Sinensis ID: 025053

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MVIMIRWPFFKARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPHFAAHDTSFIP
Secondary Structure (PSIPRED)
cEEEEEccHHHHHccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccEEEcccccccEEEccEEEEEEEEEEEEEcccccccccccccEEEEcccccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHcHHEEEccccccccccccccccccccEEEEEcccccccccccccccccEcccccccccEEccccccEEEccccEEEEEEEEEEEEccccccccccccEEEEEEEcccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mvimirwpffkarihdlpglpagvkfdptDQELLEHLEAKVRADARklhplidefiptlegengicythpeklpgvskdglirhffhrpskayttgtrkrrkvhtdeqggetrwhktgktrpvfiggkvkgYKKILVLYTNygkqkkpektnWVMHQYhlggneeekdgeLVVSKVFyqtqprqcgnsvikdssslppkfninkgqsgldglknnpgvvdyynppfiafdqgggqnrasppqalipphfaahdtsfip
Flexible Loop (DISEMBL)
MVIMIRWPFFKARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFhrpskayttgtrkrrkvhtdeqggetrwhktgktrpvfiggkvkgyKKILVLYTNygkqkkpektnWVMHQYHLGGNEEEKDGELVVSKVFYQtqprqcgnsvikdssslppKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPhfaahdtsfip
Low Complexity Region (SEG)
MVIMIRWPFFKARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPHFAAHDTSFIP
Disordered region (IsUnstruct)
*VIMIRWPFFKARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRP************************WHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGN*****GELVVSKVFYQTQ*********************************NPGVVDYYNPPFIAFD****************************
Disordered Region (DISOPRED)
MVIMI*************GLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVF*******************************************************************************I*
Disordered Region (DISEMBL)
MVIMIRWPFFKARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKA***********************KTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPHFAAHDTSFIP
Disordered Region (DISPRO)
MVIMIRWPFFKARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQ*************************************VDYYNPPFIAF*****************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVIMIRWPFFKARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPHFAAHDTSFIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	258	2.2.26 [Sep-21-2011]
Q6NQK2	449	NAC domain-containing pro	no	no	0.635	0.365	0.590	5e-53
Q9FLJ2	336	NAC domain-containing pro	no	no	0.558	0.428	0.343	2e-12
O04017	375	Protein CUP-SHAPED COTYLE	no	no	0.581	0.4	0.344	6e-12
Q39013	289	NAC domain-containing pro	no	no	0.507	0.453	0.335	1e-11
O81913	359	NAC domain-containing pro	no	no	0.468	0.337	0.335	5e-10
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.476	0.434	0.344	8e-10
Q84K00	567	NAC domain-containing pro	no	no	0.569	0.259	0.308	1e-09
Q9S851	334	Protein CUP-SHAPED COTYLE	no	no	0.562	0.434	0.316	2e-09
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.593	0.501	0.286	3e-09
Q7F2L3	303	NAC domain-containing pro	no	no	0.484	0.412	0.335	4e-09

>sp|Q6NQK2|NAC8_ARATH NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1

 Score =  207 bits (527), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 101/171 (59%), Positives = 125/171 (73%), Gaps = 7/171 (4%)

Query: 14  IHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKL 73
           + D PGLP GVKFDP+D E++ HL AK        HP IDEFIPT+  ++GICYTHP+ L
Sbjct: 52  VDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQDDGICYTHPKNL 111

Query: 74  PGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYK 133
           PGV  DG + HFFH+  KAY+TGTRKRRK+H D+  G+ RWHKTG+T+PV + G  +G K
Sbjct: 112 PGVKSDGTVSHFFHKAIKAYSTGTRKRRKIH-DDDFGDVRWHKTGRTKPVVLDGVQRGCK 170

Query: 134 KILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQ 184
           KI+VLY       K  KTNWVMHQYHLG  E+EK+G+ VVSK+FYQ QP+Q
Sbjct: 171 KIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVSKIFYQ-QPQQ 215

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 80/169 (47%), Gaps = 25/169 (14%)

Query: 20  LPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 78
           LP G +F PTD+EL+ H L  KV         L   F     GE  +  + P +LP ++K
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKV---------LDTSFSAKAIGEVDLNKSEPWELPWMAK 66

Query: 79  DGLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILV 137
            G    +FF    + Y TG R  R     E G    W  TGK + ++ G  + G KK LV
Sbjct: 67  MGEKEWYFFCVRDRKYPTGLRTNRAT---EAG---YWKATGKDKEIYRGKSLVGMKKTLV 120

Query: 138 LYTNYGKQKKPEKTNWVMHQYHLGGNEEEKD------GELVVSKVFYQT 180
            Y   G+  K +KTNWVMH+Y L G     +       E V+ +VF ++
Sbjct: 121 FYR--GRAPKGQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKS 167

Arabidopsis thaliana (taxid: 3702)

>sp|O04017|NAC98_ARATH Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1

 Score = 71.6 bits (174), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 78/177 (44%), Gaps = 27/177 (15%)

Query: 20  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 79
           LP G +F PTD+EL+ H   +   D          F      E  +    P +LPG +K 
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVLDGC--------FSSRAIAEVDLNKCEPWQLPGRAKM 68

Query: 80  GLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK--GYKKIL 136
           G    +FF    + Y TG R  R     E G    W  TGK R +F        G KK L
Sbjct: 69  GEKEWYFFSLRDRKYPTGLRTNRAT---EAG---YWKATGKDREIFSSKTCALVGMKKTL 122

Query: 137 VLYTNYGKQKKPEKTNWVMHQYHLGG-------NEEEKDGELVVSKVFYQTQPRQCG 186
           V Y   G+  K EK+NWVMH+Y L G       +   KD E V+S+VF +T     G
Sbjct: 123 VFYK--GRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKD-EWVISRVFQKTTLASTG 176

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Controls leaf margin development and required for leaf serration. Involved in axillary meristem initiation and separation of the meristem from the main stem. Regulates the phyllotaxy throughout the plant development. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score = 70.5 bits (171), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 69/149 (46%), Gaps = 18/149 (12%)

Query: 14  IHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKL 73
           + +L  LP G +F PTD+EL+ H   +  A      P+I E          +    P +L
Sbjct: 1   MSELLQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEI--------DLYKYDPWEL 52

Query: 74  PGVSKDGLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGY 132
           PG++  G    +F  P  + Y  G+R  R        G   W  TG  +P+ +   V G 
Sbjct: 53  PGLALYGEKEWYFFSPRDRKYPNGSRPNR------SAGSGYWKATGADKPIGLPKPV-GI 105

Query: 133 KKILVLYTNYGKQKKPEKTNWVMHQYHLG 161
           KK LV Y   GK  K EKTNW+MH+Y L 
Sbjct: 106 KKALVFYA--GKAPKGEKTNWIMHEYRLA 132

Arabidopsis thaliana (taxid: 3702)

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score = 65.1 bits (157), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 25/146 (17%)

Query: 21  PAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVS--- 77
           P G +F P D+E+++H       D+   H  +DE I T++    IC   P  LP  S   
Sbjct: 4   PVGFRFRPNDEEIVDHYLRPKNLDSDTSH--VDEVISTVD----ICSFEPWDLPSKSMIK 57

Query: 78  -KDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFI--GGKVK-GYK 133
            +DG + +FF      Y  G ++RR+ ++        W KTGKT  V    G + K G K
Sbjct: 58  SRDG-VWYFFSVKEMKYNRGDQQRRRTNSG------FWKKTGKTMTVMRKRGNREKIGEK 110

Query: 134 KILVLYTNYGKQKKPEKTNWVMHQYH 159
           ++LV      K +   KT+WVMH+YH
Sbjct: 111 RVLVF-----KNRDGSKTDWVMHEYH 131

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 22/145 (15%)

Query: 20  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 79
           LPAG +F PTD+EL++    +  A  +   P+I E          +   +P +LP +S  
Sbjct: 7   LPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEI--------DLYKFNPWELPEMSLY 58

Query: 80  GLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK--GYKKIL 136
           G    +F  P  + Y  G+R  R        G   W  TG  +P+   GK K  G KK L
Sbjct: 59  GEKEWYFFSPRDRKYPNGSRPNRA------AGTGYWKATGADKPI---GKPKTLGIKKAL 109

Query: 137 VLYTNYGKQKKPEKTNWVMHQYHLG 161
           V Y   GK  K  KTNW+MH+Y L 
Sbjct: 110 VFYA--GKAPKGIKTNWIMHEYRLA 132

Arabidopsis thaliana (taxid: 3702)

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 25/172 (14%)

Query: 17  LPGLPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPG 75
           +  L  G +F PTD+EL+ + L+ KV     K   +             I  + P  LP 
Sbjct: 6   VTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAI---------SVTDIYKSEPWDLPD 56

Query: 76  VSK---DGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGY 132
            SK     L  +FF    K Y+ G++  R     E+G    W  TGK R +  G +V G 
Sbjct: 57  KSKLKSRDLEWYFFSMLDKKYSNGSKTNRAT---EKG---YWKTTGKDREIRNGSRVVGM 110

Query: 133 KKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDG----ELVVSKVFYQT 180
           KK LV +   G+  + E+TNWVMH+Y L   + +K G      V+ ++F ++
Sbjct: 111 KKTLVYHK--GRAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKS 160

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S851|NAC31_ARATH Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1

 Score = 63.2 bits (152), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 32/177 (18%)

Query: 19  GLPAGVKFDPTDQELLE-HLEAKVRADARKLHPLIDEFIPTLEG----ENGICYTHPEKL 73
           GLP G +F PTD+EL+  +L +K+             F   L G    E  +    P +L
Sbjct: 21  GLPPGFRFHPTDEELITFYLASKI-------------FHGGLSGIHISEVDLNRCEPWEL 67

Query: 74  PGVSKDGLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFI--GGKVK 130
           P ++K G    +F+    + Y TG R  R            W  TGK + VF   GG++ 
Sbjct: 68  PEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAG------YWKATGKDKEVFSGGGGQLV 121

Query: 131 GYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDG---ELVVSKVFYQTQPRQ 184
           G KK LV Y   G+  +  KT WVMH+Y L  +   +     E V+ +VF +T  R+
Sbjct: 122 GMKKTLVFYK--GRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRK 176

Transcription activator. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for axillary meristem initiation and separation of the meristem from the main stem. May act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 25/178 (14%)

Query: 19  GLPAGVKFDPTDQELLE-HLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVS 77
           G+P G +F PTD+ELL  +L+ K+  +  ++  + +  +  +E         P  L    
Sbjct: 7   GVPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIE---------PWDLQDRC 57

Query: 78  KDGLI----RHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYK 133
           K G       +FF    + Y TG+R  R  H+        W  TG+ + +    K  G +
Sbjct: 58  KIGSTPQNEWYFFSHKDRKYPTGSRTNRATHSG------FWKATGRDKCIRNSYKKIGMR 111

Query: 134 KILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEE--KDGELVVSKVFYQTQPRQCGNSV 189
           K LV Y   G+    +KT+W+MH+Y +   E++  +DG  VV +VF +    + GN V
Sbjct: 112 KTLVFYK--GRAPHGQKTDWIMHEYRIEDTEDDPCEDG-WVVCRVFKKKNLFKVGNDV 166

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7F2L3|NAC48_ORYSJ NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 63/143 (44%), Gaps = 18/143 (12%)

Query: 20  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 79
           LP G +F PTD+EL+ H   +  A      P+I E          +    P +LP ++  
Sbjct: 9   LPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEI--------DLYKFDPWQLPRMALY 60

Query: 80  GLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVL 138
           G    +F  P  + Y  G+R  R        G   W  TG  +PV    K    KK LV 
Sbjct: 61  GEKEWYFFSPRDRKYPNGSRPNR------AAGSGYWKATGADKPVG-SPKPVAIKKALVF 113

Query: 139 YTNYGKQKKPEKTNWVMHQYHLG 161
           Y   GK  K EKTNW+MH+Y L 
Sbjct: 114 YA--GKAPKGEKTNWIMHEYRLA 134

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
255553617	294	transcription factor, putative [Ricinus	0.926	0.812	0.809	1e-110
224133394	299	NAC domain protein, IPR003441 [Populus t	0.949	0.819	0.786	1e-109
225446463	303	PREDICTED: NAC domain-containing protein	0.922	0.785	0.788	1e-103
147833459	796	hypothetical protein VITISV_029763 [Viti	0.926	0.300	0.763	1e-101
224092948	298	NAC domain protein, IPR003441 [Populus t	0.949	0.822	0.777	1e-101
225443590	312	PREDICTED: NAC domain-containing protein	0.926	0.766	0.763	1e-100
297740435	311	unnamed protein product [Vitis vinifera]	0.883	0.733	0.784	1e-99
356521416	326	PREDICTED: NAC domain-containing protein	0.934	0.739	0.734	2e-99
255536709	305	NAC domain-containing protein 21/22, put	0.860	0.727	0.765	3e-99
56201848	333	no apical meristem (NAM) protein-like [O	0.926	0.717	0.699	3e-98

>gi|255553617|ref|XP_002517849.1| transcription factor, putative [Ricinus communis] gi|223542831|gb|EEF44367.1| transcription factor, putative [Ricinus communis]

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/252 (80%), Positives = 221/252 (87%), Gaps = 13/252 (5%)

Query: 11  KARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHP 70
           +ARIHDLPGLPAGVKFDPTDQELLEHLE KV++DARKLHPLIDEFIPT+EGENGICYTHP
Sbjct: 52  QARIHDLPGLPAGVKFDPTDQELLEHLEGKVKSDARKLHPLIDEFIPTIEGENGICYTHP 111

Query: 71  EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK 130
           EKLPGVSKDGL+RHFFHRPSKAYTTGTRKRRKVHTD +GGETRWHKTGKTRPVF+GGKVK
Sbjct: 112 EKLPGVSKDGLVRHFFHRPSKAYTTGTRKRRKVHTDTEGGETRWHKTGKTRPVFVGGKVK 171

Query: 131 GYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVI 190
           GYKKILVLYTNYGKQ+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG S++
Sbjct: 172 GYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCG-SIM 230

Query: 191 KDSSSLPPKFNINKGQSGLDGLKN---NPGVVDYYNPPFIAFDQGGGQNRASPPQALIPP 247
           KD  S+P K    KGQS  +   N   N  +V+YY P FI+FDQ GGQ R +PPQ L  P
Sbjct: 231 KD--SIPSKL---KGQSVHEVANNSLKNATLVEYYTPSFISFDQ-GGQTRPNPPQLL--P 282

Query: 248 HFAAHD-TSFIP 258
           HFA HD +SFIP
Sbjct: 283 HFAVHDGSSFIP 294

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133394|ref|XP_002328031.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222837440|gb|EEE75819.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/253 (78%), Positives = 220/253 (86%), Gaps = 8/253 (3%)

Query: 11  KARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHP 70
           +ARIHDLPGLPAGVKFDPTDQELLEHLE KV++D RK+HPLIDEFIPT++GENGICYTHP
Sbjct: 50  QARIHDLPGLPAGVKFDPTDQELLEHLEGKVKSDTRKVHPLIDEFIPTIDGENGICYTHP 109

Query: 71  EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK 130
           EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTD +GGETRWHKTGKTRPV +GGKVK
Sbjct: 110 EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDTEGGETRWHKTGKTRPVLVGGKVK 169

Query: 131 GYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVI 190
           GYKKILVLYTNYGKQ+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG S+I
Sbjct: 170 GYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCG-SLI 228

Query: 191 KDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNP-PFIAFDQGGGQNRAS---PPQALIP 246
           KDS S+P K  +         LKN+  +V+YY+P  FI+FDQ  GQNR++   PPQ L+ 
Sbjct: 229 KDSVSVPSKLKVQSSGHEGSNLKNSTTLVEYYHPSSFISFDQ-SGQNRSTNPNPPQQLL- 286

Query: 247 PHFAAHD-TSFIP 258
            HFA HD +SFIP
Sbjct: 287 SHFAVHDGSSFIP 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446463|ref|XP_002275319.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera] gi|302143344|emb|CBI21905.3| unnamed protein product [Vitis vinifera]

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/246 (78%), Positives = 208/246 (84%), Gaps = 8/246 (3%)

Query: 11  KARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHP 70
           +ARIHDLPGLPAGVKFDPTDQELLEHL+ KVR D  KLHPLIDEFIPTLEGENGICYTHP
Sbjct: 51  QARIHDLPGLPAGVKFDPTDQELLEHLDGKVRCDDHKLHPLIDEFIPTLEGENGICYTHP 110

Query: 71  EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK 130
           EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKV TD  GGETRWHKTGKTRPVF+GGKVK
Sbjct: 111 EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVSTDSDGGETRWHKTGKTRPVFVGGKVK 170

Query: 131 GYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVI 190
           GYKKILVLYTNYGKQ+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQC +S++
Sbjct: 171 GYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQC-SSIM 229

Query: 191 KDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNP-PFIAFDQGGGQNRASPPQALIPPHF 249
           KD  SLP K   +        L+NN  +V+YYNP  FI+FDQ G QNR S   A + P+F
Sbjct: 230 KD--SLPSKLKDHHSGHESPNLRNN-ALVEYYNPNSFISFDQ-GSQNRLS--HARLIPNF 283

Query: 250 AAHDTS 255
             HD S
Sbjct: 284 TVHDGS 289

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147833459|emb|CAN77470.1| hypothetical protein VITISV_029763 [Vitis vinifera]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/249 (76%), Positives = 208/249 (83%), Gaps = 10/249 (4%)

Query: 11  KARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHP 70
           +A IHDLPGLPAGVKFDPTDQE+LEHLEAKV +D  K HPLIDEFIPTLEGENGICYTHP
Sbjct: 535 QAGIHDLPGLPAGVKFDPTDQEILEHLEAKVLSDTHKTHPLIDEFIPTLEGENGICYTHP 594

Query: 71  EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK 130
           EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHT+E GGETRWHKTGKTRPVF+GG VK
Sbjct: 595 EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTNEDGGETRWHKTGKTRPVFVGGAVK 654

Query: 131 GYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVI 190
           G+KKILVLYTNYG+Q+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG S I
Sbjct: 655 GFKKILVLYTNYGRQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGLS-I 713

Query: 191 KDSSSLPPKFNINKGQSGLDG-LKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPHF 249
           KDS       N +  +S  DG +  +  +V+YY+P FI++DQ    NR SPPQ LIP   
Sbjct: 714 KDSLD-----NKSNSRSAHDGPIIKSAALVEYYHPSFISYDQ-VSHNRESPPQ-LIPNLV 766

Query: 250 AAHD-TSFI 257
              D +SFI
Sbjct: 767 VQGDGSSFI 775

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092948|ref|XP_002309767.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222852670|gb|EEE90217.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/252 (77%), Positives = 216/252 (85%), Gaps = 7/252 (2%)

Query: 11  KARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHP 70
           +ARIHDLPGLPAGVKFDPTD ELLEHLE KV++D  K+HPLIDEFIPT++GENGICYTHP
Sbjct: 50  QARIHDLPGLPAGVKFDPTDLELLEHLEGKVKSDTCKVHPLIDEFIPTIDGENGICYTHP 109

Query: 71  EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK 130
           EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTD +GGETRWHKTGKTRPV + GKVK
Sbjct: 110 EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDTEGGETRWHKTGKTRPVVVVGKVK 169

Query: 131 GYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVI 190
           GYKKILVLYTNYGKQ+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG S+I
Sbjct: 170 GYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCG-SLI 228

Query: 191 KDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRAS---PPQALIPP 247
           KDS  +P K  +         LKN+  +V+YYNP FI+FDQ  GQNR++   PPQ L+ P
Sbjct: 229 KDSVPVPSKLKVQSSGHEGSNLKNSTTLVEYYNPSFISFDQ-SGQNRSTNPNPPQQLL-P 286

Query: 248 HFAAHD-TSFIP 258
           HFA HD +S IP
Sbjct: 287 HFALHDGSSLIP 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443590|ref|XP_002278661.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/249 (76%), Positives = 208/249 (83%), Gaps = 10/249 (4%)

Query: 11  KARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHP 70
           +A IHDLPGLPAGVKFDPTDQE+LEHLEAKV +D  K HPLIDEFIPTLEGENGICYTHP
Sbjct: 51  QAGIHDLPGLPAGVKFDPTDQEILEHLEAKVLSDTHKTHPLIDEFIPTLEGENGICYTHP 110

Query: 71  EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK 130
           EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHT+E GGETRWHKTGKTRPVF+GG VK
Sbjct: 111 EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTNEDGGETRWHKTGKTRPVFVGGAVK 170

Query: 131 GYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVI 190
           G+KKILVLYTNYG+Q+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG S I
Sbjct: 171 GFKKILVLYTNYGRQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGLS-I 229

Query: 191 KDSSSLPPKFNINKGQSGLDG-LKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPHF 249
           KDS       N +  +S  DG +  +  +V+YY+P FI++DQ    NR SPPQ LIP   
Sbjct: 230 KDSLD-----NKSNSRSAHDGPIIKSAALVEYYHPSFISYDQ-VSHNRESPPQ-LIPNLV 282

Query: 250 AAHD-TSFI 257
              D +SFI
Sbjct: 283 VQGDGSSFI 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740435|emb|CBI30617.3| unnamed protein product [Vitis vinifera]

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 186/237 (78%), Positives = 203/237 (85%), Gaps = 9/237 (3%)

Query: 11  KARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHP 70
           +A IHDLPGLPAGVKFDPTDQE+LEHLEAKV +D  K HPLIDEFIPTLEGENGICYTHP
Sbjct: 51  QAGIHDLPGLPAGVKFDPTDQEILEHLEAKVLSDTHKTHPLIDEFIPTLEGENGICYTHP 110

Query: 71  EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK 130
           EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHT+E GGETRWHKTGKTRPVF+GG VK
Sbjct: 111 EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTNEDGGETRWHKTGKTRPVFVGGAVK 170

Query: 131 GYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVI 190
           G+KKILVLYTNYG+Q+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG S I
Sbjct: 171 GFKKILVLYTNYGRQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGLS-I 229

Query: 191 KDSSSLPPKFNINKGQSGLDG-LKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIP 246
           KDS       N +  +S  DG +  +  +V+YY+P FI++DQ    NR SPPQ LIP
Sbjct: 230 KDSLD-----NKSNSRSAHDGPIIKSAALVEYYHPSFISYDQ-VSHNRESPPQ-LIP 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521416|ref|XP_003529352.1| PREDICTED: NAC domain-containing protein 8-like [Glycine max]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 183/249 (73%), Positives = 199/249 (79%), Gaps = 8/249 (3%)

Query: 14  IHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKL 73
           I+DLPGLPAGVKFDP DQE+LEHLEAKV +D  KLHPLIDEFIPTLEGENGICYTHPEKL
Sbjct: 62  INDLPGLPAGVKFDPNDQEILEHLEAKVLSDVPKLHPLIDEFIPTLEGENGICYTHPEKL 121

Query: 74  PGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYK 133
           PGV KDG IRHFFHRPSKAYTTGTRKRRKVHTDE+G ETRWHKTGKTRPVF+GG VKG+K
Sbjct: 122 PGVRKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGAVKGFK 181

Query: 134 KILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDS 193
           KILVLYTNYG+QKKPEKTNWVMHQYHLG +EEEKDGELVVSKVFYQTQPRQCGNS+IK  
Sbjct: 182 KILVLYTNYGRQKKPEKTNWVMHQYHLGTSEEEKDGELVVSKVFYQTQPRQCGNSIIKQD 241

Query: 194 SSLPPKFNINKGQSGLDG------LKNNPGVVDYYNPPFIAFDQ-GGGQNRASPPQALIP 246
                +   N+     D         N   ++DYYNP FI +DQ GG  NR + PQ LIP
Sbjct: 242 LYDEERLMTNQSVHNDDDNNIIPRNNNASALMDYYNPSFINYDQLGGRSNRENSPQ-LIP 300

Query: 247 PHFAAHDTS 255
                 D+S
Sbjct: 301 NLVMQGDSS 309

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255536709|ref|XP_002509421.1| NAC domain-containing protein 21/22, putative [Ricinus communis] gi|223549320|gb|EEF50808.1| NAC domain-containing protein 21/22, putative [Ricinus communis]

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 180/235 (76%), Positives = 191/235 (81%), Gaps = 13/235 (5%)

Query: 12  ARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPE 71
           A I DLPGLPAGVKFDPTDQE+LEHLEAKV +D RKLHPLIDEFIPTLEGENGICYTHPE
Sbjct: 58  AGIQDLPGLPAGVKFDPTDQEILEHLEAKVLSDTRKLHPLIDEFIPTLEGENGICYTHPE 117

Query: 72  KLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKG 131
           KLPGVS DG IRHFFHRPSKAYTTGTRKRRKVHTDE G ETRWHKTGKTRPV  GG VKG
Sbjct: 118 KLPGVSNDGQIRHFFHRPSKAYTTGTRKRRKVHTDEDGSETRWHKTGKTRPVVSGGMVKG 177

Query: 132 YKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIK 191
           +KKILVLYTNYG+QKKPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG S+  
Sbjct: 178 FKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGTSM-- 235

Query: 192 DSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIP 246
                      N+     + +  +P  VDYYNP FI++D     NR SPPQ LIP
Sbjct: 236 ----------TNRSSDDNNPIATHPSFVDYYNPAFISYDHHESHNRESPPQ-LIP 279

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|56201848|dbj|BAD73298.1| no apical meristem (NAM) protein-like [Oryza sativa Japonica Group] gi|56202085|dbj|BAD73614.1| no apical meristem (NAM) protein-like [Oryza sativa Japonica Group] gi|215735000|dbj|BAG95722.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  363 bits (933), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 184/263 (69%), Positives = 197/263 (74%), Gaps = 24/263 (9%)

Query: 14  IHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKL 73
           I DLPGLPAGVKFDPTDQELLEHLE K R DARKLHPLIDEFIPT+EGENGICYTHPE+L
Sbjct: 63  IQDLPGLPAGVKFDPTDQELLEHLEGKARPDARKLHPLIDEFIPTIEGENGICYTHPERL 122

Query: 74  PGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYK 133
           PGV KDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVF GGK+KGYK
Sbjct: 123 PGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFTGGKLKGYK 182

Query: 134 KILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGN---SVI 190
           KILVLYTNYGKQ+KPEKTNWVMHQYHLG +EEEKDGELVVSKVFYQTQPRQCG    +  
Sbjct: 183 KILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKDGELVVSKVFYQTQPRQCGGGSAATA 242

Query: 191 KD-SSSLPPKFNINKGQSGLDG------------------LKNNPGVVDYYNP--PFIAF 229
           KD S  L    NI    +  +                   LK   G+VD+YNP    I +
Sbjct: 243 KDLSVDLVAGNNIKASNAAAEHHHNDGVGGGGHGGNNSSMLKEAAGIVDFYNPAAALIGY 302

Query: 230 DQGGGQNRASPPQALIPPHFAAH 252
            Q    NRA+    L  P+F  H
Sbjct: 303 SQAAPNNRAAASAHLTMPNFEVH 325

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
TAIR|locus:2121387	305	NAC073 "NAC domain containing	0.693	0.586	0.872	1.7e-90
TAIR|locus:2032580	314	NAC010 "NAC domain containing	0.755	0.621	0.760	1.2e-79
TAIR|locus:2118264	498	NAC075 "NAC domain containing	0.693	0.359	0.767	1.5e-74
TAIR|locus:2165031	386	NAC099 "NAC domain containing	0.647	0.432	0.735	1.4e-69
TAIR|locus:2031170	449	SOG1 "SUPPRESSOR OF GAMMA RADI	0.635	0.365	0.590	1.7e-52
TAIR|locus:2145743	350	NAC085 "NAC domain containing	0.682	0.502	0.536	3.4e-45
TAIR|locus:2084148	370	NAC044 "NAC domain containing	0.821	0.572	0.445	1.5e-42
TAIR|locus:2172334	335	ANAC087 "Arabidopsis NAC domai	0.848	0.653	0.291	8.9e-16
TAIR|locus:2095958	338	NAC046 "NAC domain containing	0.829	0.633	0.318	1.2e-15
TAIR|locus:2164895	285	NAC6 "NAC domain containing pr	0.658	0.596	0.348	2.9e-13

TAIR|locus:2121387 NAC073 "NAC domain containing protein 73" [Arabidopsis thaliana (taxid:3702)]

 Score = 866 (309.9 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
 Identities = 157/180 (87%), Positives = 168/180 (93%)

Query:    11 KARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHP 70
             +A IHDLPGLPAGVKFDPTDQE+LEHLE KVR DA+KLHPLIDEFI T++GENGICYTHP
Sbjct:    50 QAGIHDLPGLPAGVKFDPTDQEVLEHLEGKVRDDAKKLHPLIDEFIRTIDGENGICYTHP 109

Query:    71 EKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQ-GGETRWHKTGKTRPVFIGGKV 129
             EKLPGV+KDG +RHFFHRPSKAYTTGTRKRRKVHTD   GGETRWHKTGKTRPV  GG+V
Sbjct:   110 EKLPGVNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKTRPVLAGGRV 169

Query:   130 KGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSV 189
             +GYKKILVLYTNYGKQKKPEKTNWVMHQYHLG +EEEK+GELVVSKVFYQTQPRQCG SV
Sbjct:   170 RGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGTSEEEKEGELVVSKVFYQTQPRQCGGSV 229

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2032580 NAC010 "NAC domain containing protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
 Identities = 149/196 (76%), Positives = 166/196 (84%)

Query:    14 IHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKL 73
             I DLP LPAGVKFDP+D+E+L HLEAKV +D RKLHPLIDEFIPTLEGENGICYTHPEKL
Sbjct:    71 IKDLPSLPAGVKFDPSDKEILMHLEAKVSSDKRKLHPLIDEFIPTLEGENGICYTHPEKL 130

Query:    74 PGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYK 133
             PGVSKDG +RHFFHRPSKAYTTGTRKRRKV TDE+G ETRWHKTGKTRPV       G+K
Sbjct:   131 PGVSKDGQVRHFFHRPSKAYTTGTRKRRKVSTDEEGHETRWHKTGKTRPVLSQSGETGFK 190

Query:   134 KILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDS 193
             KILVLYTNYG+QKKPEKTNWVMHQYHLG +E+EKDGE V+SKVFYQTQPRQCG+   K  
Sbjct:   191 KILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEKDGEPVLSKVFYQTQPRQCGSMEPKPK 250

Query:   194 SSLP-PKFNINKGQSG 208
             + +   +F+    Q+G
Sbjct:   251 NLVNLNRFSYENIQAG 266

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2118264 NAC075 "NAC domain containing protein 75" [Arabidopsis thaliana (taxid:3702)]

 Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
 Identities = 145/189 (76%), Positives = 159/189 (84%)

Query:    16 DLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPG 75
             D  GLPAGVKFDPTDQEL+EHLEAKV A   K HPLIDEFIPT+EGE+GICYTHPEKLPG
Sbjct:    44 DWVGLPAGVKFDPTDQELIEHLEAKVLAKDFKSHPLIDEFIPTIEGEDGICYTHPEKLPG 103

Query:    76 VSKDGLIRHFFHRPSKAYTTGTRKRRKVHTD----EQG----GETRWHKTGKTRPVFIGG 127
             V++DGL RHFFHRPSKAYTTGTRKRRK+ T+     QG    GETRWHKTGKTRPV + G
Sbjct:   104 VTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDNNLQGSSSSGETRWHKTGKTRPVMVNG 163

Query:   128 KVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGN 187
             K KG KKILVLYTN+GK +KPEKTNWVMHQYHLG +EEEK+GELVVSK+FYQTQPRQC  
Sbjct:   164 KQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGTHEEEKEGELVVSKIFYQTQPRQCNW 223

Query:   188 SVIKDSSSL 196
             S    +SSL
Sbjct:   224 S--SSTSSL 230

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2165031 NAC099 "NAC domain containing protein 99" [Arabidopsis thaliana (taxid:3702)]

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 131/178 (73%), Positives = 153/178 (85%)

Query:    19 GLPAGVKFDPTDQELLEHLEAKVRA--DARKL---HPLIDEFIPTLEGENGICYTHPEKL 73
             GLPAGVKFDPTDQEL+EHLEAKV+   + +K    HPLIDEFIPT++GE+GICYTHP+KL
Sbjct:    42 GLPAGVKFDPTDQELIEHLEAKVKGKEENKKWSSSHPLIDEFIPTIDGEDGICYTHPQKL 101

Query:    74 PGVSKDGLIRHFFHRPSKAYTTGTRKRRKV----HTDEQGG--ETRWHKTGKTRPVFIGG 127
             PGV++DGL +HFFH+PS+AYTTGTRKRRK+    H  E  G  ETRWHKTGKTRPV I G
Sbjct:   102 PGVTRDGLSKHFFHKPSRAYTTGTRKRRKIIQTDHDSELTGSSETRWHKTGKTRPVMING 161

Query:   128 KVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQC 185
             + +G KKILVLYTN+GK ++PEKTNWVMHQYHLG NEEE++GELVVSK+FYQTQPRQC
Sbjct:   162 QQRGCKKILVLYTNFGKNRRPEKTNWVMHQYHLGINEEEREGELVVSKIFYQTQPRQC 219

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2031170 SOG1 "SUPPRESSOR OF GAMMA RADIATION 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 101/171 (59%), Positives = 125/171 (73%)

Query:    14 IHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKL 73
             + D PGLP GVKFDP+D E++ HL AK        HP IDEFIPT+  ++GICYTHP+ L
Sbjct:    52 VDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQDDGICYTHPKNL 111

Query:    74 PGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYK 133
             PGV  DG + HFFH+  KAY+TGTRKRRK+H D+  G+ RWHKTG+T+PV + G  +G K
Sbjct:   112 PGVKSDGTVSHFFHKAIKAYSTGTRKRRKIH-DDDFGDVRWHKTGRTKPVVLDGVQRGCK 170

Query:   134 KILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQ 184
             KI+VLY       K  KTNWVMHQYHLG  E+EK+G+ VVSK+FYQ QP+Q
Sbjct:   171 KIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVSKIFYQ-QPQQ 215

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0000077 "DNA damage checkpoint" evidence=IMP

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0010332 "response to gamma radiation" evidence=IMP

TAIR|locus:2145743 NAC085 "NAC domain containing protein 85" [Arabidopsis thaliana (taxid:3702)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 96/179 (53%), Positives = 124/179 (69%)

Query:    18 PGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVS 77
             PGLP GVKF+PTD+E++EHLEAK   D  K H LI +FI ++  + GI YTHP+ LPGVS
Sbjct:    56 PGLPKGVKFEPTDEEVIEHLEAKCGIDGLKPHLLIQDFICSVTQDVGINYTHPQNLPGVS 115

Query:    78 KDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGET-RWHKTGKTRPVFIGGKVKGYKKIL 136
             KDG    FF++ + AY  G RKRR++       +T RWHKTG+T+PV + G  KG KKI+
Sbjct:   116 KDGTSVFFFNKTAHAYQNGQRKRRRITPTSLKDDTVRWHKTGQTKPVMLNGIQKGCKKIM 175

Query:   137 VLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDSSS 195
             VLY +  K  KPEK+NWV+HQYHLG  EE + GE VVSK+ YQ QP+Q   ++ +  SS
Sbjct:   176 VLYKSARKGFKPEKSNWVLHQYHLG-TEEGEIGEYVVSKITYQ-QPKQQEKTIDESESS 232

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2084148 NAC044 "NAC domain containing protein 44" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 99/222 (44%), Positives = 133/222 (59%)

Query:    18 PGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVS 77
             PGLP GVKF+PTD++++E LEAK      + H LI+EFI  +  + GI YTHP+ LPG +
Sbjct:    53 PGLPKGVKFEPTDEDIIEFLEAKCGIGGSEPHVLIEEFIRPVTEDVGINYTHPQNLPGAN 112

Query:    78 KDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGE-TRWHKTGKTRPVFIGGKVKGYKKIL 136
             KDG+   FFH+  +AY TG RKRRK+       E  RWHKTG+T+PV + G  +G KKI+
Sbjct:   113 KDGVSVFFFHKTVQAYGTGQRKRRKITPTLVNDEPVRWHKTGRTKPVMLSGVQRGCKKIM 172

Query:   137 VLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQ-----PRQCGNSVIK 191
             VLY +  K  KPEK+NWV+HQYHLG  E ++ G+ VVSK+ YQ Q     P +  +S   
Sbjct:   173 VLYKSARKGTKPEKSNWVLHQYHLG-TEGKEIGDYVVSKITYQQQKLGENPDEGESSSGV 231

Query:   192 DSSSLPPKFNINKGQSGLDGLKNNPGVVD---YYNPPFIAFD 230
                   PK N     S +DG+  +    D    ++P F   D
Sbjct:   232 RGGPTTPKTNTPTPPSLVDGVAGDEEAFDDLKMFDPFFEELD 273

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2172334 ANAC087 "Arabidopsis NAC domain containing protein 87" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 8.9e-16, P = 8.9e-16
 Identities = 75/257 (29%), Positives = 115/257 (44%)

Query:    16 DLPGLPAGVKFDPTDQELLE-HLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLP 74
             +L  LP G +F PTD+E++  +L+ KV         L   F     GE  +    P  LP
Sbjct:    17 ELVDLPPGFRFHPTDEEIITCYLKEKV---------LNSRFTAVAMGEADLNKCEPWDLP 67

Query:    75 GVSKDGLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIG-GKVKGY 132
               +K G    +FF +  + Y TG R  R     E G    W  TGK + +F G G + G 
Sbjct:    68 KRAKMGEKEFYFFCQRDRKYPTGMRTNRAT---ESG---YWKATGKDKEIFKGKGCLVGM 121

Query:   133 KKILVLYTNYGKQKKPEKTNWVMHQYHLGGN-------EEEKDGELVVSKVFYQTQPRQC 185
             KK LV Y   G+  K EKTNWVMH+Y L G        +  +D E VV +VF++  P   
Sbjct:   122 KKTLVFYR--GRAPKGEKTNWVMHEYRLEGKYSYYNLPKSARD-EWVVCRVFHKNNP--- 175

Query:   186 GNSVIKDSSSLPPK-FNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPP--- 241
              ++  +  + +P + F        +D L +   +    +P F++  +       +PP   
Sbjct:   176 -STTTQPMTRIPVEDFTRMDSLENIDHLLDFSSLPPLIDPSFMSQTEQPNFKPINPPTYD 234

Query:   242 --QALIPPHFAAHDTSF 256
                 + P HF ++ + F
Sbjct:   235 ISSPIQPHHFNSYQSIF 251

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

TAIR|locus:2095958 NAC046 "NAC domain containing protein 46" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 80/251 (31%), Positives = 112/251 (44%)

Query:    20 LPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 78
             LP G +F PTD+E++ H L+ KV  + R        F     G+  +    P  LP ++K
Sbjct:    20 LPPGFRFHPTDEEIITHYLKEKV-FNIR--------FTAAAIGQADLNKNEPWDLPKIAK 70

Query:    79 DGLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIG-GKVKGYKKIL 136
              G    +FF +  + Y TG R  R   +        W  TGK + +F G G + G KK L
Sbjct:    71 MGEKEFYFFCQRDRKYPTGMRTNRATVSGY------WKATGKDKEIFRGKGCLVGMKKTL 124

Query:   137 VLYTNYGKQKKPEKTNWVMHQYHLGGN-------EEEKDGELVVSKVFYQTQPRQCGNSV 189
             V YT  G+  K EKTNWVMH+Y L G        +  +D E VV +VF++  P     + 
Sbjct:   125 VFYT--GRAPKGEKTNWVMHEYRLDGKYSYHNLPKTARD-EWVVCRVFHKNAPSTTITTT 181

Query:   190 IKDSSSLPPKFNINK--GQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPP 247
              K  S +    NI+     S L  L + PG +    P F     G  Q     P  L  P
Sbjct:   182 -KQLSRIDSLDNIDHLLDFSSLPPLID-PGFLGQPGPSF----SGARQQHDLKP-VLHHP 234

Query:   248 HFAAHDTSFIP 258
               A  D +++P
Sbjct:   235 TTAPVDNTYLP 245

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010286 "heat acclimation" evidence=RCA

TAIR|locus:2164895 NAC6 "NAC domain containing protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 2.9e-13, P = 2.9e-13
 Identities = 70/201 (34%), Positives = 87/201 (43%)

Query:    20 LPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 78
             LP G +F PTD+EL+ H L+ KV             F  T  GE  +    P  LP  +K
Sbjct:    20 LPPGFRFHPTDEELITHYLKPKV---------FNTFFSATAIGEVDLNKIEPWDLPWKAK 70

Query:    79 DGLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILV 137
              G    +FF    + Y TG R  R     E G    W  TGK + +F G  + G KK LV
Sbjct:    71 MGEKEWYFFCVRDRKYPTGLRTNRAT---EAG---YWKATGKDKEIFKGKSLVGMKKTLV 124

Query:   138 LYTNYGKQKKPEKTNWVMHQYHLGGN------EEEKDGELVVSKVFYQTQPRQCGNSVIK 191
              Y   G+  K  KTNWVMH+Y L G        +    E V+ +VF   Q R  G  V  
Sbjct:   125 FYK--GRAPKGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVF---QKRADGTKV-- 177

Query:   192 DSSSLPPKFNINKGQSGLDGL 212
               S L P  N     +GL  L
Sbjct:   178 PMSMLDPHIN-RMEPAGLPSL 197

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IPI

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0010150 "leaf senescence" evidence=IEP;IMP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009743 "response to carbohydrate stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	258
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	9e-40

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  133 bits (338), Expect = 9e-40
 Identities = 53/146 (36%), Positives = 69/146 (47%), Gaps = 20/146 (13%)

Query: 20  LPAGVKFDPTDQELL-EHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 78
           LP G +F PTD+EL+  +L+ KV          + + IP +     I    P  LP    
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLG----KPLPLLDVIPEV----DIYKFEPWDLPDGKA 52

Query: 79  DGLIR--HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFI-GGKVKGYKKI 135
            G  R  +FF    + Y  G+R  R        G   W  TGK +PV   GG+V G KK 
Sbjct: 53  KGGDREWYFFSPRDRKYPNGSRTNRAT------GSGYWKATGKDKPVLSKGGEVVGMKKT 106

Query: 136 LVLYTNYGKQKKPEKTNWVMHQYHLG 161
           LV Y   G+  K EKT+WVMH+Y L 
Sbjct: 107 LVFYK--GRAPKGEKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	258
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=6e-38  Score=255.94  Aligned_cols=125  Identities=41%  Similarity=0.710  Sum_probs=88.5

Q ss_pred             CCCceeeCCChHHHHH-HHHHHHhcCcCCCCCccc-ccccccccccCcCCCCCCCCCcc-ccCCceEEEEecCCCCCCCC
Q 025053           20 LPAGVKFDPTDQELLE-HLEAKVRADARKLHPLID-EFIPTLEGENGICYTHPEKLPGV-SKDGLIRHFFHRPSKAYTTG   96 (258)
Q Consensus        20 LPpGfRF~PTDeELI~-yL~~Kv~g~~~~~~Pl~~-~~I~~vd~e~DVY~~~PweLp~~-~~~g~~~yFF~~~~kk~~~G   96 (258)
                      |||||||+|||+|||. ||++|+.|..     ++. .+|+    ++|||++|||+||.. ...++.||||+++.+++.+|
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~-----~~~~~~i~----~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~   71 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEP-----LPCEDVIH----DVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNG   71 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-H-----HCS-CHSE----E--GGGS-GGGCHHHSSS-SSEEEEEEE--------
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCC-----CCccccee----ecccCccChHHhhhhccCCCceEEEEEecccccCCc
Confidence            8999999999999996 6999999954     333 4564    457999999999943 23456899999998888889


Q ss_pred             CcccccccccCCCCCceEeecCCCceEEe-CCeEEEEEEEEEEEeecCCCCCCCccceEEEEEeeC
Q 025053           97 TRKRRKVHTDEQGGETRWHKTGKTRPVFI-GGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLG  161 (258)
Q Consensus        97 ~R~~R~~~~~~~gg~G~Wk~~G~~k~I~~-~G~vvG~Kk~l~Fy~~~g~~~~g~kT~WvMhEY~L~  161 (258)
                      .|++|++      ++|+||++|+.++|.+ +|.++|+|++|+||.  ++.+++.+|+|+||||+|.
T Consensus        72 ~r~~R~~------~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~--~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   72 GRPNRVT------GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYS--GKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             --S-EEE------TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEE--SSTTS-EEEEEEEEEEEE-
T ss_pred             ccccccc------cceEEeecccccccccccceeeeeEEEEEEEe--ccCCCCCcCCeEEEEEEeC
Confidence            9999975      3799999999999999 999999999999998  7788999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	258
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		4e-11
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-08
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		3e-08

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 20  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 79
           LP G +F PTD EL+EH   +  A  R   P+I         E  +    P  LP  +  
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVPII--------AEVDLYKFDPWDLPERALF 66
Query: 80  GLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVL 138
           G    +F  P  + Y  G+R  R        G   W  TG  +PV   G+  G KK LV 
Sbjct: 67  GAREWYFFTPRDRKYPNGSRPNR------AAGNGYWKATGADKPVAPRGRTLGIKKALVF 120
Query: 139 YTNYGKQKKPEKTNWVMHQYHL 160
           Y   GK  +  KT+W+MH+Y L
Sbjct: 121 YA--GKAPRGVKTDWIMHEYRL 140

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 19  GLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 78
            LP G +F PTD+EL+     +  A          +F   L  E  +    P  LP  + 
Sbjct: 19  SLPPGFRFYPTDEELMVQYLCRKAAGY--------DFSLQLIAEIDLYKFDPWVLPNKAL 70
Query: 79  DGLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILV 137
            G    +F  P  + Y  G+R  R        G   W  TG  + +   G+  G KK LV
Sbjct: 71  FGEKEWYFFSPRDRKYPNGSRPNR------VAGSGYWKATGTDKIISTEGQRVGIKKALV 124
Query: 138 LYTNYGKQKKPEKTNWVMHQYHL 160
            Y   GK  K  KTNW+MH+Y L
Sbjct: 125 FYI--GKAPKGTKTNWIMHEYRL 145

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 17/142 (11%)
Query: 20  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 79
           LP G +F PTD+EL+     +  A          +F   L  E  +    P  LP  +  
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGY--------DFSLQLIAEIDLYKFDPWVLPNKALF 68
Query: 80  GLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVL 138
           G    +F  P  + Y  G+R  R        G   W  TG  + +   G+  G KK LV 
Sbjct: 69  GEKEWYFFSPRDRKYPNGSRPNR------VAGSGYWKATGTDKIISTEGQRVGIKKALVF 122
Query: 139 YTNYGKQKKPEKTNWVMHQYHL 160
           Y   GK  K  KTNW+MH+Y L
Sbjct: 123 YI--GKAPKGTKTNWIMHEYRL 142

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	258
1ut7_A	171	No apical meristem protein; transcription regulati	5e-25
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-24

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score = 96.6 bits (241), Expect = 5e-25
 Identities = 46/171 (26%), Positives = 69/171 (40%), Gaps = 23/171 (13%)

Query: 20  LPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 78
           LP G +F PTD+EL+   L  K        +    + I  ++    +    P  LP  + 
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAA-----GYDFSLQLIAEID----LYKFDPWVLPNKAL 67

Query: 79  DG-LIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILV 137
            G    +FF    + Y  G+R  R       G    W  TG  + +   G+  G KK LV
Sbjct: 68  FGEKEWYFFSPRDRKYPNGSRPNR---VAGSG---YWKATGTDKIISTEGQRVGIKKALV 121

Query: 138 LYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDG----ELVVSKVFYQTQPRQ 184
            Y   GK  K  KTNW+MH+Y L             + V+ +++ +    Q
Sbjct: 122 FYI--GKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ 170

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score = 94.7 bits (236), Expect = 2e-24
 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 28/169 (16%)

Query: 20  LPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 78
           LP G +F PTD EL+EH L  K          L    I  ++    +    P  LP  + 
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAG-----QRLPVPIIAEVD----LYKFDPWDLPERAL 65

Query: 79  -DGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILV 137
                 +FF    + Y  G+R  R       G    W  TG  +PV   G+  G KK LV
Sbjct: 66  FGAREWYFFTPRDRKYPNGSRPNR---AAGNG---YWKATGADKPVAPRGRTLGIKKALV 119

Query: 138 LYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDG---------ELVVSKVF 177
            Y   GK  +  KT+W+MH+Y L        G         + V+ +++
Sbjct: 120 FYA--GKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLY 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	258
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=9.1e-50  Score=341.98  Aligned_cols=153  Identities=31%  Similarity=0.533  Sum_probs=127.7

Q ss_pred             hcccCCCCCCCceeeCCChHHHHHH-HHHHHhcCcCCCCCcccccccccccccCcCCCCCCCCCccccCCc-eEEEEecC
Q 025053           12 ARIHDLPGLPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGL-IRHFFHRP   89 (258)
Q Consensus        12 ~~~~~~~~LPpGfRF~PTDeELI~y-L~~Kv~g~~~~~~Pl~~~~I~~vd~e~DVY~~~PweLp~~~~~g~-~~yFF~~~   89 (258)
                      ..++..++|||||||+|||||||.| |++|+.|.     |++..+|++    +|||.+|||+||+.+..++ +||||+++
T Consensus         7 ~~~~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~-----~~~~~~I~e----vDvy~~~Pw~Lp~~~~~g~~ewYFFs~r   77 (174)
T 3ulx_A            7 RDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQ-----RLPVPIIAE----VDLYKFDPWDLPERALFGAREWYFFTPR   77 (174)
T ss_dssp             --CCSTTTCCTTCCCCCCHHHHHHHTHHHHHHTC-----CCSSSCCEE----CCGGGSCGGGSGGGCSSCSSEEEEEEEC
T ss_pred             cccccccCCCCcceeCCCHHHHHHHHHHHHhcCC-----CCCcCeeee----cccccCCchhhhhhhccCCceEEEEecc
Confidence            3467788999999999999999975 99999984     555677765    5799999999999876554 78999999


Q ss_pred             CCCCCCCCcccccccccCCCCCceEeecCCCceEEeCCeEEEEEEEEEEEeecCCCCCCCccceEEEEEeeCCCCCC---
Q 025053           90 SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEE---  166 (258)
Q Consensus        90 ~kk~~~G~R~~R~~~~~~~gg~G~Wk~~G~~k~I~~~G~vvG~Kk~l~Fy~~~g~~~~g~kT~WvMhEY~L~~~~~~---  166 (258)
                      .++|++|.|++|++.      +|+||++|++++|.++|.+||+||+|+||.  |+++++.||+|+||||+|.++...   
T Consensus        78 ~~ky~~g~R~nR~t~------~G~WkatG~dk~I~~~g~~vG~KktLvFy~--g~~p~g~kT~WvMhEY~L~~~~~~~~~  149 (174)
T 3ulx_A           78 DRKYPNGSRPNRAAG------NGYWKATGADKPVAPRGRTLGIKKALVFYA--GKAPRGVKTDWIMHEYRLADAGRAAAG  149 (174)
T ss_dssp             CC-----CCSCEEET------TEEEEECSCCEEECCSSSCCEEEEEEEEEE--SSTTSCEEEEEEEEEEEECSCC-----
T ss_pred             ccccCCCCCceeecC------CceEccCCCCcEEeeCCcEEEEEEEEEEec--CCCCCCCcCCeEEEEEEeCCCCCcccc
Confidence            999999999999973      699999999999999999999999999999  999999999999999999987532   


Q ss_pred             ------CCCCEEEEEEEEeCC
Q 025053          167 ------KDGELVVSKVFYQTQ  181 (258)
Q Consensus       167 ------~~~~~VLCKI~~k~~  181 (258)
                            ..++|||||||+|..
T Consensus       150 ~~~~~~~~~~wVlCrvf~K~~  170 (174)
T 3ulx_A          150 AKKGSLRLDDWVLCRLYNKKN  170 (174)
T ss_dssp             ------CCSSEEEEEEEESCC
T ss_pred             cccCCCCCCCEEEEEEEEcCC
Confidence                  257899999999865

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=6.2e-50  Score=342.24  Aligned_cols=156  Identities=29%  Similarity=0.451  Sum_probs=125.2

Q ss_pred             hhhcccCCCCCCCceeeCCChHHHHHH-HHHHHhcCcCCCCCcccccccccccccCcCCCCCCCCCccccCC-ceEEEEe
Q 025053           10 FKARIHDLPGLPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDG-LIRHFFH   87 (258)
Q Consensus        10 ~~~~~~~~~~LPpGfRF~PTDeELI~y-L~~Kv~g~~~~~~Pl~~~~I~~vd~e~DVY~~~PweLp~~~~~g-~~~yFF~   87 (258)
                      +|+.......|||||||+|||||||.| |++|+.|     .|++..+|++    +|||.+|||+||+.+..+ .+||||+
T Consensus         7 ~~~~~~~~~~lPpGfRF~PTDeELv~~YL~~K~~g-----~~~~~~~I~e----~Diy~~~Pw~Lp~~~~~g~~ewyFFs   77 (171)
T 1ut7_A            7 QETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAG-----YDFSLQLIAE----IDLYKFDPWVLPNKALFGEKEWYFFS   77 (171)
T ss_dssp             C----CCSSCCCTTEEECCCHHHHHHHTHHHHHTT-----CCCSSCCSEE----CCGGGSCGGGHHHHSSSCSSEEEEEE
T ss_pred             ccCCcccccCCCCcceeCCChHHHHHHHHHHHhcC-----CCCCCCeEee----cccccCChhHhhchhhcCCccEEEEe
Confidence            577778889999999999999999975 9999998     4566677765    579999999999987654 4788999


Q ss_pred             cCCCCCCCCCcccccccccCCCCCceEeecCCCceEEeCCeEEEEEEEEEEEeecCCCCCCCccceEEEEEeeCCCCC--
Q 025053           88 RPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEE--  165 (258)
Q Consensus        88 ~~~kk~~~G~R~~R~~~~~~~gg~G~Wk~~G~~k~I~~~G~vvG~Kk~l~Fy~~~g~~~~g~kT~WvMhEY~L~~~~~--  165 (258)
                      ++.+++++|.|++|++.      +|+||++|++++|.+++.+||+||+|+||.  |+++++.||+|+||||+|.....  
T Consensus        78 ~r~~k~~~g~R~~R~t~------~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~--g~~p~g~kT~WvMhEY~l~~~~~~~  149 (171)
T 1ut7_A           78 PRDRKYPNGSRPNRVAG------SGYWKATGTDKIISTEGQRVGIKKALVFYI--GKAPKGTKTNWIMHEYRLIEPSRRN  149 (171)
T ss_dssp             ECCC-------CCEEET------TEEEEEEEEEEEEEETTEEEEEEEEEEEEE--SSTTSCEEEEEEEEEEEECCCC---
T ss_pred             ccccccCCCCcccccCC------CCEEeccCCCceEEecCcEEEEEEEEEEEc--CcCCCCCcCCeEEEEEEcCCCcccc
Confidence            99999999999999973      699999999999999999999999999999  89999999999999999998752  


Q ss_pred             --CCCCCEEEEEEEEeCCC
Q 025053          166 --EKDGELVVSKVFYQTQP  182 (258)
Q Consensus       166 --~~~~~~VLCKI~~k~~~  182 (258)
                        ...++|||||||+|...
T Consensus       150 ~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A          150 GSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             -----CCEEEEEEEECC--
T ss_pred             CcccCCCEEEEEEEEcCCC
Confidence              24579999999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	258
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	6e-39

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  131 bits (330), Expect = 6e-39
 Identities = 45/165 (27%), Positives = 67/165 (40%), Gaps = 21/165 (12%)

Query: 20  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 79
           LP G +F PTD+EL+     +  A     +    + I     E  +    P  LP  +  
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAG----YDFSLQLIA----EIDLYKFDPWVLPNKALF 68

Query: 80  GLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVL 138
           G    +F  P  + Y  G+R  R            W  TG  + +   G+  G KK LV 
Sbjct: 69  GEKEWYFFSPRDRKYPNGSRPNRVAG------SGYWKATGTDKIISTEGQRVGIKKALVF 122

Query: 139 YTNYGKQKKPEKTNWVMHQYHLGGNEEE----KDGELVVSKVFYQ 179
           Y   GK  K  KTNW+MH+Y L          K  + V+ +++ +
Sbjct: 123 Y--IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	258
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-47  Score=324.34  Aligned_cols=154  Identities=29%  Similarity=0.469  Sum_probs=123.5

Q ss_pred             hhhcccCCCCCCCceeeCCChHHHHHH-HHHHHhcCcCCCCCcccccccccccccCcCCCCCCCCCccccC-CceEEEEe
Q 025053           10 FKARIHDLPGLPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD-GLIRHFFH   87 (258)
Q Consensus        10 ~~~~~~~~~~LPpGfRF~PTDeELI~y-L~~Kv~g~~~~~~Pl~~~~I~~vd~e~DVY~~~PweLp~~~~~-g~~~yFF~   87 (258)
                      +|++....++|||||||+|||||||.| |++|+.|     .|++.++|+++    |||++|||+||+.+.. +++||||+
T Consensus         7 ~~~~~~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g-----~~l~~~~I~~~----Dvy~~~Pw~Lp~~~~~~~~~wyFft   77 (166)
T d1ut7a_           7 QETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAG-----YDFSLQLIAEI----DLYKFDPWVLPNKALFGEKEWYFFS   77 (166)
T ss_dssp             C----CCSSCCCTTEEECCCHHHHHHHTHHHHHTT-----CCCSSCCSEEC----CGGGSCGGGHHHHSSSCSSEEEEEE
T ss_pred             cccCccccccCCCccccCCCcHHHHHHHHHHHHcC-----CCCCcccceec----cCCcCChhhccchhccCcceEEEEe
Confidence            566777888999999999999999975 9999998     46777788754    7999999999987653 44789999


Q ss_pred             cCCCCCCCCCcccccccccCCCCCceEeecCCCceEEeCCeEEEEEEEEEEEeecCCCCCCCccceEEEEEeeCCCCC--
Q 025053           88 RPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEE--  165 (258)
Q Consensus        88 ~~~kk~~~G~R~~R~~~~~~~gg~G~Wk~~G~~k~I~~~G~vvG~Kk~l~Fy~~~g~~~~g~kT~WvMhEY~L~~~~~--  165 (258)
                      ++.+++++|.|.+|++      |+|+||++|+++.|.++|.+||+|++|+||.  ++++++.+|+|+||||+|.+...  
T Consensus        78 ~~~~k~~~g~r~~R~~------g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~--~~~~~~~~t~W~M~EY~l~~~~~~~  149 (166)
T d1ut7a_          78 PRDRKYPNGSRPNRVA------GSGYWKATGTDKIISTEGQRVGIKKALVFYI--GKAPKGTKTNWIMHEYRLIEPSRRN  149 (166)
T ss_dssp             ECCC-------CCEEE------TTEEEEEEEEEEEEEETTEEEEEEEEEEEEE--SSTTSCEEEEEEEEEEEECCCC---
T ss_pred             eeccccCCCCcccccc------CCCEecccCCCceEecCCcEEEEEEEEEEEe--cCCCCCCccCeEEEEEecCCccccc
Confidence            9888999999999987      3699999999999999999999999999999  88899999999999999988653  


Q ss_pred             --CCCCCEEEEEEEEeC
Q 025053          166 --EKDGELVVSKVFYQT  180 (258)
Q Consensus       166 --~~~~~~VLCKI~~k~  180 (258)
                        ...++|||||||+|.
T Consensus       150 ~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         150 GSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             -----CCEEEEEEEECC
T ss_pred             CccccCCEEEEEEEecC
Confidence              235689999999884