Citrus Sinensis ID: 025054

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MLYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVEEYLDQFV
Secondary Structure (PSIPRED)
cccccccEEEEEccccHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHcccccEEEEcccccccccccccccccccHHHHHHHHHHHHHcccccEEEEcccccccccccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHccccccccEEEEEcccccccHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHcccHHHHHHHHHHHHHEEcccccccccccccccccccccccccccHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cHHHcccEEEEEccccHHHHHHHHHHccEEEEEccHHHHHHHHHHHHHHHHHccccEccccHcccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEHHHHHHcccccccccccccccccEEEEEEcccEEEEEEcHccHEEEEEEEccccccccEEEEEccccccccHHHHHHHHHHHHcccccEEEccHHHHHHHHHcccccccEEEEEEEEEEEEccEEEEEEccccccEEHEccccccEccHHHHHHHcc
Coil and Loop (DISEMBL)
MLYMINCLiaqgdlhdheslvkaikpVDVVISAVGRTEVEDQFKLIAAIKEVgnikrffpteygsnvdaghpiepaksgyARKAKIRRAIEaegiphtyvscncsfgfflptmaqpgatapprenilfygdgqpkaifnkeediatytikavddprtlnktlylrppkniysFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFmkgeqtnfeidpssgveaselypdvdyATVEEYLDQFV
Flexible Loop (DISEMBL)
MLYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIkevgnikrFFPTeygsnvdaghpiepaksgYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYtikavddprtlnktlylrppkniySFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVEEYLDQFV
Low Complexity Region (SEG)
MLYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYarkakirraieaeGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVEEYLDQFV
Disordered region (IsUnstruct)
*LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPI*****GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEI*********ELYPDVDYATVEEYL****
Disordered Region (DISOPRED)
MLYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVEEYLDQFV
Disordered Region (DISEMBL)
MLYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVEEYLDQFV
Disordered Region (DISPRO)
MLYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVEEYLDQFV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVEEYLDQFV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	258	2.2.26 [Sep-21-2011]
E1U332	308	Isoflavone reductase-like	N/A	no	0.968	0.811	0.664	3e-95
P52578	308	Isoflavone reductase homo	N/A	no	0.961	0.805	0.596	8e-85
P52577	310	Isoflavone reductase homo	no	no	0.976	0.812	0.572	4e-82
P52579	310	Isoflavone reductase homo	N/A	no	0.957	0.796	0.582	7e-82
P52575	318	Isoflavone reductase OS=M	N/A	no	0.980	0.795	0.5	6e-72
P52580	309	Isoflavone reductase homo	N/A	no	0.980	0.818	0.509	7e-71
P52576	318	Isoflavone reductase OS=P	N/A	no	0.968	0.786	0.498	2e-70
Q00016	318	Isoflavone reductase OS=C	N/A	no	0.968	0.786	0.490	2e-68
P52581	312	Isoflavone reductase homo	N/A	no	0.976	0.807	0.436	4e-58
Q15GI3	323	Isoeugenol synthase 1 OS=	N/A	no	0.957	0.764	0.416	7e-52

>sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1

 Score =  347 bits (891), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 166/250 (66%), Positives = 204/250 (81%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
           I  GDL+DHESLVKAIK VDVVIS VG+ ++ DQ K+IAAIKE GN+KRFFP+++G++VD
Sbjct: 59  ILTGDLYDHESLVKAIKQVDVVISTVGQLQLADQVKIIAAIKEAGNVKRFFPSDFGTDVD 118

Query: 69  AGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128
             H +EPAKS +  K++IRRAIEAEGIP+T+VS N   G+ LPT+ QP  TAPPR+ ++ 
Sbjct: 119 RCHAVEPAKSSFEIKSQIRRAIEAEGIPYTFVSANYFAGYSLPTLVQPEVTAPPRDKVII 178

Query: 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188
            GDG  KA+FN+E DI TYTIKAVDD RTLNK LY++PPKNIYSF ELVALWEKKIGKTL
Sbjct: 179 LGDGNAKAVFNEENDIGTYTIKAVDDARTLNKILYIKPPKNIYSFNELVALWEKKIGKTL 238

Query: 189 EKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYA 248
           EKIYV E+Q+L+ IQ++     I++ +N S F+KG+ TNF+I+PS GVEASELYPDV Y 
Sbjct: 239 EKIYVPEEQVLKQIQESPFPINIVMAINHSAFVKGDLTNFKIEPSFGVEASELYPDVKYT 298

Query: 249 TVEEYLDQFV 258
           TVEEYLDQFV
Sbjct: 299 TVEEYLDQFV 308

Olea europaea (taxid: 4146)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1

 Score =  313 bits (802), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 148/248 (59%), Positives = 189/248 (76%)

Query: 11  QGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAG 70
            GDL+DHESLVKAIK VDVVIS VG   + DQ KLIAAIKE GN+KRFFP+E+G++VD  
Sbjct: 61  HGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRV 120

Query: 71  HPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG 130
           H +EPAK+ +  KA+IRR +EAEGIP TYV+     G+ LP +AQPGA  PP + ++  G
Sbjct: 121 HAVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILG 180

Query: 131 DGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEK 190
            G  KA+FNKEEDI TYTI AVDDP+TLNK LY++PP NI +  ELV+LWEKK GK LE+
Sbjct: 181 HGNTKAVFNKEEDIGTYTINAVDDPKTLNKILYIKPPHNIITLNELVSLWEKKTGKNLER 240

Query: 191 IYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATV 250
           +YV E+Q+L+ IQ+AS    + L +  + F+KG+ TNFEI+PS GVEASE+YPDV Y  +
Sbjct: 241 LYVPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDVKYTPI 300

Query: 251 EEYLDQFV 258
           +E L+Q+V
Sbjct: 301 DEILNQYV 308

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1

 Score =  304 bits (779), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 146/255 (57%), Positives = 188/255 (73%), Gaps = 3/255 (1%)

Query: 5   INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           +   I  GDL+DHESLVKAIK VDVVIS VG  ++ DQ K+I+AIKE GN+KRF P+E+G
Sbjct: 56  LGVTILHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFG 115

Query: 65  SNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQ--PGATAPP 122
            +VD    +EPAKS +A K +IRR IEAEGIP+TY    C  G++LPT+ Q  PG T+PP
Sbjct: 116 VDVDRTSAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPP 175

Query: 123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEK 182
           R+ +   GDG  KA+ NKEEDIA YTIKAVDDPRTLNK LY++P  N  S  E+V LWEK
Sbjct: 176 RDKVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEK 235

Query: 183 KIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELY 242
           KIGK+LEK ++ E+Q+L+ IQ++     ++L +N ++F+ G+ TN  I+PS GVEASELY
Sbjct: 236 KIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGD-TNISIEPSFGVEASELY 294

Query: 243 PDVDYATVEEYLDQF 257
           PDV Y +V+EYL  F
Sbjct: 295 PDVKYTSVDEYLSYF 309

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1

 Score =  303 bits (776), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 144/247 (58%), Positives = 185/247 (74%)

Query: 12  GDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGH 71
           GD+ + ESL+KAIK VDVVIS VG  +  DQ  +I AIKE GNIKRF P+E+G +VD   
Sbjct: 64  GDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHAR 123

Query: 72  PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD 131
            IEPA S +A K +IRR IEAEGIP+TYV CN    FFLP + Q  A  PPR+ ++ +GD
Sbjct: 124 AIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGD 183

Query: 132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191
           G PKAI+ KEEDIATYTI+AVDDPRTLNKTL++RPP NI SF E+V+LWE KIGKTLEK+
Sbjct: 184 GNPKAIYVKEEDIATYTIEAVDDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGKTLEKL 243

Query: 192 YVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVE 251
           Y++E+ ILQ++Q+     +  L +  S+F+ G+  NFE+ P +GVEA+ELYP V Y TV+
Sbjct: 244 YLSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPKVKYTTVD 303

Query: 252 EYLDQFV 258
           E+ ++FV
Sbjct: 304 EFYNKFV 310

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52575|IFR_MEDSA Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1

 Score =  270 bits (691), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 127/254 (50%), Positives = 181/254 (71%), Gaps = 1/254 (0%)

Query: 5   INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           +  ++ +GD++DHE+LVKAIK VD+VI A GR  +EDQ K+I AIKE GN+K+FFP+E+G
Sbjct: 66  LGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFG 125

Query: 65  SNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124
            +VD    +EP +  +  KA IRR IEAEG+P+TY+ C+   G+FL  +AQ   T PPR+
Sbjct: 126 LDVDRHEAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRD 185

Query: 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
            ++  GDG  K  +  E D+ T+TI+A +DP TLNK +++R P+N  +  E++ALWEKKI
Sbjct: 186 KVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPENYLTQNEVIALWEKKI 245

Query: 185 GKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPD 244
           GKTLEK YV+E+Q+L+ IQ++S     +L +  S  +KG+   +EIDP+  +EASE YPD
Sbjct: 246 GKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAV-YEIDPAKDIEASEAYPD 304

Query: 245 VDYATVEEYLDQFV 258
           V Y T +EYL+QFV
Sbjct: 305 VTYTTADEYLNQFV 318

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (-)-medicarpin, the major phytoalexin in Alfalfa.

Medicago sativa (taxid: 3879)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1

 Score =  266 bits (681), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 129/253 (50%), Positives = 171/253 (67%)

Query: 6   NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGS 65
              + +GDL+D  SLV A+K  DVVIS +G  ++ DQ +L+ AIKE GN+KRFFP+E+G 
Sbjct: 57  GVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGL 116

Query: 66  NVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125
           +VD    +EPAKS    K  IRRA EA GIP+TY       GF LP + Q  A  PP + 
Sbjct: 117 DVDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADK 176

Query: 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG 185
            +  GDG  KA+F +E DIATYT+ A DDPR  NK LY++PP N  S  EL++LWEKK G
Sbjct: 177 AVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTG 236

Query: 186 KTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDV 245
           KT  + YV E+ +L+ IQ++     I+L +  + F++GEQT FEIDP+ GV+ASELYPDV
Sbjct: 237 KTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDV 296

Query: 246 DYATVEEYLDQFV 258
            Y TV+EYL++F+
Sbjct: 297 KYTTVDEYLNRFL 309

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52576|IFR_PEA Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1

 Score =  265 bits (677), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 125/251 (49%), Positives = 176/251 (70%), Gaps = 1/251 (0%)

Query: 8   LIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNV 67
           ++ +GD++DHE+LV AIK VD VI A GR  +EDQ K+I AIKE GN+KRFFP+E+G +V
Sbjct: 69  ILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDV 128

Query: 68  DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127
           D    +EP +  +  KA IRR +E+EG+P+TY+ C+   G+FL  +AQ  AT PPR+ ++
Sbjct: 129 DRHDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDKVV 188

Query: 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT 187
             GDG  +  +  E D+ TYTI+A +DP TLNK +++R P N  +  E++ALWEKKIGKT
Sbjct: 189 ILGDGNVRGAYVTEADVGTYTIRAANDPNTLNKAVHIRLPNNYLTANEVIALWEKKIGKT 248

Query: 188 LEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDY 247
           LEK YV+E+Q+L+ IQ +S     +L +  S  +KG+   +EIDP+  VEA + YPDV Y
Sbjct: 249 LEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKGDAV-YEIDPAKDVEAYDAYPDVKY 307

Query: 248 ATVEEYLDQFV 258
            T +EYL+QFV
Sbjct: 308 TTADEYLNQFV 318

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product (sophrol) is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (+)-pisatin, the major phytoalexin in pea.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|Q00016|IFR_CICAR Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1

 Score =  258 bits (660), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 123/251 (49%), Positives = 175/251 (69%), Gaps = 1/251 (0%)

Query: 8   LIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNV 67
           ++ +GD++DHE+LVKAIK VD VI   GR  + DQ K+I AIKE GN+KRFFP+E+G +V
Sbjct: 69  ILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDV 128

Query: 68  DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127
           D    ++P +  +  KA IRR +EAEG+P+TY+ C+   G+FL  +AQ  AT PPR+ ++
Sbjct: 129 DRHDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFDATEPPRDKVI 188

Query: 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT 187
             GDG  K  +  E D+ TYTI+A +DPRTLNK +++R P N  +  E+V+LWEKKIGKT
Sbjct: 189 ILGDGNVKGAYVTEADVGTYTIRAANDPRTLNKAVHIRLPHNYLTSNEVVSLWEKKIGKT 248

Query: 188 LEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDY 247
           LEK Y++E+++L+ I  ++     +L +  S  +KG+   +EIDP+   EA +LYPDV Y
Sbjct: 249 LEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKGDAV-YEIDPAKDAEAYDLYPDVKY 307

Query: 248 ATVEEYLDQFV 258
            T +EYLDQFV
Sbjct: 308 TTADEYLDQFV 318

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins.

Cicer arietinum (taxid: 3827)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|P52581|IFRH_LUPAL Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1

 Score =  224 bits (572), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 113/259 (43%), Positives = 161/259 (62%), Gaps = 7/259 (2%)

Query: 6   NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVED-----QFKLIAAIKEVGNIKRFFP 60
             ++ +    DH+SLV A+K VDVVI  +            Q KL+ AIK+ GNIKRF P
Sbjct: 55  GAILVEASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLTQLKLVEAIKDAGNIKRFLP 114

Query: 61  TEYGSN-VDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGAT 119
           +E+G +    GH +EP +  +  K  +R+AIE   IP TY+S NC  G+F   ++Q    
Sbjct: 115 SEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTL 174

Query: 120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVAL 179
            PPR+ +L YGDG  K ++  E+D+ATYTIK +DDPRTLNKT+YLRPP+NI + KEL+  
Sbjct: 175 LPPRDKVLLYGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTHKELIEK 234

Query: 180 WEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEAS 239
           WE+ IGK LEK  ++E   L  ++      ++ +   + IF +G  TNFEI   +G EAS
Sbjct: 235 WEELIGKQLEKNSISEKDFLSTLKGLDFASQVGVGHFYHIFYEGCLTNFEIG-ENGEEAS 293

Query: 240 ELYPDVDYATVEEYLDQFV 258
           ELYP+V+Y  +++YL  +V
Sbjct: 294 ELYPEVNYTRMDQYLKVYV 312

Lupinus albus (taxid: 3870)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1

 Score =  204 bits (518), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 104/250 (41%), Positives = 153/250 (61%), Gaps = 3/250 (1%)

Query: 5   INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           +   I  G+L +H+ LV   K VD+VIS +   +  +Q K+I AIKE GNIKRF P+E+G
Sbjct: 57  LGVTIFYGELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFG 116

Query: 65  SNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124
           + VD    +   ++    K KIRRA EA GIP T+VS N    +F+  +  P   +   E
Sbjct: 117 NEVDRVRALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKS---E 173

Query: 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
            +  YG G  KA+ N EED+A YTIKA DDPR  N+ L ++PPKNI S  +LV+ WEK  
Sbjct: 174 QVTIYGSGDAKAVLNYEEDVAAYTIKAADDPRAANRVLIIKPPKNIVSQLDLVSSWEKTT 233

Query: 185 GKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPD 244
           G TL+  +++E +I+++ +  +  + I   +  +IF+ G Q +FE+     +EASELYP+
Sbjct: 234 GSTLKMTHISEQEIIKLSESINFPENIHASILHNIFIAGAQLSFELTQDHDLEASELYPN 293

Query: 245 VDYATVEEYL 254
            +Y +V+EYL
Sbjct: 294 YNYTSVDEYL 303

Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
76559896	308	TPA: isoflavone reductase-like protein 6	0.957	0.801	0.684	6e-98
225428438	308	PREDICTED: isoflavone reductase homolog	0.957	0.801	0.688	1e-97
76559894	306	TPA: isoflavone reductase-like protein 5	0.957	0.807	0.676	1e-97
225428442	308	PREDICTED: isoflavone reductase homolog	0.957	0.801	0.680	2e-97
225428436	306	PREDICTED: isoflavone reductase homolog	0.957	0.807	0.672	3e-97
149349524	309	eugenol synthase 2 [Clarkia breweri]	0.957	0.799	0.709	7e-97
356518030	388	PREDICTED: isoflavone reductase homolog	0.965	0.641	0.681	8e-96
213385143	308	phenylcoumaran benzylic ether reductase	0.984	0.824	0.661	2e-95
255637531	310	unknown [Glycine max]	0.965	0.803	0.673	1e-94
10764491	308	allergenic isoflavone reductase-like pro	0.984	0.824	0.645	2e-94

>gi|76559896|tpe|CAI56335.1| TPA: isoflavone reductase-like protein 6 [Vitis vinifera]

 Score =  362 bits (930), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 169/247 (68%), Positives = 207/247 (83%)

Query: 12  GDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGH 71
           GDL+DHESLVKAIK VDVVIS VGR ++ DQ K+IAAIKE GN+KRFFP+E+G++VD  H
Sbjct: 62  GDLYDHESLVKAIKQVDVVISTVGRAQLSDQVKIIAAIKEAGNVKRFFPSEFGNDVDRVH 121

Query: 72  PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD 131
            + PAK+ +  KA+IRR IEAEGIP+TYVS N   GFFLPT++QPGATAPPR+ ++  GD
Sbjct: 122 AVGPAKTAFEIKAQIRRTIEAEGIPYTYVSSNFFAGFFLPTLSQPGATAPPRDKVIILGD 181

Query: 132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191
           G PKA+FNKE+DI TYTIKA DDPR LNK LY+RPP+N YSF E+V+LWEKKIGKTLEKI
Sbjct: 182 GNPKAVFNKEDDIGTYTIKAADDPRALNKILYIRPPQNTYSFNEIVSLWEKKIGKTLEKI 241

Query: 192 YVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVE 251
           YV E+Q+L+ IQ+AS    ++L ++ S+F+KG+ TNFEI+PS GVEASELYPDV Y TV+
Sbjct: 242 YVPEEQVLKNIQEASFPLNVILSISHSVFIKGDHTNFEIEPSFGVEASELYPDVKYTTVD 301

Query: 252 EYLDQFV 258
           EYLDQFV
Sbjct: 302 EYLDQFV 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428438|ref|XP_002284006.1| PREDICTED: isoflavone reductase homolog [Vitis vinifera] gi|297744402|emb|CBI37664.3| unnamed protein product [Vitis vinifera]

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 170/247 (68%), Positives = 204/247 (82%)

Query: 12  GDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGH 71
           GDL+DHESLVKAI  VDVVIS VGR ++ DQ K+IAAIKE GN+KRFFP+E+G++VD  H
Sbjct: 62  GDLYDHESLVKAINLVDVVISTVGRAQLSDQVKIIAAIKEAGNVKRFFPSEFGNDVDRVH 121

Query: 72  PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD 131
            +EPAK+ +  KA+IRR IEAEGIP+TYVS N   GFFLPT +QPGATAPPR+ ++  GD
Sbjct: 122 AVEPAKTAFEIKAQIRRTIEAEGIPYTYVSSNTFAGFFLPTFSQPGATAPPRDKVIILGD 181

Query: 132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191
           G PKA+FNKE+DI TYTIKA DDPRTLNK LY+RPP+N YSF E+V+LWEKKIGKTLEKI
Sbjct: 182 GNPKAVFNKEDDIGTYTIKAADDPRTLNKILYIRPPQNTYSFNEIVSLWEKKIGKTLEKI 241

Query: 192 YVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVE 251
           YV E+Q+L+ IQ+AS    +ML    S+F+KG+ TNFEI PS GVEASELYPDV Y TV+
Sbjct: 242 YVPEEQVLKNIQEASVPLNVMLAFCHSVFVKGDHTNFEIKPSFGVEASELYPDVKYTTVD 301

Query: 252 EYLDQFV 258
           EYL+QFV
Sbjct: 302 EYLNQFV 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76559894|tpe|CAI56334.1| TPA: isoflavone reductase-like protein 5 [Vitis vinifera]

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 167/247 (67%), Positives = 209/247 (84%)

Query: 12  GDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGH 71
           GDL+DHESLVKAIK VDVVIS VG  ++ DQ K+IAAIKE GN+KRFFP+E+G++VD  H
Sbjct: 60  GDLYDHESLVKAIKQVDVVISTVGHAQLPDQVKIIAAIKEAGNVKRFFPSEFGNDVDRVH 119

Query: 72  PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD 131
            +EPAK+ +A KA+IRR IEAEGIP+TYVS N   G+FLP+++QPGAT PPR+ ++  GD
Sbjct: 120 AVEPAKTAFATKAQIRRTIEAEGIPYTYVSSNFFAGYFLPSLSQPGATTPPRDKVIILGD 179

Query: 132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191
           G PKA+FNKE+DI TYTIKAVDDPRTLNK LY+RPP+N YSF +LV+LWEKKIGKTLEKI
Sbjct: 180 GNPKAVFNKEDDIGTYTIKAVDDPRTLNKILYIRPPQNTYSFNDLVSLWEKKIGKTLEKI 239

Query: 192 YVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVE 251
           YV E+Q+L+ IQ+AS    ++L ++ S+F+KG+ TNFEI+PS GVEA+ELYPDV Y TV+
Sbjct: 240 YVPEEQVLKNIQEASVPLNVILSISHSVFIKGDHTNFEIEPSFGVEATELYPDVKYTTVD 299

Query: 252 EYLDQFV 258
           EYL+QFV
Sbjct: 300 EYLNQFV 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428442|ref|XP_002283978.1| PREDICTED: isoflavone reductase homolog [Vitis vinifera] gi|297744400|emb|CBI37662.3| unnamed protein product [Vitis vinifera]

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 168/247 (68%), Positives = 206/247 (83%)

Query: 12  GDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGH 71
           GDL+DHESLVKAIK VDVVIS VGR ++ DQ K+IAAIKE GN+KRFFP+E+G++VD  H
Sbjct: 62  GDLYDHESLVKAIKQVDVVISTVGRAQLSDQVKIIAAIKEAGNVKRFFPSEFGNDVDRVH 121

Query: 72  PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD 131
            + PAK+ +  KA+IRR IEAEGIP+TYVS N   GFFLPT++QPGATAPPR+ ++  GD
Sbjct: 122 AVGPAKTAFEIKAQIRRTIEAEGIPYTYVSSNFFAGFFLPTLSQPGATAPPRDKVIILGD 181

Query: 132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191
           G PKA+FNKE+DI TYTIKA DDPR LNK LY+RPP+N YSF E+++LWEKKIGKTLEKI
Sbjct: 182 GNPKAVFNKEDDIGTYTIKAADDPRALNKILYIRPPQNTYSFNEILSLWEKKIGKTLEKI 241

Query: 192 YVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVE 251
           YV E+Q+L+ IQ+AS    ++L ++ S+F+KG+ TNFEI PS GVEASELYPDV Y TV+
Sbjct: 242 YVPEEQVLKNIQEASFPLNVILSISHSVFIKGDHTNFEIKPSFGVEASELYPDVKYTTVD 301

Query: 252 EYLDQFV 258
           EYLDQFV
Sbjct: 302 EYLDQFV 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428436|ref|XP_002283953.1| PREDICTED: isoflavone reductase homolog [Vitis vinifera] gi|297744403|emb|CBI37665.3| unnamed protein product [Vitis vinifera]

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 166/247 (67%), Positives = 208/247 (84%)

Query: 12  GDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGH 71
           GDL+DHESLVKAIK VDVVIS VG  ++ DQ K+IAAIKE GN+KRFFP+E+G++VD  H
Sbjct: 60  GDLYDHESLVKAIKQVDVVISTVGHAQLPDQVKIIAAIKEAGNVKRFFPSEFGNDVDRVH 119

Query: 72  PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD 131
            +EPAK+ +A KA+IRR IEAEGIP+TYVS N   G+FLP+++QPGAT PPR+ ++  GD
Sbjct: 120 AVEPAKTAFATKAQIRRTIEAEGIPYTYVSSNFFAGYFLPSLSQPGATTPPRDKVIILGD 179

Query: 132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191
           G PKA+FNKE+DI TYTIKAV+DPRTLNK LY+RPP+N YSF +LV+LWEKKIGKTLEKI
Sbjct: 180 GNPKAVFNKEDDIGTYTIKAVNDPRTLNKILYIRPPQNTYSFNDLVSLWEKKIGKTLEKI 239

Query: 192 YVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVE 251
           YV E+Q+L+ IQ+AS    ++L ++ S+F+KG+ TNFEI PS GVEA+ELYPDV Y TV+
Sbjct: 240 YVPEEQVLKNIQEASVPLNVILSISHSVFIKGDHTNFEIQPSFGVEATELYPDVKYTTVD 299

Query: 252 EYLDQFV 258
           EYL+QFV
Sbjct: 300 EYLNQFV 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|149349524|gb|ABR24114.1| eugenol synthase 2 [Clarkia breweri]

 Score =  359 bits (921), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 176/248 (70%), Positives = 206/248 (83%), Gaps = 1/248 (0%)

Query: 12  GDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGH 71
           GDL+DH+SLVKAIK VDVVIS VG  ++ DQ K+IAAIKE GN+KRFFP+E+G++VD  +
Sbjct: 62  GDLYDHDSLVKAIKQVDVVISTVGFMQIADQTKIIAAIKEAGNVKRFFPSEFGNDVDHVN 121

Query: 72  PIEPAKS-GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG 130
            +EPAKS  +A KA IRRA+EAEGIP+TYV+ NC  G+FLPT+ QPGAT PPR+ ++  G
Sbjct: 122 AVEPAKSVAFAVKANIRRAVEAEGIPYTYVASNCFNGYFLPTLVQPGATTPPRDKVIIPG 181

Query: 131 DGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEK 190
           DG PKAIFNKEEDI TYTIKAVDDPRTLNK LYLRP  NIYSF ELVALWEKKIGKTLEK
Sbjct: 182 DGNPKAIFNKEEDIGTYTIKAVDDPRTLNKILYLRPSNNIYSFNELVALWEKKIGKTLEK 241

Query: 191 IYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATV 250
           IYV E+QIL+ IQ+A     I L +N S+F+KG+ TNFEI+PS GVEASELYP+V Y TV
Sbjct: 242 IYVPEEQILKDIQEAPIPINIFLGINHSVFVKGDHTNFEIEPSFGVEASELYPEVKYTTV 301

Query: 251 EEYLDQFV 258
           EEYLDQFV
Sbjct: 302 EEYLDQFV 309

Source: Clarkia breweri

Species: Clarkia breweri

Genus: Clarkia

Family: Onagraceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518030|ref|XP_003527687.1| PREDICTED: isoflavone reductase homolog [Glycine max]

 Score =  355 bits (912), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 171/251 (68%), Positives = 208/251 (82%), Gaps = 2/251 (0%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
           + +GDL+DHE LVKAIK VDVVIS +G  ++ DQ K+IAAIKE GN+KRFFP+E+G++VD
Sbjct: 59  LVRGDLYDHEKLVKAIKQVDVVISTLGHLQLADQLKIIAAIKEAGNVKRFFPSEFGNDVD 118

Query: 69  AGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPP--RENI 126
             H +EPAKS  A KA+IRR+IEAEGIP+TYVS N   G+FLPT+AQPGA APP  ++ +
Sbjct: 119 RVHAVEPAKSALAIKAQIRRSIEAEGIPYTYVSSNYFAGYFLPTLAQPGAFAPPPPKDKV 178

Query: 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186
           +  GDG PKAIFNKEEDI TYTI+AVDDPRTLNK LYLRPPKNIYSF ELVALWE KIGK
Sbjct: 179 IILGDGNPKAIFNKEEDIGTYTIRAVDDPRTLNKILYLRPPKNIYSFNELVALWENKIGK 238

Query: 187 TLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVD 246
           TLEKIYV E+++L+ I++A     ++L +N S+F+KG+ TNFEI+PS GVEASELYPDV+
Sbjct: 239 TLEKIYVPEEKVLKDIEEAPLPINVVLAINHSVFVKGDHTNFEIEPSFGVEASELYPDVN 298

Query: 247 YATVEEYLDQF 257
           Y TVEEYL QF
Sbjct: 299 YTTVEEYLGQF 309

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|213385143|dbj|BAG84267.1| phenylcoumaran benzylic ether reductase [Nicotiana tabacum]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/254 (66%), Positives = 204/254 (80%)

Query: 5   INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           +   I  GDL+DHESLVKAIK VDVVIS +G  ++ DQ KLIAAIKE GNIKRFFP+E+G
Sbjct: 55  LGVTILHGDLYDHESLVKAIKQVDVVISTMGMMQLGDQVKLIAAIKEAGNIKRFFPSEFG 114

Query: 65  SNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124
            +VD  + +EPAKS +A K +IRRAIEAEGIP+TYVSCNC  G+FLPTM QPGAT PPR+
Sbjct: 115 MDVDKTNAVEPAKSAFAVKVQIRRAIEAEGIPYTYVSCNCFAGYFLPTMVQPGATVPPRD 174

Query: 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
            ++  GDG  KA+FN+E DI TYTIKAVDDPRTLNKTLY++PPKN  SF ELVA+WEK I
Sbjct: 175 KVIIPGDGNVKAVFNEEHDIGTYTIKAVDDPRTLNKTLYIKPPKNTLSFNELVAMWEKMI 234

Query: 185 GKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPD 244
           GKTLEKIY+ E+QIL+ I+ +     ++L +N + F+KG+QTNF+I+PS GVEASELYPD
Sbjct: 235 GKTLEKIYIPEEQILKDIETSPMPLPVILAINHATFVKGDQTNFKIEPSFGVEASELYPD 294

Query: 245 VDYATVEEYLDQFV 258
           V Y TVE+YL  FV
Sbjct: 295 VKYTTVEDYLGHFV 308

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637531|gb|ACU19092.1| unknown [Glycine max]

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 169/251 (67%), Positives = 206/251 (82%), Gaps = 2/251 (0%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
           + +GDL+DHE LVKAIK VDVVIS +G  ++ DQ K+IAAIKE GN+KRFFP+E+G++VD
Sbjct: 59  LVRGDLYDHEKLVKAIKQVDVVISTLGHLQLADQLKIIAAIKEAGNVKRFFPSEFGNDVD 118

Query: 69  AGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPP--RENI 126
             H +EPAKS  A KA+IRR+IEAEGIP+TYVS N   G+FLPT+AQPGA APP  ++ +
Sbjct: 119 RVHAVEPAKSALAIKAQIRRSIEAEGIPYTYVSSNYFAGYFLPTLAQPGAFAPPPPKDKV 178

Query: 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186
           +  GDG PKAIFNKEEDI TYTI+AVDDPRTLNK LYLRPPKNIYSF ELVALWE KIGK
Sbjct: 179 IILGDGNPKAIFNKEEDIGTYTIRAVDDPRTLNKILYLRPPKNIYSFNELVALWENKIGK 238

Query: 187 TLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVD 246
           TLEKIYV E+++ + I++A     ++L +N S+F+KG+ TNFEI+PS GVEA ELYPDV+
Sbjct: 239 TLEKIYVPEEKVFKDIEEAPLPINVVLAINHSVFVKGDHTNFEIEPSFGVEAFELYPDVN 298

Query: 247 YATVEEYLDQF 257
           Y TVEEYL QF
Sbjct: 299 YTTVEEYLGQF 309

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10764491|gb|AAG22740.1|AF282850_1 allergenic isoflavone reductase-like protein Bet v 6.0102 [Betula pendula]

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 164/254 (64%), Positives = 206/254 (81%)

Query: 5   INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           +   +  GDL+DHESLVKA K VDVVIS VG  ++ DQ K+IAAIKE GNIKRFFP+E+G
Sbjct: 55  LGVTLLHGDLYDHESLVKAFKQVDVVISTVGHLQLADQVKIIAAIKEAGNIKRFFPSEFG 114

Query: 65  SNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124
           ++VD  H +EPAK+ +A KA+IRR  EAEGIP+TYVS N   G+FLPT+AQPG T+PPRE
Sbjct: 115 NDVDRVHAVEPAKTAFATKAEIRRKTEAEGIPYTYVSSNFFAGYFLPTLAQPGLTSPPRE 174

Query: 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
            ++ +GDG  +A+FNKE+DI TYTI+AVDDPRTLNK +Y++P KNIYSF E+VALWEKKI
Sbjct: 175 KVVIFGDGNARAVFNKEDDIGTYTIRAVDDPRTLNKIVYIKPAKNIYSFNEIVALWEKKI 234

Query: 185 GKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPD 244
           GKTLEKIYV E+++L+ IQ++     ++L +N S+F+KG+ TNFEI+ S GVEASELYPD
Sbjct: 235 GKTLEKIYVPEEKLLKDIQESPIPINVILAINHSVFVKGDHTNFEIEASFGVEASELYPD 294

Query: 245 VDYATVEEYLDQFV 258
           V Y TVEEYL QFV
Sbjct: 295 VKYTTVEEYLQQFV 308

Source: Betula pendula

Species: Betula pendula

Genus: Betula

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
TAIR|locus:2136383	308	AT4G39230 [Arabidopsis thalian	0.957	0.801	0.599	3e-78
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.965	0.783	0.549	4e-74
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.961	0.8	0.545	9.9e-71
TAIR|locus:2025167	322	AT1G75300 [Arabidopsis thalian	0.953	0.763	0.505	4.7e-64
TAIR|locus:2016482	310	AT1G19540 [Arabidopsis thalian	0.968	0.806	0.5	3.9e-60
TAIR|locus:2139494	306	AT4G34540 [Arabidopsis thalian	0.957	0.807	0.449	1.1e-55
TAIR|locus:2119455	317	PRR2 "pinoresinol reductase 2"	0.961	0.782	0.406	1.3e-45
TAIR|locus:2031730	317	PRR1 "pinoresinol reductase 1"	0.961	0.782	0.390	1.5e-44
UNIPROTKB|G4MWE1	332	MGG_08352 "Isoflavone reductas	0.891	0.692	0.224	1.1e-08
ASPGD|ASPL0000072559	359	AN8815 [Emericella nidulans (t	0.197	0.142	0.452	2.2e-07

TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)]

 Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
 Identities = 148/247 (59%), Positives = 186/247 (75%)

Query:    12 GDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGH 71
             GDL DH SLV +IK  DVVIS VG + +  Q+K+I+AIKE GN+KRFFP+E+G++VD   
Sbjct:    62 GDLDDHTSLVNSIKQADVVISTVGHSLLGHQYKIISAIKEAGNVKRFFPSEFGNDVDRVF 121

Query:    72 PIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD 131
              +EPAKS Y             GIP+TYVSCN   G+FLPT+AQPGAT+ PR+ ++  GD
Sbjct:   122 TVEPAKSAYATKAKIRRTIEAEGIPYTYVSCNFFAGYFLPTLAQPGATSAPRDKVIVLGD 181

Query:   132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191
             G PKA+FNKEEDI TYTI AVDDPRTLNK LY+RPP N YSF +LV+LWE KIGKTLE+I
Sbjct:   182 GNPKAVFNKEEDIGTYTINAVDDPRTLNKILYIRPPMNTYSFNDLVSLWENKIGKTLERI 241

Query:   192 YVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVE 251
             YV E+Q+L+ I ++S    +ML +   +F+KG  T+FEI+PS GVEASELYPDV Y TV+
Sbjct:   242 YVPEEQLLKQIIESSPPLNVMLSLCHCVFVKGGHTSFEIEPSFGVEASELYPDVKYTTVD 301

Query:   252 EYLDQFV 258
             E L+Q+V
Sbjct:   302 EILNQYV 308

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0032442 "phenylcoumaran benzylic ether reductase activity" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 138/251 (54%), Positives = 182/251 (72%)

Query:     9 IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
             +  GDL+DHESLVKAIK  DVVIS VG  ++ DQ K+I+AIKE GN+KRF P+E+G +VD
Sbjct:    60 LLHGDLNDHESLVKAIKQADVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGMDVD 119

Query:    69 AGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQ--PGATAPPRENI 126
                 +EPAKS +             GIP+TY+  N   G++LPT+ Q  PG T+PPR+ +
Sbjct:   120 KSSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTSPPRDKV 179

Query:   127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186
               +GDG  KA+ NKEEDIA YTIKAVDDPRTLNKTLY+ PP N  S  E+V LWEKKIGK
Sbjct:   180 KIFGDGNVKAVINKEEDIAAYTIKAVDDPRTLNKTLYINPPNNTLSMNEIVTLWEKKIGK 239

Query:   187 TLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVD 246
             ++EKIY++E+QI + IQ++     ++L +N ++F+KG+QTNF I+PS G EASELYPD+ 
Sbjct:   240 SVEKIYMSEEQIFKSIQESPVPFNVLLSINHAVFVKGDQTNFTIEPSFGFEASELYPDIK 299

Query:   247 YATVEEYLDQF 257
             Y +++EYL  F
Sbjct:   300 YTSIDEYLSYF 310

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
 Identities = 137/251 (54%), Positives = 177/251 (70%)

Query:     9 IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
             I  GDL+DHESLVKAIK VDVVIS VG  ++ DQ K+I+AIKE GN+KRF P+E+G +VD
Sbjct:    60 ILHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVD 119

Query:    69 AGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQ--PGATAPPRENI 126
                 +EPAKS +             GIP+TY    C  G++LPT+ Q  PG T+PPR+ +
Sbjct:   120 RTSAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKV 179

Query:   127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186
                GDG  KA+ NKEEDIA YTIKAVDDPRTLNK LY++P  N  S  E+V LWEKKIGK
Sbjct:   180 TILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGK 239

Query:   187 TLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVD 246
             +LEK ++ E+Q+L+ IQ++     ++L +N ++F+ G+ TN  I+PS GVEASELYPDV 
Sbjct:   240 SLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGD-TNISIEPSFGVEASELYPDVK 298

Query:   247 YATVEEYLDQF 257
             Y +V+EYL  F
Sbjct:   299 YTSVDEYLSYF 309

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)]

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 134/265 (50%), Positives = 174/265 (65%)

Query:     9 IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
             I  GDL+DHESLVKAIK VDVVIS +G  ++ DQ K+I+AIKE GN+KRF P E+G +V+
Sbjct:    60 ILHGDLNDHESLVKAIKQVDVVISTIGHKQIFDQTKIISAIKEAGNVKRFLPAEFGIDVE 119

Query:    69 AGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQ--PGATA------ 120
                 +EPAKS +             GIP+TYV  NCS GF+L T+ Q   G  +      
Sbjct:   120 RTSAVEPAKSLFAGKVQIRRAIEAEGIPYTYVVSNCSAGFYLRTLLQFESGLISHTRDKA 179

Query:   121 --------PPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYS 172
                     PPR+ +   GDG  K + NKEED+A Y IKAVDD RTLNKTLY+ PP NI S
Sbjct:   180 IIFGDKNVPPRDKVTILGDGNAKVVINKEEDVAAYMIKAVDDLRTLNKTLYISPPNNILS 239

Query:   173 FKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDP 232
               E+V LWEKKIGK+LEK +++E+QIL+ IQ   +   +   +N ++F+KG+QT+F I+P
Sbjct:   240 MNEMVTLWEKKIGKSLEKTHISEEQILKSIQVPID---VFKSINHAVFVKGDQTSFTIEP 296

Query:   233 SSGVEASELYPDVDYATVEEYLDQF 257
               G EAS LYPDV Y +++EYL QF
Sbjct:   297 WFGEEASVLYPDVKYTSIDEYLSQF 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 127/254 (50%), Positives = 168/254 (66%)

Query:     9 IAQGDLHDHESLVKAIKPVDVVISAVGR--TEVEDQFKLIAAIKEVGNIKRFFPTEYGSN 66
             I  G L D ESLVKAIK VDVVISAVGR  TE+ +Q  +I AIKE GN+KRF P+E+G++
Sbjct:    57 ILYGSLSDKESLVKAIKQVDVVISAVGRFQTEILNQTNIIDAIKESGNVKRFLPSEFGND 116

Query:    67 VDAGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGAT--APPRE 124
             VD    IEP  S +              IP+TYV   C  G F+P + Q      +PPR+
Sbjct:   117 VDRTVAIEPTLSEFITKAQIRRAIEAAKIPYTYVVSGCFAGLFVPCLGQCHLRLRSPPRD 176

Query:   125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
              +  Y  G  KAI N EEDI  YT+KAVDDPRTLNK LY+ PP  I S  ++V LWE+KI
Sbjct:   177 KVSIYDTGNGKAIVNTEEDIVAYTLKAVDDPRTLNKILYIHPPNYIVSQNDMVGLWEEKI 236

Query:   185 GKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPD 244
             GKTLEK YV+E+++L+ IQ++      ++ +  +I +K + T+F IDPS GVEASELYP+
Sbjct:   237 GKTLEKTYVSEEELLKTIQESKPPMDFLVGLIHTILVKSDFTSFTIDPSFGVEASELYPE 296

Query:   245 VDYATVEEYLDQFV 258
             V Y +V+E+L++F+
Sbjct:   297 VKYTSVDEFLNRFI 310

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 111/247 (44%), Positives = 151/247 (61%)

Query:     9 IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
             + +G L D  SL +A+  VDVVISA+    V DQ  L+  IK+ G+IKRF P EYG+N D
Sbjct:    57 LLKGSLEDEGSLAEAVSKVDVVISAIPSKHVLDQKLLVRVIKQAGSIKRFIPAEYGANPD 116

Query:    69 AGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128
                  +     Y             GIP+TY+ C       LP++ QPG  +PP + +  
Sbjct:   117 KTQVSDLDHDFYSKKSEIRHMIESEGIPYTYICCGLFMRVLLPSLVQPGLQSPPTDKVTV 176

Query:   129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188
             +GDG  KA+F  + D+A +TIK +DDPRTLNKTLYL PP NI S  +LV LWE KI K L
Sbjct:   177 FGDGNVKAVFVNDVDVAAFTIKTIDDPRTLNKTLYLSPPGNICSMNDLVELWEGKIEKKL 236

Query:   189 EKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYA 248
             EK + TE+Q+L+ I++    D + +V  +S+F+KG+ T F+I+   GV  +ELYPDV Y 
Sbjct:   237 EKTFATENQLLKKIKETPYPDNMEMVFIYSVFIKGDHTYFDIESCGGVNGTELYPDVKYM 296

Query:   249 TVEEYLD 255
             TV E+LD
Sbjct:   297 TVSEFLD 303

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS

TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 104/256 (40%), Positives = 146/256 (57%)

Query:     9 IAQGDLHDHESLVKAIKPVDVVISAVG----RTE-VEDQFKLIAAIKEVGNIKRFFPTEY 63
             + +G   DH+SLV A+K VDVV+SA+     RT  +  Q KL+AAIKE GN+KRF P+E+
Sbjct:    64 LVEGSFSDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFLPSEF 123

Query:    64 GSNVDA-GHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPP 122
             G +    GH + P    +             GI HTY+   C   +F   ++Q G   PP
Sbjct:   124 GMDPSRMGHAMPPGSETFDQKMEIRNAIKAAGISHTYLVGACFAAYFGGNLSQMGTLFPP 183

Query:   123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEK 182
             +  +  YGDG  K +F  E+D+A YT K ++DPRTLNKT+Y+RP  NI +  ELV +WEK
Sbjct:   184 KNKVDIYGDGNVKVVFVDEDDMAKYTAKTLNDPRTLNKTVYVRPTDNILTQMELVQIWEK 243

Query:   183 KIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELY 242
                K LEK YV+ +  L  I+D     +  L   + I+ +G  T+ E+      EA++LY
Sbjct:   244 LTEKELEKTYVSGNDFLADIEDKEISHQAGLGHFYHIYYEGCLTDHEVGDDE--EATKLY 301

Query:   243 PDVDYATVEEYLDQFV 258
             PDV Y  ++EYL  FV
Sbjct:   302 PDVKYKRMDEYLKIFV 317

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 100/256 (39%), Positives = 140/256 (54%)

Query:     9 IAQGDLHDHESLVKAIKPVDVVISAVGRTEVED-----QFKLIAAIKEVGNIKRFFPTEY 63
             I +G   DH+SLV A+K VDVV+SA+            Q KL+ AIKE GN+KRF P+E+
Sbjct:    64 IVEGSFSDHQSLVSAVKLVDVVVSAMSGVHFRSHNILVQLKLVEAIKEAGNVKRFLPSEF 123

Query:    64 GSNVDA-GHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPP 122
             G +    GH + P +  +             GIP+TYV   C   +F   ++Q     PP
Sbjct:   124 GMDPPRMGHALPPGRETFDQKMEVRQAIEAAGIPYTYVVGACFAAYFAGNLSQMVTLLPP 183

Query:   123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEK 182
             +E +  YGDG  K +F  E+DIA YT K ++DPRTLNKT+ +RPP N+ +  ELV +WEK
Sbjct:   184 KEKVNIYGDGNVKVVFADEDDIAKYTAKTLNDPRTLNKTVNIRPPDNVLTQLELVQIWEK 243

Query:   183 KIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELY 242
               GK LEK  +     L  I+      +  +   + IF +G  T+ E+      EAS LY
Sbjct:   244 LTGKELEKTNIAAQDFLANIEQMEIPHQAGIGHFYHIFYEGCLTDHEVGEDE--EASSLY 301

Query:   243 PDVDYATVEEYLDQFV 258
             PDV Y  +++YL  F+
Sbjct:   302 PDVKYKRMDDYLRMFL 317

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

UNIPROTKB|G4MWE1 MGG_08352 "Isoflavone reductase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 151 (58.2 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 58/258 (22%), Positives = 111/258 (43%)

Query:    14 LHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPI 73
             L   E LV  ++  D V++ +     E+Q  L+ A KE G +KR  P+ +        P+
Sbjct:    69 LGPREELVNVLRGADAVVAPIDFDNFEEQKALVDACKEAG-VKRLTPSNFA-------PV 120

Query:    74 EPAKS--GYXXXXXXXXXXXXXG-IPHTYVSCNC---SFGFFLPTMAQPGATAPPRENIL 127
              PA +  G                +P+T +       +  F +P+      +    ++  
Sbjct:   121 MPAYNVMGMRETKEATINYIKEQRVPYTIIDVAWWYQNLPFKIPSGRTDYMSEILNDDAR 180

Query:   128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT 187
               G G     F+    I T+  + + DPRT+NK  Y+     + +  ++V   E+  G+ 
Sbjct:   181 IIGTGDVPIAFSNLRSIGTHVARILADPRTINK--YVHIWDEVLTMHQVVETLEEVSGEK 238

Query:   188 LEKIYVTEDQI--------LQMIQDASNEDKIM-LVVN---FSIFMKGEQTNFEIDPSSG 235
             +E++Y T+  +         ++  D  ++D  M L V    +S+ ++G+ T    D    
Sbjct:   239 VERVYNTQKDMEETMAKCKAKLAADPKDQDAGMELTVTQYFYSMGVRGDSTPEVADYLGY 298

Query:   236 VEASELYPDVDYATVEEY 253
             +++  LYPD+  +T+ EY
Sbjct:   299 LDSRRLYPDIKASTLREY 316

GO:0005575 "cellular_component" evidence=ND

ASPGD|ASPL0000072559 AN8815 [Emericella nidulans (taxid:162425)]

 Score = 98 (39.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
 Identities = 24/53 (45%), Positives = 31/53 (58%)

Query:     9 IAQGDLHD-HESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60
             I + DL    E L KA+  +DVVIS VG  E +DQ  +  A K+ G +KRF P
Sbjct:    55 IRKCDLKSSEEELEKALSDIDVVISCVGSAEQQDQIPIANAAKKAG-VKRFIP 106

GO:0005622 "intracellular" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P52580	IFRH_MAIZE	1, ., 3, ., 1, ., -	0.5098	0.9806	0.8187	N/A	no
P52578	IFRH_SOLTU	1, ., 3, ., 1, ., -	0.5967	0.9612	0.8051	N/A	no
E1U332	ALL12_OLEEU	1, ., 3, ., 1, ., -	0.664	0.9689	0.8116	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.766
3rd Layer	1.3.1.45	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	258
pfam05368	232	pfam05368, NmrA, NmrA-like family	1e-72
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	1e-54
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-13
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	1e-10
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	5e-09
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	2e-07
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	8e-07
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	3e-06
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	6e-06
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	7e-04

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score =  221 bits (566), Expect = 1e-72
 Identities = 91/183 (49%), Positives = 115/183 (62%), Gaps = 6/183 (3%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVG---RTEVEDQFKLIAAIKEVGNIKRFFPTEYGS 65
           + +GDL DHESLV+A+K VDVV S  G     E+ED  KL  A KE G +K F P+E+G+
Sbjct: 47  LVEGDLDDHESLVEALKGVDVVFSVTGFWLSKEIEDGKKLADAAKEAG-VKHFIPSEFGN 105

Query: 66  NVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125
           +VD  + +EPA   +  KA++ R I A GIP+T+V      G FL  +A PG  APPR+ 
Sbjct: 106 DVDRSNGVEPAVPHFDSKAEVERYIRALGIPYTFVYAGFFMGNFLSNLAPPGDLAPPRDK 165

Query: 126 ILFYGDGQPKAIFN-KEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
           +   G G PKA+    EEDI TY IK +DDPR L K  Y+RPP NI S  E+  LW KKI
Sbjct: 166 VTLLGPGNPKAVPLDDEEDIGTYVIKILDDPRKL-KGKYIRPPGNILSGNEIAELWSKKI 224

Query: 185 GKT 187
           GKT
Sbjct: 225 GKT 227

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score =  176 bits (449), Expect = 1e-54
 Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 22/248 (8%)

Query: 12  GDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGH 71
            D   HESLV A+K VD VISA+G   + DQ KLI A    G +KRF P+E+G + D   
Sbjct: 51  VDYASHESLVAALKGVDAVISALGGAAIGDQLKLIDAAIAAG-VKRFIPSEFGVDYDRIG 109

Query: 72  PIEPAKSGYARKAKIRRAIEA--EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY 129
            +      +  K  +RR + A   G+P TYVS      + L  +               Y
Sbjct: 110 ALPLL-DLFDEKRDVRRYLRAKNAGLPWTYVSTGMFLDYLLEPLFGVV--DLANRTATIY 166

Query: 130 GDGQPKAIFNKEEDIATYTIKAVD-DPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188
           GDG+ K  F   EDI     +A+    RTLN+ +++    ++ +  EL+AL E+  G+  
Sbjct: 167 GDGETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVAG--DVVTQNELIALVERVTGRKF 224

Query: 189 EKIYVTEDQILQMIQDASNEDKIMLVVNF--SIFMKGEQTNFEIDPSSGVEASEL-YPDV 245
           E+ YV+E+++L+ + +A+    +  V+ F   + + G            VE S+  Y  +
Sbjct: 225 ERTYVSEEELLEELIEAAPAGLLNYVIAFLHGLGIGGG----------DVEKSDAEYLGL 274

Query: 246 DYATVEEY 253
              TVEE 
Sbjct: 275 KVETVEEL 282

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 66.3 bits (162), Expect = 2e-13
 Identities = 38/166 (22%), Positives = 52/166 (31%), Gaps = 48/166 (28%)

Query: 11  QGDLHDHESLVKAIKPVDVVISAVG---------RTEVEDQFKLIAAIKEVGNIKRFFPT 61
           +GDL D +SL  A++ VDVVI   G           +VE    ++ A KE G +K F   
Sbjct: 47  EGDLRDLDSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG-VKHFIFI 105

Query: 62  EYGSNVDAGHPIEP--AKSGYAR-KAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGA 118
                    H        S Y   KAK    +    +P+T V     +G           
Sbjct: 106 SSLGAYGDLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYG----------- 154

Query: 119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYL 164
                                   D+A     AV  P   N+T   
Sbjct: 155 ------------------------DLARAIANAVVTPGKKNETFNA 176

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 17/221 (7%)

Query: 9   IAQGDLHDHESLVKAIKPVDVV--ISAVGRTEVEDQFK-LIAAIKEVGNIKRFFPTEYGS 65
           + QGD  D E+L +A + VD +  IS     +   Q K  I A K+ G +K      Y S
Sbjct: 45  VRQGDYDDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDAAKQAG-VKHIV---YLS 100

Query: 66  NVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125
              A        +         + +EA GIP+T +         L     P       E 
Sbjct: 101 ASGADEDSPFLLARDHG--ATEKYLEASGIPYTILRPGWFMDNLL--EFLPSILE---EG 153

Query: 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG 185
            ++   G  K  F    DIA     A+ +P    K   L  P+   S+ EL A+  + +G
Sbjct: 154 TIYGPAGDGKVAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPE-ALSYAELAAILSEALG 212

Query: 186 KTLEKIYVTEDQILQMIQDASNEDKI--MLVVNFSIFMKGE 224
           K +  + V+ D+  + +  A   +    +L   ++   KGE
Sbjct: 213 KPVRYVPVSPDEAARELLAAGLPEGFAALLASLYAAIRKGE 253

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 49/167 (29%), Positives = 64/167 (38%), Gaps = 28/167 (16%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVG-------RTEVED---QFKLIAAIKEVGNIKRF 58
           +  GDL D ESL  A++ +D VISA G       RTE  D      LI A K+ G +KRF
Sbjct: 46  VVVGDLTDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAG-VKRF 104

Query: 59  FPTEYGS--NVDAGHPIEPAKSGYAR-KAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQ 115
                 S    D       A   Y   K K    + A G+ +T V      G        
Sbjct: 105 V---LVSSIGADKPSHPLEALGPYLDAKRKAEDYLRASGLDYTIVR---PGGLTD----D 154

Query: 116 PGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTL 162
           P  T      ++  GDG          D+A    +A+D P  + KT 
Sbjct: 155 PAGTG----RVVLGGDGTRLDGPISRADVAEVLAEALDTPAAIGKTF 197

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 7/180 (3%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKR-FFPTEYGSNV 67
           +  GDL D +SLV   K VD V+   G  +  D F+ +     V   +      ++G ++
Sbjct: 46  VVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSL 105

Query: 68  DAGHPIEPAKSGYAR-KAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126
                   + S  AR KA +  A+ + GIP+T +    +  +     A   A       +
Sbjct: 106 SVLGADAASPSALARAKAAVEAALRSSGIPYTTL--RRAAFYLGAGAAFIEAAEAAGLPV 163

Query: 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186
           +  G G+   I    +D+A     A+D P T  +T  L  P+   +  EL +  +  IG+
Sbjct: 164 IPRGIGRLSPIA--VDDVAEALAAALDAPATAGRTYELAGPE-ALTLAELASGLDYTIGR 220

Length = 275

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 47.7 bits (114), Expect = 8e-07
 Identities = 29/154 (18%), Positives = 45/154 (29%), Gaps = 25/154 (16%)

Query: 11  QGDLHDHESLVKAIKPVDVVISAVGRTEVEDQF--KLIAAIKEVGNIKRFF----PTEYG 64
           Q DL D   L +A+  VD V+ A G    +      L+ A    G ++R         Y 
Sbjct: 44  QKDLFDLADLAEALAGVDAVVDAFGARPDDSDGVKHLLDAAARAG-VRRIVVVSAAGLYR 102

Query: 65  SNVDAGHPIEPA--KSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPP 122
                    +          KA     + A G+  T V               PGA    
Sbjct: 103 DEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVR--------------PGALFDE 148

Query: 123 RENILFYGDGQPKAIFNK--EEDIATYTIKAVDD 154
                  G     A  +     D+A   +  +++
Sbjct: 149 EGETYEIGTEGDPAGESSISRADVAAALLDELEN 182

Length = 182

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 57/207 (27%), Positives = 79/207 (38%), Gaps = 38/207 (18%)

Query: 8   LIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKL----------IAAI-KEVGNIK 56
           L  + DL D ES+ KA++  DVVI+ VGR      F            +A   KE G ++
Sbjct: 50  LFVEFDLRDDESIRKALEGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAG-VE 108

Query: 57  RFFPTEYGS-NVDAGHPIEPAKSGYAR-KAKIRRAIEAEGIPHTYVSCNCSFG----FFL 110
           R       +   DA  P     S Y R KA+   A+       T V  +  FG    F  
Sbjct: 109 RL--IHISALGADANSP-----SKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDRFLN 161

Query: 111 PTMAQPGATAPPRENILFYGDG----QPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP 166
                      P       G G    QP  +     D+A    +A+ DP T  KT  L  
Sbjct: 162 RFAKLLAFLPFP----PLIGGGQTKFQPVYV----GDVAEAIARALKDPETEGKTYELVG 213

Query: 167 PKNIYSFKELVALWEKKIGKTLEKIYV 193
           PK +Y+  ELV L  +  G+    + +
Sbjct: 214 PK-VYTLAELVELLRRLGGRKRRVLPL 239

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 48/189 (25%), Positives = 71/189 (37%), Gaps = 23/189 (12%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVIS------AVGRTEVEDQFKLIAAIKEVGNIKRF-FPT 61
           + QGDL D ESL  A+K V  V        A G  E+     ++ A K  G ++ F F  
Sbjct: 48  VVQGDLDDPESLEAALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAG-VQHFVF-- 104

Query: 62  EYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFF---LPTMAQPGA 118
              S+V     +  A   +  KA++   I A G+P T +       FF     T   P  
Sbjct: 105 ---SSVPDVEKLTLAVPHFDSKAEVEEYIRASGLPATIL----RPAFFMENFLTPPAPQK 157

Query: 119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-RTLNKTLYLRPPKNIYSFKELV 177
                  ++   D   K       DI         DP +   KT+ L       + +E+ 
Sbjct: 158 MEDGTLTLVLPLDPDTKLPMIDVADIGPAVAAIFKDPAKFNGKTIELAGD--ELTPEEIA 215

Query: 178 ALWEKKIGK 186
           A + K +GK
Sbjct: 216 AAFSKVLGK 224

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 27/173 (15%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFK--------LIAAIKEVGNIKRFFP 60
           + QGD+ D E + +A++  D VISA+G                 +++A+K  G  +    
Sbjct: 45  VVQGDVLDLEDVKEALEGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVV 104

Query: 61  TEYGSNVDAGHPI---------EPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLP 111
              GS  D                 +      A++ + +   G+  T V          P
Sbjct: 105 GGAGSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVR--------PP 156

Query: 112 TMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYL 164
            +   GAT      +    D +  +  ++  D+A + +  ++ P  + K   +
Sbjct: 157 ALFDGGATG-GYYRVELLVDAKGGSRISR-ADLAIFMLDELETPEHVRKRPTI 207

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	258
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.97
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.97
CHL00194	317	ycf39 Ycf39; Provisional	99.95
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.91
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.9
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.9
PLN00016	378	RNA-binding protein; Provisional	99.86
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.85
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.85
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.82
PLN02427	386	UDP-apiose/xylose synthase	99.81
PLN02572	442	UDP-sulfoquinovose synthase	99.81
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.8
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.8
PLN02260	668	probable rhamnose biosynthetic enzyme	99.8
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.79
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.79
PLN02214	342	cinnamoyl-CoA reductase	99.77
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.76
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.76
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.76
PLN02686	367	cinnamoyl-CoA reductase	99.76
PLN02206	442	UDP-glucuronate decarboxylase	99.76
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.76
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.75
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.75
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.75
PRK07201	657	short chain dehydrogenase; Provisional	99.75
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.74
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.74
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.74
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.74
PLN02240	352	UDP-glucose 4-epimerase	99.74
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.73
PLN02996	491	fatty acyl-CoA reductase	99.73
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.72
PRK05865	854	hypothetical protein; Provisional	99.72
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.72
PLN02650	351	dihydroflavonol-4-reductase	99.72
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.72
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.71
PLN00198	338	anthocyanidin reductase; Provisional	99.71
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.71
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.7
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.69
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.68
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.67
PLN02653	340	GDP-mannose 4,6-dehydratase	99.67
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.67
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.66
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.65
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.65
PLN02583	297	cinnamoyl-CoA reductase	99.64
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.61
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.61
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.59
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.58
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.58
PLN02778	298	3,5-epimerase/4-reductase	99.55
PLN03209	576	translocon at the inner envelope of chloroplast su	99.54
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.52
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.5
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.46
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.44
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.43
PLN02503	605	fatty acyl-CoA reductase 2	99.4
PRK12320	699	hypothetical protein; Provisional	99.39
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.37
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.31
PLN02260	668	probable rhamnose biosynthetic enzyme	99.29
COG2910	211	Putative NADH-flavin reductase [General function p	99.21
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.14
PRK06482	276	short chain dehydrogenase; Provisional	99.1
PRK08263	275	short chain dehydrogenase; Provisional	99.06
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.02
PRK05875	276	short chain dehydrogenase; Provisional	98.97
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	98.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	98.95
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	98.93
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.9
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.88
PRK09291	257	short chain dehydrogenase; Provisional	98.88
PRK07074	257	short chain dehydrogenase; Provisional	98.87
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.86
PRK06182	273	short chain dehydrogenase; Validated	98.86
PRK12828	239	short chain dehydrogenase; Provisional	98.84
PRK07825	273	short chain dehydrogenase; Provisional	98.83
PRK07806	248	short chain dehydrogenase; Provisional	98.83
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	98.83
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.8
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	98.79
PRK06138	252	short chain dehydrogenase; Provisional	98.77
PRK08219	227	short chain dehydrogenase; Provisional	98.72
PRK06914	280	short chain dehydrogenase; Provisional	98.7
PRK12746	254	short chain dehydrogenase; Provisional	98.69
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.68
PRK06180	277	short chain dehydrogenase; Provisional	98.68
PRK06179	270	short chain dehydrogenase; Provisional	98.66
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.66
PRK07067	257	sorbitol dehydrogenase; Provisional	98.65
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.64
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.63
PRK12829	264	short chain dehydrogenase; Provisional	98.61
PRK08017	256	oxidoreductase; Provisional	98.61
PRK07775	274	short chain dehydrogenase; Provisional	98.6
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.58
PRK05876	275	short chain dehydrogenase; Provisional	98.58
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.56
KOG2774	366	consensus NAD dependent epimerase [General functio	98.56
PRK07060	245	short chain dehydrogenase; Provisional	98.55
PRK07523	255	gluconate 5-dehydrogenase; Provisional	98.54
PRK05650	270	short chain dehydrogenase; Provisional	98.54
PRK07326	237	short chain dehydrogenase; Provisional	98.54
PRK12935	247	acetoacetyl-CoA reductase; Provisional	98.54
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.54
PRK12827	249	short chain dehydrogenase; Provisional	98.54
PRK09135	249	pteridine reductase; Provisional	98.53
PRK06194	287	hypothetical protein; Provisional	98.53
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	98.51
PRK12939	250	short chain dehydrogenase; Provisional	98.5
PRK10538	248	malonic semialdehyde reductase; Provisional	98.5
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	98.5
PRK08324	681	short chain dehydrogenase; Validated	98.49
PRK07577	234	short chain dehydrogenase; Provisional	98.46
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.45
PRK06128	300	oxidoreductase; Provisional	98.42
PRK09186	256	flagellin modification protein A; Provisional	98.42
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.41
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	98.41
PRK12938	246	acetyacetyl-CoA reductase; Provisional	98.41
PRK07041	230	short chain dehydrogenase; Provisional	98.41
PRK06181	263	short chain dehydrogenase; Provisional	98.4
PRK12824	245	acetoacetyl-CoA reductase; Provisional	98.4
PRK08628	258	short chain dehydrogenase; Provisional	98.39
PRK07454	241	short chain dehydrogenase; Provisional	98.34
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	98.33
PRK07774	250	short chain dehydrogenase; Provisional	98.32
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.32
PRK06123	248	short chain dehydrogenase; Provisional	98.3
PRK07109	334	short chain dehydrogenase; Provisional	98.3
PRK06841	255	short chain dehydrogenase; Provisional	98.29
PRK06124	256	gluconate 5-dehydrogenase; Provisional	98.28
PRK05993	277	short chain dehydrogenase; Provisional	98.28
PRK08213	259	gluconate 5-dehydrogenase; Provisional	98.27
PRK12937	245	short chain dehydrogenase; Provisional	98.26
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	98.24
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	98.24
PRK07904	253	short chain dehydrogenase; Provisional	98.24
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.24
PRK06196	315	oxidoreductase; Provisional	98.24
PRK09134	258	short chain dehydrogenase; Provisional	98.23
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.23
PRK07890	258	short chain dehydrogenase; Provisional	98.2
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	98.19
PRK07069	251	short chain dehydrogenase; Validated	98.18
PRK07024	257	short chain dehydrogenase; Provisional	98.16
PRK07097	265	gluconate 5-dehydrogenase; Provisional	98.16
PRK08264	238	short chain dehydrogenase; Validated	98.16
PRK12743	256	oxidoreductase; Provisional	98.16
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	98.15
PRK07814	263	short chain dehydrogenase; Provisional	98.15
PLN02253	280	xanthoxin dehydrogenase	98.14
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.14
PRK06701	290	short chain dehydrogenase; Provisional	98.14
PRK08251	248	short chain dehydrogenase; Provisional	98.13
PRK08085	254	gluconate 5-dehydrogenase; Provisional	98.12
PRK12744	257	short chain dehydrogenase; Provisional	98.11
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	98.1
PRK06398	258	aldose dehydrogenase; Validated	98.1
PRK08643	256	acetoin reductase; Validated	98.09
PRK07856	252	short chain dehydrogenase; Provisional	98.06
PRK07102	243	short chain dehydrogenase; Provisional	98.04
PRK06114	254	short chain dehydrogenase; Provisional	98.03
PRK07478	254	short chain dehydrogenase; Provisional	98.03
PRK08267	260	short chain dehydrogenase; Provisional	98.02
PRK05866	293	short chain dehydrogenase; Provisional	98.02
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.01
PRK06947	248	glucose-1-dehydrogenase; Provisional	97.98
PRK07063	260	short chain dehydrogenase; Provisional	97.97
PRK06198	260	short chain dehydrogenase; Provisional	97.95
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.95
PRK09242	257	tropinone reductase; Provisional	97.94
PRK07985	294	oxidoreductase; Provisional	97.92
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	97.91
PRK06172	253	short chain dehydrogenase; Provisional	97.91
PRK05717	255	oxidoreductase; Validated	97.9
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.9
PRK08226	263	short chain dehydrogenase; Provisional	97.9
PRK12747	252	short chain dehydrogenase; Provisional	97.9
PRK07035	252	short chain dehydrogenase; Provisional	97.9
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.89
PRK06139	330	short chain dehydrogenase; Provisional	97.89
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.89
PRK07832	272	short chain dehydrogenase; Provisional	97.88
PRK08589	272	short chain dehydrogenase; Validated	97.88
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.88
PRK06057	255	short chain dehydrogenase; Provisional	97.87
PRK05693	274	short chain dehydrogenase; Provisional	97.87
PRK08265	261	short chain dehydrogenase; Provisional	97.85
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.84
PRK12742	237	oxidoreductase; Provisional	97.84
PRK05867	253	short chain dehydrogenase; Provisional	97.83
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.82
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.8
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.79
PRK06949	258	short chain dehydrogenase; Provisional	97.78
PRK05855	582	short chain dehydrogenase; Validated	97.77
PRK06500	249	short chain dehydrogenase; Provisional	97.76
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.76
PRK07831	262	short chain dehydrogenase; Provisional	97.72
PRK06101	240	short chain dehydrogenase; Provisional	97.71
PRK08936	261	glucose-1-dehydrogenase; Provisional	97.69
PRK06523	260	short chain dehydrogenase; Provisional	97.69
PRK07201	657	short chain dehydrogenase; Provisional	97.69
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.67
PRK09072	263	short chain dehydrogenase; Provisional	97.63
PRK08278	273	short chain dehydrogenase; Provisional	97.59
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.58
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.56
PRK07578	199	short chain dehydrogenase; Provisional	97.55
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	97.5
PRK07576	264	short chain dehydrogenase; Provisional	97.49
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	97.48
PRK08339	263	short chain dehydrogenase; Provisional	97.48
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.46
PRK06483	236	dihydromonapterin reductase; Provisional	97.45
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.44
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.43
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.4
PRK06924	251	short chain dehydrogenase; Provisional	97.39
PRK06484	520	short chain dehydrogenase; Validated	97.39
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.38
PRK07023	243	short chain dehydrogenase; Provisional	97.36
PRK09009	235	C factor cell-cell signaling protein; Provisional	97.36
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.35
PRK07062	265	short chain dehydrogenase; Provisional	97.32
PRK07677	252	short chain dehydrogenase; Provisional	97.31
PRK06197	306	short chain dehydrogenase; Provisional	97.29
PRK05872	296	short chain dehydrogenase; Provisional	97.28
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.23
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.21
PRK05599	246	hypothetical protein; Provisional	97.19
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.17
PRK08703	239	short chain dehydrogenase; Provisional	97.17
PRK06940	275	short chain dehydrogenase; Provisional	97.12
PRK08177	225	short chain dehydrogenase; Provisional	97.07
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.05
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.04
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.03
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.02
PRK07791	286	short chain dehydrogenase; Provisional	96.99
PRK06484	520	short chain dehydrogenase; Validated	96.98
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.96
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.92
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.9
PRK06125	259	short chain dehydrogenase; Provisional	96.89
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.83
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.75
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.74
PRK06953	222	short chain dehydrogenase; Provisional	96.74
PRK12367	245	short chain dehydrogenase; Provisional	96.73
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.7
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.59
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.54
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	96.49
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.43
PRK05884	223	short chain dehydrogenase; Provisional	96.26
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	96.26
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.18
PRK05854	313	short chain dehydrogenase; Provisional	96.14
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.08
PRK08862	227	short chain dehydrogenase; Provisional	95.88
KOG1611	249	consensus Predicted short chain-type dehydrogenase	95.72
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.72
PTZ00325	321	malate dehydrogenase; Provisional	95.62
PLN02780	320	ketoreductase/ oxidoreductase	95.61
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	95.51
PLN00015	308	protochlorophyllide reductase	95.32
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	95.26
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.25
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	95.09
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	94.65
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	94.51
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.35
PRK08309	177	short chain dehydrogenase; Provisional	94.06
KOG2733	423	consensus Uncharacterized membrane protein [Functi	93.96
PRK08303	305	short chain dehydrogenase; Provisional	93.56
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	92.89
KOG1208	314	consensus Dehydrogenases with different specificit	92.42
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	92.42
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	92.18
PLN00106	323	malate dehydrogenase	92.09
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	91.96
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	91.81
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	91.11
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	90.63
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	89.76
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	89.02
COG1028	251	FabG Dehydrogenases with different specificities (	88.37
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	87.03
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	82.89

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.97  E-value=9.5e-31  Score=215.65  Aligned_cols=231  Identities=13%  Similarity=0.207  Sum_probs=178.2

Q ss_pred             cCceeEEeccCCCHHHHHHhh------CC-CcEEEEccCccc--hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCC
Q 025054            4 MINCLIAQGDLHDHESLVKAI------KP-VDVVISAVGRTE--VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPI   73 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al------~g-~d~Vi~~~~~~~--~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~   73 (258)
                      ..+++.+.+|++|+++|.+++      +| +|+||++.+...  ....+++++||+++| |||||+ |+.+....     
T Consensus        38 ~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~-----  111 (285)
T TIGR03649        38 GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIPDLAPPMIKFIDFARSKG-VRRFVLLSASIIEKG-----  111 (285)
T ss_pred             CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCCChhHHHHHHHHHHHHcC-CCEEEEeeccccCCC-----
Confidence            357788999999999999999      67 999999887532  567889999999999 999999 76554321     


Q ss_pred             CCCccchhhHHHHHHHHHhC-CCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHh
Q 025054           74 EPAKSGYARKAKIRRAIEAE-GIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAV  152 (258)
Q Consensus        74 ~~~~~~~~~k~~~e~~l~~~-~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l  152 (258)
                            ...+..+++++++. +++||+|||++||+++...+....  ....+.+ +.+.|+.++++|+++|+|++++.++
T Consensus       112 ------~~~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~~l  182 (285)
T TIGR03649       112 ------GPAMGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEA--IRKENKI-YSATGDGKIPFVSADDIARVAYRAL  182 (285)
T ss_pred             ------CchHHHHHHHHHhccCCCEEEEeccHHhhhhcccccccc--cccCCeE-EecCCCCccCcccHHHHHHHHHHHh
Confidence                  11345678899885 999999999999998743211111  1122233 3456788999999999999999999


Q ss_pred             cCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhh--heeeeeEEEecCCccccC
Q 025054          153 DDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIM--LVVNFSIFMKGEQTNFEI  230 (258)
Q Consensus       153 ~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~~~~~  230 (258)
                      .++...++.|+++|| +.+|++|+++.+++++|+++++..+|.+++.+.+...++|.+..  +..++.....|....  .
T Consensus       183 ~~~~~~~~~~~l~g~-~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~--~  259 (285)
T TIGR03649       183 TDKVAPNTDYVVLGP-ELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVR--L  259 (285)
T ss_pred             cCCCcCCCeEEeeCC-ccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcccc--c
Confidence            987667889999986 59999999999999999999999999999999998888988764  233333445555321  1


Q ss_pred             CCCCcccccccCCCCcccCHHHHHhhh
Q 025054          231 DPSSGVEASELYPDVDYATVEEYLDQF  257 (258)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~s~ee~l~~~  257 (258)
                      .    .+. +.+.|.+|+||+||++++
T Consensus       260 ~----~~~-~~~~G~~p~~~~~~~~~~  281 (285)
T TIGR03649       260 N----DVV-KAVTGSKPRGFRDFAESN  281 (285)
T ss_pred             c----chH-HHHhCcCCccHHHHHHHh
Confidence            1    223 444699999999999975

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.97  E-value=4.4e-31  Score=211.46  Aligned_cols=188  Identities=28%  Similarity=0.447  Sum_probs=151.9

Q ss_pred             cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCc---cchhchHHHHHHHHHhCCccEEEcCCCCCCCCCCCCCCCCcc
Q 025054            2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGR---TEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKS   78 (258)
Q Consensus         2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~---~~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~~~~~~~~~   78 (258)
                      |+..|++++.+|++|+++|.++|+|+|+||++.+.   .....++++++||+++| |||||+|+++..........|..+
T Consensus        40 l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~~~~p~~~  118 (233)
T PF05368_consen   40 LQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESSGSEPEIP  118 (233)
T ss_dssp             HHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTTTSTTHHH
T ss_pred             hhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhhhhhhhHHHhhhccc-cceEEEEEecccccccccccccch
Confidence            45689999999999999999999999999999984   34889999999999999 999999998876643322334567


Q ss_pred             chhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeee-ccchHHHHHHHHhcCCCC
Q 025054           79 GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFN-KEEDIATYTIKAVDDPRT  157 (258)
Q Consensus        79 ~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v-~~~D~a~~~~~~l~~~~~  157 (258)
                      +++.|..+|++|++++++||+||||+||++++..+............+.++++++.+..++ +.+|+|++++.++.+|..
T Consensus       119 ~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~  198 (233)
T PF05368_consen  119 HFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEK  198 (233)
T ss_dssp             HHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGG
T ss_pred             hhhhhhhhhhhhhhccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHH
Confidence            8899999999999999999999999999998764432111111223578888888777775 999999999999999854


Q ss_pred             --CCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054          158 --LNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       158 --~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                        .|+.+.++|  +.+|++|+++++++.+|++++|.+
T Consensus       199 ~~~~~~~~~~~--~~~t~~eia~~~s~~~G~~v~y~~  233 (233)
T PF05368_consen  199 HNNGKTIFLAG--ETLTYNEIAAILSKVLGKKVKYVQ  233 (233)
T ss_dssp             TTEEEEEEEGG--GEEEHHHHHHHHHHHHTSEEEEEE
T ss_pred             hcCCEEEEeCC--CCCCHHHHHHHHHHHHCCccEEeC
Confidence              478888874  699999999999999999998864

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.95  E-value=1.3e-27  Score=199.76  Aligned_cols=183  Identities=23%  Similarity=0.274  Sum_probs=149.1

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCC
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHP   72 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~   72 (258)
                      ..|++++.+|++|++++.++++|+|+|||+++...          +.++.++++||+++| |+|||+ |+++....    
T Consensus        42 ~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~----  116 (317)
T CHL00194         42 EWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQY----  116 (317)
T ss_pred             hcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEecccccccc----
Confidence            45899999999999999999999999999876421          456789999999999 999999 87765321    


Q ss_pred             CCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHh
Q 025054           73 IEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAV  152 (258)
Q Consensus        73 ~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l  152 (258)
                        +..+|..+|..+|+++++++++||++||+.+|+++...+..+.   .......+ +++++++++|+++|+|++++.++
T Consensus       117 --~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l  190 (317)
T CHL00194        117 --PYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLISQYAIPI---LEKQPIWI-TNESTPISYIDTQDAAKFCLKSL  190 (317)
T ss_pred             --CCChHHHHHHHHHHHHHHcCCCeEEEeecHHhhhhhhhhhhhh---ccCCceEe-cCCCCccCccCHHHHHHHHHHHh
Confidence              2356788999999999999999999999999987543321111   12223333 44577889999999999999999


Q ss_pred             cCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054          153 DDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI  198 (258)
Q Consensus       153 ~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~  198 (258)
                      .++...+++|+++|+ +.+|++|+++.+.+.+|++..+..+|....
T Consensus       191 ~~~~~~~~~~ni~g~-~~~s~~el~~~~~~~~g~~~~~~~vp~~~~  235 (317)
T CHL00194        191 SLPETKNKTFPLVGP-KSWNSSEIISLCEQLSGQKAKISRVPLFLL  235 (317)
T ss_pred             cCccccCcEEEecCC-CccCHHHHHHHHHHHhCCCCeEEeCCHHHH
Confidence            887668999999986 599999999999999999999998887544

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.91  E-value=2.2e-23  Score=178.32  Aligned_cols=182  Identities=23%  Similarity=0.242  Sum_probs=148.0

Q ss_pred             CceeEEeccCCCHHHHHHhhC----CCcEEEEccCccc----------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK----PVDVVISAVGRTE----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDA   69 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~----g~d~Vi~~~~~~~----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~   69 (258)
                      .+++++.+|++|++++.++++    ++|+|||+++...          .....+++++|++.| ++|||+ |+.+...  
T Consensus       111 ~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~--  187 (390)
T PLN02657        111 PGAEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK--  187 (390)
T ss_pred             CCceEEEeeCCCHHHHHHHHHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC--
Confidence            478999999999999999998    5999999876421          466789999999999 999998 7765431  


Q ss_pred             CCCCCCCccchhhHHHHHHHHHh--CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCcee-eeeccchHHH
Q 025054           70 GHPIEPAKSGYARKAKIRRAIEA--EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKA-IFNKEEDIAT  146 (258)
Q Consensus        70 ~~~~~~~~~~~~~k~~~e~~l~~--~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~-~~v~~~D~a~  146 (258)
                           +..+|..+|..+|+++++  ++++||++||+.||+++...+..    ...++.+.++|+|+..+ .+|+++|+|+
T Consensus       188 -----p~~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~~~~----~~~g~~~~~~GdG~~~~~~~I~v~DlA~  258 (390)
T PLN02657        188 -----PLLEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQVEI----VKDGGPYVMFGDGKLCACKPISEADLAS  258 (390)
T ss_pred             -----cchHHHHHHHHHHHHHHhccCCCCEEEEccHHHhcccHHHHHh----hccCCceEEecCCcccccCceeHHHHHH
Confidence                 344677899999999986  89999999999999865332111    12334566778887654 5799999999


Q ss_pred             HHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054          147 YTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI  198 (258)
Q Consensus       147 ~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~  198 (258)
                      +++.++.++...+++|+++||++.+|++|+++.+.+.+|+++++..+|...+
T Consensus       259 ~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~  310 (390)
T PLN02657        259 FIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIM  310 (390)
T ss_pred             HHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHH
Confidence            9999998776678999999876689999999999999999999999987644

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.90  E-value=8.9e-23  Score=166.92  Aligned_cols=185  Identities=21%  Similarity=0.258  Sum_probs=139.3

Q ss_pred             eEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCC----
Q 025054            8 LIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVD----   68 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~----   68 (258)
                      +++++|++|.+++.++++|+|+|||+++...              +.+++++++||++++ |||+|+ |+..+...    
T Consensus        48 ~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~  126 (280)
T PF01073_consen   48 EYIQGDITDPESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKG  126 (280)
T ss_pred             eEEEeccccHHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCC
Confidence            3899999999999999999999999987421              789999999999999 999999 76543111    


Q ss_pred             -------CCCC--CCCCccchhhHHHHHHHHHh-CC--------CCeEEEecCcccccCcCCCCCCCCCCCCCC-ceEec
Q 025054           69 -------AGHP--IEPAKSGYARKAKIRRAIEA-EG--------IPHTYVSCNCSFGFFLPTMAQPGATAPPRE-NILFY  129 (258)
Q Consensus        69 -------~~~~--~~~~~~~~~~k~~~e~~l~~-~~--------~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  129 (258)
                             +..+  ..+...|..+|+.+|+++.+ .+        +.+++|||+.+||+....+..........+ .....
T Consensus       127 ~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~  206 (280)
T PF01073_consen  127 DPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQI  206 (280)
T ss_pred             CCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceee
Confidence                   1111  11334667799999999876 22        889999999999976543321111111122 45667


Q ss_pred             cCCCceeeeeccchHHHHHHHHhc---CC----CCCCceEEEcCCCCccC-HHHHHHHHHHHhCCccee-EecC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVD---DP----RTLNKTLYLRPPKNIYS-FKELVALWEKKIGKTLEK-IYVT  194 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~---~~----~~~~~~~~l~g~~~~~t-~~e~~~~~~~~~g~~~~~-~~~~  194 (258)
                      |+++...++++++|+|.+.+.+.+   ++    ...|+.|+++. +++++ +.|+...+.+.+|.+.+. +.+|
T Consensus       207 g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd-~~p~~~~~~f~~~~~~~~G~~~~~~~~lp  279 (280)
T PF01073_consen  207 GDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITD-GEPVPSFWDFMRPLWEALGYPPPKSISLP  279 (280)
T ss_pred             cCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEEC-CCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence            888889999999999999987653   22    35689999997 56888 999999999999987665 5554

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=1.6e-22  Score=159.34  Aligned_cols=183  Identities=22%  Similarity=0.252  Sum_probs=150.9

Q ss_pred             cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCcc-EEEc-CC--
Q 025054            4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIK-RFFP-TE--   62 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk-~~v~-S~--   62 (258)
                      +++.+++++|+.|.+.+.+.|+  ..|+|+|+++-+.               +-++.+|++||++.. .+ ||++ |+  
T Consensus        50 ~~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HISTDE  128 (340)
T COG1088          50 SPRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHISTDE  128 (340)
T ss_pred             CCCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhc-ccceEEEecccc
Confidence            3678999999999999999999  5899999998542               678999999999988 54 8998 74  


Q ss_pred             -CCCC------CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC--CC-CCCCCCCCCCceEe
Q 025054           63 -YGSN------VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT--MA-QPGATAPPRENILF  128 (258)
Q Consensus        63 -~~~~------~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~--~~-~~~~~~~~~~~~~~  128 (258)
                       ||.-      .++.++..|.+||.+||+.....+++    .|++.++.||+.-||++.-.  +. ......+.+.++++
T Consensus       129 VYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpv  208 (340)
T COG1088         129 VYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPV  208 (340)
T ss_pred             ccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCce
Confidence             4432      22456788999999999999888876    79999999999999975321  10 00001245668999


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE  189 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~  189 (258)
                      +|+|.+.++|++++|-++++-.++...+ .|++|||+| +++.+-.|+++.+++.+|+..+
T Consensus       209 YGdG~~iRDWl~VeDh~~ai~~Vl~kg~-~GE~YNIgg-~~E~~Nlevv~~i~~~l~~~~~  267 (340)
T COG1088         209 YGDGLQIRDWLYVEDHCRAIDLVLTKGK-IGETYNIGG-GNERTNLEVVKTICELLGKDKP  267 (340)
T ss_pred             ecCCcceeeeEEeHhHHHHHHHHHhcCc-CCceEEeCC-CccchHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999875 699999998 6799999999999999998665

>PLN00016 RNA-binding protein; Provisional

Probab=99.86  E-value=6e-21  Score=163.24  Aligned_cols=188  Identities=16%  Similarity=0.143  Sum_probs=138.5

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc-CCCCCCCCC----CCCCCCCcc
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDA----GHPIEPAKS   78 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~----~~~~~~~~~   78 (258)
                      ..|++++.+|+.|.+.+. +..++|+|||+.+. ....++++++||+++| |+|||+ |+.+.....    .....+..+
T Consensus       109 ~~~v~~v~~D~~d~~~~~-~~~~~d~Vi~~~~~-~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p  185 (378)
T PLN00016        109 SAGVKTVWGDPADVKSKV-AGAGFDVVYDNNGK-DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDAVKP  185 (378)
T ss_pred             hcCceEEEecHHHHHhhh-ccCCccEEEeCCCC-CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCcCCC
Confidence            347899999998744333 23589999999764 3667899999999999 999998 765442111    000011112


Q ss_pred             chhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCC-C-CCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054           79 GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMA-Q-PGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus        79 ~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      . .+|..+|+++++.+++||++||+.+||+...... . +.......+.+.++|+|++.++++|++|+|++++.++.++.
T Consensus       186 ~-~sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~  264 (378)
T PLN00016        186 K-AGHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK  264 (378)
T ss_pred             c-chHHHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc
Confidence            2 2799999999999999999999999997532100 0 00001223456778888999999999999999999998876


Q ss_pred             CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHH
Q 025054          157 TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTED  196 (258)
Q Consensus       157 ~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~  196 (258)
                      ..+++|+++++ +.+|++|+++.+.+.+|.+.++...+.+
T Consensus       265 ~~~~~yni~~~-~~~s~~el~~~i~~~~g~~~~i~~~~~~  303 (378)
T PLN00016        265 AAGQIFNIVSD-RAVTFDGMAKACAKAAGFPEEIVHYDPK  303 (378)
T ss_pred             ccCCEEEecCC-CccCHHHHHHHHHHHhCCCCceeecCcc
Confidence            57899999984 5899999999999999998776665543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.85  E-value=1.5e-20  Score=148.96  Aligned_cols=187  Identities=20%  Similarity=0.266  Sum_probs=142.3

Q ss_pred             eeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEcCCC----CC
Q 025054            7 CLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFPTEY----GS   65 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~S~~----~~   65 (258)
                      ++++++|+.|.+.|.+.|+  ..|+|||+++...               +.++.+|+++|+++| |++||+||.    |.
T Consensus        46 ~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~  124 (329)
T COG1087          46 FKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGE  124 (329)
T ss_pred             CceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCC
Confidence            5899999999999999997  6899999998642               788999999999999 999999553    33


Q ss_pred             CC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-CCCC--CC---------CCCC-CC
Q 025054           66 NV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-MAQP--GA---------TAPP-RE  124 (258)
Q Consensus        66 ~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~~~~--~~---------~~~~-~~  124 (258)
                      ..    .+..+..|.+||..+|..+|++|+.    .+++++++|-....|.-.+. +...  +.         .++. ..
T Consensus       125 p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~  204 (329)
T COG1087         125 PTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRD  204 (329)
T ss_pred             CCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCc
Confidence            21    2233455789999999999999975    68999999976666632111 0000  00         0112 23


Q ss_pred             ceEecc------CCCceeeeeccchHHHHHHHHhcCCCCC--CceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054          125 NILFYG------DGQPKAIFNKEEDIATYTIKAVDDPRTL--NKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE  195 (258)
Q Consensus       125 ~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~~~~--~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~  195 (258)
                      ++.++|      ||+-.+++||+.|+|++.+.+++.-...  ..+||++. +.-+|..|+++.+.+++|++++++-.+-
T Consensus       205 ~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~-G~G~SV~evi~a~~~vtg~~ip~~~~~R  282 (329)
T COG1087         205 KLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGS-GNGFSVLEVIEAAKKVTGRDIPVEIAPR  282 (329)
T ss_pred             eeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccC-CCceeHHHHHHHHHHHhCCcCceeeCCC
Confidence            466666      4777899999999999999998764222  25788875 7899999999999999999998877653

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.85  E-value=2.3e-20  Score=158.01  Aligned_cols=179  Identities=17%  Similarity=0.166  Sum_probs=136.9

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSN   66 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~   66 (258)
                      +++++.+|+.|.+.+.++++++|+|||+++...               +.++.+++++|++.| +++||+ |+   ||..
T Consensus        70 ~~~~~~~Di~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~  148 (348)
T PRK15181         70 RFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDH  148 (348)
T ss_pred             ceEEEEccCCCHHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCC
Confidence            467899999999999999999999999997421               577899999999999 999998 64   3422


Q ss_pred             CC----CCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-----C--CCCCCCCceEeccC
Q 025054           67 VD----AGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-----G--ATAPPRENILFYGD  131 (258)
Q Consensus        67 ~~----~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~g~  131 (258)
                      .+    +.....|..+|..+|..+|.+++.    .+++++++||+.+||+........     .  .....++.+.++|+
T Consensus       149 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~  228 (348)
T PRK15181        149 PDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGD  228 (348)
T ss_pred             CCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCC
Confidence            11    111223556788899999988754    589999999999999754211000     0  01123446778899


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      |+++++|+|++|+++++..++..+.  ..+++||+++ ++.+|++|+++.+.+.++.
T Consensus       229 g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~-g~~~s~~e~~~~i~~~~~~  284 (348)
T PRK15181        229 GSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAV-GDRTSLNELYYLIRDGLNL  284 (348)
T ss_pred             CCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecC-CCcEeHHHHHHHHHHHhCc
Confidence            9999999999999999988775432  3578999986 5699999999999999874

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.82  E-value=1e-18  Score=148.88  Aligned_cols=184  Identities=18%  Similarity=0.220  Sum_probs=138.4

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCcc----------------chhchHHHHHHHHHhCCccEEEc-CC---CCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRT----------------EVEDQFKLIAAIKEVGNIKRFFP-TE---YGS   65 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~----------------~~~~~~~li~aa~~~g~vk~~v~-S~---~~~   65 (258)
                      +++++.+|+.|.+.+.++++++|+|||+++..                ++....+++++|++.+ +|+||+ |+   |+.
T Consensus        65 ~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~  143 (370)
T PLN02695         65 CHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPE  143 (370)
T ss_pred             cceEEECCCCCHHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCC
Confidence            36788899999999999999999999999632                1456789999999999 999998 65   332


Q ss_pred             CCC--------CC--CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC--C--C-CCC--CC-CC
Q 025054           66 NVD--------AG--HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA--Q--P-GAT--AP-PR  123 (258)
Q Consensus        66 ~~~--------~~--~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~--~--~-~~~--~~-~~  123 (258)
                      ...        +.  .+..|.++|..+|..+|+.++.    .+++++++||+.+||+......  .  + .+.  .. ..
T Consensus       144 ~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~  223 (370)
T PLN02695        144 FKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTST  223 (370)
T ss_pred             ccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCC
Confidence            110        01  1234556777899999998754    6899999999999997432100  0  0 000  01 12


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEec
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYV  193 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~  193 (258)
                      ..+.++|+|++.++|+|++|+++++..++..+  .++.||+++ ++.+|++|+++.+.+..|.+.++...
T Consensus       224 ~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~--~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~i~~~  290 (370)
T PLN02695        224 DEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD--FREPVNIGS-DEMVSMNEMAEIALSFENKKLPIKHI  290 (370)
T ss_pred             CCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc--CCCceEecC-CCceeHHHHHHHHHHHhCCCCCceec
Confidence            46778899999999999999999999987765  467899987 56999999999999999976655443

>PLN02427 UDP-apiose/xylose synthase

Probab=99.81  E-value=3.7e-19  Score=152.75  Aligned_cols=179  Identities=19%  Similarity=0.239  Sum_probs=133.4

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---CCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSN   66 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~   66 (258)
                      +++++.+|+.|.+.+.++++++|+|||+++...               +.++.+++++|++++  ++||+ |+.   |..
T Consensus        66 ~~~~~~~Dl~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~  143 (386)
T PLN02427         66 RIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKT  143 (386)
T ss_pred             CeEEEEcCCCChHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCC
Confidence            689999999999999999999999999997311               445778999998876  78988 653   321


Q ss_pred             C----CCCCCC----------------------CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-
Q 025054           67 V----DAGHPI----------------------EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-  115 (258)
Q Consensus        67 ~----~~~~~~----------------------~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-  115 (258)
                      .    .+..+.                      .+.++|..+|..+|+++..    .+++++++||+.+||+....... 
T Consensus       144 ~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~  223 (386)
T PLN02427        144 IGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGI  223 (386)
T ss_pred             cCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccc
Confidence            1    000000                      1224677899999999865    58999999999999975321100 


Q ss_pred             -------CC------CCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcCCCCccCHHHHHHHHH
Q 025054          116 -------PG------ATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRPPKNIYSFKELVALWE  181 (258)
Q Consensus       116 -------~~------~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~~~  181 (258)
                             ..      ......+.+.++|+|++.++|||++|+|++++.+++++. ..+++||++++++.+|++|+++.+.
T Consensus       224 ~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~  303 (386)
T PLN02427        224 DGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMT  303 (386)
T ss_pred             cccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHH
Confidence                   00      001234456778888899999999999999999998763 3578999996434899999999999


Q ss_pred             HHhCC
Q 025054          182 KKIGK  186 (258)
Q Consensus       182 ~~~g~  186 (258)
                      +.+|.
T Consensus       304 ~~~g~  308 (386)
T PLN02427        304 EVYAK  308 (386)
T ss_pred             HHhcc
Confidence            99985

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.81  E-value=5.6e-19  Score=153.46  Aligned_cols=185  Identities=22%  Similarity=0.224  Sum_probs=136.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC--CCcEEEEccCcc------------------chhchHHHHHHHHHhCCcc-EEEc-CC-
Q 025054            6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRT------------------EVEDQFKLIAAIKEVGNIK-RFFP-TE-   62 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~------------------~~~~~~~li~aa~~~g~vk-~~v~-S~-   62 (258)
                      +++++.+|+.|.+.+.++++  ++|+|||+++..                  ++.++.+++++|++.| ++ +||+ |+ 
T Consensus       114 ~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~  192 (442)
T PLN02572        114 EIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTM  192 (442)
T ss_pred             cceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecc
Confidence            58899999999999999998  489999998531                  1567889999999999 86 8997 54 


Q ss_pred             --CCCCCC---C-----------C---CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCC------
Q 025054           63 --YGSNVD---A-----------G---HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTM------  113 (258)
Q Consensus        63 --~~~~~~---~-----------~---~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~------  113 (258)
                        ||....   +           .   .+..|.++|..+|...|.+++.    .+++++++|++.+||+....-      
T Consensus       193 ~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~l  272 (442)
T PLN02572        193 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEEL  272 (442)
T ss_pred             eecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCccccccccc
Confidence              442110   0           0   1233556788899999988754    599999999999999753210      


Q ss_pred             CC-------C-C------CCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCC--ceEEEcCCCCccCHHHHH
Q 025054          114 AQ-------P-G------ATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLN--KTLYLRPPKNIYSFKELV  177 (258)
Q Consensus       114 ~~-------~-~------~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~--~~~~l~g~~~~~t~~e~~  177 (258)
                      ..       . .      .....++.+.++|+|++.++|+|++|+++++..+++.+...|  ..||+++  ..+|++|++
T Consensus       273 i~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs--~~~si~el~  350 (442)
T PLN02572        273 INRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT--EQFSVNELA  350 (442)
T ss_pred             ccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC--CceeHHHHH
Confidence            00       0 0      001123456788999999999999999999999998653233  4788874  479999999


Q ss_pred             HHHHHH---hCCcceeEec
Q 025054          178 ALWEKK---IGKTLEKIYV  193 (258)
Q Consensus       178 ~~~~~~---~g~~~~~~~~  193 (258)
                      +.+.+.   +|.+..+...
T Consensus       351 ~~i~~~~~~~g~~~~~~~~  369 (442)
T PLN02572        351 KLVTKAGEKLGLDVEVISV  369 (442)
T ss_pred             HHHHHHHHhhCCCCCeeeC
Confidence            999999   8876555443

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.80  E-value=5.5e-18  Score=143.51  Aligned_cols=183  Identities=22%  Similarity=0.242  Sum_probs=135.1

Q ss_pred             CceeEEeccCC-CHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CC
Q 025054            5 INCLIAQGDLH-DHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YG   64 (258)
Q Consensus         5 ~gv~~~~~D~~-d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~   64 (258)
                      .+++++.+|+. +.+.+.++++++|+|||+++...               +.++.+++++|++.+  ++||+ |+   ||
T Consensus        46 ~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg  123 (347)
T PRK11908         46 PRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYG  123 (347)
T ss_pred             CCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeec
Confidence            46889999997 77888899999999999986421               456789999999987  58887 55   33


Q ss_pred             CCCC-----CCCC------CCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-----CC------
Q 025054           65 SNVD-----AGHP------IEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-----GA------  118 (258)
Q Consensus        65 ~~~~-----~~~~------~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-----~~------  118 (258)
                      ....     +..+      ..|.++|..+|..+|++++.    .+++++++|++.+||+....+...     ..      
T Consensus       124 ~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~  203 (347)
T PRK11908        124 MCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLG  203 (347)
T ss_pred             cCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHH
Confidence            2111     1110      12344677799999998864    689999999999999764221100     00      


Q ss_pred             CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054          119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE  189 (258)
Q Consensus       119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~  189 (258)
                      ....++.+.+.++|++.++|+|++|+++++..++..+.  ..++.||+++++..+|++|+++.+.+.+|....
T Consensus       204 ~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~  276 (347)
T PRK11908        204 HIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPE  276 (347)
T ss_pred             HHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccc
Confidence            01223456677888999999999999999999998753  457899999754579999999999999996443

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.80  E-value=4.7e-19  Score=138.96  Aligned_cols=178  Identities=24%  Similarity=0.246  Sum_probs=144.2

Q ss_pred             eeEEeccCCCHHHHHHhhCCCcEEEEccCccc-----------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCC
Q 025054            7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIE   74 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~   74 (258)
                      +-+...|+.|+++++++.+..++||++++-..           ..+.++|+..|+++| |+|||+ |.+|++..      
T Consensus       111 vl~~~fd~~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv~------  183 (391)
T KOG2865|consen  111 VLFMKFDLRDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGANVK------  183 (391)
T ss_pred             eeeeccCCCCHHHHHHHHHhCcEEEEeeccccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhcccccc------
Confidence            56678899999999999999999999998542           678899999999999 999999 99997643      


Q ss_pred             CCccchhhHHHHHHHHHhCCCCeEEEecCcccccC---cCCCCCCCCCCCCCCceEeccCCC-ceeeeeccchHHHHHHH
Q 025054           75 PAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFF---LPTMAQPGATAPPRENILFYGDGQ-PKAIFNKEEDIATYTIK  150 (258)
Q Consensus        75 ~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~-~~~~~v~~~D~a~~~~~  150 (258)
                      ..+.+..+|+..|..+++.=-..|||||+.+||..   ++.+..+.   ..-+.+++++.|. ..-..|++.|+|.+|+.
T Consensus       184 s~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~---rk~~~~pL~~~GekT~K~PVyV~DVaa~Ivn  260 (391)
T KOG2865|consen  184 SPSRMLRSKAAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFW---RKFGFLPLIGKGEKTVKQPVYVVDVAAAIVN  260 (391)
T ss_pred             ChHHHHHhhhhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHH---HhcCceeeecCCcceeeccEEEehHHHHHHH
Confidence            35678899999999999976679999999999943   33222211   1123567777663 33447899999999999


Q ss_pred             HhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054          151 AVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE  195 (258)
Q Consensus       151 ~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~  195 (258)
                      ++++|...|++|.+.||. .++..|+++.+-+...+-..|...+.
T Consensus       261 AvkDp~s~Gktye~vGP~-~yql~eLvd~my~~~~~~~ry~r~~m  304 (391)
T KOG2865|consen  261 AVKDPDSMGKTYEFVGPD-RYQLSELVDIMYDMAREWPRYVRLPM  304 (391)
T ss_pred             hccCccccCceeeecCCc-hhhHHHHHHHHHHHHhhccccccCCc
Confidence            999998899999999985 99999999999988776556666554

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.80  E-value=1.3e-18  Score=159.16  Aligned_cols=182  Identities=18%  Similarity=0.185  Sum_probs=138.4

Q ss_pred             CceeEEeccCCCHHHHHHhh--CCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---C
Q 025054            5 INCLIAQGDLHDHESLVKAI--KPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---Y   63 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al--~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~   63 (258)
                      .+++++.+|++|.+.+..++  .++|+|||+++...               +.++.+++++|++.+++++||+ |+   |
T Consensus        57 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vy  136 (668)
T PLN02260         57 PNFKFVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY  136 (668)
T ss_pred             CCeEEEECCCCChHHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHh
Confidence            46899999999998888776  58999999998532               4567899999999876899998 65   3


Q ss_pred             CCCC-------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC--C-CCCCCCCCCCCceEec
Q 025054           64 GSNV-------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT--M-AQPGATAPPRENILFY  129 (258)
Q Consensus        64 ~~~~-------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~  129 (258)
                      |...       .+..+..|.++|..+|..+|+++++    .+++++++||+.+||.....  + ..+......++.+.++
T Consensus       137 g~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~  216 (668)
T PLN02260        137 GETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIH  216 (668)
T ss_pred             CCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEe
Confidence            3211       1112233567788899999999864    58999999999999964311  0 0000011233457788


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      |+|++.++|+|++|+|+++..++..+ ..+++||++++ +.+|+.|+++.+.+.+|.+.
T Consensus       217 g~g~~~r~~ihV~Dva~a~~~~l~~~-~~~~vyni~~~-~~~s~~el~~~i~~~~g~~~  273 (668)
T PLN02260        217 GDGSNVRSYLYCEDVAEAFEVVLHKG-EVGHVYNIGTK-KERRVIDVAKDICKLFGLDP  273 (668)
T ss_pred             cCCCceEeeEEHHHHHHHHHHHHhcC-CCCCEEEECCC-CeeEHHHHHHHHHHHhCCCC
Confidence            99999999999999999999988764 35789999974 58999999999999999753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.79  E-value=2.8e-18  Score=143.29  Aligned_cols=179  Identities=21%  Similarity=0.291  Sum_probs=133.7

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCcc-EEEc-CC---C
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIK-RFFP-TE---Y   63 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk-~~v~-S~---~   63 (258)
                      +++++.+|++|++++.+++++  +|+|||+++...               +.+..+++++|++.+ ++ ++|+ |+   +
T Consensus        51 ~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~  129 (317)
T TIGR01181        51 RYRFVKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVY  129 (317)
T ss_pred             CcEEEEcCCcCHHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeecccee
Confidence            578899999999999999997  899999997521               456789999999876 44 7887 65   3


Q ss_pred             CCCC-----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC--CC-CCCCCCCCCCceEeccC
Q 025054           64 GSNV-----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT--MA-QPGATAPPRENILFYGD  131 (258)
Q Consensus        64 ~~~~-----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~  131 (258)
                      |...     .+..+..+...|..+|..+|.+++.    .+++++++||+.+||.....  +. .+.......+.+.++++
T Consensus       130 g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (317)
T TIGR01181       130 GDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGD  209 (317)
T ss_pred             CCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCC
Confidence            3211     1112233455677899999988763    58999999999999964321  00 00000122335677888


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      |++.++|+|++|+++++..+++++ ..++.|+++++ +.+|+.|+++.+.+.+|.+
T Consensus       210 g~~~~~~i~v~D~a~~~~~~~~~~-~~~~~~~~~~~-~~~s~~~~~~~i~~~~~~~  263 (317)
T TIGR01181       210 GQQVRDWLYVEDHCRAIYLVLEKG-RVGETYNIGGG-NERTNLEVVETILELLGKD  263 (317)
T ss_pred             CceEEeeEEHHHHHHHHHHHHcCC-CCCceEEeCCC-CceeHHHHHHHHHHHhCCC
Confidence            899999999999999999998764 35789999874 5899999999999999974

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.79  E-value=3.2e-18  Score=145.37  Aligned_cols=180  Identities=18%  Similarity=0.250  Sum_probs=134.8

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHh---------CCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEV---------GNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~---------g~vk~~v   59 (258)
                      .++++.+|+.|.+++.+++++  +|+|||+++...               +.++.+++++|++.         + +++||
T Consensus        52 ~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i  130 (355)
T PRK10217         52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFH  130 (355)
T ss_pred             ceEEEECCCcChHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEE
Confidence            467889999999999999984  899999997521               56788999999863         5 78999


Q ss_pred             c-CC---CCCC------CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC-CCCC--CCCC
Q 025054           60 P-TE---YGSN------VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA-QPGA--TAPP  122 (258)
Q Consensus        60 ~-S~---~~~~------~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~-~~~~--~~~~  122 (258)
                      + |+   |+..      .++..+..|..+|..+|..+|.+++.    .+++++++||+.+||+....-. ...+  ....
T Consensus       131 ~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~  210 (355)
T PRK10217        131 HISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALA  210 (355)
T ss_pred             EecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhc
Confidence            8 65   3311      11112233556777899999988854    6899999999999997642100 0000  0122


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      ++.+.++|+|++.++|+|++|+++++..++..+. .++.||+++ ++.+|++|+++.+.+.+|+..
T Consensus       211 ~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~-~~~~yni~~-~~~~s~~~~~~~i~~~~~~~~  274 (355)
T PRK10217        211 GKPLPVYGNGQQIRDWLYVEDHARALYCVATTGK-VGETYNIGG-HNERKNLDVVETICELLEELA  274 (355)
T ss_pred             CCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCC-CCCeEEeCC-CCcccHHHHHHHHHHHhcccc
Confidence            3456778999999999999999999999987643 578999997 468999999999999998643

>PLN02214 cinnamoyl-CoA reductase

Probab=99.77  E-value=6.2e-18  Score=142.79  Aligned_cols=174  Identities=17%  Similarity=0.128  Sum_probs=126.6

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------hhchHHHHHHHHHhCCccEEEc-CCCCCC----C---
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN----V---   67 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~----~---   67 (258)
                      +++++.+|++|.+++.++++++|+|||+++...          +.++.+++++|++++ +++||+ |+.++.    .   
T Consensus        61 ~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~  139 (342)
T PLN02214         61 RLILCKADLQDYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDP  139 (342)
T ss_pred             cEEEEecCcCChHHHHHHHhcCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCC
Confidence            478899999999999999999999999997532          677899999999999 999998 653211    1   


Q ss_pred             ----CCCC------CCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC--C-CCCCCCCCceEecc
Q 025054           68 ----DAGH------PIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ--P-GATAPPRENILFYG  130 (258)
Q Consensus        68 ----~~~~------~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~g  130 (258)
                          ++..      ...+..+|..+|..+|+++..    .+++++++||+.+||+.......  . .......+..... 
T Consensus       140 ~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-  218 (342)
T PLN02214        140 EAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY-  218 (342)
T ss_pred             CcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccC-
Confidence                0100      111334577799999998864    58999999999999975431100  0 0000001111222 


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                       +++.++|||++|+|++++.+++.+. .++.|++++  ...|++|+++.+.+.++
T Consensus       219 -~~~~~~~i~V~Dva~a~~~al~~~~-~~g~yn~~~--~~~~~~el~~~i~~~~~  269 (342)
T PLN02214        219 -ANLTQAYVDVRDVALAHVLVYEAPS-ASGRYLLAE--SARHRGEVVEILAKLFP  269 (342)
T ss_pred             -CCCCcCeeEHHHHHHHHHHHHhCcc-cCCcEEEec--CCCCHHHHHHHHHHHCC
Confidence             3456899999999999999998764 456888875  37899999999999986

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.76  E-value=1.4e-17  Score=151.75  Aligned_cols=181  Identities=22%  Similarity=0.240  Sum_probs=132.7

Q ss_pred             CceeEEeccCCCHHH-HHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CC
Q 025054            5 INCLIAQGDLHDHES-LVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YG   64 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~-l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~   64 (258)
                      .+++++.+|++|.+. +.++++++|+|||+++...               +.++.++++||++++  ++||+ |+   ||
T Consensus       360 ~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg  437 (660)
T PRK08125        360 PRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYG  437 (660)
T ss_pred             CceEEEeccccCcHHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcC
Confidence            368899999998655 6788999999999987321               567789999999987  68887 55   33


Q ss_pred             CCC----CCCC------CC-CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC--C---C------C
Q 025054           65 SNV----DAGH------PI-EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ--P---G------A  118 (258)
Q Consensus        65 ~~~----~~~~------~~-~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~--~---~------~  118 (258)
                      ...    ++..      +. .|.++|..+|..+|++++.    .+++++++||+.+||+....+..  .   .      .
T Consensus       438 ~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~  517 (660)
T PRK08125        438 MCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL  517 (660)
T ss_pred             CCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHH
Confidence            211    1111      00 1234577899999999854    58999999999999975321100  0   0      0


Q ss_pred             CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      ....++.+.++|+|++.++|+|++|+++++..+++.+.  ..+++|+++++...+|++|+++.+.+.+|.+
T Consensus       518 ~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        518 NLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             HhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence            11224456778889999999999999999999988652  2467899986423799999999999999964

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.76  E-value=6.9e-17  Score=136.29  Aligned_cols=187  Identities=16%  Similarity=0.227  Sum_probs=132.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC--
Q 025054            6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS--   65 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~--   65 (258)
                      ++.++.+|++|.+++.++++  ++|+|||+++...               +.+..+++++|+++| +++||+ |+.+.  
T Consensus        51 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg  129 (338)
T PRK10675         51 HPTFVEGDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYG  129 (338)
T ss_pred             CceEEEccCCCHHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhC
Confidence            46778999999999999987  6899999986421               356789999999999 999998 65422  


Q ss_pred             -CC----CCCCCC-CCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCC------C-CCC-----CCC
Q 025054           66 -NV----DAGHPI-EPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQ------P-GAT-----APP  122 (258)
Q Consensus        66 -~~----~~~~~~-~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~------~-~~~-----~~~  122 (258)
                       ..    ++..+. .|..+|..+|..+|+++++     .+++++++|++.+||.....+..      . ...     ...
T Consensus       130 ~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~  209 (338)
T PRK10675        130 DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAV  209 (338)
T ss_pred             CCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHh
Confidence             11    111111 3456777799999999864     36889999998888753111000      0 000     011


Q ss_pred             --CCceEecc------CCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054          123 --RENILFYG------DGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       123 --~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                        ...+.++|      +|.+.++++|++|+|++++.+++..  ...+++|++++ ++.+|++|+++.+.+.+|.+.++..
T Consensus       210 ~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~  288 (338)
T PRK10675        210 GRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGA-GVGSSVLDVVNAFSKACGKPVNYHF  288 (338)
T ss_pred             cCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecC-CCceeHHHHHHHHHHHhCCCCCeee
Confidence              11233443      5778899999999999999998752  22457999987 4689999999999999998776654


Q ss_pred             cC
Q 025054          193 VT  194 (258)
Q Consensus       193 ~~  194 (258)
                      .+
T Consensus       289 ~~  290 (338)
T PRK10675        289 AP  290 (338)
T ss_pred             CC
Confidence            43

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.76  E-value=9.8e-18  Score=136.24  Aligned_cols=176  Identities=16%  Similarity=0.137  Sum_probs=125.6

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCC--
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVD--   68 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~--   68 (258)
                      ..+++.+|+.|.+++.+|++|||.|||++.+..              +.+++|+++||+++++|||+|+ |+..+-..  
T Consensus        58 ~l~l~~aDL~d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~  137 (327)
T KOG1502|consen   58 RLKLFKADLLDEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNG  137 (327)
T ss_pred             cceEEeccccccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCC
Confidence            378999999999999999999999999998742              7889999999999988999999 76543211  


Q ss_pred             ----CCCCCCC------------CccchhhHHHHHHHH----HhCCCCeEEEecCcccccCcCCCCCCCC---CCCCCCc
Q 025054           69 ----AGHPIEP------------AKSGYARKAKIRRAI----EAEGIPHTYVSCNCSFGFFLPTMAQPGA---TAPPREN  125 (258)
Q Consensus        69 ----~~~~~~~------------~~~~~~~k~~~e~~l----~~~~~~~t~lr~~~~~~~~~~~~~~~~~---~~~~~~~  125 (258)
                          .....+.            ...|..+|..+|+..    ++.+++.+.|.|+.++|+.+..-.....   ....++.
T Consensus       138 ~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~  217 (327)
T KOG1502|consen  138 PNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGL  217 (327)
T ss_pred             cCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcc
Confidence                1111111            123445899998765    4468999999999999987644111100   0011222


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      ...+.  +....+||++|+|++.+.+++.|...| .|.+.+  +..++.|+++++.+.+..
T Consensus       218 ~~~~~--n~~~~~VdVrDVA~AHv~a~E~~~a~G-Ryic~~--~~~~~~ei~~~l~~~~P~  273 (327)
T KOG1502|consen  218 AETYP--NFWLAFVDVRDVALAHVLALEKPSAKG-RYICVG--EVVSIKEIADILRELFPD  273 (327)
T ss_pred             cccCC--CCceeeEeHHHHHHHHHHHHcCcccCc-eEEEec--CcccHHHHHHHHHHhCCC
Confidence            22221  334559999999999999999997554 555553  477899999999988753

>PLN02686 cinnamoyl-CoA reductase

Probab=99.76  E-value=1.9e-17  Score=140.99  Aligned_cols=181  Identities=14%  Similarity=0.075  Sum_probs=128.5

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHh-CCccEEEc-CCC-----
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEV-GNIKRFFP-TEY-----   63 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~-g~vk~~v~-S~~-----   63 (258)
                      +++++.+|++|.+++.++++++|.|||+++...               +.++.++++||++. + |+|||+ |+.     
T Consensus       108 ~~~~v~~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vy  186 (367)
T PLN02686        108 GIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVW  186 (367)
T ss_pred             ceEEEEcCCCCHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcc
Confidence            578899999999999999999999999986421               45678999999986 7 999998 653     


Q ss_pred             CCC--CC------CC------CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           64 GSN--VD------AG------HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        64 ~~~--~~------~~------~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      +..  ..      +.      .+..+..+|..+|..+|++++.    .++++++|||+++||+...............+.
T Consensus       187 g~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~  266 (367)
T PLN02686        187 RQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGA  266 (367)
T ss_pred             cccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCC
Confidence            110  00      00      0111334577799999998853    589999999999999864211100000111223


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      +.++|+|.  .+++|++|++++++.+++.+  ...++.| +++ ++.+|++|+++.+.+.+|.+....
T Consensus       267 ~~~~g~g~--~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~-g~~~s~~e~~~~i~~~~g~~~~~~  330 (367)
T PLN02686        267 QEMLADGL--LATADVERLAEAHVCVYEAMGNKTAFGRY-ICF-DHVVSREDEAEELARQIGLPINKI  330 (367)
T ss_pred             CccCCCCC--cCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEe-CCCccHHHHHHHHHHHcCCCCCcC
Confidence            45566554  46999999999999999753  2345667 654 569999999999999999765543

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.76  E-value=1.8e-17  Score=143.78  Aligned_cols=178  Identities=16%  Similarity=0.207  Sum_probs=128.2

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---CC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GS   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~   65 (258)
                      .+++++.+|+.+.     ++.++|+|||+++...               +.++.++++||+++| + +||+ |+.   +.
T Consensus       167 ~~~~~i~~D~~~~-----~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~  239 (442)
T PLN02206        167 PNFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGD  239 (442)
T ss_pred             CceEEEECCccCh-----hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCC
Confidence            4567777777654     4568999999997321               567899999999999 7 6887 553   32


Q ss_pred             CCC----CC-----CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC-----CCCCCCCCCCceE
Q 025054           66 NVD----AG-----HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA-----QPGATAPPRENIL  127 (258)
Q Consensus        66 ~~~----~~-----~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~-----~~~~~~~~~~~~~  127 (258)
                      ...    +.     .+..+.+.|..+|..+|++++.    .+++++++|++.+||.....-.     .+.......+.+.
T Consensus       240 ~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~  319 (442)
T PLN02206        240 PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLT  319 (442)
T ss_pred             CCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcE
Confidence            110    10     1122245577799999998864    5899999999999997532100     0000012345677


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                      ++|+|++.++|+|++|+++++..+++.+  .++.||++++ +.+|++|+++.+.+.+|.+.++..
T Consensus       320 i~g~G~~~rdfi~V~Dva~ai~~a~e~~--~~g~yNIgs~-~~~sl~Elae~i~~~~g~~~~i~~  381 (442)
T PLN02206        320 VYGDGKQTRSFQFVSDLVEGLMRLMEGE--HVGPFNLGNP-GEFTMLELAKVVQETIDPNAKIEF  381 (442)
T ss_pred             EeCCCCEEEeEEeHHHHHHHHHHHHhcC--CCceEEEcCC-CceeHHHHHHHHHHHhCCCCceee
Confidence            8899999999999999999999998754  4568999974 589999999999999987655543

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.76  E-value=2.4e-17  Score=139.84  Aligned_cols=179  Identities=18%  Similarity=0.239  Sum_probs=134.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHh---------CCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEV---------GNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~---------g~vk~~v   59 (258)
                      .++++.+|+.|.+++.++++  ++|+|||+++...               +.++.+++++|++.         + +++||
T Consensus        51 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~-~~~~i  129 (352)
T PRK10084         51 RYVFEHADICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKN-AFRFH  129 (352)
T ss_pred             ceEEEEecCCCHHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhcccccccccc-ceeEE
Confidence            36788999999999999997  4899999997521               56789999999874         4 77898


Q ss_pred             c-CC---CCCCC--------------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC--CCC
Q 025054           60 P-TE---YGSNV--------------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT--MAQ  115 (258)
Q Consensus        60 ~-S~---~~~~~--------------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~--~~~  115 (258)
                      + |+   |+...              .+..+..|.+.|..+|..+|.+++.    .+++++++|++.+||+....  +..
T Consensus       130 ~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~  209 (352)
T PRK10084        130 HISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIP  209 (352)
T ss_pred             EecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHH
Confidence            7 55   44210              1112334566777899999988864    58999999999999975311  000


Q ss_pred             CC-CCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          116 PG-ATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       116 ~~-~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      .. .....++.+.++|+|++.++++|++|+++++..+++.+ ..++.|++++ ++..|+.|+++.+.+.+|..
T Consensus       210 ~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~-~~~~~yni~~-~~~~s~~~~~~~i~~~~~~~  280 (352)
T PRK10084        210 LVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEG-KAGETYNIGG-HNEKKNLDVVLTICDLLDEI  280 (352)
T ss_pred             HHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-CCCceEEeCC-CCcCcHHHHHHHHHHHhccc
Confidence            00 00122345677888999999999999999999988764 3578999997 45899999999999999864

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.75  E-value=1.7e-17  Score=143.64  Aligned_cols=178  Identities=15%  Similarity=0.206  Sum_probs=127.9

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSN   66 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~   66 (258)
                      +++++.+|+.+.     ++.++|+|||+++...               +.++.+++++|++++ + +||+ |+   ||..
T Consensus       169 ~~~~~~~Di~~~-----~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~  241 (436)
T PLN02166        169 RFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDP  241 (436)
T ss_pred             ceEEEECccccc-----cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCC
Confidence            456666666543     4678999999996321               567899999999998 6 6777 55   3321


Q ss_pred             C----CCC-----CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC-----CCCCCCCCCCceEe
Q 025054           67 V----DAG-----HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA-----QPGATAPPRENILF  128 (258)
Q Consensus        67 ~----~~~-----~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  128 (258)
                      .    ++.     .+..+..+|..+|..+|++++.    .+++++++|++.+||.......     .+......++.+.+
T Consensus       242 ~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v  321 (436)
T PLN02166        242 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTV  321 (436)
T ss_pred             CCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEE
Confidence            1    111     1223445677799999998764    5899999999999997532100     00000123456778


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEec
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYV  193 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~  193 (258)
                      +|+|++.++|+|++|+++++..+++.+  .++.||+++ ++.+|++|+++.+.+.+|.+.++...
T Consensus       322 ~g~g~~~rdfi~V~Dva~ai~~~~~~~--~~giyNIgs-~~~~Si~ela~~I~~~~g~~~~i~~~  383 (436)
T PLN02166        322 YGDGKQTRSFQYVSDLVDGLVALMEGE--HVGPFNLGN-PGEFTMLELAEVVKETIDSSATIEFK  383 (436)
T ss_pred             eCCCCeEEeeEEHHHHHHHHHHHHhcC--CCceEEeCC-CCcEeHHHHHHHHHHHhCCCCCeeeC
Confidence            899999999999999999999998754  456999987 46899999999999999976655443

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.75  E-value=7e-17  Score=136.56  Aligned_cols=181  Identities=16%  Similarity=0.168  Sum_probs=132.8

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCcc---EEEc-CC-
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIK---RFFP-TE-   62 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk---~~v~-S~-   62 (258)
                      .+++++.+|++|.+++.+++++  +|+|||+++...               +.++.+++++|+++| ++   +||+ |+ 
T Consensus        55 ~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~  133 (343)
T TIGR01472        55 ARMKLHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTS  133 (343)
T ss_pred             cceeEEEeccCCHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccH
Confidence            3588999999999999999985  699999998521               346789999999988 74   7887 65 


Q ss_pred             --CCCCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-CCCCCC-----CCCCCC-c
Q 025054           63 --YGSNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-MAQPGA-----TAPPRE-N  125 (258)
Q Consensus        63 --~~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~~~~~~-----~~~~~~-~  125 (258)
                        ||...    .+..+..|.++|..+|..+|.+++.    .+++++..|+...+++.... +.....     ....++ .
T Consensus       134 ~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~  213 (343)
T TIGR01472       134 ELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQE  213 (343)
T ss_pred             HhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCC
Confidence              44321    1222344667888899999998864    47888888887777654211 000000     001121 2


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE  189 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~  189 (258)
                      ..++|+|++.++|+|++|+++++..+++.+  .++.||+++ ++.+|++|+++.+.+.+|++..
T Consensus       214 ~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~--~~~~yni~~-g~~~s~~e~~~~i~~~~g~~~~  274 (343)
T TIGR01472       214 KLYLGNLDAKRDWGHAKDYVEAMWLMLQQD--KPDDYVIAT-GETHSVREFVEVSFEYIGKTLN  274 (343)
T ss_pred             ceeeCCCccccCceeHHHHHHHHHHHHhcC--CCccEEecC-CCceeHHHHHHHHHHHcCCCcc
Confidence            345688999999999999999999998765  346899986 5799999999999999997654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.75  E-value=2.1e-17  Score=136.29  Aligned_cols=174  Identities=17%  Similarity=0.092  Sum_probs=128.3

Q ss_pred             eccCCCHHHHHHhhCCC--cEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---CCCC--
Q 025054           11 QGDLHDHESLVKAIKPV--DVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSNV--   67 (258)
Q Consensus        11 ~~D~~d~~~l~~al~g~--d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~~--   67 (258)
                      .+|+.|.+++.++++++  |+|||+++...               +....+++++|++.+ + +||+ |+.   +...  
T Consensus        33 ~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~  110 (287)
T TIGR01214        33 QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGEGKR  110 (287)
T ss_pred             ccCCCCHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCCCCC
Confidence            36899999999999976  99999997531               346889999999988 6 7887 653   2211  


Q ss_pred             --CCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcC-CCC-CCCCCCCCCCceEeccCCCceeeeeccch
Q 025054           68 --DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLP-TMA-QPGATAPPRENILFYGDGQPKAIFNKEED  143 (258)
Q Consensus        68 --~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~g~g~~~~~~v~~~D  143 (258)
                        .+..+..+..+|..+|..+|++++..+.+++++||+.+||...+ .+. .........+.+.+.+  ++.+++++++|
T Consensus       111 ~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~D  188 (287)
T TIGR01214       111 PYREDDATNPLNVYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKD  188 (287)
T ss_pred             CCCCCCCCCCcchhhHHHHHHHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHH
Confidence              11122234566778999999999998999999999999987531 110 0000012223455554  35688999999


Q ss_pred             HHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054          144 IATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE  189 (258)
Q Consensus       144 ~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~  189 (258)
                      +++++..++..+...++.||++++ +.+|+.|+++.+.+.+|.+..
T Consensus       189 va~a~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~~~  233 (287)
T TIGR01214       189 LARVIAALLQRLARARGVYHLANS-GQCSWYEFAQAIFEEAGADGL  233 (287)
T ss_pred             HHHHHHHHHhhccCCCCeEEEECC-CCcCHHHHHHHHHHHhCcccc
Confidence            999999999876457889999985 599999999999999997643

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.75  E-value=9.6e-17  Score=146.86  Aligned_cols=189  Identities=10%  Similarity=0.066  Sum_probs=137.6

Q ss_pred             CceeEEeccCCCH------HHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCC
Q 025054            5 INCLIAQGDLHDH------ESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~------~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~   65 (258)
                      .+++++.+|+.|+      +.+.++ +++|+|||+++...            +.++.+++++|++.+ +++||+ |+.+.
T Consensus        51 ~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v  128 (657)
T PRK07201         51 DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAV  128 (657)
T ss_pred             CcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEecccc
Confidence            4688999999884      455555 89999999997421            678899999999999 999998 66433


Q ss_pred             C---CC---CC---CCCCCCccchhhHHHHHHHHHh-CCCCeEEEecCcccccCcCCCCC--CC---------CCCCCCC
Q 025054           66 N---VD---AG---HPIEPAKSGYARKAKIRRAIEA-EGIPHTYVSCNCSFGFFLPTMAQ--PG---------ATAPPRE  124 (258)
Q Consensus        66 ~---~~---~~---~~~~~~~~~~~~k~~~e~~l~~-~~~~~t~lr~~~~~~~~~~~~~~--~~---------~~~~~~~  124 (258)
                      .   ..   +.   ....+..+|..+|..+|+++++ .++++|++||+.+||........  .+         .......
T Consensus       129 ~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~  208 (657)
T PRK07201        129 AGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPS  208 (657)
T ss_pred             ccCccCccccccchhhcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCc
Confidence            1   11   00   0112345688899999999985 78999999999999953211000  00         0000011


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc---eeEecCHH
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL---EKIYVTED  196 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~---~~~~~~~~  196 (258)
                      .+.+++.+....++++++|+++++..++..+...++.|+++++ +.+|++|+++.+.+.+|.+.   ....+|..
T Consensus       209 ~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~  282 (657)
T PRK07201        209 WLPMVGPDGGRTNIVPVDYVADALDHLMHKDGRDGQTFHLTDP-KPQRVGDIYNAFARAAGAPPDARLFGFLPGF  282 (657)
T ss_pred             ccccccCCCCeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCC-CCCcHHHHHHHHHHHhCCCccccccccCChH
Confidence            2344555667789999999999999998866556889999985 59999999999999999877   56666653

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.74  E-value=3.4e-17  Score=137.27  Aligned_cols=173  Identities=16%  Similarity=0.154  Sum_probs=124.4

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHh-CCccEEEc-CCCCCC--C
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEV-GNIKRFFP-TEYGSN--V   67 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~-g~vk~~v~-S~~~~~--~   67 (258)
                      +++++.+|++|.+++.++++++|+|||+++...              +.++.+++++|++. + ++|||+ |+.+..  .
T Consensus        57 ~~~~~~~Dl~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~~~~~  135 (322)
T PLN02986         57 RLKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPS-VKRVILTSSTAAVLFR  135 (322)
T ss_pred             ceEEEecCCCCcchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhheecC
Confidence            578999999999999999999999999997421              56678999999985 6 999998 665321  0


Q ss_pred             C----------CCCCC------CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCC--CC-CCCCC
Q 025054           68 D----------AGHPI------EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPG--AT-APPRE  124 (258)
Q Consensus        68 ~----------~~~~~------~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~--~~-~~~~~  124 (258)
                      .          +....      .+...|..+|..+|.++.+    .+++++++||+.+||+.........  .. ....+
T Consensus       136 ~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g  215 (322)
T PLN02986        136 QPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFING  215 (322)
T ss_pred             CccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcC
Confidence            0          00000      1234577799999987654    6899999999999997643210000  00 00011


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                      . .++  +++.++|||++|+|++++.+++.+.. ++.|+++|  +.+|++|+++.+.+.++
T Consensus       216 ~-~~~--~~~~~~~v~v~Dva~a~~~al~~~~~-~~~yni~~--~~~s~~e~~~~i~~~~~  270 (322)
T PLN02986        216 K-NLF--NNRFYRFVDVRDVALAHIKALETPSA-NGRYIIDG--PIMSVNDIIDILRELFP  270 (322)
T ss_pred             C-CCC--CCcCcceeEHHHHHHHHHHHhcCccc-CCcEEEec--CCCCHHHHHHHHHHHCC
Confidence            1 112  24567899999999999999988753 45789864  48999999999999987

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.74  E-value=2.4e-16  Score=131.12  Aligned_cols=179  Identities=16%  Similarity=0.112  Sum_probs=127.2

Q ss_pred             EeccCCCHHHHHHhhC--CCcEEEEccCccc----------------hhchHHHHHHHHHhCCccEEEc-CCC---CCCC
Q 025054           10 AQGDLHDHESLVKAIK--PVDVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSNV   67 (258)
Q Consensus        10 ~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~~   67 (258)
                      ..+|+.|.+++.++++  ++|+|||+++...                +.++.+++++|++.+ +++||+ |+.   +...
T Consensus        31 ~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~  109 (306)
T PLN02725         31 KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFA  109 (306)
T ss_pred             ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCC
Confidence            3689999999999887  5799999996410                456889999999999 999998 653   3211


Q ss_pred             CC----CC----CCCCCcc-chhhHHHHHHHHH----hCCCCeEEEecCcccccCcCCCCCC-C----CC-----C-CCC
Q 025054           68 DA----GH----PIEPAKS-GYARKAKIRRAIE----AEGIPHTYVSCNCSFGFFLPTMAQP-G----AT-----A-PPR  123 (258)
Q Consensus        68 ~~----~~----~~~~~~~-~~~~k~~~e~~l~----~~~~~~t~lr~~~~~~~~~~~~~~~-~----~~-----~-~~~  123 (258)
                      ..    ..    +..|..+ |..+|..+|++++    ..+++++++||+.+||......... .    ..     . ...
T Consensus       110 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~  189 (306)
T PLN02725        110 PQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANG  189 (306)
T ss_pred             CCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcC
Confidence            10    00    1122233 6679999997664    3689999999999999753210000 0    00     0 112


Q ss_pred             CceEe-ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          124 ENILF-YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       124 ~~~~~-~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      ..+.+ +|+|++.++++|++|+++++..+++... .++.||+++ ++.+|+.|+++.+.+.+|.+.++.
T Consensus       190 ~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~-~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~~~  256 (306)
T PLN02725        190 APEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS-GAEHVNVGS-GDEVTIKELAELVKEVVGFEGELV  256 (306)
T ss_pred             CCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc-cCcceEeCC-CCcccHHHHHHHHHHHhCCCCcee
Confidence            23344 6888999999999999999999998653 346678986 469999999999999998765543

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.74  E-value=2.1e-17  Score=129.70  Aligned_cols=184  Identities=19%  Similarity=0.246  Sum_probs=145.7

Q ss_pred             cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---
Q 025054            4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---   62 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---   62 (258)
                      +++-+++++|+.+...+...|.  ..|.|+|.++...               +-.+..|+++++.+|++++||+ |+   
T Consensus        56 ~p~ykfv~~di~~~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeV  135 (331)
T KOG0747|consen   56 SPNYKFVEGDIADADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEV  135 (331)
T ss_pred             CCCceEeeccccchHHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccce
Confidence            4678999999999888888776  6899999997532               5678899999999988999998 64   


Q ss_pred             CCCCCC-----CCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC---CCCCCCCCCCCCceEecc
Q 025054           63 YGSNVD-----AGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT---MAQPGATAPPRENILFYG  130 (258)
Q Consensus        63 ~~~~~~-----~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g  130 (258)
                      ||....     +.+...|.+||.++|+++|..+++    .+++++++|.+.+||+-...   +..+.......++.++.|
T Consensus       136 YGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g  215 (331)
T KOG0747|consen  136 YGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHG  215 (331)
T ss_pred             ecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceec
Confidence            553221     344567899999999999999976    58999999999999964321   110001113355788899


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE  189 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~  189 (258)
                      +|.+.++|++++|+++++-.+++.. ..|++|||+. .++++..|+++.+.+..+....
T Consensus       216 ~g~~~rs~l~veD~~ea~~~v~~Kg-~~geIYNIgt-d~e~~~~~l~k~i~eli~~~~~  272 (331)
T KOG0747|consen  216 DGLQTRSYLYVEDVSEAFKAVLEKG-ELGEIYNIGT-DDEMRVIDLAKDICELFEKRLP  272 (331)
T ss_pred             CcccceeeEeHHHHHHHHHHHHhcC-CccceeeccC-cchhhHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999998874 4799999996 5799999999999988775443

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.74  E-value=3.8e-16  Score=130.93  Aligned_cols=187  Identities=20%  Similarity=0.256  Sum_probs=135.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---C
Q 025054            6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---G   64 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~   64 (258)
                      +++++.+|+.|.+++.++++  ++|+|||+++...               +....+++++|++.+ ++++|+ |+.   +
T Consensus        48 ~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g  126 (328)
T TIGR01179        48 RVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYG  126 (328)
T ss_pred             ceEEEECCCCCHHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcC
Confidence            46788999999999999987  6899999997421               456789999999998 999998 543   2


Q ss_pred             CCC----CCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCC---CCC---------CC-C
Q 025054           65 SNV----DAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQP---GAT---------AP-P  122 (258)
Q Consensus        65 ~~~----~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~---~~~---------~~-~  122 (258)
                      ...    ++..+..+..+|..+|..+|.+++.     .+++++++||+.+||.....+...   ...         .. .
T Consensus       127 ~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (328)
T TIGR01179       127 EPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGK  206 (328)
T ss_pred             CCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhC
Confidence            111    1112223456777899999988864     689999999999999753221000   000         00 1


Q ss_pred             CCceEec------cCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          123 RENILFY------GDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       123 ~~~~~~~------g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      ...+.++      ++|+++++||+++|+++++..++...  ...++.|+++++ +.+|++|+++.+.+.+|++.++...+
T Consensus       207 ~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~-~~~s~~ei~~~~~~~~g~~~~~~~~~  285 (328)
T TIGR01179       207 RDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYG-QGFSVLEVIEAFKKVSGVDFPVELAP  285 (328)
T ss_pred             CCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCC-CcccHHHHHHHHHHHhCCCcceEeCC
Confidence            1122222      35678899999999999999998753  235789999874 58999999999999999887765443

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.74  E-value=3e-16  Score=133.17  Aligned_cols=187  Identities=20%  Similarity=0.204  Sum_probs=134.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC--
Q 025054            6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS--   65 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~--   65 (258)
                      +++++.+|++|++.+.++++  ++|+|||+++...               +..+.+++++|++.+ +++||+ |+.+.  
T Consensus        59 ~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg  137 (352)
T PLN02240         59 NLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYG  137 (352)
T ss_pred             cceEEecCcCCHHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhC
Confidence            57899999999999999886  6899999987421               456789999999998 999998 66322  


Q ss_pred             -CC----CCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCC-C-C-C--------CC-CC-C
Q 025054           66 -NV----DAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMA-Q-P-G--------AT-AP-P  122 (258)
Q Consensus        66 -~~----~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~-~-~-~--------~~-~~-~  122 (258)
                       ..    .+..+..+..+|..+|..+|++++.     .+++.+++|++.+||...+... . . .        .. .. .
T Consensus       138 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~  217 (352)
T PLN02240        138 QPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVG  217 (352)
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhC
Confidence             11    1122334556777899999999863     3688999999888885322100 0 0 0        00 00 1


Q ss_pred             -CCceEecc------CCCceeeeeccchHHHHHHHHhcCC----CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          123 -RENILFYG------DGQPKAIFNKEEDIATYTIKAVDDP----RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       123 -~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~----~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                       ...+.++|      +|.+.++|||++|+|++++.++...    ...++.||+++ ++.+|++|+++.+.+.+|.+.++.
T Consensus       218 ~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~-~~~~s~~el~~~i~~~~g~~~~~~  296 (352)
T PLN02240        218 RRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGT-GKGTSVLEMVAAFEKASGKKIPLK  296 (352)
T ss_pred             CCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccC-CCcEeHHHHHHHHHHHhCCCCCce
Confidence             11344444      6788999999999999998887642    23468999987 469999999999999999877665


Q ss_pred             ecC
Q 025054          192 YVT  194 (258)
Q Consensus       192 ~~~  194 (258)
                      ..+
T Consensus       297 ~~~  299 (352)
T PLN02240        297 LAP  299 (352)
T ss_pred             eCC
Confidence            543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.73  E-value=1.2e-16  Score=134.20  Aligned_cols=186  Identities=18%  Similarity=0.205  Sum_probs=132.8

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CC---CCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSNV   67 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~~   67 (258)
                      .+++++.+|++|.+++.++++++|+|||+++...             +.+..+++++|++++ ++++|+ |+   ++...
T Consensus        43 ~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~  121 (328)
T TIGR03466        43 LDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRG  121 (328)
T ss_pred             CCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCC
Confidence            4788999999999999999999999999986421             567789999999998 999998 65   33211


Q ss_pred             -----CCCCCCCC---CccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC--CCCCCCceEeccCCC
Q 025054           68 -----DAGHPIEP---AKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA--TAPPRENILFYGDGQ  133 (258)
Q Consensus        68 -----~~~~~~~~---~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~g~  133 (258)
                           ++..+..+   ..+|..+|..+|+.+++    .+++++++||+.+||.........+.  .....+......  +
T Consensus       122 ~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~--~  199 (328)
T TIGR03466       122 DGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV--D  199 (328)
T ss_pred             CCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee--C
Confidence                 11111111   23566799999988875    58999999999999975332111000  000011122222  2


Q ss_pred             ceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHH
Q 025054          134 PKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTED  196 (258)
Q Consensus       134 ~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~  196 (258)
                      ...+++|++|+|+++..+++.+. .++.|+++  ++.+|++|+++.+.+.+|++.....+|..
T Consensus       200 ~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~  259 (328)
T TIGR03466       200 TGLNLVHVDDVAEGHLLALERGR-IGERYILG--GENLTLKQILDKLAEITGRPAPRVKLPRW  259 (328)
T ss_pred             CCcceEEHHHHHHHHHHHHhCCC-CCceEEec--CCCcCHHHHHHHHHHHhCCCCCCCcCCHH
Confidence            34679999999999999998753 56777775  46899999999999999988777777754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02996 fatty acyl-CoA reductase

Probab=99.73  E-value=2.7e-16  Score=138.19  Aligned_cols=179  Identities=14%  Similarity=0.114  Sum_probs=132.7

Q ss_pred             CceeEEeccCC-------CHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCC-
Q 025054            5 INCLIAQGDLH-------DHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEY-   63 (258)
Q Consensus         5 ~gv~~~~~D~~-------d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~-   63 (258)
                      ..++++.||+.       |.+.+.++++++|+|||+++...            +.++.+++++|++++++++||+ |+. 
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~  163 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY  163 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence            56899999997       55567788899999999998532            6788999999998633999998 652 


Q ss_pred             --CCCCC---C-C-C--------------------------------------------------CCCCCccchhhHHHH
Q 025054           64 --GSNVD---A-G-H--------------------------------------------------PIEPAKSGYARKAKI   86 (258)
Q Consensus        64 --~~~~~---~-~-~--------------------------------------------------~~~~~~~~~~~k~~~   86 (258)
                        |....   + . .                                                  ...++++|..+|+.+
T Consensus       164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a  243 (491)
T PLN02996        164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG  243 (491)
T ss_pred             EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence              32110   0 0 0                                                  011245678899999


Q ss_pred             HHHHHh--CCCCeEEEecCcccccCcCCCCCCCCCC-----------CCCCc-eEeccCCCceeeeeccchHHHHHHHHh
Q 025054           87 RRAIEA--EGIPHTYVSCNCSFGFFLPTMAQPGATA-----------PPREN-ILFYGDGQPKAIFNKEEDIATYTIKAV  152 (258)
Q Consensus        87 e~~l~~--~~~~~t~lr~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~g~g~~~~~~v~~~D~a~~~~~~l  152 (258)
                      |+++++  .+++++++||+.++|..-..+  +++..           ...+. ..++|+|++.+++|+++|+++++..++
T Consensus       244 E~lv~~~~~~lpv~i~RP~~V~G~~~~p~--~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~  321 (491)
T PLN02996        244 EMLLGNFKENLPLVIIRPTMITSTYKEPF--PGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM  321 (491)
T ss_pred             HHHHHHhcCCCCEEEECCCEeccCCcCCC--CCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence            999987  589999999999999654322  12210           12233 357899999999999999999999988


Q ss_pred             cCC--C-CCCceEEEcCCC--CccCHHHHHHHHHHHhCC
Q 025054          153 DDP--R-TLNKTLYLRPPK--NIYSFKELVALWEKKIGK  186 (258)
Q Consensus       153 ~~~--~-~~~~~~~l~g~~--~~~t~~e~~~~~~~~~g~  186 (258)
                      ...  . ..+++||+++ +  ..+|+.|+++.+.+..+.
T Consensus       322 ~~~~~~~~~~~vYNi~s-~~~~~~s~~ei~~~~~~~~~~  359 (491)
T PLN02996        322 AAHAGGQGSEIIYHVGS-SLKNPVKFSNLHDFAYRYFSK  359 (491)
T ss_pred             HHhhccCCCCcEEEecC-CCCCcccHHHHHHHHHHHhhh
Confidence            753  1 2467899985 4  689999999999998874

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.72  E-value=1.3e-16  Score=132.23  Aligned_cols=171  Identities=16%  Similarity=0.169  Sum_probs=120.7

Q ss_pred             eccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCCC---
Q 025054           11 QGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSN---   66 (258)
Q Consensus        11 ~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~---   66 (258)
                      .+|++|.+.+.++++  ++|+|||+++...               +.++.+++++|++.| + ++|+ |+   |+..   
T Consensus        37 ~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~~~~  114 (299)
T PRK09987         37 CGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGTGDI  114 (299)
T ss_pred             cCCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCCCCC
Confidence            579999999999998  5899999997532               456789999999999 6 5777 65   3221   


Q ss_pred             -CCCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCC-CCCCCCCCCceEeccC--CCceeeeeccc
Q 025054           67 -VDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQ-PGATAPPRENILFYGD--GQPKAIFNKEE  142 (258)
Q Consensus        67 -~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~--g~~~~~~v~~~  142 (258)
                       ..+..+..|.++|..+|..+|++++....+++++|++++||+....+.. +......++.+.++++  |+....+...+
T Consensus       115 p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d  194 (299)
T PRK09987        115 PWQETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLAD  194 (299)
T ss_pred             CcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHH
Confidence             1122233466778889999999999877789999999999964322110 0001122345777776  55444455566


Q ss_pred             hHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          143 DIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       143 D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                      |+++++..++..+. .+++||++++ +.+|+.|+++.+.+..+
T Consensus       195 ~~~~~~~~~~~~~~-~~giyni~~~-~~~s~~e~~~~i~~~~~  235 (299)
T PRK09987        195 CTAHAIRVALNKPE-VAGLYHLVAS-GTTTWHDYAALVFEEAR  235 (299)
T ss_pred             HHHHHHHHhhccCC-CCCeEEeeCC-CCccHHHHHHHHHHHHH
Confidence            67777777765543 3469999984 68999999999988643

>PRK05865 hypothetical protein; Provisional

Probab=99.72  E-value=9.4e-17  Score=146.99  Aligned_cols=154  Identities=16%  Similarity=0.215  Sum_probs=122.8

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKS   78 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~   78 (258)
                      +++++.+|++|.+++.++++++|+|||+++...      +.++.+++++|+++| +++||+ |+..              
T Consensus        41 ~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~--------------  105 (854)
T PRK05865         41 SADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDHINIDGTANVLKAMAETG-TGRIVFTSSGH--------------  105 (854)
T ss_pred             CceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH--------------
Confidence            578899999999999999999999999997532      677899999999999 999998 6531              


Q ss_pred             chhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCC
Q 025054           79 GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTL  158 (258)
Q Consensus        79 ~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~  158 (258)
                          |..+|+++++.+++++++||+++||...+.+...    .....+...|+++..++|||++|+++++..++..+...
T Consensus       106 ----K~aaE~ll~~~gl~~vILRp~~VYGP~~~~~i~~----ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~  177 (854)
T PRK05865        106 ----QPRVEQMLADCGLEWVAVRCALIFGRNVDNWVQR----LFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVID  177 (854)
T ss_pred             ----HHHHHHHHHHcCCCEEEEEeceEeCCChHHHHHH----HhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcC
Confidence                8899999999999999999999999753321110    00111222345566789999999999999998765446


Q ss_pred             CceEEEcCCCCccCHHHHHHHHHHH
Q 025054          159 NKTLYLRPPKNIYSFKELVALWEKK  183 (258)
Q Consensus       159 ~~~~~l~g~~~~~t~~e~~~~~~~~  183 (258)
                      ++.||++++ +.+|++|+++.+.+.
T Consensus       178 ggvyNIgsg-~~~Si~EIae~l~~~  201 (854)
T PRK05865        178 SGPVNLAAP-GELTFRRIAAALGRP  201 (854)
T ss_pred             CCeEEEECC-CcccHHHHHHHHhhh
Confidence            789999984 589999999998874

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.72  E-value=1.2e-16  Score=133.83  Aligned_cols=174  Identities=14%  Similarity=0.144  Sum_probs=123.8

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHh-CCccEEEc-CCCC-----
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEV-GNIKRFFP-TEYG-----   64 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~-g~vk~~v~-S~~~-----   64 (258)
                      +++++.+|+.|++.+.++++++|+|||+++...              +.++.+++++|++. + ++|||+ |+.+     
T Consensus        56 ~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~  134 (322)
T PLN02662         56 RLHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYN  134 (322)
T ss_pred             ceEEEeccccCcchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCC
Confidence            578999999999999999999999999997421              56788999999987 7 999998 6532     


Q ss_pred             CCC-------CCCCCCCC------CccchhhHHHHHHHHH----hCCCCeEEEecCcccccCcCCCCCC--CC-CCCCCC
Q 025054           65 SNV-------DAGHPIEP------AKSGYARKAKIRRAIE----AEGIPHTYVSCNCSFGFFLPTMAQP--GA-TAPPRE  124 (258)
Q Consensus        65 ~~~-------~~~~~~~~------~~~~~~~k~~~e~~l~----~~~~~~t~lr~~~~~~~~~~~~~~~--~~-~~~~~~  124 (258)
                      ...       ++..+..|      ..+|..+|..+|++++    +.+++++++||+.+||+........  .. .....+
T Consensus       135 ~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~  214 (322)
T PLN02662        135 GKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLING  214 (322)
T ss_pred             CcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcC
Confidence            111       00000111      1356679999998875    3689999999999999764321000  00 000001


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      . ...  +++.++|+|++|+|+++..+++.+.. ++.|++.|  +.+|++|+++.+.+.++.
T Consensus       215 ~-~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~g--~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        215 A-QTF--PNASYRWVDVRDVANAHIQAFEIPSA-SGRYCLVE--RVVHYSEVVKILHELYPT  270 (322)
T ss_pred             C-ccC--CCCCcCeEEHHHHHHHHHHHhcCcCc-CCcEEEeC--CCCCHHHHHHHHHHHCCC
Confidence            1 111  34678999999999999999987643 44688874  589999999999998763

>PLN02650 dihydroflavonol-4-reductase

Probab=99.72  E-value=2.2e-16  Score=134.00  Aligned_cols=176  Identities=15%  Similarity=0.159  Sum_probs=122.0

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC---
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV---   67 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~---   67 (258)
                      .++++.+|+.|.+.+.++++++|+|||+++...              +.++.+++++|++.+++++||+ |+.+...   
T Consensus        57 ~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~  136 (351)
T PLN02650         57 RLTLWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEE  136 (351)
T ss_pred             ceEEEEecCCChhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCC
Confidence            367899999999999999999999999997421              4577899999998765789998 6643211   


Q ss_pred             ------CCCC---------CCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCC---CCCCCc
Q 025054           68 ------DAGH---------PIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGAT---APPREN  125 (258)
Q Consensus        68 ------~~~~---------~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~---~~~~~~  125 (258)
                            ++..         ...+..+|..+|..+|.+++.    .+++++++||+.+||+...........   ....+.
T Consensus       137 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~  216 (351)
T PLN02650        137 HQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN  216 (351)
T ss_pred             CCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCC
Confidence                  1100         001224677899999987754    589999999999999764321111100   000011


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                      ...++. ...++|+|++|+++++..+++.+. .++.| +++ +..+|++|+++.+.+.++
T Consensus       217 ~~~~~~-~~~r~~v~V~Dva~a~~~~l~~~~-~~~~~-i~~-~~~~s~~el~~~i~~~~~  272 (351)
T PLN02650        217 EAHYSI-IKQGQFVHLDDLCNAHIFLFEHPA-AEGRY-ICS-SHDATIHDLAKMLREKYP  272 (351)
T ss_pred             ccccCc-CCCcceeeHHHHHHHHHHHhcCcC-cCceE-Eec-CCCcCHHHHHHHHHHhCc
Confidence            111222 234789999999999999998764 33466 444 458999999999999876

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.72  E-value=1.4e-16  Score=122.79  Aligned_cols=138  Identities=25%  Similarity=0.284  Sum_probs=108.1

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCC-----CCC
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHP-----IEP   75 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~-----~~~   75 (258)
                      ..+++++.+|+.|++++.++++|+|+||++++...  ....++++++++++| ++|+|+ |+.+........     .+.
T Consensus        38 ~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~  116 (183)
T PF13460_consen   38 SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPI  116 (183)
T ss_dssp             CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGG
T ss_pred             ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccccccccccccccc-cccceeeeccccCCCCCcccccccccc
Confidence            36899999999999999999999999999998643  677899999999999 999998 877765432210     001


Q ss_pred             CccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcC
Q 025054           76 AKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDD  154 (258)
Q Consensus        76 ~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~  154 (258)
                      ...|+..|..+|+.+++++++||++||+++|++....           ..+ +...+....++|+.+|+|++++.++++
T Consensus       117 ~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~~-----------~~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  117 FPEYARDKREAEEALRESGLNWTIVRPGWIYGNPSRS-----------YRL-IKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             GHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSSS-----------EEE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             hhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCcc-----------eeE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            1256778999999999999999999999999985221           011 111345667999999999999998864

...

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.71  E-value=1.9e-16  Score=132.25  Aligned_cols=179  Identities=12%  Similarity=0.090  Sum_probs=126.6

Q ss_pred             eEEeccCCCHHHHHHhh----CCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCCC---
Q 025054            8 LIAQGDLHDHESLVKAI----KPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN---   66 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al----~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~---   66 (258)
                      ..+.+|+++.+.+..+.    .++|+|||+++...             +.++.+++++|++.+ + +||+ |+.+..   
T Consensus        44 ~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~  121 (314)
T TIGR02197        44 LVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDG  121 (314)
T ss_pred             eeeeccCcchhHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCC
Confidence            45667888877777665    48999999997531             567899999999998 7 6887 653221   


Q ss_pred             CC---C-CCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCC-C----C--CCCCCCceEe-
Q 025054           67 VD---A-GHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQP-G----A--TAPPRENILF-  128 (258)
Q Consensus        67 ~~---~-~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~-~----~--~~~~~~~~~~-  128 (258)
                      ..   + .....|.++|..+|..+|.++++      .+++++++|++.+||......... .    +  ....+..+.+ 
T Consensus       122 ~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (314)
T TIGR02197       122 EAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLF  201 (314)
T ss_pred             CCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEe
Confidence            11   1 11122456677799999998864      257899999999999653210000 0    0  0011222333 


Q ss_pred             -----ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          129 -----YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       129 -----~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                           +++|++.++++|++|+++++..++...  .+++||++++ +.+|++|+++.+.+.+|.+.++.
T Consensus       202 ~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~~--~~~~yni~~~-~~~s~~e~~~~i~~~~g~~~~~~  266 (314)
T TIGR02197       202 KSSEGFKDGEQLRDFVYVKDVVDVNLWLLENG--VSGIFNLGTG-RARSFNDLADAVFKALGKDEKIE  266 (314)
T ss_pred             cCccccCCCCceeeeEEHHHHHHHHHHHHhcc--cCceEEcCCC-CCccHHHHHHHHHHHhCCCCcce
Confidence                 356788899999999999999999873  6779999985 69999999999999999765433

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.71  E-value=2e-16  Score=133.53  Aligned_cols=178  Identities=17%  Similarity=0.126  Sum_probs=123.1

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCC---CC
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS---NV   67 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~---~~   67 (258)
                      +++++.+|++|.+++.++++++|+|||+++...              +.+..+++++|.+.+++++||+ |+...   ..
T Consensus        60 ~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~  139 (338)
T PLN00198         60 DLKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINK  139 (338)
T ss_pred             ceEEEEcCCCChHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccC
Confidence            478999999999999999999999999997421              4567889999988633899998 65321   10


Q ss_pred             --------CCC---------CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC-CCC-C-C-CCC
Q 025054           68 --------DAG---------HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA-QPG-A-T-APP  122 (258)
Q Consensus        68 --------~~~---------~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~-~~~-~-~-~~~  122 (258)
                              .+.         ...+|..+|..+|..+|.+++.    .+++++++||+.+||+...... ... . . ...
T Consensus       140 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~  219 (338)
T PLN00198        140 LSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLIT  219 (338)
T ss_pred             CCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHc
Confidence                    000         0123455688899999987764    5899999999999997642110 000 0 0 011


Q ss_pred             CCceEecc-CCC----ceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          123 RENILFYG-DGQ----PKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       123 ~~~~~~~g-~g~----~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      ...+.+.| ++.    ..++|+|++|++++++.+++.+. .++.|+.+  +..+|++|+++.+.+.++.
T Consensus       220 ~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~-~~~~~~~~--~~~~s~~el~~~i~~~~~~  285 (338)
T PLN00198        220 GNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKES-ASGRYICC--AANTSVPELAKFLIKRYPQ  285 (338)
T ss_pred             CCccccccccccccccCCcceeEHHHHHHHHHHHhhCcC-cCCcEEEe--cCCCCHHHHHHHHHHHCCC
Confidence            12233333 222    23699999999999999988753 33456544  3578999999999998763

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.71  E-value=1.4e-17  Score=133.28  Aligned_cols=159  Identities=26%  Similarity=0.331  Sum_probs=122.6

Q ss_pred             ceeEEeccCCCHHHHHHhhCCC--cEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---C
Q 025054            6 NCLIAQGDLHDHESLVKAIKPV--DVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---G   64 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~--d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~   64 (258)
                      +++++.+|+.|.+.+.+++++.  |+|||+++...               +...++++++|++.+ +++||+ |+.   +
T Consensus        43 ~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~  121 (236)
T PF01370_consen   43 NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYG  121 (236)
T ss_dssp             TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGT
T ss_pred             eEEEEEeeccccccccccccccCceEEEEeecccccccccccccccccccccccccccccccccc-cccccccccccccc
Confidence            7889999999999999999976  99999998630               678899999999999 899997 543   3


Q ss_pred             CCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC------CCCCCCceEecc
Q 025054           65 SNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA------TAPPRENILFYG  130 (258)
Q Consensus        65 ~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g  130 (258)
                      ...    ++..+..+..+|..+|...|+++++    .+++++++||+.+||+..........      .....+++.+++
T Consensus       122 ~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (236)
T PF01370_consen  122 DPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPG  201 (236)
T ss_dssp             SSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEES
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccC
Confidence            221    1122223556777899999999875    48999999999999987110000000      012234588899


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR  165 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~  165 (258)
                      +|++.++++|++|+|+++..+++++...++.||++
T Consensus       202 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  202 DGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             TSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred             CCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999999999999986679999984

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.70  E-value=1.2e-15  Score=127.34  Aligned_cols=181  Identities=20%  Similarity=0.225  Sum_probs=135.0

Q ss_pred             ceeEEeccCCCHHHHHHhhCCC-cEEEEccCccc----------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKPV-DVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV   67 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~-d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~   67 (258)
                      +++++.+|++|.+.+.++++++ |+|||+++...                +.++++++++|++++ ++++|+ |+.+...
T Consensus        43 ~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~  121 (314)
T COG0451          43 GVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVY  121 (314)
T ss_pred             ccceeeecccchHHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceEC
Confidence            5788899999998888899988 99999997431                567899999999988 999998 5532111


Q ss_pred             --------CCC-CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCC-CCCCC---C--CCCCC-ceE
Q 025054           68 --------DAG-HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTM-AQPGA---T--APPRE-NIL  127 (258)
Q Consensus        68 --------~~~-~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~-~~~~~---~--~~~~~-~~~  127 (258)
                              .+. .+..|.++|..+|..+|+++++    .+++++++||+.+||...... .....   .  ..... ...
T Consensus       122 ~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (314)
T COG0451         122 GDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIV  201 (314)
T ss_pred             CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcce
Confidence                    111 1223334577799999999976    369999999999999664321 00000   0  11122 256


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCC-ccCHHHHHHHHHHHhCCccee
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKN-IYSFKELVALWEKKIGKTLEK  190 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~-~~t~~e~~~~~~~~~g~~~~~  190 (258)
                      +.++++..+++++++|+++++..+++++...  .|++++ +. .+|++|+++.+.+.+|.+...
T Consensus       202 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~~ni~~-~~~~~~~~e~~~~~~~~~~~~~~~  262 (314)
T COG0451         202 IGGDGSQTRDFVYVDDVADALLLALENPDGG--VFNIGS-GTAEITVRELAEAVAEAVGSKAPL  262 (314)
T ss_pred             EeCCCceeEeeEeHHHHHHHHHHHHhCCCCc--EEEeCC-CCCcEEHHHHHHHHHHHhCCCCcc
Confidence            6677888899999999999999999987433  889986 44 799999999999999987663

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.69  E-value=3.8e-16  Score=130.94  Aligned_cols=169  Identities=15%  Similarity=0.143  Sum_probs=125.3

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVD   68 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~   68 (258)
                      .+++++.+|++|.+.+.++++++|+|||+++...               +.++.+++++|++++ +++||+ |+...   
T Consensus        53 ~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~---  128 (324)
T TIGR03589        53 PCLRFFIGDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKA---  128 (324)
T ss_pred             CcEEEEEccCCCHHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCC---
Confidence            3588999999999999999999999999997521               457889999999999 999998 66422   


Q ss_pred             CCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC-ceEeccCCCceeeeec
Q 025054           69 AGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE-NILFYGDGQPKAIFNK  140 (258)
Q Consensus        69 ~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~g~~~~~~v~  140 (258)
                          ..|..+|..+|..+|.+++.       .|++++++|||.++|+....+..+........ .+++. ++++.++|++
T Consensus       129 ----~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~  203 (324)
T TIGR03589       129 ----ANPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPRMTRFWIT  203 (324)
T ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCCceEeeEE
Confidence                12356788899999998753       58999999999999963211100000001121 24444 5778889999


Q ss_pred             cchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          141 EEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       141 ~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                      ++|+++++..+++... .++.| +. .+..+|+.|+++.+.+..+
T Consensus       204 v~D~a~a~~~al~~~~-~~~~~-~~-~~~~~sv~el~~~i~~~~~  245 (324)
T TIGR03589       204 LEQGVNFVLKSLERML-GGEIF-VP-KIPSMKITDLAEAMAPECP  245 (324)
T ss_pred             HHHHHHHHHHHHhhCC-CCCEE-cc-CCCcEEHHHHHHHHHhhCC
Confidence            9999999999998642 35556 43 2557999999999999754

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.68  E-value=1e-15  Score=127.55  Aligned_cols=156  Identities=12%  Similarity=0.050  Sum_probs=111.6

Q ss_pred             CCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CC---CCCCC----CCCCCCCCCccchhhHH
Q 025054           26 PVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSNV----DAGHPIEPAKSGYARKA   84 (258)
Q Consensus        26 g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~~----~~~~~~~~~~~~~~~k~   84 (258)
                      ++|+|||+++...             +.++.+++++|++.+ + +||+ |+   |+...    ++..+..|.++|..+|.
T Consensus        68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~  145 (308)
T PRK11150         68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKF  145 (308)
T ss_pred             CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHH
Confidence            6899999986311             566789999999998 7 4887 65   33221    11122345567888999


Q ss_pred             HHHHHHHh----CCCCeEEEecCcccccCcCCCCC-CCC------CCCCCCceEec-cCCCceeeeeccchHHHHHHHHh
Q 025054           85 KIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-PGA------TAPPRENILFY-GDGQPKAIFNKEEDIATYTIKAV  152 (258)
Q Consensus        85 ~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~-g~g~~~~~~v~~~D~a~~~~~~l  152 (258)
                      .+|+++++    .+++++++|++.+||........ ...      ....++...++ |+++.+++|+|++|+++++..++
T Consensus       146 ~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~  225 (308)
T PRK11150        146 LFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFW  225 (308)
T ss_pred             HHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHH
Confidence            99988775    58999999999999975322100 000      01122223333 66678899999999999999988


Q ss_pred             cCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          153 DDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       153 ~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      +..  .++.||+++ +..+|+.|+++.+.+.+|.
T Consensus       226 ~~~--~~~~yni~~-~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        226 ENG--VSGIFNCGT-GRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             hcC--CCCeEEcCC-CCceeHHHHHHHHHHHhCC
Confidence            764  467999987 5689999999999999985

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.67  E-value=1.1e-15  Score=122.44  Aligned_cols=174  Identities=18%  Similarity=0.179  Sum_probs=131.4

Q ss_pred             ccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCC----C
Q 025054           12 GDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGS----N   66 (258)
Q Consensus        12 ~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~----~   66 (258)
                      .|++|++.+.+.++.  .|+|||+++...               ..+..++++||.+.| .+ +|+ |+   |..    .
T Consensus        34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~-lVhiSTDyVFDG~~~~~  111 (281)
T COG1091          34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG-AR-LVHISTDYVFDGEKGGP  111 (281)
T ss_pred             ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC-Ce-EEEeecceEecCCCCCC
Confidence            589999999999984  599999999764               567799999999999 54 555 64   221    1


Q ss_pred             CCCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCC-CCCCCCceEeccCCCceeeeeccchHH
Q 025054           67 VDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGA-TAPPRENILFYGDGQPKAIFNKEEDIA  145 (258)
Q Consensus        67 ~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~g~~~~~~v~~~D~a  145 (258)
                      ..+.....|.+-|..+|...|+.+++.+-..+++|.+|+|+.....+..... ....++.+.+.  .++..++++..|+|
T Consensus       112 Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv--~Dq~gsPt~~~dlA  189 (281)
T COG1091         112 YKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVV--DDQYGSPTYTEDLA  189 (281)
T ss_pred             CCCCCCCCChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEE--CCeeeCCccHHHHH
Confidence            2233344566667779999999999999999999999999976543321111 11223345544  36888899999999


Q ss_pred             HHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          146 TYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       146 ~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      +++..++.... .+++|++.+.+ .+|+-|+++.+.+..|.+....
T Consensus       190 ~~i~~ll~~~~-~~~~yH~~~~g-~~Swydfa~~I~~~~~~~~~v~  233 (281)
T COG1091         190 DAILELLEKEK-EGGVYHLVNSG-ECSWYEFAKAIFEEAGVDGEVI  233 (281)
T ss_pred             HHHHHHHhccc-cCcEEEEeCCC-cccHHHHHHHHHHHhCCCcccc
Confidence            99999887653 44599999976 7999999999999999766444

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.67  E-value=3.3e-15  Score=126.19  Aligned_cols=178  Identities=13%  Similarity=0.114  Sum_probs=128.6

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCcc-----EEEc-CC
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIK-----RFFP-TE   62 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk-----~~v~-S~   62 (258)
                      +++++.+|+.|.+++.+++++  +|+|||+++...               +.++.+++++|++.+ ++     +||+ |+
T Consensus        61 ~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss  139 (340)
T PLN02653         61 RMKLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGS  139 (340)
T ss_pred             ceEEEEecCCCHHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEecc
Confidence            478899999999999999984  699999998521               456799999999988 75     8887 54


Q ss_pred             ---CCCCC---CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-CCCCCC-----CCCCCCce
Q 025054           63 ---YGSNV---DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-MAQPGA-----TAPPRENI  126 (258)
Q Consensus        63 ---~~~~~---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~~~~~~-----~~~~~~~~  126 (258)
                         ||...   .+..+..|.++|..+|..+|.+++.    .++.++..|+...+++.... +.....     ........
T Consensus       140 ~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~  219 (340)
T PLN02653        140 SEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQK  219 (340)
T ss_pred             HHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCC
Confidence               44321   1222334566788899999998854    47777777776666643211 100000     00012223


Q ss_pred             -EeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                       .+.|+|++.++|+|++|++++++.+++.+  .++.||+++ ++.+|++|+++.+.+.+|.+
T Consensus       220 ~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~--~~~~yni~~-g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        220 KLFLGNLDASRDWGFAGDYVEAMWLMLQQE--KPDDYVVAT-EESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             ceEeCCCcceecceeHHHHHHHHHHHHhcC--CCCcEEecC-CCceeHHHHHHHHHHHcCCC
Confidence             34588999999999999999999999865  357899986 56999999999999999964

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.67  E-value=1.3e-15  Score=127.93  Aligned_cols=175  Identities=15%  Similarity=0.153  Sum_probs=123.4

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCC---
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN---   66 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~---   66 (258)
                      +++++.+|++|.+++.++++++|+|||+++...               +.++.+++++|.+..++++||+ |+....   
T Consensus        57 ~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~  136 (325)
T PLN02989         57 RLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAP  136 (325)
T ss_pred             ceEEEeCCCCCchHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecC
Confidence            578899999999999999999999999997421               4567899999988532889998 664221   


Q ss_pred             C---------CCCCCCCC------CccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCC--CC-CCCCC
Q 025054           67 V---------DAGHPIEP------AKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPG--AT-APPRE  124 (258)
Q Consensus        67 ~---------~~~~~~~~------~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~--~~-~~~~~  124 (258)
                      .         ++..+..|      ..+|..+|..+|++++.    .+++++++||+.+||+.........  .. ....+
T Consensus       137 ~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~  216 (325)
T PLN02989        137 ETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKG  216 (325)
T ss_pred             CccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcC
Confidence            0         11111111      24577799999988864    5899999999999997643211000  00 00011


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      ... .+  .+.++|+|++|+|++++.+++.+. .++.|+++|  ..+|++|+++.+.+.++.
T Consensus       217 ~~~-~~--~~~r~~i~v~Dva~a~~~~l~~~~-~~~~~ni~~--~~~s~~ei~~~i~~~~~~  272 (325)
T PLN02989        217 KNP-FN--TTHHRFVDVRDVALAHVKALETPS-ANGRYIIDG--PVVTIKDIENVLREFFPD  272 (325)
T ss_pred             CCC-CC--CcCcCeeEHHHHHHHHHHHhcCcc-cCceEEEec--CCCCHHHHHHHHHHHCCC
Confidence            111 12  234689999999999999998764 356899964  489999999999999873

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.66  E-value=1.9e-15  Score=128.07  Aligned_cols=179  Identities=16%  Similarity=0.134  Sum_probs=127.5

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CC
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YG   64 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~   64 (258)
                      .++++.+|++|.+++.+++++  +|+|||+++...               +.+..+++++|++.+.++++|+ |+   |+
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg  132 (349)
T TIGR02622        53 KIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYR  132 (349)
T ss_pred             CceEEEccCCCHHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhC
Confidence            466789999999999999985  599999997421               4567899999987654789998 65   33


Q ss_pred             CC-----CCCCCCCCCCccchhhHHHHHHHHHh-----------CCCCeEEEecCcccccCcCCCCC--CCC--CCCCCC
Q 025054           65 SN-----VDAGHPIEPAKSGYARKAKIRRAIEA-----------EGIPHTYVSCNCSFGFFLPTMAQ--PGA--TAPPRE  124 (258)
Q Consensus        65 ~~-----~~~~~~~~~~~~~~~~k~~~e~~l~~-----------~~~~~t~lr~~~~~~~~~~~~~~--~~~--~~~~~~  124 (258)
                      ..     ..+..+..|..+|..+|..+|.+++.           .+++++++||+.+||+.......  +.+  ....+.
T Consensus       133 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~  212 (349)
T TIGR02622       133 NDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNK  212 (349)
T ss_pred             CCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCC
Confidence            21     11122234567788899999988864           28999999999999964211000  000  012223


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCC----CCCCceEEEcC-CCCccCHHHHHHHHHHHhC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP----RTLNKTLYLRP-PKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~----~~~~~~~~l~g-~~~~~t~~e~~~~~~~~~g  185 (258)
                      .+. .++|++.++|+|++|++++++.+++..    ...++.||+++ +++.+|..|+++.+.+.++
T Consensus       213 ~~~-~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~  277 (349)
T TIGR02622       213 IVI-IRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW  277 (349)
T ss_pred             CeE-ECCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence            344 456889999999999999999877642    12367999984 2368999999998888765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.65  E-value=5.6e-15  Score=122.50  Aligned_cols=189  Identities=19%  Similarity=0.181  Sum_probs=135.5

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC--
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS--   65 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~--   65 (258)
                      +..+++.++|+.|...+.++++|+ .|+|+++...               +.++++++++|+++| |+++|+ |+.++  
T Consensus        54 ~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf  131 (361)
T KOG1430|consen   54 SGRVTVILGDLLDANSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVF  131 (361)
T ss_pred             CCceeEEecchhhhhhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEe
Confidence            456899999999999999999999 7666665321               788999999999999 999999 76432  


Q ss_pred             ------CCCCCCCCC--CCccchhhHHHHHHHHHhC----CCCeEEEecCcccccCcCCCCCCCCC-CCCCCceEeccCC
Q 025054           66 ------NVDAGHPIE--PAKSGYARKAKIRRAIEAE----GIPHTYVSCNCSFGFFLPTMAQPGAT-APPRENILFYGDG  132 (258)
Q Consensus        66 ------~~~~~~~~~--~~~~~~~~k~~~e~~l~~~----~~~~t~lr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~g  132 (258)
                            +.++..+.+  ...+|..+|+.+|+++++.    ++..|+|||..+||+.-+........ ....+.....|++
T Consensus       132 ~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~  211 (361)
T KOG1430|consen  132 GGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDG  211 (361)
T ss_pred             CCeecccCCCCCCCccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeecc
Confidence                  111111222  2246777999999999873    38899999999999876543211111 1122334556777


Q ss_pred             CceeeeeccchHHHHHHHH---hc--CCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce-eEecCH
Q 025054          133 QPKAIFNKEEDIATYTIKA---VD--DPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE-KIYVTE  195 (258)
Q Consensus       133 ~~~~~~v~~~D~a~~~~~~---l~--~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~-~~~~~~  195 (258)
                      +...++++.+.++-+.+.+   |.  .+...|+.|+|+. +.....-+....+.+.+|...+ ....|.
T Consensus       212 ~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d-~~p~~~~~~~~~l~~~lg~~~~~~~~~p~  279 (361)
T KOG1430|consen  212 ENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITD-DTPVRFFDFLSPLVKALGYCLPSSIKLPL  279 (361)
T ss_pred             ccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeC-CCcchhhHHHHHHHHhcCCCCCceeecch
Confidence            7888899988887776653   23  2446799999996 5577777777799999998777 555554

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.65  E-value=3.1e-15  Score=127.29  Aligned_cols=195  Identities=15%  Similarity=0.130  Sum_probs=136.1

Q ss_pred             CceeEEeccCCC------HHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCC
Q 025054            5 INCLIAQGDLHD------HESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS   65 (258)
Q Consensus         5 ~gv~~~~~D~~d------~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~   65 (258)
                      .+++++.+|+++      .+.+....+++|+|||+++...            +.+..+++++|.+.+ +++|++ |+.+.
T Consensus        61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v  139 (367)
T TIGR01746        61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISV  139 (367)
T ss_pred             CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccc
Confidence            468999999874      3567777889999999987421            567889999999988 999998 76543


Q ss_pred             CCCC-------CC-----CCCCCccchhhHHHHHHHHHh---CCCCeEEEecCcccccCcCCCCCC-CCC--CCCC-Cce
Q 025054           66 NVDA-------GH-----PIEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSFGFFLPTMAQP-GAT--APPR-ENI  126 (258)
Q Consensus        66 ~~~~-------~~-----~~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~~~~~~~~~~~-~~~--~~~~-~~~  126 (258)
                      ....       ..     ...+...|..+|..+|.++++   .|++++++|||.++|......... ...  .... ...
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~  219 (367)
T TIGR01746       140 LAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLAL  219 (367)
T ss_pred             cCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHh
Confidence            2110       00     011234677899999998875   489999999999998622211000 000  0000 001


Q ss_pred             EeccCCC-ceeeeeccchHHHHHHHHhcCCCC--CCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHH
Q 025054          127 LFYGDGQ-PKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQ  203 (258)
Q Consensus       127 ~~~g~g~-~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~  203 (258)
                      ..++++. ...++++++|++++++.++..+..  .++.|+++++ +.+|++|+++.+.+ +|.+++  .++.+++...+.
T Consensus       220 ~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~-~~~s~~e~~~~i~~-~g~~~~--~~~~~~w~~~~~  295 (367)
T TIGR01746       220 GAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNP-EPVSLDEFLEWLER-AGYNLK--LVSFDEWLQRLE  295 (367)
T ss_pred             CCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCC-CCCCHHHHHHHHHH-cCCCCC--cCCHHHHHHHHH
Confidence            1222223 367799999999999999877643  2789999986 59999999999999 888776  567777877765


Q ss_pred             h
Q 025054          204 D  204 (258)
Q Consensus       204 ~  204 (258)
                      .
T Consensus       296 ~  296 (367)
T TIGR01746       296 D  296 (367)
T ss_pred             H
Confidence            4

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.64  E-value=8.7e-15  Score=121.31  Aligned_cols=172  Identities=11%  Similarity=0.061  Sum_probs=119.4

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCcc-------------chhchHHHHHHHHHhCCccEEEc-CCCCCC----C
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRT-------------EVEDQFKLIAAIKEVGNIKRFFP-TEYGSN----V   67 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~-------------~~~~~~~li~aa~~~g~vk~~v~-S~~~~~----~   67 (258)
                      +++++.+|++|.+++.+++.++|.|+|+++..             ++.++.+++++|.+.++++|+|+ |+.++.    .
T Consensus        58 ~~~~~~~Dl~d~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~  137 (297)
T PLN02583         58 RLKVFDVDPLDYHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDD  137 (297)
T ss_pred             ceEEEEecCCCHHHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccc
Confidence            58899999999999999999999999976431             15788999999988633899998 664321    0


Q ss_pred             C--CCCCCC---C---------CccchhhHHHHHHHHH----hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           68 D--AGHPIE---P---------AKSGYARKAKIRRAIE----AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        68 ~--~~~~~~---~---------~~~~~~~k~~~e~~l~----~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      .  ......   +         ...|..+|..+|+++.    +.++++++|||+.+||+........    . .+.....
T Consensus       138 ~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~----~-~~~~~~~  212 (297)
T PLN02583        138 NISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPY----L-KGAAQMY  212 (297)
T ss_pred             cCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhh----h-cCCcccC
Confidence            0  000000   0         0135569999999884    3689999999999999765321110    1 1112222


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      ++  ..+++||++|+|++++.+++.+...+ .|.+++ ++..+..++++++.+.+..
T Consensus       213 ~~--~~~~~v~V~Dva~a~~~al~~~~~~~-r~~~~~-~~~~~~~~~~~~~~~~~p~  265 (297)
T PLN02583        213 EN--GVLVTVDVNFLVDAHIRAFEDVSSYG-RYLCFN-HIVNTEEDAVKLAQMLSPL  265 (297)
T ss_pred             cc--cCcceEEHHHHHHHHHHHhcCcccCC-cEEEec-CCCccHHHHHHHHHHhCCC
Confidence            22  34679999999999999999875444 677775 3234467899999998763

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.61  E-value=3.8e-14  Score=120.36  Aligned_cols=177  Identities=16%  Similarity=0.170  Sum_probs=120.5

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------------------hhchHHHHHHHHHhCCccEEEc-CC
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------------------VEDQFKLIAAIKEVGNIKRFFP-TE   62 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------------------~~~~~~li~aa~~~g~vk~~v~-S~   62 (258)
                      +++++.+|+.|.+.+.++++++|+|||+++...                      +.++.+++++|++++++++||+ |+
T Consensus        59 ~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS  138 (353)
T PLN02896         59 RLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSS  138 (353)
T ss_pred             eEEEEECCCCCHHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEec
Confidence            578999999999999999999999999997521                      1456789999988744899998 65


Q ss_pred             ---CCCCC---------CCC--CC-------CCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCC
Q 025054           63 ---YGSNV---------DAG--HP-------IEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPG  117 (258)
Q Consensus        63 ---~~~~~---------~~~--~~-------~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~  117 (258)
                         ++...         ++.  .+       .++..+|..+|..+|+++..    .+++++++|++.+||+...... +.
T Consensus       139 ~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-~~  217 (353)
T PLN02896        139 ISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSV-PS  217 (353)
T ss_pred             hhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCC-Cc
Confidence               33111         010  00       01223677799999997754    5899999999999997543210 00


Q ss_pred             CC----C-CCCCc--eEeccCCC---ceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          118 AT----A-PPREN--ILFYGDGQ---PKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       118 ~~----~-~~~~~--~~~~g~g~---~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      ..    . ..+..  ....+..+   ..++|+|++|+++++..++..+. .++.|+++  +..+|++|+++.+.+.++.
T Consensus       218 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~-~~~~~~~~--~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        218 SIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTK-AEGRYICC--VDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             hHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCC-cCccEEec--CCCCCHHHHHHHHHHhCCC
Confidence            00    0 00111  11111111   23689999999999999998653 34456554  4589999999999999873

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.61  E-value=4.4e-14  Score=114.29  Aligned_cols=165  Identities=22%  Similarity=0.219  Sum_probs=115.2

Q ss_pred             CceeEEeccCCC-HHHHHHhh-CCCcEEEEccCccc-----------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCC-
Q 025054            5 INCLIAQGDLHD-HESLVKAI-KPVDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDA-   69 (258)
Q Consensus         5 ~gv~~~~~D~~d-~~~l~~al-~g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~-   69 (258)
                      .+++++.+|++| .+.+.+++ .++|+||++++...           ..+..++++++++.+ ++|+|+ |+.+..... 
T Consensus        62 ~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~  140 (251)
T PLN00141         62 PSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAM  140 (251)
T ss_pred             CceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCc
Confidence            368999999998 57888888 69999999987531           235789999999999 999998 776432111 


Q ss_pred             CCCCCC-------CccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccc
Q 025054           70 GHPIEP-------AKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEE  142 (258)
Q Consensus        70 ~~~~~~-------~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~  142 (258)
                      .....+       ...++..|..+|++++++++++++||||++++.....            .+.+.........+++.+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~------------~~~~~~~~~~~~~~i~~~  208 (251)
T PLN00141        141 GQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTG------------NIVMEPEDTLYEGSISRD  208 (251)
T ss_pred             ccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCc------------eEEECCCCccccCcccHH
Confidence            010001       1112346888999999999999999999988753210            111111111223579999


Q ss_pred             hHHHHHHHHhcCCCCCCceEEEcC--CCCccCHHHHHHHHHH
Q 025054          143 DIATYTIKAVDDPRTLNKTLYLRP--PKNIYSFKELVALWEK  182 (258)
Q Consensus       143 D~a~~~~~~l~~~~~~~~~~~l~g--~~~~~t~~e~~~~~~~  182 (258)
                      |+|++++.++.++...++++.+.+  +....|+++++..+++
T Consensus       209 dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        209 QVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             HHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            999999999988766677787775  2224788998887765

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.59  E-value=2.1e-15  Score=124.14  Aligned_cols=191  Identities=18%  Similarity=0.141  Sum_probs=122.1

Q ss_pred             cccCceeEE-----eccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEE
Q 025054            2 LYMINCLIA-----QGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         2 l~~~gv~~~-----~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v   59 (258)
                      |...|.+++     ..|+.|.+.+.+.++  ..|+|||+++...               +....+|+++|.+.| + ++|
T Consensus        20 l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~-~-~li   97 (286)
T PF04321_consen   20 LKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG-A-RLI   97 (286)
T ss_dssp             HTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEE
T ss_pred             HhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC-C-cEE
Confidence            344565565     567889999999887  4799999997642               577889999999999 6 555


Q ss_pred             c-CC---CCCC----CCCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCC-CCCCCCceEecc
Q 025054           60 P-TE---YGSN----VDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGA-TAPPRENILFYG  130 (258)
Q Consensus        60 ~-S~---~~~~----~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g  130 (258)
                      + |+   |+..    ..+.....|.+.|..+|..+|+.+++..-.++|+|++++||.....+..... ....++.+.+..
T Consensus        98 ~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~  177 (286)
T PF04321_consen   98 HISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFD  177 (286)
T ss_dssp             EEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEES
T ss_pred             EeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeC
Confidence            5 65   3222    1223334566778889999999999855599999999999973222111000 012234455553


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC---CCCceEEEcCCCCccCHHHHHHHHHHHhCCcc-eeEecCHHH
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR---TLNKTLYLRPPKNIYSFKELVALWEKKIGKTL-EKIYVTEDQ  197 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~---~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~-~~~~~~~~~  197 (258)
                        ++.++++++.|+|+++..+++...   ...++|+++|+ +.+|..|+++.+.+.+|.+. .+..++.++
T Consensus       178 --d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~-~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~  245 (286)
T PF04321_consen  178 --DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGP-ERVSRYEFAEAIAKILGLDPELIKPVSSSE  245 (286)
T ss_dssp             --SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---B-S-EEHHHHHHHHHHHHTHCTTEEEEESSTT
T ss_pred             --CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecC-cccCHHHHHHHHHHHhCCCCceEEeccccc
Confidence              678899999999999999998752   34689999996 48999999999999999876 666666543

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.58  E-value=4.4e-14  Score=116.63  Aligned_cols=176  Identities=15%  Similarity=0.102  Sum_probs=116.2

Q ss_pred             HHHHHhhCCCcEEEEccCccc-----------------hhchHHHHHHHHHhCCcc--EEEc-CC---CCCCCCCC-CCC
Q 025054           18 ESLVKAIKPVDVVISAVGRTE-----------------VEDQFKLIAAIKEVGNIK--RFFP-TE---YGSNVDAG-HPI   73 (258)
Q Consensus        18 ~~l~~al~g~d~Vi~~~~~~~-----------------~~~~~~li~aa~~~g~vk--~~v~-S~---~~~~~~~~-~~~   73 (258)
                      ..+.++++++|+|||+++...                 +.+.++++++|++++ ++  +||+ |+   ++...... ...
T Consensus        49 ~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~  127 (292)
T TIGR01777        49 LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEE  127 (292)
T ss_pred             cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcc
Confidence            445677889999999997421                 456889999999998 74  5666 44   23211110 000


Q ss_pred             --CCCccch-hhHHHHHHHHH---hCCCCeEEEecCcccccCcCCCCCCC-CCCCCCCceEeccCCCceeeeeccchHHH
Q 025054           74 --EPAKSGY-ARKAKIRRAIE---AEGIPHTYVSCNCSFGFFLPTMAQPG-ATAPPRENILFYGDGQPKAIFNKEEDIAT  146 (258)
Q Consensus        74 --~~~~~~~-~~k~~~e~~l~---~~~~~~t~lr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~g~~~~~~v~~~D~a~  146 (258)
                        .....++ ..+...|+.++   +.+++++++||+.+||+......... .......  ..+|++++.+++++++|+|+
T Consensus       128 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~i~v~Dva~  205 (292)
T TIGR01777       128 DSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLG--GPLGSGRQWFSWIHIEDLVQ  205 (292)
T ss_pred             cCCCCCChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcc--cccCCCCcccccEeHHHHHH
Confidence              1112233 34545555543   36899999999999997422110000 0000001  12577889999999999999


Q ss_pred             HHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHH
Q 025054          147 YTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQIL  199 (258)
Q Consensus       147 ~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~  199 (258)
                      ++..+++.+. .++.|+++++ +.+|++|+++.+++.+|.+..+ .+|...+.
T Consensus       206 ~i~~~l~~~~-~~g~~~~~~~-~~~s~~di~~~i~~~~g~~~~~-~~p~~~~~  255 (292)
T TIGR01777       206 LILFALENAS-ISGPVNATAP-EPVRNKEFAKALARALHRPAFF-PVPAFVLR  255 (292)
T ss_pred             HHHHHhcCcc-cCCceEecCC-CccCHHHHHHHHHHHhCCCCcC-cCCHHHHH
Confidence            9999998764 4568999874 6999999999999999987543 47776544

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.58  E-value=1.4e-13  Score=112.56  Aligned_cols=189  Identities=20%  Similarity=0.213  Sum_probs=144.0

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCcc------chhchHHHHHHHHHhC-CccEEEc-CCCCCCCCCCCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRT------EVEDQFKLIAAIKEVG-NIKRFFP-TEYGSNVDAGHPIEPA   76 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~------~~~~~~~li~aa~~~g-~vk~~v~-S~~~~~~~~~~~~~~~   76 (258)
                      .+++++.+|+.++.++..+++|++.++++.+..      ......++++++++++ .+++++. |.++.+..      ..
T Consensus        42 ~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~------~~  115 (275)
T COG0702          42 GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAA------SP  115 (275)
T ss_pred             CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCC------Cc
Confidence            679999999999999999999999998887732      1344566667776643 2889998 88877653      24


Q ss_pred             ccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054           77 KSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus        77 ~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      ..|...|..+|+.++++++++|++|+..+|......+...    ......++...+..+.++++.+|++.+++.++..+.
T Consensus       116 ~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~  191 (275)
T COG0702         116 SALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAFIEA----AEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA  191 (275)
T ss_pred             cHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhHHHH----HHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc
Confidence            5788899999999999999999999877776544331100    011111222223338899999999999999999887


Q ss_pred             CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHh
Q 025054          157 TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQD  204 (258)
Q Consensus       157 ~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  204 (258)
                      ..++.|.+.|| +..|..++++.+.+..|++..+...+..........
T Consensus       192 ~~~~~~~l~g~-~~~~~~~~~~~l~~~~gr~~~~~~~~~~~~~~~~~~  238 (275)
T COG0702         192 TAGRTYELAGP-EALTLAELASGLDYTIGRPVGLIPEALAALTLALSG  238 (275)
T ss_pred             ccCcEEEccCC-ceecHHHHHHHHHHHhCCcceeeCCcHHHHHHHhcc
Confidence            78999999998 599999999999999999999977776555444433

>PLN02778 3,5-epimerase/4-reductase

Probab=99.55  E-value=1.4e-13  Score=114.07  Aligned_cols=184  Identities=14%  Similarity=0.095  Sum_probs=122.5

Q ss_pred             cccCceeE--EeccCCCHHHHHHhhC--CCcEEEEccCccc------------------hhchHHHHHHHHHhCCccEEE
Q 025054            2 LYMINCLI--AQGDLHDHESLVKAIK--PVDVVISAVGRTE------------------VEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         2 l~~~gv~~--~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~------------------~~~~~~li~aa~~~g~vk~~v   59 (258)
                      |.+.|.++  ..+|++|.+.+...++  ++|+|||+++...                  +.++.+++++|++.| +++++
T Consensus        29 L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~  107 (298)
T PLN02778         29 CQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTN  107 (298)
T ss_pred             HHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence            44556555  4578888888888887  6899999997420                  557889999999999 99877


Q ss_pred             cCC---CCCCC----------CCCC-CCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           60 PTE---YGSNV----------DAGH-PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        60 ~S~---~~~~~----------~~~~-~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      +|+   |+...          .+.. +.++.++|..+|..+|.+++... +...+|++..++.-......+.........
T Consensus       108 ~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~  186 (298)
T PLN02778        108 YATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEK  186 (298)
T ss_pred             EecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCC
Confidence            743   33211          1111 12233567789999999998743 567888876555321110000000111222


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE  195 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~  195 (258)
                      +...+     .++++++|+++++..++...  .++.||++++ +.+|+.|+++.+.+.+|...++..+..
T Consensus       187 ~~~~~-----~s~~yv~D~v~al~~~l~~~--~~g~yNigs~-~~iS~~el~~~i~~~~~~~~~~~~~~i  248 (298)
T PLN02778        187 VVNIP-----NSMTILDELLPISIEMAKRN--LTGIYNFTNP-GVVSHNEILEMYRDYIDPSFTWKNFTL  248 (298)
T ss_pred             eeEcC-----CCCEEHHHHHHHHHHHHhCC--CCCeEEeCCC-CcccHHHHHHHHHHHhCCCceeccccH
Confidence            22322     26899999999999998754  3469999874 599999999999999997665544443

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.54  E-value=1.9e-13  Score=119.82  Aligned_cols=168  Identities=17%  Similarity=0.113  Sum_probs=116.9

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGH   71 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~   71 (258)
                      +++++.+|+.|.+++.++|.++|+|||+++...             +.+.++++++|+++| ++|||+ |+.+.......
T Consensus       139 ~v~iV~gDLtD~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p  217 (576)
T PLN03209        139 KLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFP  217 (576)
T ss_pred             ceEEEEecCCCHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCcc
Confidence            478999999999999999999999999987531             356899999999999 999998 88765321110


Q ss_pred             --CCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHH
Q 025054           72 --PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTI  149 (258)
Q Consensus        72 --~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~  149 (258)
                        .......++..|..+|++|+++|++|++||||++.+......        ....+.....+......+..+|||++++
T Consensus       218 ~~~~~sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~--------~t~~v~~~~~d~~~gr~isreDVA~vVv  289 (576)
T PLN03209        218 AAILNLFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNLTLSEEDTLFGGQVSNLQVAELMA  289 (576)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc--------cccceeeccccccCCCccCHHHHHHHHH
Confidence              011123455688999999999999999999998875422110        0111222111111123589999999999


Q ss_pred             HHhcCCC-CCCceEEEcCCCCccCHHHHHHHHHHH
Q 025054          150 KAVDDPR-TLNKTLYLRPPKNIYSFKELVALWEKK  183 (258)
Q Consensus       150 ~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~~~~~  183 (258)
                      .++.++. ..++++.+.+ +.......+.+++.++
T Consensus       290 fLasd~~as~~kvvevi~-~~~~p~~~~~~~~~~i  323 (576)
T PLN03209        290 CMAKNRRLSYCKVVEVIA-ETTAPLTPMEELLAKI  323 (576)
T ss_pred             HHHcCchhccceEEEEEe-CCCCCCCCHHHHHHhc
Confidence            9999764 6789999885 3334445556666554

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.52  E-value=1.2e-12  Score=105.43  Aligned_cols=189  Identities=22%  Similarity=0.216  Sum_probs=137.1

Q ss_pred             cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---
Q 025054            4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---   62 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---   62 (258)
                      ..++.++++|+.|.+.|++.|+  +.|.|+|+++...               +.++.++++++++.+ ++.+|+ |+   
T Consensus        53 ~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatv  131 (343)
T KOG1371|consen   53 GKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATV  131 (343)
T ss_pred             CCceEEEEeccCCHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceee
Confidence            3679999999999999999998  5799999987532               678899999999999 999998 43   


Q ss_pred             CCCCC----CCCCCC-CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccc--cCcC----CC-----CCCCCC--C
Q 025054           63 YGSNV----DAGHPI-EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFG--FFLP----TM-----AQPGAT--A  120 (258)
Q Consensus        63 ~~~~~----~~~~~~-~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~--~~~~----~~-----~~~~~~--~  120 (258)
                      ||...    ++..+. .|.++|..+|..+|+.+..    .++..+.||-...+|  .+..    .+     ..+...  .
T Consensus       132 YG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~va  211 (343)
T KOG1371|consen  132 YGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVA  211 (343)
T ss_pred             ecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchh
Confidence            33211    112222 3788999999999999876    357888899777776  2110    00     000000  0


Q ss_pred             CC-CCceEe------ccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          121 PP-RENILF------YGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       121 ~~-~~~~~~------~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      .. ...+.+      ..+|+..+.++++-|.|+....++...+.  .-++||++. +...|..|+..++++.+|.++++.
T Consensus       212 igr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgt-g~g~~V~~lv~a~~k~~g~~~k~~  290 (343)
T KOG1371|consen  212 IGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGT-GKGSSVLELVTAFEKALGVKIKKK  290 (343)
T ss_pred             hcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecC-CCCccHHHHHHHHHHHhcCCCCcc
Confidence            00 011112      23568899999999999999999988642  334888875 668999999999999999988886


Q ss_pred             ecC
Q 025054          192 YVT  194 (258)
Q Consensus       192 ~~~  194 (258)
                      -++
T Consensus       291 ~v~  293 (343)
T KOG1371|consen  291 VVP  293 (343)
T ss_pred             ccC
Confidence            655

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.50  E-value=7.8e-13  Score=104.25  Aligned_cols=166  Identities=21%  Similarity=0.281  Sum_probs=121.7

Q ss_pred             HhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCCCCCCC---------CCC
Q 025054           22 KAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSNVDAG---------HPI   73 (258)
Q Consensus        22 ~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~~~~~---------~~~   73 (258)
                      ..+.++|.|||+|++..               ..++.+.+-.|++.+  +||++ |+   ||.....+         .+.
T Consensus        87 pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpi  164 (350)
T KOG1429|consen   87 PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPI  164 (350)
T ss_pred             HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcC
Confidence            47789999999997632               567788888999988  78887 54   33311110         011


Q ss_pred             CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-----CCCCCCCCCceEeccCCCceeeeeccchH
Q 025054           74 EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-----PGATAPPRENILFYGDGQPKAIFNKEEDI  144 (258)
Q Consensus        74 ~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~g~~~~~~v~~~D~  144 (258)
                      .+..-|...|..+|.+..+    .|+.++|.|+-..||+.......     +....+.+..+.++|+|.+.++|+++.|+
T Consensus       165 gpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~  244 (350)
T KOG1429|consen  165 GPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDL  244 (350)
T ss_pred             CchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHH
Confidence            1222344489999987754    68999999999999977643210     00012456689999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054          145 ATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       145 a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                      .+++.++++++  ...-+||++|+ ..|+.|+|+.+.+..|....++.
T Consensus       245 Vegll~Lm~s~--~~~pvNiGnp~-e~Tm~elAemv~~~~~~~s~i~~  289 (350)
T KOG1429|consen  245 VEGLLRLMESD--YRGPVNIGNPG-EFTMLELAEMVKELIGPVSEIEF  289 (350)
T ss_pred             HHHHHHHhcCC--CcCCcccCCcc-ceeHHHHHHHHHHHcCCCcceee
Confidence            99999999987  44459999987 99999999999999865544433

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.46  E-value=2.3e-12  Score=98.38  Aligned_cols=217  Identities=17%  Similarity=0.230  Sum_probs=145.0

Q ss_pred             eccCCCHHHHHHhhC--CCcEEEEccCccc----------------hhchHHHHHHHHHhCCccEEEc--CC--------
Q 025054           11 QGDLHDHESLVKAIK--PVDVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRFFP--TE--------   62 (258)
Q Consensus        11 ~~D~~d~~~l~~al~--g~d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~v~--S~--------   62 (258)
                      ..|+++.++.++.|+  ....|||+++...                +..+-|++..|-+.| |++++.  |+        
T Consensus        38 d~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~  116 (315)
T KOG1431|consen   38 DADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTS  116 (315)
T ss_pred             cccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCC
Confidence            578889888888887  4678999987531                567789999999999 999886  43        


Q ss_pred             CCCCCCCC--CCCCCCccchh-hHHHHH----HHHHhCCCCeEEEecCcccccCcCCC---C--CCCCC-------CCCC
Q 025054           63 YGSNVDAG--HPIEPAKSGYA-RKAKIR----RAIEAEGIPHTYVSCNCSFGFFLPTM---A--QPGAT-------APPR  123 (258)
Q Consensus        63 ~~~~~~~~--~~~~~~~~~~~-~k~~~e----~~l~~~~~~~t~lr~~~~~~~~~~~~---~--~~~~~-------~~~~  123 (258)
                      +..+.+..  .+..|.+..|. .|..+.    .|-.+.|..+|.+-|..+||+--+.-   .  .++.+       .-..
T Consensus       117 yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gt  196 (315)
T KOG1431|consen  117 YPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGT  196 (315)
T ss_pred             CCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCC
Confidence            22222111  11123333444 675553    34456899999999999998432211   1  11110       0122


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHH
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQ  203 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~  203 (258)
                      ..+.++|+|.-.+.|++.+|+|++.+.++.+-.....++.-.|..+++|++|+++++.++.|-.-+...-+..       
T Consensus       197 d~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK-------  269 (315)
T KOG1431|consen  197 DELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTK-------  269 (315)
T ss_pred             ceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccC-------
Confidence            3688999999999999999999999999987543444444455556999999999999999876666554320       


Q ss_pred             hccCcchhhheeeeeEEEecCCccccCCCCCcccccccCCCCcccCHHHHHhh
Q 025054          204 DASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVEEYLDQ  256 (258)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~s~ee~l~~  256 (258)
                                       ..|.   +....+ +.....++|+.+++.|++-+++
T Consensus       270 -----------------~DGq---~kKtas-nsKL~sl~pd~~ft~l~~ai~~  301 (315)
T KOG1431|consen  270 -----------------SDGQ---FKKTAS-NSKLRSLLPDFKFTPLEQAISE  301 (315)
T ss_pred             -----------------CCCC---cccccc-hHHHHHhCCCcccChHHHHHHH
Confidence                             1221   111111 2356688999999999998875

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.44  E-value=1.7e-13  Score=110.64  Aligned_cols=168  Identities=15%  Similarity=0.131  Sum_probs=113.2

Q ss_pred             EEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCC
Q 025054            9 IAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAG   70 (258)
Q Consensus         9 ~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~   70 (258)
                      .+.+|+.|.+.+.++|+  ++|+|||+|+...               +.+++|++++|.++| |++||. |+-=+     
T Consensus        58 ~vigDvrd~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKA-----  131 (293)
T PF02719_consen   58 PVIGDVRDKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKA-----  131 (293)
T ss_dssp             --CTSCCHHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGC-----
T ss_pred             ceeecccCHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEcccccc-----
Confidence            45899999999999999  9999999998642               788999999999999 999999 65222     


Q ss_pred             CCCCCCccchhhHHHHHHHHHh----C---CCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccch
Q 025054           71 HPIEPAKSGYARKAKIRRAIEA----E---GIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEED  143 (258)
Q Consensus        71 ~~~~~~~~~~~~k~~~e~~l~~----~---~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D  143 (258)
                        .+|.+-+..+|..+|.++.+    .   +..++++|.|.++|.-.+.+..+......++++++.. .+..+=|+++++
T Consensus       132 --v~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~-p~mtRffmti~E  208 (293)
T PF02719_consen  132 --VNPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTD-PDMTRFFMTIEE  208 (293)
T ss_dssp             --SS--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECE-TT-EEEEE-HHH
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCC-CCcEEEEecHHH
Confidence              12567788899999999976    2   4689999999999844332211100012345677764 466677999999


Q ss_pred             HHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          144 IATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       144 ~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      .+..+..++.... .|++|.+-- +.++++.|+++.+-+..|..
T Consensus       209 Av~Lvl~a~~~~~-~geifvl~m-g~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  209 AVQLVLQAAALAK-GGEIFVLDM-GEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             HHHHHHHHHHH---TTEEEEE----TCEECCCHHHHHHHHTT-E
T ss_pred             HHHHHHHHHhhCC-CCcEEEecC-CCCcCHHHHHHHHHhhcccc
Confidence            9999999887642 466666643 46899999999999999853

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.43  E-value=2.5e-12  Score=110.83  Aligned_cols=188  Identities=14%  Similarity=0.151  Sum_probs=139.5

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN   66 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~   66 (258)
                      .....+.||+.|.+.+.+++++  +|+|||+|+...               +-+++|+++||.++| |++||. |+-=+ 
T Consensus       302 ~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKA-  379 (588)
T COG1086         302 LKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKA-  379 (588)
T ss_pred             cceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcc-
Confidence            3467889999999999999998  999999998632               788999999999999 999998 75322 


Q ss_pred             CCCCCCCCCCccchhhHHHHHHHHHh-----C--CCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeee
Q 025054           67 VDAGHPIEPAKSGYARKAKIRRAIEA-----E--GIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFN  139 (258)
Q Consensus        67 ~~~~~~~~~~~~~~~~k~~~e~~l~~-----~--~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v  139 (258)
                            .+|.+-+..+|..+|..+.+     +  +..++.+|.|+++|.-.+.+..+.....+++++++. +++..+=|.
T Consensus       380 ------V~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvT-dp~mtRyfM  452 (588)
T COG1086         380 ------VNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVT-DPDMTRFFM  452 (588)
T ss_pred             ------cCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCcccc-CCCceeEEE
Confidence                  23577888999999999865     2  378999999999986554332111111234556665 456666699


Q ss_pred             ccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC----Cc--ceeEec-CHHHHHHHHH
Q 025054          140 KEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG----KT--LEKIYV-TEDQILQMIQ  203 (258)
Q Consensus       140 ~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g----~~--~~~~~~-~~~~~~~~~~  203 (258)
                      ++.|.++.+..+....+ .|.+|.+-. |+++++.|+++.+-+..|    ..  ++++-+ |-|.+.+.+.
T Consensus       453 TI~EAv~LVlqA~a~~~-gGeifvldM-GepvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRpGEKl~EeLl  521 (588)
T COG1086         453 TIPEAVQLVLQAGAIAK-GGEIFVLDM-GEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRPGEKLYEELL  521 (588)
T ss_pred             EHHHHHHHHHHHHhhcC-CCcEEEEcC-CCCeEHHHHHHHHHHHhCCCCCCCCCeEEEecCCchhhhhhhc
Confidence            99999999999887752 555665543 579999999999999997    22  333333 4555655543

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.40  E-value=2.6e-11  Score=108.23  Aligned_cols=181  Identities=14%  Similarity=0.139  Sum_probs=125.1

Q ss_pred             CceeEEeccCCCH------HHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCC--
Q 025054            5 INCLIAQGDLHDH------ESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEY--   63 (258)
Q Consensus         5 ~gv~~~~~D~~d~------~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~--   63 (258)
                      ..+.++.||++++      +.+..+.+++|+|||+++...            +.++.+++++|++.+++++||+ |+.  
T Consensus       192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV  271 (605)
T PLN02503        192 SKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV  271 (605)
T ss_pred             ccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence            3588899999986      456666678999999998632            6788999999998755899998 552  


Q ss_pred             -CCCC----CCCCC----------------------------------------------------------CCCCccch
Q 025054           64 -GSNV----DAGHP----------------------------------------------------------IEPAKSGY   80 (258)
Q Consensus        64 -~~~~----~~~~~----------------------------------------------------------~~~~~~~~   80 (258)
                       |...    +...+                                                          ...++.|-
T Consensus       272 yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt  351 (605)
T PLN02503        272 NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV  351 (605)
T ss_pred             ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHH
Confidence             2210    00000                                                          11125566


Q ss_pred             hhHHHHHHHHHh--CCCCeEEEecCcccccCcCCCC---------CCCCCCCCCCceE-eccCCCceeeeeccchHHHHH
Q 025054           81 ARKAKIRRAIEA--EGIPHTYVSCNCSFGFFLPTMA---------QPGATAPPRENIL-FYGDGQPKAIFNKEEDIATYT  148 (258)
Q Consensus        81 ~~k~~~e~~l~~--~~~~~t~lr~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~g~g~~~~~~v~~~D~a~~~  148 (258)
                      .+|+.+|+.+++  .++|.+++||+.+...+-..+.         .+.......+.+. ++++++...++|+++.++.++
T Consensus       352 ~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~  431 (605)
T PLN02503        352 FTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNAT  431 (605)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHH
Confidence            699999999987  4799999999999542211110         0000111233333 678889999999999999999


Q ss_pred             HHHhcC-C---CCCCceEEEcCC-CCccCHHHHHHHHHHHhC
Q 025054          149 IKAVDD-P---RTLNKTLYLRPP-KNIYSFKELVALWEKKIG  185 (258)
Q Consensus       149 ~~~l~~-~---~~~~~~~~l~g~-~~~~t~~e~~~~~~~~~g  185 (258)
                      ..++.. .   +..+++|+++++ .+++|+.|+.+.+.+...
T Consensus       432 i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~  473 (605)
T PLN02503        432 LAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYK  473 (605)
T ss_pred             HHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh
Confidence            888432 2   124689999842 368999999999987654

>PRK12320 hypothetical protein; Provisional

Probab=99.39  E-value=5.2e-12  Score=113.95  Aligned_cols=155  Identities=12%  Similarity=0.050  Sum_probs=111.3

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPA   76 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~   76 (258)
                      .+++++.+|++|+. +.++++++|+|||+++...       +.++.+++++|+++| + ++|+ |+...+.         
T Consensus        40 ~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~G~~---------  107 (699)
T PRK12320         40 PRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPGGVGITGLAHVANAAARAG-A-RLLFVSQAAGRP---------  107 (699)
T ss_pred             CCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchhhHHHHHHHHHHHHHHHcC-C-eEEEEECCCCCC---------
Confidence            46889999999984 7888999999999997532       577899999999999 8 5777 6542111         


Q ss_pred             ccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054           77 KSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus        77 ~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      ..|    ...|+++.+++++++++|++++||....... ....  . ..+... ..++++.++|++|++++++.+++.+ 
T Consensus       108 ~~~----~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~-~r~I--~-~~l~~~-~~~~pI~vIyVdDvv~alv~al~~~-  177 (699)
T PRK12320        108 ELY----RQAETLVSTGWAPSLVIRIAPPVGRQLDWMV-CRTV--A-TLLRSK-VSARPIRVLHLDDLVRFLVLALNTD-  177 (699)
T ss_pred             ccc----cHHHHHHHhcCCCEEEEeCceecCCCCcccH-hHHH--H-HHHHHH-HcCCceEEEEHHHHHHHHHHHHhCC-
Confidence            011    2578888888899999999999996432100 0000  0 000000 1134566799999999999998764 


Q ss_pred             CCCceEEEcCCCCccCHHHHHHHHHHH
Q 025054          157 TLNKTLYLRPPKNIYSFKELVALWEKK  183 (258)
Q Consensus       157 ~~~~~~~l~g~~~~~t~~e~~~~~~~~  183 (258)
                       .+++||++|+ +.+|++|+++.+...
T Consensus       178 -~~GiyNIG~~-~~~Si~el~~~i~~~  202 (699)
T PRK12320        178 -RNGVVDLATP-DTTNVVTAWRLLRSV  202 (699)
T ss_pred             -CCCEEEEeCC-CeeEHHHHHHHHHHh
Confidence             3459999986 599999999988765

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.37  E-value=2.8e-11  Score=95.54  Aligned_cols=174  Identities=15%  Similarity=0.116  Sum_probs=117.2

Q ss_pred             HHHHHHhhC-CCcEEEEccCccc-----------------hhchHHHHHHHHH--hCCccEEEc-CCCC---CCCCCC-C
Q 025054           17 HESLVKAIK-PVDVVISAVGRTE-----------------VEDQFKLIAAIKE--VGNIKRFFP-TEYG---SNVDAG-H   71 (258)
Q Consensus        17 ~~~l~~al~-g~d~Vi~~~~~~~-----------------~~~~~~li~aa~~--~g~vk~~v~-S~~~---~~~~~~-~   71 (258)
                      .+.+..... ++|+|||+++.+-                 +..++.++++..+  .+ ++.+|. |..|   ...+.. .
T Consensus        46 ~~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~-P~~~isaSAvGyYG~~~~~~~t  124 (297)
T COG1090          46 WEGLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETK-PKVLISASAVGYYGHSGDRVVT  124 (297)
T ss_pred             cchhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCC-CcEEEecceEEEecCCCceeee
Confidence            355666666 7999999998641                 5677888887774  45 888887 6644   322110 0


Q ss_pred             -CCCCCccchh-hHHHHHHHHH---hCCCCeEEEecCcccccCcCCCCCCC---CCCCCCCceEeccCCCceeeeeccch
Q 025054           72 -PIEPAKSGYA-RKAKIRRAIE---AEGIPHTYVSCNCSFGFFLPTMAQPG---ATAPPRENILFYGDGQPKAIFNKEED  143 (258)
Q Consensus        72 -~~~~~~~~~~-~k~~~e~~l~---~~~~~~t~lr~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~g~~~~~~v~~~D  143 (258)
                       ..++...+.. ....=|+...   +.|..++++|.|.+.+.-...+....   ...+ +   --.|+|.+.++|||++|
T Consensus       125 E~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~gl-G---G~~GsGrQ~~SWIhieD  200 (297)
T COG1090         125 EESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGL-G---GKLGSGRQWFSWIHIED  200 (297)
T ss_pred             cCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhcc-C---CccCCCCceeeeeeHHH
Confidence             1122333332 2222343332   25899999999999985433221111   0001 1   23589999999999999


Q ss_pred             HHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054          144 IATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI  198 (258)
Q Consensus       144 ~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~  198 (258)
                      +.+++..+++++. ..+.||+++|. +++.+|++..+.++++++.. ..+|...+
T Consensus       201 ~v~~I~fll~~~~-lsGp~N~taP~-PV~~~~F~~al~r~l~RP~~-~~vP~~~~  252 (297)
T COG1090         201 LVNAILFLLENEQ-LSGPFNLTAPN-PVRNKEFAHALGRALHRPAI-LPVPSFAL  252 (297)
T ss_pred             HHHHHHHHHhCcC-CCCcccccCCC-cCcHHHHHHHHHHHhCCCcc-ccCcHHHH
Confidence            9999999999975 67789999985 99999999999999997544 46676444

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.31  E-value=5.8e-11  Score=117.33  Aligned_cols=193  Identities=12%  Similarity=0.041  Sum_probs=131.9

Q ss_pred             ceeEEeccCC------CHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054            6 NCLIAQGDLH------DHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN   66 (258)
Q Consensus         6 gv~~~~~D~~------d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~   66 (258)
                      .++++.+|+.      +.+.+.++.+++|+|||+++...            +.++.+++++|++.+ +++|++ |+.++.
T Consensus      1035 ~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443      1035 RIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSAL 1113 (1389)
T ss_pred             ceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeec
Confidence            5889999986      44667777889999999997532            677899999999988 999998 664221


Q ss_pred             C-------------------CCCC-----CCCCCccchhhHHHHHHHHHh---CCCCeEEEecCcccccCcCCCCCCC-C
Q 025054           67 V-------------------DAGH-----PIEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSFGFFLPTMAQPG-A  118 (258)
Q Consensus        67 ~-------------------~~~~-----~~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~~~~~~~~~~~~-~  118 (258)
                      .                   .+..     ...+...|..+|..+|.++..   .|++++++|||.++|.......... +
T Consensus      1114 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~ 1193 (1389)
T TIGR03443      1114 DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDF 1193 (1389)
T ss_pred             CcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhH
Confidence            0                   0000     011234577899999999865   5899999999999996433211100 0


Q ss_pred             C--CCC-CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEec
Q 025054          119 T--APP-RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYV  193 (258)
Q Consensus       119 ~--~~~-~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~  193 (258)
                      .  ... .......+++...++|++++|++++++.++..+.  ..+..|+++++ ..+++.++++.+.+ .|.+++.  +
T Consensus      1194 ~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~-~g~~~~~--~ 1269 (1389)
T TIGR03443      1194 LLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH-PRIRFNDFLGTLKT-YGYDVEI--V 1269 (1389)
T ss_pred             HHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC-CCCcHHHHHHHHHH-hCCCCCc--c
Confidence            0  000 0012233445667899999999999999987653  23457889864 58999999999976 4765554  5


Q ss_pred             CHHHHHHHHH
Q 025054          194 TEDQILQMIQ  203 (258)
Q Consensus       194 ~~~~~~~~~~  203 (258)
                      +..++...+.
T Consensus      1270 ~~~~w~~~l~ 1279 (1389)
T TIGR03443      1270 DYVHWRKSLE 1279 (1389)
T ss_pred             CHHHHHHHHH
Confidence            5555665553

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.29  E-value=6.1e-11  Score=108.85  Aligned_cols=186  Identities=13%  Similarity=0.096  Sum_probs=121.3

Q ss_pred             cccCceeE--EeccCCCHHHHHHhhC--CCcEEEEccCcc---c---------------hhchHHHHHHHHHhCCccEEE
Q 025054            2 LYMINCLI--AQGDLHDHESLVKAIK--PVDVVISAVGRT---E---------------VEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         2 l~~~gv~~--~~~D~~d~~~l~~al~--g~d~Vi~~~~~~---~---------------~~~~~~li~aa~~~g~vk~~v   59 (258)
                      |.+.|.++  ..+|++|.+.+...++  +.|+|||+++..   .               +.++.+++++|++.| +++++
T Consensus       400 L~~~g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~  478 (668)
T PLN02260        400 CEKQGIAYEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMN  478 (668)
T ss_pred             HHhCCCeEEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEE
Confidence            34456555  5678999999988887  789999999743   1               567899999999999 98777


Q ss_pred             cCC---CCCC----------CCCCCCCCC-CccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCC-
Q 025054           60 PTE---YGSN----------VDAGHPIEP-AKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE-  124 (258)
Q Consensus        60 ~S~---~~~~----------~~~~~~~~~-~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~-  124 (258)
                      .|+   |+..          ..+.....+ .++|..+|..+|++++.. -++.++|+.++|+........+....+... 
T Consensus       479 ~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~  557 (668)
T PLN02260        479 FATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNK  557 (668)
T ss_pred             EcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccce
Confidence            643   2211          111111222 367788999999999875 367788888888532111000000001111 


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI  198 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~  198 (258)
                      .+.++      .+..+++|+..++..+++..  .+++||+++++ .+|+.|+++.+.+.++..+.+..++.+++
T Consensus       558 ~~~vp------~~~~~~~~~~~~~~~l~~~~--~~giyni~~~~-~~s~~e~a~~i~~~~~~~~~~~~~~~~~~  622 (668)
T PLN02260        558 VVNIP------NSMTVLDELLPISIEMAKRN--LRGIWNFTNPG-VVSHNEILEMYKDYIDPGFKWSNFTLEEQ  622 (668)
T ss_pred             eeccC------CCceehhhHHHHHHHHHHhC--CCceEEecCCC-cCcHHHHHHHHHHhcCCcccccccCHHHh
Confidence            12221      23566777887778887643  46899999864 89999999999998853333556666554

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.21  E-value=5.2e-10  Score=83.05  Aligned_cols=153  Identities=20%  Similarity=0.194  Sum_probs=107.0

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------hhchHHHHHHHHHhCCccEEEc-C---CCCCCCCC--CC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------VEDQFKLIAAIKEVGNIKRFFP-T---EYGSNVDA--GH   71 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------~~~~~~li~aa~~~g~vk~~v~-S---~~~~~~~~--~~   71 (258)
                      +++.+++.|+.|++++.+.+.|.|+||+..+...       ......++++.+.+| +.|++. .   |+-.++..  .+
T Consensus        41 ~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD  119 (211)
T COG2910          41 QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDNDELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVD  119 (211)
T ss_pred             ccceeecccccChhhhHhhhcCCceEEEeccCCCCChhHHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeec
Confidence            6788999999999999999999999999987652       455778999999999 998875 3   22222221  11


Q ss_pred             CCCCCccchh-hHHHHH--HHHHh-CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHH
Q 025054           72 PIEPAKSGYA-RKAKIR--RAIEA-EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATY  147 (258)
Q Consensus        72 ~~~~~~~~~~-~k~~~e--~~l~~-~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~  147 (258)
                      ...-+.+|+. .+...|  +.|++ .+++||++-|+.++.++-.. ..+.   +.+..+..-..|   -+.|+..|.|.+
T Consensus       120 ~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGerT-g~yr---lggD~ll~n~~G---~SrIS~aDYAiA  192 (211)
T COG2910         120 TPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGERT-GNYR---LGGDQLLVNAKG---ESRISYADYAIA  192 (211)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCcccc-CceE---eccceEEEcCCC---ceeeeHHHHHHH
Confidence            1112345665 566666  56665 56999999999999884322 2221   222333332233   368899999999


Q ss_pred             HHHHhcCCCCCCceEEEc
Q 025054          148 TIKAVDDPRTLNKTLYLR  165 (258)
Q Consensus       148 ~~~~l~~~~~~~~~~~l~  165 (258)
                      ++.-+++|.+.++.+.+.
T Consensus       193 ~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         193 VLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             HHHHHhcccccceeeeec
Confidence            999999998888877653

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.14  E-value=5.8e-11  Score=95.97  Aligned_cols=144  Identities=16%  Similarity=0.127  Sum_probs=78.9

Q ss_pred             cCceeEEeccCCCH------HHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCC-
Q 025054            4 MINCLIAQGDLHDH------ESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEY-   63 (258)
Q Consensus         4 ~~gv~~~~~D~~d~------~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~-   63 (258)
                      ...++++.||++++      +.+....+.+|+|||+++..+            +.+++++++.|.+.+ .++|++ |+. 
T Consensus        59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~  137 (249)
T PF07993_consen   59 LSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAY  137 (249)
T ss_dssp             TTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGG
T ss_pred             hccEEEEeccccccccCCChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEecccc
Confidence            46799999999864      466666678999999998643            789999999999877 779998 652 


Q ss_pred             -CCCCCCC--------------CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC--C---
Q 025054           64 -GSNVDAG--------------HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA--T---  119 (258)
Q Consensus        64 -~~~~~~~--------------~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~--~---  119 (258)
                       +......              ......+.|..+|..+|+++++    .|++++|+|||.++|.-.+......-  .   
T Consensus       138 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~  217 (249)
T PF07993_consen  138 VAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLL  217 (249)
T ss_dssp             GTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHH
T ss_pred             ccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHH
Confidence             1111100              0112346788899999999986    38999999999999943322111000  0   


Q ss_pred             --CCCCCceE-eccCCCceeeeeccchHHHHH
Q 025054          120 --APPRENIL-FYGDGQPKAIFNKEEDIATYT  148 (258)
Q Consensus       120 --~~~~~~~~-~~g~g~~~~~~v~~~D~a~~~  148 (258)
                        ....+.++ .+++++..++++.++.+|+++
T Consensus       218 ~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  218 RSCIALGAFPDLPGDPDARLDLVPVDYVARAI  249 (249)
T ss_dssp             HHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred             HHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence              00111222 445555679999999999875

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.10  E-value=1.5e-09  Score=89.02  Aligned_cols=172  Identities=19%  Similarity=0.158  Sum_probs=109.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      ++.++++|++|.+++.++++       ++|+|||+++...                   +.+..++++++    ++.+ .
T Consensus        49 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~  127 (276)
T PRK06482         49 RLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-G  127 (276)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            57889999999998887664       5799999987431                   34556777776    5566 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc--
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN--  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~--  125 (258)
                      +++|. |+.+....    .++..+|..+|+.++.+++.       .+++++++|||.+...+................  
T Consensus       128 ~~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~  203 (276)
T PRK06482        128 GRIVQVSSEGGQIA----YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPV  203 (276)
T ss_pred             CEEEEEcCcccccC----CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhh
Confidence            89998 77654322    12345677799999876643       589999999999855443321110000000000  


Q ss_pred             ---eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          126 ---ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       126 ---~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                         .....++.. ..+.+++|++++++.++..+. .+..|++++ ++..+..|+++.+.+.++
T Consensus       204 ~~~~~~~~~~~~-~~~~d~~~~~~a~~~~~~~~~-~~~~~~~g~-~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        204 GDLRRALADGSF-AIPGDPQKMVQAMIASADQTP-APRRLTLGS-DAYASIRAALSERLAALE  263 (276)
T ss_pred             HHHHHHHhhccC-CCCCCHHHHHHHHHHHHcCCC-CCeEEecCh-HHHHHHHHHHHHHHHHHH
Confidence               001111111 124689999999999987653 345677775 557777777776666554

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.06  E-value=1.4e-09  Score=89.18  Aligned_cols=172  Identities=14%  Similarity=0.035  Sum_probs=107.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+.++++|++|.+++.++++       ++|+|||+++...                   +..    .+.++..+++.+ .
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  128 (275)
T PRK08263         50 RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-S  128 (275)
T ss_pred             CeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            46778999999998877655       5799999997531                   222    344444556677 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-  126 (258)
                      +++|. |+.+.....    +....|..+|+.++.+.+.       .|++++++|||.+...+................+ 
T Consensus       129 ~~iv~vsS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~  204 (275)
T PRK08263        129 GHIIQISSIGGISAF----PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLR  204 (275)
T ss_pred             CEEEEEcChhhcCCC----CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHH
Confidence            88888 665443221    1234577799998766532       5899999999988876542110000000000000 


Q ss_pred             EeccCCCceeee-eccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHH
Q 025054          127 LFYGDGQPKAIF-NKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKK  183 (258)
Q Consensus       127 ~~~g~g~~~~~~-v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~  183 (258)
                      ...+.......+ ++++|++++++.+++.+...++.+...++ +.+++.++.+.+.+-
T Consensus       205 ~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  261 (275)
T PRK08263        205 EELAEQWSERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGV-LDLAKADYERRLATW  261 (275)
T ss_pred             HHHHHHHHhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchH-HHHHHHHHHHHHHHH
Confidence            001111112335 89999999999999987655666655553 478888988888773

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.02  E-value=5.3e-09  Score=84.07  Aligned_cols=148  Identities=16%  Similarity=0.117  Sum_probs=98.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      ++.++.+|++|++++.++++       ++|+|||+++...                   +....++++++    ++.+ +
T Consensus        57 ~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  135 (249)
T PRK12825         57 RAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-G  135 (249)
T ss_pred             ceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            47889999999998888775       5799999997421                   12233444444    6677 8


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|. |+.+.....    .....|..+|...+.+++       ..++.++++|||+++++.........   ... .  
T Consensus       136 ~~~i~~SS~~~~~~~----~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~-~--  205 (249)
T PRK12825        136 GRIVNISSVAGLPGW----PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEA---REA-K--  205 (249)
T ss_pred             CEEEEECccccCCCC----CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchh---HHh-h--
Confidence            99998 765543221    123456678988776553       25899999999999997654321110   000 0  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...  .....+++.+|+++++..++.++.  ..|+.+++.|
T Consensus       206 ~~~--~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        206 DAE--TPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             hcc--CCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            000  111238899999999999997652  3588999986

>PRK05875 short chain dehydrogenase; Provisional

Probab=98.97  E-value=1.2e-08  Score=83.65  Aligned_cols=167  Identities=11%  Similarity=0.139  Sum_probs=107.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHH----hCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKE----VGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~----~g~   54 (258)
                      .+.++.+|+.|++++.++++       +.|+|||+++...                    +.....+++++.+    .+ 
T Consensus        59 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  137 (276)
T PRK05875         59 AVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-  137 (276)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            46788999999998887776       6799999997320                    2233445555543    33 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.+++. |+.......    ++..+|..+|+.++.+++.       .++.+++||||.+...+......       ....
T Consensus       138 ~g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-------~~~~  206 (276)
T PRK05875        138 GGSFVGISSIAASNTH----RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-------SPEL  206 (276)
T ss_pred             CcEEEEEechhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-------CHHH
Confidence            357887 665432221    2345677799999988864       47999999999887665432111       0000


Q ss_pred             -EeccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcCCCCcc----CHHHHHHHHHHHhC
Q 025054          127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRPPKNIY----SFKELVALWEKKIG  185 (258)
Q Consensus       127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g~~~~~----t~~e~~~~~~~~~g  185 (258)
                       .-.........+++++|+|+++..+++++..  .++.+++.| +..+    +..|+++.+.+..|
T Consensus       207 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~  271 (276)
T PRK05875        207 SADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDG-GHMLRRGPDFSSMLEPVFGADG  271 (276)
T ss_pred             HHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECC-CeeccCCccHHHHHHHHhhHHH
Confidence             0000011112357899999999999987643  378899986 5565    77777777766554

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.97  E-value=7e-09  Score=84.26  Aligned_cols=155  Identities=10%  Similarity=0.056  Sum_probs=101.2

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hh----chHHHHHHH-HHhCCc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VE----DQFKLIAAI-KEVGNI   55 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~----~~~~li~aa-~~~g~v   55 (258)
                      +.++.+|++|.+++.++++       ++|+|||+++...                   +.    ..+++++++ ++.+ +
T Consensus        58 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~  136 (262)
T PRK13394         58 AIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-G  136 (262)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-C
Confidence            5678999999998887765       3799999997521                   11    256778887 6677 8


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-CCCCCC-CCC--C
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-AQPGAT-APP--R  123 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-~~~~~~-~~~--~  123 (258)
                      +++|+ |+.......    ++...|..+|...+.+++.       .++.++++|||.+++.+.... ...... ...  .
T Consensus       137 ~~iv~~ss~~~~~~~----~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~  212 (262)
T PRK13394        137 GVVIYMGSVHSHEAS----PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEE  212 (262)
T ss_pred             cEEEEEcchhhcCCC----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHH
Confidence            99998 765443221    2244677799988876653       479999999999998654221 110000 000  0


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ....+++.+.....+++++|+++++..++..+.  ..|+.+++.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~  257 (262)
T PRK13394        213 VVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSH  257 (262)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCC
Confidence            001123334455679999999999999987652  2367777764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=98.95  E-value=1.2e-08  Score=82.59  Aligned_cols=156  Identities=13%  Similarity=0.165  Sum_probs=95.8

Q ss_pred             ceeEEeccCCCHHHHHHh-------hCCCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKA-------IKPVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~a-------l~g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+.++.+|+.|.+++..+       +.+.|+|||+++...                   ..+    .+.+++++++.+ +
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~  129 (255)
T TIGR01963        51 SVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-W  129 (255)
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            477899999999955544       456899999997421                   122    233444446677 8


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC--CCCCCCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA--TAPPREN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~--~~~~~~~  125 (258)
                      +++|+ |+.......    +....|..+|..++.+.+.       .++.++++|||++++++.........  .......
T Consensus       130 ~~~v~~ss~~~~~~~----~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~  205 (255)
T TIGR01963       130 GRIINIASAHGLVAS----PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQ  205 (255)
T ss_pred             eEEEEEcchhhcCCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchH
Confidence            89998 654332211    1234566788887766643       48999999999999865322100000  0000000


Q ss_pred             e--EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          126 I--LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       126 ~--~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      .  .....+....++++++|+|++++.++.++ + ..++.|++.|
T Consensus       206 ~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       206 VIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             HHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence            0  01122344567999999999999999875 2 3467788874

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.93  E-value=1.9e-08  Score=81.49  Aligned_cols=156  Identities=13%  Similarity=0.093  Sum_probs=100.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|+.|.+++.++++       ++|+|||+++...                       +...+.++.++++.+ +
T Consensus        54 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  132 (258)
T PRK12429         54 KAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-G  132 (258)
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-C
Confidence            46789999999999888776       5899999997421                       122566777777778 8


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-CCCCC-CCCCCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-QPGAT-APPREN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-~~~~~-~~~~~~  125 (258)
                      ++||+ |+......    .++..+|..+|...+.+.+.       .++.++.+|||++.+++..... ..... ......
T Consensus       133 ~~iv~iss~~~~~~----~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~  208 (258)
T PRK12429        133 GRIINMASVHGLVG----SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEE  208 (258)
T ss_pred             eEEEEEcchhhccC----CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHH
Confidence            99998 66543322    12345666788887755542       5799999999999986543211 00000 000000


Q ss_pred             --eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 --ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 --~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                        ...++.......+++++|+|+++..++.++.  ..|+.|++.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  253 (258)
T PRK12429        209 VLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG  253 (258)
T ss_pred             HHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence              0112222233569999999999999987642  2467788764

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.90  E-value=2.9e-08  Score=83.88  Aligned_cols=154  Identities=18%  Similarity=0.063  Sum_probs=96.3

Q ss_pred             cCceeEEeccCCCHHH-HHHhhC----CCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCC
Q 025054            4 MINCLIAQGDLHDHES-LVKAIK----PVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS   65 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~-l~~al~----g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~   65 (258)
                      ..+...+..|.....+ +.....    +..+|+.+++...            ..+++|+++||+.+| |+||+. |+++.
T Consensus       126 d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~  204 (411)
T KOG1203|consen  126 DLGLQNVEADVVTAIDILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGG  204 (411)
T ss_pred             ccccceeeeccccccchhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecC
Confidence            3455566665543322 222222    3456666665321            578999999999999 999998 88876


Q ss_pred             CCCCCCCCCCCc---cchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccc
Q 025054           66 NVDAGHPIEPAK---SGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEE  142 (258)
Q Consensus        66 ~~~~~~~~~~~~---~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~  142 (258)
                      ..-... .+...   ....+|..+|++++++|+++|+||++.++.+.........    .  .......++.+--.++..
T Consensus       205 ~~~~~~-~~~~~~~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~i~r~  277 (411)
T KOG1203|consen  205 TKFNQP-PNILLLNGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVV----D--DEKELLTVDGGAYSISRL  277 (411)
T ss_pred             cccCCC-chhhhhhhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecc----c--Cccccccccccceeeehh
Confidence            433211 11111   2236899999999999999999999999886654321111    1  111111122222468999


Q ss_pred             hHHHHHHHHhcCCCC-CCceEEEc
Q 025054          143 DIATYTIKAVDDPRT-LNKTLYLR  165 (258)
Q Consensus       143 D~a~~~~~~l~~~~~-~~~~~~l~  165 (258)
                      |+|+..+.++..+.. ..++.++.
T Consensus       278 ~vael~~~all~~~~~~~k~~~~v  301 (411)
T KOG1203|consen  278 DVAELVAKALLNEAATFKKVVELV  301 (411)
T ss_pred             hHHHHHHHHHhhhhhccceeEEee
Confidence            999999999988754 44555554

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.88  E-value=9e-09  Score=79.17  Aligned_cols=159  Identities=14%  Similarity=0.125  Sum_probs=107.3

Q ss_pred             eeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCC
Q 025054            7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPA   76 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~   76 (258)
                      +.+..+|.....-+...+.|...++.+++...         -+...+-+.||+++| |++|++ |.-......   .- .
T Consensus        98 vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d~~~~~---~i-~  172 (283)
T KOG4288|consen   98 VSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNIILMDRINGTANINAVKAAAKAG-VPRFVYISAHDFGLPP---LI-P  172 (283)
T ss_pred             cchhhccccccCcchhhhcCCcccHHHhcCccchHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhhcCCCC---cc-c
Confidence            56667776665567788889999999887643         345677888999999 999999 753221111   11 2


Q ss_pred             ccchhhHHHHHHHHHh-CCCCeEEEecCcccccC--cCCCC---CCCCC-------C-CCCCceEeccCCCceeeeeccc
Q 025054           77 KSGYARKAKIRRAIEA-EGIPHTYVSCNCSFGFF--LPTMA---QPGAT-------A-PPRENILFYGDGQPKAIFNKEE  142 (258)
Q Consensus        77 ~~~~~~k~~~e~~l~~-~~~~~t~lr~~~~~~~~--~~~~~---~~~~~-------~-~~~~~~~~~g~g~~~~~~v~~~  142 (258)
                      ..|+..|.++|..|.. .+..-.++|||.+||.-  .....   ..+..       . ...+++++.|  ..-.+.+.++
T Consensus       173 rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg--~l~~ppvnve  250 (283)
T KOG4288|consen  173 RGYIEGKREAEAELLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLG--PLLAPPVNVE  250 (283)
T ss_pred             hhhhccchHHHHHHHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccc--cccCCCcCHH
Confidence            3799999999988766 67899999999999841  11000   00000       0 1122345554  5667899999


Q ss_pred             hHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHH
Q 025054          143 DIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEK  182 (258)
Q Consensus       143 D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~  182 (258)
                      ++|.++++++++|...         | .+|+.|+.+...|
T Consensus       251 ~VA~aal~ai~dp~f~---------G-vv~i~eI~~~a~k  280 (283)
T KOG4288|consen  251 SVALAALKAIEDPDFK---------G-VVTIEEIKKAAHK  280 (283)
T ss_pred             HHHHHHHHhccCCCcC---------c-eeeHHHHHHHHHH
Confidence            9999999999998522         2 5666677666554

>PRK09291 short chain dehydrogenase; Provisional

Probab=98.88  E-value=2.5e-08  Score=80.82  Aligned_cols=100  Identities=18%  Similarity=0.128  Sum_probs=73.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccEEEc-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKRFFP-   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~~v~-   60 (258)
                      ++.++.+|++|++++.+++. ++|+|||+++...                       +...+.++.++++.+ .+++|. 
T Consensus        52 ~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~  130 (257)
T PRK09291         52 ALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFT  130 (257)
T ss_pred             cceEEEeeCCCHHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence            47889999999999999987 8999999987421                       123455667777778 789998 


Q ss_pred             CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCc
Q 025054           61 TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFL  110 (258)
Q Consensus        61 S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~  110 (258)
                      |+.+.....    +....|..+|..++.+.+       ..|+++++||||++..++.
T Consensus       131 SS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~  183 (257)
T PRK09291        131 SSMAGLITG----PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFN  183 (257)
T ss_pred             cChhhccCC----CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccch
Confidence            765433221    124467779999986543       3689999999999877653

>PRK07074 short chain dehydrogenase; Provisional

Probab=98.87  E-value=3.2e-08  Score=80.24  Aligned_cols=164  Identities=15%  Similarity=0.098  Sum_probs=105.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v   55 (258)
                      +++++.+|+.|.+++.++++       +.|+|||+++...                   +....++++    .+++.+ .
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  128 (257)
T PRK07074         50 RFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-R  128 (257)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            57889999999999988776       4799999997421                   122233344    445556 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|+ |+...... .    ....|..+|+.++.+++.       .++.++.++||++.+........      ....+.
T Consensus       129 ~~iv~~sS~~~~~~-~----~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~  197 (257)
T PRK07074        129 GAVVNIGSVNGMAA-L----GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA------ANPQVF  197 (257)
T ss_pred             eEEEEEcchhhcCC-C----CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc------cChHHH
Confidence            78887 65432211 1    123577799998877754       37999999999888754321100      000000


Q ss_pred             e-ccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcCCCCccCHHHHHHHHHH
Q 025054          128 F-YGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRPPKNIYSFKELVALWEK  182 (258)
Q Consensus       128 ~-~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g~~~~~t~~e~~~~~~~  182 (258)
                      - .........+++++|+++++..++.++ . ..|..+++.| +...+.+|+.+.+..
T Consensus       198 ~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~-g~~~~~~~~~~~~~~  254 (257)
T PRK07074        198 EELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDG-GLTAGNREMARTLTL  254 (257)
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCC-CcCcCChhhhhhhcc
Confidence            0 001122356899999999999999764 2 2467777775 678889999988764

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.86  E-value=1.6e-08  Score=74.68  Aligned_cols=99  Identities=18%  Similarity=0.140  Sum_probs=81.4

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGH   71 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~   71 (258)
                      ..+..+..|++..+.+...++|.|+.|++.+...            -+....++++|++.| ||+|+. |+.|++.+.  
T Consensus        62 k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sS--  138 (238)
T KOG4039|consen   62 KVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSS--  138 (238)
T ss_pred             ceeeeEEechHHHHHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCccc--
Confidence            3466778899889999999999999999987643            244567888999999 999999 999998754  


Q ss_pred             CCCCCccchhhHHHHHHHHHhCCC-CeEEEecCcccccCc
Q 025054           72 PIEPAKSGYARKAKIRRAIEAEGI-PHTYVSCNCSFGFFL  110 (258)
Q Consensus        72 ~~~~~~~~~~~k~~~e~~l~~~~~-~~t~lr~~~~~~~~~  110 (258)
                          ...|...|.++|+.+.+.++ .+.|+|||.+.+.-.
T Consensus       139 ----rFlY~k~KGEvE~~v~eL~F~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  139 ----RFLYMKMKGEVERDVIELDFKHIIILRPGPLLGERT  174 (238)
T ss_pred             ----ceeeeeccchhhhhhhhccccEEEEecCcceecccc
Confidence                34577899999999999887 488999999887543

>PRK06182 short chain dehydrogenase; Validated

Probab=98.86  E-value=3.4e-08  Score=80.87  Aligned_cols=146  Identities=13%  Similarity=0.045  Sum_probs=90.8

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~   54 (258)
                      .+++++.+|++|.+++.++++       ++|+|||+++...                       +...+.++..+++.+ 
T Consensus        46 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-  124 (273)
T PRK06182         46 LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-  124 (273)
T ss_pred             CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-
Confidence            468899999999999888776       7899999997531                       123466777777777 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.+.....    +....|..+|+.++.+.+       ..++++++++||++..++.................
T Consensus       125 ~g~iv~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  200 (273)
T PRK06182        125 SGRIINISSMGGKIYT----PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAY  200 (273)
T ss_pred             CCEEEEEcchhhcCCC----CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccch
Confidence            788988 765432211    112346679999987643       25899999999999876542111000000000000


Q ss_pred             --------EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          127 --------LFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       127 --------~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                              ...........+.+.+|+|++++.++...
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~  237 (273)
T PRK06182        201 AEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTAR  237 (273)
T ss_pred             HHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCC
Confidence                    00001111123568889999888888754

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.84  E-value=7.8e-08  Score=76.85  Aligned_cols=142  Identities=17%  Similarity=0.051  Sum_probs=94.8

Q ss_pred             cCceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhC
Q 025054            4 MINCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVG   53 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g   53 (258)
                      ..+++++.+|+.|.+++.++++       ++|+|||+++...                   .....++++++    ++.+
T Consensus        53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  132 (239)
T PRK12828         53 ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG  132 (239)
T ss_pred             hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC
Confidence            3467888999999998887776       6899999987421                   22334555555    4566


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       ++++|. |+.+.....    ++...|..+|...+.+++.       .++.++++|||++++......            
T Consensus       133 -~~~iv~~sS~~~~~~~----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------  195 (239)
T PRK12828        133 -GGRIVNIGAGAALKAG----PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------------  195 (239)
T ss_pred             -CCEEEEECchHhccCC----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------------
Confidence             889998 765443221    1234566688877666542       589999999999987632210            


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                        .+.  .....+++++|+|+++..++.++.  ..|+.+.+.|
T Consensus       196 --~~~--~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        196 --MPD--ADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDG  234 (239)
T ss_pred             --CCc--hhhhcCCCHHHHHHHHHHHhCcccccccceEEEecC
Confidence              000  011237899999999999998752  2477888876

>PRK07825 short chain dehydrogenase; Provisional

Probab=98.83  E-value=1.2e-07  Score=77.64  Aligned_cols=173  Identities=13%  Similarity=0.092  Sum_probs=108.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|++||+++...                       +...+.++.++++.+ .
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~  129 (273)
T PRK07825         51 LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-R  129 (273)
T ss_pred             cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence            37788999999998766554       5799999987421                       123345556666777 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHH-------HhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAI-------EAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l-------~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+.++.+.       +.+|+.+++|+||++...+....              
T Consensus       130 g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~--------------  191 (273)
T PRK07825        130 GHVVNVASLAGKIPV----PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT--------------  191 (273)
T ss_pred             CEEEEEcCccccCCC----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc--------------
Confidence            88988 765443221    23446777998776543       34689999999998765543211              


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCC---CceEE-EcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHH
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTL---NKTLY-LRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQM  201 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~---~~~~~-l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~  201 (258)
                       .  +....++++.+|+|+.++.++.+++..   +.... ... -..+....+.+.+.+..|....+...+.++-.+.
T Consensus       192 -~--~~~~~~~~~~~~va~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (273)
T PRK07825        192 -G--GAKGFKNVEPEDVAAAIVGTVAKPRPEVRVPRALGPLAQ-AQRLLPRRVREALNRLLGGDRVFLDVDTAARAAY  265 (273)
T ss_pred             -c--cccCCCCCCHHHHHHHHHHHHhCCCCEEeccHHHHHHHH-HHHhCcHHHHHHHHHHhcccceeechhhHHHHHH
Confidence             0  011235789999999999999876321   11000 000 0134456677777777777766666666554443

>PRK07806 short chain dehydrogenase; Provisional

Probab=98.83  E-value=4.1e-08  Score=79.13  Aligned_cols=157  Identities=17%  Similarity=0.103  Sum_probs=100.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------hhchHHHHHHHHHhC-CccEEEc-CCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------VEDQFKLIAAIKEVG-NIKRFFP-TEY   63 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g-~vk~~v~-S~~   63 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...             +.+..++++++...- +-.++|+ |+.
T Consensus        57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~  136 (248)
T PRK07806         57 RASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH  136 (248)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence            36788999999998887765       5899999986421             456778888887642 1247887 664


Q ss_pred             CCCCCCC-CCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCce
Q 025054           64 GSNVDAG-HPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPK  135 (258)
Q Consensus        64 ~~~~~~~-~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  135 (258)
                      +...... ...+...+|..+|+.+|.+++.       .++.+++++|+.+.+++...+....    ..+..  .......
T Consensus       137 ~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~----~~~~~--~~~~~~~  210 (248)
T PRK07806        137 QAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL----NPGAI--EARREAA  210 (248)
T ss_pred             hhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC----CHHHH--HHHHhhh
Confidence            3321111 1112234677799999988765       5789999999877665433211000    00000  0000001


Q ss_pred             eeeeccchHHHHHHHHhcCCCCCCceEEEcCCC
Q 025054          136 AIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPK  168 (258)
Q Consensus       136 ~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~  168 (258)
                      ..+++++|+|++++.+++.+...|+.+++.|+.
T Consensus       211 ~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~  243 (248)
T PRK07806        211 GKLYTVSEFAAEVARAVTAPVPSGHIEYVGGAD  243 (248)
T ss_pred             cccCCHHHHHHHHHHHhhccccCccEEEecCcc
Confidence            258999999999999998765578889998753

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.83  E-value=5.7e-08  Score=78.34  Aligned_cols=150  Identities=15%  Similarity=0.110  Sum_probs=96.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      ++.++.+|++|++++.++++       +.|+|||+++...                   ......+++++    ++.+ .
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  133 (250)
T PRK08063         55 KALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-G  133 (250)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            46788999999998888776       4799999997421                   12233444444    4455 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      ++||+ |+.+.....    ++...|..+|..++.+++.       .++.+++|+||++.......+....      ....
T Consensus       134 g~iv~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~------~~~~  203 (250)
T PRK08063        134 GKIISLSSLGSIRYL----ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNRE------ELLE  203 (250)
T ss_pred             eEEEEEcchhhccCC----CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCch------HHHH
Confidence            79998 776543221    2345677799999988754       5799999999999876543211100      0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+++.+|+|++++.++.++.  ..|+.+++.|
T Consensus       204 ~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  244 (250)
T PRK08063        204 DARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDG  244 (250)
T ss_pred             HHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            00000001136899999999999998753  3478888875

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.80  E-value=2.2e-07  Score=73.95  Aligned_cols=184  Identities=18%  Similarity=0.205  Sum_probs=127.4

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCc--cEEEc-CC--
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNI--KRFFP-TE--   62 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~v--k~~v~-S~--   62 (258)
                      ....++.+|++|...|.++++.  .|-|+|+++.+.               .-++.+|++|.+..| .  -||.. |+  
T Consensus        55 ~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~~~~rfYQAStSE  133 (345)
T COG1089          55 PRLHLHYGDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG-EKKTRFYQASTSE  133 (345)
T ss_pred             ceeEEEeccccchHHHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhC-CcccEEEecccHH
Confidence            4478999999999999999984  589999998653               356789999999877 3  35555 43  


Q ss_pred             -CCCC----CCCCCCCCCCccchhhHHHHHHHH----HhCCCCeEEEecCcccccCcCCCCCCCC-----------CCCC
Q 025054           63 -YGSN----VDAGHPIEPAKSGYARKAKIRRAI----EAEGIPHTYVSCNCSFGFFLPTMAQPGA-----------TAPP  122 (258)
Q Consensus        63 -~~~~----~~~~~~~~~~~~~~~~k~~~e~~l----~~~~~~~t~lr~~~~~~~~~~~~~~~~~-----------~~~~  122 (258)
                       ||..    ..+..+..|.+||..+|.-+--..    .+.|+-.   ..|..|..-.|... ..+           +...
T Consensus       134 ~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~A---cnGILFNHESP~Rg-e~FVTRKIt~ava~Ik~G  209 (345)
T COG1089         134 LYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFA---CNGILFNHESPLRG-ETFVTRKITRAVARIKLG  209 (345)
T ss_pred             hhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCcee---ecceeecCCCCCCc-cceehHHHHHHHHHHHcc
Confidence             4532    223445667888887777665433    3345433   34555543222110 000           0012


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHH
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTED  196 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~  196 (258)
                      ...-...|+-+.+++|=+..|..+++...|.++  .+..|.++. +...|.+|++++..+..|.++.++.-..+
T Consensus       210 ~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~--~PddyViAT-g~t~sVrefv~~Af~~~g~~l~w~g~g~~  280 (345)
T COG1089         210 LQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQE--EPDDYVIAT-GETHSVREFVELAFEMVGIDLEWEGTGVD  280 (345)
T ss_pred             ccceEEeccccccccccchHHHHHHHHHHHccC--CCCceEEec-CceeeHHHHHHHHHHHcCceEEEeecccc
Confidence            223456788999999999999999999999887  466677764 67999999999999999988877654433

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=98.79  E-value=8.9e-08  Score=77.15  Aligned_cols=150  Identities=17%  Similarity=0.105  Sum_probs=96.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|+.|.+++.++++       ++|.|||+++...                   +....++++++    ++.+ .
T Consensus        56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  134 (251)
T PRK12826         56 KARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-G  134 (251)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            37889999999999988886       5899999986531                   22334555555    4566 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|+ |+.+.....   .+...+|..+|..++.+++.       .+++++++|||.++++.........       ...
T Consensus       135 ~~ii~~ss~~~~~~~---~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~-------~~~  204 (251)
T PRK12826        135 GRIVLTSSVAGPRVG---YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ-------WAE  204 (251)
T ss_pred             cEEEEEechHhhccC---CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH-------HHH
Confidence            88887 665443111   12344566799888776653       4899999999999987543211100       000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+++++|+|.++..++..+.  ..|+.+++.|
T Consensus       205 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  245 (251)
T PRK12826        205 AIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVDG  245 (251)
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            00000000147899999999999887653  2478888875

>PRK06138 short chain dehydrogenase; Provisional

Probab=98.77  E-value=1.1e-07  Score=76.73  Aligned_cols=153  Identities=16%  Similarity=0.103  Sum_probs=96.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hh----chHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VE----DQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~----~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.    ..+.++.++++.+ .
T Consensus        54 ~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  132 (252)
T PRK06138         54 RAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-G  132 (252)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-C
Confidence            36889999999999888775       6899999998521                   11    2245556666777 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      ++++. |+.......    +...+|..+|...+.+++.       .++.++.+|||.+.+........ . . .....+.
T Consensus       133 ~~ii~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~-~-~~~~~~~  205 (252)
T PRK06138        133 GSIVNTASQLALAGG----RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFA-R-H-ADPEALR  205 (252)
T ss_pred             eEEEEECChhhccCC----CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhc-c-c-cChHHHH
Confidence            88888 765443221    1245677799988877654       48999999999998765432110 0 0 0000000


Q ss_pred             eccCCCcee-eeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          128 FYGDGQPKA-IFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~-~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      .......+. .+++.+|+|.++..++.++. . .|..+.+.|
T Consensus       206 ~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  247 (252)
T PRK06138        206 EALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDG  247 (252)
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            000111222 27889999999999998763 2 355666653

>PRK08219 short chain dehydrogenase; Provisional

Probab=98.72  E-value=2.3e-07  Score=73.56  Aligned_cols=141  Identities=18%  Similarity=0.118  Sum_probs=90.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~~v   59 (258)
                      +++++.+|++|.+++.++++   ++|+|||+++...                       ....+++++++++.+  +++|
T Consensus        48 ~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v  125 (227)
T PRK08219         48 GATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVV  125 (227)
T ss_pred             cceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEE
Confidence            57899999999999999887   5899999997521                       122455666665554  5677


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CC-CCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EG-IPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG  132 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~-~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  132 (258)
                      + |+.......    ++..+|..+|..++.+++.     .+ ++++.++||.+.+........      .  .    +..
T Consensus       126 ~~ss~~~~~~~----~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~------~--~----~~~  189 (227)
T PRK08219        126 FINSGAGLRAN----PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVA------Q--E----GGE  189 (227)
T ss_pred             EEcchHhcCcC----CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhh------h--h----ccc
Confidence            6 554332211    2245677799988876553     34 899999998766543221110      0  0    000


Q ss_pred             CceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054          133 QPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR  165 (258)
Q Consensus       133 ~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~  165 (258)
                      .....+++++|+|++++.+++.+. .+..+++.
T Consensus       190 ~~~~~~~~~~dva~~~~~~l~~~~-~~~~~~~~  221 (227)
T PRK08219        190 YDPERYLRPETVAKAVRFAVDAPP-DAHITEVV  221 (227)
T ss_pred             cCCCCCCCHHHHHHHHHHHHcCCC-CCccceEE
Confidence            112357999999999999998763 34455443

>PRK06914 short chain dehydrogenase; Provisional

Probab=98.70  E-value=1.5e-07  Score=77.27  Aligned_cols=154  Identities=13%  Similarity=0.132  Sum_probs=93.1

Q ss_pred             ceeEEeccCCCHHHHHH---h---hCCCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVK---A---IKPVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~---a---l~g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~vk   56 (258)
                      .++++.+|++|++++.+   +   +.+.|+|||+++...                   +.+..+++++    +++.+ .+
T Consensus        55 ~~~~~~~D~~d~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~  133 (280)
T PRK06914         55 NIKVQQLDVTDQNSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SG  133 (280)
T ss_pred             ceeEEecCCCCHHHHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CC
Confidence            57889999999988765   1   235799999987421                   2223334444    56666 78


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC-Cce-
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR-ENI-  126 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~-~~~-  126 (258)
                      ++|. |+.+.....    ++..+|..+|..++.+++.       .+++++++|||.+..++.............. ... 
T Consensus       134 ~iv~vsS~~~~~~~----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~  209 (280)
T PRK06914        134 KIINISSISGRVGF----PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYK  209 (280)
T ss_pred             EEEEECcccccCCC----CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchH
Confidence            8887 654332221    2345677799998877653       4899999999999887543211100000000 000 


Q ss_pred             ----EeccC-CCceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054          127 ----LFYGD-GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR  165 (258)
Q Consensus       127 ----~~~g~-g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~  165 (258)
                          .+... ......+++++|+|++++.++.+++. +..|++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~  252 (280)
T PRK06914        210 EYMKKIQKHINSGSDTFGNPIDVANLIVEIAESKRP-KLRYPIG  252 (280)
T ss_pred             HHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCCC-CcccccC
Confidence                00000 01123478999999999999988752 3456665

>PRK12746 short chain dehydrogenase; Provisional

Probab=98.69  E-value=3.5e-07  Score=73.97  Aligned_cols=150  Identities=12%  Similarity=0.119  Sum_probs=94.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------------CCcEEEEccCccc-------------------hhchHHHHHHHHHh-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV-   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~-   52 (258)
                      .+.++.+|++|++++.++++             ++|+|||+++...                   +....++++++... 
T Consensus        57 ~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  136 (254)
T PRK12746         57 KAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLL  136 (254)
T ss_pred             cEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence            36788999999999988776             4899999997521                   23445566666542 


Q ss_pred             -CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           53 -GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        53 -g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                       + ..++|. |+......    .++...|..+|+.++.+.+.       .++.+++++||++.+.+........      
T Consensus       137 ~~-~~~~v~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~------  205 (254)
T PRK12746        137 RA-EGRVINISSAEVRLG----FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDP------  205 (254)
T ss_pred             hc-CCEEEEECCHHhcCC----CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccCh------
Confidence             3 347887 66543221    12345677799998876532       5799999999988776532211000      


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..............+++++|+|+++..++.++.  ..|+.+++.|
T Consensus       206 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        206 EIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             hHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence            000001111112346789999999998887653  2477888874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.68  E-value=1.5e-07  Score=75.49  Aligned_cols=147  Identities=14%  Similarity=0.109  Sum_probs=94.0

Q ss_pred             eeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHH----HHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk   56 (258)
                      +.++.+|+.|++++.+++++       +|+|||+++...                   +....++++++    .+.+ ++
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~  134 (246)
T PRK05653         56 ARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YG  134 (246)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-Cc
Confidence            67788999999988887764       599999996521                   22344555555    4567 88


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.+....    ..+..+|..+|...+...+.       .++.++++|||.+++.....+....   .......+
T Consensus       135 ~ii~~ss~~~~~~----~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~~~~~~  207 (246)
T PRK05653        135 RIVNISSVSGVTG----NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEV---KAEILKEI  207 (246)
T ss_pred             EEEEECcHHhccC----CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHH---HHHHHhcC
Confidence            9997 66543321    12344566688876655433       5899999999999886543211100   00000001


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g  166 (258)
                           ....+++.+|+++++..++...  ...++.+++.|
T Consensus       208 -----~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        208 -----PLGRLGQPEEVANAVAFLASDAASYITGQVIPVNG  242 (246)
T ss_pred             -----CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence                 1134788999999999998753  23577888886

>PRK06180 short chain dehydrogenase; Provisional

Probab=98.68  E-value=3.2e-07  Score=75.26  Aligned_cols=146  Identities=14%  Similarity=0.093  Sum_probs=89.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      ++..+.+|++|.+++.++++       ++|+|||+++...                   +.+..+++++    +++.+ .
T Consensus        51 ~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~  129 (277)
T PRK06180         51 RALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-R  129 (277)
T ss_pred             CeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-C
Confidence            47788999999999888776       4799999998531                   2334455555    34455 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC-Cc-
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR-EN-  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~-~~-  125 (258)
                      +++|. |+.+....    .++...|..+|+.++.+++.       .|++++++|||++..++.............. .. 
T Consensus       130 ~~iv~iSS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  205 (277)
T PRK06180        130 GHIVNITSMGGLIT----MPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDAL  205 (277)
T ss_pred             CEEEEEecccccCC----CCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHH
Confidence            78887 76544322    12345677799988876643       4899999999999876532210000000000 00 


Q ss_pred             eEeccC---CCceeeeeccchHHHHHHHHhcCCC
Q 025054          126 ILFYGD---GQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       126 ~~~~g~---g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      +.....   ......+.+++|+|+++..+++.+.
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~  239 (277)
T PRK06180        206 FGPIRQAREAKSGKQPGDPAKAAQAILAAVESDE  239 (277)
T ss_pred             HHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCCC
Confidence            000000   0011235689999999999998763

>PRK06179 short chain dehydrogenase; Provisional

Probab=98.66  E-value=4.2e-07  Score=74.23  Aligned_cols=102  Identities=18%  Similarity=0.128  Sum_probs=72.7

Q ss_pred             CceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------h----hchHHHHHHHHHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~   54 (258)
                      .+++++.+|++|++++.+++++       .|+|||+++...                   +    ...+.++..+++.+ 
T Consensus        45 ~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-  123 (270)
T PRK06179         45 PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-  123 (270)
T ss_pred             CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            3678999999999999988874       699999998531                   1    22334444467777 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcC
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLP  111 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~  111 (258)
                      .+++|. |+.......    +....|..+|..++.+.+.       .|+++++++||++.+++..
T Consensus       124 ~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~  184 (270)
T PRK06179        124 SGRIINISSVLGFLPA----PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDA  184 (270)
T ss_pred             CceEEEECCccccCCC----CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccc
Confidence            889998 665432221    1234677799998876543       6899999999998887643

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.66  E-value=9.9e-07  Score=75.92  Aligned_cols=178  Identities=15%  Similarity=0.142  Sum_probs=122.4

Q ss_pred             ceeEEeccCCC------HHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054            6 NCLIAQGDLHD------HESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN   66 (258)
Q Consensus         6 gv~~~~~D~~d------~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~   66 (258)
                      .+..+.||..+      ..++....+.+|+|||+|+...            ..+++++++-|++..+.+-+++ |+.-+.
T Consensus        80 Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n  159 (467)
T KOG1221|consen   80 KVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN  159 (467)
T ss_pred             cceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee
Confidence            35667888753      3456667779999999998642            6789999999999777899998 653211


Q ss_pred             CC------C-----C--CC-----------------------CCCCccchhhHHHHHHHHHh--CCCCeEEEecCccccc
Q 025054           67 VD------A-----G--HP-----------------------IEPAKSGYARKAKIRRAIEA--EGIPHTYVSCNCSFGF  108 (258)
Q Consensus        67 ~~------~-----~--~~-----------------------~~~~~~~~~~k~~~e~~l~~--~~~~~t~lr~~~~~~~  108 (258)
                      ..      .     .  .+                       ...++.|.-+|+..|+.+.+  .++|.+|+||+.+...
T Consensus       160 ~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st  239 (467)
T KOG1221|consen  160 CNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITST  239 (467)
T ss_pred             cccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceecc
Confidence            00      0     0  00                       01356677799999999987  5899999999999875


Q ss_pred             CcCCCCCCCCCC-----------CCCCce-EeccCCCceeeeeccchHHHHHHHHhcC--CC---CCCceEEEc-CCCCc
Q 025054          109 FLPTMAQPGATA-----------PPRENI-LFYGDGQPKAIFNKEEDIATYTIKAVDD--PR---TLNKTLYLR-PPKNI  170 (258)
Q Consensus       109 ~~~~~~~~~~~~-----------~~~~~~-~~~g~g~~~~~~v~~~D~a~~~~~~l~~--~~---~~~~~~~l~-g~~~~  170 (258)
                      +-..+  +|+.+           ...+.+ .+.++.+...++|.++.++.++..+.-.  ..   ....+|+++ +..+.
T Consensus       240 ~~EP~--pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np  317 (467)
T KOG1221|consen  240 YKEPF--PGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNP  317 (467)
T ss_pred             ccCCC--CCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCc
Confidence            54332  12211           122222 3456778888999999999998865521  11   124588886 44568


Q ss_pred             cCHHHHHHHHHHHhC
Q 025054          171 YSFKELVALWEKKIG  185 (258)
Q Consensus       171 ~t~~e~~~~~~~~~g  185 (258)
                      +|+.++.+...+..-
T Consensus       318 ~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  318 VTWGDFIELALRYFE  332 (467)
T ss_pred             ccHHHHHHHHHHhcc
Confidence            999999999888764

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=98.65  E-value=1.7e-07  Score=76.04  Aligned_cols=161  Identities=12%  Similarity=0.127  Sum_probs=100.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC----Cc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG----NI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g----~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +....++++++....    .-
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  132 (257)
T PRK07067         53 AAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRG  132 (257)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCC
Confidence            46788999999998887776       5799999987421                   345567777765431    01


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-CC-CCCCC-CC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-PG-ATAPP-RE  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~~-~~~~~-~~  124 (258)
                      .++|+ |+.......    ++...|..+|+.++.+.+.       .++++++|+||.+.+........ .. ..... ..
T Consensus       133 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  208 (257)
T PRK07067        133 GKIINMASQAGRRGE----ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGE  208 (257)
T ss_pred             cEEEEeCCHHhCCCC----CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHH
Confidence            36776 664432221    2345677799998877653       58999999999998865432110 00 00000 00


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY  171 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~  171 (258)
                      ....++.+.....+++.+|+|+++..++.++.  ..|+.+++.| +..+
T Consensus       209 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g-g~~~  256 (257)
T PRK07067        209 KKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDG-GNWM  256 (257)
T ss_pred             HHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecC-CEeC
Confidence            11122223333458899999999999998752  3478888886 4343

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.64  E-value=2.2e-07  Score=77.06  Aligned_cols=106  Identities=13%  Similarity=0.050  Sum_probs=80.7

Q ss_pred             ccCceeEEeccCC------CHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCC
Q 025054            3 YMINCLIAQGDLH------DHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEY   63 (258)
Q Consensus         3 ~~~gv~~~~~D~~------d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~   63 (258)
                      ...+++++-||+.      +...+.+.-..+|.|||.++..+            +.+++.+++.|...+ +|.+.+ |+.
T Consensus        58 ~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsi  136 (382)
T COG3320          58 SADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSI  136 (382)
T ss_pred             hcceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeee
Confidence            3567999999987      45566777778999999997532            788999999998876 898888 765


Q ss_pred             CCCCCC----------------CCCCCCCccchhhHHHHHHHHHh---CCCCeEEEecCcccccC
Q 025054           64 GSNVDA----------------GHPIEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSFGFF  109 (258)
Q Consensus        64 ~~~~~~----------------~~~~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~~~~  109 (258)
                      +.....                ........+|..||..+|..+++   .|++++|+|||++.+..
T Consensus       137 sv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds  201 (382)
T COG3320         137 SVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDS  201 (382)
T ss_pred             eeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccC
Confidence            431110                11122457899999999999987   58999999999999854

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.63  E-value=4.9e-07  Score=72.87  Aligned_cols=152  Identities=17%  Similarity=0.130  Sum_probs=95.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------h----hchHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------V----EDQFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~----~~~~~li~aa~~~g~   54 (258)
                      .+.++.+|+.|++++.++++       +.|+|||+++...                    +    ...+.++.++++.+ 
T Consensus        54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  132 (251)
T PRK07231         54 RAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-  132 (251)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-
Confidence            36789999999999988775       4699999997521                    1    23445555555566 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      .++||. |+.+.....    ++...|..+|...+.+.+.       .++.++.++||++...+........   ......
T Consensus       133 ~~~iv~~sS~~~~~~~----~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~~~~~~  205 (251)
T PRK07231        133 GGAIVNVASTAGLRPR----PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP---TPENRA  205 (251)
T ss_pred             CcEEEEEcChhhcCCC----CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc---ChHHHH
Confidence            788998 766543221    2244566799888766653       3899999999998776543221100   000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      .+. .......+++++|+|+++..++.++. . .|..+.+.|
T Consensus       206 ~~~-~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        206 KFL-ATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVDG  246 (251)
T ss_pred             HHh-cCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence            010 11112346899999999999997653 2 356666654

>PRK12829 short chain dehydrogenase; Provisional

Probab=98.61  E-value=4e-07  Score=73.99  Aligned_cols=156  Identities=13%  Similarity=0.088  Sum_probs=93.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-c-------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-E-------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-~-------------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++.. .                   +....++++++    +..+ 
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-  137 (264)
T PRK12829         59 KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-  137 (264)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-
Confidence            35788999999998887764       689999999854 1                   23344455544    4444 


Q ss_pred             c-cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           55 I-KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        55 v-k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      . ++++. |+......    .+....|..+|...+.+++.       .+++++++|||++++..................
T Consensus       138 ~~~~vv~~ss~~~~~~----~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~  213 (264)
T PRK12829        138 HGGVIIALSSVAGRLG----YPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGL  213 (264)
T ss_pred             CCeEEEEecccccccC----CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCCh
Confidence            5 56666 55433221    11234577799998877654       489999999999988654321100000000000


Q ss_pred             eEecc---CCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcC
Q 025054          126 ILFYG---DGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g---~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g  166 (258)
                      .....   .......+++++|+|+++..++...  ...++.+++.|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~  259 (264)
T PRK12829        214 DEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDG  259 (264)
T ss_pred             hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCC
Confidence            00000   0001124899999999999988653  23577888875

>PRK08017 oxidoreductase; Provisional

Probab=98.61  E-value=5.9e-07  Score=72.67  Aligned_cols=141  Identities=15%  Similarity=0.087  Sum_probs=91.3

Q ss_pred             CceeEEeccCCCHHHHHHhhC--------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhC
Q 025054            5 INCLIAQGDLHDHESLVKAIK--------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVG   53 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g   53 (258)
                      .+++.+.+|+.|.+++.++++        ++|.++|+++...                   +    ...+.+++++++.+
T Consensus        45 ~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~  124 (256)
T PRK08017         45 LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG  124 (256)
T ss_pred             CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence            467889999999887766553        4688999987421                   1    12234677777787


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       .+++|. |+.......    +...+|..+|...+.+.+       ..++++++++||.+...+.......      ...
T Consensus       125 -~~~iv~~ss~~~~~~~----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~------~~~  193 (256)
T PRK08017        125 -EGRIVMTSSVMGLIST----PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT------QSD  193 (256)
T ss_pred             -CCEEEEEcCcccccCC----CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccch------hhc
Confidence             788887 654332211    234567779999987643       3689999999998876654322110      001


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      ..+...+.....+++++|+++++..++..++
T Consensus       194 ~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        194 KPVENPGIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             cchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence            1112223334557999999999999998764

>PRK07775 short chain dehydrogenase; Provisional

Probab=98.60  E-value=4.3e-07  Score=74.44  Aligned_cols=151  Identities=15%  Similarity=0.107  Sum_probs=91.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +....++++++.    +.+ .
T Consensus        60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~  138 (274)
T PRK07775         60 EAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-R  138 (274)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            36678899999999887775       5799999997531                   233344555543    344 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .+||. |+.......    +....|..+|+..+.+++.       .|+.++++|||.+................ .....
T Consensus       139 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~-~~~~~  213 (274)
T PRK07775        139 GDLIFVGSDVALRQR----PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPM-LEDWA  213 (274)
T ss_pred             ceEEEECChHhcCCC----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHH-HHHHH
Confidence            67887 654332211    1234577799999987754       38999999999876543211100000000 00011


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEE
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYL  164 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l  164 (258)
                      .++ +.....+++++|+|+++..+++.+. .+..+++
T Consensus       214 ~~~-~~~~~~~~~~~dva~a~~~~~~~~~-~~~~~~~  248 (274)
T PRK07775        214 KWG-QARHDYFLRASDLARAITFVAETPR-GAHVVNM  248 (274)
T ss_pred             Hhc-ccccccccCHHHHHHHHHHHhcCCC-CCCeeEE
Confidence            111 1223458999999999999998763 3445555

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.58  E-value=1.1e-06  Score=70.45  Aligned_cols=148  Identities=20%  Similarity=0.205  Sum_probs=92.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      .+.++.+|+.|.+++.++++       ++|+|||+++...                   +....++++++.    +.+ .
T Consensus        56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  134 (248)
T PRK05557         56 KALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-S  134 (248)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            46778899999998888765       5799999997521                   223344555554    445 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|+ |+.+.....    +....|..+|...+.+++.       .++.+++++||.+.......... .   .......
T Consensus       135 ~~~v~iss~~~~~~~----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~-~---~~~~~~~  206 (248)
T PRK05557        135 GRIINISSVVGLMGN----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPE-D---VKEAILA  206 (248)
T ss_pred             eEEEEEcccccCcCC----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccCh-H---HHHHHHh
Confidence            78888 665443221    1244577789888766542       58999999999886544322100 0   0000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g  166 (258)
                        .  .....+.+.+|++.++..++...  ...++.+++.|
T Consensus       207 --~--~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~  243 (248)
T PRK05557        207 --Q--IPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNG  243 (248)
T ss_pred             --c--CCCCCCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence              0  01113578999999999888763  23467888875

>PRK05876 short chain dehydrogenase; Provisional

Probab=98.58  E-value=1.8e-06  Score=70.80  Aligned_cols=167  Identities=16%  Similarity=0.031  Sum_probs=99.1

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk   56 (258)
                      +.++.+|++|.+++.++++       ++|+|||+++...                   +.+..++++++    .+.++..
T Consensus        57 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g  136 (275)
T PRK05876         57 VHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGG  136 (275)
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC
Confidence            6678999999998887765       4799999997421                   22334555554    3443235


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHH----H---hCCCCeEEEecCcccccCcCCCCCCCCCC-CCCCceE
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAI----E---AEGIPHTYVSCNCSFGFFLPTMAQPGATA-PPRENIL  127 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l----~---~~~~~~t~lr~~~~~~~~~~~~~~~~~~~-~~~~~~~  127 (258)
                      ++|. |+......    .++...|..+|..++.+.    .   ..++.+++++||.+...+........... .......
T Consensus       137 ~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  212 (275)
T PRK05876        137 HVVFTASFAGLVP----NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTG  212 (275)
T ss_pred             EEEEeCChhhccC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCcccccccccc
Confidence            7887 65433221    123456777998754333    2   25899999999988776543211100000 0011112


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHh
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI  184 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~  184 (258)
                      ..+.......+++++|+|+.++.++..+    +.+.+.+   .....++.+.+.+..
T Consensus       213 ~~~~~~~~~~~~~~~dva~~~~~ai~~~----~~~~~~~---~~~~~~~~~~~~~~~  262 (275)
T PRK05876        213 SPGPLPLQDDNLGVDDIAQLTADAILAN----RLYVLPH---AASRASIRRRFERID  262 (275)
T ss_pred             ccccccccccCCCHHHHHHHHHHHHHcC----CeEEecC---hhhHHHHHHHHHHHH
Confidence            2333344566899999999999998654    3455542   455566666665544

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.56  E-value=1.2e-06  Score=70.71  Aligned_cols=152  Identities=9%  Similarity=-0.016  Sum_probs=94.0

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEEE
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRFF   59 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~v   59 (258)
                      +.++.+|+++.+++.++++       +.|+|||+++...                   +....++++++.+.- ...+||
T Consensus        58 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv  137 (252)
T PRK06077         58 GIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIV  137 (252)
T ss_pred             eEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEE
Confidence            4577899999988877655       6799999998421                   223445556555431 124677


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG  132 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  132 (258)
                      . |+.....    +.++...|..+|+.++.+++.      .++.+.+++||++.+.....+....  ......  .....
T Consensus       138 ~~sS~~~~~----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~--~~~~~~--~~~~~  209 (252)
T PRK06077        138 NIASVAGIR----PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVL--GMSEKE--FAEKF  209 (252)
T ss_pred             EEcchhccC----CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcc--cccHHH--HHHhc
Confidence            7 5543321    122345677799998877764      3688999999988765432211100  000000  00111


Q ss_pred             CceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          133 QPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       133 ~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                      .....+++++|+|+++..++..+...|+.|++.+
T Consensus       210 ~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~  243 (252)
T PRK06077        210 TLMGKILDPEEVAEFVAAILKIESITGQVFVLDS  243 (252)
T ss_pred             CcCCCCCCHHHHHHHHHHHhCccccCCCeEEecC
Confidence            1122579999999999999986655688899885

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.56  E-value=4.9e-07  Score=70.05  Aligned_cols=181  Identities=12%  Similarity=0.110  Sum_probs=121.8

Q ss_pred             EEeccCCCHHHHHHhhC--CCcEEEEccCc------c--------chhchHHHHHHHHHhCCccEEEcCCCCCCCCCC--
Q 025054            9 IAQGDLHDHESLVKAIK--PVDVVISAVGR------T--------EVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAG--   70 (258)
Q Consensus         9 ~~~~D~~d~~~l~~al~--g~d~Vi~~~~~------~--------~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~--   70 (258)
                      ++..|+.|...|.+..-  ..|-+||..+.      .        ++.+..|+++.|++.+ .+.||+|+.|+--...  
T Consensus        91 yIy~DILD~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPSTIGAFGPtSPR  169 (366)
T KOG2774|consen   91 YIYLDILDQKSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPSTIGAFGPTSPR  169 (366)
T ss_pred             chhhhhhccccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeecccccccCCCCCC
Confidence            34567777777777653  46777776432      1        1678899999999999 9999998877632111  


Q ss_pred             CC------CCCCccchhhHHHHHHH---HH-hCCCCeEEEecCcccccCcCCCC--CCC---C-CCCCCCceEeccCCCc
Q 025054           71 HP------IEPAKSGYARKAKIRRA---IE-AEGIPHTYVSCNCSFGFFLPTMA--QPG---A-TAPPRENILFYGDGQP  134 (258)
Q Consensus        71 ~~------~~~~~~~~~~k~~~e~~---l~-~~~~~~t~lr~~~~~~~~~~~~~--~~~---~-~~~~~~~~~~~g~g~~  134 (258)
                      .+      ..|..-|.-+|.-+|-+   .. .-|+++.++|...++.+--+...  .+.   + .++.+++..-+-.++.
T Consensus       170 NPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdt  249 (366)
T KOG2774|consen  170 NPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDT  249 (366)
T ss_pred             CCCCCeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCc
Confidence            00      11233344477766633   22 25899999998777765322211  000   0 1234555666666789


Q ss_pred             eeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHh-CCcceeEe
Q 025054          135 KAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKI-GKTLEKIY  192 (258)
Q Consensus       135 ~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~-g~~~~~~~  192 (258)
                      +.++.+.+|+-+++...+..+  ....+.||++|  -..|..|+++.+.+.. |..+.|..
T Consensus       250 rlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~--~sftpee~~~~~~~~~p~~~i~y~~  308 (366)
T KOG2774|consen  250 RLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTG--FSFTPEEIADAIRRVMPGFEIDYDI  308 (366)
T ss_pred             cCceeehHHHHHHHHHHHhCCHHHhhhheeeece--eccCHHHHHHHHHhhCCCceeeccc
Confidence            999999999999999988876  34678999995  5899999999999987 34455543

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.55  E-value=9.4e-07  Score=70.96  Aligned_cols=151  Identities=14%  Similarity=0.140  Sum_probs=95.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk~~v   59 (258)
                      +++++.+|++|.+++.++++   ++|+|||+++...                   +....++++++.+    .+...++|
T Consensus        54 ~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv  133 (245)
T PRK07060         54 GCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIV  133 (245)
T ss_pred             CCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEE
Confidence            56788999999998888876   4899999997521                   2334455565543    22136788


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD  131 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  131 (258)
                      + |+.......    +....|..+|..++.+++.       .+++++.+|||.+.+++....  +.  ... ....+.. 
T Consensus       134 ~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~--~~--~~~-~~~~~~~-  203 (245)
T PRK07060        134 NVSSQAALVGL----PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEA--WS--DPQ-KSGPMLA-  203 (245)
T ss_pred             EEccHHHcCCC----CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhh--cc--CHH-HHHHHHh-
Confidence            7 665433221    2345677899999887653       479999999999988653211  00  000 0000000 


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ......+++.+|+|+++..++..+.  ..|+.+++.|
T Consensus       204 ~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK07060        204 AIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDG  240 (245)
T ss_pred             cCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECC
Confidence            0111347899999999999998763  2477777764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=98.54  E-value=9.3e-07  Score=71.57  Aligned_cols=149  Identities=14%  Similarity=0.180  Sum_probs=94.5

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk   56 (258)
                      +.++.+|+.|.+++.++++       +.|+|||+++...                   +.+..++++++.+    .+ .+
T Consensus        61 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g  139 (255)
T PRK07523         61 AHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AG  139 (255)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-Ce
Confidence            6778899999998888775       4799999997531                   2334455565543    45 67


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+......    .+....|..+|..++.+.+.       .|+++++|+||.+.+.+........    .  ....
T Consensus       140 ~iv~iss~~~~~~----~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~----~--~~~~  209 (255)
T PRK07523        140 KIINIASVQSALA----RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADP----E--FSAW  209 (255)
T ss_pred             EEEEEccchhccC----CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCH----H--HHHH
Confidence            8888 66543221    12345667799998877653       5899999999998886543211000    0  0000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .........+..++|+|.++..++.+..  -.|+.+++.|
T Consensus       210 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g  249 (255)
T PRK07523        210 LEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVDG  249 (255)
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence            0011111236789999999999997642  2367788875

>PRK05650 short chain dehydrogenase; Provisional

Probab=98.54  E-value=8.5e-07  Score=72.48  Aligned_cols=139  Identities=17%  Similarity=0.148  Sum_probs=88.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|+.|.+++.++++       +.|+|||+++...                       +...+.++..+++.+ .
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  128 (270)
T PRK05650         50 DGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-S  128 (270)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-C
Confidence            46778999999988887765       6899999998531                       122344556667777 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .+....|..+|+..+.+.+.       .++.+++++||.+..++...+....   ..  ...
T Consensus       129 ~~iv~vsS~~~~~~----~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~--~~~  199 (270)
T PRK05650        129 GRIVNIASMAGLMQ----GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPN---PA--MKA  199 (270)
T ss_pred             CEEEEECChhhcCC----CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCc---hh--HHH
Confidence            88887 66543221    12234566799987655432       5899999999999887654321100   00  000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ... ......+++++|+|+.++.++.+.
T Consensus       200 ~~~-~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        200 QVG-KLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHH-HHhhcCCCCHHHHHHHHHHHHhCC
Confidence            000 011224679999999999999764

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.54  E-value=4.1e-06  Score=66.89  Aligned_cols=139  Identities=22%  Similarity=0.188  Sum_probs=91.1

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH---hCCc
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE---VGNI   55 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~---~g~v   55 (258)
                      .++.++.+|+.|.+++.++++       ++|+|||+++...                   +.....+++++..   .+ .
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~  132 (237)
T PRK07326         54 GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-G  132 (237)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-C
Confidence            457889999999998887776       6899999987421                   2223345555543   34 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|. |+......    ......|..+|+.++.+.+.       .+++++++|||++.+++.....      ..     
T Consensus       133 ~~iv~~ss~~~~~~----~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~------~~-----  197 (237)
T PRK07326        133 GYIINISSLAGTNF----FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP------SE-----  197 (237)
T ss_pred             eEEEEECChhhccC----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc------ch-----
Confidence            67887 65433211    12234566788877655543       5899999999998876542210      00     


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC-CCCCceEEEc
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-RTLNKTLYLR  165 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~~~~~~~l~  165 (258)
                            .....++.+|+++++..++..+ ..+...+.+.
T Consensus       198 ------~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~  230 (237)
T PRK07326        198 ------KDAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVR  230 (237)
T ss_pred             ------hhhccCCHHHHHHHHHHHHhCCccccccceEEe
Confidence                  0011378999999999999887 3566666665

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=98.54  E-value=1.1e-06  Score=70.81  Aligned_cols=148  Identities=14%  Similarity=0.140  Sum_probs=95.2

Q ss_pred             ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      .+.++.+|+.|.+++.++++.       .|+|||+++...                   +.....+++++..    .+ .
T Consensus        57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  135 (247)
T PRK12935         57 DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-E  135 (247)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            377799999999998888764       699999998521                   2334455555543    44 4


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|+ |+.......    ++..+|..+|...+.+.+.       .++.+++++||.+...+.....       ......
T Consensus       136 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-------~~~~~~  204 (247)
T PRK12935        136 GRIISISSIIGQAGG----FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP-------EEVRQK  204 (247)
T ss_pred             cEEEEEcchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc-------HHHHHH
Confidence            67887 665332221    2345677899987766543       4899999999988765432210       000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g  166 (258)
                      +. .+.....+.+++|++++++.++.... ..|+.+++.|
T Consensus       205 ~~-~~~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~  243 (247)
T PRK12935        205 IV-AKIPKKRFGQADEIAKGVVYLCRDGAYITGQQLNING  243 (247)
T ss_pred             HH-HhCCCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCC
Confidence            10 11223357899999999999987543 3578888875

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.54  E-value=2.7e-06  Score=68.13  Aligned_cols=130  Identities=16%  Similarity=0.162  Sum_probs=86.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +....++++++    ++.+ .
T Consensus        57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  135 (239)
T PRK07666         57 KVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-S  135 (239)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-C
Confidence            47788999999999888876       7899999987531                   12223444444    3456 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|. |+.......    ++...|..+|..++.+++       ..+++++++|||.+.+.+......      .     
T Consensus       136 ~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~-----  200 (239)
T PRK07666        136 GDIINISSTAGQKGA----AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGL------T-----  200 (239)
T ss_pred             cEEEEEcchhhccCC----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccc------c-----
Confidence            78887 654432221    123456678988776654       258999999999988764322100      0     


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                        .  .....+++.+|+|+++..++..+
T Consensus       201 --~--~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        201 --D--GNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             --c--cCCCCCCCHHHHHHHHHHHHhCC
Confidence              0  01123578999999999999876

>PRK12827 short chain dehydrogenase; Provisional

Probab=98.54  E-value=2.2e-06  Score=68.92  Aligned_cols=146  Identities=14%  Similarity=0.132  Sum_probs=95.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH-----HhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK-----EVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~-----~~g~   54 (258)
                      .+.++.+|+.|.+++.++++       ++|.|||+++...                   .....++++++.     +.+ 
T Consensus        60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-  138 (249)
T PRK12827         60 KALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-  138 (249)
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-
Confidence            46789999999999888774       5899999997521                   344567777776     455 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      .+++|. |+.+.....    ++...|..+|...+.+++.       .+++++++|||++.+.+......      . ..+
T Consensus       139 ~~~iv~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~------~-~~~  207 (249)
T PRK12827        139 GGRIVNIASVAGVRGN----RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP------T-EHL  207 (249)
T ss_pred             CeEEEEECCchhcCCC----CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch------H-HHH
Confidence            778887 665443221    1345677799887766543       48999999999998865332110      0 000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                        ... .....+.+.+|+++++..++.+..  ..++.+.+.|
T Consensus       208 --~~~-~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  246 (249)
T PRK12827        208 --LNP-VPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDG  246 (249)
T ss_pred             --Hhh-CCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence              000 001124588999999999887642  2366777764

>PRK09135 pteridine reductase; Provisional

Probab=98.53  E-value=1.1e-06  Score=70.59  Aligned_cols=154  Identities=15%  Similarity=0.091  Sum_probs=95.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~   57 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+..++++++...  .+-.+
T Consensus        58 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~  137 (249)
T PRK09135         58 SAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGA  137 (249)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeE
Confidence            47789999999999888776       4799999998410                   45667888888542  10134


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      ++. ++....    .+.++...|..+|+.+|.+++.      .++.++++|||++++....... ..   .....  ...
T Consensus       138 ~~~~~~~~~~----~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~-~~---~~~~~--~~~  207 (249)
T PRK09135        138 IVNITDIHAE----RPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSF-DE---EARQA--ILA  207 (249)
T ss_pred             EEEEeChhhc----CCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccC-CH---HHHHH--HHh
Confidence            554 433221    1223456778899999988864      3689999999999986532110 00   00000  000


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCC-CCCCceEEEcCCCCcc
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDP-RTLNKTLYLRPPKNIY  171 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~-~~~~~~~~l~g~~~~~  171 (258)
                       +.....+.+++|+++++..++.+. ...|+.|++.+ +..+
T Consensus       208 -~~~~~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~-g~~~  247 (249)
T PRK09135        208 -RTPLKRIGTPEDIAEAVRFLLADASFITGQILAVDG-GRSL  247 (249)
T ss_pred             -cCCcCCCcCHHHHHHHHHHHcCccccccCcEEEECC-Ceec
Confidence             000011235799999997766543 24678899986 4333

>PRK06194 hypothetical protein; Provisional

Probab=98.53  E-value=4.9e-06  Score=68.54  Aligned_cols=157  Identities=8%  Similarity=0.017  Sum_probs=97.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHH----HHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFK----LIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~----li~aa~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+..+    ++...++++ .
T Consensus        56 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~  134 (287)
T PRK06194         56 EVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA-E  134 (287)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-C
Confidence            36679999999999988876       4799999998531                   122333    333355555 3


Q ss_pred             ------cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCC
Q 025054           56 ------KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGAT  119 (258)
Q Consensus        56 ------k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~  119 (258)
                            .++|. |+.+.....    ++..+|..+|+.++.+.+.         .++.+..+.||.+...+...       
T Consensus       135 ~~~~~~g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~-------  203 (287)
T PRK06194        135 KDPAYEGHIVNTASMAGLLAP----PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS-------  203 (287)
T ss_pred             CCCCCCeEEEEeCChhhccCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc-------
Confidence                  47777 665433221    2345677799999877753         23666777776655443321       


Q ss_pred             CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054          120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       120 ~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                       ...+...+.++|.+.+++++++|........                + .+|..|+++.+.+.++..-.+..
T Consensus       204 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-~~s~~dva~~i~~~~~~~~~~~~  258 (287)
T PRK06194        204 -ERNRPADLANTAPPTRSQLIAQAMSQKAVGS----------------G-KVTAEEVAQLVFDAIRAGRFYIY  258 (287)
T ss_pred             -cccCchhcccCccccchhhHHHHHHHhhhhc----------------c-CCCHHHHHHHHHHHHHcCCeEEE
Confidence             1122345566677777888888877654221                1 26788888888887754433333

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=98.51  E-value=1.5e-06  Score=69.92  Aligned_cols=152  Identities=17%  Similarity=0.199  Sum_probs=93.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v   55 (258)
                      ++.++.+|+.|.+++.++++       +.|+|||+++...                   +....++++    +.++.+ .
T Consensus        53 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  131 (250)
T TIGR03206        53 NAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-A  131 (250)
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            47889999999998888765       5899999997421                   223334444    444666 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-  126 (258)
                      +++|+ |+.+.....    +....|..+|+.++.+.+.       .++++++++||.+++.+........   .....+ 
T Consensus       132 ~~ii~iss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---~~~~~~~  204 (250)
T TIGR03206       132 GRIVNIASDAARVGS----SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA---ENPEKLR  204 (250)
T ss_pred             eEEEEECchhhccCC----CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc---CChHHHH
Confidence            88887 665443221    1234566799887766653       4899999999999887543321100   000000 


Q ss_pred             -EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .+... -....+...+|+|+++..++.++.  -.|+.+.+.|
T Consensus       205 ~~~~~~-~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       205 EAFTRA-IPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSG  246 (250)
T ss_pred             HHHHhc-CCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence             00000 001124578999999999987653  2467888864

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12939 short chain dehydrogenase; Provisional

Probab=98.50  E-value=1.9e-06  Score=69.35  Aligned_cols=149  Identities=16%  Similarity=0.154  Sum_probs=95.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      .++++.+|++|.+++.++++       ++|+|||+++...                   +....++++++..    .+ .
T Consensus        57 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  135 (250)
T PRK12939         57 RAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-R  135 (250)
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            47889999999999888774       6899999997521                   2334455555543    33 4


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.+.....    +....|..+|..++.+++.       .++.++.++||.+..+.......       .....
T Consensus       136 g~iv~isS~~~~~~~----~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~  204 (250)
T PRK12939        136 GRIVNLASDTALWGA----PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-------DERHA  204 (250)
T ss_pred             eEEEEECchhhccCC----CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-------hHHHH
Confidence            58887 664332211    1234567799999877753       47999999999887654322110       00000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ....+.....+++++|+|+++..++..+.  -.|+.+.+.|
T Consensus       205 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g  245 (250)
T PRK12939        205 YYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNG  245 (250)
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            01111222347899999999999998652  3578888875

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=98.50  E-value=2.4e-06  Score=68.89  Aligned_cols=139  Identities=15%  Similarity=0.101  Sum_probs=89.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~   54 (258)
                      ++.++.+|+.|.+++.++++       ++|+|||+++...                        ....+.++.++++.+ 
T Consensus        47 ~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  125 (248)
T PRK10538         47 NLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-  125 (248)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            57788999999998877664       6899999987420                        112456666667777 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.+....    ..+...|..+|..++.+.+.       .++.+++++||.+.+.........+   ......
T Consensus       126 ~~~iv~isS~~~~~~----~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~---~~~~~~  198 (248)
T PRK10538        126 HGHIINIGSTAGSWP----YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG---DDGKAE  198 (248)
T ss_pred             CcEEEEECCcccCCC----CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccC---cHHHHH
Confidence            788887 66544321    12345677799998877654       4799999999998754332110000   000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      ..+ .   ...++..+|+|+++..++..+.
T Consensus       199 ~~~-~---~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        199 KTY-Q---NTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             hhc-c---ccCCCCHHHHHHHHHHHhcCCC
Confidence            011 1   1235789999999999998764

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=98.50  E-value=2.3e-06  Score=66.02  Aligned_cols=100  Identities=11%  Similarity=0.081  Sum_probs=74.1

Q ss_pred             CCCCeEEEecCcccccCcCCCCCCCCC--CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCc
Q 025054           93 EGIPHTYVSCNCSFGFFLPTMAQPGAT--APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNI  170 (258)
Q Consensus        93 ~~~~~t~lr~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~  170 (258)
                      ...+.++||.|.+.|.....+......  .-..+   -.|+|++-++|||++|++..+..+|+++. ..+.+|-..|+ .
T Consensus       170 ~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GG---PlGsG~Q~fpWIHv~DL~~li~~ale~~~-v~GViNgvAP~-~  244 (315)
T KOG3019|consen  170 KDVRVALIRIGVVLGKGGGALAMMILPFQMGAGG---PLGSGQQWFPWIHVDDLVNLIYEALENPS-VKGVINGVAPN-P  244 (315)
T ss_pred             cceeEEEEEEeEEEecCCcchhhhhhhhhhccCC---cCCCCCeeeeeeehHHHHHHHHHHHhcCC-CCceecccCCC-c
Confidence            458999999999998654432221100  00111   24789999999999999999999999974 56678888775 9


Q ss_pred             cCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054          171 YSFKELVALWEKKIGKTLEKIYVTEDQI  198 (258)
Q Consensus       171 ~t~~e~~~~~~~~~g~~~~~~~~~~~~~  198 (258)
                      .+..|+.+.+.++++++. +..+|...+
T Consensus       245 ~~n~Ef~q~lg~aL~Rp~-~~pvP~fvv  271 (315)
T KOG3019|consen  245 VRNGEFCQQLGSALSRPS-WLPVPDFVV  271 (315)
T ss_pred             cchHHHHHHHHHHhCCCc-ccCCcHHHH
Confidence            999999999999999853 446666433

>PRK08324 short chain dehydrogenase; Validated

Probab=98.49  E-value=1.9e-06  Score=79.47  Aligned_cols=156  Identities=17%  Similarity=0.128  Sum_probs=98.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      ++.++.+|++|.+++.++++       +.|+|||+++...                   +.+..++++++    ++.+ .
T Consensus       471 ~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~  549 (681)
T PRK08324        471 RALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-L  549 (681)
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            57789999999998887765       6899999998421                   22344554444    4444 4


Q ss_pred             -cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCccc-ccCc--CCCCCCCC--CCC
Q 025054           56 -KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSF-GFFL--PTMAQPGA--TAP  121 (258)
Q Consensus        56 -k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~-~~~~--~~~~~~~~--~~~  121 (258)
                       .+||. |+.......    +....|..+|+..+.+++.       .++.++.|+|+.++ +...  +.+.....  ...
T Consensus       550 ~g~iV~vsS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~  625 (681)
T PRK08324        550 GGSIVFIASKNAVNPG----PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGL  625 (681)
T ss_pred             CcEEEEECCccccCCC----CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccC
Confidence             57777 665433221    1245677799999988764       36999999999997 4321  11100000  000


Q ss_pred             CCCc-eEeccCCCceeeeeccchHHHHHHHHhcC--CCCCCceEEEcC
Q 025054          122 PREN-ILFYGDGQPKAIFNKEEDIATYTIKAVDD--PRTLNKTLYLRP  166 (258)
Q Consensus       122 ~~~~-~~~~g~g~~~~~~v~~~D~a~~~~~~l~~--~~~~~~~~~l~g  166 (258)
                      .... ...++.++....+++.+|+|+++..++..  ....|+.+++.|
T Consensus       626 ~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        626 SEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             ChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            0000 01234455556789999999999998853  334678898876

>PRK07577 short chain dehydrogenase; Provisional

Probab=98.46  E-value=3.6e-06  Score=67.10  Aligned_cols=149  Identities=17%  Similarity=0.115  Sum_probs=92.8

Q ss_pred             eeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccE
Q 025054            7 CLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKR   57 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~   57 (258)
                      .+++.+|++|.+++.++++      +.|+|||+++...                       ....+.++.++++.+ ..+
T Consensus        43 ~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~  121 (234)
T PRK07577         43 GELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGR  121 (234)
T ss_pred             ceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcE
Confidence            3678899999998887776      6899999987521                       122345566667777 788


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +|. |+.+.. ..    +...+|..+|..++.+.+.       .++.+++|+||.+......... ..   .......+.
T Consensus       122 iv~~sS~~~~-~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~-~~---~~~~~~~~~  192 (234)
T PRK07577        122 IVNICSRAIF-GA----LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTR-PV---GSEEEKRVL  192 (234)
T ss_pred             EEEEcccccc-CC----CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccccc-cc---chhHHHHHh
Confidence            888 665421 11    1245677799998876643       5899999999998876532210 00   000000000


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .. .....+...+|+|.++..++.++.  ..|..+.+.|
T Consensus       193 ~~-~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g  230 (234)
T PRK07577        193 AS-IPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDG  230 (234)
T ss_pred             hc-CCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecC
Confidence            00 000114578999999999997752  2466676664

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.45  E-value=3.6e-06  Score=67.58  Aligned_cols=148  Identities=13%  Similarity=0.122  Sum_probs=91.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +....+++.+    .++.+ .
T Consensus        56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  134 (247)
T PRK05565         56 DAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-S  134 (247)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            47889999999999888776       7899999997531                   1222334444    44455 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|. |+.+.....    +....|..+|...+.+++.       .++.++.++||++.......... ..   .  ...
T Consensus       135 ~~~v~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~-~~---~--~~~  204 (247)
T PRK05565        135 GVIVNISSIWGLIGA----SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE-ED---K--EGL  204 (247)
T ss_pred             cEEEEECCHhhccCC----CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh-HH---H--HHH
Confidence            77887 665433221    1233566688776665543       58999999999887654332110 00   0  000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...  .....+...+|++++++.++....  ..|+.+.+.+
T Consensus       205 ~~~--~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  243 (247)
T PRK05565        205 AEE--IPLGRLGKPEEIAKVVLFLASDDASYITGQIITVDG  243 (247)
T ss_pred             Hhc--CCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecC
Confidence            000  111235688999999999987652  3466777764

>PRK06128 oxidoreductase; Provisional

Probab=98.42  E-value=5.3e-06  Score=68.93  Aligned_cols=150  Identities=17%  Similarity=0.151  Sum_probs=94.0

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHhC-CccEE
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVG-NIKRF   58 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g-~vk~~   58 (258)
                      +.++.+|++|.+++.++++       +.|+|||+++...                    +.+...+++++...- .-.++
T Consensus       108 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~i  187 (300)
T PRK06128        108 AVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASI  187 (300)
T ss_pred             EEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEE
Confidence            5678899999988877664       6899999997421                    334556777775421 02477


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+.......    +....|..+|+.++.+.+.       .|+.++.|+||++.+.+......      ........+
T Consensus       188 v~~sS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~------~~~~~~~~~  257 (300)
T PRK06128        188 INTGSIQSYQPS----PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ------PPEKIPDFG  257 (300)
T ss_pred             EEECCccccCCC----CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC------CHHHHHHHh
Confidence            77 665433211    1234577799999877653       58999999999998875422100      000011111


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .......+...+|+|.++..++.+..  ..|+.+++.|
T Consensus       258 ~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~g  295 (300)
T PRK06128        258 SETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTG  295 (300)
T ss_pred             cCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEeeCC
Confidence            11111235688999999999887653  2477888876

>PRK09186 flagellin modification protein A; Provisional

Probab=98.42  E-value=2.2e-06  Score=69.32  Aligned_cols=148  Identities=14%  Similarity=0.063  Sum_probs=90.7

Q ss_pred             ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc--------------------------hhchHHHHHHHHHh
Q 025054            6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE--------------------------VEDQFKLIAAIKEV   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~--------------------------~~~~~~li~aa~~~   52 (258)
                      .+.++.+|++|++++.++++.       .|+|||+++...                          ....+.++.++++.
T Consensus        56 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  135 (256)
T PRK09186         56 KLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ  135 (256)
T ss_pred             ceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc
Confidence            356779999999998888763       799999985310                          23345666677777


Q ss_pred             CCccEEEc-CCCCCCCCC------CCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC
Q 025054           53 GNIKRFFP-TEYGSNVDA------GHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA  118 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~------~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~  118 (258)
                      + .+++|+ |+.......      .........|..+|...+.+.+.       .++.+++++||.+.+.....+..   
T Consensus       136 ~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~---  211 (256)
T PRK09186        136 G-GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLN---  211 (256)
T ss_pred             C-CceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHH---
Confidence            7 789998 653221110      00011123467799988877642       57999999999876542111000   


Q ss_pred             CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                        .....  .+     ...+++++|+|+++..++++.. . .|+.+.+.|
T Consensus       212 --~~~~~--~~-----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  252 (256)
T PRK09186        212 --AYKKC--CN-----GKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDD  252 (256)
T ss_pred             --HHHhc--CC-----ccCCCCHHHhhhhHhheeccccccccCceEEecC
Confidence              00000  01     1247899999999999998652 2 355666553

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.41  E-value=8e-06  Score=66.02  Aligned_cols=149  Identities=13%  Similarity=0.093  Sum_probs=92.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHHh----C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKEV----G   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~~----g   53 (258)
                      ++.++.+|++|++++.++++       +.|+|||+++...                     +....++++++...    .
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  132 (256)
T PRK12745         53 EVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQP  132 (256)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhcc
Confidence            47889999999988777654       5799999987410                     23345565555332    1


Q ss_pred             C-----ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054           54 N-----IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATA  120 (258)
Q Consensus        54 ~-----vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~  120 (258)
                      +     ++++|+ |+.......    .+...|..+|+.++.+.+.       .++++++++||.+.+........ .   
T Consensus       133 ~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-~---  204 (256)
T PRK12745        133 EPEELPHRSIVFVSSVNAIMVS----PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA-K---  204 (256)
T ss_pred             CcCCCCCcEEEEECChhhccCC----CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch-h---
Confidence            1     456887 665443221    2345677899999876653       57999999999888754322110 0   


Q ss_pred             CCCCceEeccCCCc-eeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          121 PPRENILFYGDGQP-KAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       121 ~~~~~~~~~g~g~~-~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      . ...+.   .+.. ...+.+.+|+++++..++....  ..|+.+++.|
T Consensus       205 ~-~~~~~---~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g  249 (256)
T PRK12745        205 Y-DALIA---KGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDG  249 (256)
T ss_pred             H-Hhhhh---hcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECC
Confidence            0 00000   0000 1236689999999999886542  2477888875

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=98.41  E-value=4.6e-06  Score=67.27  Aligned_cols=156  Identities=14%  Similarity=0.080  Sum_probs=93.9

Q ss_pred             ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+..+++|+.|.+++.+++++       .|+|||+++...                   +.....+++++    ++.+ .
T Consensus        49 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  127 (252)
T PRK08220         49 PFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-S  127 (252)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-C
Confidence            477889999999998887763       799999987531                   22333455554    3445 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC--CCCCCCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA--TAPPREN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~--~~~~~~~  125 (258)
                      .++|. |+.+....    .++...|..+|...+.+.+.       .++.+++++||.+.+.....+.....  .......
T Consensus       128 g~iv~~ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  203 (252)
T PRK08220        128 GAIVTVGSNAAHVP----RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGF  203 (252)
T ss_pred             CEEEEECCchhccC----CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhH
Confidence            67887 66544321    12345577799998877643       57999999999998865432110000  0000000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      ......+.....+++++|+|+++..++.+. . -.++.+.+.|
T Consensus       204 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~g  246 (252)
T PRK08220        204 PEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDG  246 (252)
T ss_pred             HHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECC
Confidence            000001111234789999999999998764 2 2456666654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=98.41  E-value=4.6e-06  Score=67.05  Aligned_cols=147  Identities=15%  Similarity=0.159  Sum_probs=92.7

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +.++.+|+.|.+++.++++       ++|+|||+++...                       +...+.++.++++.+ ..
T Consensus        55 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~  133 (246)
T PRK12938         55 FIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WG  133 (246)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-Ce
Confidence            4566899999988877664       6899999997531                       122455666666777 78


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|...+.+.+.       .++.++.|+||++...+..... .       ..+..
T Consensus       134 ~iv~isS~~~~~~~----~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-~-------~~~~~  201 (246)
T PRK12938        134 RIINISSVNGQKGQ----FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-P-------DVLEK  201 (246)
T ss_pred             EEEEEechhccCCC----CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-h-------HHHHH
Confidence            8887 654332221    1244566799987765543       5899999999988776543210 0       00000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      .........+.+.+|++.++..++.++ . ..+..+.+.|
T Consensus       202 ~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~  241 (246)
T PRK12938        202 IVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNG  241 (246)
T ss_pred             HHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence            001111223568899999999988764 2 3566777764

>PRK07041 short chain dehydrogenase; Provisional

Probab=98.41  E-value=2.6e-06  Score=67.77  Aligned_cols=153  Identities=12%  Similarity=0.025  Sum_probs=95.1

Q ss_pred             CceeEEeccCCCHHHHHHhhCC---CcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEEc-C
Q 025054            5 INCLIAQGDLHDHESLVKAIKP---VDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFFP-T   61 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g---~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v~-S   61 (258)
                      .+++++.+|++|.+++.++++.   +|++||.++...                   +....+++++....+ ..++|. |
T Consensus        45 ~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~s  123 (230)
T PRK07041         45 APVRTAALDITDEAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVS  123 (230)
T ss_pred             CceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEEC
Confidence            3578899999999999998874   699999987421                   223345666555555 678888 6


Q ss_pred             CCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCcee
Q 025054           62 EYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKA  136 (258)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  136 (258)
                      +.+....    .++...|..+|+.++.+.+.     .++..+.++||++-..+........    ....+......-...
T Consensus       124 s~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~----~~~~~~~~~~~~~~~  195 (230)
T PRK07041        124 GFAAVRP----SASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDA----REAMFAAAAERLPAR  195 (230)
T ss_pred             chhhcCC----CCcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccc----hHHHHHHHHhcCCCC
Confidence            6554322    12345677799999888765     3578899999887654432111000    000000000000001


Q ss_pred             eeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          137 IFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       137 ~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                      .+...+|+|+++..++.++...|+.+++.|
T Consensus       196 ~~~~~~dva~~~~~l~~~~~~~G~~~~v~g  225 (230)
T PRK07041        196 RVGQPEDVANAILFLAANGFTTGSTVLVDG  225 (230)
T ss_pred             CCcCHHHHHHHHHHHhcCCCcCCcEEEeCC
Confidence            234679999999999987544578888875

>PRK06181 short chain dehydrogenase; Provisional

Probab=98.40  E-value=7.7e-06  Score=66.46  Aligned_cols=138  Identities=12%  Similarity=0.088  Sum_probs=87.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHH---hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKE---VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~---~g~v   55 (258)
                      ++.++.+|+.|.+++.++++       +.|+|||+++...                    +....++++++..   .+ .
T Consensus        51 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~  129 (263)
T PRK06181         51 EALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-R  129 (263)
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C
Confidence            46788999999998887765       6899999987522                    2233455566532   23 4


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    ++...|..+|..++.+.+.       .++.+++++||++...+.......     . +. .
T Consensus       130 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-----~-~~-~  198 (263)
T PRK06181        130 GQIVVVSSLAGLTGV----PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG-----D-GK-P  198 (263)
T ss_pred             CEEEEEecccccCCC----CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc-----c-cc-c
Confidence            67776 554332211    2245677799998877643       589999999999877654321100     0 00 0


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ....+.....+++++|+|+++..+++..
T Consensus       199 ~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        199 LGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             cccccccccCCCCHHHHHHHHHHHhhCC
Confidence            1111122236899999999999999753

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=98.40  E-value=4.3e-06  Score=67.10  Aligned_cols=148  Identities=20%  Similarity=0.195  Sum_probs=93.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+.++.+|+.|.+++.++++       +.|+|||+++...                   +..    .+.+++++++.+ .
T Consensus        53 ~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  131 (245)
T PRK12824         53 QVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-Y  131 (245)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-C
Confidence            37889999999998888765       4799999997421                   122    334456666667 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.+.....    +....|..+|+.++.+++.       .++.+++++||++.+........        ....
T Consensus       132 ~~iv~iss~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--------~~~~  199 (245)
T PRK12824        132 GRIINISSVNGLKGQ----FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP--------EVLQ  199 (245)
T ss_pred             eEEEEECChhhccCC----CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH--------HHHH
Confidence            88888 665443221    1233566699877766543       47999999999988754322110        0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+...+|+++++..++....  -.|+.+++.|
T Consensus       200 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK12824        200 SIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISING  240 (245)
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence            00000111235678999999988886542  2477888875

>PRK08628 short chain dehydrogenase; Provisional

Probab=98.39  E-value=1.5e-06  Score=70.53  Aligned_cols=162  Identities=10%  Similarity=0.069  Sum_probs=97.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhchHHHHHHHHH---hCCccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VEDQFKLIAAIKE---VGNIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~~~~li~aa~~---~g~vk~   57 (258)
                      ++.++.+|++|.+++.++++       ++|+|||+++...                  +....++..++..   .+ ..+
T Consensus        56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~  134 (258)
T PRK08628         56 RAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGA  134 (258)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcE
Confidence            47789999999999988775       5799999998421                  1222334444432   23 357


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-Ee
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-LF  128 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-~~  128 (258)
                      +|. |+.......    ++...|..+|+.++.+.+.       .++.++.|+||.+++.+...+.. .... ..... .+
T Consensus       135 iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~-~~~~~~~~  208 (258)
T PRK08628        135 IVNISSKTALTGQ----GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIA-TFDD-PEAKLAAI  208 (258)
T ss_pred             EEEECCHHhccCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhh-hccC-HHHHHHHH
Confidence            887 665433221    1244677799999877764       47999999999998865432110 0000 00000 00


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHH
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKEL  176 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~  176 (258)
                      .........+++.+|+|+++..++...  ...|+.+.+.| + ...++++
T Consensus       209 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g-g-~~~~~~~  256 (258)
T PRK08628        209 TAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDG-G-YVHLDRA  256 (258)
T ss_pred             HhcCCccccCCCHHHHHHHHHHHhChhhccccCceEEecC-C-ccccccc
Confidence            000000113678999999999999765  23467777764 3 4555443

>PRK07454 short chain dehydrogenase; Provisional

Probab=98.34  E-value=8.4e-06  Score=65.34  Aligned_cols=132  Identities=13%  Similarity=0.103  Sum_probs=85.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hh----chHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VE----DQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~----~~~~li~aa~~~g~v   55 (258)
                      ++.++.+|++|.+++.++++       ++|+|||+++...                   +.    ..+.++..+++.+ .
T Consensus        56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  134 (241)
T PRK07454         56 KAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-G  134 (241)
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-C
Confidence            57789999999998877765       4799999997421                   12    2334444455565 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .+...+|..+|..++.+.+.       .++++++||||.+.......   ..   ..   ..
T Consensus       135 ~~iv~isS~~~~~~----~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~---~~---~~---~~  201 (241)
T PRK07454        135 GLIINVSSIAARNA----FPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT---ET---VQ---AD  201 (241)
T ss_pred             cEEEEEccHHhCcC----CCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc---cc---cc---cc
Confidence            78887 65543221    12244566799998876542       58999999999876543211   00   00   00


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                       .    ....+++.+|+|+++..++.+++
T Consensus       202 -~----~~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        202 -F----DRSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             -c----ccccCCCHHHHHHHHHHHHcCCc
Confidence             0    11236799999999999998773

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=98.33  E-value=6.2e-06  Score=66.88  Aligned_cols=156  Identities=12%  Similarity=0.058  Sum_probs=91.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +...    +.++..+++.+ .
T Consensus        54 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~  132 (259)
T PRK12384         54 MAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG-I  132 (259)
T ss_pred             eeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-C
Confidence            47889999999988877664       5799999997421                   2222    23344444444 3


Q ss_pred             -cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc-CC-CCCCCC-CCCC-
Q 025054           56 -KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL-PT-MAQPGA-TAPP-  122 (258)
Q Consensus        56 -k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~-~~-~~~~~~-~~~~-  122 (258)
                       .++|+ |+.......    +...+|..+|+..+.+++.       .|+.++.+|||.+++.-. .. +..... .... 
T Consensus       133 ~~~iv~~ss~~~~~~~----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~  208 (259)
T PRK12384        133 QGRIIQINSKSGKVGS----KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKP  208 (259)
T ss_pred             CcEEEEecCcccccCC----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCCh
Confidence             37776 554322211    1234677799987665533       689999999998765321 11 000000 0000 


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ........++.....+++.+|++.++..++.+..  ..|+.+++.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~  254 (259)
T PRK12384        209 DEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTG  254 (259)
T ss_pred             HHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcC
Confidence            0001112222233457899999999999887652  2477888875

>PRK07774 short chain dehydrogenase; Provisional

Probab=98.32  E-value=9.6e-06  Score=65.31  Aligned_cols=146  Identities=12%  Similarity=0.059  Sum_probs=92.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------------------hhchHHHHHHHHH----h
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------------------VEDQFKLIAAIKE----V   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------------------~~~~~~li~aa~~----~   52 (258)
                      ++..+.+|++|.+++.++++       +.|+|||+++...                      +....++++++..    .
T Consensus        56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  135 (250)
T PRK07774         56 TAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR  135 (250)
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Confidence            46678999999998877665       5799999998410                      3344556666654    3


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      + .+++|. |+.+...       +..+|..+|+.++.+++.       .++..++++||.+......... +.      .
T Consensus       136 ~-~~~iv~~sS~~~~~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~------~  200 (250)
T PRK07774        136 G-GGAIVNQSSTAAWL-------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT-PK------E  200 (250)
T ss_pred             C-CcEEEEEecccccC-------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC-CH------H
Confidence            4 468887 6544321       245677899999887754       3789999999988765432210 00      0


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .......+.....+.+++|+++++..++..+.  ..|+.+++.+
T Consensus       201 ~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~  244 (250)
T PRK07774        201 FVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDG  244 (250)
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence            00000000001124578999999999887642  3578888876

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.32  E-value=6.8e-06  Score=65.61  Aligned_cols=147  Identities=14%  Similarity=0.141  Sum_probs=90.9

Q ss_pred             eeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHHHH----hCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk   56 (258)
                      +.++.+|++|.+++.+++++       .|.|||+++...                   +....++++++..    .+ .+
T Consensus        50 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~  128 (239)
T TIGR01830        50 ALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SG  128 (239)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-Ce
Confidence            67889999999998887754       699999998531                   2334556666654    45 67


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++++ |+.+.....    +....|..+|...+.+.+.       .++.+++++||.+.+........ .   .. ..  +
T Consensus       129 ~~v~~sS~~~~~g~----~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~-~---~~-~~--~  197 (239)
T TIGR01830       129 RIINISSVVGLMGN----AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSE-K---VK-KK--I  197 (239)
T ss_pred             EEEEECCccccCCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcCh-H---HH-HH--H
Confidence            8888 665433221    1234566688877665533       58999999999776543221100 0   00 00  0


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+.. ....+.+.+|+++++..++..++  ..|+.+++.+
T Consensus       198 ~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       198 LSQI-PLGRFGTPEEVANAVAFLASDEASYITGQVIHVDG  236 (239)
T ss_pred             HhcC-CcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCC
Confidence            0000 01125688999999998886542  3577888863

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.30  E-value=7.7e-06  Score=65.79  Aligned_cols=150  Identities=14%  Similarity=0.114  Sum_probs=90.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHhC----C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVG----N   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g----~   54 (258)
                      .+.++.+|++|.+++.++++       ..|+|||+++...                    +....++++++...-    +
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  132 (248)
T PRK06123         53 EALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHG  132 (248)
T ss_pred             cEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            36788999999998888776       5799999997531                    223345566654321    0


Q ss_pred             -c-cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           55 -I-KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        55 -v-k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                       . .++|. |+.........   ....|..+|+.++.+++.       .++++++||||.+++.+......+.       
T Consensus       133 ~~~g~iv~~sS~~~~~~~~~---~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~-------  202 (248)
T PRK06123        133 GRGGAIVNVSSMAARLGSPG---EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPG-------  202 (248)
T ss_pred             CCCeEEEEECchhhcCCCCC---CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHH-------
Confidence             1 24666 66543322110   113577899999886643       4899999999999887532211100       


Q ss_pred             ceEeccCCCcee-eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 NILFYGDGQPKA-IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~-~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+.... +..+. -+.+++|++++++.++....  ..|+.+++.|
T Consensus       203 ~~~~~~-~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        203 RVDRVK-AGIPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             HHHHHH-hcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence            000000 00011 12468999999999887642  3577888865

>PRK07109 short chain dehydrogenase; Provisional

Probab=98.30  E-value=1.3e-05  Score=67.58  Aligned_cols=141  Identities=16%  Similarity=0.140  Sum_probs=91.1

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +.++.+|++|.+++.++++       +.|++||+++...                       +...+.++..+++.+ ..
T Consensus        59 ~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g  137 (334)
T PRK07109         59 ALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RG  137 (334)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-Cc
Confidence            6678999999998887754       6899999997421                       223455666667766 67


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.         .++.++.|+||.+...+.......    ..  . 
T Consensus       138 ~iV~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~----~~--~-  206 (334)
T PRK07109        138 AIIQVGSALAYRSI----PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR----LP--V-  206 (334)
T ss_pred             EEEEeCChhhccCC----CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh----cc--c-
Confidence            8887 665443221    1234677799987765432         369999999998876543221000    00  0 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                          ......++.+.+|+|++++.++.++   ++.+++++
T Consensus       207 ----~~~~~~~~~~pe~vA~~i~~~~~~~---~~~~~vg~  239 (334)
T PRK07109        207 ----EPQPVPPIYQPEVVADAILYAAEHP---RRELWVGG  239 (334)
T ss_pred             ----cccCCCCCCCHHHHHHHHHHHHhCC---CcEEEeCc
Confidence                0011124568999999999999875   44566653

>PRK06841 short chain dehydrogenase; Provisional

Probab=98.29  E-value=1.6e-05  Score=64.32  Aligned_cols=149  Identities=18%  Similarity=0.174  Sum_probs=94.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      .+..+.+|+.|.+++.++++       +.|+|||+++...                   +.+..++++++.    +.+ .
T Consensus        62 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  140 (255)
T PRK06841         62 NAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-G  140 (255)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-C
Confidence            45688999999998877765       5799999997521                   234455556554    345 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.+.....    +....|..+|+..+.+.+.       .++.++.|+||++...+...... .   .....  
T Consensus       141 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~---~~~~~--  210 (255)
T PRK06841        141 GKIVNLASQAGVVAL----ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-G---EKGER--  210 (255)
T ss_pred             ceEEEEcchhhccCC----CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-h---hHHHH--
Confidence            78887 665433221    2244677799998766653       47999999999887765322100 0   00000  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .........+.+.+|+|++++.++.++.  -.|+.+.+.|
T Consensus       211 -~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        211 -AKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDG  250 (255)
T ss_pred             -HHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence             0000111236799999999999998753  2467777764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=98.28  E-value=1.1e-05  Score=65.39  Aligned_cols=150  Identities=16%  Similarity=0.148  Sum_probs=93.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~v   55 (258)
                      ++.++.+|++|.+++.++++       ..|+|||+++...                   +    ...+.+++++++.+ .
T Consensus        61 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  139 (256)
T PRK06124         61 AAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-Y  139 (256)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            37889999999998887775       4589999988521                   1    22334445555566 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|..++.+++.       .++.++.|+||.+............    ....  
T Consensus       140 ~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~----~~~~--  209 (256)
T PRK06124        140 GRIIAITSIAGQVAR----AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADP----AVGP--  209 (256)
T ss_pred             cEEEEEeechhccCC----CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccCh----HHHH--
Confidence            78887 665432221    1235677799998877653       4799999999999876532211000    0000  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g  166 (258)
                      ..........+++.+|++.++..++.++..  .|+.+.+.|
T Consensus       210 ~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dg  250 (256)
T PRK06124        210 WLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDG  250 (256)
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECC
Confidence            000000011378899999999999987632  366666654

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.28  E-value=4.4e-06  Score=68.59  Aligned_cols=102  Identities=15%  Similarity=0.063  Sum_probs=73.6

Q ss_pred             cCceeEEeccCCCHHHHHHhhC--------CCcEEEEccCccc-----------------------hhchHHHHHHHHHh
Q 025054            4 MINCLIAQGDLHDHESLVKAIK--------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEV   52 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~   52 (258)
                      ..+++++.+|++|.+++.++++        +.|+|||+++...                       +...+.++.++++.
T Consensus        46 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~  125 (277)
T PRK05993         46 AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ  125 (277)
T ss_pred             HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc
Confidence            3467889999999988877664        4699999986421                       12256788888888


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL  110 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~  110 (258)
                      + ..++|. |+......    .++...|..+|+.++.+.+.       .|+.+++|+||.+...+.
T Consensus       126 ~-~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~  186 (277)
T PRK05993        126 G-QGRIVQCSSILGLVP----MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFR  186 (277)
T ss_pred             C-CCEEEEECChhhcCC----CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence            8 789998 66533221    12345677799999987643       689999999998876553

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=98.27  E-value=1.6e-05  Score=64.50  Aligned_cols=152  Identities=15%  Similarity=0.160  Sum_probs=93.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh-----CC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV-----GN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~-----g~   54 (258)
                      .+.++.+|++|++++.++++       +.|+|||+++...                   +....++++++...     + 
T Consensus        62 ~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-  140 (259)
T PRK08213         62 DALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-  140 (259)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-
Confidence            36689999999998866654       5799999987421                   34556777776544     5 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..+||. |+............+..+|..+|+.++.+++.       .++.++.++||++...+...... .   .. +. 
T Consensus       141 ~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~---~~-~~-  214 (259)
T PRK08213        141 YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE-R---LG-ED-  214 (259)
T ss_pred             CeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH-H---HH-HH-
Confidence            678887 66433222111112335677799999887764       47899999999886544221100 0   00 00 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       +.. .....-+...+|+++.+..++....  ..|+.+.+.|
T Consensus       215 -~~~-~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        215 -LLA-HTPLGRLGDDEDLKGAALLLASDASKHITGQILAVDG  254 (259)
T ss_pred             -HHh-cCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence             000 0001124468999999988887642  2467777764

>PRK12937 short chain dehydrogenase; Provisional

Probab=98.26  E-value=1.6e-05  Score=63.79  Aligned_cols=150  Identities=14%  Similarity=0.109  Sum_probs=92.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~   58 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +....++++++...- .-.++
T Consensus        56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~i  135 (245)
T PRK12937         56 RAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRI  135 (245)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEE
Confidence            36788999999999888876       6899999997421                   234455666665431 12477


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+.+....    .++...|..+|..++.+++.       .++.++.++||++...+.......       .......
T Consensus       136 v~~ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-------~~~~~~~  204 (245)
T PRK12937        136 INLSTSVIALP----LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA-------EQIDQLA  204 (245)
T ss_pred             EEEeeccccCC----CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH-------HHHHHHH
Confidence            77 65543322    12345677799999887754       478999999998766542110000       0000000


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .......+.+.+|+++++..+++++.  ..|..+++.|
T Consensus       205 ~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        205 GLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             hcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeCC
Confidence            00011124578999999999987653  2366677653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=98.24  E-value=2.4e-05  Score=62.76  Aligned_cols=148  Identities=13%  Similarity=0.140  Sum_probs=89.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      +++++.+|++|.+++.++++       +.|+|||+++...                   +....++++++    ++.+ .
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  131 (245)
T PRK12936         53 RVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-Y  131 (245)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-C
Confidence            47788999999998877653       5899999997421                   22333444544    3345 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|+ |+.......    +....|..+|..++.+.+.       .++.++.++||++...+......      .... .
T Consensus       132 ~~iv~~sS~~~~~~~----~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~------~~~~-~  200 (245)
T PRK12936        132 GRIINITSVVGVTGN----PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLND------KQKE-A  200 (245)
T ss_pred             CEEEEECCHHhCcCC----CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccCh------HHHH-H
Confidence            78887 665433221    1234576788877655532       57999999999876544322100      0000 0


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g  166 (258)
                      +.+. .....+.+.+|+++++..++..+..  .|+.+++.|
T Consensus       201 ~~~~-~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK12936        201 IMGA-IPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNG  240 (245)
T ss_pred             HhcC-CCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence            0000 0111256789999999988876432  467788764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=98.24  E-value=1.4e-05  Score=63.88  Aligned_cols=148  Identities=18%  Similarity=0.220  Sum_probs=91.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hh----chHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VE----DQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~----~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|+.|++++.++++       ++|+|||+++...                   +.    ..+.++.++++.+ +
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  129 (242)
T TIGR01829        51 DFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-W  129 (242)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            47789999999988877654       5799999997421                   11    2344556666667 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|. |+.......    .....|..+|...+.+++.       .++.++.++||++.+........ ...    ..  
T Consensus       130 ~~iv~iss~~~~~~~----~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~-~~~----~~--  198 (242)
T TIGR01829       130 GRIINISSVNGQKGQ----FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRE-DVL----NS--  198 (242)
T ss_pred             cEEEEEcchhhcCCC----CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccch-HHH----HH--
Confidence            88887 665432221    1234566689877655543       58999999999998765432110 000    00  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +.. ......+...+|+++++..++.++.  ..|+.+.+.|
T Consensus       199 ~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~g  238 (242)
T TIGR01829       199 IVA-QIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSING  238 (242)
T ss_pred             HHh-cCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence            000 0001124567899999988887652  3477788775

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07904 short chain dehydrogenase; Provisional

Probab=98.24  E-value=2.4e-05  Score=63.30  Aligned_cols=126  Identities=18%  Similarity=0.115  Sum_probs=84.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +++++.+|+.|.+++.++++      +.|++|+.++...                       +...+.++.++++.+ ..
T Consensus        61 ~v~~~~~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~  139 (253)
T PRK07904         61 SVEVIDFDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FG  139 (253)
T ss_pred             ceEEEEecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-Cc
Confidence            57889999999887554443      6899998876531                       122345777888877 78


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHH-------HhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAI-------EAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l-------~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    ++...|..+|+.+..+.       +..++.+++++||++...+....        .  .   
T Consensus       140 ~iv~isS~~g~~~~----~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~--------~--~---  202 (253)
T PRK07904        140 QIIAMSSVAGERVR----RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA--------K--E---  202 (253)
T ss_pred             eEEEEechhhcCCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC--------C--C---
Confidence            9988 665432211    12345777998876443       34689999999999877543210        0  0   


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                        .    ...++.+|+|+.+..++.++
T Consensus       203 --~----~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        203 --A----PLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             --C----CCCCCHHHHHHHHHHHHHcC
Confidence              0    12468999999999999765

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.24  E-value=2.3e-05  Score=61.65  Aligned_cols=140  Identities=18%  Similarity=0.147  Sum_probs=93.2

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +..+..|++|.+++.++++       .+|++||.+|...                       +...+.++-...+.+ --
T Consensus        55 ~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G  133 (246)
T COG4221          55 ALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SG  133 (246)
T ss_pred             eEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-Cc
Confidence            6788999999988555443       6899999998532                       334455666666666 55


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---h----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---A----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|- ||......    ++...-|..+|+.+.....   +    .++++|.|.||.+-+..++.....+  + ..+.-..
T Consensus       134 ~IiN~~SiAG~~~----y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g--~-~~~~~~~  206 (246)
T COG4221         134 HIINLGSIAGRYP----YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG--D-DERADKV  206 (246)
T ss_pred             eEEEecccccccc----CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc--h-hhhHHHH
Confidence            8887 77655432    2335667789999876543   2    5899999999999776555433221  0 0011111


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCCCC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTL  158 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~  158 (258)
                      +    .....+..+|+|+.++.+++.|.+.
T Consensus       207 y----~~~~~l~p~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         207 Y----KGGTALTPEDIAEAVLFAATQPQHV  232 (246)
T ss_pred             h----ccCCCCCHHHHHHHHHHHHhCCCcc
Confidence            1    1135789999999999999999643

>PRK06196 oxidoreductase; Provisional

Probab=98.24  E-value=1.5e-05  Score=66.71  Aligned_cols=145  Identities=13%  Similarity=0.044  Sum_probs=88.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHHhCCccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKEVGNIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~~g~vk~   57 (258)
                      ++.++.+|++|.+++.++++       ++|+|||+++...                     ....+.++.++++.+ ..+
T Consensus        72 ~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~  150 (315)
T PRK06196         72 GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GAR  150 (315)
T ss_pred             hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCe
Confidence            37889999999998877663       6899999997421                     122456666677766 678


Q ss_pred             EEc-CCCCCCCCC--------CCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCC
Q 025054           58 FFP-TEYGSNVDA--------GHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAP  121 (258)
Q Consensus        58 ~v~-S~~~~~~~~--------~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~  121 (258)
                      +|. |+.+.....        ..+.++...|..+|...+.+.+.       .|+.+++++||++.+++...+....   .
T Consensus       151 iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~  227 (315)
T PRK06196        151 VVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREE---Q  227 (315)
T ss_pred             EEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhh---h
Confidence            887 664332110        01112234567799988766532       5899999999999887643221100   0


Q ss_pred             CCCceEeccCCCcee--eeeccchHHHHHHHHhcCCC
Q 025054          122 PRENILFYGDGQPKA--IFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       122 ~~~~~~~~g~g~~~~--~~v~~~D~a~~~~~~l~~~~  156 (258)
                      .  ............  .+.+.+|+|..++.++..+.
T Consensus       228 ~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        228 V--ALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQ  262 (315)
T ss_pred             h--hhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCc
Confidence            0  000000000111  24678999999999987653

>PRK09134 short chain dehydrogenase; Provisional

Probab=98.23  E-value=1.3e-05  Score=64.90  Aligned_cols=153  Identities=13%  Similarity=0.034  Sum_probs=91.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC---Ccc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG---NIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g---~vk   56 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+...+++++....   .-.
T Consensus        60 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  139 (258)
T PRK09134         60 RAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARG  139 (258)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Confidence            47789999999998888775       4799999997421                   334456666554421   024


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      ++|. ++......    .+....|..+|..++.+.+.      .++.++.++||.++.........+     . ......
T Consensus       140 ~iv~~~s~~~~~~----~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~-----~-~~~~~~  209 (258)
T PRK09134        140 LVVNMIDQRVWNL----NPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDF-----A-RQHAAT  209 (258)
T ss_pred             eEEEECchhhcCC----CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHH-----H-HHHhcC
Confidence            5665 43211111    11234677799988876654      248999999998765321110000     0 000000


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCH
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSF  173 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~  173 (258)
                      ..+    ...+++|+|+++..+++.+...|+.+.+.| +..+++
T Consensus       210 ~~~----~~~~~~d~a~~~~~~~~~~~~~g~~~~i~g-g~~~~~  248 (258)
T PRK09134        210 PLG----RGSTPEEIAAAVRYLLDAPSVTGQMIAVDG-GQHLAW  248 (258)
T ss_pred             CCC----CCcCHHHHHHHHHHHhcCCCcCCCEEEECC-Ceeccc
Confidence            001    246799999999999987655677888876 444544

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.23  E-value=3.4e-05  Score=62.56  Aligned_cols=153  Identities=12%  Similarity=0.035  Sum_probs=91.9

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc----c--------------------hhchHHHHHHHHHhCCc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT----E--------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~----~--------------------~~~~~~li~aa~~~g~v   55 (258)
                      +.++.+|++|.+++.++++       +.|++||+++..    .                    +...+.++..+++.+ .
T Consensus        58 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  136 (260)
T PRK12823         58 ALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-G  136 (260)
T ss_pred             EEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            5678899999887776665       579999999631    0                    122345666666666 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC-CCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP-RENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~-~~~~  126 (258)
                      .++|. |+.....      .+..+|..+|+.++.+.+.       .++.++.|+||++++............... ....
T Consensus       137 g~iv~~sS~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  210 (260)
T PRK12823        137 GAIVNVSSIATRG------INRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWY  210 (260)
T ss_pred             CeEEEEcCccccC------CCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccH
Confidence            78887 6643321      1235688899999877654       489999999999987532110000000000 0000


Q ss_pred             E-e---ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 L-F---YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~-~---~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      . +   .-......-+.+++|+|+++..++.+..  -.|+.+++.|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g  256 (260)
T PRK12823        211 QQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGG  256 (260)
T ss_pred             HHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecC
Confidence            0 0   0000011124578999999999987652  2467788764

>PRK07890 short chain dehydrogenase; Provisional

Probab=98.20  E-value=1.2e-05  Score=65.14  Aligned_cols=157  Identities=13%  Similarity=0.085  Sum_probs=92.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHhC--Ccc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVG--NIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g--~vk   56 (258)
                      .+..+.+|++|.+++.++++       +.|+|||+++...                    +.....+++++...-  +..
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  134 (258)
T PRK07890         55 RALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGG  134 (258)
T ss_pred             ceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC
Confidence            36789999999998877664       5799999997421                    223345666665321  124


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-CCCCCC-CCCCCc-
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-AQPGAT-APPREN-  125 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-~~~~~~-~~~~~~-  125 (258)
                      ++|. |+......    .++...|..+|..++.+++.       .++.++.++||.+++...... ...... ...... 
T Consensus       135 ~ii~~sS~~~~~~----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~  210 (258)
T PRK07890        135 SIVMINSMVLRHS----QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQI  210 (258)
T ss_pred             EEEEEechhhccC----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHH
Confidence            7887 66543221    12345677799998877764       479999999999988654321 100000 000000 


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g  166 (258)
                      ....-.......+++++|+++++..++...  .-.|+.+.+.|
T Consensus       211 ~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~g  253 (258)
T PRK07890        211 YAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNC  253 (258)
T ss_pred             HHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCC
Confidence            000000111123678899999999988753  22455665654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=98.19  E-value=9.9e-06  Score=65.05  Aligned_cols=150  Identities=15%  Similarity=0.114  Sum_probs=87.4

Q ss_pred             ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc--------------------hhchHHHHHHHHHh------
Q 025054            6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE--------------------VEDQFKLIAAIKEV------   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~------   52 (258)
                      .+.++.+|+.|++++.++++.       .|+|||+++...                    +.....+++++...      
T Consensus        52 ~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  131 (247)
T PRK09730         52 KAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHG  131 (247)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            367899999999998887763       589999998521                    11222333333221      


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      ++-.+||. |+.........   ...+|..+|+.++.+++.       .+++++.+|||++++++.........      
T Consensus       132 ~~~g~~v~~sS~~~~~~~~~---~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~------  202 (247)
T PRK09730        132 GSGGAIVNVSSAASRLGAPG---EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGR------  202 (247)
T ss_pred             CCCcEEEEECchhhccCCCC---cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHH------
Confidence            11245777 66543322110   123577799998876643       48999999999999875322110000      


Q ss_pred             ceEeccCCCcee-eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 NILFYGDGQPKA-IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~-~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ......  ..+. ...+.+|+|+++..++.++.  ..|..+.+.|
T Consensus       203 ~~~~~~--~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  245 (247)
T PRK09730        203 VDRVKS--NIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAG  245 (247)
T ss_pred             HHHHHh--cCCCCCCcCHHHHHHHHHhhcChhhcCccCcEEecCC
Confidence            000000  0001 12378999999999887642  2455666653

>PRK07069 short chain dehydrogenase; Validated

Probab=98.18  E-value=2.3e-05  Score=63.10  Aligned_cols=150  Identities=11%  Similarity=0.080  Sum_probs=91.6

Q ss_pred             eEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccE
Q 025054            8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKR   57 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~   57 (258)
                      ..+.+|+.|.+++.++++       ++|+|||+++...                       +...++++.++++.+ .++
T Consensus        54 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~  132 (251)
T PRK07069         54 FAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PAS  132 (251)
T ss_pred             EEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcE
Confidence            457889999998877664       5799999997531                       125567778888777 789


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------C--CCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------E--GIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~--~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +|. |+.......    +....|..+|...+.+.+.       .  ++.++.++||++.+.+...... . .... ....
T Consensus       133 ii~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~-~~~~-~~~~  205 (251)
T PRK07069        133 IVNISSVAAFKAE----PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQ-R-LGEE-EATR  205 (251)
T ss_pred             EEEecChhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhh-h-ccch-hHHH
Confidence            998 665432221    1234566799988876653       2  4788999999888765432110 0 0000 0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEc
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLR  165 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~  165 (258)
                      ....+.....+.+.+|+++++..++..+.  ..|..+.+.
T Consensus       206 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~  245 (251)
T PRK07069        206 KLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGAELVID  245 (251)
T ss_pred             HHhccCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence            01011111235688999999999887652  235555554

>PRK07024 short chain dehydrogenase; Provisional

Probab=98.16  E-value=5e-05  Score=61.52  Aligned_cols=127  Identities=15%  Similarity=0.103  Sum_probs=84.0

Q ss_pred             ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc--------------------hhch----HHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE--------------------VEDQ----FKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~--------------------~~~~----~~li~aa~~~g~   54 (258)
                      .+.++.+|++|++++.++++.       .|++||+++...                    +.+.    +.++.++++.+ 
T Consensus        51 ~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-  129 (257)
T PRK07024         51 RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-  129 (257)
T ss_pred             eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-
Confidence            578899999999998887653       699999987421                    1222    33455666676 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.......    +....|..+|+.++.+.+.       .+++++.++||.+.+......           ..
T Consensus       130 ~~~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------~~  194 (257)
T PRK07024        130 RGTLVGIASVAGVRGL----PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-----------PY  194 (257)
T ss_pred             CCEEEEEechhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-----------CC
Confidence            678886 554332211    1234577799999877633       589999999999876542210           00


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                         ..   + .+++.+|+++.+..++.+.
T Consensus       195 ---~~---~-~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        195 ---PM---P-FLMDADRFAARAARAIARG  216 (257)
T ss_pred             ---CC---C-CccCHHHHHHHHHHHHhCC
Confidence               00   0 1367999999999998754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=98.16  E-value=4.1e-05  Score=62.35  Aligned_cols=154  Identities=14%  Similarity=0.152  Sum_probs=93.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                       +...+.++..+++.+ .
T Consensus        60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  138 (265)
T PRK07097         60 EAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-H  138 (265)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-C
Confidence            36788999999998888775       4799999998521                       112234455555556 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-  126 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .++.++.|+||.+.............. .....+ 
T Consensus       139 g~iv~isS~~~~~~~----~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~  213 (265)
T PRK07097        139 GKIINICSMMSELGR----ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQAD-GSRHPFD  213 (265)
T ss_pred             cEEEEEcCccccCCC----CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcccc-ccchhHH
Confidence            78887 654332221    2345677799998877654       489999999999987654321110000 000000 


Q ss_pred             -EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                       .+... .....+...+|+|..+..++.++ . ..|+.+.+.|
T Consensus       214 ~~~~~~-~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g  255 (265)
T PRK07097        214 QFIIAK-TPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDG  255 (265)
T ss_pred             HHHHhc-CCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence             00000 00113567899999999999874 2 2466666654

>PRK08264 short chain dehydrogenase; Validated

Probab=98.16  E-value=6.7e-05  Score=59.94  Aligned_cols=125  Identities=18%  Similarity=0.054  Sum_probs=83.6

Q ss_pred             CceeEEeccCCCHHHHHHhhC---CCcEEEEccCc-cc-------------------hhchHHHHHHH----HHhCCccE
Q 025054            5 INCLIAQGDLHDHESLVKAIK---PVDVVISAVGR-TE-------------------VEDQFKLIAAI----KEVGNIKR   57 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~-~~-------------------~~~~~~li~aa----~~~g~vk~   57 (258)
                      .++.++.+|+.|.+++.++++   .+|+|||+++. ..                   +....++++++    ++.+ ..+
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~  127 (238)
T PRK08264         49 PRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGA  127 (238)
T ss_pred             CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCE
Confidence            357889999999999888876   47999999986 21                   23344555554    3455 678


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +|. |+......    .++...|..+|..++.+.+.       .+++++++|||.+.......                 
T Consensus       128 ~v~~sS~~~~~~----~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~-----------------  186 (238)
T PRK08264        128 IVNVLSVLSWVN----FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG-----------------  186 (238)
T ss_pred             EEEEcChhhccC----CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc-----------------
Confidence            887 65443221    12345677799999866653       48999999998765432110                 


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ..    ...++.+|+++.+...+...
T Consensus       187 ~~----~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        187 LD----APKASPADVARQILDALEAG  208 (238)
T ss_pred             CC----cCCCCHHHHHHHHHHHHhCC
Confidence            00    12577889999999888754

>PRK12743 oxidoreductase; Provisional

Probab=98.16  E-value=3.3e-05  Score=62.54  Aligned_cols=149  Identities=17%  Similarity=0.085  Sum_probs=91.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      .+.++.+|++|.+++.++++       ..|+|||+++...                   +.....+++++..    .++-
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  132 (256)
T PRK12743         53 RAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQG  132 (256)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            37788999999988777664       5799999987421                   2334455555543    2212


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .++...|..+|+.++.+++.       .++.++.|+||.+...+...... .   ..  ...
T Consensus       133 g~ii~isS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~-~---~~--~~~  202 (256)
T PRK12743        133 GRIINITSVHEHTP----LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS-D---VK--PDS  202 (256)
T ss_pred             eEEEEEeeccccCC----CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh-H---HH--HHH
Confidence            47887 66543322    12345677799998877653       47999999999988765322100 0   00  000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..+..  ...+.+.+|++.++..++....  ..|..+.+.|
T Consensus       203 ~~~~~--~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  241 (256)
T PRK12743        203 RPGIP--LGRPGDTHEIASLVAWLCSEGASYTTGQSLIVDG  241 (256)
T ss_pred             HhcCC--CCCCCCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            00000  0124588999999999887653  2467777765

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=98.15  E-value=2.8e-05  Score=63.04  Aligned_cols=150  Identities=13%  Similarity=0.081  Sum_probs=92.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|+.|.+++.++++       +.|++||+++...                       +...+.++..+++.+ .
T Consensus        64 ~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  142 (258)
T PRK06935         64 KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-S  142 (258)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-C
Confidence            47789999999998888776       6799999987421                       122344445555566 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|+ |+.......    +....|..+|+.++.+.+.       .|+.++.|+||++...........     ......
T Consensus       143 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-----~~~~~~  213 (258)
T PRK06935        143 GKIINIASMLSFQGG----KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-----KNRNDE  213 (258)
T ss_pred             eEEEEECCHHhccCC----CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-----hHHHHH
Confidence            78887 665432211    1234677799999877654       479999999998876543221100     000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +... .....+...+|+|..+..++.+..  -.|.++.+-|
T Consensus       214 ~~~~-~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  253 (258)
T PRK06935        214 ILKR-IPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDG  253 (258)
T ss_pred             HHhc-CCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence            0000 001236788999999999887642  2466777654

>PRK07814 short chain dehydrogenase; Provisional

Probab=98.15  E-value=4.9e-05  Score=61.85  Aligned_cols=150  Identities=17%  Similarity=0.096  Sum_probs=92.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH-----hCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE-----VGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~-----~g~   54 (258)
                      ++.++.+|++|++++.++++       ++|+|||+++...                   +....++++++..     .+ 
T Consensus        60 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-  138 (263)
T PRK07814         60 RAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-  138 (263)
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-
Confidence            47788999999999887765       6799999987421                   3445566666653     34 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      ..++|. |+......    .++..+|..+|+.++.+.+.      .++.++.|+||.+...........     ..-.-.
T Consensus       139 ~g~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-----~~~~~~  209 (263)
T PRK07814        139 GGSVINISSTMGRLA----GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAN-----DELRAP  209 (263)
T ss_pred             CeEEEEEccccccCC----CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCC-----HHHHHH
Confidence            567887 65443221    12345678899999887764      357889999998765543221100     000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      +.+. .....+.+.+|+|++++.++.+. . ..++.+.+.|
T Consensus       210 ~~~~-~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  249 (263)
T PRK07814        210 MEKA-TPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDG  249 (263)
T ss_pred             HHhc-CCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence            1111 01122468899999999998764 2 3466666653

>PLN02253 xanthoxin dehydrogenase

Probab=98.14  E-value=3.8e-05  Score=63.03  Aligned_cols=154  Identities=14%  Similarity=0.137  Sum_probs=91.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHH----hC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKE----VG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~----~g   53 (258)
                      ++.++.+|++|.+++.++++       ++|+|||+++...                     +.+..++++++..    .+
T Consensus        67 ~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~  146 (280)
T PLN02253         67 NVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK  146 (280)
T ss_pred             ceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence            47889999999999988776       6899999987421                     2233455555543    22


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       -.++|. |+.......    +....|..+|+.++.+.+.       .++.+..++||.+............ . .....
T Consensus       147 -~g~ii~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~-~~~~~  219 (280)
T PLN02253        147 -KGSIVSLCSVASAIGG----LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPED-E-RTEDA  219 (280)
T ss_pred             -CceEEEecChhhcccC----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccc-c-chhhh
Confidence             235665 554332211    1234677899999887754       4799999999988765422110000 0 00000


Q ss_pred             e----EeccCCC-ceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 I----LFYGDGQ-PKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~----~~~g~g~-~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +    ....... .....++.+|+|.++..++.+..  -.|..+.+.|
T Consensus       220 ~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
T PLN02253        220 LAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDG  267 (280)
T ss_pred             hhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECC
Confidence            0    0001000 01124789999999999987652  2467778875

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.14  E-value=3.1e-05  Score=62.67  Aligned_cols=153  Identities=14%  Similarity=0.095  Sum_probs=91.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      ++.++.+|++|++++.++++       +.|+|||+++...                   +.+    .+.++...++.+ .
T Consensus        52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~  130 (255)
T PRK06463         52 GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-N  130 (255)
T ss_pred             CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-C
Confidence            57889999999998888765       5799999997521                   122    355555555555 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-  126 (258)
                      .++|. |+.......   .+....|..+|+.++.+.+.       .++.++.|+||++-..+.......    ...... 
T Consensus       131 g~iv~isS~~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~  203 (255)
T PRK06463        131 GAIVNIASNAGIGTA---AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQ----EEAEKLR  203 (255)
T ss_pred             cEEEEEcCHHhCCCC---CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCc----cchHHHH
Confidence            68887 554322111   11234566799998877654       479999999998765443211000    000000 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...........+.+.+|+|+++..++.++.  -.|..+.+.|
T Consensus       204 ~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg  245 (255)
T PRK06463        204 ELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADG  245 (255)
T ss_pred             HHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence            000011111225689999999999987653  2466777754

>PRK06701 short chain dehydrogenase; Provisional

Probab=98.14  E-value=4.8e-05  Score=62.90  Aligned_cols=149  Identities=15%  Similarity=0.182  Sum_probs=93.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHh--CCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEV--GNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~--g~vk   56 (258)
                      .+.++.+|+.|.+++.++++       ++|+|||+++...                    +....++++++...  . -.
T Consensus        97 ~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-~g  175 (290)
T PRK06701         97 KCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-GS  175 (290)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-CC
Confidence            36688999999998887765       5799999987421                    23455666666542  2 24


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|..++.+.+.       .+++++.|+||.+...+......       ...+..
T Consensus       176 ~iV~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~-------~~~~~~  244 (290)
T PRK06701        176 AIINTGSITGYEGN----ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD-------EEKVSQ  244 (290)
T ss_pred             eEEEEecccccCCC----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC-------HHHHHH
Confidence            7777 654432221    1234566799998876653       48999999999887764332100       000000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+.......+.+.+|+|+++..++.+..  ..|..+.+.|
T Consensus       245 ~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idg  284 (290)
T PRK06701        245 FGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNG  284 (290)
T ss_pred             HHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence            1111112336789999999999998752  2466777764

>PRK08251 short chain dehydrogenase; Provisional

Probab=98.13  E-value=6.9e-05  Score=60.27  Aligned_cols=127  Identities=14%  Similarity=0.105  Sum_probs=82.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +....++++    ..++.+ .
T Consensus        54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  132 (248)
T PRK08251         54 KVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-S  132 (248)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            47788999999988876654       6899999997421                   122233333    344556 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|. |+........   .+...|..+|+.++.+.+.       .++.++.++||++........        .     
T Consensus       133 ~~iv~~sS~~~~~~~~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~--------~-----  196 (248)
T PRK08251        133 GHLVLISSVSAVRGLP---GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA--------K-----  196 (248)
T ss_pred             CeEEEEeccccccCCC---CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc--------c-----
Confidence            78887 6654332211   1134577799988766643       478999999998765432210        0     


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                           . ....++.+|.++.+.++++..
T Consensus       197 -----~-~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        197 -----S-TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             -----c-CCccCCHHHHHHHHHHHHhcC
Confidence                 0 112567899999999998754

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=98.12  E-value=4.7e-05  Score=61.51  Aligned_cols=150  Identities=11%  Similarity=0.129  Sum_probs=91.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      .+..+.+|++|.+++.++++       +.|+|||+++...                   +.....++++    +++.+ .
T Consensus        59 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  137 (254)
T PRK08085         59 KAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-A  137 (254)
T ss_pred             eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            35678899999998887664       4799999997421                   1222333443    33445 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.++.|+||++...........     .. ...
T Consensus       138 ~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~-----~~-~~~  207 (254)
T PRK08085        138 GKIINICSMQSELGR----DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED-----EA-FTA  207 (254)
T ss_pred             cEEEEEccchhccCC----CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC-----HH-HHH
Confidence            78887 665432221    2345677799998877764       489999999998887654321110     00 000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g  166 (258)
                      ..........+...+|+|.++..++.+. .. .|..+.+-|
T Consensus       208 ~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg  248 (254)
T PRK08085        208 WLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDG  248 (254)
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            0000011123678999999999998864 22 356666654

>PRK12744 short chain dehydrogenase; Provisional

Probab=98.11  E-value=9e-05  Score=60.01  Aligned_cols=154  Identities=18%  Similarity=0.097  Sum_probs=89.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~   58 (258)
                      .++++.+|++|++++.++++       +.|++||+++...                   +.+...++.++...- .-.++
T Consensus        62 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~i  141 (257)
T PRK12744         62 KAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKI  141 (257)
T ss_pred             cEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCE
Confidence            46778999999999887765       5799999998521                   223344555554320 01233


Q ss_pred             E--cCCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           59 F--PTEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        59 v--~S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +  .|+......     +....|..+|+.++.+.+.       .+++++.++||.+...+.............. . ...
T Consensus       142 v~~~ss~~~~~~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~-~~~  214 (257)
T PRK12744        142 VTLVTSLLGAFT-----PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHK-T-AAA  214 (257)
T ss_pred             EEEecchhcccC-----CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhccc-c-ccc
Confidence            3  233322111     1234577799999988764       3799999999999876432211111000000 0 000


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCCC-CCceEEEcC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPRT-LNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~~-~~~~~~l~g  166 (258)
                      ........+.+.+|+|+++..+++.... .|+.+++.|
T Consensus       215 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~g  252 (257)
T PRK12744        215 LSPFSKTGLTDIEDIVPFIRFLVTDGWWITGQTILING  252 (257)
T ss_pred             ccccccCCCCCHHHHHHHHHHhhcccceeecceEeecC
Confidence            1111112477899999999999985322 367777764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=98.10  E-value=5.4e-05  Score=60.88  Aligned_cols=151  Identities=16%  Similarity=0.137  Sum_probs=90.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.....+++++..    .+..
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  132 (248)
T TIGR01832        53 RFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRG  132 (248)
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence            36789999999998876654       5899999987521                   2233445555532    2213


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .++.++.|+||++.......+...    ... ...
T Consensus       133 g~iv~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~-~~~  203 (248)
T TIGR01832       133 GKIINIASMLSFQGG----IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD----EDR-NAA  203 (248)
T ss_pred             eEEEEEecHHhccCC----CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC----hHH-HHH
Confidence            47776 554322111    1234577799999877754       479999999998877643221100    000 000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +... .....+++.+|+|+++..++++..  ..|+.+.+.|
T Consensus       204 ~~~~-~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  243 (248)
T TIGR01832       204 ILER-IPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDG  243 (248)
T ss_pred             HHhc-CCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence            0000 011247899999999999998643  2366666654

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06398 aldose dehydrogenase; Validated

Probab=98.10  E-value=8.7e-05  Score=60.23  Aligned_cols=156  Identities=15%  Similarity=0.114  Sum_probs=92.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|+|||+++...                   +.+...+++++    ++.+ .
T Consensus        45 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  123 (258)
T PRK06398         45 DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-K  123 (258)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            46788999999998887765       5899999987421                   22333444444    4455 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCC-CCCC--CCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGA-TAPP--REN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~--~~~  125 (258)
                      .++|. |+......    .+....|..+|+.++.+.+.      .++.++.|+||++...+......... ....  ...
T Consensus       124 g~iv~isS~~~~~~----~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~  199 (258)
T PRK06398        124 GVIINIASVQSFAV----TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERK  199 (258)
T ss_pred             eEEEEeCcchhccC----CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHH
Confidence            78887 66543321    12345677799999887764      24889999999887654322110000 0000  000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...++.......+...+|+|+++..++....  ..|+.+.+.|
T Consensus       200 ~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dg  242 (258)
T PRK06398        200 IREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDG  242 (258)
T ss_pred             HHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence            0001111111135688999999999987642  2466666654

>PRK08643 acetoin reductase; Validated

Probab=98.09  E-value=7e-05  Score=60.56  Aligned_cols=156  Identities=19%  Similarity=0.199  Sum_probs=88.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      ++.++.+|++|++++.++++       +.|+|||+++...                   +.....+++++    ++.+.-
T Consensus        52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  131 (256)
T PRK08643         52 KAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHG  131 (256)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            46778999999998877665       5799999997521                   12222233333    333212


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-CCCCC-CCCC-
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-PGATA-PPRE-  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~~~~~-~~~~-  124 (258)
                      .++|. |+.......    +....|..+|..++.+.+.       .|+.++.|+||++...+...... ..... .... 
T Consensus       132 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  207 (256)
T PRK08643        132 GKIINATSQAGVVGN----PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEW  207 (256)
T ss_pred             CEEEEECccccccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchH
Confidence            46666 665433221    1234677799988766643       57999999999987755322110 00000 0000 


Q ss_pred             -ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 -NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 -~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       ...+...-. ...+.+.+|+|.++..++.+..  -.|..+.+-|
T Consensus       208 ~~~~~~~~~~-~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdg  251 (256)
T PRK08643        208 GMEQFAKDIT-LGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDG  251 (256)
T ss_pred             HHHHHhccCC-CCCCcCHHHHHHHHHHHhCccccCccCcEEEeCC
Confidence             000000000 1125688999999999987652  3456666653

>PRK07856 short chain dehydrogenase; Provisional

Probab=98.06  E-value=5.4e-05  Score=61.11  Aligned_cols=151  Identities=13%  Similarity=0.050  Sum_probs=91.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      +++++.+|+.|.+++.++++       +.|+|||+++...                   +.....+++++..    .+..
T Consensus        48 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  127 (252)
T PRK07856         48 PAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGG  127 (252)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            57889999999998888775       3599999987421                   2334455555533    2114


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      .++|. |+.......    +....|..+|+.++.+++.      ..+.+..|+||.+.........  .    .......
T Consensus       128 g~ii~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~--~----~~~~~~~  197 (252)
T PRK07856        128 GSIVNIGSVSGRRPS----PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHY--G----DAEGIAA  197 (252)
T ss_pred             cEEEEEcccccCCCC----CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhc--c----CHHHHHH
Confidence            57887 665443221    2345677799999988764      2378889999988765432110  0    0000000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      .........+...+|+|++++.++.+. . -.|..+.+-|
T Consensus       198 ~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdg  237 (252)
T PRK07856        198 VAATVPLGRLATPADIAWACLFLASDLASYVSGANLEVHG  237 (252)
T ss_pred             HhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence            000000112467899999999998764 2 3467777765

>PRK07102 short chain dehydrogenase; Provisional

Probab=98.04  E-value=0.00011  Score=58.96  Aligned_cols=127  Identities=15%  Similarity=0.155  Sum_probs=83.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC----CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK----PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~----g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~~   58 (258)
                      +++++.+|++|.+++.++++    ..|.|||+++...                   +.+..++++++    ++.+ ..++
T Consensus        52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~i  130 (243)
T PRK07102         52 AVSTHELDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTI  130 (243)
T ss_pred             eEEEEecCCCChHHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEE
Confidence            57889999999988877765    4699999886421                   22334444444    3456 6788


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+.......    +....|..+|..++.+.+.       .++.++.++||.+.+.+....             ..++
T Consensus       131 v~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-------------~~~~  193 (243)
T PRK07102        131 VGISSVAGDRGR----ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-------------KLPG  193 (243)
T ss_pred             EEEecccccCCC----CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-------------CCCc
Confidence            87 654332221    1234677799987766543       589999999998877542210             0011


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                           ....+.+|+++.+..+++.+
T Consensus       194 -----~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        194 -----PLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             -----cccCCHHHHHHHHHHHHhCC
Confidence                 12567899999999988854

>PRK06114 short chain dehydrogenase; Provisional

Probab=98.03  E-value=8e-05  Score=60.24  Aligned_cols=151  Identities=12%  Similarity=0.067  Sum_probs=89.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v   55 (258)
                      .+..+.+|+.|++++.++++       ..|++||+++...                   +...    +.++.++++.+ .
T Consensus        59 ~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  137 (254)
T PRK06114         59 RAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-G  137 (254)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-C
Confidence            36778999999998887765       3699999998521                   1222    34444555555 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.........  .....|..+|+.++.+.+.       .|+++.+|+||++...+...   +.... ....+.
T Consensus       138 ~~iv~isS~~~~~~~~~--~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~---~~~~~-~~~~~~  211 (254)
T PRK06114        138 GSIVNIASMSGIIVNRG--LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR---PEMVH-QTKLFE  211 (254)
T ss_pred             cEEEEECchhhcCCCCC--CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc---ccchH-HHHHHH
Confidence            67886 55433221111  1134566799988776653       58999999999887654321   11000 000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       -..+.  .-+...+|++..++.++.+..  -.|+.+.+.|
T Consensus       212 -~~~p~--~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dg  249 (254)
T PRK06114        212 -EQTPM--QRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDG  249 (254)
T ss_pred             -hcCCC--CCCcCHHHHHHHHHHHcCccccCcCCceEEECc
Confidence             00001  125678999999999987642  2466777664

>PRK07478 short chain dehydrogenase; Provisional

Probab=98.03  E-value=7.8e-05  Score=60.25  Aligned_cols=151  Identities=15%  Similarity=0.129  Sum_probs=91.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc----c--------------------hhchHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT----E--------------------VEDQFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~----~--------------------~~~~~~li~aa~~~g~   54 (258)
                      .+.++.+|+.|++++.++++       +.|++||+++..    .                    +...+.++..+++.+ 
T Consensus        56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-  134 (254)
T PRK07478         56 EAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-  134 (254)
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            36778999999998887765       679999999742    1                    123344555666666 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+......   +.+....|..+|+..+.+.+.       .++.++.|+||++-..+......   . ..  ..
T Consensus       135 ~~~iv~~sS~~~~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~-~~--~~  205 (254)
T PRK07478        135 GGSLIFTSTFVGHTA---GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD---T-PE--AL  205 (254)
T ss_pred             CceEEEEechHhhcc---CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC---C-HH--HH
Confidence            667887 65432211   112345677799998876653       47999999999886653321110   0 00  00


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...........+...+|+|+.+..++.++.  -.|+.+.+.|
T Consensus       206 ~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg  247 (254)
T PRK07478        206 AFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALLVDG  247 (254)
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCC
Confidence            000000001125689999999999987653  2466777754

>PRK08267 short chain dehydrogenase; Provisional

Probab=98.02  E-value=5.5e-05  Score=61.37  Aligned_cols=135  Identities=19%  Similarity=0.089  Sum_probs=82.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC--------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK--------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|++|.+++.++++        +.|+|||+++...                   +.....+++++    ++.+ 
T Consensus        49 ~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  127 (260)
T PRK08267         49 NAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-  127 (260)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-
Confidence            47889999999988887665        4599999998531                   23333454444    4455 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.......    .....|..+|+.++.+.+.       .++++++|+||++...+.......    ..   .
T Consensus       128 ~~~iv~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~----~~---~  196 (260)
T PRK08267        128 GARVINTSSASAIYGQ----PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNE----VD---A  196 (260)
T ss_pred             CCEEEEeCchhhCcCC----CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccch----hh---h
Confidence            567776 654332221    1234566799988766543       479999999998876543220000    00   0


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ...   ......++.+|+|+++..++..+
T Consensus       197 ~~~---~~~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        197 GST---KRLGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             hhH---hhccCCCCHHHHHHHHHHHHhCC
Confidence            000   00111356799999999998654

>PRK05866 short chain dehydrogenase; Provisional

Probab=98.02  E-value=0.00013  Score=60.39  Aligned_cols=128  Identities=16%  Similarity=0.165  Sum_probs=83.7

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------h----hchHHHHHHHHHhCC
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------V----EDQFKLIAAIKEVGN   54 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~----~~~~~li~aa~~~g~   54 (258)
                      +.++.+|+.|.+++.++++       +.|+|||+++...                     +    ...+.++..+++.+ 
T Consensus        91 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-  169 (293)
T PRK05866         91 AMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-  169 (293)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            6688999999998888876       7899999987421                     1    11234444455666 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.+.....   .+....|..+|+.++.+.+.       .++.+++++||.+-..+....        .  . 
T Consensus       170 ~g~iv~isS~~~~~~~---~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~--------~--~-  235 (293)
T PRK05866        170 DGHIINVATWGVLSEA---SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT--------K--A-  235 (293)
T ss_pred             CcEEEEECChhhcCCC---CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc--------c--c-
Confidence            678887 765543211   11234677799998776543       489999999986655432210        0  0 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                       .  .   ....++.+++|+.+..++...
T Consensus       236 -~--~---~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        236 -Y--D---GLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             -c--c---CCCCCCHHHHHHHHHHHHhcC
Confidence             0  0   123468899999999988754

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.01  E-value=0.0001  Score=59.39  Aligned_cols=149  Identities=15%  Similarity=0.111  Sum_probs=92.8

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--------CcEEEEccCcc---------c----------------hhchHHHHHHHH--
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--------VDVVISAVGRT---------E----------------VEDQFKLIAAIK--   50 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--------~d~Vi~~~~~~---------~----------------~~~~~~li~aa~--   50 (258)
                      .+.++++|+.|++++.++++.        +|++||+++..         .                +....++++++.  
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (253)
T PRK08642         53 RAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPG  132 (253)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence            467889999999988887753        89999998631         0                233455666654  


Q ss_pred             --HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054           51 --EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATA  120 (258)
Q Consensus        51 --~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~  120 (258)
                        +.+ ..++|. |+.....    +..+...|..+|+.++.+++.       .++.++.|+||++-.........     
T Consensus       133 ~~~~~-~g~iv~iss~~~~~----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~-----  202 (253)
T PRK08642        133 MREQG-FGRIINIGTNLFQN----PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP-----  202 (253)
T ss_pred             HHhcC-CeEEEEECCccccC----CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC-----
Confidence              445 567887 5543221    122345778899999988865       47899999999886542211000     


Q ss_pred             CCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          121 PPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       121 ~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       . ..............+.+.+|+|+++..++.++.  ..|..+.+.|
T Consensus       203 -~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdg  248 (253)
T PRK08642        203 -D-EVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDG  248 (253)
T ss_pred             -H-HHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence             0 000000000011237899999999999998642  3466777764

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=97.98  E-value=0.0001  Score=59.24  Aligned_cols=150  Identities=11%  Similarity=0.136  Sum_probs=86.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHH-hCCc--
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKE-VGNI--   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~-~g~v--   55 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                    +.....++.++.. .. .  
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~  131 (248)
T PRK06947         53 RACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLS-TDR  131 (248)
T ss_pred             cEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH-hcC
Confidence            47788999999988876654       5899999997421                    1223344443322 22 2  


Q ss_pred             ----cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           56 ----KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        56 ----k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                          .++|. |+.........   ...+|..+|..++.+.+.       .++.+++++||++...+...-..+.      
T Consensus       132 ~~~~~~ii~~sS~~~~~~~~~---~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~------  202 (248)
T PRK06947        132 GGRGGAIVNVSSIASRLGSPN---EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPG------  202 (248)
T ss_pred             CCCCcEEEEECchhhcCCCCC---CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHH------
Confidence                24776 65433222110   124578899998866543       4799999999998776532100000      


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .....+.....--..+++|+|+.++.++.++.  ..|+.+.+.|
T Consensus       203 -~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~g  246 (248)
T PRK06947        203 -RAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVGG  246 (248)
T ss_pred             -HHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeCC
Confidence             00000100000114578999999999988763  3456666543

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.97  E-value=7.9e-05  Score=60.42  Aligned_cols=151  Identities=13%  Similarity=0.105  Sum_probs=90.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.....++++    .++.+ .
T Consensus        59 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  137 (260)
T PRK07063         59 RVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-R  137 (260)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-C
Confidence            36788999999998888775       6899999997421                   2223334444    34455 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC--CCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP--REN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~--~~~  125 (258)
                      .++|. |+.......    +...+|..+|+.++.+.+.       .|+.+..|+||++-..+...+.... ....  ...
T Consensus       138 g~iv~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~  212 (260)
T PRK07063        138 GSIVNIASTHAFKII----PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQ-PDPAAARAE  212 (260)
T ss_pred             eEEEEECChhhccCC----CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhcc-CChHHHHHH
Confidence            68887 665433221    1234677799999877754       4799999999988655432110000 0000  000


Q ss_pred             -eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 -ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 -~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       ......    .-+...+|+|.++..++.+..  -.|+.+.+-|
T Consensus       213 ~~~~~~~----~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdg  252 (260)
T PRK07063        213 TLALQPM----KRIGRPEEVAMTAVFLASDEAPFINATCITIDG  252 (260)
T ss_pred             HHhcCCC----CCCCCHHHHHHHHHHHcCccccccCCcEEEECC
Confidence             000000    125678999999999988753  2466666654

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.95  E-value=0.00012  Score=59.35  Aligned_cols=155  Identities=13%  Similarity=0.093  Sum_probs=91.7

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk   56 (258)
                      +.++.+|++|++++.++++       ++|+|||+++...                   +....++++++..    .+.-.
T Consensus        58 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g  137 (260)
T PRK06198         58 AVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEG  137 (260)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCC
Confidence            5678999999998887765       5799999997521                   2334455555543    22124


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|..++.+.+.       .++.++.++||++.......... ............
T Consensus       138 ~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~  212 (260)
T PRK06198        138 TIVNIGSMSAHGGQ----PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQR-EFHGAPDDWLEK  212 (260)
T ss_pred             EEEEECCcccccCC----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhh-hccCCChHHHHH
Confidence            6776 665432211    1234677799999887763       46899999999988764321100 000000000000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .........+++.+|+++++..++.++.  ..|+.+.+-|
T Consensus       213 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~  252 (260)
T PRK06198        213 AAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQ  252 (260)
T ss_pred             HhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECC
Confidence            0001111236799999999999987653  3577777754

>TIGR02415 23BDH acetoin reductases

Probab=97.95  E-value=6.4e-05  Score=60.64  Aligned_cols=153  Identities=11%  Similarity=0.113  Sum_probs=88.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchH----HHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQF----KLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~----~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +....    .++.++++.+.-
T Consensus        50 ~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  129 (254)
T TIGR02415        50 KAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG  129 (254)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC
Confidence            36788999999998887764       4699999997521                   11222    333344443312


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+..+.+++.       .++.++.++||.+-......+....   .......
T Consensus       130 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~---~~~~~~~  202 (254)
T TIGR02415       130 GKIINAASIAGHEGN----PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEET---SEIAGKP  202 (254)
T ss_pred             eEEEEecchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhh---hhcccCc
Confidence            57776 664433221    1245677799998877753       4799999999987654432211000   0000000


Q ss_pred             e------ccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEc
Q 025054          128 F------YGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLR  165 (258)
Q Consensus       128 ~------~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~  165 (258)
                      +      +......-.+++.+|+++++..++..+. . .|..+.+-
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d  248 (254)
T TIGR02415       203 IGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVD  248 (254)
T ss_pred             hHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEec
Confidence            0      0000001136788999999999998753 2 35555554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK09242 tropinone reductase; Provisional

Probab=97.94  E-value=0.00026  Score=57.31  Aligned_cols=150  Identities=11%  Similarity=0.045  Sum_probs=91.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+..+.+|+.|.+++.++++       +.|+|||+++...                   +.....+++++    ++.+ .
T Consensus        61 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  139 (257)
T PRK09242         61 EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-S  139 (257)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-C
Confidence            46778999999887766554       5799999997521                   23344555554    4455 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .++...|..+|...+.+++.       .++.++.++||++...+......    . ......
T Consensus       140 ~~ii~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~----~-~~~~~~  210 (257)
T PRK09242        140 SAIVNIGSVSGLTH----VRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS----D-PDYYEQ  210 (257)
T ss_pred             ceEEEECccccCCC----CCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC----C-hHHHHH
Confidence            78887 66543221    12345677799998887763       47999999999887765332110    0 000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      +... ....-+...+|++.++..++... . -.|+.+.+.|
T Consensus       211 ~~~~-~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g  250 (257)
T PRK09242        211 VIER-TPMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDG  250 (257)
T ss_pred             HHhc-CCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence            0000 00012457899999999988754 2 2467777764

>PRK07985 oxidoreductase; Provisional

Probab=97.92  E-value=0.00022  Score=59.10  Aligned_cols=150  Identities=14%  Similarity=0.113  Sum_probs=90.5

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHh-CCccEE
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEV-GNIKRF   58 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~-g~vk~~   58 (258)
                      +.++.+|++|.+++.++++       ++|++||+++...                    +.+...+++++... ..-.++
T Consensus       102 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~i  181 (294)
T PRK07985        102 AVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASI  181 (294)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEE
Confidence            6678999999988776654       5799999987420                    33445666666532 101467


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+.......    +....|..+|+.++.+.+.       .|+++.+|+||++.+.+.......      ........
T Consensus       182 v~iSS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~------~~~~~~~~  251 (294)
T PRK07985        182 ITTSSIQAYQPS----PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT------QDKIPQFG  251 (294)
T ss_pred             EEECCchhccCC----CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCC------HHHHHHHh
Confidence            77 665443221    1234677799998876643       589999999999987653211000      00000011


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .......+...+|+|+++..++.+..  -.|..+.+.|
T Consensus       252 ~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i~vdg  289 (294)
T PRK07985        252 QQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCG  289 (294)
T ss_pred             ccCCCCCCCCHHHHHHHHHhhhChhcCCccccEEeeCC
Confidence            10000125678999999999987653  2366777764

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.91  E-value=0.00019  Score=57.67  Aligned_cols=152  Identities=16%  Similarity=0.041  Sum_probs=90.4

Q ss_pred             eEEeccCCCHHHHHHhhC----CCcEEEEccCccc-----------hhchHHHHHHHHHh--CCccEEEc-CCCCCCCCC
Q 025054            8 LIAQGDLHDHESLVKAIK----PVDVVISAVGRTE-----------VEDQFKLIAAIKEV--GNIKRFFP-TEYGSNVDA   69 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~----g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~--g~vk~~v~-S~~~~~~~~   69 (258)
                      +++.+|++|.+++.++++    +.|+|||+++...           +.+...+++++...  . -.++|. |+.......
T Consensus        26 ~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~g~Iv~isS~~~~~~~  104 (241)
T PRK12428         26 GFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGLRHLTEALLPRMAP-GGAIVNVASLAGAEWP  104 (241)
T ss_pred             HhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHHHHHHHHHHHhccC-CcEEEEeCcHHhhccc
Confidence            456889999999888876    5899999998532           44556677776543  2 247887 554322100


Q ss_pred             C-----------------------CCCCCCccchhhHHHHHHHHH--------hCCCCeEEEecCcccccCcCCCCCCCC
Q 025054           70 G-----------------------HPIEPAKSGYARKAKIRRAIE--------AEGIPHTYVSCNCSFGFFLPTMAQPGA  118 (258)
Q Consensus        70 ~-----------------------~~~~~~~~~~~~k~~~e~~l~--------~~~~~~t~lr~~~~~~~~~~~~~~~~~  118 (258)
                      .                       .+.+...+|..+|..++.+.+        ..|+.++.|+||.+...+........ 
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~-  183 (241)
T PRK12428        105 QRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSML-  183 (241)
T ss_pred             cchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhh-
Confidence            0                       112234567779999875542        25799999999998876543211000 


Q ss_pred             CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      ..........+     ...+...+|+|++++.++.++ . -.|+.+.+.|
T Consensus       184 ~~~~~~~~~~~-----~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdg  228 (241)
T PRK12428        184 GQERVDSDAKR-----MGRPATADEQAAVLVFLCSDAARWINGVNLPVDG  228 (241)
T ss_pred             hhHhhhhcccc-----cCCCCCHHHHHHHHHHHcChhhcCccCcEEEecC
Confidence            00000000001     012467899999999988654 2 2355566653

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.91  E-value=0.00014  Score=58.72  Aligned_cols=151  Identities=15%  Similarity=0.094  Sum_probs=90.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhch----HHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQ----FKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~----~~li~aa~~~g~   54 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                    +...    +.++...++.+ 
T Consensus        57 ~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-  135 (253)
T PRK06172         57 EALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-  135 (253)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            47788999999998887765       4599999987421                    1112    23334444555 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.......    +....|..+|+.++.+.+.       .++.+..+.||.+-..+...... .   ......
T Consensus       136 ~~~ii~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~-~---~~~~~~  207 (253)
T PRK06172        136 GGAIVNTASVAGLGAA----PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE-A---DPRKAE  207 (253)
T ss_pred             CcEEEEECchhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc-c---ChHHHH
Confidence            567787 654432221    1234566799998877654       47999999999887655432110 0   000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      .+... .....+.+.+|+++.+..++.+. . ..|+.+.+.|
T Consensus       208 ~~~~~-~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        208 FAAAM-HPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDG  248 (253)
T ss_pred             HHhcc-CCCCCccCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            00000 00112568999999999998865 2 3567777765

>PRK05717 oxidoreductase; Validated

Probab=97.90  E-value=0.0002  Score=57.86  Aligned_cols=149  Identities=9%  Similarity=0.019  Sum_probs=90.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHH---hCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKE---VGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~---~g~   54 (258)
                      .+.++.+|+.|.+++.++++       .+|+|||+++...                     +....++++++..   .. 
T Consensus        57 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-  135 (255)
T PRK05717         57 NAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-  135 (255)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-
Confidence            46788999999988766543       4799999997421                     3455677777753   22 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      ..++|. |+.......    +....|..+|+.++.+.+.      .++.++.|+||++.+.......... . .......
T Consensus       136 ~g~ii~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~-~-~~~~~~~  209 (255)
T PRK05717        136 NGAIVNLASTRARQSE----PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEP-L-SEADHAQ  209 (255)
T ss_pred             CcEEEEEcchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchH-H-HHHHhhc
Confidence            246666 655433221    1234677799999877764      3588999999998876422110000 0 0000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+.     ..+.+.+|+|.++..++++..  ..|+.+.+.|
T Consensus       210 ~~~-----~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g  245 (255)
T PRK05717        210 HPA-----GRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDG  245 (255)
T ss_pred             CCC-----CCCcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence            010     125688999999998887542  2466666654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.90  E-value=0.00019  Score=57.25  Aligned_cols=144  Identities=18%  Similarity=0.115  Sum_probs=85.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------hhchHHHHHHHHHh--CCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------VEDQFKLIAAIKEV--GNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------~~~~~~li~aa~~~--g~vk~~v   59 (258)
                      ++.++.+|++|++++.++++       ++|.++++++...                 +.....+++++...  . -.++|
T Consensus        54 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv  132 (238)
T PRK05786         54 NIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-GSSIV  132 (238)
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-CCEEE
Confidence            47889999999998877654       4699999887421                 11222233333221  1 13566


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD  131 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  131 (258)
                      . |+.+.....   .++...|..+|...+.+++.       .+++++++|||++++.+.+..   .   ..  ..  .. 
T Consensus       133 ~~ss~~~~~~~---~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~---~---~~--~~--~~-  198 (238)
T PRK05786        133 LVSSMSGIYKA---SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER---N---WK--KL--RK-  198 (238)
T ss_pred             EEecchhcccC---CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh---h---hh--hh--cc-
Confidence            5 654332111   12334577799888755432       589999999999998653210   0   00  00  00 


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                        ....+++.+|+++++..++.++.  ..|..+.+.|
T Consensus       199 --~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~  233 (238)
T PRK05786        199 --LGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDG  233 (238)
T ss_pred             --ccCCCCCHHHHHHHHHHHhcccccCccCCEEEECC
Confidence              01135788999999999997653  3466666653

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.90  E-value=0.00014  Score=59.05  Aligned_cols=157  Identities=13%  Similarity=0.144  Sum_probs=89.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      .+.++.+|+.|.+++.++++       +.|+|||+++...                   +.....+++++.    +.+ .
T Consensus        55 ~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  133 (263)
T PRK08226         55 RCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-D  133 (263)
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-C
Confidence            36688999999998887765       5799999998521                   233344555543    344 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......   .+....|..+|+..+.+.+.       .++.++.|+||.+...+...+............+.
T Consensus       134 ~~iv~isS~~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  210 (263)
T PRK08226        134 GRIVMMSSVTGDMVA---DPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLT  210 (263)
T ss_pred             cEEEEECcHHhcccC---CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHH
Confidence            67886 554332111   11234566799988877653       47999999999888765432110000000000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      ....+.....+.+.+|+|+++..++... . -.|+.+.+-|
T Consensus       211 ~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dg  251 (263)
T PRK08226        211 EMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDG  251 (263)
T ss_pred             HHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECC
Confidence            0000000112568999999998887653 2 2355666654

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.90  E-value=0.00023  Score=57.37  Aligned_cols=150  Identities=11%  Similarity=0.048  Sum_probs=87.3

Q ss_pred             eeEEeccCCCHHHHHHhhC-------------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-
Q 025054            7 CLIAQGDLHDHESLVKAIK-------------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-   53 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-   53 (258)
                      +..+..|+.|.+++..+++             +.|++||+++...                   +.+...+++++...- 
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~  135 (252)
T PRK12747         56 AFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR  135 (252)
T ss_pred             eEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence            4567789988776554331             5899999998421                   233344555554321 


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      .-.++|. |+......    .+....|..+|+.++.+.+.       .++.+..|.||++...+...... .   .....
T Consensus       136 ~~g~iv~isS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~---~~~~~  207 (252)
T PRK12747        136 DNSRIINISSAATRIS----LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-D---PMMKQ  207 (252)
T ss_pred             cCCeEEEECCcccccC----CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-C---HHHHH
Confidence            0247887 66543321    12245677799999877653       58999999999887765322110 0   00000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .  .........+.+++|+|.++..++....  -.|+.+.+.|
T Consensus       208 ~--~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdg  248 (252)
T PRK12747        208 Y--ATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG  248 (252)
T ss_pred             H--HHhcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecC
Confidence            0  0000001236789999999999887542  2466677664

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.90  E-value=0.00024  Score=57.28  Aligned_cols=149  Identities=11%  Similarity=0.024  Sum_probs=89.5

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchH----HHHHHHHHhCCc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQF----KLIAAIKEVGNI   55 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~----~li~aa~~~g~v   55 (258)
                      +..+.+|+.|.+++.++++       ..|+|||+++...                    +....    .++..+++.+ .
T Consensus        59 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  137 (252)
T PRK07035         59 AEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-G  137 (252)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-C
Confidence            5678999999988776655       4799999997310                    12333    3334445555 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .+++. |+......    .++...|..+|+.++.+++.       .|++++.|.||.+...+.......      .....
T Consensus       138 ~~iv~~sS~~~~~~----~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~------~~~~~  207 (252)
T PRK07035        138 GSIVNVASVNGVSP----GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN------DAILK  207 (252)
T ss_pred             cEEEEECchhhcCC----CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC------HHHHH
Confidence            78887 65433221    12345677799999877764       489999999998876543321100      00000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      ..........+...+|+|+.+..++.+.. . .|+.+.+-|
T Consensus       208 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dg  248 (252)
T PRK07035        208 QALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDG  248 (252)
T ss_pred             HHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence            00000001125678999999999988753 2 466666654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.89  E-value=0.00015  Score=58.68  Aligned_cols=149  Identities=14%  Similarity=0.159  Sum_probs=92.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhchHHHHHHHH----HhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VEDQFKLIAAIK----EVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~~~~li~aa~----~~g~vk   56 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                  +....++++++.    +.+ ..
T Consensus        61 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~  139 (255)
T PRK06113         61 QAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GG  139 (255)
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-Cc
Confidence            36678999999998877654       5799999987421                  234455666654    334 45


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    ++...|..+|+.++.+++.       .++.++++.||.+..........+..   .. .  .
T Consensus       140 ~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~---~~-~--~  209 (255)
T PRK06113        140 VILTITSMAAENKN----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI---EQ-K--M  209 (255)
T ss_pred             EEEEEecccccCCC----CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHH---HH-H--H
Confidence            7887 665433211    2344677799999887754       47899999999887654322110000   00 0  0


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ... .....+...+|+++++..++....  -.|+.+++.|
T Consensus       210 ~~~-~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~g  248 (255)
T PRK06113        210 LQH-TPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSG  248 (255)
T ss_pred             Hhc-CCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence            000 001125688999999999987642  2467788875

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.89  E-value=0.00033  Score=59.06  Aligned_cols=134  Identities=19%  Similarity=0.142  Sum_probs=82.2

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHH----HHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFK----LIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~----li~aa~~~g~vk   56 (258)
                      +.++.+|++|.+++.++++       ++|++||+++...                   +.+..+    ++...++.+ -.
T Consensus        58 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g  136 (330)
T PRK06139         58 VLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HG  136 (330)
T ss_pred             EEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CC
Confidence            5678899999998888763       6899999997421                   112223    333344555 45


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      ++|. |+.+.....    +....|..+|+.++.+.+.        .++.++.+.||.+..++.......     ....  
T Consensus       137 ~iV~isS~~~~~~~----p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-----~~~~--  205 (330)
T PRK06139        137 IFINMISLGGFAAQ----PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-----TGRR--  205 (330)
T ss_pred             EEEEEcChhhcCCC----CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-----cccc--
Confidence            7776 554332211    1234677799976654432        379999999998877654221100     0000  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                          .....++.+.+|+|++++.++..++
T Consensus       206 ----~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        206 ----LTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             ----ccCCCCCCCHHHHHHHHHHHHhCCC
Confidence                0112246789999999999998763

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.89  E-value=0.00026  Score=57.97  Aligned_cols=155  Identities=15%  Similarity=0.113  Sum_probs=91.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------------------------hh
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------------------------VE   40 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------------------------~~   40 (258)
                      .+..+.+|+.|.+++.++++       ++|++||+++...                                      ..
T Consensus        60 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  139 (278)
T PRK08277         60 EALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLL  139 (278)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHH
Confidence            36778999999988877654       6899999987310                                      11


Q ss_pred             chHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCC
Q 025054           41 DQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPT  112 (258)
Q Consensus        41 ~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~  112 (258)
                      ..+.++..+++.+ ..++|. |+......    .++...|..+|+.++.+.+.       .++.+..|+||++.......
T Consensus       140 ~~~~~~~~~~~~~-~g~ii~isS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~  214 (278)
T PRK08277        140 PTQVFAKDMVGRK-GGNIINISSMNAFTP----LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRA  214 (278)
T ss_pred             HHHHHHHHHHhcC-CcEEEEEccchhcCC----CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhh
Confidence            1234455555555 567887 66543321    12234577799999877754       47999999999998764322


Q ss_pred             CCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcC-CC--CCCceEEEcC
Q 025054          113 MAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDD-PR--TLNKTLYLRP  166 (258)
Q Consensus       113 ~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~-~~--~~~~~~~l~g  166 (258)
                      +............-.+.. .....-+...+|+|+++..++.+ ..  -.|..+.+.|
T Consensus       215 ~~~~~~~~~~~~~~~~~~-~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdg  270 (278)
T PRK08277        215 LLFNEDGSLTERANKILA-HTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDG  270 (278)
T ss_pred             hhccccccchhHHHHHhc-cCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECC
Confidence            110000000000000000 00111256889999999998887 42  2466777764

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.88  E-value=0.00017  Score=58.92  Aligned_cols=142  Identities=15%  Similarity=0.096  Sum_probs=81.5

Q ss_pred             eEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccE
Q 025054            8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKR   57 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~   57 (258)
                      .++.+|+.|++++.++++       ++|+|||+++...                   +.+..++++++    ++.+...+
T Consensus        53 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~  132 (272)
T PRK07832         53 EHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGH  132 (272)
T ss_pred             eEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcE
Confidence            457899999888776554       5799999997421                   23334455554    23321357


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +|. |+.......    +....|..+|..++.+.+       ..++++++++||.+.+++.......+............
T Consensus       133 ii~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  208 (272)
T PRK07832        133 LVNVSSAAGLVAL----PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV  208 (272)
T ss_pred             EEEEccccccCCC----CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH
Confidence            887 665432211    123456678987765553       25899999999999876543321100000000000000


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      .  ......++.+|+|++++.++..+
T Consensus       209 ~--~~~~~~~~~~~vA~~~~~~~~~~  232 (272)
T PRK07832        209 D--RFRGHAVTPEKAAEKILAGVEKN  232 (272)
T ss_pred             H--hcccCCCCHHHHHHHHHHHHhcC
Confidence            0  11123579999999999998643

>PRK08589 short chain dehydrogenase; Validated

Probab=97.88  E-value=0.00026  Score=57.95  Aligned_cols=154  Identities=12%  Similarity=0.113  Sum_probs=89.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~   54 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                        +...+.++...++.+ 
T Consensus        55 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-  133 (272)
T PRK08589         55 KAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-  133 (272)
T ss_pred             eEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            37789999999988877665       4799999997421                        111233444444444 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                       .++|. |+.......    +....|..+|+.++.+.+.       .|+.++.|.||.+...+........ .......+
T Consensus       134 -g~iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~  207 (272)
T PRK08589        134 -GSIINTSSFSGQAAD----LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTS-EDEAGKTF  207 (272)
T ss_pred             -CEEEEeCchhhcCCC----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccc-hhhHHHHH
Confidence             47776 665432211    1234677799999877754       4799999999988765432211000 00000000


Q ss_pred             E-eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 L-FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~-~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      . ..........+.+.+|+|+++..++.++.  -.|+.+.+.|
T Consensus       208 ~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdg  250 (272)
T PRK08589        208 RENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDG  250 (272)
T ss_pred             hhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECC
Confidence            0 00000000125688999999999987642  2466677764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.88  E-value=0.00027  Score=65.27  Aligned_cols=157  Identities=15%  Similarity=0.085  Sum_probs=91.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|.+++.++++       ++|+|||+++...                   +.+    .+.++..+++.+.-
T Consensus       466 ~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~  545 (676)
T TIGR02632       466 RAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLG  545 (676)
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            35678999999999888776       6899999998531                   111    22333444444412


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc-cCc--CCCCCCCC--CCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG-FFL--PTMAQPGA--TAPP  122 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~-~~~--~~~~~~~~--~~~~  122 (258)
                      .++|+ |+.+.....    +....|..+|+..+.+++.       .++.+..|+||.+.. ...  ..+.....  ....
T Consensus       546 g~IV~iSS~~a~~~~----~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~  621 (676)
T TIGR02632       546 GNIVFIASKNAVYAG----KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIP  621 (676)
T ss_pred             CEEEEEeChhhcCCC----CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCC
Confidence            46777 664432221    1245677799999887764       479999999998863 211  11000000  0000


Q ss_pred             CCc-eEeccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcC
Q 025054          123 REN-ILFYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRP  166 (258)
Q Consensus       123 ~~~-~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g  166 (258)
                      ... ...+...+....+++.+|+|+++..++.+.  ...|..+++.|
T Consensus       622 ~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       622 ADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             hHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            000 001111122233688999999999988754  23477888865

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.87  E-value=0.0002  Score=57.95  Aligned_cols=151  Identities=13%  Similarity=0.128  Sum_probs=86.7

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hh----chHHHHHHHHHhCC
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VE----DQFKLIAAIKEVGN   54 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~----~~~~li~aa~~~g~   54 (258)
                      ..++.+|++|.+++.++++       +.|+|||+++...                     +.    ..+.++...++.+ 
T Consensus        53 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-  131 (255)
T PRK06057         53 GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-  131 (255)
T ss_pred             CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-
Confidence            4678899999998888776       4699999987421                     11    1233444444555 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+........   .+...|..+|+..+.+.+.       .++.+++|+||++.+.+........ .....+.+
T Consensus       132 ~g~iv~~sS~~~~~g~~---~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~  207 (255)
T PRK06057        132 KGSIINTASFVAVMGSA---TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD-PERAARRL  207 (255)
T ss_pred             CcEEEEEcchhhccCCC---CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC-HHHHHHHH
Confidence            556776 5543222111   1234577789876655442       5899999999999876543211000 00000001


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .....+    .+.+++|+++++..++.+..  ..+..+.+.|
T Consensus       208 ~~~~~~----~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~  245 (255)
T PRK06057        208 VHVPMG----RFAEPEEIAAAVAFLASDDASFITASTFLVDG  245 (255)
T ss_pred             hcCCCC----CCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            011111    36789999999988887642  2355565543

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.87  E-value=0.00053  Score=56.08  Aligned_cols=102  Identities=18%  Similarity=0.088  Sum_probs=66.1

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH---hCCc
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE---VGNI   55 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~---~g~v   55 (258)
                      .+++++.+|+.|.+++.++++       ++|+|||+++...                   +.+..++++++..   .+ .
T Consensus        44 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~  122 (274)
T PRK05693         44 AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-R  122 (274)
T ss_pred             CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C
Confidence            467788999999988877653       6799999998421                   1233344444422   23 3


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLP  111 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~  111 (258)
                      .++|. |+.......    +...+|..+|..++.+.+.       .|+.+++++||.+...+..
T Consensus       123 g~iv~isS~~~~~~~----~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  182 (274)
T PRK05693        123 GLVVNIGSVSGVLVT----PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFAS  182 (274)
T ss_pred             CEEEEECCccccCCC----CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccc
Confidence            56776 554332211    1245677799988776532       5899999999999776543

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.00023  Score=57.87  Aligned_cols=152  Identities=14%  Similarity=0.110  Sum_probs=88.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhchHHHHHHHHH---hCCccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VEDQFKLIAAIKE---VGNIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~~~~li~aa~~---~g~vk~   57 (258)
                      .+.++.+|++|.+++.++++       ..|++||+++...                  +.....+++++..   .+ -.+
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~  131 (261)
T PRK08265         53 RARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARG-GGA  131 (261)
T ss_pred             eeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC-CcE
Confidence            47788999999998887765       5699999987421                  1222333333322   23 356


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +|. |+.......    +....|..+|+.++.+.+.       .++.++.|+||++...+...... ... .....+...
T Consensus       132 ii~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~-~~~-~~~~~~~~~  205 (261)
T PRK08265        132 IVNFTSISAKFAQ----TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSG-GDR-AKADRVAAP  205 (261)
T ss_pred             EEEECchhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcc-cch-hHHHHhhcc
Confidence            776 654432221    1234577799998877754       47999999999887655332110 000 000000000


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..+..  .+...+|+|+++..+++++.  ..|+.+.+.|
T Consensus       206 ~~p~~--r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdg  242 (261)
T PRK08265        206 FHLLG--RVGDPEEVAQVVAFLCSDAASFVTGADYAVDG  242 (261)
T ss_pred             cCCCC--CccCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence            00111  24578999999999997652  2466677754

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.84  E-value=0.00035  Score=55.65  Aligned_cols=150  Identities=17%  Similarity=0.144  Sum_probs=88.4

Q ss_pred             ceeEEeccCCCH-HHHHHhhCCCcEEEEccCcc----c----------------hhchHHHHHHHH----HhCCccEEEc
Q 025054            6 NCLIAQGDLHDH-ESLVKAIKPVDVVISAVGRT----E----------------VEDQFKLIAAIK----EVGNIKRFFP   60 (258)
Q Consensus         6 gv~~~~~D~~d~-~~l~~al~g~d~Vi~~~~~~----~----------------~~~~~~li~aa~----~~g~vk~~v~   60 (258)
                      ++.++.+|+.|+ +.+.+.+.++|+|||+++..    .                +....++++++.    +.+ -.++|+
T Consensus        46 ~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~  124 (235)
T PRK06550         46 NFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIIN  124 (235)
T ss_pred             cEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence            467888999887 55556666899999999731    0                223344555543    344 457887


Q ss_pred             -CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054           61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG  132 (258)
Q Consensus        61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  132 (258)
                       |+.......    +....|..+|+.++.+.+.       .+++++.++||++...+........  ... ..+  . ..
T Consensus       125 ~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~-~~~--~-~~  194 (235)
T PRK06550        125 MCSIASFVAG----GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPG--GLA-DWV--A-RE  194 (235)
T ss_pred             EcChhhccCC----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCch--HHH-HHH--h-cc
Confidence             654332211    1234677799988776643       5899999999988765432100000  000 000  0 00


Q ss_pred             CceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          133 QPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       133 ~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .....+...+|+|.++..++.++.  ..+..+.+.|
T Consensus       195 ~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~g  230 (235)
T PRK06550        195 TPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDG  230 (235)
T ss_pred             CCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECC
Confidence            111236788999999999987642  2456666654

>PRK12742 oxidoreductase; Provisional

Probab=97.84  E-value=0.00037  Score=55.54  Aligned_cols=148  Identities=11%  Similarity=0.097  Sum_probs=87.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHHHHHHh-CCccEEEc-C
Q 025054            6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV-GNIKRFFP-T   61 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~-g~vk~~v~-S   61 (258)
                      +++++.+|++|.+++.++++   +.|++||+++...                   +.....++.++... ....++|. |
T Consensus        52 ~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  131 (237)
T PRK12742         52 GATAVQTDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIG  131 (237)
T ss_pred             CCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence            56788899999888877765   4799999987531                   12223333333322 11357776 6


Q ss_pred             CCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCc
Q 025054           62 EYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQP  134 (258)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  134 (258)
                      +......   +.++...|..+|+.++.+++.       .++.++.|+||.+...+.+... .    ..........    
T Consensus       132 S~~~~~~---~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~-~----~~~~~~~~~~----  199 (237)
T PRK12742        132 SVNGDRM---PVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG-P----MKDMMHSFMA----  199 (237)
T ss_pred             ccccccC---CCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc-H----HHHHHHhcCC----
Confidence            5443211   112345677899999977753       5799999999988765432110 0    0000000000    


Q ss_pred             eeeeeccchHHHHHHHHhcCCC-C-CCceEEEc
Q 025054          135 KAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLR  165 (258)
Q Consensus       135 ~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~  165 (258)
                      ...+.+.+|+++++..++++.. . .|..+.+-
T Consensus       200 ~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~d  232 (237)
T PRK12742        200 IKRHGRPEEVAGMVAWLAGPEASFVTGAMHTID  232 (237)
T ss_pred             CCCCCCHHHHHHHHHHHcCcccCcccCCEEEeC
Confidence            0125688999999999887652 2 35555554

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.83  E-value=0.00037  Score=56.25  Aligned_cols=150  Identities=11%  Similarity=0.082  Sum_probs=89.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      .+..+.+|++|++++.++++       ++|++||+++...                   +.....+++++.    +.++-
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  138 (253)
T PRK05867         59 KVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQG  138 (253)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCC
Confidence            46778999999998887764       6899999987521                   233344444443    33211


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.........  .....|..+|+.++.+.+.       .|+.+..|+||.+-..+.......     . ... 
T Consensus       139 g~iv~~sS~~~~~~~~~--~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~-----~-~~~-  209 (253)
T PRK05867        139 GVIINTASMSGHIINVP--QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY-----Q-PLW-  209 (253)
T ss_pred             cEEEEECcHHhcCCCCC--CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH-----H-HHH-
Confidence            35666 55432211100  0124577799999877764       489999999999876543221100     0 000 


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ....+.  -.+...+|+|+++..++.+..  -.|+.+.+-|
T Consensus       210 ~~~~~~--~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg  248 (253)
T PRK05867        210 EPKIPL--GRLGRPEELAGLYLYLASEASSYMTGSDIVIDG  248 (253)
T ss_pred             HhcCCC--CCCcCHHHHHHHHHHHcCcccCCcCCCeEEECC
Confidence            000000  125689999999999987642  2466777764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.82  E-value=0.00053  Score=55.48  Aligned_cols=145  Identities=14%  Similarity=0.029  Sum_probs=88.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +.....+++++..    .+ -
T Consensus        68 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  146 (256)
T PRK12748         68 RCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-G  146 (256)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-C
Confidence            37889999999988777664       4799999987421                   2334555655543    23 4


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .+....|..+|+.++.+++.       .++.++.++||.+...+....  ..    ..-...
T Consensus       147 ~~iv~~ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~--~~----~~~~~~  216 (256)
T PRK12748        147 GRIINLTSGQSLGP----MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE--LK----HHLVPK  216 (256)
T ss_pred             eEEEEECCccccCC----CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh--HH----Hhhhcc
Confidence            57887 65433211    12244677799999987654       479999999998766543210  00    000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+.     ..+...+|+|+.+..++....  ..++.+++.|
T Consensus       217 ~~~-----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        217 FPQ-----GRVGEPVDAARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             CCC-----CCCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence            111     124467999999988887642  2366777753

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.80  E-value=0.00033  Score=56.35  Aligned_cols=148  Identities=13%  Similarity=0.079  Sum_probs=86.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------------------------hhch----HHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------------------------VEDQ----FKLI   46 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------------------------~~~~----~~li   46 (258)
                      .+.++.+|+.|.+++.++++       +.|+|||+++...                            +...    +.++
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  134 (253)
T PRK08217         55 EVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAA  134 (253)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            35678999999888766554       4699999987311                            1111    2223


Q ss_pred             HHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC
Q 025054           47 AAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA  118 (258)
Q Consensus        47 ~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~  118 (258)
                      ....+...-.+++. |+.+.. .    .++...|..+|+.++.+++.       .++..+.++||.+.+.+..... +. 
T Consensus       135 ~~l~~~~~~~~iv~~ss~~~~-~----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~-~~-  207 (253)
T PRK08217        135 AKMIESGSKGVIINISSIARA-G----NMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK-PE-  207 (253)
T ss_pred             HHHHhcCCCeEEEEEcccccc-C----CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-HH-
Confidence            33333321235666 554322 1    12345677799988876543       5799999999998765432210 00 


Q ss_pred             CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                            .............+.+.+|+++++..++......|+.+++.|
T Consensus       208 ------~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~g  249 (253)
T PRK08217        208 ------ALERLEKMIPVGRLGEPEEIAHTVRFIIENDYVTGRVLEIDG  249 (253)
T ss_pred             ------HHHHHHhcCCcCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCC
Confidence                  000000111112356889999999999876434677888875

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.79  E-value=0.00061  Score=55.01  Aligned_cols=149  Identities=15%  Similarity=0.086  Sum_probs=88.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.....+.+    ..++.+.-
T Consensus        56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~  135 (251)
T PRK12481         56 KFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNG  135 (251)
T ss_pred             eEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCC
Confidence            36788999999998888775       5799999987421                   222233333    33333312


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-  126 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||.+...+...+....   .....+ 
T Consensus       136 g~ii~isS~~~~~~~----~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~---~~~~~~~  208 (251)
T PRK12481        136 GKIINIASMLSFQGG----IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADT---ARNEAIL  208 (251)
T ss_pred             CEEEEeCChhhcCCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccCh---HHHHHHH
Confidence            46776 554332211    1234577799999877653       5899999999988765432211000   000000 


Q ss_pred             -EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .++   .  ..+...+|+|.++..++.+..  -.|+.+.+.|
T Consensus       209 ~~~p---~--~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdg  246 (251)
T PRK12481        209 ERIP---A--SRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDG  246 (251)
T ss_pred             hcCC---C--CCCcCHHHHHHHHHHHhCccccCcCCceEEECC
Confidence             011   1  125789999999999997642  3466666654

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.00058  Score=55.20  Aligned_cols=149  Identities=11%  Similarity=0.058  Sum_probs=87.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCC-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGN-   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~-   54 (258)
                      ++.++.+|+++.+++.++++       ++|++||+++...                   +.....+++++.    +... 
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  138 (258)
T PRK06949         59 AAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKG  138 (258)
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCc
Confidence            47889999999998888776       5899999998421                   223334444432    2220 


Q ss_pred             ------ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054           55 ------IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATA  120 (258)
Q Consensus        55 ------vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~  120 (258)
                            ..++|. |+......    .+...+|..+|+..+.+.+.       .++++++|+||++.+.+.....  .   
T Consensus       139 ~~~~~~~g~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~--~---  209 (258)
T PRK06949        139 AGNTKPGGRIINIASVAGLRV----LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW--E---  209 (258)
T ss_pred             CCCCCCCeEEEEECcccccCC----CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc--C---
Confidence                  146776 55433211    12345677799988776653       4799999999999876532210  0   


Q ss_pred             CCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEc
Q 025054          121 PPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLR  165 (258)
Q Consensus       121 ~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~  165 (258)
                       ......+...-. ...+...+|+++++..++.+.. . .|..+.+-
T Consensus       210 -~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~d  254 (258)
T PRK06949        210 -TEQGQKLVSMLP-RKRVGKPEDLDGLLLLLAADESQFINGAIISAD  254 (258)
T ss_pred             -hHHHHHHHhcCC-CCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeC
Confidence             000000010000 1135568999999999988642 2 35555554

>PRK05855 short chain dehydrogenase; Validated

Probab=97.77  E-value=0.00029  Score=63.85  Aligned_cols=101  Identities=13%  Similarity=0.039  Sum_probs=66.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      ++.++.+|++|++++.++++       ++|++||+++...                   +.+..+++++    .++.+.-
T Consensus       365 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~  444 (582)
T PRK05855        365 VAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTG  444 (582)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            46888999999998887775       4799999997531                   2223344443    3344311


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL  110 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~  110 (258)
                      .++|. |+..+....    +....|..+|+.++.+.+.       .|+.++.|+||.+-..+.
T Consensus       445 g~iv~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  503 (582)
T PRK05855        445 GHIVNVASAAAYAPS----RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIV  503 (582)
T ss_pred             cEEEEECChhhccCC----CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccch
Confidence            47777 665433211    2345677899988766542       589999999998866543

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00031  Score=56.38  Aligned_cols=153  Identities=17%  Similarity=0.144  Sum_probs=87.6

Q ss_pred             eeEEeccCCCHHHHHHhh-------CCCcEEEEccCccc-------------------hhchHHHHHHHHH--hCCccEE
Q 025054            7 CLIAQGDLHDHESLVKAI-------KPVDVVISAVGRTE-------------------VEDQFKLIAAIKE--VGNIKRF   58 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~--~g~vk~~   58 (258)
                      +.++.+|+.|.+++...+       .++|+|||+++...                   +....++++++..  .. ..++
T Consensus        54 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~  132 (249)
T PRK06500         54 ALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-PASI  132 (249)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEE
Confidence            567889999887765543       36899999997421                   3445677777764  12 2344


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+.......    +...+|..+|+..+.+++.       .++++++++||.+.+.+.......... .....-.+..
T Consensus       133 i~~~S~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~-~~~~~~~~~~  207 (249)
T PRK06500        133 VLNGSINAHIGM----PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEAT-LDAVAAQIQA  207 (249)
T ss_pred             EEEechHhccCC----CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccc-hHHHHHHHHh
Confidence            44 543332211    2345677799999887743       489999999999887653221000000 0000000000


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .....-+.+.+|+|+++..++.++.  ..|..+.+.|
T Consensus       208 -~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g  244 (249)
T PRK06500        208 -LVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDG  244 (249)
T ss_pred             -cCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence             0000114588999999999887642  2355555553

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.76  E-value=0.0003  Score=57.11  Aligned_cols=150  Identities=16%  Similarity=0.077  Sum_probs=88.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc---------c--------------------hhchHHHHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT---------E--------------------VEDQFKLIAAI   49 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~---------~--------------------~~~~~~li~aa   49 (258)
                      .+.++.+|++|++++.++++       ++|++||+++..         .                    +...+.++...
T Consensus        60 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  139 (260)
T PRK08416         60 KAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRM  139 (260)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhh
Confidence            36788999999988877665       479999998521         0                    11123344444


Q ss_pred             HHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCC
Q 025054           50 KEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAP  121 (258)
Q Consensus        50 ~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~  121 (258)
                      ++.+ -.++|. |+.+....    .+....|..+|+.++.+.+.       .|+.+..|.||.+-..+...+...     
T Consensus       140 ~~~~-~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~-----  209 (260)
T PRK08416        140 EKVG-GGSIISLSSTGNLVY----IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY-----  209 (260)
T ss_pred             hccC-CEEEEEEeccccccC----CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-----
Confidence            4445 467887 66543221    11234677799999877754       489999999998765542211100     


Q ss_pred             CCCceEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          122 PRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       122 ~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      ....-.+... .....+.+.+|+|.+++.++.++ . -.|+.+.+.|
T Consensus       210 ~~~~~~~~~~-~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdg  255 (260)
T PRK08416        210 EEVKAKTEEL-SPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDG  255 (260)
T ss_pred             HHHHHHHHhc-CCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcC
Confidence            0000000000 00012568999999999998764 2 2466666654

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00068  Score=55.04  Aligned_cols=150  Identities=12%  Similarity=0.055  Sum_probs=87.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +.....+++++    +..+.-
T Consensus        70 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  149 (262)
T PRK07831         70 RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHG  149 (262)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            47788999999988877664       5799999998421                   22223333333    332212


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .++.+..|+||.+...+.......       ....
T Consensus       150 g~iv~~ss~~~~~~~----~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~-------~~~~  218 (262)
T PRK07831        150 GVIVNNASVLGWRAQ----HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSA-------ELLD  218 (262)
T ss_pred             cEEEEeCchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCH-------HHHH
Confidence            35665 443222111    1244577799999887753       579999999998887654321100       0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .........-+...+|+|+++..++.+..  -.|+.+.+.+
T Consensus       219 ~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        219 ELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence            00000001125678999999999887652  2466666653

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00088  Score=53.67  Aligned_cols=127  Identities=17%  Similarity=0.053  Sum_probs=84.1

Q ss_pred             ceeEEeccCCCHHHHHHhhCC----CcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccEEEc
Q 025054            6 NCLIAQGDLHDHESLVKAIKP----VDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKRFFP   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g----~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~~v~   60 (258)
                      ++.++.+|++|.+++.+++++    .|.+++.++...                   +.+..++++++...  + -+++|.
T Consensus        47 ~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~  125 (240)
T PRK06101         47 NIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-GHRVVI  125 (240)
T ss_pred             CCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCeEEE
Confidence            478889999999999998875    477777775311                   34456777776642  2 245665


Q ss_pred             -CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054           61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG  132 (258)
Q Consensus        61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  132 (258)
                       |+.......    +....|..+|+.++.+.+       ..++.++.++||++.+.+....           ..      
T Consensus       126 isS~~~~~~~----~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-----------~~------  184 (240)
T PRK06101        126 VGSIASELAL----PRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-----------TF------  184 (240)
T ss_pred             EechhhccCC----CCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-----------CC------
Confidence             554332221    224467779999987754       3589999999999877543210           00      


Q ss_pred             CceeeeeccchHHHHHHHHhcCC
Q 025054          133 QPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       133 ~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ..+ ..++.+|+++.+...++..
T Consensus       185 ~~~-~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        185 AMP-MIITVEQASQEIRAQLARG  206 (240)
T ss_pred             CCC-cccCHHHHHHHHHHHHhcC
Confidence            001 1468999999999988764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=97.69  E-value=0.00096  Score=54.12  Aligned_cols=150  Identities=15%  Similarity=0.117  Sum_probs=87.1

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +.++.+|++|.+++.++++       ++|++||+++...                       +...+.++..+++.+.-.
T Consensus        59 ~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g  138 (261)
T PRK08936         59 AIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKG  138 (261)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc
Confidence            5678999999998877664       5799999998531                       112234455555544124


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+......    .+....|..+|+..+.+.+.       .++.++.|+||.+...+..... ..   ... ...+
T Consensus       139 ~iv~~sS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~---~~~-~~~~  209 (261)
T PRK08936        139 NIINMSSVHEQIP----WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKF-AD---PKQ-RADV  209 (261)
T ss_pred             EEEEEccccccCC----CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccccc-CC---HHH-HHHH
Confidence            6776 66433221    12345677799877765543       5899999999988765432100 00   000 0000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g  166 (258)
                       ........+...+|+++.+..++.++ .. .|..+.+.|
T Consensus       210 -~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~  248 (261)
T PRK08936        210 -ESMIPMGYIGKPEEIAAVAAWLASSEASYVTGITLFADG  248 (261)
T ss_pred             -HhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence             00000113667899999999998865 22 344555543

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.00059  Score=55.29  Aligned_cols=161  Identities=14%  Similarity=0.085  Sum_probs=93.3

Q ss_pred             ceeEEeccCCCHHHHHHhh-------CCCcEEEEccCccc---------------------h----hchHHHHHHHHHhC
Q 025054            6 NCLIAQGDLHDHESLVKAI-------KPVDVVISAVGRTE---------------------V----EDQFKLIAAIKEVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~---------------------~----~~~~~li~aa~~~g   53 (258)
                      ++.++.+|+.|.+++.+++       .+.|+|||+++...                     +    ...+.++..+++.+
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  129 (260)
T PRK06523         50 GVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG  129 (260)
T ss_pred             ceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence            4678899999998776544       36799999997310                     1    22244455556666


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-CCCC---CCC
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-QPGA---TAP  121 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-~~~~---~~~  121 (258)
                       ..++|. |+........   .....|..+|+.++.+.+.       .++.+++|+||++.......+. ....   ...
T Consensus       130 -~g~ii~isS~~~~~~~~---~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~  205 (260)
T PRK06523        130 -SGVIIHVTSIQRRLPLP---ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDY  205 (260)
T ss_pred             -CcEEEEEecccccCCCC---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCH
Confidence             678887 6654332111   1245677799998876643       5799999999999876532110 0000   000


Q ss_pred             CCCceEec-cCCCce-eeeeccchHHHHHHHHhcCC-C-CCCceEEEcCCCCcc
Q 025054          122 PRENILFY-GDGQPK-AIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRPPKNIY  171 (258)
Q Consensus       122 ~~~~~~~~-g~g~~~-~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g~~~~~  171 (258)
                      ......+. .-+..+ ..+...+|+|+++..++.+. . ..|+.+.+.| +...
T Consensus       206 ~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdg-g~~~  258 (260)
T PRK06523        206 EGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDG-GTVP  258 (260)
T ss_pred             HHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecC-CccC
Confidence            00000000 000011 12457899999999998764 2 3467787876 4343

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.00056  Score=63.11  Aligned_cols=128  Identities=17%  Similarity=0.209  Sum_probs=85.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hh----chHHHHHHHHHhC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VE----DQFKLIAAIKEVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~----~~~~li~aa~~~g   53 (258)
                      .+.++.+|+.|.+++.++++       ++|++||+++...                     +.    ..+.++..+++.+
T Consensus       421 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  500 (657)
T PRK07201        421 TAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR  500 (657)
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Confidence            47788999999999888776       5899999998420                     11    1233444455666


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       ..++|. |+.+.....    +....|..+|+.++.+.+.       .++.++.|+||.+...+....          ..
T Consensus       501 -~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~----------~~  565 (657)
T PRK07201        501 -FGHVVNVSSIGVQTNA----PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT----------KR  565 (657)
T ss_pred             -CCEEEEECChhhcCCC----CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc----------cc
Confidence             778887 765543221    1234577799999877753       589999999998876543210          00


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                         .+    .....+.+++|+.++..+...
T Consensus       566 ---~~----~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        566 ---YN----NVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             ---cc----CCCCCCHHHHHHHHHHHHHhC
Confidence               01    123578999999999987643

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.67  E-value=0.00061  Score=54.98  Aligned_cols=132  Identities=18%  Similarity=0.192  Sum_probs=88.2

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      ++++..|++|++++.+...       .+|++|+.+|...                       ...++.++.-..+.+ --
T Consensus        58 v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G  136 (265)
T COG0300          58 VEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AG  136 (265)
T ss_pred             EEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence            6789999999988877654       5899999998642                       345566666666666 56


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHH-------HHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRR-------AIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~-------~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|- +|.++....    +-..-|..+|+.+-.       .|+..|+.++.+.||.....|.. ... .    .  . . 
T Consensus       137 ~IiNI~S~ag~~p~----p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~~~-~----~--~-~-  202 (265)
T COG0300         137 HIINIGSAAGLIPT----PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-AKG-S----D--V-Y-  202 (265)
T ss_pred             eEEEEechhhcCCC----cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-ccc-c----c--c-c-
Confidence            7886 554433221    123456679988743       34457899999999998887764 110 0    0  0 0 


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ..  .....+.+.+|+|+.+...+...
T Consensus       203 ~~--~~~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         203 LL--SPGELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             cc--cchhhccCHHHHHHHHHHHHhcC
Confidence            00  11235789999999999999754

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.0018  Score=52.62  Aligned_cols=132  Identities=15%  Similarity=0.142  Sum_probs=80.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~vk   56 (258)
                      .+.++.+|+.|.+++.++++      ++|+|||+++...                   +.+..++++++.    +.+ ..
T Consensus        54 ~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~  132 (263)
T PRK09072         54 RHRWVVADLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SA  132 (263)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CC
Confidence            57889999999988776654      5799999987521                   233344555543    343 45


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|+.++.+++.       .++.++.+.||.+...+......         ..  
T Consensus       133 ~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~---------~~--  197 (263)
T PRK09072        133 MVVNVGSTFGSIGY----PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ---------AL--  197 (263)
T ss_pred             EEEEecChhhCcCC----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc---------cc--
Confidence            6665 443222211    1234566799988766543       47899999998776543211100         00  


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ..  .....+.+.+|+|+.++.+++..
T Consensus       198 ~~--~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        198 NR--ALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             cc--cccCCCCCHHHHHHHHHHHHhCC
Confidence            00  00113568899999999999865

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.59  E-value=0.0019  Score=52.79  Aligned_cols=132  Identities=12%  Similarity=0.103  Sum_probs=82.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|+|||+++...                   +.+..++++++..    .+ -
T Consensus        63 ~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~  141 (273)
T PRK08278         63 QALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-N  141 (273)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-C
Confidence            36688999999998887765       6799999998521                   2344566666643    33 2


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc-cCcCCCCCCCCCCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG-FFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~-~~~~~~~~~~~~~~~~~~~  126 (258)
                      .+++. |+.......  ..++...|..+|+.++.+++.       .++.++.|.||.+.. .+...+.       ..   
T Consensus       142 g~iv~iss~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~-------~~---  209 (273)
T PRK08278        142 PHILTLSPPLNLDPK--WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLL-------GG---  209 (273)
T ss_pred             CEEEEECCchhcccc--ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcc-------cc---
Confidence            45665 543322111  012345677899999988764       479999999985433 2111100       00   


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                           ......+...+|+|+.++.++..+
T Consensus       210 -----~~~~~~~~~p~~va~~~~~l~~~~  233 (273)
T PRK08278        210 -----DEAMRRSRTPEIMADAAYEILSRP  233 (273)
T ss_pred             -----cccccccCCHHHHHHHHHHHhcCc
Confidence                 011113568899999999998775

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.58  E-value=0.0015  Score=52.70  Aligned_cols=150  Identities=11%  Similarity=0.058  Sum_probs=87.6

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~vk   56 (258)
                      +..+.+|++|.+++.++++       +.|++||+++...                   +.....+++++.    +.+.-.
T Consensus        59 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g  138 (253)
T PRK08993         59 FLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGG  138 (253)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe
Confidence            6678999999988887775       5799999997521                   233334444443    332113


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.       .|+.++.++||++-..+...+...     ......+
T Consensus       139 ~iv~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~-----~~~~~~~  209 (253)
T PRK08993        139 KIINIASMLSFQGG----IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD-----EQRSAEI  209 (253)
T ss_pred             EEEEECchhhccCC----CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc-----hHHHHHH
Confidence            6666 554322211    1123566699998876653       589999999999977653321100     0000000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      ...-.. .-+...+|+|+.+..++.+.. . .|..+.+.|
T Consensus       210 ~~~~p~-~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dg  248 (253)
T PRK08993        210 LDRIPA-GRWGLPSDLMGPVVFLASSASDYINGYTIAVDG  248 (253)
T ss_pred             HhcCCC-CCCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            000001 126678999999999998652 2 455665543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.56  E-value=0.0009  Score=52.71  Aligned_cols=184  Identities=16%  Similarity=0.160  Sum_probs=113.4

Q ss_pred             eeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhC---CccEEEcCC---C
Q 025054            7 CLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVG---NIKRFFPTE---Y   63 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g---~vk~~v~S~---~   63 (258)
                      .++..||++|...|.+.+.  ..+-|+|+++...               ..++.+|++|.+.++   +|+-+-.|+   |
T Consensus        85 mkLHYgDmTDss~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSEly  164 (376)
T KOG1372|consen   85 MKLHYGDMTDSSCLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELY  164 (376)
T ss_pred             eEEeeccccchHHHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhc
Confidence            5778899999999999887  4577888877542               356789999998875   144333343   4


Q ss_pred             CCCC----CCCCCCCCCccchhhHHHHHH----HHHhCCCCeEEEecCcccccCcCCCCC----------CCCCCCCCCc
Q 025054           64 GSNV----DAGHPIEPAKSGYARKAKIRR----AIEAEGIPHTYVSCNCSFGFFLPTMAQ----------PGATAPPREN  125 (258)
Q Consensus        64 ~~~~----~~~~~~~~~~~~~~~k~~~e~----~l~~~~~~~t~lr~~~~~~~~~~~~~~----------~~~~~~~~~~  125 (258)
                      |-..    .+..+.-|.+||..+|-..--    +-++.++   +-+.|+.|..-.|....          .+.+-+....
T Consensus       165 Gkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnm---fAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe  241 (376)
T KOG1372|consen  165 GKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNM---FACNGILFNHESPRRGENFVTRKITRSVAKISLGQQE  241 (376)
T ss_pred             ccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcc---eeeccEeecCCCCccccchhhHHHHHHHHHhhhccee
Confidence            4221    122344466777665544321    1112222   22344455422221100          0001122223


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHH
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTED  196 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~  196 (258)
                      ....|+-+..++|=+..|..+++...|.++  ....|.|.. ++..|.+|+.+..-...|+.+.++.-..+
T Consensus       242 ~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d--~PdDfViAT-ge~hsVrEF~~~aF~~ig~~l~Weg~gv~  309 (376)
T KOG1372|consen  242 KIELGNLSALRDWGHAGDYVEAMWLMLQQD--SPDDFVIAT-GEQHSVREFCNLAFAEIGEVLNWEGEGVD  309 (376)
T ss_pred             eEEecchhhhcccchhHHHHHHHHHHHhcC--CCCceEEec-CCcccHHHHHHHHHHhhCcEEeecccccc
Confidence            445688889999999999999999999876  333455543 57999999999999999987777654443

>PRK07578 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.002  Score=49.96  Aligned_cols=132  Identities=20%  Similarity=0.162  Sum_probs=82.2

Q ss_pred             EEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccEEEc-CCC
Q 025054            9 IAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKRFFP-TEY   63 (258)
Q Consensus         9 ~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~~v~-S~~   63 (258)
                      .+.+|+.|.+++.++++   +.|+|||+++...                   +....++++++...  + -.+++. |+.
T Consensus        35 ~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss~  113 (199)
T PRK07578         35 DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSGI  113 (199)
T ss_pred             ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEccc
Confidence            46789999998888776   6899999997421                   22334566665431  2 245776 554


Q ss_pred             CCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceee
Q 025054           64 GSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAI  137 (258)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  137 (258)
                      .....    .+....|..+|+.++.+.+.      .++.++.|+||++-..+...    .       . .+++     ..
T Consensus       114 ~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~----~-------~-~~~~-----~~  172 (199)
T PRK07578        114 LSDEP----IPGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKY----G-------P-FFPG-----FE  172 (199)
T ss_pred             ccCCC----CCCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhh----h-------h-cCCC-----CC
Confidence            43221    12244577799988876653      47899999998775432110    0       0 0111     13


Q ss_pred             eeccchHHHHHHHHhcCCCCCCceEE
Q 025054          138 FNKEEDIATYTIKAVDDPRTLNKTLY  163 (258)
Q Consensus       138 ~v~~~D~a~~~~~~l~~~~~~~~~~~  163 (258)
                      ++..+|+|+.+..+++.. ..|+.++
T Consensus       173 ~~~~~~~a~~~~~~~~~~-~~g~~~~  197 (199)
T PRK07578        173 PVPAARVALAYVRSVEGA-QTGEVYK  197 (199)
T ss_pred             CCCHHHHHHHHHHHhccc-eeeEEec
Confidence            578999999999998764 2455554

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=97.50  E-value=0.0016  Score=51.98  Aligned_cols=146  Identities=13%  Similarity=0.076  Sum_probs=87.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH-----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI-----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa-----~~~g~   54 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +....++++++     ++.+ 
T Consensus        49 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-  127 (239)
T TIGR01831        49 NARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-  127 (239)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-
Confidence            37889999999998877665       4699999887421                   23344555554     2234 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.......    +....|..+|+..+.+.+.       .++.++.++||.+...+.......     .....
T Consensus       128 ~~~iv~vsS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~  198 (239)
T TIGR01831       128 GGRIITLASVSGVMGN----RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD-----LDEAL  198 (239)
T ss_pred             CeEEEEEcchhhccCC----CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH-----HHHHH
Confidence            467887 664332221    1234566789877655542       589999999998876654321100     00000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEc
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLR  165 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~  165 (258)
                      ...+    ...+...+|+|+++..++..+ .. .|..+.+.
T Consensus       199 ~~~~----~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~  235 (239)
T TIGR01831       199 KTVP----MNRMGQPAEVASLAGFLMSDGASYVTRQVISVN  235 (239)
T ss_pred             hcCC----CCCCCCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence            0010    012557899999999998865 22 34455554

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.0013  Score=53.53  Aligned_cols=151  Identities=18%  Similarity=0.160  Sum_probs=88.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~   57 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.+..+++.++...  ++-.+
T Consensus        59 ~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~  138 (264)
T PRK07576         59 EGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGAS  138 (264)
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCE
Confidence            35678999999998888765       4699999986311                   33445666665431  10147


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc-cCcCCCCCCCCCCCCCCceEe
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG-FFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~-~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      +|. |+......    .+....|..+|..++.+.+.       .++.++.++||.+.+ ....... ..    ...... 
T Consensus       139 iv~iss~~~~~~----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~-~~----~~~~~~-  208 (264)
T PRK07576        139 IIQISAPQAFVP----MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLA-PS----PELQAA-  208 (264)
T ss_pred             EEEECChhhccC----CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcc-cC----HHHHHH-
Confidence            776 66433221    11234566799999887764       478999999998764 2111110 00    000000 


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .........+...+|+|+++..++.++.  ..|..+.+.|
T Consensus       209 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~g  248 (264)
T PRK07576        209 VAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLPVDG  248 (264)
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEEECC
Confidence            0000001125678999999999998652  2466777765

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=97.48  E-value=0.00069  Score=50.99  Aligned_cols=96  Identities=18%  Similarity=0.254  Sum_probs=67.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v   59 (258)
                      .+.++.+|+++.+++.++++       ..|.|||+++...                   +....++++++++.+ .++++
T Consensus        54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii  132 (180)
T smart00822       54 EVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFV  132 (180)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEE
Confidence            35678899999888877655       3599999997321                   455678888887777 78888


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---CCCCeEEEecCccc
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSF  106 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~  106 (258)
                      . |+.......    .....|..+|..++.+++.   .+++.+.+.+|.+-
T Consensus       133 ~~ss~~~~~~~----~~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      133 LFSSVAGVLGN----PGQANYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             EEccHHHhcCC----CCchhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence            7 665443221    1234566789988887653   68899999988653

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.0014  Score=53.33  Aligned_cols=156  Identities=15%  Similarity=0.126  Sum_probs=92.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      ++.++.+|++|++++.++++      +.|++||+++...                       +...+.++...++.+ ..
T Consensus        59 ~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g  137 (263)
T PRK08339         59 DVSYIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FG  137 (263)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CC
Confidence            47789999999998888775      5799999987421                       223466666666666 67


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-CCC-CCCC-CCc
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-PGA-TAPP-REN  125 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~~~-~~~~-~~~  125 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||.+...+...... ... .... ...
T Consensus       138 ~Ii~isS~~~~~~~----~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  213 (263)
T PRK08339        138 RIIYSTSVAIKEPI----PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEA  213 (263)
T ss_pred             EEEEEcCccccCCC----CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHH
Confidence            8887 665433211    1233456689998876653       57999999999887654321100 000 0000 000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      ...........-+...+|+|.++..++.+. . -.|+.+.+.|
T Consensus       214 ~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdg  256 (263)
T PRK08339        214 LQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDG  256 (263)
T ss_pred             HHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECC
Confidence            000000000012567899999999998764 2 2456666654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.46  E-value=0.0016  Score=57.32  Aligned_cols=149  Identities=12%  Similarity=0.068  Sum_probs=88.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC---Ccc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG---NIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g---~vk   56 (258)
                      +..++.+|++|.+++.++++       +.|+|||+++...                   +.+..++.+++....   +-.
T Consensus       257 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g  336 (450)
T PRK08261        257 GGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGG  336 (450)
T ss_pred             CCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCC
Confidence            45678899999988777665       5799999998431                   345566667765533   025


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      +||. |+.......    +....|..+|..++.+++.       .++..+.+.||.+-..+...+.. . .......+.-
T Consensus       337 ~iv~~SS~~~~~g~----~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~-~-~~~~~~~~~~  410 (450)
T PRK08261        337 RIVGVSSISGIAGN----RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF-A-TREAGRRMNS  410 (450)
T ss_pred             EEEEECChhhcCCC----CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch-h-HHHHHhhcCC
Confidence            7776 654332211    1245677799977666543       58999999999765432211100 0 0000001100


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .      ......+|+|+++..++....  -.|+.+.++|
T Consensus       411 l------~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g  444 (450)
T PRK08261        411 L------QQGGLPVDVAETIAWLASPASGGVTGNVVRVCG  444 (450)
T ss_pred             c------CCCCCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence            1      112356799999999887542  2477888875

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.45  E-value=0.0023  Score=51.07  Aligned_cols=148  Identities=11%  Similarity=0.044  Sum_probs=85.0

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhC-
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVG-   53 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g-   53 (258)
                      .|+.++.+|+.|.+++.++++       +.|++||+++...                   +...    +.++...++.+ 
T Consensus        46 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~  125 (236)
T PRK06483         46 AGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH  125 (236)
T ss_pred             cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC
Confidence            457788999999888776554       4799999987421                   1112    23333333322 


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      +..++|+ |+.......    +....|..+|+.++.+.+.      .++.+..|+||++......   ...   .. .. 
T Consensus       126 ~~g~iv~~ss~~~~~~~----~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~---~~~---~~-~~-  193 (236)
T PRK06483        126 AASDIIHITDYVVEKGS----DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD---DAA---YR-QK-  193 (236)
T ss_pred             CCceEEEEcchhhccCC----CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC---CHH---HH-HH-
Confidence            0246777 654332211    1234677799999988764      3589999999987432110   000   00 00 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                       ........+ +...+|+++++..++...--.|+.+.+.|
T Consensus       194 -~~~~~~~~~-~~~~~~va~~~~~l~~~~~~~G~~i~vdg  231 (236)
T PRK06483        194 -ALAKSLLKI-EPGEEEIIDLVDYLLTSCYVTGRSLPVDG  231 (236)
T ss_pred             -HhccCcccc-CCCHHHHHHHHHHHhcCCCcCCcEEEeCc
Confidence             000000111 34689999999999874433566777764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.44  E-value=0.0053  Score=49.30  Aligned_cols=129  Identities=12%  Similarity=0.057  Sum_probs=78.0

Q ss_pred             ceeEEeccCC--CHHHHHHh-------hCCCcEEEEccCccc--------------------hhchHHHHHHH----HHh
Q 025054            6 NCLIAQGDLH--DHESLVKA-------IKPVDVVISAVGRTE--------------------VEDQFKLIAAI----KEV   52 (258)
Q Consensus         6 gv~~~~~D~~--d~~~l~~a-------l~g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~   52 (258)
                      .+.++.+|++  +.+++.++       +...|+|||+++...                    +.+..++++++    ++.
T Consensus        63 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~  142 (247)
T PRK08945         63 QPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS  142 (247)
T ss_pred             CceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC
Confidence            3567778886  45444433       346899999987421                    23333444444    456


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      + .++||+ |+.......    +....|..+|+.++.+++.       .++.++.++||.+-.......  +        
T Consensus       143 ~-~~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~--~--------  207 (247)
T PRK08945        143 P-AASLVFTSSSVGRQGR----ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA--F--------  207 (247)
T ss_pred             C-CCEEEEEccHhhcCCC----CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh--c--------
Confidence            6 788887 665433221    1234677799998887653       478899999987654321110  0        


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                          ..  .....+...+|++..+..++.++
T Consensus       208 ----~~--~~~~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        208 ----PG--EDPQKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             ----Cc--ccccCCCCHHHHHHHHHHHhCcc
Confidence                00  00113568899999999988765

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.43  E-value=0.008  Score=50.11  Aligned_cols=145  Identities=13%  Similarity=0.110  Sum_probs=83.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHHHHHHHHH----h----
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----V----   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~----   52 (258)
                      .+.++.+|+.|.+++.++++      ++|+|||+++...                   +.+..++++++..    .    
T Consensus        63 ~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~  142 (306)
T PRK07792         63 KAVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAA  142 (306)
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccc
Confidence            36788999999988877664      5899999997521                   2344455555432    1    


Q ss_pred             C-C-ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC
Q 025054           53 G-N-IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP  122 (258)
Q Consensus        53 g-~-vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~  122 (258)
                      + . -.++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.|+. ...+....  +.  ...
T Consensus       143 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~--~~--~~~  213 (306)
T PRK07792        143 GGPVYGRIVNTSSEAGLVGP----VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADV--FG--DAP  213 (306)
T ss_pred             CCCCCcEEEEECCcccccCC----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhh--cc--ccc
Confidence            0 0 136776 554322211    1234577799999877643       579999999973 21111110  00  000


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                        .  ..   .......+.+|++.+++.++....  ..|+.+.+.|
T Consensus       214 --~--~~---~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~g  252 (306)
T PRK07792        214 --D--VE---AGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYG  252 (306)
T ss_pred             --h--hh---hhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcC
Confidence              0  00   011234578999999998887642  3466666654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.40  E-value=0.0035  Score=50.84  Aligned_cols=147  Identities=12%  Similarity=0.099  Sum_probs=86.5

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhc----hHHHHHHHHHh
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VED----QFKLIAAIKEV   52 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~----~~~li~aa~~~   52 (258)
                      +.++.+|++|++++.++++       +.|++||+++..       .                +..    .+.++...++.
T Consensus        61 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~  140 (258)
T PRK07370         61 SLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG  140 (258)
T ss_pred             ceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC
Confidence            5678899999998887664       579999998742       1                112    23333333332


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                         .++|. |+......    .+....|..+|+.++.+.+.       .|+.+..|.||++...+...+...  .  .  
T Consensus       141 ---g~Iv~isS~~~~~~----~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~--~--~--  207 (258)
T PRK07370        141 ---GSIVTLTYLGGVRA----IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI--L--D--  207 (258)
T ss_pred             ---CeEEEEeccccccC----CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc--h--h--
Confidence               36776 66543321    12234577799999877654       579999999998876543211000  0  0  


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...-........-+...+|++.++..++.++.  -.|+.+.+-|
T Consensus       208 ~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdg  251 (258)
T PRK07370        208 MIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDA  251 (258)
T ss_pred             hhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECC
Confidence            00000000000125678999999999987652  2366666654

>PRK06924 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.00059  Score=54.93  Aligned_cols=151  Identities=11%  Similarity=0.014  Sum_probs=85.3

Q ss_pred             ceeEEeccCCCHHHHHHhhCCC---------c--EEEEccCccc--------------------h----hchHHHHHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIKPV---------D--VVISAVGRTE--------------------V----EDQFKLIAAIK   50 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~---------d--~Vi~~~~~~~--------------------~----~~~~~li~aa~   50 (258)
                      +++++.+|++|.+++.++++.+         +  .++++++...                    +    ...+.++..++
T Consensus        49 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  128 (251)
T PRK06924         49 NLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTK  128 (251)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHh
Confidence            5788999999999988877532         1  5677665310                    1    12345555555


Q ss_pred             HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054           51 EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATA  120 (258)
Q Consensus        51 ~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~  120 (258)
                      +.+..+++|. |+......    .++...|..+|+.++.+.+.         .++.+..|+||++-.++...........
T Consensus       129 ~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~  204 (251)
T PRK06924        129 DWKVDKRVINISSGAAKNP----YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKED  204 (251)
T ss_pred             ccCCCceEEEecchhhcCC----CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCccc
Confidence            5331457777 65433211    22345677799999887652         3688999999988765432110000000


Q ss_pred             CC-CCc-eEeccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEE
Q 025054          121 PP-REN-ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYL  164 (258)
Q Consensus       121 ~~-~~~-~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l  164 (258)
                      .. ... ......    -.+.+.+|+|+.+..++.++. ..|+.+.+
T Consensus       205 ~~~~~~~~~~~~~----~~~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        205 FTNLDRFITLKEE----GKLLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             chHHHHHHHHhhc----CCcCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence            00 000 000111    126789999999999998743 23444444

>PRK06484 short chain dehydrogenase; Validated

Probab=97.39  E-value=0.0019  Score=57.89  Aligned_cols=150  Identities=17%  Similarity=0.159  Sum_probs=90.7

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHh--CCccE
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEV--GNIKR   57 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~--g~vk~   57 (258)
                      +..+.+|++|++++.++++       ..|++||+++...                    +.+...+++++...  + -.+
T Consensus       317 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~  395 (520)
T PRK06484        317 HLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ-GGV  395 (520)
T ss_pred             eeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc-CCE
Confidence            5568999999998887765       4799999987421                    23344555555432  2 247


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +|. |+......    .++...|..+|+.++.+.+.       .|+.++.|+||++...+.........  .....+  .
T Consensus       396 iv~isS~~~~~~----~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~--~  467 (520)
T PRK06484        396 IVNLGSIASLLA----LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGR--ADFDSI--R  467 (520)
T ss_pred             EEEECchhhcCC----CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccH--HHHHHH--H
Confidence            777 66544322    12345677799999877654       47999999999887654322110000  000000  0


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .......+...+|+|++++.++.+..  ..|+.+.+.|
T Consensus       468 -~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdg  505 (520)
T PRK06484        468 -RRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDG  505 (520)
T ss_pred             -hcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence             00000125688999999999987642  3466777764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.38  E-value=0.0021  Score=51.95  Aligned_cols=151  Identities=12%  Similarity=0.115  Sum_probs=86.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHhC-C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEVG-N   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~g-~   54 (258)
                      .+..+.+|++|++++.++++       ..|++||.++..       .                +.....++.++...- +
T Consensus        56 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~  135 (252)
T PRK06079         56 EDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP  135 (252)
T ss_pred             ceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc
Confidence            46788999999988877654       479999998742       0                112233333333210 0


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.+.....    +....|..+|+.++.+.+.       .|+.+..|.||.+-..+...+...     . ...
T Consensus       136 ~g~Iv~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~-----~-~~~  205 (252)
T PRK06079        136 GASIVTLTYFGSERAI----PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH-----K-DLL  205 (252)
T ss_pred             CceEEEEeccCccccC----CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh-----H-HHH
Confidence            135665 655432211    1234566799999877753       579999999998876543221100     0 000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      ...........+...+|+|+++..++.+. . -.|+.+.+.|
T Consensus       206 ~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdg  247 (252)
T PRK06079        206 KESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDK  247 (252)
T ss_pred             HHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEeCC
Confidence            00000000012678899999999998764 2 2466666654

>PRK07023 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.001  Score=53.25  Aligned_cols=99  Identities=14%  Similarity=0.063  Sum_probs=67.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-----------CCcEEEEccCccc--------------------hhc----hHHHHHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIK-----------PVDVVISAVGRTE--------------------VED----QFKLIAAIK   50 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-----------g~d~Vi~~~~~~~--------------------~~~----~~~li~aa~   50 (258)
                      .+.++.+|+.|.+++.++++           +.|++||+++...                    +.+    .+.++.+++
T Consensus        46 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  125 (243)
T PRK07023         46 RLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAAS  125 (243)
T ss_pred             eEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhh
Confidence            47788999999998887442           3688999986421                    122    345555555


Q ss_pred             HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccC
Q 025054           51 EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFF  109 (258)
Q Consensus        51 ~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~  109 (258)
                      +.+ .+++|. |+......    .++...|..+|..++.+++.      .++.+..|+||++-..+
T Consensus       126 ~~~-~~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  186 (243)
T PRK07023        126 DAA-ERRILHISSGAARNA----YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGM  186 (243)
T ss_pred             ccC-CCEEEEEeChhhcCC----CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHH
Confidence            555 678888 76543321    12344577799999988863      47999999999876543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=97.36  E-value=0.0054  Score=48.79  Aligned_cols=142  Identities=15%  Similarity=0.070  Sum_probs=85.0

Q ss_pred             CceeEEeccCCCHHHHHHh---hCCCcEEEEccCccc-----------------------------hhchHHHHHHHHHh
Q 025054            5 INCLIAQGDLHDHESLVKA---IKPVDVVISAVGRTE-----------------------------VEDQFKLIAAIKEV   52 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~a---l~g~d~Vi~~~~~~~-----------------------------~~~~~~li~aa~~~   52 (258)
                      ..+.++++|++|.+++.+.   +.+.|+|||+++...                             ....+.++..+++.
T Consensus        43 ~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~  122 (235)
T PRK09009         43 DNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS  122 (235)
T ss_pred             CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc
Confidence            3577899999998876654   557899999998531                             11223344444444


Q ss_pred             CCccEEEc-CC-CCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCC
Q 025054           53 GNIKRFFP-TE-YGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAP  121 (258)
Q Consensus        53 g~vk~~v~-S~-~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~  121 (258)
                      + ..+++. |+ .+.....  +.++...|..+|+.++.+.+.         .++.+..+.||.+...+.....       
T Consensus       123 ~-~~~i~~iss~~~~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~-------  192 (235)
T PRK09009        123 E-SAKFAVISAKVGSISDN--RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ-------  192 (235)
T ss_pred             C-CceEEEEeecccccccC--CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh-------
Confidence            4 456665 54 3321111  112234567799999887753         2677888899887665432110       


Q ss_pred             CCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEc
Q 025054          122 PRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLR  165 (258)
Q Consensus       122 ~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~  165 (258)
                       . .  .+     ...+.+.+|+|+.+..++....  ..|..+.+-
T Consensus       193 -~-~--~~-----~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~  229 (235)
T PRK09009        193 -Q-N--VP-----KGKLFTPEYVAQCLLGIIANATPAQSGSFLAYD  229 (235)
T ss_pred             -h-c--cc-----cCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeC
Confidence             0 0  01     1125688999999999998752  245555554

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.35  E-value=0.002  Score=54.13  Aligned_cols=102  Identities=19%  Similarity=0.210  Sum_probs=62.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|+.|.+++.++++       +.|+|||+++...                    +.+...+++++    ++.+.
T Consensus        56 ~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~  135 (322)
T PRK07453         56 SYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPA  135 (322)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC
Confidence            47888999999998888775       3899999987310                    22233444443    34431


Q ss_pred             -ccEEEc-CCCCCCCC------------C-------------------CCCCCCCccchhhHHHHHHHH----Hh----C
Q 025054           55 -IKRFFP-TEYGSNVD------------A-------------------GHPIEPAKSGYARKAKIRRAI----EA----E   93 (258)
Q Consensus        55 -vk~~v~-S~~~~~~~------------~-------------------~~~~~~~~~~~~~k~~~e~~l----~~----~   93 (258)
                       ..|+|. |+......            .                   ..+..+...|..+|...+.+.    ++    .
T Consensus       136 ~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~  215 (322)
T PRK07453        136 PDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHEST  215 (322)
T ss_pred             CCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccC
Confidence             358887 65322110            0                   011223456777998764433    32    3


Q ss_pred             CCCeEEEecCcccc
Q 025054           94 GIPHTYVSCNCSFG  107 (258)
Q Consensus        94 ~~~~t~lr~~~~~~  107 (258)
                      ++.++.++||++++
T Consensus       216 gi~v~~v~PG~v~~  229 (322)
T PRK07453        216 GITFSSLYPGCVAD  229 (322)
T ss_pred             CeEEEEecCCcccC
Confidence            79999999999975

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0024  Score=51.87  Aligned_cols=156  Identities=10%  Similarity=0.078  Sum_probs=88.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|.+++.++++       ++|++||+++...                       +...+.++...++.+ .
T Consensus        60 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  138 (265)
T PRK07062         60 RLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-A  138 (265)
T ss_pred             eEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-C
Confidence            46678999999988876554       5799999997421                       122345555556555 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCC-CCCCCCCCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPT-MAQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~-~~~~~~~~~~~~~~  126 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.++.|+||++....... +.............
T Consensus       139 g~iv~isS~~~~~~~----~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~  214 (265)
T PRK07062        139 ASIVCVNSLLALQPE----PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAW  214 (265)
T ss_pred             cEEEEeccccccCCC----CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHH
Confidence            67887 665432211    1234566688887765542       58999999999887654321 00000000000000


Q ss_pred             --Eec-cCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          127 --LFY-GDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       127 --~~~-g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                        .+. -......-+...+|+|.+++.++.+. . -.|+.+.+-|
T Consensus       215 ~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg  259 (265)
T PRK07062        215 TAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSG  259 (265)
T ss_pred             HHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcC
Confidence              000 00000012567899999999988754 2 2466666654

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.0052  Score=49.53  Aligned_cols=152  Identities=13%  Similarity=0.031  Sum_probs=86.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|+|||+++...                   +.+..++++++.    +.+.-
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  130 (252)
T PRK07677         51 QVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIK  130 (252)
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCC
Confidence            47789999999988877664       5799999987321                   233445666663    22212


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      .++|. |+.......    +...+|..+|+.++.+.+.        .|++++.|+||.+.......  ... ....... 
T Consensus       131 g~ii~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~--~~~-~~~~~~~-  202 (252)
T PRK07677        131 GNIINMVATYAWDAG----PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGAD--KLW-ESEEAAK-  202 (252)
T ss_pred             EEEEEEcChhhccCC----CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccc--ccc-CCHHHHH-
Confidence            46776 544322111    1234677799998876652        47999999999887422110  000 0000000 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+...-. ..-+...+|+++++..++..+.  -.|..+.+.|
T Consensus       203 ~~~~~~~-~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g  243 (252)
T PRK07677        203 RTIQSVP-LGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDG  243 (252)
T ss_pred             HHhccCC-CCCCCCHHHHHHHHHHHcCccccccCCCEEEECC
Confidence            0000000 0126688999999988887642  2455666654

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0025  Score=53.06  Aligned_cols=104  Identities=14%  Similarity=0.034  Sum_probs=66.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHHhCCccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKEVGNIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~~g~vk~   57 (258)
                      .+.++.+|+.|.+++.++++       +.|+|||+++...                     ....+.++..+++.+ ..+
T Consensus        68 ~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~  146 (306)
T PRK06197         68 DVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSR  146 (306)
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCE
Confidence            47788999999998877654       5799999997421                     122566777777776 678


Q ss_pred             EEc-CCCCCCC-C-----C---CCCCCCCccchhhHHHHHHHHHh-------CCCCeEEE--ecCcccccCc
Q 025054           58 FFP-TEYGSNV-D-----A---GHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYV--SCNCSFGFFL  110 (258)
Q Consensus        58 ~v~-S~~~~~~-~-----~---~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~l--r~~~~~~~~~  110 (258)
                      +|. |+.+... .     .   .....+...|..+|+..+.+.+.       .+++.+++  .||++...+.
T Consensus       147 iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~  218 (306)
T PRK06197        147 VVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA  218 (306)
T ss_pred             EEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence            887 6643211 0     0   01122334577799988876653       35655544  6988766543

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0014  Score=54.32  Aligned_cols=138  Identities=14%  Similarity=0.090  Sum_probs=81.7

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh---CCccE
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV---GNIKR   57 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~---g~vk~   57 (258)
                      +..+.+|++|.+++.++++       +.|+|||+++...                   +.+..++++++...   . ..+
T Consensus        59 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~  137 (296)
T PRK05872         59 VLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGY  137 (296)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCE
Confidence            3445699999988877654       5799999998521                   23334455554321   2 247


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-Ee
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-LF  128 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-~~  128 (258)
                      +|. |+.......    +....|..+|+.++.+.+.       .++.++++.||++...+.......    .  ... .+
T Consensus       138 iv~isS~~~~~~~----~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~----~--~~~~~~  207 (296)
T PRK05872        138 VLQVSSLAAFAAA----PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD----L--PAFREL  207 (296)
T ss_pred             EEEEeCHhhcCCC----CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc----c--hhHHHH
Confidence            877 665433221    1244677799999877653       589999999998876543221000    0  000 00


Q ss_pred             ccCCC-ceeeeeccchHHHHHHHHhcCC
Q 025054          129 YGDGQ-PKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       129 ~g~g~-~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ...-. ....+.+.+|+|+++..++...
T Consensus       208 ~~~~~~p~~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        208 RARLPWPLRRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             HhhCCCcccCCCCHHHHHHHHHHHHhcC
Confidence            00000 0113568899999999988764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.23  E-value=0.011  Score=47.89  Aligned_cols=154  Identities=12%  Similarity=0.017  Sum_probs=86.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHH----
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIK----   50 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~----   50 (258)
                      .+.++.+|+.|.+++.++++       ..|++||+++...                        +.....+++++.    
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  132 (263)
T PRK06200         53 HVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALK  132 (263)
T ss_pred             cceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHH
Confidence            36788999999988877764       5799999998421                        112233444443    


Q ss_pred             HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCC--C
Q 025054           51 EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATA--P  121 (258)
Q Consensus        51 ~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~--~  121 (258)
                      +.+  .++|. |+.......    +....|..+|+.++.+.+.      .++.+..|.||++...+..... .....  .
T Consensus       133 ~~~--g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~-~~~~~~~~  205 (263)
T PRK06200        133 ASG--GSMIFTLSNSSFYPG----GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPAS-LGQGETSI  205 (263)
T ss_pred             hcC--CEEEEECChhhcCCC----CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccc-cCCCCccc
Confidence            222  35666 554332211    1234577799999887764      3589999999988765432110 00000  0


Q ss_pred             C--CCceEeccCCCceeeeeccchHHHHHHHHhcCC-C--CCCceEEEcC
Q 025054          122 P--RENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R--TLNKTLYLRP  166 (258)
Q Consensus       122 ~--~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~--~~~~~~~l~g  166 (258)
                      .  ..............-+...+|+|.++..++.++ .  -.|+.+.+.|
T Consensus       206 ~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdg  255 (263)
T PRK06200        206 SDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADG  255 (263)
T ss_pred             ccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcC
Confidence            0  000000000000112568899999999998755 2  2466666654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.21  E-value=0.0041  Score=50.33  Aligned_cols=143  Identities=8%  Similarity=-0.016  Sum_probs=86.2

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +.++.+|++|.+++.++++       ..|++||.++...                       +...+.++..+++.+ -.
T Consensus        70 ~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g  148 (256)
T PRK12859         70 VSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GG  148 (256)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-Ce
Confidence            5678999999998887764       3699999987421                       122344455555444 45


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+......    .++...|..+|+.++.+.+.       .++.++.|+||.+-..+...-    .   .......
T Consensus       149 ~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~----~---~~~~~~~  217 (256)
T PRK12859        149 RIINMTSGQFQGP----MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE----I---KQGLLPM  217 (256)
T ss_pred             EEEEEcccccCCC----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH----H---HHHHHhc
Confidence            8887 65443221    12345677799999876543       579999999998765432110    0   0000000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEc
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLR  165 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~  165 (258)
                      .  +  ...+...+|+|+++..++... .. .|+.+.+-
T Consensus       218 ~--~--~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  252 (256)
T PRK12859        218 F--P--FGRIGEPKDAARLIKFLASEEAEWITGQIIHSE  252 (256)
T ss_pred             C--C--CCCCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence            0  0  012457899999999988764 22 35555554

>PRK05599 hypothetical protein; Provisional

Probab=97.19  E-value=0.019  Score=46.21  Aligned_cols=135  Identities=12%  Similarity=0.092  Sum_probs=80.8

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~vk   56 (258)
                      +.++.+|+.|.+++.++++       +.|++||+++...                   +...    +.++...++.++-.
T Consensus        51 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g  130 (246)
T PRK05599         51 VHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPA  130 (246)
T ss_pred             eEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCC
Confidence            6788999999988877653       5799999887531                   0111    12223333332114


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.       .++.++.+.||.+...+....        .  .   
T Consensus       131 ~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~--------~--~---  193 (246)
T PRK05599        131 AIVAFSSIAGWRAR----RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM--------K--P---  193 (246)
T ss_pred             EEEEEeccccccCC----cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC--------C--C---
Confidence            6776 554332211    1234566799998766643       578899999998876542210        0  0   


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR  165 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~  165 (258)
                       .    +. ....+|+|+.++.++..++ ..+.+.+.
T Consensus       194 -~----~~-~~~pe~~a~~~~~~~~~~~-~~~~~~~~  223 (246)
T PRK05599        194 -A----PM-SVYPRDVAAAVVSAITSSK-RSTTLWIP  223 (246)
T ss_pred             -C----CC-CCCHHHHHHHHHHHHhcCC-CCceEEeC
Confidence             0    00 2478999999999998763 23445554

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.17  E-value=0.0062  Score=49.37  Aligned_cols=150  Identities=10%  Similarity=0.062  Sum_probs=85.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHhC-C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEVG-N   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~g-~   54 (258)
                      .+..+.+|++|++++.++++       ..|++||+++..       .                +.....+++++...- .
T Consensus        60 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  139 (257)
T PRK08594         60 ESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE  139 (257)
T ss_pred             ceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence            46788999999998877664       479999998632       0                011122333333210 0


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||.+...+........  .. ... 
T Consensus       140 ~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~--~~-~~~-  211 (257)
T PRK08594        140 GGSIVTLTYLGGERVV----QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFN--SI-LKE-  211 (257)
T ss_pred             CceEEEEcccCCccCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcccc--HH-HHH-
Confidence            136776 655433211    1234577799999877653       5799999999988765322110000  00 000 


Q ss_pred             EeccCCCce-eeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPK-AIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~-~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       +..  ..+ ..+...+|+|+++..++.+..  ..|..+.+.|
T Consensus       212 -~~~--~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dg  251 (257)
T PRK08594        212 -IEE--RAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDS  251 (257)
T ss_pred             -Hhh--cCCccccCCHHHHHHHHHHHcCcccccccceEEEECC
Confidence             000  011 125688999999999987642  2456666654

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.015  Score=46.31  Aligned_cols=128  Identities=11%  Similarity=-0.061  Sum_probs=75.9

Q ss_pred             eeEEeccCCC--HHHHHHh-------h-CCCcEEEEccCccc--------------------hhchHHHHHHH----HHh
Q 025054            7 CLIAQGDLHD--HESLVKA-------I-KPVDVVISAVGRTE--------------------VEDQFKLIAAI----KEV   52 (258)
Q Consensus         7 v~~~~~D~~d--~~~l~~a-------l-~g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~   52 (258)
                      +..+.+|+.|  .+++.++       + ...|.|||+++...                    +.+..++++++    ++.
T Consensus        58 ~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~  137 (239)
T PRK08703         58 PFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS  137 (239)
T ss_pred             cceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC
Confidence            4567788864  3333333       3 35799999998420                    22223344444    444


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------C-CCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------E-GIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~-~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                      + -.+++. |+......    .+....|..+|+.++.+.+.       . ++.++.|+||.+.+...... .        
T Consensus       138 ~-~~~iv~~ss~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~-~--------  203 (239)
T PRK08703        138 P-DASVIFVGESHGETP----KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS-H--------  203 (239)
T ss_pred             C-CCEEEEEeccccccC----CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc-C--------
Confidence            4 457776 55332211    11234577799999887653       2 58899999999887643211 0        


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                           ++  .....+...+|++..+..++...
T Consensus       204 -----~~--~~~~~~~~~~~~~~~~~~~~~~~  228 (239)
T PRK08703        204 -----PG--EAKSERKSYGDVLPAFVWWASAE  228 (239)
T ss_pred             -----CC--CCccccCCHHHHHHHHHHHhCcc
Confidence                 11  11123568999999999998753

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.012  Score=48.24  Aligned_cols=153  Identities=13%  Similarity=0.121  Sum_probs=86.1

Q ss_pred             eeEEeccCCCHHHHHHhhC------CCcEEEEccCccc------------hhchHHHHHHHHH----hCCccEEEc-CCC
Q 025054            7 CLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE------------VEDQFKLIAAIKE----VGNIKRFFP-TEY   63 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~------------~~~~~~li~aa~~----~g~vk~~v~-S~~   63 (258)
                      +.++.+|++|.+++.++++      +.|++||+++...            +.+..++++++..    .| . .++. |..
T Consensus        51 ~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g-~-iv~isS~~  128 (275)
T PRK06940         51 VSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGG-A-GVVIASQS  128 (275)
T ss_pred             EEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCC-C-EEEEEecc
Confidence            6778999999998887764      5899999998532            3344555555533    24 2 2333 443


Q ss_pred             CCCCCCC------------------C----C--C-CCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcC
Q 025054           64 GSNVDAG------------------H----P--I-EPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLP  111 (258)
Q Consensus        64 ~~~~~~~------------------~----~--~-~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~  111 (258)
                      +......                  .    .  . .....|..+|+..+.+.+.       .|+.+..|.||++...+..
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~  208 (275)
T PRK06940        129 GHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQ  208 (275)
T ss_pred             cccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccch
Confidence            3221100                  0    0  0 1124566799998766543       5799999999988765432


Q ss_pred             CCCCCCCCCCCCCce-EeccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054          112 TMAQPGATAPPRENI-LFYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP  166 (258)
Q Consensus       112 ~~~~~~~~~~~~~~~-~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g  166 (258)
                      .... .   ...... .+... ...--+...+|+|+++..++.+. .. .|..+.+-|
T Consensus       209 ~~~~-~---~~~~~~~~~~~~-~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdg  261 (275)
T PRK06940        209 DELN-G---PRGDGYRNMFAK-SPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDG  261 (275)
T ss_pred             hhhc-C---CchHHHHHHhhh-CCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcC
Confidence            1000 0   000000 00000 00012678899999999988754 22 456666654

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0072  Score=47.82  Aligned_cols=101  Identities=14%  Similarity=0.045  Sum_probs=63.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-----CCcEEEEccCccc---------------------hhchHHHHHHHHH---hCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-----PVDVVISAVGRTE---------------------VEDQFKLIAAIKE---VGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-----g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~---~g~vk   56 (258)
                      ++.+..+|++|++++.++++     +.|+|||+++...                     +.....+++++..   .+ ..
T Consensus        46 ~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~  124 (225)
T PRK08177         46 GVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QG  124 (225)
T ss_pred             ccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CC
Confidence            46788899999988877665     5899999986421                     2234455555532   22 24


Q ss_pred             EEEc-CC-CCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccC
Q 025054           57 RFFP-TE-YGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFF  109 (258)
Q Consensus        57 ~~v~-S~-~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~  109 (258)
                      +++. |+ ++.....  +......|..+|+.++.+++.       .++.++.++||++-..+
T Consensus       125 ~iv~~ss~~g~~~~~--~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        125 VLAFMSSQLGSVELP--DGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             EEEEEccCccccccC--CCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence            5665 44 3332111  111233566799999988764       46889999998775543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.05  E-value=0.0089  Score=48.54  Aligned_cols=156  Identities=13%  Similarity=0.034  Sum_probs=87.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------------------------hhchHHHHHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------------------------VEDQFKLIAAIK   50 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------------------------~~~~~~li~aa~   50 (258)
                      ++.++.+|+.|++++.++++       ..|+|||+++...                            +.....+++++.
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  129 (266)
T PRK06171         50 NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVA  129 (266)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHH
Confidence            46788899999998887665       5799999987410                            223345555554


Q ss_pred             H----hCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc-cCcC-CCCC-
Q 025054           51 E----VGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG-FFLP-TMAQ-  115 (258)
Q Consensus        51 ~----~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~-~~~~-~~~~-  115 (258)
                      .    .+ -.++|. |+.......    +....|..+|+.++.+.+.       .++.+..|+||.+.. .+.. .... 
T Consensus       130 ~~~~~~~-~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~  204 (266)
T PRK06171        130 RQMVKQH-DGVIVNMSSEAGLEGS----EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEA  204 (266)
T ss_pred             HHHHhcC-CcEEEEEccccccCCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhh
Confidence            3    33 356877 654432221    1234667799998877654       589999999998752 2211 0000 


Q ss_pred             CCCC-CCCCCc-e-Eecc-CCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          116 PGAT-APPREN-I-LFYG-DGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       116 ~~~~-~~~~~~-~-~~~g-~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      .... ...... . .+.. .......+...+|+|.++..++.+.. . .|..+.+.|
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdg  261 (266)
T PRK06171        205 LAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAG  261 (266)
T ss_pred             hccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecC
Confidence            0000 000000 0 0000 00000124678999999999887642 2 356666654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.04  E-value=0.011  Score=47.96  Aligned_cols=149  Identities=13%  Similarity=0.061  Sum_probs=85.2

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHH---h
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKE---V   52 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~---~   52 (258)
                      ...+.+|+.|++++.++++       +.|++||+++...                        +.....+.+++..   .
T Consensus        58 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~  137 (261)
T PRK08690         58 ELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG  137 (261)
T ss_pred             ceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh
Confidence            4568899999998887664       5899999987421                        0111122222211   1


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      + -.++|. |+.+....    .+....|..+|+.++.+.+.       .|+.+..|.||++-..+...+...     ...
T Consensus       138 ~-~g~Iv~iss~~~~~~----~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~-----~~~  207 (261)
T PRK08690        138 R-NSAIVALSYLGAVRA----IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF-----GKL  207 (261)
T ss_pred             c-CcEEEEEcccccccC----CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch-----HHH
Confidence            1 135766 66554321    12234566799998876543       589999999998876532221100     000


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      .-.+... ....-+...+|+|+++..++.+. . ..|+.+.+.|
T Consensus       208 ~~~~~~~-~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdg  250 (261)
T PRK08690        208 LGHVAAH-NPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDG  250 (261)
T ss_pred             HHHHhhc-CCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcC
Confidence            0000000 00012678999999999999865 2 2466666654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.03  E-value=0.0074  Score=49.46  Aligned_cols=146  Identities=11%  Similarity=0.059  Sum_probs=83.7

Q ss_pred             eEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhc----hHHHHHHHHHhC
Q 025054            8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VED----QFKLIAAIKEVG   53 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~----~~~li~aa~~~g   53 (258)
                      ..+.+|++|.+++.++++       ..|++||+++..       .                +.+    .+.++...++. 
T Consensus        58 ~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-  136 (274)
T PRK08415         58 YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-  136 (274)
T ss_pred             eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-
Confidence            467899999998877654       579999999741       0                112    23333333322 


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                        .++|. |+.+.....    +....|..+|+.++.+.+.       .|+.+..|.||++...+.......... .....
T Consensus       137 --g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~-~~~~~  209 (274)
T PRK08415        137 --ASVLTLSYLGGVKYV----PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMI-LKWNE  209 (274)
T ss_pred             --CcEEEEecCCCccCC----CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHH-hhhhh
Confidence              36776 665433211    1234566799998776653       579999999998865432111000000 00000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      ...+.     .-+...+|+|.+++.++.+. . -.|+.+.+.|
T Consensus       210 ~~~pl-----~r~~~pedva~~v~fL~s~~~~~itG~~i~vdG  247 (274)
T PRK08415        210 INAPL-----KKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDA  247 (274)
T ss_pred             hhCch-----hccCCHHHHHHHHHHHhhhhhhcccccEEEEcC
Confidence            00010     12567899999999998864 2 2466677764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.02  E-value=0.018  Score=47.11  Aligned_cols=147  Identities=11%  Similarity=0.088  Sum_probs=83.6

Q ss_pred             eEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHh--CCc
Q 025054            8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEV--GNI   55 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~--g~v   55 (258)
                      ..+.+|++|.+++.++++       ..|++||+++..       .                +.....++.++...  . -
T Consensus        60 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~  138 (271)
T PRK06505         60 FVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-G  138 (271)
T ss_pred             eEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-C
Confidence            467899999988877654       579999998742       1                11222233333210  1 1


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .+....|..+|+.++.+.+.       .|+.+..|.||.+...+...+...     . ....
T Consensus       139 G~Iv~isS~~~~~~----~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~-----~-~~~~  208 (271)
T PRK06505        139 GSMLTLTYGGSTRV----MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDA-----R-AIFS  208 (271)
T ss_pred             ceEEEEcCCCcccc----CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcch-----H-HHHH
Confidence            36776 55433221    11234567799998876653       579999999998876542211000     0 0000


Q ss_pred             eccCCCce-eeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          128 FYGDGQPK-AIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~-~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      ... ...+ --+...+|+|++++.++.+.. . .|+.+.+-|
T Consensus       209 ~~~-~~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdg  249 (271)
T PRK06505        209 YQQ-RNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDS  249 (271)
T ss_pred             HHh-hcCCccccCCHHHHHHHHHHHhCccccccCceEEeecC
Confidence            000 0001 124678999999999988642 2 366666654

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.017  Score=47.62  Aligned_cols=145  Identities=12%  Similarity=0.080  Sum_probs=82.8

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC--
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN--   54 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~--   54 (258)
                      +.++.+|++|.+++.++++       +.|++||+++...                   +.+...++.++    ++.+.  
T Consensus        66 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~  145 (286)
T PRK07791         66 AVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAG  145 (286)
T ss_pred             eEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccC
Confidence            5678899999888776654       5799999987521                   22222333333    22210  


Q ss_pred             ---ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           55 ---IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        55 ---vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                         -.++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.|| +...+.....       . 
T Consensus       146 ~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~-------~-  212 (286)
T PRK07791        146 RAVDARIINTSSGAGLQGS----VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF-------A-  212 (286)
T ss_pred             CCCCcEEEEeCchhhCcCC----CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH-------H-
Confidence               136776 665432221    1234577799998876653       58999999998 3222211100       0 


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      ....-+.  ..+..+...+|+|++++.++.+. . ..|+.+.+.|
T Consensus       213 ~~~~~~~--~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdg  255 (286)
T PRK07791        213 EMMAKPE--EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEG  255 (286)
T ss_pred             HHHhcCc--ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcC
Confidence            0000001  11123567999999999998764 2 2466676654

>PRK06484 short chain dehydrogenase; Validated

Probab=96.98  E-value=0.013  Score=52.51  Aligned_cols=139  Identities=15%  Similarity=0.137  Sum_probs=79.2

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc--------c-------------hhchHHHHHHH----HHhCC
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT--------E-------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~--------~-------------~~~~~~li~aa----~~~g~   54 (258)
                      +..+.+|++|++++.++++       +.|++||+++..        .             +.....++.++    ++.+.
T Consensus        53 ~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  132 (520)
T PRK06484         53 HHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH  132 (520)
T ss_pred             eeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            5668999999998877764       479999998741        0             12223333333    33331


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.......    +....|..+|+.++.+.+.       .++.++.|+||.+...+...+......... ...
T Consensus       133 g~~iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~-~~~  207 (520)
T PRK06484        133 GAAIVNVASGAGLVAL----PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPS-AVR  207 (520)
T ss_pred             CCeEEEECCcccCCCC----CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhH-HHH
Confidence            126776 654433221    1245677799999877653       479999999998766543221100000000 000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDD  154 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~  154 (258)
                      ....    ...+...+|+|+++..++.+
T Consensus       208 ~~~~----~~~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        208 SRIP----LGRLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             hcCC----CCCCcCHHHHHHHHHHHhCc
Confidence            0000    01245788999998887764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.96  E-value=0.0092  Score=48.37  Aligned_cols=148  Identities=14%  Similarity=0.146  Sum_probs=83.6

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHH---hC
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKE---VG   53 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~---~g   53 (258)
                      +.++.+|++|.+++.++++       ..|++||+++...                       +.+...+++++..   .+
T Consensus        62 ~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~  141 (258)
T PRK07533         62 PIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG  141 (258)
T ss_pred             ceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC
Confidence            4568899999988877653       5799999987420                       1122223333321   12


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                        .++|. |+.+.....    +....|..+|+.++.+.+.       .++.+..|.||.+...+...+....  .. ...
T Consensus       142 --g~Ii~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~--~~-~~~  212 (258)
T PRK07533        142 --GSLLTMSYYGAEKVV----ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFD--AL-LED  212 (258)
T ss_pred             --CEEEEEeccccccCC----ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcH--HH-HHH
Confidence              25666 665443211    1234566799998776653       5799999999988765432211000  00 000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      .   .......-+...+|+|.+++.++.+. . -.|+.+.+-|
T Consensus       213 ~---~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdg  252 (258)
T PRK07533        213 A---AERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDG  252 (258)
T ss_pred             H---HhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCC
Confidence            0   00000012568899999999998764 2 3466666653

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.92  E-value=0.012  Score=47.93  Aligned_cols=149  Identities=11%  Similarity=0.050  Sum_probs=84.8

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHH--hC
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKE--VG   53 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~--~g   53 (258)
                      +..+.+|+.|++++.++++       ..|++||+++...                        +.+...+.+++..  ..
T Consensus        58 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  137 (262)
T PRK07984         58 DIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP  137 (262)
T ss_pred             ceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC
Confidence            5678899999998887764       4799999997321                        1111223333321  11


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       -.++|. |+.+....    .+....|..+|+.++.+.+.       .++.+..|.||.+...........     . ..
T Consensus       138 -~g~Iv~iss~~~~~~----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~-----~-~~  206 (262)
T PRK07984        138 -GSALLTLSYLGAERA----IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF-----R-KM  206 (262)
T ss_pred             -CcEEEEEecCCCCCC----CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCch-----H-HH
Confidence             135666 66554321    11234566799999877754       579999999998865422111000     0 00


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..-.........+...+|++.++..++.+..  ..|..+.+.|
T Consensus       207 ~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdg  249 (262)
T PRK07984        207 LAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG  249 (262)
T ss_pred             HHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECC
Confidence            0000000000125688999999999987642  2466777754

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.90  E-value=0.01  Score=48.11  Aligned_cols=148  Identities=10%  Similarity=0.085  Sum_probs=82.6

Q ss_pred             eEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHh-CCcc
Q 025054            8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEV-GNIK   56 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~-g~vk   56 (258)
                      .++.+|++|++++.++++       ..|++||.++..       .                +.....++.++... ..=.
T Consensus        61 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G  140 (260)
T PRK06603         61 FVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGG  140 (260)
T ss_pred             eEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Confidence            356899999998887764       479999988631       0                11122222322110 0013


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.+....    .+....|..+|+.++.+.+.       .++.+..|.||.+-..+...+...     ....-.+
T Consensus       141 ~Iv~isS~~~~~~----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~-----~~~~~~~  211 (260)
T PRK06603        141 SIVTLTYYGAEKV----IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDF-----STMLKSH  211 (260)
T ss_pred             eEEEEecCccccC----CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCc-----HHHHHHH
Confidence            6776 66544321    11234577799998876643       579999999998865432111000     0000000


Q ss_pred             ccCCCce-eeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          129 YGDGQPK-AIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~-~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      ..  ..+ .-+...+|+|++++.++.+.. . .|+.+.+-|
T Consensus       212 ~~--~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdg  250 (260)
T PRK06603        212 AA--TAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDC  250 (260)
T ss_pred             Hh--cCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCC
Confidence            00  001 125678999999999998642 2 356666654

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.013  Score=47.33  Aligned_cols=155  Identities=13%  Similarity=0.048  Sum_probs=87.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~vk~~v   59 (258)
                      .+.++.+|++|++++.++++   ++|.+||+++...                   +..    .+.++...++.+ -.++|
T Consensus        58 ~~~~~~~D~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv  136 (259)
T PRK06125         58 DVAVHALDLSSPEAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIV  136 (259)
T ss_pred             ceEEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEE
Confidence            46788999999998887665   5899999987421                   122    233333444444 35677


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-CCCCCCCCCCC-ce-Ee
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-AQPGATAPPRE-NI-LF  128 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-~~~~~~~~~~~-~~-~~  128 (258)
                      . |+.......    .....|..+|+.++.+.+.       .++.++.|.||.+........ ........... .. .+
T Consensus       137 ~iss~~~~~~~----~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  212 (259)
T PRK06125        137 NVIGAAGENPD----ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQEL  212 (259)
T ss_pred             EecCccccCCC----CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHH
Confidence            6 554332211    1223445689988776653       589999999999876542211 00000000000 00 00


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ... ....-+.+.+|+|+++..++.+..  -.|..+.+.|
T Consensus       213 ~~~-~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdg  251 (259)
T PRK06125        213 LAG-LPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDG  251 (259)
T ss_pred             hcc-CCcCCCcCHHHHHHHHHHHcCchhccccCceEEecC
Confidence            000 000125688999999999987542  2456666654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.83  E-value=0.016  Score=47.07  Aligned_cols=83  Identities=12%  Similarity=-0.129  Sum_probs=49.2

Q ss_pred             CCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHH
Q 025054           75 PAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATY  147 (258)
Q Consensus        75 ~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~  147 (258)
                      +..+|..+|+.++.+.+.       .|+.++.|+||++..+.. . .. . . .....-..+ .+   ..+...+|++.+
T Consensus       169 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~-~-~~-~-~-~~~~~~~~~-~~---~~~~~~~~va~~  239 (267)
T TIGR02685       169 GFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDA-M-PF-E-V-QEDYRRKVP-LG---QREASAEQIADV  239 (267)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccc-c-ch-h-H-HHHHHHhCC-CC---cCCCCHHHHHHH
Confidence            345677899999887754       589999999998753210 0 00 0 0 000000001 00   124688999999


Q ss_pred             HHHHhcCCC--CCCceEEEcC
Q 025054          148 TIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       148 ~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +..++..+.  ..|+.+.+.|
T Consensus       240 ~~~l~~~~~~~~~G~~~~v~g  260 (267)
T TIGR02685       240 VIFLVSPKAKYITGTCIKVDG  260 (267)
T ss_pred             HHHHhCcccCCcccceEEECC
Confidence            999987652  2466666654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.75  E-value=0.017  Score=47.23  Aligned_cols=149  Identities=11%  Similarity=0.064  Sum_probs=86.3

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHh--CC
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEV--GN   54 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~--g~   54 (258)
                      +..+.+|++|++++.++++       +.|++||.++..       .                +.....++.++...  + 
T Consensus        62 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-  140 (272)
T PRK08159         62 FVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-  140 (272)
T ss_pred             ceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-
Confidence            4568899999998887654       479999998742       0                22233444444321  1 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.+....    .+....|..+|+.++.+.+.       .++.+..|.||++.............. ......
T Consensus       141 ~g~Iv~iss~~~~~~----~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~-~~~~~~  215 (272)
T PRK08159        141 GGSILTLTYYGAEKV----MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYI-LKWNEY  215 (272)
T ss_pred             CceEEEEeccccccC----CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHH-HHHHHh
Confidence            135665 66544321    12234566799998877653       579999999998865432111000000 000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..+   -  .-+...+|+|+++..++.+..  ..|..+.+.|
T Consensus       216 ~~p---~--~r~~~peevA~~~~~L~s~~~~~itG~~i~vdg  252 (272)
T PRK08159        216 NAP---L--RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDS  252 (272)
T ss_pred             CCc---c--cccCCHHHHHHHHHHHhCccccCccceEEEECC
Confidence            011   0  125688999999999997642  2466777765

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.74  E-value=0.021  Score=46.37  Aligned_cols=148  Identities=11%  Similarity=0.053  Sum_probs=84.1

Q ss_pred             eEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHH--hCC
Q 025054            8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKE--VGN   54 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~--~g~   54 (258)
                      ..+.+|+.|++++.++++       +.|++||+++...                        +.....+++++..  .+ 
T Consensus        59 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-  137 (260)
T PRK06997         59 LVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-  137 (260)
T ss_pred             ceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-
Confidence            467899999998887764       5799999986420                        1111223333322  11 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.+....    .+....|..+|+.++.+.+.       .++.++.|.||++-......+....  .. ... 
T Consensus       138 ~g~Ii~iss~~~~~~----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~--~~-~~~-  209 (260)
T PRK06997        138 DASLLTLSYLGAERV----VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFG--KI-LDF-  209 (260)
T ss_pred             CceEEEEeccccccC----CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchh--hH-HHH-
Confidence            246776 66554322    12234577799999877653       5799999999987653221110000  00 000 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                       +...-... -+...+|+++++..++.++ . -.|+.+.+-|
T Consensus       210 -~~~~~p~~-r~~~pedva~~~~~l~s~~~~~itG~~i~vdg  249 (260)
T PRK06997        210 -VESNAPLR-RNVTIEEVGNVAAFLLSDLASGVTGEITHVDS  249 (260)
T ss_pred             -HHhcCccc-ccCCHHHHHHHHHHHhCccccCcceeEEEEcC
Confidence             00000001 2568899999999998864 2 2456666653

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.029  Score=44.27  Aligned_cols=126  Identities=10%  Similarity=-0.021  Sum_probs=77.7

Q ss_pred             CceeEEeccCCCHHHHHHhh---C--CCcEEEEccCccc---------------------hhchHHHHHHHHH---hCCc
Q 025054            5 INCLIAQGDLHDHESLVKAI---K--PVDVVISAVGRTE---------------------VEDQFKLIAAIKE---VGNI   55 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al---~--g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~---~g~v   55 (258)
                      .+++++.+|++|.+++.+++   .  +.|.|||+++...                     +....++++++..   .+ -
T Consensus        44 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~  122 (222)
T PRK06953         44 LGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-G  122 (222)
T ss_pred             ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-C
Confidence            45678999999998888753   3  4799999987531                     3345566666643   11 2


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      .+++. |+......... ..+...|..+|..++.+++.     .++.++.++||++......                  
T Consensus       123 g~iv~isS~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~------------------  183 (222)
T PRK06953        123 GVLAVLSSRMGSIGDAT-GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG------------------  183 (222)
T ss_pred             CeEEEEcCccccccccc-CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC------------------
Confidence            34555 44322221111 11123577899999988875     3577888888876554311                  


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                       +    ......+|.+..+..++...
T Consensus       184 -~----~~~~~~~~~~~~~~~~~~~~  204 (222)
T PRK06953        184 -A----QAALDPAQSVAGMRRVIAQA  204 (222)
T ss_pred             -C----CCCCCHHHHHHHHHHHHHhc
Confidence             0    11357788888888877653

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.035  Score=44.71  Aligned_cols=118  Identities=12%  Similarity=0.010  Sum_probs=71.5

Q ss_pred             eEEeccCCCHHHHHHhhCCCcEEEEccCccc----------------hhchHHHHHHHH----Hh----CCccEEEcCCC
Q 025054            8 LIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------------VEDQFKLIAAIK----EV----GNIKRFFPTEY   63 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------------~~~~~~li~aa~----~~----g~vk~~v~S~~   63 (258)
                      ..+.+|++|.+++.+.+.+.|++||+++...                +.+...+++++.    +.    | ...++.|+.
T Consensus        61 ~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g-~~iiv~ss~  139 (245)
T PRK12367         61 EWIKWECGKEESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIP-KEIWVNTSE  139 (245)
T ss_pred             eEEEeeCCCHHHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCC-eEEEEEecc
Confidence            5678899999999999999999999997521                333444555443    21    2 223344443


Q ss_pred             CCCCCCCCCCCCCccchhhHHHHHHHH---H-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCC
Q 025054           64 GSNVDAGHPIEPAKSGYARKAKIRRAI---E-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQ  133 (258)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~k~~~e~~l---~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  133 (258)
                      +....     +....|..+|+.++...   +       ..++..+.+.||.+...+            .  .        
T Consensus       140 a~~~~-----~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~------------~--~--------  192 (245)
T PRK12367        140 AEIQP-----ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL------------N--P--------  192 (245)
T ss_pred             cccCC-----CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc------------C--c--------
Confidence            32211     11235777999874322   1       246777777776542211            0  0        


Q ss_pred             ceeeeeccchHHHHHHHHhcCC
Q 025054          134 PKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       134 ~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                        ...++.+|+|+.+..++...
T Consensus       193 --~~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        193 --IGIMSADFVAKQILDQANLG  212 (245)
T ss_pred             --cCCCCHHHHHHHHHHHHhcC
Confidence              01467899999999988765

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.70  E-value=0.022  Score=46.79  Aligned_cols=102  Identities=10%  Similarity=0.007  Sum_probs=72.4

Q ss_pred             cCceeEEeccCCCHHHHHHhhC---------CCcEEEEccCccc------------------------hhchHHHHHHHH
Q 025054            4 MINCLIAQGDLHDHESLVKAIK---------PVDVVISAVGRTE------------------------VEDQFKLIAAIK   50 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~---------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~   50 (258)
                      +.+.+.+.-|++++++++++.+         |--.|||.+|...                        +..+++++--.+
T Consensus        75 s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr  154 (322)
T KOG1610|consen   75 SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR  154 (322)
T ss_pred             CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence            4557788999999999999876         4567899997321                        455667777777


Q ss_pred             HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHH-------HhCCCCeEEEecCcccccCcC
Q 025054           51 EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAI-------EAEGIPHTYVSCNCSFGFFLP  111 (258)
Q Consensus        51 ~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l-------~~~~~~~t~lr~~~~~~~~~~  111 (258)
                      ++.  -|+|. ||.+.....    +...+|..+|+.+|.+.       +.-|+++.+|-||.|-.+...
T Consensus       155 ~ar--GRvVnvsS~~GR~~~----p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  155 RAR--GRVVNVSSVLGRVAL----PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hcc--CeEEEecccccCccC----cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            665  48887 655443221    23567888999998654       336999999999966665543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.59  E-value=0.027  Score=45.53  Aligned_cols=155  Identities=12%  Similarity=0.052  Sum_probs=86.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------h---------------hchHHHHHHHH-Hh
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------V---------------EDQFKLIAAIK-EV   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------~---------------~~~~~li~aa~-~~   52 (258)
                      ++.++.+|++|.+++.++++       +.|++||+++...          .               ...+.++.... +.
T Consensus        49 ~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~  128 (259)
T PRK08340         49 EVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK  128 (259)
T ss_pred             CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC
Confidence            46788999999998887764       6899999987421          0               01122333333 23


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCC-CCCCCC---CC
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPT-MAQPGA---TA  120 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~-~~~~~~---~~  120 (258)
                      + -.++|. |+......    .++...|..+|+.++.+.+.       .|+.+..|.||++-..+... +.....   ..
T Consensus       129 ~-~g~iv~isS~~~~~~----~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~  203 (259)
T PRK08340        129 M-KGVLVYLSSVSVKEP----MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVS  203 (259)
T ss_pred             C-CCEEEEEeCcccCCC----CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCc
Confidence            3 457887 65543221    12234566699998877764       47899999999876654311 000000   00


Q ss_pred             CCCC-ceEeccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054          121 PPRE-NILFYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP  166 (258)
Q Consensus       121 ~~~~-~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g  166 (258)
                      .... .-.+...-.. .-+...+|+|++++.++.++ .. .|..+.+.|
T Consensus       204 ~~~~~~~~~~~~~p~-~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdg  251 (259)
T PRK08340        204 FEETWEREVLERTPL-KRTGRWEELGSLIAFLLSENAEYMLGSTIVFDG  251 (259)
T ss_pred             hHHHHHHHHhccCCc-cCCCCHHHHHHHHHHHcCcccccccCceEeecC
Confidence            0000 0000000000 12567899999999998865 22 355666654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.54  E-value=0.025  Score=45.80  Aligned_cols=148  Identities=11%  Similarity=0.012  Sum_probs=82.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHh--C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEV--G   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~--g   53 (258)
                      .+..+.+|+.|++++.++++       +.|++||.++..       .                +.....+..++...  .
T Consensus        58 ~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~  137 (256)
T PRK07889         58 PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE  137 (256)
T ss_pred             CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc
Confidence            36688999999988877653       589999998742       1                11112222332210  1


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       -.++|. |+.+.. .    .+....|..+|+.++.+.+.       .|+.++.|.||.+...+...+.  .   ... .
T Consensus       138 -~g~Iv~is~~~~~-~----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~--~---~~~-~  205 (256)
T PRK07889        138 -GGSIVGLDFDATV-A----WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIP--G---FEL-L  205 (256)
T ss_pred             -CceEEEEeecccc-c----CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhccc--C---cHH-H
Confidence             135665 433211 0    11223456799998876653       5799999999988765432211  0   000 0


Q ss_pred             eEeccCCCcee--eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKA--IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~--~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...+.. ..+.  .+...+|+|+++..++.++.  -.|+.+.+-|
T Consensus       206 ~~~~~~-~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdg  249 (256)
T PRK07889        206 EEGWDE-RAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDG  249 (256)
T ss_pred             HHHHHh-cCccccccCCHHHHHHHHHHHhCcccccccceEEEEcC
Confidence            000000 1111  35789999999999998652  2456666653

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=96.49  E-value=0.0046  Score=47.36  Aligned_cols=94  Identities=20%  Similarity=0.241  Sum_probs=57.4

Q ss_pred             eeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEEc
Q 025054            7 CLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      +.++.+|++|++++.++++.       ++.|||+++...                   +.+..+|.++..... ++.||.
T Consensus        55 v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~  133 (181)
T PF08659_consen   55 VEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFIL  133 (181)
T ss_dssp             EEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEE
T ss_pred             eeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEE
Confidence            67789999999999998863       478999997532                   456678888877777 999887


Q ss_pred             -CCCCCCCCCCCCCCCCccchhhHHHHHHHH---HhCCCCeEEEecCcc
Q 025054           61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAI---EAEGIPHTYVSCNCS  105 (258)
Q Consensus        61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l---~~~~~~~t~lr~~~~  105 (258)
                       ||...-...    +....|.......+.+.   ++.+.+++.|.-|.+
T Consensus       134 ~SSis~~~G~----~gq~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  134 FSSISSLLGG----PGQSAYAAANAFLDALARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             EEEHHHHTT-----TTBHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred             ECChhHhccC----cchHhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence             664321111    12345555555555544   347899998886543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.43  E-value=0.092  Score=45.56  Aligned_cols=120  Identities=11%  Similarity=0.029  Sum_probs=70.3

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------------hhchHHHHHHH----HHhCC--cc-EEEcCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------------VEDQFKLIAAI----KEVGN--IK-RFFPTE   62 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------------~~~~~~li~aa----~~~g~--vk-~~v~S~   62 (258)
                      ++..+.+|++|.+++.+.+.++|++||+++...                +.+..++++++    ++.+.  .+ .+|.++
T Consensus       225 ~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~S  304 (406)
T PRK07424        225 PVKTLHWQVGQEAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTS  304 (406)
T ss_pred             CeEEEEeeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEc
Confidence            356788999999999999999999999887421                33444555554    33321  12 244432


Q ss_pred             CCCCCCCCCCCCCCc-cchhhHHHHHHHH--Hh--CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceee
Q 025054           63 YGSNVDAGHPIEPAK-SGYARKAKIRRAI--EA--EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAI  137 (258)
Q Consensus        63 ~~~~~~~~~~~~~~~-~~~~~k~~~e~~l--~~--~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  137 (258)
                      .+. ..     ++.. .|..+|+.++.+.  +.  .+.....+.+|.+...+                        .+..
T Consensus       305 sa~-~~-----~~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~------------------------~~~~  354 (406)
T PRK07424        305 EAE-VN-----PAFSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNL------------------------NPIG  354 (406)
T ss_pred             ccc-cc-----CCCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC------------------------CcCC
Confidence            221 11     1223 4667999998743  22  34444444444321110                        0112


Q ss_pred             eeccchHHHHHHHHhcCC
Q 025054          138 FNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       138 ~v~~~D~a~~~~~~l~~~  155 (258)
                      .++.+|+|+.++.+++.+
T Consensus       355 ~~spe~vA~~il~~i~~~  372 (406)
T PRK07424        355 VMSADWVAKQILKLAKRD  372 (406)
T ss_pred             CCCHHHHHHHHHHHHHCC
Confidence            468899999999988765

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.041  Score=43.55  Aligned_cols=132  Identities=15%  Similarity=0.090  Sum_probs=81.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC----CCcEEEEccCcc-------------c-----------hhchHHHHHHHHH--hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK----PVDVVISAVGRT-------------E-----------VEDQFKLIAAIKE--VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~----g~d~Vi~~~~~~-------------~-----------~~~~~~li~aa~~--~g~v   55 (258)
                      +++++.+|++|.+++.++++    +.|++||+++..             .           +.....+++++..  .. -
T Consensus        45 ~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~  123 (223)
T PRK05884         45 DVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS-G  123 (223)
T ss_pred             cCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-C
Confidence            56788999999999888775    589999987520             0           1112233333322  11 1


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+...        +....|..+|+.++.+.+.       .++.+..|.||++.......        ..  .  
T Consensus       124 g~Iv~isS~~~--------~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~--------~~--~--  183 (223)
T PRK05884        124 GSIISVVPENP--------PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG--------LS--R--  183 (223)
T ss_pred             CeEEEEecCCC--------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh--------cc--C--
Confidence            36776 55431        1234677799999877653       57999999999875432100        00  0  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                              .+.-..+|+++.+..++..+ . -.|+.+.+.|
T Consensus       184 --------~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdg  216 (223)
T PRK05884        184 --------TPPPVAAEIARLALFLTTPAARHITGQTLHVSH  216 (223)
T ss_pred             --------CCCCCHHHHHHHHHHHcCchhhccCCcEEEeCC
Confidence                    01127799999999988764 2 2456666654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=96.26  E-value=0.028  Score=45.43  Aligned_cols=142  Identities=11%  Similarity=-0.003  Sum_probs=79.0

Q ss_pred             ceeEEeccCCCHHHHHHhhCC-----------CcEEEEccCccc--------------------------hhchHHHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIKP-----------VDVVISAVGRTE--------------------------VEDQFKLIAA   48 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g-----------~d~Vi~~~~~~~--------------------------~~~~~~li~a   48 (258)
                      .+.++.+|++|.+++.++++.           .|+|||+++...                          +...+.++.+
T Consensus        56 ~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~  135 (256)
T TIGR01500        56 RVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKA  135 (256)
T ss_pred             eEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            477889999999988776642           158899886310                          1112334444


Q ss_pred             HHHh-CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCC
Q 025054           49 IKEV-GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGAT  119 (258)
Q Consensus        49 a~~~-g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~  119 (258)
                      .++. +.-.++|. |+......    .+....|..+|+.++.+.+.       .++.+..+.||++-..+........ .
T Consensus       136 l~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~-~  210 (256)
T TIGR01500       136 FKDSPGLNRTVVNISSLCAIQP----FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREES-V  210 (256)
T ss_pred             HhhcCCCCCEEEEECCHHhCCC----CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhc-C
Confidence            4433 21246776 66543221    11234566799999877653       4789999999988665432110000 0


Q ss_pred             CCCCCceEeccCCCceeeeeccchHHHHHHHHhcC
Q 025054          120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDD  154 (258)
Q Consensus       120 ~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~  154 (258)
                      ...  ...........-.+...+|+|..++.++..
T Consensus       211 ~~~--~~~~~~~~~~~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       211 DPD--MRKGLQELKAKGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             Chh--HHHHHHHHHhcCCCCCHHHHHHHHHHHHhc
Confidence            000  000000000001267899999999999864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.18  E-value=0.069  Score=43.65  Aligned_cols=133  Identities=20%  Similarity=0.150  Sum_probs=79.4

Q ss_pred             ceeEEeccCCCHHHHHHhh-------CCCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAI-------KPVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+.++++|++|.+++.+++       .++|++||.++...                       +-.++.++.-.++.+ =
T Consensus        64 ~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~  142 (282)
T KOG1205|consen   64 KVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-D  142 (282)
T ss_pred             ccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-C
Confidence            4788999999999998665       48999999998642                       334556666666664 3


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---h----CCCCeE-EEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---A----EGIPHT-YVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~----~~~~~t-~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -|+|. ||.......    +...-|.++|++++.+..   +    .+.... ++.||++-..+...-.. +   ... . 
T Consensus       143 GhIVvisSiaG~~~~----P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~~~-~---~~~-~-  212 (282)
T KOG1205|consen  143 GHIVVISSIAGKMPL----PFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKELL-G---EEG-K-  212 (282)
T ss_pred             CeEEEEeccccccCC----CcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccchhhc-c---ccc-c-
Confidence            47776 655433221    122357779999986653   2    222122 47888777665443111 0   000 0 


Q ss_pred             EeccCCCceeeeeccchHHH--HHHHHhcCC
Q 025054          127 LFYGDGQPKAIFNKEEDIAT--YTIKAVDDP  155 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~--~~~~~l~~~  155 (258)
                            ....+.....|++.  .++.++..+
T Consensus       213 ------~~~~~~~~~~~~~~~~~~~~~i~~~  237 (282)
T KOG1205|consen  213 ------SQQGPFLRTEDVADPEAVAYAISTP  237 (282)
T ss_pred             ------ccccchhhhhhhhhHHHHHHHHhcC
Confidence                  22334445556644  677776665

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.044  Score=45.82  Aligned_cols=103  Identities=13%  Similarity=0.078  Sum_probs=62.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhc----hHHHHHHHHHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VED----QFKLIAAIKEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~----~~~li~aa~~~g~vk   56 (258)
                      .+.++.+|+.|.+++.++++       +.|++||.++...                  ..+    .+.++...++.  -.
T Consensus        66 ~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~  143 (313)
T PRK05854         66 KLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RA  143 (313)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CC
Confidence            47889999999998887654       4799999987421                  112    22333333333  24


Q ss_pred             EEEc-CCCCCCCCC--------CCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCc
Q 025054           57 RFFP-TEYGSNVDA--------GHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFL  110 (258)
Q Consensus        57 ~~v~-S~~~~~~~~--------~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~  110 (258)
                      ++|. |+.......        .....+...|..+|...+.+.++         .++.+..+.||.+...+.
T Consensus       144 riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~  215 (313)
T PRK05854        144 RVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL  215 (313)
T ss_pred             CeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence            6665 554321110        01122334566799988765532         368999999998876654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.08  E-value=0.023  Score=49.02  Aligned_cols=52  Identities=27%  Similarity=0.275  Sum_probs=42.2

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      ..+++.++.|.+|.++|.+.++++|+||+++++.   ....++++|.++| + ++|-
T Consensus        45 ~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~---~~~~v~~~~i~~g-~-~yvD   96 (386)
T PF03435_consen   45 GDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF---FGEPVARACIEAG-V-HYVD   96 (386)
T ss_dssp             TTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG---GHHHHHHHHHHHT---EEEE
T ss_pred             ccceeEEEEecCCHHHHHHHHhcCCEEEECCccc---hhHHHHHHHHHhC-C-Ceec
Confidence            3578999999999999999999999999999876   5778999999999 4 6665

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.15  Score=40.50  Aligned_cols=95  Identities=8%  Similarity=-0.085  Sum_probs=59.1

Q ss_pred             eeEEeccCCCHHHHHHhhC--------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054            7 CLIAQGDLHDHESLVKAIK--------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN   54 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~   54 (258)
                      +..+..|+.|++++.++++        +.|++||+++...                        +...+.++...++.++
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~  135 (227)
T PRK08862         56 VYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK  135 (227)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            5567789999998876653        5799999986310                        0111222333333321


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCccccc
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGF  108 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~  108 (258)
                      -..+|. |+.....       ....|..+|+.++.+.+.       .++.+..|.||++..+
T Consensus       136 ~g~Iv~isS~~~~~-------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        136 KGVIVNVISHDDHQ-------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             CceEEEEecCCCCC-------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            236666 6543221       234577799998877653       5799999999987665

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=95.72  E-value=0.11  Score=40.74  Aligned_cols=104  Identities=11%  Similarity=0.054  Sum_probs=61.4

Q ss_pred             ccCceeEEeccCCCHHHHHHhhC---------CCcEEEEccCccc------------------------hhchHHHHHHH
Q 025054            3 YMINCLIAQGDLHDHESLVKAIK---------PVDVVISAVGRTE------------------------VEDQFKLIAAI   49 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~al~---------g~d~Vi~~~~~~~------------------------~~~~~~li~aa   49 (258)
                      .++++.+++.|++..+++.++.+         |.+.+++.++...                        +-..+.++-..
T Consensus        52 ~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLL  131 (249)
T KOG1611|consen   52 SDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLL  131 (249)
T ss_pred             cCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence            36789999999998888888765         5678888887531                        22233333333


Q ss_pred             HHhC--------Ccc--EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc
Q 025054           50 KEVG--------NIK--RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG  107 (258)
Q Consensus        50 ~~~g--------~vk--~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~  107 (258)
                      +++.        ++.  .+|. |+.+...+... ..+...|..+|.++-...++       .++-++.|+|||+-.
T Consensus       132 kkaas~~~gd~~s~~raaIinisS~~~s~~~~~-~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~T  206 (249)
T KOG1611|consen  132 KKAASKVSGDGLSVSRAAIINISSSAGSIGGFR-PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQT  206 (249)
T ss_pred             HHHhhcccCCcccccceeEEEeeccccccCCCC-CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEc
Confidence            3322        022  3554 44433322211 12334555699998877765       345667777776654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.72  E-value=0.15  Score=41.20  Aligned_cols=155  Identities=9%  Similarity=-0.018  Sum_probs=84.5

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhC--
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVG--   53 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g--   53 (258)
                      +..+.+|+.|.+++.++++       +.|++||+++...                        +.....+++++...-  
T Consensus        53 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  132 (262)
T TIGR03325        53 VVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVA  132 (262)
T ss_pred             eEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhh
Confidence            6778999999888777664       5799999986310                        222345555554321  


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      +-.++|. |+.......    +....|..+|+.++.+.+.      ..+.+..|.||++...+..... ...........
T Consensus       133 ~~g~iv~~sS~~~~~~~----~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~-~~~~~~~~~~~  207 (262)
T TIGR03325       133 SRGSVIFTISNAGFYPN----GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKS-LGMADKSISTV  207 (262)
T ss_pred             cCCCEEEEeccceecCC----CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccc-ccccccccccc
Confidence            0134555 443322211    1234567799999987754      2388999999988765432110 00000000000


Q ss_pred             Eecc--CCCce-eeeeccchHHHHHHHHhcCC--CC-CCceEEEcC
Q 025054          127 LFYG--DGQPK-AIFNKEEDIATYTIKAVDDP--RT-LNKTLYLRP  166 (258)
Q Consensus       127 ~~~g--~g~~~-~~~v~~~D~a~~~~~~l~~~--~~-~~~~~~l~g  166 (258)
                      ..-.  ....+ .-+...+|+|.++..++.++  .. .|..+.+.|
T Consensus       208 ~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdg  253 (262)
T TIGR03325       208 PLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDG  253 (262)
T ss_pred             chhhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecC
Confidence            0000  00000 12567899999998888763  22 456666654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PTZ00325 malate dehydrogenase; Provisional

Probab=95.62  E-value=0.016  Score=48.56  Aligned_cols=98  Identities=18%  Similarity=0.120  Sum_probs=61.0

Q ss_pred             EeccCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC--------
Q 025054           10 AQGDLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV--------   67 (258)
Q Consensus        10 ~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~--------   67 (258)
                      ...+.+|+.++.++++|+|+|+++++...             +...+++++++++++ ++++|. ++.+.+.        
T Consensus        60 ~v~~~td~~~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~  138 (321)
T PTZ00325         60 KVTGYADGELWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAET  138 (321)
T ss_pred             eEEEecCCCchHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhh
Confidence            34455565556789999999999998642             457889999999999 999997 6654421        


Q ss_pred             -CCCCCCCCCccchh---hHHHHHHHHHh-CCCCeEEEecCcccccC
Q 025054           68 -DAGHPIEPAKSGYA---RKAKIRRAIEA-EGIPHTYVSCNCSFGFF  109 (258)
Q Consensus        68 -~~~~~~~~~~~~~~---~k~~~e~~l~~-~~~~~t~lr~~~~~~~~  109 (258)
                       ....+.++..-+.-   .-...+..+.+ .++...-++ ++++|.-
T Consensus       139 ~~~~sg~p~~~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeH  184 (321)
T PTZ00325        139 LKKAGVYDPRKLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGH  184 (321)
T ss_pred             hhhccCCChhheeechhHHHHHHHHHHHHHhCcChhheE-EEEEeec
Confidence             11222333322221   12233334433 577777777 6677643

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.61  E-value=0.15  Score=42.77  Aligned_cols=126  Identities=15%  Similarity=0.038  Sum_probs=74.8

Q ss_pred             eeEEeccCCC--HH---HHHHhhCC--CcEEEEccCcc-----c----------------h----hchHHHHHHHHHhCC
Q 025054            7 CLIAQGDLHD--HE---SLVKAIKP--VDVVISAVGRT-----E----------------V----EDQFKLIAAIKEVGN   54 (258)
Q Consensus         7 v~~~~~D~~d--~~---~l~~al~g--~d~Vi~~~~~~-----~----------------~----~~~~~li~aa~~~g~   54 (258)
                      +..+.+|+++  .+   .+.+.+.+  +|++||.++..     .                +    ...+.++...++.+ 
T Consensus       106 ~~~~~~Dl~~~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-  184 (320)
T PLN02780        106 IKTVVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-  184 (320)
T ss_pred             EEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-
Confidence            5667788874  23   34445554  45899998642     0                1    22233444445556 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+........  .+....|..+|+.++.+.+.       .|+.++.++||.+-.++...         ..   
T Consensus       185 ~g~IV~iSS~a~~~~~~--~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~---------~~---  250 (320)
T PLN02780        185 KGAIINIGSGAAIVIPS--DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI---------RR---  250 (320)
T ss_pred             CcEEEEEechhhccCCC--CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc---------cC---
Confidence            678887 6654321110  11235677799999876643       58999999999886654221         00   


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDD  154 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~  154 (258)
                             ......+.+++|+.+...+..
T Consensus       251 -------~~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        251 -------SSFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             -------CCCCCCCHHHHHHHHHHHhCC
Confidence                   001134788999999998853

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=95.51  E-value=0.029  Score=47.42  Aligned_cols=80  Identities=14%  Similarity=0.184  Sum_probs=58.3

Q ss_pred             CCcEEEEccCccc--------------hhchHHHHHHHH----HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHH
Q 025054           26 PVDVVISAVGRTE--------------VEDQFKLIAAIK----EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKI   86 (258)
Q Consensus        26 g~d~Vi~~~~~~~--------------~~~~~~li~aa~----~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~   86 (258)
                      ++..+|++.|...              .+....++.+..    +.+ .|++|. ++++...-.     ...+|+..|.+.
T Consensus       203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~-~K~~vIvTSfn~~~~s-----~~f~Yfk~K~~L  276 (410)
T PF08732_consen  203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTG-NKKLVIVTSFNNNAIS-----SMFPYFKTKGEL  276 (410)
T ss_pred             hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCC-CceEEEEEecCcchhh-----hhhhhhHHHHHH
Confidence            4577888877542              344556777766    667 899988 888876422     246899999999


Q ss_pred             HHHHHhC---CC-CeEEEecCcccccCcC
Q 025054           87 RRAIEAE---GI-PHTYVSCNCSFGFFLP  111 (258)
Q Consensus        87 e~~l~~~---~~-~~t~lr~~~~~~~~~~  111 (258)
                      |+-|...   .+ ..+|+|||...|.-.+
T Consensus       277 E~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  277 ENDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             HHHHHhhcccccceEEEecCccccCCCCC
Confidence            9999873   24 5899999999986544

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PLN00015 protochlorophyllide reductase

Probab=95.32  E-value=0.19  Score=41.94  Aligned_cols=144  Identities=16%  Similarity=0.117  Sum_probs=77.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~   54 (258)
                      .+.++..|+.|.+++.++++       +.|++||.++...                        +...+.++...++.+.
T Consensus        48 ~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~  127 (308)
T PLN00015         48 SYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY  127 (308)
T ss_pred             eEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence            46778999999998877654       5799999997420                        1223444555554431


Q ss_pred             -ccEEEc-CCCCCCCCC-----C--------------------------CCCCCCccchhhHHHHHHHH----Hh----C
Q 025054           55 -IKRFFP-TEYGSNVDA-----G--------------------------HPIEPAKSGYARKAKIRRAI----EA----E   93 (258)
Q Consensus        55 -vk~~v~-S~~~~~~~~-----~--------------------------~~~~~~~~~~~~k~~~e~~l----~~----~   93 (258)
                       ..++|. |+.......     .                          ....+...|..+|+......    ++    .
T Consensus       128 ~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~  207 (308)
T PLN00015        128 PSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEET  207 (308)
T ss_pred             CCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccC
Confidence             257887 654332100     0                          00112234666999744332    22    4


Q ss_pred             CCCeEEEecCcccc-cCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054           94 GIPHTYVSCNCSFG-FFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus        94 ~~~~t~lr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      |+.++.++||++.. ++...... .    .......... .....+.+.++.|+.++.++.++
T Consensus       208 gi~v~~v~PG~v~~t~~~~~~~~-~----~~~~~~~~~~-~~~~~~~~pe~~a~~~~~l~~~~  264 (308)
T PLN00015        208 GITFASLYPGCIATTGLFREHIP-L----FRLLFPPFQK-YITKGYVSEEEAGKRLAQVVSDP  264 (308)
T ss_pred             CeEEEEecCCcccCccccccccH-H----HHHHHHHHHH-HHhcccccHHHhhhhhhhhcccc
Confidence            79999999998853 33221100 0    0000000000 00012467899999999887764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=95.26  E-value=0.045  Score=46.82  Aligned_cols=50  Identities=26%  Similarity=0.329  Sum_probs=44.0

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      +++.++.|..|.+++.+++++.|+||+++++.   ...++++||.++| | +++-
T Consensus        48 ~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~---~~~~i~ka~i~~g-v-~yvD   97 (389)
T COG1748          48 KVEALQVDAADVDALVALIKDFDLVINAAPPF---VDLTILKACIKTG-V-DYVD   97 (389)
T ss_pred             cceeEEecccChHHHHHHHhcCCEEEEeCCch---hhHHHHHHHHHhC-C-CEEE
Confidence            68999999999999999999999999999886   4668999999999 4 4554

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.25  E-value=0.28  Score=41.02  Aligned_cols=144  Identities=16%  Similarity=0.117  Sum_probs=77.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhC-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVG-   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g-   53 (258)
                      .+.++.+|++|.+++.++++       +.|++||.++...                        +...+.++...++.+ 
T Consensus        54 ~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~  133 (314)
T TIGR01289        54 SYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN  133 (314)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC
Confidence            46778999999988776653       5899999987410                        122344455555442 


Q ss_pred             CccEEEc-CCCCCCCCC-----------------------------CCCCCCCccchhhHHHHHHHHH----h----CCC
Q 025054           54 NIKRFFP-TEYGSNVDA-----------------------------GHPIEPAKSGYARKAKIRRAIE----A----EGI   95 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~-----------------------------~~~~~~~~~~~~~k~~~e~~l~----~----~~~   95 (258)
                      +-.++|. |+.......                             ..+..+...|..+|+....+.+    +    .++
T Consensus       134 ~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi  213 (314)
T TIGR01289       134 KDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGI  213 (314)
T ss_pred             CCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCe
Confidence            1257887 654321100                             0011122346679998544332    1    378


Q ss_pred             CeEEEecCccc-ccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054           96 PHTYVSCNCSF-GFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus        96 ~~t~lr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      .++.|+||++. ..+...... .   .. ..+..... .....+.+.++.|+.++.++.++
T Consensus       214 ~v~~v~PG~v~~T~l~~~~~~-~---~~-~~~~~~~~-~~~~~~~~~~~~a~~l~~~~~~~  268 (314)
T TIGR01289       214 TFASLYPGCIADTGLFREHVP-L---FR-TLFPPFQK-YITKGYVSEEEAGERLAQVVSDP  268 (314)
T ss_pred             EEEEecCCcccCCcccccccH-H---HH-HHHHHHHH-HHhccccchhhhhhhhHHhhcCc
Confidence            89999999885 333211000 0   00 00000000 00012568899999999988765

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=95.09  E-value=0.084  Score=42.19  Aligned_cols=149  Identities=13%  Similarity=0.075  Sum_probs=86.7

Q ss_pred             CceeEEeccCCCHHHHHHhh--------CCCcEEEEccCccc---------------------------hhchHHHHHHH
Q 025054            5 INCLIAQGDLHDHESLVKAI--------KPVDVVISAVGRTE---------------------------VEDQFKLIAAI   49 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al--------~g~d~Vi~~~~~~~---------------------------~~~~~~li~aa   49 (258)
                      .+.+++.+|+.|++++.+++        .+.|+++|+++...                           +...+.++...
T Consensus        44 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (241)
T PF13561_consen   44 YGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLM  123 (241)
T ss_dssp             TTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678999999998888764        45799998875321                           12223333333


Q ss_pred             HHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054           50 KEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATA  120 (258)
Q Consensus        50 ~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~  120 (258)
                      ++.|   .+|. |+.+.....    +....|..+|+.++.+.+.        .|+.+..|.||++.............. 
T Consensus       124 ~~~g---sii~iss~~~~~~~----~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~-  195 (241)
T PF13561_consen  124 KKGG---SIINISSIAAQRPM----PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEF-  195 (241)
T ss_dssp             HHEE---EEEEEEEGGGTSBS----TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHH-
T ss_pred             hhCC---CcccccchhhcccC----ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccch-
Confidence            3333   5665 554432221    1234555689999877753        589999999999887543221100000 


Q ss_pred             CCCCceEeccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054          121 PPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP  166 (258)
Q Consensus       121 ~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g  166 (258)
                      .....-..|   -.  .+...+|+|.++..++++. .. .|+.+.+-|
T Consensus       196 ~~~~~~~~p---l~--r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG  238 (241)
T PF13561_consen  196 LEELKKRIP---LG--RLGTPEEVANAVLFLASDAASYITGQVIPVDG  238 (241)
T ss_dssp             HHHHHHHST---TS--SHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred             hhhhhhhhc---cC--CCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence            000000011   11  1458999999999999875 23 366666654

...

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=94.65  E-value=0.23  Score=52.62  Aligned_cols=97  Identities=13%  Similarity=0.084  Sum_probs=69.0

Q ss_pred             eeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEEc-
Q 025054            7 CLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFFP-   60 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v~-   60 (258)
                      +.++.+|++|.+++.++++      +.|.|||.++...                   +.+..+++.++.... .+++|. 
T Consensus      2096 v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~-~~~IV~~ 2174 (2582)
T TIGR02813      2096 AEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAEN-IKLLALF 2174 (2582)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE
Confidence            6788999999998888775      4799999998521                   566788888888776 788886 


Q ss_pred             CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCccccc
Q 025054           61 TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGF  108 (258)
Q Consensus        61 S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~  108 (258)
                      ||.......    .....|..+|..+..+.+.     .++.++.|.+|.+-+.
T Consensus      2175 SSvag~~G~----~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2175 SSAAGFYGN----TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             echhhcCCC----CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            665433221    1234566788877655432     3578889998877653

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=94.51  E-value=0.17  Score=37.64  Aligned_cols=83  Identities=22%  Similarity=0.253  Sum_probs=54.8

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEE
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRF   58 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~   58 (258)
                      .++.+++.|+.+.+++.++++       ..|++||+++...                   +.....+..++...+ -.++
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~i  130 (167)
T PF00106_consen   52 AKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKI  130 (167)
T ss_dssp             SEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccce
Confidence            357889999999988888765       5799999998542                   233445555555544 4667


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA   92 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~   92 (258)
                      |. |+.......    +....|..+|+.++.+.+.
T Consensus       131 v~~sS~~~~~~~----~~~~~Y~askaal~~~~~~  161 (167)
T PF00106_consen  131 VNISSIAGVRGS----PGMSAYSASKAALRGLTQS  161 (167)
T ss_dssp             EEEEEGGGTSSS----TTBHHHHHHHHHHHHHHHH
T ss_pred             EEecchhhccCC----CCChhHHHHHHHHHHHHHH
Confidence            76 665443321    1234555699999887754

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.35  E-value=1.1  Score=36.88  Aligned_cols=127  Identities=16%  Similarity=0.069  Sum_probs=80.5

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +....+|++|.+.+.+..+       .+|++++.|+...                       .--.++++-.+.+.. =-
T Consensus        88 ~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~G  166 (300)
T KOG1201|consen   88 AKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NG  166 (300)
T ss_pred             eeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-Cc
Confidence            7788999999887766543       6899999998532                       223456666666654 35


Q ss_pred             EEEc--CCCCCCCCCCCCCCCCccchhhHHHHHHH-------HHh---CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           57 RFFP--TEYGSNVDAGHPIEPAKSGYARKAKIRRA-------IEA---EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        57 ~~v~--S~~~~~~~~~~~~~~~~~~~~~k~~~e~~-------l~~---~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      |+|-  |..|-...     +...+|..+|+.+.-.       +++   .+++.|.+.|+.+-..++..          ..
T Consensus       167 HIV~IaS~aG~~g~-----~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~----------~~  231 (300)
T KOG1201|consen  167 HIVTIASVAGLFGP-----AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG----------AT  231 (300)
T ss_pred             eEEEehhhhcccCC-----ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC----------CC
Confidence            8886  44443221     2346788899887533       333   36889999886444222111          00


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      +      -..-.|.+..+-+|+.++.++...
T Consensus       232 ~------~~~l~P~L~p~~va~~Iv~ai~~n  256 (300)
T KOG1201|consen  232 P------FPTLAPLLEPEYVAKRIVEAILTN  256 (300)
T ss_pred             C------CccccCCCCHHHHHHHHHHHHHcC
Confidence            1      112356788999999999987654

>PRK08309 short chain dehydrogenase; Provisional

Probab=94.06  E-value=0.15  Score=38.81  Aligned_cols=51  Identities=25%  Similarity=0.337  Sum_probs=41.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccchhchHHHHHHHHHhCCcc----EEEc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTEVEDQFKLIAAIKEVGNIK----RFFP   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk----~~v~   60 (258)
                      .+..+.+|+.|.+++.++++       +.|.+|+.+...   ..+++..+|++.| |+    +|++
T Consensus        48 ~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~~---~~~~~~~~~~~~g-v~~~~~~~~h  109 (177)
T PRK08309         48 SITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHSS---AKDALSVVCRELD-GSSETYRLFH  109 (177)
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEecccc---chhhHHHHHHHHc-cCCCCceEEE
Confidence            46778899999999888776       357777776654   6889999999999 99    9997

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=93.96  E-value=0.11  Score=43.60  Aligned_cols=44  Identities=25%  Similarity=0.251  Sum_probs=38.4

Q ss_pred             EEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054            9 IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVG   53 (258)
Q Consensus         9 ~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g   53 (258)
                      ++.+|.+|+++|.+-.+.+.+|+||+++.. -...+++.||.++|
T Consensus        66 i~i~D~~n~~Sl~emak~~~vivN~vGPyR-~hGE~VVkacienG  109 (423)
T KOG2733|consen   66 ILIADSANEASLDEMAKQARVIVNCVGPYR-FHGEPVVKACIENG  109 (423)
T ss_pred             EEEecCCCHHHHHHHHhhhEEEEeccccce-ecCcHHHHHHHHcC
Confidence            888999999999999999999999999853 34567888888888

>PRK08303 short chain dehydrogenase; Provisional

Probab=93.56  E-value=0.99  Score=37.59  Aligned_cols=143  Identities=10%  Similarity=-0.009  Sum_probs=77.5

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEcc-Cc-------cc----------------hhc----hHHHHHHHHH
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAV-GR-------TE----------------VED----QFKLIAAIKE   51 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~-~~-------~~----------------~~~----~~~li~aa~~   51 (258)
                      +..+.+|+.|++++.++++       +.|++||.+ +.       ..                +..    .+.++...++
T Consensus        69 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~  148 (305)
T PRK08303         69 GIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIR  148 (305)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Confidence            5678999999988877654       579999988 52       11                111    2233333333


Q ss_pred             hCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           52 VGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        52 ~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                      .+ -.++|. |+....... .+......|..+|+.+..+.+.       .|+.+..|.||++-..+..............
T Consensus       149 ~~-~g~IV~isS~~~~~~~-~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~  226 (305)
T PRK08303        149 RP-GGLVVEITDGTAEYNA-THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRD  226 (305)
T ss_pred             CC-CcEEEEECCccccccC-cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhh
Confidence            33 246776 553221111 0111133566799998877653       5799999999988654321100000000000


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      .....+   . ..-+...+|+|.+++.++.++
T Consensus       227 ~~~~~p---~-~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        227 ALAKEP---H-FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             hhcccc---c-cccCCCHHHHHHHHHHHHcCc
Confidence            000001   0 011347899999999998775

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.89  E-value=1.4  Score=36.54  Aligned_cols=136  Identities=16%  Similarity=0.129  Sum_probs=74.0

Q ss_pred             eeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHHH----HhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~vk   56 (258)
                      |.+..+|+.|-++...++++       .|.+|++++..-                   ..++.+++.++.    +..+.-
T Consensus        86 v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g  165 (331)
T KOG1210|consen   86 VSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLG  165 (331)
T ss_pred             eeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCc
Confidence            55778888887777666653       599999998642                   334455555443    322123


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHH-------HHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRA-------IEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~-------l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      +++. |+--+...    +.....|..+|..+.-+       +...++.+|...|+.+-.+++..-.. .   .......+
T Consensus       166 ~I~~vsS~~a~~~----i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~-t---kP~~t~ii  237 (331)
T KOG1210|consen  166 RIILVSSQLAMLG----IYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENK-T---KPEETKII  237 (331)
T ss_pred             EEEEehhhhhhcC----cccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccc-c---Cchheeee
Confidence            6665 43222211    12234555566665433       33368889998888777654432000 0   00001112


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDD  154 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~  154 (258)
                      -| ++   +.+..+++|.+++.=+..
T Consensus       238 ~g-~s---s~~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  238 EG-GS---SVIKCEEMAKAIVKGMKR  259 (331)
T ss_pred             cC-CC---CCcCHHHHHHHHHhHHhh
Confidence            22 22   347889999888875543

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.42  E-value=2  Score=36.04  Aligned_cols=107  Identities=16%  Similarity=0.050  Sum_probs=69.0

Q ss_pred             cCceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHHhCCc
Q 025054            4 MINCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~~g~v   55 (258)
                      ...+.+++.|++|.+++++..+       .-|+.|+.||...                     ...+..|++..+.+. .
T Consensus        85 ~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~  163 (314)
T KOG1208|consen   85 NQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-P  163 (314)
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-C
Confidence            3456779999999998887654       4699999988532                     345577888888876 5


Q ss_pred             cEEEc-CCCCC----CCCCCCC-----CCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcC
Q 025054           56 KRFFP-TEYGS----NVDAGHP-----IEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLP  111 (258)
Q Consensus        56 k~~v~-S~~~~----~~~~~~~-----~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~  111 (258)
                      .|+|. |+...    +......     ......|..+|.....+..+      .|+....+.||.+..+.+.
T Consensus       164 ~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~  235 (314)
T KOG1208|consen  164 SRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLS  235 (314)
T ss_pred             CCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccccee
Confidence            78887 65432    1111110     11111255577776444332      2799999999999987443

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=92.42  E-value=1.8  Score=34.96  Aligned_cols=90  Identities=19%  Similarity=0.191  Sum_probs=63.2

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccEEEc--CCCCCCCCCCCCCCCCccch
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP--TEYGSNVDAGHPIEPAKSGY   80 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~--S~~~~~~~~~~~~~~~~~~~   80 (258)
                      .+++++.|-+.|.+.+.+.++  +++.||.++++......+++.+||++.| +..+=+  ..+-....      ....+.
T Consensus        43 ~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~-ipylR~eRp~~~~~~~------~~~~~v  115 (249)
T PF02571_consen   43 PGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFAAEISQNAIEACRELG-IPYLRFERPSWQPEPD------DNWHYV  115 (249)
T ss_pred             CCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcC-cceEEEEcCCcccCCC------CeEEEe
Confidence            457888899989999999996  8999999999988889999999999999 876655  43322111      123344


Q ss_pred             hhHHHHHHHHHhCCCCeEEEe
Q 025054           81 ARKAKIRRAIEAEGIPHTYVS  101 (258)
Q Consensus        81 ~~k~~~e~~l~~~~~~~t~lr  101 (258)
                      .+-.++-+++.+.+-.-+++-
T Consensus       116 ~~~~eA~~~l~~~~~~~iflt  136 (249)
T PF02571_consen  116 DSYEEAAELLKELGGGRIFLT  136 (249)
T ss_pred             CCHHHHHHHHhhcCCCCEEEe
Confidence            555555566655443444444

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=92.18  E-value=0.31  Score=47.21  Aligned_cols=45  Identities=36%  Similarity=0.333  Sum_probs=34.3

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g   53 (258)
                      +++.+..|+.|.+++.++++++|+|+++++...   +..++.+|.++|
T Consensus       628 ~~~~v~lDv~D~e~L~~~v~~~DaVIsalP~~~---H~~VAkaAieaG  672 (1042)
T PLN02819        628 NAEAVQLDVSDSESLLKYVSQVDVVISLLPASC---HAVVAKACIELK  672 (1042)
T ss_pred             CCceEEeecCCHHHHHHhhcCCCEEEECCCchh---hHHHHHHHHHcC
Confidence            677899999999999999999999999998742   333444444444

>PLN00106 malate dehydrogenase

Probab=92.09  E-value=0.27  Score=41.28  Aligned_cols=53  Identities=19%  Similarity=0.150  Sum_probs=40.6

Q ss_pred             cCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054           13 DLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN   66 (258)
Q Consensus        13 D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~   66 (258)
                      ++.+.+++.++++|+|+||++++...             ....+++++++++++ ++.+|. ++-.++
T Consensus        73 ~~~~~~d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD  139 (323)
T PLN00106         73 GFLGDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVN  139 (323)
T ss_pred             EEeCCCCHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence            43344457889999999999998632             567789999999999 999887 554443

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=91.96  E-value=0.43  Score=38.69  Aligned_cols=55  Identities=20%  Similarity=0.200  Sum_probs=43.8

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      .|...+..+..|.+++.+.++  +.|+||+++++......+++.+||++.| +..+=+
T Consensus        42 ~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~is~~a~~a~~~~~-ipylR~   98 (256)
T TIGR00715        42 HQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQITTNATAVCKELG-IPYVRF   98 (256)
T ss_pred             cCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHHHHHHHHHHHHHhC-CcEEEE
Confidence            334445555667888988886  5899999999988889999999999999 876555

This enzyme was found to be a monomer by gel filtration.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=91.81  E-value=0.81  Score=36.15  Aligned_cols=150  Identities=12%  Similarity=0.110  Sum_probs=88.5

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------hhchHHHHHHHHH-hCCc-cEEEc
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------VEDQFKLIAAIKE-VGNI-KRFFP   60 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------~~~~~~li~aa~~-~g~v-k~~v~   60 (258)
                      ..+-+++.|+++..+++++|+       -.|++|+.++..+               +..+...++...+ .|.- --+|-
T Consensus        55 ~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvN  134 (261)
T KOG4169|consen   55 VSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVN  134 (261)
T ss_pred             ceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEE
Confidence            457788999999999999887       3599999998643               4556667777654 3212 33444


Q ss_pred             --CCCCCCCCCCCCCCCCcc-chhhHHHH---------HHHHHhCCCCeEEEecCcccccCcCCCCC-CCCCCCCCCceE
Q 025054           61 --TEYGSNVDAGHPIEPAKS-GYARKAKI---------RRAIEAEGIPHTYVSCNCSFGFFLPTMAQ-PGATAPPRENIL  127 (258)
Q Consensus        61 --S~~~~~~~~~~~~~~~~~-~~~~k~~~---------e~~l~~~~~~~t~lr~~~~~~~~~~~~~~-~~~~~~~~~~~~  127 (258)
                        |..|-++..      ..| |.++|+.+         ..+.+++|+.+..++||.........+.. ..+.....   .
T Consensus       135 msSv~GL~P~p------~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~---~  205 (261)
T KOG4169|consen  135 MSSVAGLDPMP------VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSD---S  205 (261)
T ss_pred             eccccccCccc------cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccH---H
Confidence              555655432      233 44477654         45666789999999999877644433211 00000000   0


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR  165 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~  165 (258)
                      +.+. -.+.+--+..+++.-++.+++.++ .|.++-+.
T Consensus       206 ~~~~-l~~~~~q~~~~~a~~~v~aiE~~~-NGaiw~v~  241 (261)
T KOG4169|consen  206 IKEA-LERAPKQSPACCAINIVNAIEYPK-NGAIWKVD  241 (261)
T ss_pred             HHHH-HHHcccCCHHHHHHHHHHHHhhcc-CCcEEEEe
Confidence            0000 011223467788999999998862 33344443

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=91.11  E-value=0.8  Score=36.94  Aligned_cols=56  Identities=20%  Similarity=0.210  Sum_probs=49.0

Q ss_pred             cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      ..++.+..|-+.|.+.+.+.++  +.+.||.++++......+++.+||++.| +..+=+
T Consensus        41 ~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~is~~a~~ac~~~~-ipyiR~   98 (248)
T PRK08057         41 DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAAQISANAAAACRALG-IPYLRL   98 (248)
T ss_pred             cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHHHHHHHHHHHHHHhC-CcEEEE
Confidence            3567888899989999999997  7899999999988899999999999999 876554

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=90.63  E-value=2  Score=35.86  Aligned_cols=82  Identities=9%  Similarity=-0.034  Sum_probs=47.1

Q ss_pred             cchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCce-eeeeccchHHHHH
Q 025054           78 SGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPK-AIFNKEEDIATYT  148 (258)
Q Consensus        78 ~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~v~~~D~a~~~  148 (258)
                      .|..+|+.++.+.+.        .++.+..|.||++-..+...+..   .  . ........ +.+ ..+...+|++.++
T Consensus       192 ~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~---~--~-~~~~~~~~-~~pl~r~~~peevA~~~  264 (303)
T PLN02730        192 GMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF---I--D-DMIEYSYA-NAPLQKELTADEVGNAA  264 (303)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc---c--H-HHHHHHHh-cCCCCCCcCHHHHHHHH
Confidence            466799999876642        36889999999886654322100   0  0 00000000 001 1246789999999


Q ss_pred             HHHhcCCC--CCCceEEEcC
Q 025054          149 IKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       149 ~~~l~~~~--~~~~~~~l~g  166 (258)
                      +.++....  ..|+.+.+-|
T Consensus       265 ~fLaS~~a~~itG~~l~vdG  284 (303)
T PLN02730        265 AFLASPLASAITGATIYVDN  284 (303)
T ss_pred             HHHhCccccCccCCEEEECC
Confidence            99987542  2456666643

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=89.76  E-value=3.2  Score=34.50  Aligned_cols=83  Identities=16%  Similarity=0.071  Sum_probs=47.2

Q ss_pred             cchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHH
Q 025054           78 SGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTI  149 (258)
Q Consensus        78 ~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~  149 (258)
                      .|..+|+.++.+.+.        .|+.+..|.||.+...+...+...     . ..............+...+|+++++.
T Consensus       191 ~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~-----~-~~~~~~~~~~p~~r~~~peevA~~v~  264 (299)
T PRK06300        191 GMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFI-----E-RMVDYYQDWAPLPEPMEAEQVGAAAA  264 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccccc-----H-HHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            466799999766542        379999999998876543211000     0 00000000000012457899999999


Q ss_pred             HHhcCCC--CCCceEEEcC
Q 025054          150 KAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       150 ~~l~~~~--~~~~~~~l~g  166 (258)
                      .++....  ..|+.+.+.|
T Consensus       265 ~L~s~~~~~itG~~i~vdG  283 (299)
T PRK06300        265 FLVSPLASAITGETLYVDH  283 (299)
T ss_pred             HHhCccccCCCCCEEEECC
Confidence            9887642  2466666654

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=89.02  E-value=1  Score=31.28  Aligned_cols=55  Identities=22%  Similarity=0.255  Sum_probs=38.3

Q ss_pred             ccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEE
Q 025054            3 YMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v   59 (258)
                      .+.|+.++.||.+|++.|.++ +++++.|+.+....  .....++..+++.+...+++
T Consensus        38 ~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d--~~n~~~~~~~r~~~~~~~ii   93 (116)
T PF02254_consen   38 REEGVEVIYGDATDPEVLERAGIEKADAVVILTDDD--EENLLIALLARELNPDIRII   93 (116)
T ss_dssp             HHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSH--HHHHHHHHHHHHHTTTSEEE
T ss_pred             HhcccccccccchhhhHHhhcCccccCEEEEccCCH--HHHHHHHHHHHHHCCCCeEE
Confidence            457899999999999999986 67899999887754  24445556666643133444

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=88.37  E-value=6.7  Score=31.20  Aligned_cols=94  Identities=20%  Similarity=0.231  Sum_probs=58.0

Q ss_pred             ceeEEeccCCC-HHHHHHhhC-------CCcEEEEccCcc----c----------------hhchHHHHHHHHHhCCcc-
Q 025054            6 NCLIAQGDLHD-HESLVKAIK-------PVDVVISAVGRT----E----------------VEDQFKLIAAIKEVGNIK-   56 (258)
Q Consensus         6 gv~~~~~D~~d-~~~l~~al~-------g~d~Vi~~~~~~----~----------------~~~~~~li~aa~~~g~vk-   56 (258)
                      .+.....|+++ .+++..+++       +.|++++.++..    .                +.+...+..++...  .+ 
T Consensus        58 ~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~  135 (251)
T COG1028          58 RAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPL--MKK  135 (251)
T ss_pred             cEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHh--hhh
Confidence            45677799998 777666554       489999999852    1                12223333322221  22 


Q ss_pred             -EEEc-CCCCCCCCCCCCCCC-CccchhhHHHHHHHHHh-------CCCCeEEEecCccc
Q 025054           57 -RFFP-TEYGSNVDAGHPIEP-AKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSF  106 (258)
Q Consensus        57 -~~v~-S~~~~~~~~~~~~~~-~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~  106 (258)
                       ++|. |+.... ...    + ...|..+|+.++.+.+.       .|+..+.|.||.+-
T Consensus       136 ~~Iv~isS~~~~-~~~----~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         136 QRIVNISSVAGL-GGP----PGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             CeEEEECCchhc-CCC----CCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence             7776 666543 221    2 25677799998765532       57999999999444

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=87.03  E-value=6.2  Score=30.59  Aligned_cols=147  Identities=12%  Similarity=0.064  Sum_probs=77.8

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~vk   56 (258)
                      .....+|+.+..+.+..|+       ..+++++|++...                   +.+.    +..+++....+ ..
T Consensus        64 h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~-~~  142 (256)
T KOG1200|consen   64 HSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQ-QQ  142 (256)
T ss_pred             cceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhc-CC
Confidence            4567788887776655443       4699999999753                   2222    33333322223 23


Q ss_pred             --EEEc-CCCCCCCCCCCCCCCCccchhhHHH-------HHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           57 --RFFP-TEYGSNVDAGHPIEPAKSGYARKAK-------IRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        57 --~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~-------~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                        .+|- |+.-.-....    ....|..+|.-       +-+.+...++.+-.+.||++-.+....+.. ..   ..+..
T Consensus       143 ~~sIiNvsSIVGkiGN~----GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~-~v---~~ki~  214 (256)
T KOG1200|consen  143 GLSIINVSSIVGKIGNF----GQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPP-KV---LDKIL  214 (256)
T ss_pred             CceEEeehhhhcccccc----cchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCH-HH---HHHHH
Confidence              6776 5532211111    12334444433       233444468999999999887765433211 00   00001


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      ..+.-|    -+=..+|+|..+..+..+.. . .|..+.+.|
T Consensus       215 ~~iPmg----r~G~~EevA~~V~fLAS~~ssYiTG~t~evtG  252 (256)
T KOG1200|consen  215 GMIPMG----RLGEAEEVANLVLFLASDASSYITGTTLEVTG  252 (256)
T ss_pred             ccCCcc----ccCCHHHHHHHHHHHhccccccccceeEEEec
Confidence            111111    14467899999888875543 2 366677764

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=82.89  E-value=3.8  Score=32.92  Aligned_cols=51  Identities=22%  Similarity=0.238  Sum_probs=43.9

Q ss_pred             EEeccCCCHHHHHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            9 IAQGDLHDHESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         9 ~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      .+.+-.-+.+.|.+.++  ++|.||.+.++......+|.+++|++.| +..+-+
T Consensus        47 ~~~~G~l~~e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~g-ipy~r~   99 (257)
T COG2099          47 VRVGGFLGAEGLAAFLREEGIDLLIDATHPYAARISQNAARAAKETG-IPYLRL   99 (257)
T ss_pred             eeecCcCCHHHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhC-CcEEEE
Confidence            45555668888888886  7899999999988899999999999999 988776

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	258
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		4e-81
2gas_A	307	Crystal Structure Of Isoflavone Reductase Length =		9e-68
1qyd_A	313	Crystal Structures Of Pinoresinol-Lariciresinol And		4e-57
3c1o_A	321	The Multiple Phenylpropene Synthases In Both Clarki		2e-46
3i52_A	346	Ternary Complex Structure Of Leucoanthocyanidin Red		5e-46
2qw8_A	314	Structure Of Eugenol Synthase From Ocimum Basilicum		2e-41
2r2g_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		2e-41
2qx7_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		3e-41
3c3x_A	318	The Multiple Phenylpropene Synthases In Both Clarki		7e-41

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score =  297 bits (761), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 144/250 (57%), Positives = 180/250 (72%), Gaps = 1/250 (0%)
Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
           I  G + DH SLV+A+K VDVVIS VG  ++E Q  +I AIKEVG +KRFFP+E+G++VD
Sbjct: 60  IVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVD 119
Query: 69  AGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128
             H +EPAKS +             GIP+TYVS NC  G+FL ++AQ G TAPPR+ ++ 
Sbjct: 120 NVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVI 179
Query: 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188
            GDG  + +F KEEDI T+TIKAVDDPRTLNKTLYLR P N  S  ELVALWEKKI KTL
Sbjct: 180 LGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL 239
Query: 189 EKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYA 248
           EK YV E+++L++I D      I + ++ SIF+KG+QTNFEI P +GVEAS+LYPDV Y 
Sbjct: 240 EKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGP-AGVEASQLYPDVKYT 298
Query: 249 TVEEYLDQFV 258
           TV+EYL  FV
Sbjct: 299 TVDEYLSNFV 308

>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307

Iteration: 1
 Score =  253 bits (645), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 120/254 (47%), Positives = 173/254 (68%), Gaps = 1/254 (0%)
Query: 5   INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           +  ++ +GD++DHE+LVKAIK VD+VI A GR  +EDQ K+I AIKE GN+K+FFP+E+G
Sbjct: 55  LGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFG 114
Query: 65  SNVDAGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124
            +VD    +EP +  +             G+P+TY+ C+   G+FL  +AQ  AT PPR+
Sbjct: 115 LDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRD 174
Query: 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
            ++  GDG  K  +  E D+ T+TI+A +DP TLNK +++R PKN  +  E++ALWEKKI
Sbjct: 175 KVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKI 234
Query: 185 GKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPD 244
           GKTLEK YV+E+Q+L+ IQ++S     +L +  S  +KG+   +EIDP+  +EASE YPD
Sbjct: 235 GKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAV-YEIDPAKDIEASEAYPD 293
Query: 245 VDYATVEEYLDQFV 258
           V Y T +EYL+QFV
Sbjct: 294 VTYTTADEYLNQFV 307

>pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313

Iteration: 1
 Score =  218 bits (554), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 110/256 (42%), Positives = 164/256 (64%), Gaps = 7/256 (2%)
Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVG----RTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           + +  L DH+ LV A+K VDVVISA+        + +Q KL+ AIKE GNIKRF P+E+G
Sbjct: 59  LIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFG 118
Query: 65  SNVD-AGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQ-PGATAPP 122
            + D   H ++P    +              IP+TYVS N   G+F  ++AQ  G   PP
Sbjct: 119 MDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPP 178
Query: 123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEK 182
           R+ +L YGDG  K I+  E+D+ TYTIK++DDP+TLNKT+Y+RPP NI S KE++ +WE+
Sbjct: 179 RDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWER 238
Query: 183 KIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELY 242
              + L+KIY++    L  ++D S E+KI+    + IF +G+  NFEI P++ +EA++LY
Sbjct: 239 LSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPNA-IEATKLY 297
Query: 243 PDVDYATVEEYLDQFV 258
           P+V Y T++ YL+++V
Sbjct: 298 PEVKYVTMDSYLERYV 313

>pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321

Iteration: 1
 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 147/250 (58%), Gaps = 1/250 (0%)
Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
           I +G++ +HE +V  +K VD+VISA+    +  Q  +I AIK  GNIKRF P+++G   D
Sbjct: 60  IIEGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEED 119
Query: 69  AGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128
              P+ P +S                +P+TYVS NC   +F+  +  P       ++I+ 
Sbjct: 120 RIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVI 179
Query: 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188
           YG G+ K + N EEDIA YTIK   DPR  N+ +  RPPKNI S  EL++LWE K G + 
Sbjct: 180 YGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSF 239
Query: 189 EKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYA 248
           +K+++ ++Q++++ Q+      I + +  SIF+KG+  ++E+     +EAS LYP++++ 
Sbjct: 240 KKVHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEMR-KDDIEASNLYPELEFT 298
Query: 249 TVEEYLDQFV 258
           +++  LD F+
Sbjct: 299 SIDGLLDLFI 308

>pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346

Iteration: 1
 Score =  180 bits (457), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 138/253 (54%), Gaps = 2/253 (0%)
Query: 8   LIAQGDLHDHESLVKAIKP--VDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGS 65
           +I  G +++ E++ K +K   +D+V+S VG   + DQ  L+ A+K VG IKRF P+E+G 
Sbjct: 63  IIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGH 122
Query: 66  NVDAGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125
           +V+   P+EP  + Y             GIP TY+ CN    +       P    PP + 
Sbjct: 123 DVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDF 182
Query: 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG 185
              YGDG  KA F    DI  +T+K VDD RTLNK+++ RP  N  +  EL ++WEKKIG
Sbjct: 183 FQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIG 242
Query: 186 KTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDV 245
           +TL ++ VTED +L    +      ++      IF+KG Q NF ID    VE + LYP+ 
Sbjct: 243 RTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPED 302
Query: 246 DYATVEEYLDQFV 258
            + TVEE   +++
Sbjct: 303 SFRTVEECFGEYI 315

>pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314

Iteration: 1
 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 150/254 (59%), Gaps = 4/254 (1%)
Query: 5   INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           +  +I +G+L +HE LV+ +K VDVVISA+   ++ DQFK++ AIK  GNIKRF P+++G
Sbjct: 54  LGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFG 113
Query: 65  SNVDAGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124
              D  + + P ++                IP+TYVS NC   +F+  + +P     P++
Sbjct: 114 VEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKD 170
Query: 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
            I  YG G+ K   N E+DI  YTIK   DPR LN+ +  RP  NI +  EL++ WEKKI
Sbjct: 171 EITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKI 230
Query: 185 GKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPD 244
           GK  +KI+V E++I+ + ++    + I + +   +F+ G   +++    + VEAS LYP+
Sbjct: 231 GKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFK-ENDVEASTLYPE 289
Query: 245 VDYATVEEYLDQFV 258
           + + T++E LD FV
Sbjct: 290 LKFTTIDELLDIFV 303

>pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318

Iteration: 1
 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 150/254 (59%), Gaps = 4/254 (1%)
Query: 5   INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           +  +I +G+L +HE LV+ +K VDVVISA+   ++ DQFK++ AIK  GNIKRF P+++G
Sbjct: 58  LGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFG 117
Query: 65  SNVDAGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124
              D  + + P ++                IP+TYVS NC   +F+  + +P     P++
Sbjct: 118 VEEDRINALPPFEALIERQRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKD 174
Query: 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
            I  YG G+ K   N E+DI  YTIK   DPR LN+ +  RP  NI +  EL++ WEKKI
Sbjct: 175 EITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKI 234
Query: 185 GKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPD 244
           GK  +KI+V E++I+ + ++    + I + +   +F+ G   +++    + VEAS LYP+
Sbjct: 235 GKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFK-ENDVEASTLYPE 293
Query: 245 VDYATVEEYLDQFV 258
           + + T++E LD FV
Sbjct: 294 LKFTTIDELLDIFV 307

>pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318

Iteration: 1
 Score =  165 bits (417), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 150/254 (59%), Gaps = 4/254 (1%)
Query: 5   INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           +  +I +G+L +HE LV+ +K VDVVISA+   ++ DQFK++ AIK  GNIKRF P+++G
Sbjct: 58  LGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFG 117
Query: 65  SNVDAGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124
              D  + + P ++                IP+TYVS NC   +F+  + +P     P++
Sbjct: 118 VEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKD 174
Query: 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
            I  YG G+ K   N E+DI  YTIK   DPR LN+ +  RP  NI +  EL++ WEKKI
Sbjct: 175 EITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKI 234
Query: 185 GKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPD 244
           GK  +KI+V E++I+ + ++    + I + +   +F+ G   +++    + VEAS LYP+
Sbjct: 235 GKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFK-ENDVEASTLYPE 293
Query: 245 VDYATVEEYLDQFV 258
           + + T++E LD FV
Sbjct: 294 LKFTTIDELLDIFV 307

>pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318

Iteration: 1
 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 149/254 (58%), Gaps = 4/254 (1%)
Query: 5   INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           +  +I +G+L +HE LV+ +K VDVVISA+   +  DQFK++ AIK  GNIKRF P+++G
Sbjct: 58  LGAIIVKGELDEHEKLVELMKKVDVVISALAVPQYLDQFKILEAIKVAGNIKRFLPSDFG 117
Query: 65  SNVDAGHPIEPAKSGYXXXXXXXXXXXXXGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124
              D  + + P ++                IP+TYVS NC   +F+  + +P     P++
Sbjct: 118 VEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKD 174
Query: 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184
            I  YG G+ K   N E+DI  YTIK   DPR LN+ +  RP  NI +  EL++ WEKKI
Sbjct: 175 EITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKI 234
Query: 185 GKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPD 244
           GK  +KI+V E++I+ + ++    + I + +   +F+ G   +++    + VEAS LYP+
Sbjct: 235 GKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFK-ENDVEASTLYPE 293
Query: 245 VDYATVEEYLDQFV 258
           + + T++E LD FV
Sbjct: 294 LKFTTIDELLDIFV 307

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	258
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	6e-95
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	2e-91
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	3e-90
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-88
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	4e-87
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	3e-16
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	5e-15
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	5e-11
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	9e-11
1xq6_A	253	Unknown protein; structural genomics, protein stru	8e-10
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	7e-09
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	9e-08
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-07
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	3e-07
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-06
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	9e-06
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	6e-05

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score =  281 bits (719), Expect = 3e-95
 Identities = 129/250 (51%), Positives = 180/250 (72%), Gaps = 1/250 (0%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
           + +GD++DHE+LVKAIK VD+VI A GR  +EDQ K+I AIKE GN+K+FFP+E+G +VD
Sbjct: 59  LLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVD 118

Query: 69  AGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128
               +EP +  +  KA IRR IEAEG+P+TY+ C+   G+FL  +AQ  AT PPR+ ++ 
Sbjct: 119 RHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVI 178

Query: 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188
            GDG  K  +  E D+ T+TI+A +DP TLNK +++R PKN  +  E++ALWEKKIGKTL
Sbjct: 179 LGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTL 238

Query: 189 EKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYA 248
           EK YV+E+Q+L+ IQ++S     +L +  S  +KG+   +EIDP+  +EASE YPDV Y 
Sbjct: 239 EKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAV-YEIDPAKDIEASEAYPDVTYT 297

Query: 249 TVEEYLDQFV 258
           T +EYL+QFV
Sbjct: 298 TADEYLNQFV 307

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score =  280 bits (717), Expect = 6e-95
 Identities = 154/250 (61%), Positives = 191/250 (76%), Gaps = 1/250 (0%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
           I  G + DH SLV+A+K VDVVIS VG  ++E Q  +I AIKEVG +KRFFP+E+G++VD
Sbjct: 60  IVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVD 119

Query: 69  AGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128
             H +EPAKS +  KAK+RRAIEAEGIP+TYVS NC  G+FL ++AQ G TAPPR+ ++ 
Sbjct: 120 NVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVI 179

Query: 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188
            GDG  + +F KEEDI T+TIKAVDDPRTLNKTLYLR P N  S  ELVALWEKKI KTL
Sbjct: 180 LGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL 239

Query: 189 EKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYA 248
           EK YV E+++L++I D      I + ++ SIF+KG+QTNFEI P +GVEAS+LYPDV Y 
Sbjct: 240 EKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGP-AGVEASQLYPDVKYT 298

Query: 249 TVEEYLDQFV 258
           TV+EYL  FV
Sbjct: 299 TVDEYLSNFV 308

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score =  271 bits (695), Expect = 2e-91
 Identities = 98/250 (39%), Positives = 156/250 (62%), Gaps = 1/250 (0%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
           I +G++ +HE +V  +K VD+VISA+    +  Q  +I AIK  GNIKRF P+++G   D
Sbjct: 60  IIEGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEED 119

Query: 69  AGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128
              P+ P +S   +K  IRRAIEA  +P+TYVS NC   +F+  +  P       ++I+ 
Sbjct: 120 RIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVI 179

Query: 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188
           YG G+ K + N EEDIA YTIK   DPR  N+ +  RPPKNI S  EL++LWE K G + 
Sbjct: 180 YGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSF 239

Query: 189 EKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYA 248
           +K+++ ++Q++++ Q+      I + +  SIF+KG+  ++E+     +EAS LYP++++ 
Sbjct: 240 KKVHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEMRK-DDIEASNLYPELEFT 298

Query: 249 TVEEYLDQFV 258
           +++  LD F+
Sbjct: 299 SIDGLLDLFI 308

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score =  269 bits (690), Expect = 3e-90
 Identities = 97/252 (38%), Positives = 144/252 (57%), Gaps = 2/252 (0%)

Query: 9   IAQGDLHDHESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSN 66
           I  G +++ E++ K +K   +D+V+S VG   + DQ  L+ A+K VG IKRF P+E+G +
Sbjct: 64  IVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHD 123

Query: 67  VDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126
           V+   P+EP  + Y  K ++R+ +E  GIP TY+ CN    +       P    PP +  
Sbjct: 124 VNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFF 183

Query: 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186
             YGDG  KA F    DI  +T+K VDD RTLNK+++ RP  N  +  EL ++WEKKIG+
Sbjct: 184 QIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR 243

Query: 187 TLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVD 246
           TL ++ VTED +L    +      ++      IF+KG Q NF ID    VE + LYP+  
Sbjct: 244 TLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDS 303

Query: 247 YATVEEYLDQFV 258
           + TVEE   +++
Sbjct: 304 FRTVEECFGEYI 315

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score =  263 bits (674), Expect = 2e-88
 Identities = 118/256 (46%), Positives = 172/256 (67%), Gaps = 7/256 (2%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRT----EVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           + +  L DH+ LV A+K VDVVISA+        + +Q KL+ AIKE GNIKRF P+E+G
Sbjct: 59  LIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFG 118

Query: 65  SNVDAG-HPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQ-PGATAPP 122
            + D   H ++P    +  K K+RRAIEA  IP+TYVS N   G+F  ++AQ  G   PP
Sbjct: 119 MDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPP 178

Query: 123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEK 182
           R+ +L YGDG  K I+  E+D+ TYTIK++DDP+TLNKT+Y+RPP NI S KE++ +WE+
Sbjct: 179 RDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWER 238

Query: 183 KIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELY 242
              + L+KIY++    L  ++D S E+KI+    + IF +G+  NFEI P + +EA++LY
Sbjct: 239 LSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGP-NAIEATKLY 297

Query: 243 PDVDYATVEEYLDQFV 258
           P+V Y T++ YL+++V
Sbjct: 298 PEVKYVTMDSYLERYV 313

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score =  260 bits (667), Expect = 4e-87
 Identities = 103/250 (41%), Positives = 156/250 (62%), Gaps = 4/250 (1%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVD 68
           I +G+L +HE LV+ +K VDVVISA+   ++ DQFK++ AIK  GNIKRF P+++G   D
Sbjct: 62  IVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEED 121

Query: 69  AGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128
             + + P ++   RK  IRRAIE   IP+TYVS NC   +F+  + +P     P++ I  
Sbjct: 122 RINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEITV 178

Query: 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188
           YG G+ K   N E+DI  YTIK   DPR LN+ +  RP  NI +  EL++ WEKKIGK  
Sbjct: 179 YGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKF 238

Query: 189 EKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYA 248
           +KI+V E++I+ + ++    + I + +   +F+ G   +++    + VEAS LYP++ + 
Sbjct: 239 KKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKE-NDVEASTLYPELKFT 297

Query: 249 TVEEYLDQFV 258
           T++E LD FV
Sbjct: 298 TIDELLDIFV 307

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 22/167 (13%), Positives = 49/167 (29%), Gaps = 26/167 (15%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVG--------RTEVEDQFKLIAAIKEVGNIKRF-F 59
           +  GD+     + K +   D VI  +G            E    ++AA+K  G + +   
Sbjct: 50  VVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVA 108

Query: 60  PTEYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGA- 118
            T      D        ++      ++ + +   G+ +  V               P   
Sbjct: 109 CTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVM--------------PPHI 154

Query: 119 -TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYL 164
              P         DG+  +    + D+  + ++ +        + Y 
Sbjct: 155 GDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 72.0 bits (177), Expect = 5e-15
 Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 30/256 (11%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVIS-------AVGRTEVEDQFKLIAAIKEVGNIKRFFPT 61
           + QGD  D   +  A+                    EV+    L    + +G +      
Sbjct: 55  VVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVV-- 111

Query: 62  EYGS--NVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGAT 119
            Y    N+        A + +  K ++       G+P T V   C F   L       A 
Sbjct: 112 -YSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAP 170

Query: 120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-RTLNKTLYLRPPKNIYSFKELVA 178
                 +       P    +   D+    +  +  P + + + + L   +  ++ +E  A
Sbjct: 171 DGKSYLLSLPTGDVPMDGMS-VSDLGPVVLSLLKMPEKYVGQNIGLSTCR--HTAEEYAA 227

Query: 179 LWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEA 238
           L  K   K +    +T +   ++    + +   M    F  +      + E         
Sbjct: 228 LLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANM----FRFYALRPDRDIE-------LT 276

Query: 239 SELYPDVDYATVEEYL 254
             L P     T++++L
Sbjct: 277 LRLNPKA--LTLDQWL 290

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 60.8 bits (148), Expect = 5e-11
 Identities = 36/195 (18%), Positives = 65/195 (33%), Gaps = 19/195 (9%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVI----SAVGRTEVEDQFK-LIAAIKEVGNIKRFFPTEY 63
           +  GD +  ESL KA   V  ++         T +  Q   ++ A ++ G +K      Y
Sbjct: 49  VRHGDYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAG-VKHIA---Y 104

Query: 64  GSNVDAGHPIEPAKSGYAR-KAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPP 122
                A    E +    A        AI    IP+T++        +       G  A  
Sbjct: 105 TGYAFA----EESIIPLAHVHLATEYAIRTTNIPYTFLRN----ALYTDFFVNEGLRAST 156

Query: 123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEK 182
               +    G          ++A      + +    NKT  L   +  ++F EL  +  +
Sbjct: 157 ESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQP-WTFDELAQILSE 215

Query: 183 KIGKTLEKIYVTEDQ 197
             GK +    V+ ++
Sbjct: 216 VSGKKVVHQPVSFEE 230

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 60.2 bits (146), Expect = 9e-11
 Identities = 33/216 (15%), Positives = 70/216 (32%), Gaps = 24/216 (11%)

Query: 9   IAQGDLHD-HESLVKAIKPVD---VVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64
           + QG L +    +    +      +  ++    E+     L  A K  G I+ +    Y 
Sbjct: 55  LFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYI---YS 111

Query: 65  SNVDAG-HPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFF---LPTMAQPGATA 120
           S  D   +   PA   +A K  +   +   G+P T+V      G +     ++  P    
Sbjct: 112 SMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVY----AGIYNNNFTSLPYPLFQM 167

Query: 121 PPREN-----ILFYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSF 173
               +        +    P    + E D+    ++   D   +     + L       S 
Sbjct: 168 ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFET--LSP 225

Query: 174 KELVALWEKKIGKTLEKIYVTEDQILQMIQDASNED 209
            ++ A + + + + +  + V + +I   I     E 
Sbjct: 226 VQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQ 261

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 56.8 bits (137), Expect = 8e-10
 Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 47/213 (22%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVG----------------------------RTEVE 40
           +  GD+ D +S+  A + +D ++                                + +  
Sbjct: 52  VFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWI 111

Query: 41  DQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAK----SGYAR-KAKIRRAIEAEGI 95
            Q   I A K  G +K         ++   +P  P            K K  + +   G 
Sbjct: 112 GQKNQIDAAKVAG-VKHIV---VVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGT 167

Query: 96  PHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP 155
           P+T +      G  L            +++ L   D +         D+A   I+A+   
Sbjct: 168 PYTIIRA----GGLLDKEGGVRELLVGKDDELLQTDTKTVPR----ADVAEVCIQALLFE 219

Query: 156 RTLNKTLYL--RPPKNIYSFKELVALWEKKIGK 186
              NK   L  +P       K+  AL+ +   +
Sbjct: 220 EAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 24/196 (12%)

Query: 9   IAQGDLHDHESLVKAIKPVDVV--ISAVGRTEVEDQFK-LIAAIKEVGNIKRFFPTEYGS 65
           + Q D  D  +L  A++ V+ +  IS+    +   Q + +I A K  G +K      Y S
Sbjct: 48  VRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAG-VKFIA---YTS 103

Query: 66  NVDAGHPIEPAKSGYAR-KAKIRRAIEAEGIPHTYVSCNC---SFGFFLPTMAQPGATAP 121
            + A    + +  G A    +  + +   GI +T +       ++    P   + G    
Sbjct: 104 LLHA----DTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIG 159

Query: 122 PRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWE 181
                   GDG+  +      D A    + + +     K   L      ++  +L A   
Sbjct: 160 A------AGDGKIASA--TRADYAAAAARVISEAGHEGKVYELAGDSA-WTLTQLAAELT 210

Query: 182 KKIGKTLEKIYVTEDQ 197
           K+ GK +    ++E  
Sbjct: 211 KQSGKQVTYQNLSEAD 226

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 50.4 bits (121), Expect = 9e-08
 Identities = 31/169 (18%), Positives = 51/169 (30%), Gaps = 34/169 (20%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVG--------RTEVEDQF---KLIAAIKEVGNIKR 57
           I   +L +      A   +D V+ A G        +T + D +   K I   ++ G IKR
Sbjct: 69  IVVANLEE--DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKR 125

Query: 58  F-FPTEYGSNVDAGHPIEPAKSGYAR-KAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQ 115
           F   +  G+      P       Y   K      ++   + +T V              +
Sbjct: 126 FIMVSSVGTVDPDQGP--MNMRHYLVAKRLADDELKRSSLDYTIV--------------R 169

Query: 116 PGA--TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTL 162
           PG          +                D+A    + VD   T+ KT 
Sbjct: 170 PGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTF 218

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 41/199 (20%), Positives = 68/199 (34%), Gaps = 28/199 (14%)

Query: 9   IAQGDLHDHESLVKAIKPVDVV--ISAVGRTEVEDQFK----LIAAIKEVGNIKRFFPTE 62
           + Q D  + ES+V+A K +D V  I ++       +      L+ A K+ G +       
Sbjct: 48  VRQLDYFNQESMVEAFKGMDTVVFIPSII-HPSFKRIPEVENLVYAAKQSG-VAHII--- 102

Query: 63  YGSNVDAGHPIEPAKSGYARK-AKIRRAIEAEGIPHTYVSCNC---SFGFFLPTMAQPGA 118
           +                 +       R +   GI +TYV           +LP +     
Sbjct: 103 FIGYYADQ---HNNPFHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHK 159

Query: 119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVA 178
              P       GDG  +  +    DIA   I  + +P T  K   L      Y  KEL A
Sbjct: 160 LIYP------AGDG--RINYITRNDIARGVIAIIKNPDTWGKRYLLSGYS--YDMKELAA 209

Query: 179 LWEKKIGKTLEKIYVTEDQ 197
           +  +  G  ++   V+ + 
Sbjct: 210 ILSEASGTEIKYEPVSLET 228

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 49.0 bits (117), Expect = 3e-07
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 24/164 (14%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFK-LIAAIKEVGNIKRF------FPT 61
           I  GD+ +H +L +A++  D+V + +   +++ Q   +IAA+K    +KR          
Sbjct: 71  IIMGDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD-VKRLIFVLSLGIY 129

Query: 62  EYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPG--AT 119
           +                      +   AIEA G+ +T +               P     
Sbjct: 130 DEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILR--------------PAWLTD 175

Query: 120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLY 163
               +  L   +   K      + +A      +D P        
Sbjct: 176 EDIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENI 219

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 45.4 bits (108), Expect = 4e-06
 Identities = 27/169 (15%), Positives = 54/169 (31%), Gaps = 33/169 (19%)

Query: 9   IAQGDLH-DHESLVKAIKPVDVVISAVG-------RTEVEDQFKLIAAIKEVGNIKRF-F 59
               D+    E + K +  +D +I+  G       + ++    KL+ A ++   +KRF  
Sbjct: 45  AVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFIL 103

Query: 60  PTEYGSNVDAGHPIEPAKS--GYARKAKIRRA---IEAEGIPHTYVSCNCSFGFFLPTMA 114
            +   S            +   Y   AK        +   + +T +              
Sbjct: 104 LSTIFSLQPEKWIGAGFDALKDYYI-AKHFADLYLTKETNLDYTII-------------- 148

Query: 115 QPGA-TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTL 162
           QPGA T      ++   D    +      D+A    + V    ++ K +
Sbjct: 149 QPGALTEEEATGLIDINDEVSASNTI--GDVADTIKELVMTDHSIGKVI 195

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 44.3 bits (105), Expect = 9e-06
 Identities = 30/181 (16%), Positives = 53/181 (29%), Gaps = 42/181 (23%)

Query: 9   IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQF---------KLIAAIKEVGNIKRF- 58
           + + D+   + + +  K  D VISA                    +I  +K+ G + RF 
Sbjct: 50  VKKADVSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFL 108

Query: 59  --------FPTEYGSNVDAGHPIEPAKSGYARKAKI--RRAIEAEGIPHTYVSCNCSFGF 108
                   F       +D+G   E    G     +      ++ + I   + S       
Sbjct: 109 MVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS------- 161

Query: 109 FLPTMAQPGATAPPRENILFYGDGQPKAIFNKE-------EDIATYTIKAVDDPRTLNKT 161
                  P A   P      Y  G+   I +         ED A   I  ++ P+   + 
Sbjct: 162 -------PAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQER 214

Query: 162 L 162
            
Sbjct: 215 F 215

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 12/102 (11%), Positives = 32/102 (31%), Gaps = 7/102 (6%)

Query: 6   NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGS 65
              + +G   +   L +A+   +VV          D   ++ A+      +    +  G 
Sbjct: 53  RVTVIEGSFQNPGXLEQAVTNAEVVFVGAM-ESGSDMASIVKALSRXNIRRVIGVSMAGL 111

Query: 66  NVDAGHPIEP------AKSGYARKAKIRRAIEAEGIPHTYVS 101
           + +    +E         S    + + R  +    + +T + 
Sbjct: 112 SGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILR 153

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	258
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	100.0
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	100.0
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	100.0
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	100.0
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	100.0
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.95
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.95
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.92
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.9
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.9
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.89
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.88
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.88
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.88
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.87
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.87
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.87
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.87
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.86
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.86
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.86
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.85
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.85
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.85
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.85
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.85
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.84
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.84
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.84
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.84
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.84
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.84
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.83
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.83
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.83
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.83
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.83
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.82
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.82
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.82
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.82
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.81
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.81
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.81
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.81
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.8
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.8
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.8
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.79
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.79
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.79
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.79
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.79
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.78
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.78
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.78
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.78
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.78
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.77
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.77
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.77
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.77
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.77
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.75
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.73
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.73
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.73
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.73
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.73
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.72
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.71
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.71
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.69
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.68
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.68
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.68
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.68
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.66
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.66
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.65
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.65
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.65
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.65
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.63
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.6
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.49
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.26
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.18
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.15
1spx_A	278	Short-chain reductase family member (5L265); paral	99.12
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.12
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.09
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.02
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.98
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	98.98
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	98.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.94
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	98.94
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.93
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.92
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.91
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	98.91
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.91
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.91
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.91
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	98.9
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.89
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	98.89
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.89
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	98.89
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.88
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.86
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	98.85
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.85
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.84
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.84
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	98.82
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.82
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.81
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.81
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.8
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.8
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.8
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.8
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.8
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	98.78
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	98.78
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.78
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.78
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	98.77
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.77
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.75
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.75
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.75
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.74
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	98.74
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	98.73
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	98.73
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	98.73
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.73
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.72
3cxt_A	291	Dehydrogenase with different specificities; rossma	98.72
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.71
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.7
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.7
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	98.7
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.7
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.69
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.69
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	98.69
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	98.69
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.69
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.68
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.67
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.67
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.66
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.66
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	98.65
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.64
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	98.63
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	98.63
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	98.63
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	98.63
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.62
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	98.62
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.61
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.61
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	98.61
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.61
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	98.61
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	98.61
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.61
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.6
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	98.6
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.6
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.6
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	98.6
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	98.6
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.59
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.59
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	98.59
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	98.59
3rih_A	293	Short chain dehydrogenase or reductase; structural	98.58
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.58
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	98.58
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	98.57
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.57
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.57
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	98.56
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	98.54
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	98.54
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.54
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.53
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.53
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	98.53
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	98.52
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.52
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.52
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.51
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	98.51
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.51
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	98.5
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.5
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.5
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	98.5
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	98.49
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	98.49
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.49
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.49
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.49
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.49
4e4y_A	244	Short chain dehydrogenase family protein; structur	98.48
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	98.48
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.47
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.47
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	98.46
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	98.46
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.46
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	98.45
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	98.45
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.45
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.44
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	98.44
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	98.44
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.43
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	98.43
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.42
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.4
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	98.4
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	98.4
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.4
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.39
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.39
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	98.39
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.38
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	98.37
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.35
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.35
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.34
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	98.34
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	98.34
1xkq_A	280	Short-chain reductase family member (5D234); parra	98.34
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.34
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	98.34
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.34
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	98.31
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	98.31
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.31
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.3
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.3
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.3
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	98.29
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.28
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	98.26
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	98.24
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	98.24
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.22
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.19
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.18
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	98.15
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	98.15
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	98.14
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	98.14
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	98.13
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	98.11
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	98.08
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	98.07
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	98.07
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	98.07
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	98.06
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	98.05
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	98.03
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	98.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	98.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.99
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.96
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.95
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.9
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	97.84
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.83
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.83
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.8
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.79
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.76
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.72
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.65
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	97.59
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.47
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.43
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	97.33
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.32
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.28
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.14
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	96.99
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.8
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.78
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	96.47
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.39
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	96.07
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.05
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	95.82
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.71
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.22
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	94.5
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.07
1id1_A	153	Putative potassium channel protein; RCK domain, E.	93.61
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	93.49
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	93.21
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	93.1
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	92.93
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	92.08
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	91.8
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	91.46
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	91.38
3c85_A	183	Putative glutathione-regulated potassium-efflux S	90.57
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	90.29
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	90.23
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	90.12
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	89.62
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	89.52
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	88.97
1lnq_A	336	MTHK channels, potassium channel related protein;	88.82
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	88.13
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	87.76
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	87.59
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	86.99
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	86.83
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	85.81
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	85.51
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	82.69
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	82.17

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=100.00  E-value=3.7e-39  Score=271.53  Aligned_cols=253  Identities=39%  Similarity=0.706  Sum_probs=219.4

Q ss_pred             cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCCCCCCCCCCCCCCCccchh
Q 025054            4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYA   81 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~~~~~~~~~~~~   81 (258)
                      ..+++++.+|++|.+++.++++  ++|+|||+++..++..++++++||+++|++++||+|++|....+..+..+..+|+.
T Consensus        59 ~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~y~~  138 (346)
T 3i6i_A           59 DKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYR  138 (346)
T ss_dssp             HTTCEEEECCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCCCCTTHHHHHH
T ss_pred             hCCcEEEEeecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeecccCCCCCccCcCCCcchHHH
Confidence            4689999999999999999999  99999999999889999999999999988999999999876554444456678889


Q ss_pred             hHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCce
Q 025054           82 RKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKT  161 (258)
Q Consensus        82 ~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~  161 (258)
                      +|..+|+++++.+++||++|||+|+|++.+.+..+.......+.+.++|+|+.++++++++|+|++++.++.+++..++.
T Consensus       139 sK~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~  218 (346)
T 3i6i_A          139 EKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKS  218 (346)
T ss_dssp             HHHHHHHHHHHTTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEE
T ss_pred             HHHHHHHHHHHcCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeE
Confidence            99999999999999999999999999887655443322234556888999999999999999999999999998777999


Q ss_pred             EEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhhheeeeeEEEecCCccccCC-CCCcccccc
Q 025054          162 LYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEID-PSSGVEASE  240 (258)
Q Consensus       162 ~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~  240 (258)
                      ++++|+++.+|++|+++.+++.+|+++++..+|.+++.+.+...++|.+..+.+++.++..|...+|++. +. ..+.++
T Consensus       219 ~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~  297 (346)
T 3i6i_A          219 VHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPE-DVEVTT  297 (346)
T ss_dssp             EECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTT-EEEHHH
T ss_pred             EEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCC-cccHHH
Confidence            9999877899999999999999999999999999999999988888888877888888888887777774 43 356789


Q ss_pred             cCCCCcccCHHHHHhhh
Q 025054          241 LYPDVDYATVEEYLDQF  257 (258)
Q Consensus       241 ~~~~~~~~s~ee~l~~~  257 (258)
                      ++|++++||++|||+++
T Consensus       298 ~~p~~~~t~~~e~l~~~  314 (346)
T 3i6i_A          298 LYPEDSFRTVEECFGEY  314 (346)
T ss_dssp             HSTTCCCCCHHHHHHHH
T ss_pred             hCCCCCcCcHHHHHHHH
Confidence            99999999999999976

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-38  Score=263.07  Aligned_cols=254  Identities=61%  Similarity=0.986  Sum_probs=207.3

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCCCCCCCCCCCCCCCccchhhH
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYARK   83 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~~~~~~~~~~~~~k   83 (258)
                      ..|++++.+|++|++++.++++++|+|||+++...+..++++++||+++|+|+|||+|++|.+..+..+..|..++|.+|
T Consensus        55 ~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK  134 (308)
T 1qyc_A           55 ASGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVK  134 (308)
T ss_dssp             TTTCEEECCCTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHH
T ss_pred             hCCCEEEEeccCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeecccccCccccccCCcchhHHHHH
Confidence            46899999999999999999999999999999877788999999999997699999999886544322222333456999


Q ss_pred             HHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEE
Q 025054           84 AKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLY  163 (258)
Q Consensus        84 ~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~  163 (258)
                      ..+|+++++.++++|++||++|++++.+.+..........+.+.++++++.++++++++|+|++++.++.++...++.++
T Consensus       135 ~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~  214 (308)
T 1qyc_A          135 AKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLY  214 (308)
T ss_dssp             HHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEE
T ss_pred             HHHHHHHHhcCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEE
Confidence            99999999999999999999999987665433221122345677888899999999999999999999998766789999


Q ss_pred             EcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhhheeeeeEEEecCCccccCCCCCcccccccCC
Q 025054          164 LRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYP  243 (258)
Q Consensus       164 l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~  243 (258)
                      +.|+++.+|++|+++.+++.+|+++++..+|.+++.+.+...++|.+..+..++.++..|....|.+++. ..+.++++|
T Consensus       215 ~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p  293 (308)
T 1qyc_A          215 LRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLYP  293 (308)
T ss_dssp             CCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHHHHHHHHTSCTTHHHHHHHHHHHHTTCTTTSSCCCTT-EEEHHHHCT
T ss_pred             EeCCCCccCHHHHHHHHHHHhCCCCceEeCCHHHHHHHHhcCCCchhhHHHhhhheeecCcccccccCCc-cccHHhhCC
Confidence            9877678999999999999999999999999999999888878887765555555555554333554442 235678899


Q ss_pred             CCcccCHHHHHhhhC
Q 025054          244 DVDYATVEEYLDQFV  258 (258)
Q Consensus       244 ~~~~~s~ee~l~~~~  258 (258)
                      +++++|+||||++++
T Consensus       294 ~~~~~t~~~~l~~~~  308 (308)
T 1qyc_A          294 DVKYTTVDEYLSNFV  308 (308)
T ss_dssp             TCCCCCHHHHHHTTC
T ss_pred             CcccccHHHHHHHhC
Confidence            999999999999875

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=100.00  E-value=5.9e-38  Score=259.81  Aligned_cols=253  Identities=49%  Similarity=0.850  Sum_probs=206.2

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCCCCCCCCCCCCCCCccchhhH
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYARK   83 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~~~~~~~~~~~~~k   83 (258)
                      ..|++++.+|++|++++.++++++|+|||+++...+..++++++||+++|+|+|||+|++|.+.+......|..++|.+|
T Consensus        54 ~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK  133 (307)
T 2gas_A           54 SLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVFEEK  133 (307)
T ss_dssp             HTTCEEEECCTTCHHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHH
T ss_pred             hCCCEEEEeCCCCHHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcCCceEEeecccccCcccccCCCcchhHHHHH
Confidence            36899999999999999999999999999999877788999999999997699999998886544322222323445999


Q ss_pred             HHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEE
Q 025054           84 AKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLY  163 (258)
Q Consensus        84 ~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~  163 (258)
                      ..+|+++++.+++||++|||+|++++.+.+..........+.+.++++|+.++++++++|+|++++.++.++...++.++
T Consensus       134 ~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~  213 (307)
T 2gas_A          134 ASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVH  213 (307)
T ss_dssp             HHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEE
T ss_pred             HHHHHHHHHcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEE
Confidence            99999999999999999999999988765433221122344677788889999999999999999999998766788999


Q ss_pred             EcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhhheeeeeEEEecCCc-cccCCCCCcccccccC
Q 025054          164 LRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQT-NFEIDPSSGVEASELY  242 (258)
Q Consensus       164 l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~  242 (258)
                      +.|+++.+|++|+++.+++.+|+++++..+|.+++.+.+...++|++..+..++.++..|... .|...+  ..+.++++
T Consensus       214 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  291 (307)
T 2gas_A          214 IRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAK--DIEASEAY  291 (307)
T ss_dssp             CCCGGGEEEHHHHHHHHHHHHTSCCEEEEECHHHHHHHHHHBCTTHHHHHHHHHHHHTSCTTCCCCCTTT--EEEHHHHC
T ss_pred             EeCCCCcCCHHHHHHHHHHHhCCCCceeecCHHHHHHHHhcCCCchhHHHHHHHHHeecCcccCCCCcCC--CcchHhhC
Confidence            987767899999999999999999999999999999988887888776555566666556533 344433  23567899


Q ss_pred             CCCcccCHHHHHhhhC
Q 025054          243 PDVDYATVEEYLDQFV  258 (258)
Q Consensus       243 ~~~~~~s~ee~l~~~~  258 (258)
                      |+++++|+||||++++
T Consensus       292 p~~~~~t~~~~l~~~~  307 (307)
T 2gas_A          292 PDVTYTTADEYLNQFV  307 (307)
T ss_dssp             TTCCCCCHHHHHGGGC
T ss_pred             CCCccccHHHHHHHhC
Confidence            9999999999999875

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-37  Score=257.40  Aligned_cols=254  Identities=46%  Similarity=0.833  Sum_probs=203.7

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCcc----chhchHHHHHHHHHhCCccEEEcCCCCCCCCC-CCCCCCCcc
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRT----EVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDA-GHPIEPAKS   78 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~----~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~-~~~~~~~~~   78 (258)
                      ..|++++.+|++|++++.++++++|+|||+++..    ++..++++++||+++|+|+|||+|++|.+... ..+..|..+
T Consensus        54 ~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~  133 (313)
T 1qyd_A           54 QLGAKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSI  133 (313)
T ss_dssp             TTTCEEECCCSSCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTH
T ss_pred             hCCeEEEeCCCCCHHHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcc
Confidence            4689999999999999999999999999999865    47889999999999876999999988865432 112223345


Q ss_pred             chhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCC-CCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCC
Q 025054           79 GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPG-ATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRT  157 (258)
Q Consensus        79 ~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~  157 (258)
                      +|.+|..+|+++++.++++|++||++|++++.+.+.... ......+.+.++++|+.++++++++|+|++++.++.++..
T Consensus       134 ~y~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~  213 (313)
T 1qyd_A          134 TFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT  213 (313)
T ss_dssp             HHHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG
T ss_pred             hHHHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc
Confidence            569999999999999999999999999998776543321 0112344566788889999999999999999999998866


Q ss_pred             CCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhhheeeeeEEEecCCccccCCCCCccc
Q 025054          158 LNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVE  237 (258)
Q Consensus       158 ~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~  237 (258)
                      .++.+++.|+++.+|++|+++.+++.+|+++++..+|.+++.+.+...++|.+..+..++.++..|....|...+. ..+
T Consensus       214 ~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  292 (313)
T 1qyd_A          214 LNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPN-AIE  292 (313)
T ss_dssp             SSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHHHHHHHTTSCTTHHHHTTTHHHHTTSCTTTSSCCCSS-EEE
T ss_pred             CCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECCHHHHHHHHhcCCCcccchhhheeeEEecccccCCCcCcc-ccc
Confidence            7899999887678999999999999999999999999999988887777787665555555555554333444332 234


Q ss_pred             ccccCCCCcccCHHHHHhhhC
Q 025054          238 ASELYPDVDYATVEEYLDQFV  258 (258)
Q Consensus       238 ~~~~~~~~~~~s~ee~l~~~~  258 (258)
                      .++++||++++||+||+++++
T Consensus       293 ~~~~~p~~~~~t~~~~l~~~~  313 (313)
T 1qyd_A          293 ATKLYPEVKYVTMDSYLERYV  313 (313)
T ss_dssp             HHHHCTTSCCCCHHHHHTTTC
T ss_pred             HhhcCCCcccccHHHHHHhhC
Confidence            568899999999999999875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=100.00  E-value=1.3e-36  Score=253.14  Aligned_cols=250  Identities=41%  Similarity=0.736  Sum_probs=201.6

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCCCCCCCCCCCCCCCccchhhH
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYARK   83 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~~~~~~~~~~~~~k   83 (258)
                      ..|++++.+|++|++++.++++++|+|||+++...+..+++++++|+++|+++|||+|++|.+..+.....|..++|.+|
T Consensus        57 ~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK  136 (318)
T 2r6j_A           57 SLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERK  136 (318)
T ss_dssp             HTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHH
Confidence            46899999999999999999999999999998776788999999999987699999998886543322212223455999


Q ss_pred             HHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEE
Q 025054           84 AKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLY  163 (258)
Q Consensus        84 ~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~  163 (258)
                      ..+|+++++.++++|++||++|++++.+.+....   ...+.+.++++++.++++++++|+|++++.++.++...++.++
T Consensus       137 ~~~e~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~  213 (318)
T 2r6j_A          137 RMIRRAIEEANIPYTYVSANCFASYFINYLLRPY---DPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVI  213 (318)
T ss_dssp             HHHHHHHHHTTCCBEEEECCEEHHHHHHHHHCTT---CCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEE
T ss_pred             HHHHHHHHhcCCCeEEEEcceehhhhhhhhcccc---CCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEE
Confidence            9999999999999999999999998765432211   2344677888889999999999999999999998766788999


Q ss_pred             EcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhhheeeeeEEEecCCccccCCCCCcccccccCC
Q 025054          164 LRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYP  243 (258)
Q Consensus       164 l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~  243 (258)
                      +.|+++.+|++|+++.+++.+|+++++..+|.+++.+.+...++|....+..++.++..|....+..++. ....++++|
T Consensus       214 ~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p  292 (318)
T 2r6j_A          214 YRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYP  292 (318)
T ss_dssp             CCCGGGEEEHHHHHHHHHHHHTCCCEEEEECHHHHHHHHHHSCTTTHHHHHHHHHHHTSCTTTSSCCCTT-CEEGGGTCT
T ss_pred             ecCCCCccCHHHHHHHHHHHhCCCCceeecCHHHHHHHHhcCCCcchhhhheeeeEEecCCCCCCCcccc-cchHHHhCC
Confidence            9876679999999999999999999999999999988887777777665444555555554333444331 235678899


Q ss_pred             CCcccCHHHHHhhh
Q 025054          244 DVDYATVEEYLDQF  257 (258)
Q Consensus       244 ~~~~~s~ee~l~~~  257 (258)
                      +++++|+||||++.
T Consensus       293 ~~~~~~~~~~l~~~  306 (318)
T 2r6j_A          293 ELKFTTIDELLDIF  306 (318)
T ss_dssp             TCCCCCHHHHHHHH
T ss_pred             CCccccHHHHHHHH
Confidence            99999999999975

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=100.00  E-value=1.3e-36  Score=253.44  Aligned_cols=253  Identities=39%  Similarity=0.712  Sum_probs=200.9

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCCCCCCCCCCCCCCCccchhhH
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYARK   83 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~~~~~~~~~~~~~k   83 (258)
                      ..|++++.+|++|++++.++++++|+|||+++...+..+++++++|+++|+|+|||+|++|.+..+.....|..++|.+|
T Consensus        55 ~~~v~~v~~D~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK  134 (321)
T 3c1o_A           55 SMGVTIIEGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKK  134 (321)
T ss_dssp             HTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHH
T ss_pred             cCCcEEEEecCCCHHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHH
Confidence            46899999999999999999999999999999776788999999999987699999988876433222111212344999


Q ss_pred             HHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEE
Q 025054           84 AKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLY  163 (258)
Q Consensus        84 ~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~  163 (258)
                      ..+|+++++.+++||+|||++|++++.+.+..........+.+.++++++.++++++++|+|++++.++.++...|+.++
T Consensus       135 ~~~e~~~~~~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~  214 (321)
T 3c1o_A          135 RIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVI  214 (321)
T ss_dssp             HHHHHHHHHHTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEE
T ss_pred             HHHHHHHHHcCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEE
Confidence            99999999999999999999999987653322111112344577788889999999999999999999998766788999


Q ss_pred             EcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhhheeeeeEEEecCCccccCCCCCcccccccCC
Q 025054          164 LRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYP  243 (258)
Q Consensus       164 l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~  243 (258)
                      +.|+++.+|++|+++.+++.+|+++++..+|.+++.+.+...++|++..+..++.++..|....+...+. ..+.++++|
T Consensus       215 ~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  293 (321)
T 3c1o_A          215 YRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEMRKD-DIEASNLYP  293 (321)
T ss_dssp             CCCGGGEEEHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHHSCTTTHHHHHHHHHHHTTCTTTSSCCCSS-CEEGGGTCT
T ss_pred             EeCCCCcccHHHHHHHHHHHcCCcceeeeCCHHHHHHHHhcCCCchhhhHhhhheeeeccccCCCCCCcc-cchHhhhCC
Confidence            9876679999999999999999999999999999998888778877664444555555554333444432 234568889


Q ss_pred             CCcccCHHHHHhhh
Q 025054          244 DVDYATVEEYLDQF  257 (258)
Q Consensus       244 ~~~~~s~ee~l~~~  257 (258)
                      +++++||+||++++
T Consensus       294 ~~~~~t~~~~l~~~  307 (321)
T 3c1o_A          294 ELEFTSIDGLLDLF  307 (321)
T ss_dssp             TCCCCCHHHHHHHH
T ss_pred             CCccccHHHHHHHH
Confidence            99999999999875

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.96  E-value=7.1e-30  Score=209.57  Aligned_cols=232  Identities=19%  Similarity=0.224  Sum_probs=176.1

Q ss_pred             ccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-----hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCC
Q 025054            3 YMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-----VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPA   76 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-----~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~   76 (258)
                      ...+++++.+|++|++++.++++++|+|||+++...     +..+++++++|+++| ++|||+ |+++.....      .
T Consensus        42 ~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~~~~~------~  114 (289)
T 3e48_A           42 WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQHNN------P  114 (289)
T ss_dssp             GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTT-CCEEEEEEESCCSTTC------C
T ss_pred             hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcC-CCEEEEEcccCCCCCC------C
Confidence            457899999999999999999999999999998642     678899999999999 999999 887653321      1


Q ss_pred             ccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054           77 KSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus        77 ~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      ..+...+..+|+.+++++++|+++|||+|++++...+...     ..+.....+.|+.++++++++|+|++++.++.++.
T Consensus       115 ~~~~~~~~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~  189 (289)
T 3e48_A          115 FHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPEL-----MNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPD  189 (289)
T ss_dssp             STTHHHHHHHHHHHHHHCCEEEEEEECEESTTHHHHHHHH-----HHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGG
T ss_pred             CccchhHHHHHHHHHHcCCCEEEEeccccccccHHHHHHH-----HHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCC
Confidence            1233345678899999999999999999999865432110     11123345667899999999999999999999886


Q ss_pred             CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHh-ccCcchhhheeeeeEEEecCCccccCCCCCc
Q 025054          157 TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQD-ASNEDKIMLVVNFSIFMKGEQTNFEIDPSSG  235 (258)
Q Consensus       157 ~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~  235 (258)
                      ..++.|+++ + +.+|+.|+++.+.+.+|+++++..++.+++.+.+.. .+++..+.  .++.....|...   ...   
T Consensus       190 ~~g~~~~~~-~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~~~~g~~~---~~~---  259 (289)
T 3e48_A          190 TWGKRYLLS-G-YSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLA--SMYHAGARGLLD---QES---  259 (289)
T ss_dssp             GTTCEEEEC-C-EEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHH--HHHHHHHTTTTC---CCC---
T ss_pred             cCCceEEeC-C-CcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHH--HHHHHHHCCCcc---ccC---
Confidence            568999999 4 599999999999999999999999999999888765 44433221  112222344321   111   


Q ss_pred             ccccccCCCCcccCHHHHHhhh
Q 025054          236 VEASELYPDVDYATVEEYLDQF  257 (258)
Q Consensus       236 ~~~~~~~~~~~~~s~ee~l~~~  257 (258)
                      ... +.+.|++|+||+||++++
T Consensus       260 ~~~-~~~~G~~p~~~~~~~~~~  280 (289)
T 3e48_A          260 NDF-KQLVNDQPQTLQSFLQEN  280 (289)
T ss_dssp             SHH-HHHHSSCCCCHHHHHHC-
T ss_pred             chH-HHHhCCCCCCHHHHHHHH
Confidence            233 444599999999999875

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=1.2e-28  Score=203.28  Aligned_cols=233  Identities=15%  Similarity=0.160  Sum_probs=170.9

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCC
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEP   75 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~   75 (258)
                      ..|++++.+|++|++++.++++++|+|||+++...       +...++++++|+++| ++|||+ |+.+......  ..+
T Consensus        50 ~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~~--~~~  126 (299)
T 2wm3_A           50 LQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLTA--GRL  126 (299)
T ss_dssp             HTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHTT--TSC
T ss_pred             HCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccCC--Ccc
Confidence            45899999999999999999999999999987421       567899999999999 999999 5544321111  113


Q ss_pred             CccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCC-c-eEeccCCCceeeeeccchHHHHHHHHhc
Q 025054           76 AKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE-N-ILFYGDGQPKAIFNKEEDIATYTIKAVD  153 (258)
Q Consensus        76 ~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~g~~~~~~v~~~D~a~~~~~~l~  153 (258)
                      ..+|+.+|..+|+++++++++|++|||++||+++...+...   ....+ . ....+.++.++++++++|+|++++.++.
T Consensus       127 ~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  203 (299)
T 2wm3_A          127 AAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQ---KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLK  203 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCEEEEECCEEGGGGGTTTCCE---ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHH
T ss_pred             cCchhhHHHHHHHHHHHCCCCEEEEeecHHhhhchhhcCCc---ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHc
Confidence            46788999999999999999999999999999876532110   01122 1 1222346788999999999999999998


Q ss_pred             CC-CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhhheeeeeEEEecCCccccCCC
Q 025054          154 DP-RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDP  232 (258)
Q Consensus       154 ~~-~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~  232 (258)
                      ++ ...|+.|+++|  +.+|+.|+++.+.+.+|+++++..+|.+++.+    .++|....+..+..++..|..     .+
T Consensus       204 ~~~~~~g~~~~~~g--~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~-----~~  272 (299)
T 2wm3_A          204 MPEKYVGQNIGLST--CRHTAEEYAALLTKHTRKVVHDAKMTPEDYEK----LGFPGARDLANMFRFYALRPD-----RD  272 (299)
T ss_dssp             SHHHHTTCEEECCS--EEECHHHHHHHHHHHHSSCEEECCCCTHHHHT----TCSTTHHHHHHHHHHHTTCCC-----CC
T ss_pred             ChhhhCCeEEEeee--ccCCHHHHHHHHHHHHCCCceeEecCHHHHHh----cCCCcHHHHHHHHHHHHhcCC-----CC
Confidence            75 34688999986  47999999999999999999999999887764    355541111111122223321     11


Q ss_pred             CCcccccccCCCCcccCHHHHHhhh
Q 025054          233 SSGVEASELYPDVDYATVEEYLDQF  257 (258)
Q Consensus       233 ~~~~~~~~~~~~~~~~s~ee~l~~~  257 (258)
                         ....+. .|.+|+||+||++++
T Consensus       273 ---~~~~~~-~g~~~~~~~~~~~~~  293 (299)
T 2wm3_A          273 ---IELTLR-LNPKALTLDQWLEQH  293 (299)
T ss_dssp             ---HHHHHH-HCTTCCCHHHHHHHH
T ss_pred             ---HHHHHH-hCCCCCCHHHHHHhC
Confidence               223333 488999999999875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.95  E-value=1.9e-27  Score=194.73  Aligned_cols=232  Identities=17%  Similarity=0.184  Sum_probs=172.6

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCcc-----chhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCcc
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRT-----EVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKS   78 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~-----~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~   78 (258)
                      .+++++.+|++|++++.++++++|+|||+++..     ++.++++++++|+++| ++|||+ |+.+...       ...+
T Consensus        45 ~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~-------~~~~  116 (287)
T 2jl1_A           45 QGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFAEE-------SIIP  116 (287)
T ss_dssp             TTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTT-CSEEEEEEETTGGG-------CCST
T ss_pred             cCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC-------CCCc
Confidence            578999999999999999999999999999853     4678899999999999 999999 7665431       1346


Q ss_pred             chhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCC
Q 025054           79 GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTL  158 (258)
Q Consensus        79 ~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~  158 (258)
                      |..+|..+|+++++.+++++++||+.+++++...+..   .....+... .+.++..+++++++|+|++++.++.++...
T Consensus       117 y~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  192 (287)
T 2jl1_A          117 LAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLR---ASTESGAIV-TNAGSGIVNSVTRNELALAAATVLTEEGHE  192 (287)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCBHHHHSSGGGH---HHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCT
T ss_pred             hHHHHHHHHHHHHHcCCCeEEEECCEeccccchhhHH---HHhhCCcee-ccCCCCccCccCHHHHHHHHHHHhcCCCCC
Confidence            8889999999999999999999999999876322110   001112232 455678899999999999999999887557


Q ss_pred             CceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhh--heeeeeEEEecCCccccCCCCCcc
Q 025054          159 NKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIM--LVVNFSIFMKGEQTNFEIDPSSGV  236 (258)
Q Consensus       159 ~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~~~~~  236 (258)
                      ++.|+++|+ +.+|++|+++.+.+.+|.++++..+|.+++...+...++|....  +..+......+.   +..+.   .
T Consensus       193 g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~  265 (287)
T 2jl1_A          193 NKTYNLVSN-QPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGE---ASKTS---D  265 (287)
T ss_dssp             TEEEEECCS-SCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTT---TCCCC---S
T ss_pred             CcEEEecCC-CcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCC---CcCCc---h
Confidence            889999974 58999999999999999999999999887766555445554331  110111111122   11121   2


Q ss_pred             cccccCCCCcccCHHHHHhhh
Q 025054          237 EASELYPDVDYATVEEYLDQF  257 (258)
Q Consensus       237 ~~~~~~~~~~~~s~ee~l~~~  257 (258)
                      ...+.+ | +++|++|+|++.
T Consensus       266 ~~~~~l-G-~~~~l~e~l~~~  284 (287)
T 2jl1_A          266 DLQKLI-G-SLTPLKETVKQA  284 (287)
T ss_dssp             HHHHHH-S-SCCCHHHHHHHH
T ss_pred             HHHHHh-C-CCCCHHHHHHHH
Confidence            334444 7 999999999875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.95  E-value=2.2e-27  Score=194.19  Aligned_cols=233  Identities=15%  Similarity=0.152  Sum_probs=171.0

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCcc---chhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccch
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRT---EVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGY   80 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~---~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~   80 (258)
                      .+++++.+|++|++++.++++++|+|||+++..   ++..+++++++|+++| ++|||+ |+.+...       ...+|.
T Consensus        44 ~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~-------~~~~y~  115 (286)
T 2zcu_A           44 QGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHADT-------SPLGLA  115 (286)
T ss_dssp             TTCEEEECCTTCHHHHHHHTTTCSEEEECC--------CHHHHHHHHHHHHT-CCEEEEEEETTTTT-------CCSTTH
T ss_pred             CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC-------CcchhH
Confidence            478899999999999999999999999999853   3678999999999999 999999 7665541       134788


Q ss_pred             hhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCc
Q 025054           81 ARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNK  160 (258)
Q Consensus        81 ~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~  160 (258)
                      .+|..+|+++++.+++++++||+++++++...+...    ...+.+. .++++..+++++++|+|++++.++.++...++
T Consensus       116 ~sK~~~e~~~~~~~~~~~ilrp~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~  190 (286)
T 2zcu_A          116 DEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAA----LEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGK  190 (286)
T ss_dssp             HHHHHHHHHHHHHCSEEEEEEECCBHHHHHTTHHHH----HHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTC
T ss_pred             HHHHHHHHHHHHcCCCeEEEeChHHhhhhHHHhHHh----hcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCc
Confidence            899999999999999999999999888654321110    1122333 45678889999999999999999988755788


Q ss_pred             eEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhh--heeeeeEEEecCCccccCCCCCcccc
Q 025054          161 TLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIM--LVVNFSIFMKGEQTNFEIDPSSGVEA  238 (258)
Q Consensus       161 ~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~~~~~~~  238 (258)
                      .|+++|+ +.+|++|+++.+.+.+|+++++..+|.+++...+...++|....  +..+......+.   +..+.   ...
T Consensus       191 ~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~  263 (286)
T 2zcu_A          191 VYELAGD-SAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGG---LFDDS---KTL  263 (286)
T ss_dssp             EEEECCS-SCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTT---TCCCC---CHH
T ss_pred             eEEEeCC-CcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCC---CccCc---hHH
Confidence            9999974 58999999999999999999999999887766554445554321  110111111221   11111   133


Q ss_pred             cccCCCCcccCHHHHHhhhC
Q 025054          239 SELYPDVDYATVEEYLDQFV  258 (258)
Q Consensus       239 ~~~~~~~~~~s~ee~l~~~~  258 (258)
                      .+.+ |+++++++|+|++.+
T Consensus       264 ~~~l-g~~~~~~~e~l~~~~  282 (286)
T 2zcu_A          264 SKLI-GHPTTTLAESVSHLF  282 (286)
T ss_dssp             HHHH-TSCCCCHHHHHHGGG
T ss_pred             HHHh-CcCCCCHHHHHHHHH
Confidence            3444 689999999998753

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.92  E-value=1.5e-24  Score=179.69  Aligned_cols=186  Identities=14%  Similarity=0.083  Sum_probs=147.2

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-----------hhchHHHHHHHHHhCCccEEEc-CCC---CCCC---
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSNV---   67 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~~---   67 (258)
                      +++++.+|++ .+++.++++++|+|||+++...           +.++++++++|++++ ++|||+ |+.   +...   
T Consensus        43 ~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~  120 (311)
T 3m2p_A           43 DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLP  120 (311)
T ss_dssp             CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCS
T ss_pred             ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCC
Confidence            7889999999 9999999999999999998531           677899999999999 999998 653   2211   


Q ss_pred             -CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCC---CCCCCCCCCCCceEeccCCCceeeee
Q 025054           68 -DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTM---AQPGATAPPRENILFYGDGQPKAIFN  139 (258)
Q Consensus        68 -~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~g~~~~~~v  139 (258)
                       .+..+..|..+|..+|..+|+++++    .+++++++||+.+||+.....   ..+.........+.++|++++.++++
T Consensus       121 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v  200 (311)
T 3m2p_A          121 WNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFL  200 (311)
T ss_dssp             BCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEE
T ss_pred             CCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceE
Confidence             1222334567788899999999876    799999999999999754311   00000012234577788899999999


Q ss_pred             ccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054          140 KEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE  195 (258)
Q Consensus       140 ~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~  195 (258)
                      +++|+|++++.+++.+. .++.|+++++ +.+|+.|+++.+.+.+|.+.++...+.
T Consensus       201 ~v~Dva~a~~~~~~~~~-~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~  254 (311)
T 3m2p_A          201 YAKDAAKSVIYALKQEK-VSGTFNIGSG-DALTNYEVANTINNAFGNKDNLLVKNP  254 (311)
T ss_dssp             EHHHHHHHHHHHTTCTT-CCEEEEECCS-CEECHHHHHHHHHHHTTCTTCEEECSS
T ss_pred             EHHHHHHHHHHHHhcCC-CCCeEEeCCC-CcccHHHHHHHHHHHhCCCCcceecCC
Confidence            99999999999998876 7899999974 599999999999999999887776654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.90  E-value=3.1e-23  Score=174.50  Aligned_cols=182  Identities=13%  Similarity=0.113  Sum_probs=143.5

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---CC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GS   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~   65 (258)
                      .+++++.+|++|.+++.++++++|+|||+++...               +.++.+++++|++++ +++||+ |+.   +.
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~  157 (351)
T 3ruf_A           79 SRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGD  157 (351)
T ss_dssp             TTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTT
T ss_pred             CceEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCC
Confidence            6799999999999999999999999999998521               667889999999999 999998 653   22


Q ss_pred             CC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCC-C------CCCCCCceEecc
Q 025054           66 NV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPG-A------TAPPRENILFYG  130 (258)
Q Consensus        66 ~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~g  130 (258)
                      ..    .+..+..|..+|..+|..+|++++.    .+++++++||+.+||+......... .      .......+.++|
T Consensus       158 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  237 (351)
T 3ruf_A          158 HPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYING  237 (351)
T ss_dssp             CCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEES
T ss_pred             CCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeC
Confidence            11    1122234566788899999998875    5899999999999997643211100 0      011234567789


Q ss_pred             CCCceeeeeccchHHHHHHHHhcC-CCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDD-PRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~-~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      +|++.+++|+++|+|++++.++.. +...++.|+++++ +.+|+.|+++.+.+.+|.+.
T Consensus       238 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~  295 (351)
T 3ruf_A          238 DGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVG-DRTTLNELSGYIYDELNLIH  295 (351)
T ss_dssp             SSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHTTC
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCC-CcccHHHHHHHHHHHhCccc
Confidence            999999999999999999999887 4557899999974 59999999999999999843

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.90  E-value=1e-23  Score=177.03  Aligned_cols=182  Identities=19%  Similarity=0.242  Sum_probs=143.3

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---C
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---Y   63 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~   63 (258)
                      .+++++.+|++|.+++.+++++  +|+|||+++...               +.++.+++++|++++ +++||+ |+   |
T Consensus        75 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy  153 (346)
T 4egb_A           75 PNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVY  153 (346)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGG
T ss_pred             CCeEEEEcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHh
Confidence            5799999999999999999997  999999998532               567899999999999 999998 65   3


Q ss_pred             CCC-----CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC---CCCCCCCCCceEeccC
Q 025054           64 GSN-----VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ---PGATAPPRENILFYGD  131 (258)
Q Consensus        64 ~~~-----~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~  131 (258)
                      +..     ..+..+..|..+|..+|..+|+++++    .+++++++||+.+||+.......   +.........+.++|+
T Consensus       154 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (346)
T 4egb_A          154 GSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGD  233 (346)
T ss_dssp             CCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETT
T ss_pred             CCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCC
Confidence            322     11222334567788899999999876    59999999999999975421000   0000122345777889


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE  189 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~  189 (258)
                      |++.+++|+++|+|++++.++..+. .+++|+++++ +.+|+.|+++.+.+.+|.+.+
T Consensus       234 ~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~  289 (346)
T 4egb_A          234 GLNVRDWLHVTDHCSAIDVVLHKGR-VGEVYNIGGN-NEKTNVEVVEQIITLLGKTKK  289 (346)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCC-TTCEEEECCS-CCEEHHHHHHHHHHHHTCCGG
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhcCC-CCCEEEECCC-CceeHHHHHHHHHHHhCCCcc
Confidence            9999999999999999999998775 7889999984 589999999999999998654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.89  E-value=6.6e-23  Score=171.76  Aligned_cols=186  Identities=13%  Similarity=0.095  Sum_probs=139.1

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCC---CC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS---NV   67 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~---~~   67 (258)
                      .+++++.+|++|.+++.++++++|+|||+++...             +.++.+++++|+++| ++|||+ |+.+.   ..
T Consensus        56 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~  134 (342)
T 2x4g_A           56 LEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHP  134 (342)
T ss_dssp             GCCEEEECCTTCHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCT
T ss_pred             CCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCC
Confidence            4789999999999999999999999999997421             567899999999999 999998 66432   11


Q ss_pred             -----CCCCCCCC----CccchhhHHHHHHHHHh---CCCCeEEEecCcccccCc-CC-CCCCCCCCCCCCceEeccCCC
Q 025054           68 -----DAGHPIEP----AKSGYARKAKIRRAIEA---EGIPHTYVSCNCSFGFFL-PT-MAQPGATAPPRENILFYGDGQ  133 (258)
Q Consensus        68 -----~~~~~~~~----~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~g~  133 (258)
                           ++..+..|    ..+|..+|..+|+++++   .+++++++||+.+||+.. .. +..............+   ++
T Consensus       135 ~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~  211 (342)
T 2x4g_A          135 QGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY---VA  211 (342)
T ss_dssp             TSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE---EC
T ss_pred             CCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc---cC
Confidence                 11222233    55677899999999876   489999999999999764 21 1000000011112233   46


Q ss_pred             ceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054          134 PKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI  198 (258)
Q Consensus       134 ~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~  198 (258)
                      +.+++++++|+|++++.+++++.. ++.|++++ ++ +|+.|+++.+.+.+|.+.++ .+|...+
T Consensus       212 ~~~~~i~v~Dva~~~~~~~~~~~~-g~~~~v~~-~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~  272 (342)
T 2x4g_A          212 GQRNVIDAAEAGRGLLMALERGRI-GERYLLTG-HN-LEMADLTRRIAELLGQPAPQ-PMSMAMA  272 (342)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHSCT-TCEEEECC-EE-EEHHHHHHHHHHHHTCCCCE-EECHHHH
T ss_pred             CCcceeeHHHHHHHHHHHHhCCCC-CceEEEcC-Cc-ccHHHHHHHHHHHhCCCCCC-cCCHHHH
Confidence            789999999999999999987653 88999997 45 99999999999999998888 8887654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.88  E-value=1.3e-22  Score=170.42  Aligned_cols=188  Identities=19%  Similarity=0.195  Sum_probs=145.6

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CC---CCCC-
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSN-   66 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~-   66 (258)
                      .+++++.+|++|.+++.++++++|+|||+++...             +.++.+++++|++++ +++||+ |+   |+.. 
T Consensus        56 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~  134 (347)
T 4id9_A           56 TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENR  134 (347)
T ss_dssp             SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTS
T ss_pred             CCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCC
Confidence            4688899999999999999999999999998532             567899999999999 999998 65   3321 


Q ss_pred             -----CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCccc-------------ccCcCC------------
Q 025054           67 -----VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSF-------------GFFLPT------------  112 (258)
Q Consensus        67 -----~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~-------------~~~~~~------------  112 (258)
                           ..+..+..+..+|..+|..+|+++++    .+++++++||+.+|             |+....            
T Consensus       135 ~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~  214 (347)
T 4id9_A          135 PEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGN  214 (347)
T ss_dssp             CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTC
T ss_pred             CCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccch
Confidence                 11222334566788899999999864    68999999999999             533110            


Q ss_pred             --CCCCCCCCCCCCceEeccCCCceeee----eccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          113 --MAQPGATAPPRENILFYGDGQPKAIF----NKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       113 --~~~~~~~~~~~~~~~~~g~g~~~~~~----v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                        +..+.........+.++|++++.+++    ++++|+|++++.++..+...++.|+++++ +.+|+.|+++.+.+.+|.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~  293 (347)
T 4id9_A          215 AAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGAD-EPADFAALLPKIAALTGL  293 (347)
T ss_dssp             HHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCS-SCEEHHHHHHHHHHHHCC
T ss_pred             hHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCC-CcccHHHHHHHHHHHhCC
Confidence              00000001223456778888888888    99999999999999988557899999984 589999999999999999


Q ss_pred             cceeEecC
Q 025054          187 TLEKIYVT  194 (258)
Q Consensus       187 ~~~~~~~~  194 (258)
                      +.++..+|
T Consensus       294 ~~~~~~~p  301 (347)
T 4id9_A          294 PIVTVDFP  301 (347)
T ss_dssp             CEEEEECS
T ss_pred             CCceeeCC
Confidence            88776654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.88  E-value=3.4e-21  Score=162.13  Aligned_cols=184  Identities=14%  Similarity=0.106  Sum_probs=142.9

Q ss_pred             CceeEEecc-CCCHHHHHHhhCCCcEEEEccCccc---hhchHHHHHHHHHhCCccEEEc-CCCCC-CCCCCCCCCCCcc
Q 025054            5 INCLIAQGD-LHDHESLVKAIKPVDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFP-TEYGS-NVDAGHPIEPAKS   78 (258)
Q Consensus         5 ~gv~~~~~D-~~d~~~l~~al~g~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~-S~~~~-~~~~~~~~~~~~~   78 (258)
                      .+++++.+| ++|++++.++++++|+|||+++...   ....++++++|+++|+++|||+ |+.+. ....    .+..+
T Consensus        51 ~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~----~~~~~  126 (352)
T 1xgk_A           51 PNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP----WPAVP  126 (352)
T ss_dssp             TTEEEEESCCTTCHHHHHHHHTTCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS----CCCCT
T ss_pred             CCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC----CCCcc
Confidence            378999999 9999999999999999999887541   3345999999999865899999 66542 1111    23567


Q ss_pred             chhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCC-CCCCCCCce--EeccCCCceeeeecc-chHHHHHHHHhcC
Q 025054           79 GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPG-ATAPPRENI--LFYGDGQPKAIFNKE-EDIATYTIKAVDD  154 (258)
Q Consensus        79 ~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~g~g~~~~~~v~~-~D~a~~~~~~l~~  154 (258)
                      |+.+|..+|+++++.++++++|||++|..++...+.... ......+.+  .++++++++++++++ +|+|++++.++.+
T Consensus       127 y~~sK~~~E~~~~~~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~  206 (352)
T 1xgk_A          127 MWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKD  206 (352)
T ss_dssp             TTHHHHHHHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhC
Confidence            889999999999999999999999976554432211110 000123333  457778899999999 8999999999987


Q ss_pred             CC--CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          155 PR--TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       155 ~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      +.  ..++.|++++  +.+|+.|+++.+.+.+|++.++..+|
T Consensus       207 ~~~~~~g~~~~l~~--~~~s~~e~~~~i~~~~G~~~~~~~vp  246 (352)
T 1xgk_A          207 GPQKWNGHRIALTF--ETLSPVQVCAAFSRALNRRVTYVQVP  246 (352)
T ss_dssp             CHHHHTTCEEEECS--EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred             CchhhCCeEEEEec--CCCCHHHHHHHHHHHHCCCCceEECC
Confidence            52  3689999994  48999999999999999999988888

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.88  E-value=2.8e-22  Score=165.88  Aligned_cols=187  Identities=18%  Similarity=0.097  Sum_probs=141.2

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc----------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN   66 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~   66 (258)
                      +++++.+|++|++++.+++++  +|+|||+++...                +.++.+++++|++++ ++|||+ |+.+..
T Consensus        39 ~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vy  117 (319)
T 4b8w_A           39 FVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIF  117 (319)
T ss_dssp             ECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS
T ss_pred             ccCceecccCCHHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhc
Confidence            455568999999999999987  999999997531                567889999999999 999998 764321


Q ss_pred             CCC-------CC----CCCCCc-cchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCC-----CC------
Q 025054           67 VDA-------GH----PIEPAK-SGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPG-----AT------  119 (258)
Q Consensus        67 ~~~-------~~----~~~~~~-~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~-----~~------  119 (258)
                      ...       ..    +..|.. +|..+|..+|++++.    .+++++++||+.+||+.........     +.      
T Consensus       118 g~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  197 (319)
T 4b8w_A          118 PDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLA  197 (319)
T ss_dssp             CSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHH
Confidence            110       00    112223 466799999998865    6899999999999997643210000     00      


Q ss_pred             CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       120 ~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      ......+.++|+|++.+++|+++|+|++++.++..+. ..++.|++++ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus       198 ~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~  272 (319)
T 4b8w_A          198 KSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGE-EDEVSIKEAAEAVVEAMDFHGEVTFDT  272 (319)
T ss_dssp             HHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCG-GGCEEHHHHHHHHHHHTTCCSCEEEET
T ss_pred             hccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecC-CCceeHHHHHHHHHHHhCCCCcEEeCC
Confidence            0123457788999999999999999999999998753 4577899987 469999999999999999887776554

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.87  E-value=2.5e-22  Score=166.22  Aligned_cols=189  Identities=17%  Similarity=0.115  Sum_probs=140.6

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---C
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---G   64 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~   64 (258)
                      ..+++++.+|+.|.+ +.+++++ |+|||+++...               +.++.+++++|++++ +++||+ |+.   +
T Consensus        42 ~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg  118 (312)
T 3ko8_A           42 NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYG  118 (312)
T ss_dssp             CTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC
T ss_pred             CCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhC
Confidence            357889999999998 9999998 99999998421               567889999999999 999998 653   2


Q ss_pred             CCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC--CCC-CCCCCCCceEeccCCC
Q 025054           65 SNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA--QPG-ATAPPRENILFYGDGQ  133 (258)
Q Consensus        65 ~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~g~g~  133 (258)
                      ...    .+..+..|..+|..+|..+|++++.    .+++++++||+.+||+......  .+. ........+.++++|+
T Consensus       119 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  198 (312)
T 3ko8_A          119 DADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGT  198 (312)
T ss_dssp             SCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----
T ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCC
Confidence            211    1123344567788899999998875    5899999999999997543200  000 0001123566788899


Q ss_pred             ceeeeeccchHHHHHHHHhcC---CCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHH
Q 025054          134 PKAIFNKEEDIATYTIKAVDD---PRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTED  196 (258)
Q Consensus       134 ~~~~~v~~~D~a~~~~~~l~~---~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~  196 (258)
                      +.++++|++|+|++++.+++.   +...++.|+++++ +.+|+.|+++.+.+.+|.+.++..++..
T Consensus       199 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~  263 (312)
T 3ko8_A          199 QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNV-DAVRVLDIAQIVAEVLGLRPEIRLVPST  263 (312)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCS-SCEEHHHHHHHHHHHHTCCCEEEEC---
T ss_pred             eEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCC-CceeHHHHHHHHHHHhCCCCceeecCcc
Confidence            999999999999999999987   4456889999974 6999999999999999998888777653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.87  E-value=2.5e-21  Score=158.32  Aligned_cols=174  Identities=10%  Similarity=-0.007  Sum_probs=136.2

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--hhchHHHHHHHHH--hCCccEEEc-CCC---CCCC----CCCC
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIKE--VGNIKRFFP-TEY---GSNV----DAGH   71 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~~--~g~vk~~v~-S~~---~~~~----~~~~   71 (258)
                      ..+++++.+|++|.+     ++++|+|||+++...  ....++++++|++  .+ ++|||+ |+.   +...    .+..
T Consensus        46 ~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~  119 (286)
T 3ius_A           46 ASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETT  119 (286)
T ss_dssp             HTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTS
T ss_pred             hCCCeEEEecccccc-----cCCCCEEEECCCccccccHHHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCC
Confidence            467899999999854     889999999998653  3456899999999  67 999998 653   2221    1222


Q ss_pred             CCCCCccchhhHHHHHHHHHhC-CCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHH
Q 025054           72 PIEPAKSGYARKAKIRRAIEAE-GIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIK  150 (258)
Q Consensus        72 ~~~~~~~~~~~k~~~e~~l~~~-~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~  150 (258)
                      +..|.++|..+|..+|+++++. +++++++||+.+||+....+...    ..+....+.++ ++.+++||++|+|++++.
T Consensus       120 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~----~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~  194 (286)
T 3ius_A          120 PLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSKL----GKGGIRRIIKP-GQVFSRIHVEDIAQVLAA  194 (286)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSSTTS----SSSCCCEEECT-TCCBCEEEHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeccceECCCchHHHHH----hcCCccccCCC-CcccceEEHHHHHHHHHH
Confidence            3345667888999999999997 99999999999999865443221    12233455554 578999999999999999


Q ss_pred             HhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCccee
Q 025054          151 AVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEK  190 (258)
Q Consensus       151 ~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~  190 (258)
                      +++++. .++.|+++++ +.+|+.|+++.+.+.+|.+.+.
T Consensus       195 ~~~~~~-~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~  232 (286)
T 3ius_A          195 SMARPD-PGAVYNVCDD-EPVPPQDVIAYAAELQGLPLPP  232 (286)
T ss_dssp             HHHSCC-TTCEEEECCS-CCBCHHHHHHHHHHHHTCCCCC
T ss_pred             HHhCCC-CCCEEEEeCC-CCccHHHHHHHHHHHcCCCCCc
Confidence            999875 6789999974 5899999999999999987653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.87  E-value=7.6e-23  Score=173.43  Aligned_cols=185  Identities=19%  Similarity=0.216  Sum_probs=143.2

Q ss_pred             CceeEEeccCC-CHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---C
Q 025054            5 INCLIAQGDLH-DHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---G   64 (258)
Q Consensus         5 ~gv~~~~~D~~-d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~   64 (258)
                      .+++++.+|++ |.+++.++++++|+|||+++...               +.++.+++++|++++  +|||+ |+.   +
T Consensus        69 ~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg  146 (372)
T 3slg_A           69 ERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYG  146 (372)
T ss_dssp             TTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGB
T ss_pred             CCeEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhC
Confidence            68999999999 99999999999999999998532               567799999999998  78998 663   2


Q ss_pred             CCCC----CCCCC-------CCCccchhhHHHHHHHHHhC---CCCeEEEecCcccccCcCCCCCC----C-C------C
Q 025054           65 SNVD----AGHPI-------EPAKSGYARKAKIRRAIEAE---GIPHTYVSCNCSFGFFLPTMAQP----G-A------T  119 (258)
Q Consensus        65 ~~~~----~~~~~-------~~~~~~~~~k~~~e~~l~~~---~~~~t~lr~~~~~~~~~~~~~~~----~-~------~  119 (258)
                      ....    +....       .|..+|..+|..+|+++++.   +++++++||+.+||+.......+    . .      .
T Consensus       147 ~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  226 (372)
T 3slg_A          147 MCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGH  226 (372)
T ss_dssp             SCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHH
T ss_pred             CCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHH
Confidence            2111    11100       23346778999999999875   89999999999999764321100    0 0      0


Q ss_pred             CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       120 ~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      ......+.++++|++.+++|+++|+|++++.+++.+.  ..+++|+++++++.+|+.|+++.+.+.+|.+.++.
T Consensus       227 ~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~  300 (372)
T 3slg_A          227 IVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYA  300 (372)
T ss_dssp             HHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTH
T ss_pred             HHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccc
Confidence            0123457788888999999999999999999999874  57899999975469999999999999999765543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.87  E-value=1.2e-21  Score=165.54  Aligned_cols=185  Identities=12%  Similarity=0.152  Sum_probs=142.1

Q ss_pred             CceeEEeccCCCHHHHHHh-hCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CC---CCCC
Q 025054            5 INCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSN   66 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~   66 (258)
                      .+++++.+|++|++++.++ +.++|+|||+++...             +.++.+++++|++.+ ++ ||+ |+   ++..
T Consensus        68 ~~~~~~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~  145 (362)
T 3sxp_A           68 FKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNT  145 (362)
T ss_dssp             CCSEEEECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSC
T ss_pred             cCceEEECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCC
Confidence            4578999999999999999 889999999998532             578899999999999 88 887 65   3322


Q ss_pred             C---CCCCCCCCCccchhhHHHHHHHHHhCC--CCeEEEecCcccccCcCCCCCC-C----C--CCCCCCceEeccCCCc
Q 025054           67 V---DAGHPIEPAKSGYARKAKIRRAIEAEG--IPHTYVSCNCSFGFFLPTMAQP-G----A--TAPPRENILFYGDGQP  134 (258)
Q Consensus        67 ~---~~~~~~~~~~~~~~~k~~~e~~l~~~~--~~~t~lr~~~~~~~~~~~~~~~-~----~--~~~~~~~~~~~g~g~~  134 (258)
                      .   .+..+..|.++|..+|..+|++++...  +++++|||+.+||+........ .    +  .......+.++++|++
T Consensus       146 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  225 (362)
T 3sxp_A          146 KAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQ  225 (362)
T ss_dssp             CSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCC
T ss_pred             CCCCCCCCCCCCCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCe
Confidence            1   112233456678889999999999854  8999999999999764321000 0    0  0122345667788889


Q ss_pred             eeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054          135 KAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE  195 (258)
Q Consensus       135 ~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~  195 (258)
                      .+++++++|+|++++.+++.+. .| .|+++++ +.+|+.|+++.+.+.+| +.++...+.
T Consensus       226 ~~~~i~v~Dva~ai~~~~~~~~-~g-~~~i~~~-~~~s~~e~~~~i~~~~g-~~~~~~~~~  282 (362)
T 3sxp_A          226 LRDFVYIEDVIQANVKAMKAQK-SG-VYNVGYS-QARSYNEIVSILKEHLG-DFKVTYIKN  282 (362)
T ss_dssp             EEECEEHHHHHHHHHHHTTCSS-CE-EEEESCS-CEEEHHHHHHHHHHHHC-CCEEECCC-
T ss_pred             EEccEEHHHHHHHHHHHHhcCC-CC-EEEeCCC-CCccHHHHHHHHHHHcC-CCceEECCC
Confidence            9999999999999999998774 45 9999874 59999999999999999 777776664

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.86  E-value=3.9e-22  Score=163.15  Aligned_cols=177  Identities=12%  Similarity=0.118  Sum_probs=140.1

Q ss_pred             CceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc----------hhchHHHHHHHHHhCCccEEEc-CCC---CCCC--
Q 025054            5 INCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE----------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSNV--   67 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~----------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~~--   67 (258)
                      .+++++.+|++|.+++.+++++ +|+|||+++...          +.++.+++++|++.+ +++||+ |+.   +...  
T Consensus        41 ~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~  119 (286)
T 3gpi_A           41 AGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEE  119 (286)
T ss_dssp             TTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSS
T ss_pred             cCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCC
Confidence            5789999999999999999998 999999997532          678999999999998 999998 653   3221  


Q ss_pred             --CCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHH
Q 025054           68 --DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIA  145 (258)
Q Consensus        68 --~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a  145 (258)
                        .+..+..|..+|..+|..+|++ ++. ++++++||+.+||+....+...   ...  . ..+++++..+++++++|+|
T Consensus       120 ~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~~ilR~~~v~G~~~~~~~~~---~~~--~-~~~~~~~~~~~~i~v~Dva  191 (286)
T 3gpi_A          120 WLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSSTILRFSGIYGPGRLRMIRQ---AQT--P-EQWPARNAWTNRIHRDDGA  191 (286)
T ss_dssp             EECTTSCCCCCSHHHHHHHHHHHH-GGG-SSEEEEEECEEEBTTBCHHHHH---TTC--G-GGSCSSBCEECEEEHHHHH
T ss_pred             CCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCeEEEecccccCCCchhHHHH---HHh--c-ccCCCcCceeEEEEHHHHH
Confidence              1222334566778899999999 777 9999999999999765422110   011  1 2246788899999999999


Q ss_pred             HHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          146 TYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       146 ~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      ++++.+++++  ...++.|++++ ++.+|+.|+++.+.+.+|.+.++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~  238 (286)
T 3gpi_A          192 AFIAYLIQQRSHAVPERLYIVTD-NQPLPVHDLLRWLADRQGIAYPAG  238 (286)
T ss_dssp             HHHHHHHHHHTTSCCCSEEEECC-SCCEEHHHHHHHHHHHTTCCCCCS
T ss_pred             HHHHHHHhhhccCCCCceEEEeC-CCCCCHHHHHHHHHHHcCCCCCCC
Confidence            9999999875  45789999997 458999999999999999876554

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.86  E-value=4.4e-21  Score=158.84  Aligned_cols=186  Identities=12%  Similarity=0.116  Sum_probs=143.2

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC---
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS---   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~---   65 (258)
                      .+++++.+|++| +++.++++++|+|||+++...               +.++.+++++|++++ +++||+ |+.+.   
T Consensus        43 ~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~  120 (313)
T 3ehe_A           43 EAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGE  120 (313)
T ss_dssp             TTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCS
T ss_pred             CCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCc
Confidence            568899999999 999999999999999998421               567889999999999 999998 66332   


Q ss_pred             CC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC--CCCC-CCCCCCceEeccCCCc
Q 025054           66 NV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA--QPGA-TAPPRENILFYGDGQP  134 (258)
Q Consensus        66 ~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~g~g~~  134 (258)
                      ..    .+..+..+..+|..+|..+|.+++.    .+++++++||+.+||+......  .+.. .......+.++|+|++
T Consensus       121 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  200 (313)
T 3ehe_A          121 AKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQ  200 (313)
T ss_dssp             CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCC
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCe
Confidence            11    1122334556788899999998865    6999999999999997543100  0000 0011235678899999


Q ss_pred             eeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          135 KAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       135 ~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      .+++++++|+|++++.+++.+ ..++.|+++++ +.+|+.|+++.+.+.+|.+.++...+
T Consensus       201 ~~~~i~v~Dva~a~~~~~~~~-~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~  258 (313)
T 3ehe_A          201 NKSYIYISDCVDAMLFGLRGD-ERVNIFNIGSE-DQIKVKRIAEIVCEELGLSPRFRFTG  258 (313)
T ss_dssp             EECCEEHHHHHHHHHHHTTCC-SSEEEEECCCS-CCEEHHHHHHHHHHHTTCCCEEEEC-
T ss_pred             EEeEEEHHHHHHHHHHHhccC-CCCceEEECCC-CCeeHHHHHHHHHHHhCCCCceEECC
Confidence            999999999999999999843 46789999974 59999999999999999987776654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.86  E-value=1.5e-21  Score=162.12  Aligned_cols=186  Identities=12%  Similarity=0.058  Sum_probs=141.4

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHh-CCccEEEc-CCC---
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEV-GNIKRFFP-TEY---   63 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~-g~vk~~v~-S~~---   63 (258)
                      +++++.+|++|++++.+++++  +|+|||+++...               +.++.+++++|++. + +++||+ |+.   
T Consensus        52 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~v~  130 (321)
T 2pk3_A           52 NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL-DCRILTIGSSEEY  130 (321)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEEEEGGGT
T ss_pred             eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEccHHhc
Confidence            578899999999999999986  899999998532               46689999999886 6 899998 654   


Q ss_pred             CCC------CCCCCCCCCCccchhhHHHHHHHHHhC----CCCeEEEecCcccccCcCCCC---CCCCCCCC---C--Cc
Q 025054           64 GSN------VDAGHPIEPAKSGYARKAKIRRAIEAE----GIPHTYVSCNCSFGFFLPTMA---QPGATAPP---R--EN  125 (258)
Q Consensus        64 ~~~------~~~~~~~~~~~~~~~~k~~~e~~l~~~----~~~~t~lr~~~~~~~~~~~~~---~~~~~~~~---~--~~  125 (258)
                      +..      .++..+..+..+|..+|..+|.+++..    +++++++||+.+||+......   .+......   +  ..
T Consensus       131 g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~  210 (321)
T 2pk3_A          131 GMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEP  210 (321)
T ss_dssp             BSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCS
T ss_pred             CCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCC
Confidence            221      011222345567788999999998763    899999999999997643200   00000001   1  24


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      +.++++++..+++++++|+|++++.+++.+ ..++.|++++ ++.+|+.|+++.+.+.+|.+.++...|
T Consensus       211 ~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~~g~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~p  277 (321)
T 2pk3_A          211 IIKVGNLEAVRDFTDVRDIVQAYWLLSQYG-KTGDVYNVCS-GIGTRIQDVLDLLLAMANVKIDTELNP  277 (321)
T ss_dssp             EEEESCSSCEEEEEEHHHHHHHHHHHHHHC-CTTCEEEESC-SCEEEHHHHHHHHHHHSSSCCEEEECG
T ss_pred             eEEeCCCCcEEeeEEHHHHHHHHHHHHhCC-CCCCeEEeCC-CCCeeHHHHHHHHHHHhCCCCceeecc
Confidence            567788888999999999999999999876 3578999987 469999999999999999887776554

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.85  E-value=1.7e-21  Score=165.63  Aligned_cols=186  Identities=18%  Similarity=0.167  Sum_probs=142.7

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV   67 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~   67 (258)
                      .+++++.+|++|.+++.++++++|+|||+++...                +.++.+++++|++++ +++||+ |+.+...
T Consensus        72 ~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~  150 (379)
T 2c5a_A           72 FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYP  150 (379)
T ss_dssp             TCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSC
T ss_pred             CCceEEECCCCCHHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeC
Confidence            4788999999999999999999999999997421                456789999999999 999998 6533211


Q ss_pred             C------------CCC--CCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-C----CC--CCC
Q 025054           68 D------------AGH--PIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-G----AT--APP  122 (258)
Q Consensus        68 ~------------~~~--~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-~----~~--~~~  122 (258)
                      .            +..  +..+..+|..+|..+|+++++    .+++++++||+.+||+........ .    +.  ...
T Consensus       151 ~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  230 (379)
T 2c5a_A          151 EFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQT  230 (379)
T ss_dssp             GGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHH
T ss_pred             CCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHh
Confidence            0            000  223456777899999998864    589999999999999754321000 0    00  001


Q ss_pred             CCc-eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          123 REN-ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       123 ~~~-~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      ... +.++|+|++.+++++++|+|++++.+++.+  .++.|+++++ +.+|+.|+++.+.+.+|.+.++..+|
T Consensus       231 ~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~--~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p  300 (379)
T 2c5a_A          231 STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSD-EMVSMNEMAEMVLSFEEKKLPIHHIP  300 (379)
T ss_dssp             CSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS--CCSCEEECCC-CCEEHHHHHHHHHHTTTCCCCEEEEC
T ss_pred             CCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc--CCCeEEeCCC-CccCHHHHHHHHHHHhCCCCceeeCC
Confidence            222 677888899999999999999999999876  5789999974 69999999999999999887776655

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.85  E-value=1.3e-21  Score=166.14  Aligned_cols=187  Identities=13%  Similarity=0.010  Sum_probs=141.4

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHh-CCccEEEc-CCCCCC
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEV-GNIKRFFP-TEYGSN   66 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~-g~vk~~v~-S~~~~~   66 (258)
                      ..+++++.+|++|++++.++++++|+|||+++...               +.++.+++++|+++ + +++||+ |+....
T Consensus        77 ~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vy  155 (377)
T 2q1s_A           77 HPAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSI  155 (377)
T ss_dssp             CTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC---
T ss_pred             CCceEEEECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHc
Confidence            35789999999999999999999999999998531               46789999999998 8 999998 654321


Q ss_pred             ---C----C--CCC---CC-CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCc---------CCC---CCC-
Q 025054           67 ---V----D--AGH---PI-EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFL---------PTM---AQP-  116 (258)
Q Consensus        67 ---~----~--~~~---~~-~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~---------~~~---~~~-  116 (258)
                         .    .  +..   +. .+..+|..+|..+|+++++    .+++++++||+.+||+..         ...   ... 
T Consensus       156 g~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~  235 (377)
T 2q1s_A          156 AEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVT  235 (377)
T ss_dssp             -----------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHH
T ss_pred             CCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHH
Confidence               1    1  111   22 4556788899999999875    489999999999999764         110   000 


Q ss_pred             -CCC--CCCCCceEeccCCCceeeeeccchHHHH-HHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054          117 -GAT--APPRENILFYGDGQPKAIFNKEEDIATY-TIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       117 -~~~--~~~~~~~~~~g~g~~~~~~v~~~D~a~~-~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                       .+.  ......+.++|+|++.+++++++|+|++ ++.+++.+. .| .|+++++ +.+|++|+++.+.+.+|.+.++..
T Consensus       236 ~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~-~g-~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~  312 (377)
T 2q1s_A          236 PTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP-GG-VYNIASG-KETSIADLATKINEITGNNTELDR  312 (377)
T ss_dssp             HHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT-TE-EEECCCC-CCEEHHHHHHHHHHHHTCCSCCCC
T ss_pred             HHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC-CC-eEEecCC-CceeHHHHHHHHHHHhCCCCCcee
Confidence             000  0122345567888899999999999999 999998764 55 9999874 599999999999999998776554


Q ss_pred             cC
Q 025054          193 VT  194 (258)
Q Consensus       193 ~~  194 (258)
                      +|
T Consensus       313 ~p  314 (377)
T 2q1s_A          313 LP  314 (377)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.85  E-value=9.9e-21  Score=158.27  Aligned_cols=181  Identities=18%  Similarity=0.248  Sum_probs=140.3

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGS   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~   65 (258)
                      .+++++.+|++|++++.+++.++|+|||+++...               +.++.+++++|++.+ +++||+ |+   ++.
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~  133 (337)
T 1r6d_A           55 PRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGS  133 (337)
T ss_dssp             TTEEEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCC
T ss_pred             CCeEEEEcCCCCHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCC
Confidence            4688999999999999999999999999998531               567899999999999 999998 65   332


Q ss_pred             CC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC---CCCCCCCCCCceEeccCCCc
Q 025054           66 NV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA---QPGATAPPRENILFYGDGQP  134 (258)
Q Consensus        66 ~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~g~~  134 (258)
                      ..    ++..+..+..+|..+|..+|+++++    .+++++++||+.+||+....-.   .+.........+.+++++++
T Consensus       134 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (337)
T 1r6d_A          134 IDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGAN  213 (337)
T ss_dssp             CSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCC
T ss_pred             CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCe
Confidence            21    1122334566788899999998865    5899999999999997642100   00000012334667788889


Q ss_pred             eeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          135 KAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       135 ~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      .+++++++|+|++++.+++.+. .++.|+++++ +.+|+.|+++.+.+.+|.+.
T Consensus       214 ~~~~i~v~Dva~a~~~~~~~~~-~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~  265 (337)
T 1r6d_A          214 VREWVHTDDHCRGIALVLAGGR-AGEIYHIGGG-LELTNRELTGILLDSLGADW  265 (337)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHCC-TTCEEEECCC-CEEEHHHHHHHHHHHHTCCG
T ss_pred             eEeeEeHHHHHHHHHHHHhCCC-CCCEEEeCCC-CCccHHHHHHHHHHHhCCCc
Confidence            9999999999999999987653 6789999974 58999999999999999865

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.85  E-value=4.2e-20  Score=154.63  Aligned_cols=188  Identities=19%  Similarity=0.237  Sum_probs=143.5

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---   63 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---   63 (258)
                      .+++++.+|++|++++.++++  ++|+|||+++...               +.++.+++++|++.+ +++||+ |+.   
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~  133 (341)
T 3enk_A           55 KTPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVY  133 (341)
T ss_dssp             CCCEEECCCTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGB
T ss_pred             CCceEEEeecCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEe
Confidence            468899999999999999998  8999999998531               567889999999999 999998 653   


Q ss_pred             CCCC----CCCCCCCCCccchhhHHHHHHHHHh----C-CCCeEEEecCcccccCcCCCCCCCCC-------------C-
Q 025054           64 GSNV----DAGHPIEPAKSGYARKAKIRRAIEA----E-GIPHTYVSCNCSFGFFLPTMAQPGAT-------------A-  120 (258)
Q Consensus        64 ~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~-~~~~t~lr~~~~~~~~~~~~~~~~~~-------------~-  120 (258)
                      +...    ++..+..+..+|..+|..+|++++.    . +++++++||+.+||............             . 
T Consensus       134 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~  213 (341)
T 3enk_A          134 GVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAV  213 (341)
T ss_dssp             CSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHH
T ss_pred             cCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHh
Confidence            2211    1122333556788899999999875    2 59999999999999753221100000             0 


Q ss_pred             CCCCceEecc------CCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054          121 PPRENILFYG------DGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       121 ~~~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                      .....+.++|      +|++.++++|++|+|++++.+++.+  ...+++|++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus       214 ~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~  292 (341)
T 3enk_A          214 GKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGT-GRGYSVLEVVRAFEKASGRAVPYEL  292 (341)
T ss_dssp             TSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESC-SCCEEHHHHHHHHHHHHCSCCCEEE
T ss_pred             cCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCC-CCceeHHHHHHHHHHHhCCCcceee
Confidence            0113455666      7899999999999999999999863  34789999997 4699999999999999999887766


Q ss_pred             cC
Q 025054          193 VT  194 (258)
Q Consensus       193 ~~  194 (258)
                      .+
T Consensus       293 ~~  294 (341)
T 3enk_A          293 VA  294 (341)
T ss_dssp             EC
T ss_pred             CC
Confidence            55

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.85  E-value=7e-20  Score=152.61  Aligned_cols=187  Identities=16%  Similarity=0.176  Sum_probs=141.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV   67 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~   67 (258)
                      +++++.+|++|.+++.++++  ++|+|||+++...               +.++.+++++|++++ +++||+ |+.+...
T Consensus        45 ~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~  123 (330)
T 2c20_A           45 GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYG  123 (330)
T ss_dssp             TSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGC
T ss_pred             CcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeC
Confidence            68899999999999999998  9999999998531               567889999999999 999998 6643211


Q ss_pred             -------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC------CCCC------CC-CC
Q 025054           68 -------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ------PGAT------AP-PR  123 (258)
Q Consensus        68 -------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~------~~~~------~~-~~  123 (258)
                             ++..+..+..+|..+|..+|++++.    .+++++++||+.+||...+....      ....      .. ..
T Consensus       124 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  203 (330)
T 2c20_A          124 EVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQR  203 (330)
T ss_dssp             SCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSS
T ss_pred             CCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcC
Confidence                   1122233456788899999998875    48999999999999975221100      0000      01 12


Q ss_pred             CceEecc------CCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          124 ENILFYG------DGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       124 ~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      ..+.++|      +|++.+++++++|+|++++.+++.+..  .++.|++++ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus       204 ~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~  281 (330)
T 2c20_A          204 EKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGN-GNGFSVKEIVDAVREVTNHEIPAEVAP  281 (330)
T ss_dssp             SCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCC-TTCBCHHHHHHHHHHHTTSCCCEEEEC
T ss_pred             CCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCC-CCCccHHHHHHHHHHHhCCCCceeeCC
Confidence            2355665      678899999999999999999976532  468999987 468999999999999999887766554

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.84  E-value=2.7e-20  Score=159.01  Aligned_cols=186  Identities=18%  Similarity=0.193  Sum_probs=138.3

Q ss_pred             eeEEeccCCCHHHHHHhhC--C-CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC--
Q 025054            7 CLIAQGDLHDHESLVKAIK--P-VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS--   65 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~--g-~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~--   65 (258)
                      ++++.+|++|++++.++++  + +|+|||+++...               +.++.+++++|++++ +++||+ |+.+.  
T Consensus        71 ~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g  149 (397)
T 1gy8_A           71 AALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFG  149 (397)
T ss_dssp             CEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTB
T ss_pred             EEEEECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhC
Confidence            8899999999999999998  7 999999998532               567889999999999 999998 65322  


Q ss_pred             -CC-----------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCC-C----CCC-C-----
Q 025054           66 -NV-----------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTM-A----QPG-A-----  118 (258)
Q Consensus        66 -~~-----------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~-~----~~~-~-----  118 (258)
                       ..           .+..+..|..+|..+|..+|.+++.    .+++++++||+.+||...... .    ... .     
T Consensus       150 ~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~  229 (397)
T 1gy8_A          150 NPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIIL  229 (397)
T ss_dssp             SCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHH
T ss_pred             CCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHH
Confidence             11           1111223456777899999998876    489999999999998752110 0    000 0     


Q ss_pred             -----C-CCCC-----------CceEecc------CCCceeeeeccchHHHHHHHHhcCCCCC-----C---ceEEEcCC
Q 025054          119 -----T-APPR-----------ENILFYG------DGQPKAIFNKEEDIATYTIKAVDDPRTL-----N---KTLYLRPP  167 (258)
Q Consensus       119 -----~-~~~~-----------~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~~~~-----~---~~~~l~g~  167 (258)
                           . ....           ..+.++|      +|++.++|||++|+|++++.+++.+...     +   ++|++++ 
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~-  308 (397)
T 1gy8_A          230 GRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT-  308 (397)
T ss_dssp             HHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESC-
T ss_pred             HHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCC-
Confidence                 0 0111           1356666      6788999999999999999998765322     3   7999986 


Q ss_pred             CCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          168 KNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       168 ~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      ++.+|+.|+++.+.+.+|.+.++...+
T Consensus       309 ~~~~s~~e~~~~i~~~~g~~~~~~~~~  335 (397)
T 1gy8_A          309 SRGYSVREVIEVARKTTGHPIPVRECG  335 (397)
T ss_dssp             SCCEEHHHHHHHHHHHHCCCCCEEEEC
T ss_pred             CCcccHHHHHHHHHHHhCCCCCeeeCC
Confidence            458999999999999999887766544

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.84  E-value=6.8e-21  Score=160.29  Aligned_cols=183  Identities=14%  Similarity=0.124  Sum_probs=140.7

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC---
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS---   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~---   65 (258)
                      .+++++.+|++|.+++.++++++|+|||+++...               +.++.+++++|++++ +++||+ |+.++   
T Consensus        81 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~  159 (352)
T 1sb8_A           81 SNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGD  159 (352)
T ss_dssp             TTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTT
T ss_pred             CceEEEECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCC
Confidence            5789999999999999999999999999998531               567899999999999 999998 65322   


Q ss_pred             CC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-C----C--CCCCCCceEecc
Q 025054           66 NV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-G----A--TAPPRENILFYG  130 (258)
Q Consensus        66 ~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-~----~--~~~~~~~~~~~g  130 (258)
                      ..    .+..+..+..+|..+|..+|++++.    .+++++++||+.+||+........ .    +  .......+.++|
T Consensus       160 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  239 (352)
T 1sb8_A          160 HPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYING  239 (352)
T ss_dssp             CCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEES
T ss_pred             CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeC
Confidence            11    1112223456777899999999864    489999999999999764321000 0    0  001123456778


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCC-CCCCceEEEcCCCCccCHHHHHHHHHHHh---CCcce
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDP-RTLNKTLYLRPPKNIYSFKELVALWEKKI---GKTLE  189 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~-~~~~~~~~l~g~~~~~t~~e~~~~~~~~~---g~~~~  189 (258)
                      +|++.+++++++|+|++++.++..+ ...++.|+++++ +.+|+.|+++.+.+.+   |.+.+
T Consensus       240 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~g~~~~  301 (352)
T 1sb8_A          240 DGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVG-GRTSLNQLFFALRDGLAENGVSYH  301 (352)
T ss_dssp             SSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred             CCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCC-CCccHHHHHHHHHHHHHhcCCCCC
Confidence            8899999999999999999988763 446889999974 5999999999999999   87655

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.84  E-value=2.6e-20  Score=152.32  Aligned_cols=190  Identities=13%  Similarity=0.043  Sum_probs=144.7

Q ss_pred             cccCceeEE-----eccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEE
Q 025054            2 LYMINCLIA-----QGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         2 l~~~gv~~~-----~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v   59 (258)
                      |.+.|.+++     .+|+.|.+++.++++  ++|+|||+++...               +.++.+++++|++++ + +||
T Consensus        25 L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v  102 (287)
T 3sc6_A           25 LNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLV  102 (287)
T ss_dssp             SCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEE
T ss_pred             HHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEE
Confidence            445566665     368999999999998  7999999998542               466789999999999 8 588


Q ss_pred             c-CCC---CCCC----CCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCC-CCCCCCCCCceEecc
Q 025054           60 P-TEY---GSNV----DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQ-PGATAPPRENILFYG  130 (258)
Q Consensus        60 ~-S~~---~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g  130 (258)
                      + |+.   +...    ++..+..|..+|..+|..+|+++++...+++++||+.+||+....+.. ..........+.++|
T Consensus       103 ~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  182 (287)
T 3sc6_A          103 YISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVA  182 (287)
T ss_dssp             EEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEEC
T ss_pred             EEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeec
Confidence            7 553   2211    112233456778889999999999988899999999999965332110 000012234456665


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI  198 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~  198 (258)
                        ++.+++++++|+|++++.+++++.  ++.|+++++ +.+|+.|+++.+.+.+|.+.++..++..++
T Consensus       183 --~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~  245 (287)
T 3sc6_A          183 --DQIGSPTYVADLNVMINKLIHTSL--YGTYHVSNT-GSCSWFEFAKKIFSYANMKVNVLPVSTEEF  245 (287)
T ss_dssp             --SCEECCEEHHHHHHHHHHHHTSCC--CEEEECCCB-SCEEHHHHHHHHHHHHTCCCEEEEECHHHH
T ss_pred             --CcccCceEHHHHHHHHHHHHhCCC--CCeEEEcCC-CcccHHHHHHHHHHHcCCCcceeeeehhhc
Confidence              488999999999999999999875  789999974 589999999999999999999988887654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.84  E-value=4.3e-21  Score=157.32  Aligned_cols=186  Identities=15%  Similarity=0.071  Sum_probs=138.7

Q ss_pred             cccCceeEE-----eccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEE
Q 025054            2 LYMINCLIA-----QGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         2 l~~~gv~~~-----~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v   59 (258)
                      |.+.|.+++     .+|++|.+++.++++  ++|+|||+++...               +.++.+++++|++++ + +||
T Consensus        32 L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv  109 (292)
T 1vl0_A           32 LKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIV  109 (292)
T ss_dssp             HTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEE
T ss_pred             HHhCCCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEE
Confidence            345566666     478999999999998  8999999998532               456799999999999 8 888


Q ss_pred             c-CCC---CCCC----CCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCC-CCCCCCCCCCceEecc
Q 025054           60 P-TEY---GSNV----DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMA-QPGATAPPRENILFYG  130 (258)
Q Consensus        60 ~-S~~---~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g  130 (258)
                      + |+.   +...    .+..+..+..+|..+|..+|+++++.+.+++++||+.+||+ ...+. .+.........+.+.|
T Consensus       110 ~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~  188 (292)
T 1vl0_A          110 QISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVH  188 (292)
T ss_dssp             EEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEES
T ss_pred             EechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCCCeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeec
Confidence            7 653   2211    11222334567888999999999998889999999999987 22110 0000001122344554


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE  195 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~  195 (258)
                        ++..++++++|+|++++.+++++  .++.|+++++ +.+|+.|+++.+.+.+|.+.++..++.
T Consensus       189 --~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~  248 (292)
T 1vl0_A          189 --DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCK-GICSWYDFAVEIFRLTGIDVKVTPCTT  248 (292)
T ss_dssp             --SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCB-SCEEHHHHHHHHHHHHCCCCEEEEECS
T ss_pred             --CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCC-CCccHHHHHHHHHHHhCCCCceeeccc
Confidence              57889999999999999999876  6889999874 589999999999999999887777664

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.84  E-value=1.4e-20  Score=155.62  Aligned_cols=185  Identities=15%  Similarity=0.155  Sum_probs=140.2

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---   63 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---   63 (258)
                      .+++++.+|++|++++.++++  ++|+|||+++...               +.++.+++++|++++ +++||+ |+.   
T Consensus        43 ~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~  121 (311)
T 2p5y_A           43 KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAI  121 (311)
T ss_dssp             TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHH
T ss_pred             cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhh
Confidence            357889999999999999998  8999999997531               466789999999999 999998 654   


Q ss_pred             -CC-C----CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC----C--CCCCCceE
Q 025054           64 -GS-N----VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA----T--APPRENIL  127 (258)
Q Consensus        64 -~~-~----~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~----~--~~~~~~~~  127 (258)
                       +. .    ..+..+..+..+|..+|..+|++++.    .+++++++||+.+||+..........    .  ......+.
T Consensus       122 ~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  201 (311)
T 2p5y_A          122 YGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVT  201 (311)
T ss_dssp             HCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEE
T ss_pred             cCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcE
Confidence             32 1    11112223456777899999998864    58999999999999975432100000    0  01122355


Q ss_pred             ec-----cCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          128 FY-----GDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       128 ~~-----g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      ++     |+|++.+++++++|+|++++.+++.+   ++.|++++ ++.+|++|+++.+.+.+|.+.++...+
T Consensus       202 ~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~---~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~  269 (311)
T 2p5y_A          202 LYARKTPGDEGCVRDYVYVGDVAEAHALALFSL---EGIYNVGT-GEGHTTREVLMAVAEAAGKAPEVQPAP  269 (311)
T ss_dssp             EECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC---CEEEEESC-SCCEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             EEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC---CCEEEeCC-CCCccHHHHHHHHHHHhCCCCCceeCC
Confidence            56     78888999999999999999998764   78999997 469999999999999999887765554

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=3e-20  Score=146.85  Aligned_cols=162  Identities=16%  Similarity=0.119  Sum_probs=120.7

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCcc---------chhchHHHHHHHHHhCCccEEEc-CCCCCCCCC-----
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRT---------EVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDA-----   69 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~---------~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~-----   69 (258)
                      .+++++.+|++|.+++.++++++|+|||+++..         ++.++++++++|++++ ++|||+ |+.+.....     
T Consensus        46 ~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~  124 (227)
T 3dhn_A           46 EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRL  124 (227)
T ss_dssp             TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEEG
T ss_pred             CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCcc
Confidence            578999999999999999999999999999865         2778999999999999 999999 776542111     


Q ss_pred             -CCCCCCCccchhhHHHHHHHHH----hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchH
Q 025054           70 -GHPIEPAKSGYARKAKIRRAIE----AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDI  144 (258)
Q Consensus        70 -~~~~~~~~~~~~~k~~~e~~l~----~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~  144 (258)
                       ..+..|..+|..+|...|.+++    +.+++++++||+.+||+..... .+   . ......++. ++. +++++++|+
T Consensus       125 ~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~---~-~~~~~~~~~-~~~-~~~i~~~Dv  197 (227)
T 3dhn_A          125 MDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTG-RY---R-LGKDDMIVD-IVG-NSHISVEDY  197 (227)
T ss_dssp             GGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCC-CC---E-EESSBCCCC-TTS-CCEEEHHHH
T ss_pred             ccCCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccc-ce---e-ecCCCcccC-CCC-CcEEeHHHH
Confidence             1122345667779999995554    3689999999999998754321 10   0 111222222 222 789999999


Q ss_pred             HHHHHHHhcCCCCCCceEEEcCCCCccCHHH
Q 025054          145 ATYTIKAVDDPRTLNKTLYLRPPKNIYSFKE  175 (258)
Q Consensus       145 a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e  175 (258)
                      |++++.+++++...|++|++++|+ +.++++
T Consensus       198 a~ai~~~l~~~~~~g~~~~~~~~~-~~~~~~  227 (227)
T 3dhn_A          198 AAAMIDELEHPKHHQERFTIGYLE-HHHHHH  227 (227)
T ss_dssp             HHHHHHHHHSCCCCSEEEEEECCS-CCC---
T ss_pred             HHHHHHHHhCccccCcEEEEEeeh-hcccCC
Confidence            999999999998899999999974 877753

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.83  E-value=1.5e-20  Score=149.58  Aligned_cols=159  Identities=18%  Similarity=0.126  Sum_probs=129.4

Q ss_pred             Cce-eEEeccCCCHHHHHHhhCCCcEEEEccCccc-----------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCC
Q 025054            5 INC-LIAQGDLHDHESLVKAIKPVDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGH   71 (258)
Q Consensus         5 ~gv-~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~   71 (258)
                      .++ +++.+|++  +++.++++++|+|||+++...           +.++.+++++|++++ ++|||+ |+++.......
T Consensus        64 ~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~  140 (236)
T 3e8x_A           64 RGASDIVVANLE--EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPDQG  140 (236)
T ss_dssp             TTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGGGS
T ss_pred             CCCceEEEcccH--HHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCCCC
Confidence            478 99999998  788899999999999998642           667899999999999 999999 88876543221


Q ss_pred             CCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHH
Q 025054           72 PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKA  151 (258)
Q Consensus        72 ~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~  151 (258)
                      + .+..+|..+|..+|+++++.++++++||||+++++...            +.+...+++....++++++|+|++++.+
T Consensus       141 ~-~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~~------------~~~~~~~~~~~~~~~i~~~Dva~~~~~~  207 (236)
T 3e8x_A          141 P-MNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEEST------------GKVTVSPHFSEITRSITRHDVAKVIAEL  207 (236)
T ss_dssp             C-GGGHHHHHHHHHHHHHHHHSSSEEEEEEECSEECSCCC------------SEEEEESSCSCCCCCEEHHHHHHHHHHH
T ss_pred             h-hhhhhHHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCC------------CeEEeccCCCcccCcEeHHHHHHHHHHH
Confidence            1 23456778999999999999999999999999986421            1233344555678899999999999999


Q ss_pred             hcCCCCCCceEEEcCCCCccCHHHHHHHHH
Q 025054          152 VDDPRTLNKTLYLRPPKNIYSFKELVALWE  181 (258)
Q Consensus       152 l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~  181 (258)
                      ++++...++.|++++ + ..|++|+++.++
T Consensus       208 ~~~~~~~g~~~~v~~-~-~~~~~e~~~~i~  235 (236)
T 3e8x_A          208 VDQQHTIGKTFEVLN-G-DTPIAKVVEQLG  235 (236)
T ss_dssp             TTCGGGTTEEEEEEE-C-SEEHHHHHHTC-
T ss_pred             hcCccccCCeEEEeC-C-CcCHHHHHHHhc
Confidence            998876889999986 4 699999998765

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.83  E-value=1.5e-20  Score=160.90  Aligned_cols=187  Identities=21%  Similarity=0.222  Sum_probs=140.3

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc------------------hhchHHHHHHHHHhCCc-cEEEc-CC
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE------------------VEDQFKLIAAIKEVGNI-KRFFP-TE   62 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~------------------~~~~~~li~aa~~~g~v-k~~v~-S~   62 (258)
                      .+++++.+|++|.+++.+++++  +|+|||+++...                  +.++.+++++|++.+ + ++||+ |+
T Consensus        77 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS  155 (404)
T 1i24_A           77 KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGT  155 (404)
T ss_dssp             CCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECC
T ss_pred             CceEEEECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCc
Confidence            4688999999999999999998  999999997421                  456789999999998 8 59998 66


Q ss_pred             CCC---CCC---CC--------------CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCC-----
Q 025054           63 YGS---NVD---AG--------------HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTM-----  113 (258)
Q Consensus        63 ~~~---~~~---~~--------------~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~-----  113 (258)
                      .+.   ...   +.              .+..+..+|..+|..+|++++.    .+++++++||+.+||+.....     
T Consensus       156 ~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~  235 (404)
T 1i24_A          156 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEE  235 (404)
T ss_dssp             GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGG
T ss_pred             HHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccc
Confidence            432   110   00              1233456677899999998765    489999999999999754210     


Q ss_pred             -----CC----CCCC------CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCC--ceEEEcCCCCccCHHHH
Q 025054          114 -----AQ----PGAT------APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLN--KTLYLRPPKNIYSFKEL  176 (258)
Q Consensus       114 -----~~----~~~~------~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~--~~~~l~g~~~~~t~~e~  176 (258)
                           ..    ....      ......+.++|+|++.++|||++|+|++++.+++.+...+  +.|++++  +.+|+.|+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~--~~~s~~e~  313 (404)
T 1i24_A          236 LRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT--EQFSVNEL  313 (404)
T ss_dssp             GCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS--EEEEHHHH
T ss_pred             cccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC--CCCcHHHH
Confidence                 00    0000      0112345677888999999999999999999998765445  7999985  48999999


Q ss_pred             HHHHHHH---hCCcceeEecC
Q 025054          177 VALWEKK---IGKTLEKIYVT  194 (258)
Q Consensus       177 ~~~~~~~---~g~~~~~~~~~  194 (258)
                      ++.+.+.   +|.++++..+|
T Consensus       314 ~~~i~~~~~~~g~~~~~~~~p  334 (404)
T 1i24_A          314 ASLVTKAGSKLGLDVKKMTVP  334 (404)
T ss_dssp             HHHHHHHHHTTTCCCCEEEEC
T ss_pred             HHHHHHHHHhhCCCccccccC
Confidence            9999998   78877665554

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.83  E-value=2.2e-20  Score=156.79  Aligned_cols=180  Identities=18%  Similarity=0.236  Sum_probs=138.0

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---CC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GS   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~   65 (258)
                      .+++++.+|++|.+++.++++++|+|||+++...               +.++.+++++|++.+ + +||+ |+.   |.
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~  131 (348)
T 1oc2_A           54 DRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGD  131 (348)
T ss_dssp             SSEEEEECCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCC
T ss_pred             CCeEEEECCCCCHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCC
Confidence            4789999999999999999999999999998531               567899999999999 8 8887 653   32


Q ss_pred             CC----------------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-CC--CCCC
Q 025054           66 NV----------------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-GA--TAPP  122 (258)
Q Consensus        66 ~~----------------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-~~--~~~~  122 (258)
                      ..                ++..+..+..+|..+|..+|++++.    .+++++++||+.+||+....-... .+  ....
T Consensus       132 ~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~  211 (348)
T 1oc2_A          132 LPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILA  211 (348)
T ss_dssp             BCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHH
T ss_pred             CcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHc
Confidence            11                1112234556778899999998875    489999999999999764210000 00  0011


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      ...+.+++++++.+++++++|+|++++.+++.+. .++.|++++ +..+|+.|+++.+.+.+|.+.
T Consensus       212 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~~~i~~-~~~~s~~e~~~~i~~~~g~~~  275 (348)
T 1oc2_A          212 GIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR-MGETYLIGA-DGEKNNKEVLELILEKMGQPK  275 (348)
T ss_dssp             TCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC-TTCEEEECC-SCEEEHHHHHHHHHHHTTCCT
T ss_pred             CCCceEecCCCceEeeEEHHHHHHHHHHHhhCCC-CCCeEEeCC-CCCCCHHHHHHHHHHHhCCCc
Confidence            2345667888899999999999999999987653 678999997 458999999999999999865

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.83  E-value=2.8e-19  Score=150.02  Aligned_cols=188  Identities=20%  Similarity=0.192  Sum_probs=139.1

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN   66 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~   66 (258)
                      .+++++.+|++|.+++.++++  ++|+|||+++...               +.++.+++++|++++ +++||+ |+.+..
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~  136 (348)
T 1ek6_A           58 RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVY  136 (348)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGG
T ss_pred             CceEEEECCCCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHh
Confidence            367899999999999999998  8999999998531               567889999999999 999998 653221


Q ss_pred             ---C----CCCCCCCC-CccchhhHHHHHHHHHh---CC--CCeEEEecCcccccCcCCCCCC------C-CC------C
Q 025054           67 ---V----DAGHPIEP-AKSGYARKAKIRRAIEA---EG--IPHTYVSCNCSFGFFLPTMAQP------G-AT------A  120 (258)
Q Consensus        67 ---~----~~~~~~~~-~~~~~~~k~~~e~~l~~---~~--~~~t~lr~~~~~~~~~~~~~~~------~-~~------~  120 (258)
                         .    ++..+..| ..+|..+|..+|++++.   .+  ++++++||+.+||+..+.....      . ..      .
T Consensus       137 g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~  216 (348)
T 1ek6_A          137 GNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVA  216 (348)
T ss_dssp             CSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHH
T ss_pred             CCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHH
Confidence               1    11112223 56677899999998865   24  9999999999998742111000      0 00      0


Q ss_pred             C-CCCceEecc------CCCceeeeeccchHHHHHHHHhcCCC-CCC-ceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          121 P-PRENILFYG------DGQPKAIFNKEEDIATYTIKAVDDPR-TLN-KTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       121 ~-~~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~-~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      . ....+.++|      +|++.++|||++|+|++++.+++.+. ..+ +.|++++ ++.+|+.|+++.+.+.+|.++++.
T Consensus       217 ~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~  295 (348)
T 1ek6_A          217 IGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT-GTGYSVLQMVQAMEKASGKKIPYK  295 (348)
T ss_dssp             HTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECC-SCCEEHHHHHHHHHHHHCSCCCEE
T ss_pred             HhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCC-CCCccHHHHHHHHHHHhCCCCcee
Confidence            0 223455655      67889999999999999999987652 344 8999987 458999999999999999887766


Q ss_pred             ecC
Q 025054          192 YVT  194 (258)
Q Consensus       192 ~~~  194 (258)
                      ..+
T Consensus       296 ~~~  298 (348)
T 1ek6_A          296 VVA  298 (348)
T ss_dssp             EEC
T ss_pred             eCC
Confidence            554

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.83  E-value=1.9e-20  Score=155.50  Aligned_cols=190  Identities=13%  Similarity=0.115  Sum_probs=140.2

Q ss_pred             ccCceeEE------eccCCCHHHHHHhhC--CCcEEEEccCccc----------------hhchHHHHHHHHHhCCccEE
Q 025054            3 YMINCLIA------QGDLHDHESLVKAIK--PVDVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRF   58 (258)
Q Consensus         3 ~~~gv~~~------~~D~~d~~~l~~al~--g~d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~   58 (258)
                      .+.|.+++      .+|+.|.+++.++++  ++|+|||+++...                +.++.+++++|++++ +++|
T Consensus        24 ~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~  102 (321)
T 1e6u_A           24 EQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKL  102 (321)
T ss_dssp             TTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEE
T ss_pred             HhCCCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeE
Confidence            34455544      368999999999999  9999999997531                467889999999999 9999


Q ss_pred             Ec-CCCCCCC---C----CCC----CCCCC-ccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-CC--
Q 025054           59 FP-TEYGSNV---D----AGH----PIEPA-KSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-GA--  118 (258)
Q Consensus        59 v~-S~~~~~~---~----~~~----~~~~~-~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-~~--  118 (258)
                      |+ |+.+...   .    +..    ...|. .+|..+|..+|+++++    .+++++++||+.+||+........ ..  
T Consensus       103 v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~  182 (321)
T 1e6u_A          103 LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIP  182 (321)
T ss_dssp             EEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHH
T ss_pred             EEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHH
Confidence            98 7643211   0    000    11222 3667799999999876    489999999999999754321000 00  


Q ss_pred             --C-CC-C----C-CceEeccCCCceeeeeccchHHHHHHHHhcCCCC--------CCceEEEcCCCCccCHHHHHHHHH
Q 025054          119 --T-AP-P----R-ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRT--------LNKTLYLRPPKNIYSFKELVALWE  181 (258)
Q Consensus       119 --~-~~-~----~-~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--------~~~~~~l~g~~~~~t~~e~~~~~~  181 (258)
                        . .. .    + ..+.++++|++.+++|+++|+|++++.+++.+..        .++.|++++ ++.+|+.|+++.+.
T Consensus       183 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~  261 (321)
T 1e6u_A          183 ALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGT-GVDCTIRELAQTIA  261 (321)
T ss_dssp             HHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESC-SCCEEHHHHHHHHH
T ss_pred             HHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCC-CCCccHHHHHHHHH
Confidence              0 00 0    1 3566788899999999999999999999987643        268999987 45899999999999


Q ss_pred             HHhCCcceeEecC
Q 025054          182 KKIGKTLEKIYVT  194 (258)
Q Consensus       182 ~~~g~~~~~~~~~  194 (258)
                      +.+|.+.++...+
T Consensus       262 ~~~g~~~~~~~~~  274 (321)
T 1e6u_A          262 KVVGYKGRVVFDA  274 (321)
T ss_dssp             HHHTCCSEEEEET
T ss_pred             HHhCCCCceEeCC
Confidence            9999887766554

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.82  E-value=3.1e-20  Score=155.67  Aligned_cols=188  Identities=14%  Similarity=0.169  Sum_probs=141.3

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCcc-EEEc-CCC---
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIK-RFFP-TEY---   63 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk-~~v~-S~~---   63 (258)
                      +++++.+|++|.+++.+++++  +|+|||+++...               +.++.+++++|++.+ ++ +||+ |+.   
T Consensus        51 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~  129 (347)
T 1orr_A           51 NFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVY  129 (347)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGG
T ss_pred             ceEEEEcCCCCHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHh
Confidence            488999999999999999998  999999998531               567889999999999 86 9998 653   


Q ss_pred             CCCC--------------------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCC
Q 025054           64 GSNV--------------------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGAT  119 (258)
Q Consensus        64 ~~~~--------------------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~  119 (258)
                      +...                    .+..+..+..+|..+|..+|++++.    .++++++|||+.+||............
T Consensus       130 g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~  209 (347)
T 1orr_A          130 GDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWV  209 (347)
T ss_dssp             TTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHH
T ss_pred             CCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHH
Confidence            2111                    1111233456677899999999876    389999999999999754221000000


Q ss_pred             ------CCCCC-----ceEeccCCCceeeeeccchHHHHHHHHhcCC-CCCCceEEEcCCC-CccCHHHHHHHHHHHhCC
Q 025054          120 ------APPRE-----NILFYGDGQPKAIFNKEEDIATYTIKAVDDP-RTLNKTLYLRPPK-NIYSFKELVALWEKKIGK  186 (258)
Q Consensus       120 ------~~~~~-----~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~~~~~~~l~g~~-~~~t~~e~~~~~~~~~g~  186 (258)
                            .....     .+.++|+|++.+++++++|+|++++.+++.+ ...|+.|+++|.. ..+|+.|+++.+.+.+|.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~  289 (347)
T 1orr_A          210 GWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI  289 (347)
T ss_dssp             HHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCC
Confidence                  00111     4567788999999999999999999999863 3467899998632 149999999999999998


Q ss_pred             cceeEecC
Q 025054          187 TLEKIYVT  194 (258)
Q Consensus       187 ~~~~~~~~  194 (258)
                      +.++...+
T Consensus       290 ~~~~~~~~  297 (347)
T 1orr_A          290 DMRFTNLP  297 (347)
T ss_dssp             CCCEEEEC
T ss_pred             CCCceeCC
Confidence            87776655

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.82  E-value=5.9e-21  Score=158.38  Aligned_cols=165  Identities=16%  Similarity=0.178  Sum_probs=125.6

Q ss_pred             CCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCC---CCC----CCCCCCCCCCccchhhH
Q 025054           26 PVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSN----VDAGHPIEPAKSGYARK   83 (258)
Q Consensus        26 g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~----~~~~~~~~~~~~~~~~k   83 (258)
                      ++|+|||+++...              +.++.+++++|++++ +++||+ |+.   +..    ..+..+..|..+|..+|
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK  147 (321)
T 3vps_A           69 DVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASK  147 (321)
T ss_dssp             TEEEEEECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             cCCEEEECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            8999999998532              456789999999999 999998 653   221    11222334567788899


Q ss_pred             HHHHHHHHh----CCC-CeEEEecCcccccCcCCCC---CCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054           84 AKIRRAIEA----EGI-PHTYVSCNCSFGFFLPTMA---QPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus        84 ~~~e~~l~~----~~~-~~t~lr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ..+|+++++    .++ +++++||+.+||+......   .+.........+.++|+|++.+++++++|+|++++.++.++
T Consensus       148 ~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~  227 (321)
T 3vps_A          148 VGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRP  227 (321)
T ss_dssp             HHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSC
T ss_pred             HHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcC
Confidence            999999876    688 9999999999997543200   00000012345678888999999999999999999999987


Q ss_pred             CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054          156 RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE  195 (258)
Q Consensus       156 ~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~  195 (258)
                      .. | .|+++++ +.+|+.|+++.+. .+|.+.++...+.
T Consensus       228 ~~-g-~~~i~~~-~~~s~~e~~~~i~-~~g~~~~~~~~~~  263 (321)
T 3vps_A          228 LP-S-VVNFGSG-QSLSVNDVIRILQ-ATSPAAEVARKQP  263 (321)
T ss_dssp             CC-S-EEEESCS-CCEEHHHHHHHHH-TTCTTCEEEEECC
T ss_pred             CC-C-eEEecCC-CcccHHHHHHHHH-HhCCCCccccCCC
Confidence            53 6 9999974 5899999999999 9999888776553

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.82  E-value=7.7e-20  Score=151.14  Aligned_cols=178  Identities=13%  Similarity=0.118  Sum_probs=135.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCC---CC
Q 025054            6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GS   65 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~   65 (258)
                      +++++.+|++|.+++.++++  ++|+|||+++...              +.++.+++++|++++ +++||+ |+.   +.
T Consensus        46 ~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~  124 (312)
T 2yy7_A           46 SGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGP  124 (312)
T ss_dssp             SSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCT
T ss_pred             CCceEEecCCCHHHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCC
Confidence            57889999999999999998  8999999998531              467889999999999 999998 653   22


Q ss_pred             CCC-----CCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-C------CCCCCCCceEec
Q 025054           66 NVD-----AGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-G------ATAPPRENILFY  129 (258)
Q Consensus        66 ~~~-----~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~  129 (258)
                      ...     +..+..|..+|..+|..+|++++.    .+++++++||+.+||+........ .      ......+.+.++
T Consensus       125 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (312)
T 2yy7_A          125 TTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECF  204 (312)
T ss_dssp             TSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEES
T ss_pred             CCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEe
Confidence            111     112233456788899999998865    489999999999999643211000 0      000123456677


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCCC---CCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPRT---LNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~~---~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      +++++.+++++++|+|++++.+++.+..   .++.|+++|  +.+|++|+++.+.+.+|.
T Consensus       205 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~--~~~s~~e~~~~i~~~~~~  262 (312)
T 2yy7_A          205 LSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA--MSFTPTEIANEIKKHIPE  262 (312)
T ss_dssp             SCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS--EEECHHHHHHHHHTTCTT
T ss_pred             cCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC--CccCHHHHHHHHHHHCCC
Confidence            8888999999999999999999987642   248999985  589999999999999983

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.82  E-value=1.4e-19  Score=142.20  Aligned_cols=157  Identities=17%  Similarity=0.111  Sum_probs=125.7

Q ss_pred             CceeEEeccCCC-HHHHHHhhCCCcEEEEccCccc-------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCC---C
Q 025054            5 INCLIAQGDLHD-HESLVKAIKPVDVVISAVGRTE-------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGH---P   72 (258)
Q Consensus         5 ~gv~~~~~D~~d-~~~l~~al~g~d~Vi~~~~~~~-------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~---~   72 (258)
                      .+++++.+|++| ++++.++++++|+|||+++...       +.++.+++++|++++ +++||+ |+.+.......   +
T Consensus        41 ~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~e~~  119 (219)
T 3dqp_A           41 NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEKWIGAG  119 (219)
T ss_dssp             TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGGCCSHH
T ss_pred             CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCcccccc
Confidence            578999999999 9999999999999999998642       678899999999999 999998 77654332110   0


Q ss_pred             CCCCccchhhHHHHHHHH-HhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHH
Q 025054           73 IEPAKSGYARKAKIRRAI-EAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKA  151 (258)
Q Consensus        73 ~~~~~~~~~~k~~~e~~l-~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~  151 (258)
                      ..+..+|..+|..+|+++ ++.++++++||||+++++...            +.+.+   ++...++++++|+|++++.+
T Consensus       120 ~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~~~~------------~~~~~---~~~~~~~i~~~Dva~~i~~~  184 (219)
T 3dqp_A          120 FDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEAT------------GLIDI---NDEVSASNTIGDVADTIKEL  184 (219)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEECSCCC------------SEEEE---SSSCCCCEEHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHHHHHhccCCcEEEEeCceEecCCCC------------Ccccc---CCCcCCcccHHHHHHHHHHH
Confidence            012456778999999999 778999999999999986421            12222   25678899999999999999


Q ss_pred             hcCCCCCCceEEEcCCCCccCHHHHHHH
Q 025054          152 VDDPRTLNKTLYLRPPKNIYSFKELVAL  179 (258)
Q Consensus       152 l~~~~~~~~~~~l~g~~~~~t~~e~~~~  179 (258)
                      +.++...++.|++++ + ..+++|+.+.
T Consensus       185 l~~~~~~g~~~~i~~-g-~~~~~e~~~~  210 (219)
T 3dqp_A          185 VMTDHSIGKVISMHN-G-KTAIKEALES  210 (219)
T ss_dssp             HTCGGGTTEEEEEEE-C-SEEHHHHHHT
T ss_pred             HhCccccCcEEEeCC-C-CccHHHHHHH
Confidence            998876799999975 4 6999988763

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.81  E-value=1.2e-19  Score=151.65  Aligned_cols=181  Identities=17%  Similarity=0.199  Sum_probs=136.4

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCc-cEEEc-CCC---C
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNI-KRFFP-TEY---G   64 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~v-k~~v~-S~~---~   64 (258)
                      .+++++.+|++|.+++.+++.++|+|||+++...               +.++.+++++|++.+ + ++||+ |+.   |
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg  132 (336)
T 2hun_A           54 PRYTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRREN-PEVRFVHVSTDEVYG  132 (336)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEEEEGGGGC
T ss_pred             CceEEEEcCCCCHHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEeccHHHHC
Confidence            4688999999999999999999999999998531               567889999999987 5 79998 653   3


Q ss_pred             CCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-CCC--CCCCCCceEeccCCC
Q 025054           65 SNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-PGA--TAPPRENILFYGDGQ  133 (258)
Q Consensus        65 ~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~g~g~  133 (258)
                      ...    ++..+..+..+|..+|..+|+++++    .+++++++||+.+||.....-.. ...  .......+.++++++
T Consensus       133 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (336)
T 2hun_A          133 DILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGK  212 (336)
T ss_dssp             CCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC--
T ss_pred             CCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCC
Confidence            221    1112334556788899999998875    68999999999999976421000 000  001233467778888


Q ss_pred             ceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          134 PKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       134 ~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      +.+++++++|+|++++.+++.+. .++.|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus       213 ~~~~~i~v~Dva~~~~~~~~~~~-~g~~~~v~~-~~~~s~~e~~~~i~~~~g~~~  265 (336)
T 2hun_A          213 NVRDWLYVEDHVRAIELVLLKGE-SREIYNISA-GEEKTNLEVVKIILRLMGKGE  265 (336)
T ss_dssp             -CEEEEEHHHHHHHHHHHHHHCC-TTCEEEECC-SCEECHHHHHHHHHHHTTCCS
T ss_pred             ceeeeEEHHHHHHHHHHHHhCCC-CCCEEEeCC-CCcccHHHHHHHHHHHhCCCc
Confidence            89999999999999999987653 678999997 458999999999999999864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.81  E-value=8.6e-20  Score=153.79  Aligned_cols=187  Identities=12%  Similarity=0.087  Sum_probs=136.7

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCC--
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYG--   64 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~--   64 (258)
                      .+++++.+|++|++++.+++++  +|+|||+++...               +.++.+++++|++.+++++||+ |+..  
T Consensus        57 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vy  136 (357)
T 1rkx_A           57 DGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCY  136 (357)
T ss_dssp             TTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGB
T ss_pred             CceEEEEccccCHHHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHh
Confidence            4688999999999999999986  899999998421               5677899999998754899998 6642  


Q ss_pred             -CCC-----CCCCCCCCCccchhhHHHHHHHHHhC-------------CCCeEEEecCcccccCcCCCCCC--CCC--CC
Q 025054           65 -SNV-----DAGHPIEPAKSGYARKAKIRRAIEAE-------------GIPHTYVSCNCSFGFFLPTMAQP--GAT--AP  121 (258)
Q Consensus        65 -~~~-----~~~~~~~~~~~~~~~k~~~e~~l~~~-------------~~~~t~lr~~~~~~~~~~~~~~~--~~~--~~  121 (258)
                       ...     .+..+..+..+|..+|..+|++++..             +++++++||+.+||.........  .+.  ..
T Consensus       137 g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~  216 (357)
T 1rkx_A          137 DNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFE  216 (357)
T ss_dssp             CCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHH
T ss_pred             CCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHh
Confidence             111     11112335567788999999988652             89999999999999653210000  000  01


Q ss_pred             CCCceEeccCCCceeeeeccchHHHHHHHHhcC----CCCCCceEEEcCC-CCccCHHHHHHHHHHHhCCcceeEe
Q 025054          122 PRENILFYGDGQPKAIFNKEEDIATYTIKAVDD----PRTLNKTLYLRPP-KNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       122 ~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~----~~~~~~~~~l~g~-~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                      ....+. .+++++.++++|++|+|++++.++..    +...++.|++++. ++.+|+.|+++.+.+.+|.+.++..
T Consensus       217 ~g~~~~-~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~  291 (357)
T 1rkx_A          217 QSQPVI-IRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL  291 (357)
T ss_dssp             TTCCEE-CSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC
T ss_pred             cCCCEE-ECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcccc
Confidence            122333 34567889999999999999998874    2346789999862 2589999999999999998776543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.81  E-value=3.9e-20  Score=154.96  Aligned_cols=184  Identities=20%  Similarity=0.188  Sum_probs=134.9

Q ss_pred             cCceeEEeccCCC-HHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC-
Q 025054            4 MINCLIAQGDLHD-HESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS-   65 (258)
Q Consensus         4 ~~gv~~~~~D~~d-~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~-   65 (258)
                      ..+++++.+|++| .+.+.++++++|+|||+++...               +.++.+++++|++++  ++||+ |+.+. 
T Consensus        44 ~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~  121 (345)
T 2bll_A           44 HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVY  121 (345)
T ss_dssp             CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGG
T ss_pred             CCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHc
Confidence            3578999999998 4678889999999999987431               456789999999987  78888 66322 


Q ss_pred             --CCC----CCCCC-------CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC--C-------C-
Q 025054           66 --NVD----AGHPI-------EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP--G-------A-  118 (258)
Q Consensus        66 --~~~----~~~~~-------~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~--~-------~-  118 (258)
                        ...    +..+.       .+..+|..+|..+|++++.    .+++++++||+.+||+........  .       + 
T Consensus       122 g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~  201 (345)
T 2bll_A          122 GMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLI  201 (345)
T ss_dssp             BTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHH
T ss_pred             CCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHH
Confidence              111    11100       1223577799999998864    589999999999999764321000  0       0 


Q ss_pred             -CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054          119 -TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE  189 (258)
Q Consensus       119 -~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~  189 (258)
                       .......+.++++|++.+++++++|+|++++.+++.+.  ..++.|++++++..+|+.|+++.+.+.+|.+..
T Consensus       202 ~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~  275 (345)
T 2bll_A          202 LNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL  275 (345)
T ss_dssp             HHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT
T ss_pred             HHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcc
Confidence             00123346677888899999999999999999998763  467899999742379999999999999987644

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.81  E-value=5.7e-21  Score=161.78  Aligned_cols=179  Identities=15%  Similarity=0.081  Sum_probs=140.1

Q ss_pred             cccCce-eEEeccC-CCHHHHHHhhCCCcEEEEccCccc-----------hhchHHHHHHHHHhCCcc-EEEc-CCCCCC
Q 025054            2 LYMINC-LIAQGDL-HDHESLVKAIKPVDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIK-RFFP-TEYGSN   66 (258)
Q Consensus         2 l~~~gv-~~~~~D~-~d~~~l~~al~g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk-~~v~-S~~~~~   66 (258)
                      |.+.|. +++.+|. .|++++.++++++|+|||+++...           +.++++++++|+++| ++ +||+ |+.++.
T Consensus        20 L~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~   98 (369)
T 3st7_A           20 LTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQAT   98 (369)
T ss_dssp             HHHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGG
T ss_pred             HHhCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhc
Confidence            344565 9999999 999999999999999999997532           677899999999999 88 9998 765543


Q ss_pred             CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC-CCC--C--CCCCCCceEeccCCCceee
Q 025054           67 VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA-QPG--A--TAPPRENILFYGDGQPKAI  137 (258)
Q Consensus        67 ~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~-~~~--~--~~~~~~~~~~~g~g~~~~~  137 (258)
                      .        .++|..+|..+|+++++    .+++++++||+.+||....... ...  +  .......+. ++++++.++
T Consensus        99 ~--------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  169 (369)
T 3st7_A           99 Q--------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQ-VNDRNVELT  169 (369)
T ss_dssp             S--------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCC-CSCTTCEEE
T ss_pred             C--------CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeE-ecCCCeEEE
Confidence            2        45788899999999977    7899999999999997543210 000  0  001122233 356789999


Q ss_pred             eeccchHHHHHHHHhcCCCCC-CceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          138 FNKEEDIATYTIKAVDDPRTL-NKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       138 ~v~~~D~a~~~~~~l~~~~~~-~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      +++++|+|++++.++..+... ++.|+++++ +.+|+.|+++.+.+.+|.+.+..
T Consensus       170 ~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~-~~~s~~e~~~~~~~~~g~~~~~~  223 (369)
T 3st7_A          170 LNYVDDIVAEIKRAIEGTPTIENGVPTVPNV-FKVTLGEIVDLLYKFKQSRLDRT  223 (369)
T ss_dssp             EEEHHHHHHHHHHHHHTCCCEETTEECCSCC-EEEEHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEHHHHHHHHHHHHhCCcccCCceEEeCCC-CceeHHHHHHHHHHHhCCCcccc
Confidence            999999999999999987543 889999874 69999999999999999765443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.80  E-value=1e-19  Score=153.48  Aligned_cols=182  Identities=16%  Similarity=0.214  Sum_probs=139.3

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHh--CCcc-------EE
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEV--GNIK-------RF   58 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~--g~vk-------~~   58 (258)
                      .+++++.+|++|.+++.++++  ++|+|||+++...               +.++.+++++|++.  + ++       +|
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~i  128 (361)
T 1kew_A           50 NRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRF  128 (361)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEE
T ss_pred             CCeEEEECCCCCHHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceE
Confidence            368999999999999999998  9999999998531               56789999999998  8 88       99


Q ss_pred             Ec-CC---CCCCC--------------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC
Q 025054           59 FP-TE---YGSNV--------------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP  116 (258)
Q Consensus        59 v~-S~---~~~~~--------------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~  116 (258)
                      |+ |+   +|...              ++..+..+..+|..+|..+|.+++.    .+++++++||+.+||+........
T Consensus       129 v~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~  208 (361)
T 1kew_A          129 HHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLI  208 (361)
T ss_dssp             EEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHH
T ss_pred             EEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHH
Confidence            98 65   33221              1112234566788899999998876    489999999999999764210000


Q ss_pred             -CC--CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054          117 -GA--TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE  189 (258)
Q Consensus       117 -~~--~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~  189 (258)
                       ..  .......+.++++++..+++++++|+|++++.+++.+ ..|+.|++++ +..+|+.|+++.+.+.+|.+.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~-~~g~~~~v~~-~~~~s~~e~~~~i~~~~g~~~~  282 (361)
T 1kew_A          209 PLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG-KAGETYNIGG-HNEKKNLDVVFTICDLLDEIVP  282 (361)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECC-CCEEEHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC-CCCCEEEecC-CCeeeHHHHHHHHHHHhCCcCc
Confidence             00  0012234677788889999999999999999999765 3678999997 4589999999999999987543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.80  E-value=9.6e-19  Score=159.73  Aligned_cols=185  Identities=18%  Similarity=0.201  Sum_probs=136.1

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN   66 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~   66 (258)
                      .+++++.+|++|++++.++++  ++|+|||+++...               +.++.+++++|++++ +++||+ |+.++.
T Consensus        61 ~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vy  139 (699)
T 1z45_A           61 HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVY  139 (699)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGG
T ss_pred             CceEEEEcCCCCHHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHh
Confidence            468899999999999999998  8999999998532               467789999999999 999998 654321


Q ss_pred             -----------CCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCC------C-CC---
Q 025054           67 -----------VDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQP------G-AT---  119 (258)
Q Consensus        67 -----------~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~------~-~~---  119 (258)
                                 ..+..+..+..+|..+|..+|+++++      .+++++++||+.+||...+.+...      . ..   
T Consensus       140 g~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~  219 (699)
T 1z45_A          140 GDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYM  219 (699)
T ss_dssp             CCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHH
T ss_pred             CCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHH
Confidence                       01112223456778899999998875      589999999999998642211000      0 00   


Q ss_pred             ---CC-CCCceEecc------CCCceeeeeccchHHHHHHHHhcCC------CCCCceEEEcCCCCccCHHHHHHHHHHH
Q 025054          120 ---AP-PRENILFYG------DGQPKAIFNKEEDIATYTIKAVDDP------RTLNKTLYLRPPKNIYSFKELVALWEKK  183 (258)
Q Consensus       120 ---~~-~~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~------~~~~~~~~l~g~~~~~t~~e~~~~~~~~  183 (258)
                         .. ....+.++|      +|++.+++|+++|+|++++.++..+      ...+++|+++++ +.+|+.|+++.+.+.
T Consensus       220 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~-~~~s~~el~~~i~~~  298 (699)
T 1z45_A          220 AQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG-KGSTVFEVYHAFCKA  298 (699)
T ss_dssp             HHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS-CCEEHHHHHHHHHHH
T ss_pred             HHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCC-CCCcHHHHHHHHHHH
Confidence               00 112344555      6788999999999999999988642      224678999874 589999999999999


Q ss_pred             hCCcceeE
Q 025054          184 IGKTLEKI  191 (258)
Q Consensus       184 ~g~~~~~~  191 (258)
                      +|.++++.
T Consensus       299 ~g~~~~~~  306 (699)
T 1z45_A          299 SGIDLPYK  306 (699)
T ss_dssp             HTCCCCC-
T ss_pred             hCCCCCce
Confidence            99876654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.80  E-value=1.8e-19  Score=150.37  Aligned_cols=180  Identities=13%  Similarity=0.069  Sum_probs=135.8

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCc-cEEEc-CCC--
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNI-KRFFP-TEY--   63 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~v-k~~v~-S~~--   63 (258)
                      .+++++.+|++|.+++.+++++  +|+|||+++...               +.++.+++++|++++ + ++||+ |+.  
T Consensus        63 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v  141 (335)
T 1rpn_A           63 GDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEM  141 (335)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGG
T ss_pred             CceEEEECCCCCHHHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHH
Confidence            4689999999999999999986  699999998532               456789999999998 8 89998 653  


Q ss_pred             -CCCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-C-----CCCCCCCCCCC-ceE
Q 025054           64 -GSNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-M-----AQPGATAPPRE-NIL  127 (258)
Q Consensus        64 -~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~-----~~~~~~~~~~~-~~~  127 (258)
                       +...    .+..+..|..+|..+|..+|.++++    .+++++++||+.+||+.... +     ........... ...
T Consensus       142 ~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~  221 (335)
T 1rpn_A          142 FGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQEL  221 (335)
T ss_dssp             GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCE
T ss_pred             hCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceE
Confidence             2211    1222334556788899999999875    48999999999999864321 0     00000001111 234


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      .+|+|++.+++++++|+|++++.+++.+.  ++.|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus       222 ~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~  279 (335)
T 1rpn_A          222 RLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADDYVVAT-GVTTTVRDMCQIAFEHVGLDY  279 (335)
T ss_dssp             EESCTTCEEECEEHHHHHHHHHHHHHSSS--CCCEEECC-SCEEEHHHHHHHHHHTTTCCG
T ss_pred             EeCCCcceeceEEHHHHHHHHHHHHhcCC--CCEEEEeC-CCCccHHHHHHHHHHHhCCCc
Confidence            56888999999999999999999998763  58899987 458999999999999999864

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.79  E-value=1e-18  Score=144.79  Aligned_cols=178  Identities=12%  Similarity=0.111  Sum_probs=134.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCC---
Q 025054            6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS---   65 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~---   65 (258)
                      +++++.+|++|++++.++++  ++|+|||+++...              +.++.+++++|++++ +++||+ |+.+.   
T Consensus        40 ~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~  118 (317)
T 3ajr_A           40 GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGP  118 (317)
T ss_dssp             TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCT
T ss_pred             CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCC
Confidence            46788999999999999998  8999999998531              457789999999999 999998 65322   


Q ss_pred             CC-----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-CC------CCCCCCCceEec
Q 025054           66 NV-----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-PG------ATAPPRENILFY  129 (258)
Q Consensus        66 ~~-----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~  129 (258)
                      ..     .+..+..|..+|..+|..+|.+++.    .+++++++|++.+||+....... ..      ......+.+..+
T Consensus       119 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (317)
T 3ajr_A          119 ETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCY  198 (317)
T ss_dssp             TSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEEC
T ss_pred             CCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceee
Confidence            11     1112223566788899999988764    58999999999999964321000 00      001123456667


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCCC---CCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPRT---LNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~~---~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      +++++.+++++++|+|++++.++..+..   .++.|+++|  ..+|+.|+++.+.+.+|.
T Consensus       199 ~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~--~~~s~~e~~~~i~~~~~~  256 (317)
T 3ajr_A          199 LAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA--YTFTPSELYSKIKERIPE  256 (317)
T ss_dssp             SCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCS--EEECHHHHHHHHHTTCCS
T ss_pred             cCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCC--ccccHHHHHHHHHHHCCc
Confidence            7788899999999999999999987632   258999985  489999999999999983

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.79  E-value=2.9e-19  Score=149.08  Aligned_cols=177  Identities=14%  Similarity=0.100  Sum_probs=134.3

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCcc------------chhchHHHHHHHHHhCCccEEEc-CCCCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRT------------EVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDA   69 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~------------~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~   69 (258)
                      .+++++.+|++|.+++.++++  ++|+|||+++..            ++.++.+++++|++++ +++||+ |+.+.....
T Consensus        65 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~  143 (330)
T 2pzm_A           65 AGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRP  143 (330)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSC
T ss_pred             CCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCC
Confidence            368899999999999999999  999999999853            2467789999999999 999998 654321110


Q ss_pred             CC---CC----CCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcC-CCCCCCCCCCCCCceEeccCCCceeeeecc
Q 025054           70 GH---PI----EPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLP-TMAQPGATAPPRENILFYGDGQPKAIFNKE  141 (258)
Q Consensus        70 ~~---~~----~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~  141 (258)
                      ..   +.    .+..+|..+|..+|++++..++++++|||+.+||+... .+..........+. .+++++. ..+++++
T Consensus       144 ~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~  221 (330)
T 2pzm_A          144 ATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDM  221 (330)
T ss_dssp             SSSSBCTTCCCCCCSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEEH
T ss_pred             ccCCCCcCCCCCCCChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-EecceeH
Confidence            00   00    14567778999999999998999999999999987631 10000000001112 4456666 8899999


Q ss_pred             chHHH-HHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          142 EDIAT-YTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       142 ~D~a~-~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      +|+|+ +++.+++.+.  ++.|++++ ++.+|+.|+++.+.+.+|.+
T Consensus       222 ~Dva~~a~~~~~~~~~--g~~~~v~~-~~~~s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          222 SDFLAIADLSLQEGRP--TGVFNVST-GEGHSIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             HHHHHHHHHHTSTTCC--CEEEEESC-SCCEEHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHhhcCC--CCEEEeCC-CCCCCHHHHHHHHHHHhCCC
Confidence            99999 9999998764  88999997 46899999999999999987

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.79  E-value=3.4e-20  Score=153.08  Aligned_cols=173  Identities=11%  Similarity=0.043  Sum_probs=116.8

Q ss_pred             EeccCCCHHHHHHhhCC-----CcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCC---CCCC
Q 025054           10 AQGDLHDHESLVKAIKP-----VDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSNV   67 (258)
Q Consensus        10 ~~~D~~d~~~l~~al~g-----~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~~   67 (258)
                      +.+|++|.+.+.+++++     +|+|||+++...             +.++.+++++|++++ + +||+ |+.   +...
T Consensus        47 ~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~  124 (310)
T 1eq2_A           47 IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRT  124 (310)
T ss_dssp             CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCC
T ss_pred             eccccccHHHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCC
Confidence            56788889999999986     999999998532             456899999999999 8 9998 654   2211


Q ss_pred             ----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-CCC------CCCCCCceEeccCC
Q 025054           68 ----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-PGA------TAPPRENILFYGDG  132 (258)
Q Consensus        68 ----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~g~g  132 (258)
                          .+..+..|..+|..+|..+|+++++    .+++++++||+.+||+....... ...      .......+.++++|
T Consensus       125 ~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  204 (310)
T 1eq2_A          125 SDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGS  204 (310)
T ss_dssp             SCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC----------
T ss_pred             CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCC
Confidence                1111223456778899999999875    47999999999999976431000 000      00122345567788


Q ss_pred             Cc-eeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          133 QP-KAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       133 ~~-~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      ++ .+++++++|+|++++.+++.+.  ++.|++++ ++.+|+.|+++.+.+.+|.+
T Consensus       205 ~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          205 ENFKRDFVYVGDVADVNLWFLENGV--SGIFNLGT-GRAESFQAVADATLAYHKKG  257 (310)
T ss_dssp             ---CBCEEEHHHHHHHHHHHHHHCC--CEEEEESC-SCCBCHHHHHHHC-------
T ss_pred             CcceEccEEHHHHHHHHHHHHhcCC--CCeEEEeC-CCccCHHHHHHHHHHHcCCC
Confidence            88 8999999999999999998774  88999987 45899999999999999986

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.79  E-value=1.2e-19  Score=156.60  Aligned_cols=194  Identities=12%  Similarity=0.069  Sum_probs=143.1

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC----
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV----   67 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~----   67 (258)
                      .+++++.+|++|++++. ++.++|+|||+++...            +.++.+++++|++ + +++||+ |+.++..    
T Consensus       130 ~~v~~v~~Dl~d~~~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~  206 (427)
T 4f6c_A          130 SNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDI  206 (427)
T ss_dssp             TTEEEEEECC---CCCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECS
T ss_pred             CceEEEeCCCCCcccCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccC
Confidence            57999999999988888 8889999999998632            6778999999999 7 899998 6654400    


Q ss_pred             -------CCCC---CCCCCccchhhHHHHHHHHHh---CCCCeEEEecCcccccCcCCCCCCC-----C---C--CCCCC
Q 025054           68 -------DAGH---PIEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSFGFFLPTMAQPG-----A---T--APPRE  124 (258)
Q Consensus        68 -------~~~~---~~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~~~~~~~~~~~~-----~---~--~~~~~  124 (258)
                             .+..   +..+.+.|..+|..+|.++++   .|++++++|||.++|..........     +   .  ....+
T Consensus       207 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (427)
T 4f6c_A          207 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLD  286 (427)
T ss_dssp             SCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSS
T ss_pred             CCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcC
Confidence                   0011   122556778899999999987   7999999999999997654321100     0   0  00111


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHh
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQD  204 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  204 (258)
                      .++. +.++..+++++++|+|++++.++..+. .+++|+++++ +.+|+.|+++.+.+ +|    +..++.+++...+..
T Consensus       287 ~~~~-~~~~~~~~~v~v~DvA~ai~~~~~~~~-~g~~~~l~~~-~~~s~~el~~~i~~-~g----~~~~~~~~~~~~l~~  358 (427)
T 4f6c_A          287 CIGV-SMAEMPVDFSFVDTTARQIVALAQVNT-PQIIYHVLSP-NKMPVKSLLECVKR-KE----IELVSDESFNEILQK  358 (427)
T ss_dssp             EEEH-HHHTCEECCEEHHHHHHHHHHHTTSCC-CCSEEEESCS-CCEEHHHHHHHHHS-SC----CEEECHHHHHHHHHH
T ss_pred             CCCC-ccccceEEEeeHHHHHHHHHHHHcCCC-CCCEEEecCC-CCCcHHHHHHHHHH-cC----CcccCHHHHHHHHHh
Confidence            2222 346788999999999999999998876 8899999985 59999999999998 67    667788888887776


Q ss_pred             ccCcc
Q 025054          205 ASNED  209 (258)
Q Consensus       205 ~~~~~  209 (258)
                      .++++
T Consensus       359 ~~~~~  363 (427)
T 4f6c_A          359 QDMYE  363 (427)
T ss_dssp             TTCHH
T ss_pred             cCchh
Confidence            55443

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.79  E-value=8.3e-19  Score=148.00  Aligned_cols=186  Identities=15%  Similarity=0.122  Sum_probs=130.5

Q ss_pred             cCceeEEeccCCCHHHHHHhhCC---CcEEEEccCccc----------hhchHHHHHHHHHh--CCccEEE-------c-
Q 025054            4 MINCLIAQGDLHDHESLVKAIKP---VDVVISAVGRTE----------VEDQFKLIAAIKEV--GNIKRFF-------P-   60 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g---~d~Vi~~~~~~~----------~~~~~~li~aa~~~--g~vk~~v-------~-   60 (258)
                      ..+++++.+|++|.+++.+++++   +|+|||+++...          +.++.+++++|+++  + +++||       + 
T Consensus        47 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~  125 (364)
T 2v6g_A           47 DNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYM  125 (364)
T ss_dssp             SSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHH
T ss_pred             cCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEE
Confidence            35788999999999999999998   999999998531          67889999999998  7 99997       5 


Q ss_pred             CCC---CCCC------CCCCCCCC-CccchhhHHHHHHHHHhCC-CCeEEEecCcccccCcCCCCCC-----CCCCC---
Q 025054           61 TEY---GSNV------DAGHPIEP-AKSGYARKAKIRRAIEAEG-IPHTYVSCNCSFGFFLPTMAQP-----GATAP---  121 (258)
Q Consensus        61 S~~---~~~~------~~~~~~~~-~~~~~~~k~~~e~~l~~~~-~~~t~lr~~~~~~~~~~~~~~~-----~~~~~---  121 (258)
                      |+.   |...      .+..+..+ ..+|+.....++++.++.+ ++++++||+.+||+........     .....   
T Consensus       126 Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  205 (364)
T 2v6g_A          126 GPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKH  205 (364)
T ss_dssp             CCGGGTTTSCCCCSSBCTTSCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHH
T ss_pred             echhhccccccCCCCCCccccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHh
Confidence            553   3211      11111112 3455443333333333356 9999999999999754321110     00001   


Q ss_pred             CCCceEeccCCCc---eeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          122 PRENILFYGDGQP---KAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       122 ~~~~~~~~g~g~~---~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      .+..+.++|++++   .+++++++|+|++++.+++++...++.|+++++ +.+|+.|+++.+.+.+|.+....
T Consensus       206 ~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~  277 (364)
T 2v6g_A          206 EGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNG-DVFKWKHFWKVLAEQFGVECGEY  277 (364)
T ss_dssp             HTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCS-CCBCHHHHHHHHHHHHTCCBCCC
T ss_pred             cCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCC-CcCCHHHHHHHHHHHhCCCCCCC
Confidence            1223455777643   467788899999999999887556889999974 58999999999999999876543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.78  E-value=2.5e-19  Score=157.83  Aligned_cols=194  Identities=13%  Similarity=0.076  Sum_probs=145.4

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC----
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV----   67 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~----   67 (258)
                      .+++++.+|+.|++++. ++.++|+|||+++...            +.++++++++|++ + +++||+ |+.++..    
T Consensus       211 ~~v~~v~~Dl~d~~~l~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~  287 (508)
T 4f6l_B          211 SNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDI  287 (508)
T ss_dssp             TTEEEEEEBTTBCSSCC-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECT
T ss_pred             CceEEEecCCcccccCC-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCcc
Confidence            57999999999988877 8889999999998532            6788999999998 6 899998 7655400    


Q ss_pred             -------CCCCC---CCCCccchhhHHHHHHHHHh---CCCCeEEEecCcccccCcCCCCCCCC----------CCCCCC
Q 025054           68 -------DAGHP---IEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSFGFFLPTMAQPGA----------TAPPRE  124 (258)
Q Consensus        68 -------~~~~~---~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~~~~~~~~~~~~~----------~~~~~~  124 (258)
                             .+...   ..+.+.|..+|..+|+++++   .|++++++|||.++|...........          .....+
T Consensus       288 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~  367 (508)
T 4f6l_B          288 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLD  367 (508)
T ss_dssp             TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCS
T ss_pred             CCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcC
Confidence                   00111   12456788899999999987   79999999999999976443211000          001112


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHh
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQD  204 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  204 (258)
                      .++ .+++++.++|++++|+|++++.++..+. .+++|+++++ +.+|+.|+++.+.+..     +..++..++...+..
T Consensus       368 ~~~-~~~g~~~~~~v~v~DvA~ai~~~~~~~~-~~~~~nl~~~-~~~s~~el~~~i~~~~-----~~~~~~~~w~~~l~~  439 (508)
T 4f6l_B          368 CIG-VSMAEMPVDFSFVDTTARQIVALAQVNT-PQIIYHVLSP-NKMPVKSLLECVKRKE-----IELVSDESFNEILQK  439 (508)
T ss_dssp             EEE-TTGGGSEEECEEHHHHHHHHHHHTTBCC-SCSEEEESCS-CEEEHHHHHHHHHSSC-----CEEECHHHHHHHHHT
T ss_pred             CCC-CCccCceEEEEcHHHHHHHHHHHHhCCC-CCCEEEeCCC-CCCCHHHHHHHHHHcC-----CcccCHHHHHHHHHh
Confidence            222 2446889999999999999999998876 8899999985 5999999999999854     666778888887776


Q ss_pred             ccCcc
Q 025054          205 ASNED  209 (258)
Q Consensus       205 ~~~~~  209 (258)
                      .++++
T Consensus       440 ~~~~~  444 (508)
T 4f6l_B          440 QDMYE  444 (508)
T ss_dssp             TCCHH
T ss_pred             cCCcc
Confidence            65543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.78  E-value=4.5e-19  Score=142.01  Aligned_cols=173  Identities=17%  Similarity=0.147  Sum_probs=128.5

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------------------------hhchHHHHHHHHHhCCcc
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------------------------~~~~~~li~aa~~~g~vk   56 (258)
                      .+++++.+|++|.+++.++++++|+|||+++...                            +....+++++|++++ ++
T Consensus        48 ~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~  126 (253)
T 1xq6_A           48 GEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VK  126 (253)
T ss_dssp             CCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CS
T ss_pred             CCeeEEEecCCCHHHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CC
Confidence            3678999999999999999999999999987421                            346789999999999 99


Q ss_pred             EEEc-CCCCCCCCCCCCCCC--CccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCC
Q 025054           57 RFFP-TEYGSNVDAGHPIEP--AKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQ  133 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~--~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  133 (258)
                      +||+ |+.+..... .+..+  ...|..+|..+|.++++.+++++++|||.++++..... ... ...   ...++++  
T Consensus       127 ~iv~~SS~~~~~~~-~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~-~~~-~~~---~~~~~~~--  198 (253)
T 1xq6_A          127 HIVVVGSMGGTNPD-HPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR-ELL-VGK---DDELLQT--  198 (253)
T ss_dssp             EEEEEEETTTTCTT-CGGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS-CEE-EES---TTGGGGS--
T ss_pred             EEEEEcCccCCCCC-CccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh-hhh-ccC---CcCCcCC--
Confidence            9998 665543221 11101  12344589999999999999999999999999753221 000 000   0112221  


Q ss_pred             ceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCC--CccCHHHHHHHHHHHhCCc
Q 025054          134 PKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPK--NIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       134 ~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~--~~~t~~e~~~~~~~~~g~~  187 (258)
                       ...+++++|+|++++.++.++...++.|+++++.  +.+|+.|+++.+.+.+|++
T Consensus       199 -~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          199 -DTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             -SCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred             -CCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence             2468999999999999999876568899999753  3699999999999998864

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.78  E-value=7.3e-19  Score=138.08  Aligned_cols=160  Identities=19%  Similarity=0.199  Sum_probs=104.7

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCC--------
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDA--------   69 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~--------   69 (258)
                      .+++++.+|++|.++  ++++++|+|||+++...      +..+++++++|+++| ++|+|+ |+.+.....        
T Consensus        42 ~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~  118 (221)
T 3ew7_A           42 KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLE  118 (221)
T ss_dssp             SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-------------
T ss_pred             CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccc
Confidence            578999999999887  88999999999998742      678899999999998 999998 765442111        


Q ss_pred             CCCCCCCccchhhHHHHHHH--HH--hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHH
Q 025054           70 GHPIEPAKSGYARKAKIRRA--IE--AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIA  145 (258)
Q Consensus        70 ~~~~~~~~~~~~~k~~~e~~--l~--~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a  145 (258)
                      ..+..+...|..+|...|.+  ++  +.+++|++|||+.+|++. +....   .......+.+.+++.   .+++++|+|
T Consensus       119 ~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~-~~~~~---~~~~~~~~~~~~~~~---~~i~~~Dva  191 (221)
T 3ew7_A          119 SKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG-ERTGD---YQIGKDHLLFGSDGN---SFISMEDYA  191 (221)
T ss_dssp             ------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC----------------------------CCCHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCC-CccCc---eEeccccceecCCCC---ceEeHHHHH
Confidence            11112334455688888876  66  689999999999999872 11111   111222344444443   689999999


Q ss_pred             HHHHHHhcCCCCCCceEEEcCCCCccCHHH
Q 025054          146 TYTIKAVDDPRTLNKTLYLRPPKNIYSFKE  175 (258)
Q Consensus       146 ~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e  175 (258)
                      ++++.++++++..|+.|++++|. ..+.+|
T Consensus       192 ~~~~~~l~~~~~~g~~~~~~~~~-~~~~~~  220 (221)
T 3ew7_A          192 IAVLDEIERPNHLNEHFTVAGKL-EHHHHH  220 (221)
T ss_dssp             HHHHHHHHSCSCTTSEEECCC---------
T ss_pred             HHHHHHHhCccccCCEEEECCCC-cccccc
Confidence            99999999998889999999864 665544

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.78  E-value=6e-19  Score=147.87  Aligned_cols=180  Identities=17%  Similarity=0.203  Sum_probs=133.0

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC---
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS---   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~---   65 (258)
                      .+++++.+|+.|.     ++.++|+|||+++...               +.++.+++++|++.+ + +||+ |+.+.   
T Consensus        75 ~~~~~~~~D~~~~-----~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~  147 (343)
T 2b69_A           75 ENFELINHDVVEP-----LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGD  147 (343)
T ss_dssp             TTEEEEECCTTSC-----CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBS
T ss_pred             CceEEEeCccCCh-----hhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCC
Confidence            4688899998774     5789999999997531               456889999999999 7 7887 65322   


Q ss_pred             CC----CCC-----CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-C--CC--CCCCCCceE
Q 025054           66 NV----DAG-----HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-P--GA--TAPPRENIL  127 (258)
Q Consensus        66 ~~----~~~-----~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-~--~~--~~~~~~~~~  127 (258)
                      ..    .+.     .+..+...|..+|..+|++++.    .+++++++||+.+||+....... .  .+  .....+.+.
T Consensus       148 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (343)
T 2b69_A          148 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT  227 (343)
T ss_dssp             CSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEE
T ss_pred             CCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCce
Confidence            11    010     1222345577799999998754    58999999999999975421100 0  00  001233566


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      +++++++.+++++++|+|++++.+++.+  .++.|+++++ +.+|+.|+++.+.+.+|.+.++..+|
T Consensus       228 ~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p  291 (343)
T 2b69_A          228 VYGSGSQTRAFQYVSDLVNGLVALMNSN--VSSPVNLGNP-EEHTILEFAQLIKNLVGSGSEIQFLS  291 (343)
T ss_dssp             EESSSCCEEECEEHHHHHHHHHHHHTSS--CCSCEEESCC-CEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             EcCCCCeEEeeEeHHHHHHHHHHHHhcC--CCCeEEecCC-CCCcHHHHHHHHHHHhCCCCCceeCC
Confidence            7888899999999999999999999866  4788999974 58999999999999999887776655

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.78  E-value=4.9e-18  Score=141.93  Aligned_cols=187  Identities=17%  Similarity=0.227  Sum_probs=134.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC--
Q 025054            6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS--   65 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~--   65 (258)
                      +++++.+|++|++++.++++  ++|+|||+++...               +.++.+++++|++++ +++||+ |+...  
T Consensus        51 ~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g  129 (338)
T 1udb_A           51 HPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYG  129 (338)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC
T ss_pred             cceEEEccCCCHHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhC
Confidence            47889999999999999987  5999999997521               567789999999999 999998 65322  


Q ss_pred             -CC----CCCCCCCC-CccchhhHHHHHHHHHh----C-CCCeEEEecCcccccCcCCCCC--C----C-CC------CC
Q 025054           66 -NV----DAGHPIEP-AKSGYARKAKIRRAIEA----E-GIPHTYVSCNCSFGFFLPTMAQ--P----G-AT------AP  121 (258)
Q Consensus        66 -~~----~~~~~~~~-~~~~~~~k~~~e~~l~~----~-~~~~t~lr~~~~~~~~~~~~~~--~----~-~~------~~  121 (258)
                       ..    .+..+..+ ..+|..+|..+|++++.    . +++++++|++.+||........  .    . ..      ..
T Consensus       130 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~  209 (338)
T 1udb_A          130 DNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAV  209 (338)
T ss_dssp             SCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHH
T ss_pred             CCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHH
Confidence             11    11111112 45677899999998865    3 7999999999999863211100  0    0 00      00


Q ss_pred             -CCCceEecc------CCCceeeeeccchHHHHHHHHhcCCC-CC-CceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054          122 -PRENILFYG------DGQPKAIFNKEEDIATYTIKAVDDPR-TL-NKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       122 -~~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~~-~~-~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                       ....+.++|      +|++.+++||++|+|++++.+++.+. .. +++|++++ ++.+|+.|+++.+.+.+|.++++..
T Consensus       210 ~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~-~~~~s~~e~~~~i~~~~g~~~~~~~  288 (338)
T 1udb_A          210 GRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGA-GVGNSVLDVVNAFSKACGKPVNYHF  288 (338)
T ss_dssp             TSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESC-SCCEEHHHHHHHHHHHHTSCCCEEE
T ss_pred             hcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecC-CCceeHHHHHHHHHHHhCCCCccee
Confidence             112344443      56788999999999999999887531 23 47899986 4589999999999999998776655


Q ss_pred             cC
Q 025054          193 VT  194 (258)
Q Consensus       193 ~~  194 (258)
                      .+
T Consensus       289 ~~  290 (338)
T 1udb_A          289 AP  290 (338)
T ss_dssp             EC
T ss_pred             CC
Confidence            44

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.77  E-value=3.2e-19  Score=150.35  Aligned_cols=180  Identities=12%  Similarity=0.046  Sum_probs=133.6

Q ss_pred             EeccCCCHHHHHHhhC-----CCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCC---CCCC
Q 025054           10 AQGDLHDHESLVKAIK-----PVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSNV   67 (258)
Q Consensus        10 ~~~D~~d~~~l~~al~-----g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~~   67 (258)
                      +.+|++|.+++.++++     ++|+|||+++...             +.++.+++++|++++ + +||+ |+.   +...
T Consensus        94 ~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~  171 (357)
T 2x6t_A           94 IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRT  171 (357)
T ss_dssp             CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCS
T ss_pred             EeeecCcHHHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCC
Confidence            5688888999999987     5999999998531             567899999999999 8 8997 653   2211


Q ss_pred             ----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-CC------CCCCCCceEeccCC
Q 025054           68 ----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-GA------TAPPRENILFYGDG  132 (258)
Q Consensus        68 ----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~g~g  132 (258)
                          ++..+..|..+|..+|..+|+++++    .++++++|||+.+||+........ ..      .......+.+++++
T Consensus       172 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (357)
T 2x6t_A          172 SDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGS  251 (357)
T ss_dssp             SCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTG
T ss_pred             CCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCC
Confidence                1111223456778899999999875    479999999999999754310000 00      00122345667888


Q ss_pred             Cc-eeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc-ceeEecC
Q 025054          133 QP-KAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT-LEKIYVT  194 (258)
Q Consensus       133 ~~-~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~-~~~~~~~  194 (258)
                      +. .+++++++|+|++++.+++.+.  ++.|++++ ++.+|+.|+++.+.+.+|.+ +++...+
T Consensus       252 ~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~  312 (357)
T 2x6t_A          252 ENFKRDFVYVGDVADVNLWFLENGV--SGIFNLGT-GRAESFQAVADATLAYHKKGQIEYIPFP  312 (357)
T ss_dssp             GGCEECEEEHHHHHHHHHHHHHHCC--CEEEEESC-SCCEEHHHHHHHHHHHHTCCCCEEECCC
T ss_pred             CcceEccEEHHHHHHHHHHHHhcCC--CCeEEecC-CCcccHHHHHHHHHHHcCCCCceecCCC
Confidence            88 8999999999999999998764  88999987 45899999999999999987 4444433

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.77  E-value=7.7e-19  Score=146.67  Aligned_cols=176  Identities=16%  Similarity=0.083  Sum_probs=132.5

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC--
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV--   67 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~--   67 (258)
                      .+++++.+|++|.+++.+++++  +|+|||+++...            +.++.+++++|++++ +++||+ |+.+...  
T Consensus        66 ~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~  144 (333)
T 2q1w_A           66 PNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVK  144 (333)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSC
T ss_pred             CCceEEEEeCCCHHHHHHHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCC
Confidence            4788999999999999999998  999999997532            466889999999999 999998 6533211  


Q ss_pred             --CCCCCC----CCC-ccchhhHHHHHHHHHh-CCCCeEEEecCcccccCcCCCCCCCCC-CCCCCceEeccCCCceeee
Q 025054           68 --DAGHPI----EPA-KSGYARKAKIRRAIEA-EGIPHTYVSCNCSFGFFLPTMAQPGAT-APPRENILFYGDGQPKAIF  138 (258)
Q Consensus        68 --~~~~~~----~~~-~~~~~~k~~~e~~l~~-~~~~~t~lr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~g~~~~~~  138 (258)
                        ....+.    .|. .+|..+|..+|++++. .. +++++||+.+||+.........+. ....+. .+++ ++...++
T Consensus       145 ~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~  221 (333)
T 2q1w_A          145 PIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK-KCFV-TKARRDF  221 (333)
T ss_dssp             CCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC-CCEE-EECEECE
T ss_pred             cccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC-eeeC-CCceEee
Confidence              000000    244 6777899999999998 66 999999999999652100000000 000112 3455 6778899


Q ss_pred             eccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          139 NKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       139 v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      ++++|+|++++.+++.+.  ++.|++++ ++.+|+.|+++.+.+.+|.+
T Consensus       222 i~v~Dva~ai~~~~~~~~--g~~~~v~~-~~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          222 VFVKDLARATVRAVDGVG--HGAYHFSS-GTDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             EEHHHHHHHHHHHHTTCC--CEEEECSC-SCCEEHHHHHHHHHHHTTCS
T ss_pred             EEHHHHHHHHHHHHhcCC--CCEEEeCC-CCCccHHHHHHHHHHHhCCC
Confidence            999999999999998775  88999987 46899999999999999987

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.77  E-value=2e-19  Score=147.88  Aligned_cols=173  Identities=14%  Similarity=0.096  Sum_probs=128.9

Q ss_pred             EeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---CCCC-
Q 025054           10 AQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSNV-   67 (258)
Q Consensus        10 ~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~~-   67 (258)
                      +.+|++|.+++.+++++  +|+|||+++...               +.++.+++++|++++ + +||+ |+.   +... 
T Consensus        36 ~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~  113 (299)
T 1n2s_A           36 FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGD  113 (299)
T ss_dssp             SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTT
T ss_pred             ccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCC
Confidence            35899999999999986  999999997532               566899999999998 8 6887 553   2211 


Q ss_pred             ---CCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCC-CCCCCCCCCceEeccCCCceeeeeccch
Q 025054           68 ---DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQ-PGATAPPRENILFYGDGQPKAIFNKEED  143 (258)
Q Consensus        68 ---~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~g~~~~~~v~~~D  143 (258)
                         .+..+..|..+|..+|..+|+++++...+++++||+.+||.....+.. +.........+.++|  ++.+++++++|
T Consensus       114 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D  191 (299)
T 1n2s_A          114 IPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAEL  191 (299)
T ss_dssp             CCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHH
T ss_pred             CCCCCCCCCCCccHHHHHHHHHHHHHHHhCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec--CcccCCeeHHH
Confidence               112233455678889999999999877799999999999975331100 000001123344554  47899999999


Q ss_pred             HHHHHHHHhcCCC--C-CCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          144 IATYTIKAVDDPR--T-LNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       144 ~a~~~~~~l~~~~--~-~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      +|++++.+++++.  . .++.|+++++ +.+|++|+++.+.+.+|.+
T Consensus       192 va~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          192 LADCTAHAIRVALNKPEVAGLYHLVAG-GTTTWHDYAALVFDEARKA  237 (299)
T ss_dssp             HHHHHHHHHHHHHHCGGGCEEEECCCB-SCEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccccCceEEEeCC-CCCCHHHHHHHHHHHhCCC
Confidence            9999999998762  2 4889999974 5899999999999999876

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.77  E-value=9.9e-19  Score=144.75  Aligned_cols=181  Identities=10%  Similarity=0.023  Sum_probs=121.4

Q ss_pred             EEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC---
Q 025054            9 IAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV---   67 (258)
Q Consensus         9 ~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~---   67 (258)
                      ++.+|++|++++.+++++  +|+|||+++...               +.++.+++++|++.+ + +||+ |+.....   
T Consensus        41 ~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~  118 (315)
T 2ydy_A           41 FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTN  118 (315)
T ss_dssp             -----------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSS
T ss_pred             eEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCC
Confidence            456899999999999985  899999997531               567899999999999 7 8887 6532211   


Q ss_pred             ---CCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcC---CCCCCCCC-CC-CCCceEeccCCCceeeee
Q 025054           68 ---DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLP---TMAQPGAT-AP-PRENILFYGDGQPKAIFN  139 (258)
Q Consensus        68 ---~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~---~~~~~~~~-~~-~~~~~~~~g~g~~~~~~v  139 (258)
                         .+..+..+..+|..+|..+|++++..++++++|||+.+||+...   .+...... .. ....+.+.  +++.++++
T Consensus       119 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i  196 (315)
T 2ydy_A          119 PPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPT  196 (315)
T ss_dssp             CSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCE
T ss_pred             CCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcE
Confidence               11122345567778999999999998899999999999986543   11100000 01 22233343  46778999


Q ss_pred             ccchHHHHHHHHhcCC---CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce-eEecC
Q 025054          140 KEEDIATYTIKAVDDP---RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE-KIYVT  194 (258)
Q Consensus       140 ~~~D~a~~~~~~l~~~---~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~-~~~~~  194 (258)
                      +++|+|++++.++.++   ...++.|+++++ +.+|+.|+++.+.+.+|.+.+ +..++
T Consensus       197 ~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~  254 (315)
T 2ydy_A          197 HVKDVATVCRQLAEKRMLDPSIKGTFHWSGN-EQMTKYEMACAIADAFNLPSSHLRPIT  254 (315)
T ss_dssp             EHHHHHHHHHHHHHHHHTCTTCCEEEECCCS-CCBCHHHHHHHHHHHTTCCCTTEEEEC
T ss_pred             EHHHHHHHHHHHHHhhccccCCCCeEEEcCC-CcccHHHHHHHHHHHhCCChhheeccc
Confidence            9999999999998753   246889999974 599999999999999998754 44444

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.77  E-value=1.1e-18  Score=146.38  Aligned_cols=168  Identities=14%  Similarity=0.104  Sum_probs=129.8

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVD   68 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~   68 (258)
                      .+++++.+|++|.+++.++++++|+|||+++...               +.++.+++++|+++| +++||+ |+....  
T Consensus        70 ~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~--  146 (344)
T 2gn4_A           70 PRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAA--  146 (344)
T ss_dssp             TTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS--
T ss_pred             CCEEEEECCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccC--
Confidence            5789999999999999999999999999998532               466789999999999 999999 764322  


Q ss_pred             CCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC-ceEeccCCCceeeeec
Q 025054           69 AGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE-NILFYGDGQPKAIFNK  140 (258)
Q Consensus        69 ~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~g~~~~~~v~  140 (258)
                           .|.++|..+|..+|.+++.       .+++++++|||.+||.....+..+......+. .+.+. +++..++|++
T Consensus       147 -----~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~  220 (344)
T 2gn4_A          147 -----NPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-DIRMTRFWIT  220 (344)
T ss_dssp             -----SCCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-CTTCEEEEEC
T ss_pred             -----CCccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-CCCeEEeeEE
Confidence                 2456788899999999875       46999999999999964321100000001122 34554 6778889999


Q ss_pred             cchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHh
Q 025054          141 EEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI  184 (258)
Q Consensus       141 ~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~  184 (258)
                      ++|+|++++.+++.+. .+++|++.++  .+|+.|+++.+.+.+
T Consensus       221 v~D~a~~v~~~l~~~~-~g~~~~~~~~--~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          221 LDEGVSFVLKSLKRMH-GGEIFVPKIP--SMKMTDLAKALAPNT  261 (344)
T ss_dssp             HHHHHHHHHHHHHHCC-SSCEEEECCC--EEEHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHHhhcc-CCCEEecCCC--cEEHHHHHHHHHHhC
Confidence            9999999999998753 5778988863  699999999998754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.75  E-value=3.8e-18  Score=144.69  Aligned_cols=182  Identities=16%  Similarity=0.120  Sum_probs=135.5

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCc---cEEEc-CCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNI---KRFFP-TEY   63 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~v---k~~v~-S~~   63 (258)
                      .+++++.+|++|.+++.+++++  +|+|||+++...               +.++.+++++|++.+ +   ++||+ |+.
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~  157 (375)
T 1t2a_A           79 GNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTS  157 (375)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEG
T ss_pred             CCceEEEccCCCHHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecch
Confidence            4688999999999999999986  699999998531               457789999999998 8   89998 653


Q ss_pred             ---CCCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-CC-----CCCCCCCCC-Cc
Q 025054           64 ---GSNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-MA-----QPGATAPPR-EN  125 (258)
Q Consensus        64 ---~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~~-----~~~~~~~~~-~~  125 (258)
                         +...    ++..+..+..+|..+|..+|.+++.    .+++++++|++.+||+.... +.     ......... ..
T Consensus       158 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~  237 (375)
T 1t2a_A          158 ELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLE  237 (375)
T ss_dssp             GGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCS
T ss_pred             hhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCc
Confidence               2211    1122233556777899999998865    48999999999988864321 00     000000011 12


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCccee
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEK  190 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~  190 (258)
                      ...+|++++.+++++++|+|++++.+++.+.  ++.|++++ ++.+|+.|+++.+.+.+|.+.++
T Consensus       238 ~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~  299 (375)
T 1t2a_A          238 CFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE--PEDFVIAT-GEVHSVREFVEKSFLHIGKTIVW  299 (375)
T ss_dssp             CEEESCTTCEECCEEHHHHHHHHHHHHHSSS--CCCEEECC-SCCEEHHHHHHHHHHHTTCCEEE
T ss_pred             eeEeCCCCceeeeEEHHHHHHHHHHHHhcCC--CceEEEeC-CCcccHHHHHHHHHHHhCCCccc
Confidence            3456888999999999999999999998763  57899987 45899999999999999987654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.73  E-value=9.5e-18  Score=141.95  Aligned_cols=183  Identities=15%  Similarity=0.157  Sum_probs=136.0

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCc---cEEEc-CCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNI---KRFFP-TEY   63 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~v---k~~v~-S~~   63 (258)
                      .+++++.+|++|.+++.+++++  +|+|||+++...               +.++.+++++|++.+ +   ++||+ |+.
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~  133 (372)
T 1db3_A           55 PKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTS  133 (372)
T ss_dssp             CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEG
T ss_pred             CceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCCh
Confidence            4688999999999999999986  699999997521               457889999999998 8   79998 553


Q ss_pred             ---CCCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-C-----CCCCCCCCCCC-c
Q 025054           64 ---GSNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-M-----AQPGATAPPRE-N  125 (258)
Q Consensus        64 ---~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~-----~~~~~~~~~~~-~  125 (258)
                         +...    .+..+..+..+|..+|..+|.+++.    .+++++++|+..+||+.... +     .........+. .
T Consensus       134 ~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~  213 (372)
T 1db3_A          134 ELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLES  213 (372)
T ss_dssp             GGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCC
T ss_pred             hhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCC
Confidence               3211    1122334566788899999998865    48999999999888764321 0     00000000111 2


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      ...+|++++.+++++++|+|++++.+++.+.  ++.|++++ ++.+|+.|+++.+.+.+|.+.++.
T Consensus       214 ~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~  276 (372)
T 1db3_A          214 CLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ--PEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRFE  276 (372)
T ss_dssp             CEEESCTTCEECCEEHHHHHHHHHHTTSSSS--CCCEEECC-CCCEEHHHHHHHHHHTTTEEEEEE
T ss_pred             ceeecCCCceeeeeEHHHHHHHHHHHHhcCC--CceEEEcC-CCceeHHHHHHHHHHHhCCCcccc
Confidence            3456888999999999999999999998763  57899987 468999999999999999866543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.73  E-value=2.1e-17  Score=138.20  Aligned_cols=182  Identities=12%  Similarity=0.093  Sum_probs=135.6

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCc-cEEEc-CCC---
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNI-KRFFP-TEY---   63 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~v-k~~v~-S~~---   63 (258)
                      +++++.+|++|.+++.+++++  +|+|||+++...               +.++.+++++|++.+ + ++||+ |+.   
T Consensus        53 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vy  131 (345)
T 2z1m_A           53 DVKIIHMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMF  131 (345)
T ss_dssp             TEEECCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGG
T ss_pred             ceeEEECCCCCHHHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhc
Confidence            688999999999999999986  599999998531               466899999999988 8 89998 653   


Q ss_pred             CCCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-CC-C-C-CCC--CCCC-CceEe
Q 025054           64 GSNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-MA-Q-P-GAT--APPR-ENILF  128 (258)
Q Consensus        64 ~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~~-~-~-~~~--~~~~-~~~~~  128 (258)
                      |...    .+..+..+..+|..+|..+|.+++.    .+++++++|+...+++.... .. . . ...  ...+ ....+
T Consensus       132 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (345)
T 2z1m_A          132 GKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLV  211 (345)
T ss_dssp             CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEE
T ss_pred             CCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeee
Confidence            3211    1122334556788899999998865    38999999999888864321 00 0 0 000  0011 12335


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      ++++++.+++++++|+|++++.+++.+.  ++.|++++ ++.+|++|+++.+.+.+|.+.++.
T Consensus       212 ~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~  271 (345)
T 2z1m_A          212 LGNLNAKRDWGYAPEYVEAMWLMMQQPE--PDDYVIAT-GETHTVREFVEKAAKIAGFDIEWV  271 (345)
T ss_dssp             ESCTTCEECCEEHHHHHHHHHHHHTSSS--CCCEEECC-SCCEEHHHHHHHHHHHTTCCEEEE
T ss_pred             eCCCCceeeeEEHHHHHHHHHHHHhCCC--CceEEEeC-CCCccHHHHHHHHHHHhCCCcccc
Confidence            6778889999999999999999998763  57899987 468999999999999999876644

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.73  E-value=9.8e-17  Score=124.42  Aligned_cols=150  Identities=13%  Similarity=0.112  Sum_probs=113.6

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCC
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIE   74 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~   74 (258)
                      ..+++++.+|++|++++.++++++|+|||+++...        +...++++++|++++ +++||+ |+.+..........
T Consensus        45 ~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~  123 (206)
T 1hdo_A           45 PRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPP  123 (206)
T ss_dssp             CCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCG
T ss_pred             CCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCcccccc
Confidence            45789999999999999999999999999998532        567899999999999 999998 77654322111001


Q ss_pred             CCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCce-eeeeccchHHHHHHHHhc
Q 025054           75 PAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPK-AIFNKEEDIATYTIKAVD  153 (258)
Q Consensus        75 ~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~v~~~D~a~~~~~~l~  153 (258)
                      +..+|..+|..+|+++++.+++++++||+.++......  .+         ....+  ..+ .++++++|+|++++.+++
T Consensus       124 ~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~~~~~~~~~--~~---------~~~~~--~~~~~~~i~~~Dva~~~~~~~~  190 (206)
T 1hdo_A          124 RLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG--AY---------TVTLD--GRGPSRVISKHDLGHFMLRCLT  190 (206)
T ss_dssp             GGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCCCS--CC---------EEESS--SCSSCSEEEHHHHHHHHHHTTS
T ss_pred             cchhHHHHHHHHHHHHHhCCCCEEEEeCCcccCCCCCc--ce---------Eeccc--CCCCCCccCHHHHHHHHHHHhc
Confidence            34567789999999999999999999999974332111  00         00111  111 479999999999999999


Q ss_pred             CCCCCCceEEEcCC
Q 025054          154 DPRTLNKTLYLRPP  167 (258)
Q Consensus       154 ~~~~~~~~~~l~g~  167 (258)
                      ++...|+.|+++|+
T Consensus       191 ~~~~~g~~~~i~~g  204 (206)
T 1hdo_A          191 TDEYDGHSTYPSHQ  204 (206)
T ss_dssp             CSTTTTCEEEEECC
T ss_pred             Cccccccceeeecc
Confidence            88667899999863

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.73  E-value=2.5e-17  Score=144.01  Aligned_cols=196  Identities=13%  Similarity=0.050  Sum_probs=137.3

Q ss_pred             CceeEEeccCC------CHHHHHHhhCCCcEEEEccCcc-----------chhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054            5 INCLIAQGDLH------DHESLVKAIKPVDVVISAVGRT-----------EVEDQFKLIAAIKEVGNIKRFFP-TEYGSN   66 (258)
Q Consensus         5 ~gv~~~~~D~~------d~~~l~~al~g~d~Vi~~~~~~-----------~~~~~~~li~aa~~~g~vk~~v~-S~~~~~   66 (258)
                      .+++++.+|++      |.+.+.++++++|+|||+++..           ++.++.+++++|++.+ +++||+ |+.+..
T Consensus       140 ~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~  218 (478)
T 4dqv_A          140 DRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVG  218 (478)
T ss_dssp             TTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGG
T ss_pred             CceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhc
Confidence            57999999998      7778999999999999999863           1678899999999999 999998 663321


Q ss_pred             C---CC----CCCCCC-----------CccchhhHHHHHHHHHh----CCCCeEEEecCcccccCc--CCCCCCCCC---
Q 025054           67 V---DA----GHPIEP-----------AKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFL--PTMAQPGAT---  119 (258)
Q Consensus        67 ~---~~----~~~~~~-----------~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~--~~~~~~~~~---  119 (258)
                      .   ..    .....+           .+.|..+|..+|.++++    .+++++++|||.+||...  .......+.   
T Consensus       219 ~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l  298 (478)
T 4dqv_A          219 AAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRM  298 (478)
T ss_dssp             TTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHH
T ss_pred             CccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHH
Confidence            1   10    000001           12377899999999976    489999999999999632  111000000   


Q ss_pred             ---CCCCCceE--ecc---C---CCceeeeeccchHHHHHHHHhcC----CCCCCceEEEcCCCCc--cCHHHHHHHHHH
Q 025054          120 ---APPRENIL--FYG---D---GQPKAIFNKEEDIATYTIKAVDD----PRTLNKTLYLRPPKNI--YSFKELVALWEK  182 (258)
Q Consensus       120 ---~~~~~~~~--~~g---~---g~~~~~~v~~~D~a~~~~~~l~~----~~~~~~~~~l~g~~~~--~t~~e~~~~~~~  182 (258)
                         ....+.++  +++   +   +++.+++|+++|+|++++.++..    +...+++|+++++. .  +|++|+++.+.+
T Consensus       299 ~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~-~~~~s~~el~~~l~~  377 (478)
T 4dqv_A          299 VLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH-DDGIGLDEYVDWLIE  377 (478)
T ss_dssp             HHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCC-CSSCSHHHHHHHHHH
T ss_pred             HHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCC-CCCcCHHHHHHHHHH
Confidence               00011111  111   1   26788999999999999999876    44578899999864 6  999999999999


Q ss_pred             HhCCcceeEecCHHHHHHHHHh
Q 025054          183 KIGKTLEKIYVTEDQILQMIQD  204 (258)
Q Consensus       183 ~~g~~~~~~~~~~~~~~~~~~~  204 (258)
                      . |.+.+.. ++..++...+..
T Consensus       378 ~-g~~~~~i-~~~~~w~~~l~~  397 (478)
T 4dqv_A          378 A-GYPIRRI-DDFAEWLQRFEA  397 (478)
T ss_dssp             T-TCSCEEE-SSHHHHHHHHHH
T ss_pred             c-CCCcccC-CCHHHHHHHHHH
Confidence            5 7766543 255556666544

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.72  E-value=5e-18  Score=154.00  Aligned_cols=181  Identities=20%  Similarity=0.209  Sum_probs=132.9

Q ss_pred             CceeEEeccCCCHHH-HHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC--
Q 025054            5 INCLIAQGDLHDHES-LVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS--   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~-l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~--   65 (258)
                      .+++++.+|++|.++ +.++++++|+|||+++...               +.++.+++++|++++  ++||+ |+.++  
T Consensus       360 ~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg  437 (660)
T 1z7e_A          360 PHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYG  437 (660)
T ss_dssp             TTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGB
T ss_pred             CceEEEECCCCCcHHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcC
Confidence            578999999998765 7888999999999987431               467889999999987  78998 76432  


Q ss_pred             -CCC----CCCC-------CCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCC-----CCCCC------
Q 025054           66 -NVD----AGHP-------IEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTM-----AQPGA------  118 (258)
Q Consensus        66 -~~~----~~~~-------~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~-----~~~~~------  118 (258)
                       ...    +..+       ..+.+.|..+|..+|.++++    .+++++++||+.+||......     .....      
T Consensus       438 ~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~  517 (660)
T 1z7e_A          438 MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL  517 (660)
T ss_dssp             TCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHH
T ss_pred             CCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHH
Confidence             111    1110       02233577799999998854    589999999999999764210     00000      


Q ss_pred             CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      .......+.++++|++.+++++++|+|++++.+++.+.  ..++.|++++++..+|+.|+++.+.+.+|.+
T Consensus       518 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T 1z7e_A          518 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH  588 (660)
T ss_dssp             HHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHC
T ss_pred             HHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCC
Confidence            00123345677888899999999999999999998764  3578999986322799999999999999864

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.71  E-value=2.1e-17  Score=140.36  Aligned_cols=179  Identities=14%  Similarity=0.101  Sum_probs=134.2

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCcc-----EEEc-CC
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIK-----RFFP-TE   62 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk-----~~v~-S~   62 (258)
                      +++++.+|++|.+++.+++++  +|+|||+++...               +.++.+++++|++.+ ++     +||+ |+
T Consensus        84 ~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS  162 (381)
T 1n7h_A           84 LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGS  162 (381)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEE
T ss_pred             ceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCc
Confidence            789999999999999999986  599999998531               457889999999998 88     9998 65


Q ss_pred             C---CCCC---CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-C-----CCCCCCCCCCC-c
Q 025054           63 Y---GSNV---DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-M-----AQPGATAPPRE-N  125 (258)
Q Consensus        63 ~---~~~~---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~-----~~~~~~~~~~~-~  125 (258)
                      .   +...   .+..+..+..+|..+|..+|.+++.    .+++++++|++.++|+.... +     ........... .
T Consensus       163 ~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~  242 (381)
T 1n7h_A          163 SEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQT  242 (381)
T ss_dssp             GGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCC
T ss_pred             HHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCC
Confidence            3   2211   1122334556788899999998875    38999999999888864321 0     00000000111 2


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      ...+|+++..+++++++|+|++++.+++.+.  ++.|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus       243 ~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~  302 (381)
T 1n7h_A          243 KLFLGNLQASRDWGFAGDYVEAMWLMLQQEK--PDDYVVAT-EEGHTVEEFLDVSFGYLGLNW  302 (381)
T ss_dssp             CEEESCTTCEEECEEHHHHHHHHHHHHTSSS--CCEEEECC-SCEEEHHHHHHHHHHHTTCCG
T ss_pred             eEEeCCCCceeeeEEHHHHHHHHHHHHhCCC--CCeEEeeC-CCCCcHHHHHHHHHHHcCCCc
Confidence            3356888899999999999999999998763  58999997 468999999999999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.71  E-value=5.3e-18  Score=141.75  Aligned_cols=179  Identities=15%  Similarity=0.110  Sum_probs=127.9

Q ss_pred             CceeEE-eccCCCHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHH-hCCccEEEc-CCCCCCC-C
Q 025054            5 INCLIA-QGDLHDHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKE-VGNIKRFFP-TEYGSNV-D   68 (258)
Q Consensus         5 ~gv~~~-~~D~~d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~-~g~vk~~v~-S~~~~~~-~   68 (258)
                      .+++++ .+|++|.+++.++++++|+|||+++...            +.++.+++++|++ .+ +++||+ |+.++.. .
T Consensus        61 ~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~  139 (342)
T 1y1p_A           61 GRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIP  139 (342)
T ss_dssp             TTEEEEECSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCC
T ss_pred             CceEEEEecCCcChHHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCC
Confidence            468888 8999999999999999999999998532            5778999999985 67 999998 6643211 0


Q ss_pred             C----------CC----------------CCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCC
Q 025054           69 A----------GH----------------PIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQP  116 (258)
Q Consensus        69 ~----------~~----------------~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~  116 (258)
                      .          ..                +..+..+|..+|..+|.+++.      .+++++++||+.+||+........
T Consensus       140 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~  219 (342)
T 1y1p_A          140 KPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQS  219 (342)
T ss_dssp             CTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCC
T ss_pred             CCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCC
Confidence            0          00                011234577799999998865      278899999999999764321100


Q ss_pred             CC------CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          117 GA------TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       117 ~~------~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      ..      .........+++++ ..+++++++|+|++++.++..+...++.+...|  ..+|+.|+++.+.+.+|.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g--~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          220 GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTA--GTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECC--EEECHHHHHHHHHHHCTTS
T ss_pred             ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCcccCCceEEEeC--CCCCHHHHHHHHHHHCCCc
Confidence            00      00112223345554 678899999999999999987644565665553  5899999999999999874

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.69  E-value=1.2e-15  Score=121.05  Aligned_cols=152  Identities=18%  Similarity=0.196  Sum_probs=111.0

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCC-----CCCC
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHP-----IEPA   76 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~-----~~~~   76 (258)
                      ..+++++.+|++|++++.++++++|+|||+++... ....+++++++++++ ++|||+ |+.+........     ....
T Consensus        66 ~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~  144 (236)
T 3qvo_A           66 PTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVI  144 (236)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTT-CCEEEEECCCCC----------------
T ss_pred             cCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcc
Confidence            45789999999999999999999999999998754 346789999999999 999998 775543221110     0011


Q ss_pred             ccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054           77 KSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus        77 ~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      ..++..+..+|+++++.++++++||||++++.....+           . ...........+++.+|+|++++.++.++.
T Consensus       145 ~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~~~~~~~-----------~-~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~  212 (236)
T 3qvo_A          145 GEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDY-----------E-LTSRNEPFKGTIVSRKSVAALITDIIDKPE  212 (236)
T ss_dssp             CGGGHHHHHHHHHHHTSCSEEEEEEECEEECCSCCCC-----------E-EECTTSCCSCSEEEHHHHHHHHHHHHHSTT
T ss_pred             cchHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCcce-----------E-EeccCCCCCCcEECHHHHHHHHHHHHcCcc
Confidence            2345677888999999999999999999988643211           0 011111111258999999999999999885


Q ss_pred             -CCCceEEEcCCC
Q 025054          157 -TLNKTLYLRPPK  168 (258)
Q Consensus       157 -~~~~~~~l~g~~  168 (258)
                       ..++.+++++|+
T Consensus       213 ~~~g~~~~i~~~~  225 (236)
T 3qvo_A          213 KHIGENIGINQPG  225 (236)
T ss_dssp             TTTTEEEEEECSS
T ss_pred             cccCeeEEecCCC
Confidence             679999999754

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.68  E-value=6.5e-16  Score=121.41  Aligned_cols=152  Identities=12%  Similarity=0.121  Sum_probs=113.9

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCC-----CCCc
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPI-----EPAK   77 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~-----~~~~   77 (258)
                      ..+++++.+|++|++++.++++++|+|||+++..++. .+++++++++.| ++|||+ |+.+.........     ....
T Consensus        51 ~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~  128 (221)
T 3r6d_A           51 HERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESGSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLP  128 (221)
T ss_dssp             STTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCHHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSC
T ss_pred             CCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCChh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccccccccc
Confidence            4578999999999999999999999999999987766 999999999999 999998 7765543211000     0011


Q ss_pred             -cchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHh--cC
Q 025054           78 -SGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAV--DD  154 (258)
Q Consensus        78 -~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l--~~  154 (258)
                       +|..+|..+|+++++.+++|++||||++++......  .        . ...........+++.+|+|++++.++  ++
T Consensus       129 ~~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~--~--------~-~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~  197 (221)
T 3r6d_A          129 ISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTD--Y--------E-LIPEGAQFNDAQVSREAVVKAIFDILHAAD  197 (221)
T ss_dssp             HHHHHHHHHHHHHHHHSCSEEEEEEECEEECCTTCCC--C--------E-EECTTSCCCCCEEEHHHHHHHHHHHHTCSC
T ss_pred             cHHHHHHHHHHHHHHhCCCCEEEEechhhcCCCCCcc--e--------e-eccCCccCCCceeeHHHHHHHHHHHHHhcC
Confidence             677799999999999999999999999988622110  0        0 00111111123789999999999999  87


Q ss_pred             CC-CCCceEEEcCCC
Q 025054          155 PR-TLNKTLYLRPPK  168 (258)
Q Consensus       155 ~~-~~~~~~~l~g~~  168 (258)
                      +. ..++.+.+.+|+
T Consensus       198 ~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          198 ETPFHRTSIGVGEPG  212 (221)
T ss_dssp             CGGGTTEEEEEECTT
T ss_pred             hhhhhcceeeecCCC
Confidence            74 578889888654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.68  E-value=8.8e-17  Score=130.23  Aligned_cols=170  Identities=14%  Similarity=-0.043  Sum_probs=124.7

Q ss_pred             EeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCC---C-
Q 025054           10 AQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN---V-   67 (258)
Q Consensus        10 ~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~---~-   67 (258)
                      +.+|++|++++.+++++  +|+|||+++...               +.+..+++++|++.+ + +||+ |+.+..   . 
T Consensus        39 ~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~  116 (273)
T 2ggs_A           39 YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKG  116 (273)
T ss_dssp             EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSC
T ss_pred             ceeccCCHHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCC
Confidence            67899999999999986  999999998532               456889999999988 7 7887 654321   1 


Q ss_pred             --CCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHH
Q 025054           68 --DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIA  145 (258)
Q Consensus        68 --~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a  145 (258)
                        .+..+..+..+|..+|..+|.+++.  ++++++||+.+||.. +..............+.+.++   ..++++++|+|
T Consensus       117 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~~iR~~~v~G~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva  190 (273)
T 2ggs_A          117 NYKEEDIPNPINYYGLSKLLGETFALQ--DDSLIIRTSGIFRNK-GFPIYVYKTLKEGKTVFAFKG---YYSPISARKLA  190 (273)
T ss_dssp             SBCTTSCCCCSSHHHHHHHHHHHHHCC--TTCEEEEECCCBSSS-SHHHHHHHHHHTTCCEEEESC---EECCCBHHHHH
T ss_pred             CcCCCCCCCCCCHHHHHHHHHHHHHhC--CCeEEEecccccccc-HHHHHHHHHHHcCCCEEeecC---CCCceEHHHHH
Confidence              1111223456677899999999988  899999999999721 100000000011223445543   78899999999


Q ss_pred             HHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054          146 TYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI  191 (258)
Q Consensus       146 ~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~  191 (258)
                      ++++.+++++  .++.|+++|  +.+|++|+++.+.+.+|.+.++.
T Consensus       191 ~~i~~~~~~~--~~g~~~i~~--~~~s~~e~~~~~~~~~g~~~~~~  232 (273)
T 2ggs_A          191 SAILELLELR--KTGIIHVAG--ERISRFELALKIKEKFNLPGEVK  232 (273)
T ss_dssp             HHHHHHHHHT--CCEEEECCC--CCEEHHHHHHHHHHHTTCCSCEE
T ss_pred             HHHHHHHhcC--cCCeEEECC--CcccHHHHHHHHHHHhCCChhhc
Confidence            9999999876  366899986  59999999999999999887654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.68  E-value=1.2e-16  Score=129.29  Aligned_cols=173  Identities=16%  Similarity=0.107  Sum_probs=129.8

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-----------hhchHHHHHHHHHhCCccEEEc-CCCCCC---C--
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN---V--   67 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~---~--   67 (258)
                      .+++++.+|++|++++.++++++|+|||+++...           +.+..+++++|++++ ++|||+ |+....   .  
T Consensus        42 ~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~  120 (267)
T 3ay3_A           42 AHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRT  120 (267)
T ss_dssp             TTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTT
T ss_pred             CCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCC
Confidence            3678889999999999999999999999997531           567799999999999 999998 653221   1  


Q ss_pred             ---CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeec
Q 025054           68 ---DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNK  140 (258)
Q Consensus        68 ---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~  140 (258)
                         .+..+..+..+|..+|..+|.+++.    .+++++++||+.+|+..                    .+++...++++
T Consensus       121 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~--------------------~~~~~~~~~~~  180 (267)
T 3ay3_A          121 TRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP--------------------KDARMMATWLS  180 (267)
T ss_dssp             SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSC--------------------CSHHHHHHBCC
T ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCC--------------------CCCCeeecccc
Confidence               1112233456778899999998764    68999999999987420                    01234567999


Q ss_pred             cchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHh
Q 025054          141 EEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQD  204 (258)
Q Consensus       141 ~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  204 (258)
                      ++|+|++++.++..+...++.+++.++ ...++.|+.+.  +.+|.+.+   ++.++.++.+..
T Consensus       181 ~~dva~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~--~~lg~~p~---~~~~~~~~~~~~  238 (267)
T 3ay3_A          181 VDDFMRLMKRAFVAPKLGCTVVYGASA-NTESWWDNDKS--AFLGWVPQ---DSSEIWREEIEQ  238 (267)
T ss_dssp             HHHHHHHHHHHHHSSCCCEEEEEECCS-CSSCCBCCGGG--GGGCCCCC---CCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCceeEecCCC-ccccccCHHHH--HHcCCCCC---CCHHHHHHHHHh
Confidence            999999999999887544678888874 47888888887  78886654   355555555544

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.68  E-value=4.4e-16  Score=130.25  Aligned_cols=182  Identities=12%  Similarity=-0.018  Sum_probs=131.8

Q ss_pred             CceeEEeccCCCHHHHHHhh-CCCcEEEEccCccc--------------hhchHHHHHHHHHhC----CccEEEc-CCCC
Q 025054            5 INCLIAQGDLHDHESLVKAI-KPVDVVISAVGRTE--------------VEDQFKLIAAIKEVG----NIKRFFP-TEYG   64 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al-~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g----~vk~~v~-S~~~   64 (258)
                      .+++++.+|++|.+++.+++ .++|+|||+++...              +.++.+++++|++.+    ++++||+ |+..
T Consensus        64 ~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~  143 (342)
T 2hrz_A           64 GAVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIA  143 (342)
T ss_dssp             SEEEEEECCTTSTTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG
T ss_pred             CceeEEEcCCCCHHHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchH
Confidence            45788999999999999999 48999999998531              567789999998864    3789998 6532


Q ss_pred             CCC-------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccc-cCcCCCCCCCC------CCCCCCce
Q 025054           65 SNV-------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFG-FFLPTMAQPGA------TAPPRENI  126 (258)
Q Consensus        65 ~~~-------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~-~~~~~~~~~~~------~~~~~~~~  126 (258)
                      ...       ++..+..+..+|..+|..+|.++++    .+++++++|++.+++ +..........      ........
T Consensus       144 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~  223 (342)
T 2hrz_A          144 VFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEA  223 (342)
T ss_dssp             GCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCE
T ss_pred             hhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCe
Confidence            211       1112223456777899999998865    378999999999887 43211000000      00122334


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCCC---CCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRT---LNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~---~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      .++++++....+++++|++++++.++..+..   .++.|+++|  +.+|++|+++.+.+.+|.+.
T Consensus       224 ~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g--~~~s~~e~~~~i~~~~g~~~  286 (342)
T 2hrz_A          224 VLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG--LSATVGEQIEALRKVAGEKA  286 (342)
T ss_dssp             EECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC--EEEEHHHHHHHHHHHHCHHH
T ss_pred             eccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCC--CCCCHHHHHHHHHHHcCccc
Confidence            5566667788899999999999999987632   577999974  57999999999999999764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.66  E-value=1.1e-16  Score=133.63  Aligned_cols=175  Identities=15%  Similarity=0.148  Sum_probs=119.9

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC---
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV---   67 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~---   67 (258)
                      +++++.+|++|.+++.++++++|+|||+++...              +.++.+++++|+++++++|||+ |+.++..   
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~  136 (337)
T 2c29_D           57 HLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQE  136 (337)
T ss_dssp             HEEEEECCTTSTTTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSS
T ss_pred             eEEEEEcCCCCHHHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCC
Confidence            578999999999999999999999999986421              4567899999998765899998 6643111   


Q ss_pred             C------CCCCC---------CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCC-C---CCCC
Q 025054           68 D------AGHPI---------EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGAT-A---PPRE  124 (258)
Q Consensus        68 ~------~~~~~---------~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~-~---~~~~  124 (258)
                      .      +....         ++..+|..+|..+|.++.+    .+++++++||+.+||+........... .   ....
T Consensus       137 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~  216 (337)
T 2c29_D          137 HQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGN  216 (337)
T ss_dssp             SCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTC
T ss_pred             CCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCC
Confidence            0      00000         1233577799999987743    589999999999999764321000000 0   0000


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                      .. .++.+ ....+++++|+|++++.+++.+. .++.|++++  ..+|++|+++.+.+.++
T Consensus       217 ~~-~~~~~-~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~~--~~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          217 EA-HYSII-RQGQFVHLDDLCNAHIYLFENPK-AEGRYICSS--HDCIILDLAKMLREKYP  272 (337)
T ss_dssp             GG-GHHHH-TEEEEEEHHHHHHHHHHHHHCTT-CCEEEEECC--EEEEHHHHHHHHHHHCT
T ss_pred             Cc-ccccc-CCCCEEEHHHHHHHHHHHhcCcc-cCceEEEeC--CCCCHHHHHHHHHHHCC
Confidence            11 11211 22459999999999999998754 345676653  47999999999999874

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.66  E-value=2.1e-16  Score=129.84  Aligned_cols=175  Identities=14%  Similarity=0.070  Sum_probs=117.2

Q ss_pred             HHHHhhCCCcEEEEccCcc-------------------chhchHHHHHHHHHhCCcc--EEEc-CC---CCCCCCC----
Q 025054           19 SLVKAIKPVDVVISAVGRT-------------------EVEDQFKLIAAIKEVGNIK--RFFP-TE---YGSNVDA----   69 (258)
Q Consensus        19 ~l~~al~g~d~Vi~~~~~~-------------------~~~~~~~li~aa~~~g~vk--~~v~-S~---~~~~~~~----   69 (258)
                      ...++++++|+|||+++..                   ++..++++++++++++ ++  +||+ |+   ||.....    
T Consensus        44 ~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~-~~~~~~i~~Ss~~vyg~~~~~~~~E  122 (298)
T 4b4o_A           44 LAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP-QPPKAWVLVTGVAYYQPSLTAEYDE  122 (298)
T ss_dssp             HHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCSEEEEEEEGGGSCCCSSCCBCT
T ss_pred             hhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC-CCceEEEEEeeeeeecCCCCCcccc
Confidence            4456789999999998632                   0466789999999877 44  4776 44   3322111    


Q ss_pred             CCCCCCCccchhhHHHHHHHH--HhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHH
Q 025054           70 GHPIEPAKSGYARKAKIRRAI--EAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATY  147 (258)
Q Consensus        70 ~~~~~~~~~~~~~k~~~e~~l--~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~  147 (258)
                      ..+..+...+...+...|...  .+.+++++++|++.+||+....+.... .....+....+|+|++.++|||++|++++
T Consensus       123 ~~p~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~-~~~~~~~~~~~g~g~~~~~~ihv~Dva~a  201 (298)
T 4b4o_A          123 DSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHML-LPFRLGLGGPIGSGHQFFPWIHIGDLAGI  201 (298)
T ss_dssp             TCCCSCSSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHH-HHHHTTCCCCBTTSCSBCCEEEHHHHHHH
T ss_pred             cCCccccchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCCCchhHHH-HHHhcCCcceecccCceeecCcHHHHHHH
Confidence            122222222233444444433  336899999999999996432111000 00011233456889999999999999999


Q ss_pred             HHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054          148 TIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI  198 (258)
Q Consensus       148 ~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~  198 (258)
                      +..+++++. .++.||++++ +.+|++|+++.+++.+|++.. .++|...+
T Consensus       202 ~~~~~~~~~-~~g~yn~~~~-~~~t~~e~~~~ia~~lgrp~~-~pvP~~~~  249 (298)
T 4b4o_A          202 LTHALEANH-VHGVLNGVAP-SSATNAEFAQTFGAALGRRAF-IPLPSAVV  249 (298)
T ss_dssp             HHHHHHCTT-CCEEEEESCS-CCCBHHHHHHHHHHHHTCCCC-CCBCHHHH
T ss_pred             HHHHHhCCC-CCCeEEEECC-CccCHHHHHHHHHHHhCcCCc-ccCCHHHH
Confidence            999998875 5669999986 599999999999999998754 46776533

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.65  E-value=6.6e-17  Score=142.61  Aligned_cols=178  Identities=11%  Similarity=0.050  Sum_probs=115.8

Q ss_pred             EeccCCCHHHHHHhhCCCcEEEEccCcc----------------chhchHHHHHH-HHHhCCccEEEc-CCCCCCC----
Q 025054           10 AQGDLHDHESLVKAIKPVDVVISAVGRT----------------EVEDQFKLIAA-IKEVGNIKRFFP-TEYGSNV----   67 (258)
Q Consensus        10 ~~~D~~d~~~l~~al~g~d~Vi~~~~~~----------------~~~~~~~li~a-a~~~g~vk~~v~-S~~~~~~----   67 (258)
                      +.+|+++  .+.++++++|+|||+++..                ++.++.+++++ |++.+ +++||+ |+.+...    
T Consensus       187 v~~d~~~--~~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~~~  263 (516)
T 3oh8_A          187 RFWDPLN--PASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHDRG  263 (516)
T ss_dssp             EECCTTS--CCTTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSEEE
T ss_pred             eeecccc--hhHHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCCCC
Confidence            4566654  3567889999999999853                15668999999 56677 999998 6533211    


Q ss_pred             ----CCCCCCCCCccchhhHHHHHHHH---HhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeec
Q 025054           68 ----DAGHPIEPAKSGYARKAKIRRAI---EAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNK  140 (258)
Q Consensus        68 ----~~~~~~~~~~~~~~~k~~~e~~l---~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~  140 (258)
                          .+..+ .+...|...|...|..+   ++.|++++++||+.+||+....+..+. .....+....+|+|++.+++|+
T Consensus       264 ~~~~~E~~~-~~~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~-~~~~~g~~~~~g~g~~~~~~i~  341 (516)
T 3oh8_A          264 DEILTEESE-SGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLK-TLFSTGLGGKFGDGTSWFSWIA  341 (516)
T ss_dssp             EEEECTTSC-CCSSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTBSHHHHHH-HTTC---CCCCTTSCCEECEEE
T ss_pred             CCccCCCCC-CCcChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCCChHHHHH-HHHHhCCCcccCCCCceEceEe
Confidence                11111 13344555777777554   457999999999999996422110000 0011222345688899999999


Q ss_pred             cchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054          141 EEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE  195 (258)
Q Consensus       141 ~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~  195 (258)
                      ++|+|++++.++.++. .++.||++++ +.+|+.|+++.+.+.+|.+. ...+|.
T Consensus       342 v~Dva~ai~~~l~~~~-~~g~~ni~~~-~~~s~~el~~~i~~~~g~~~-~~~~p~  393 (516)
T 3oh8_A          342 IDDLTDIYYRAIVDAQ-ISGPINAVAP-NPVSNADMTKILATSMHRPA-FIQIPS  393 (516)
T ss_dssp             HHHHHHHHHHHHHCTT-CCEEEEESCS-CCEEHHHHHHHTTC-------------
T ss_pred             HHHHHHHHHHHHhCcc-cCCcEEEECC-CCCCHHHHHHHHHHHhCCCC-CCCCCH
Confidence            9999999999998875 5678999985 59999999999999999865 334444

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.65  E-value=5.9e-17  Score=126.63  Aligned_cols=144  Identities=14%  Similarity=0.104  Sum_probs=110.4

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAG   70 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~   70 (258)
                      .+++++.+|++|.+++.+++  +|+|||+++...             +....+++++|++.+ +++||+ |+.+....  
T Consensus        46 ~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~--  120 (215)
T 2a35_A           46 PRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK--  120 (215)
T ss_dssp             TTEECCBSCHHHHGGGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT--
T ss_pred             CCceEEeccccCHHHHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCC--
Confidence            46788899999999998888  999999998532             567889999999999 999998 77665432  


Q ss_pred             CCCCCCccchhhHHHHHHHHHhCCCC-eEEEecCcccccCcCC-CCCCCCCCCCCCceEeccCCCceeeeeccchHHHHH
Q 025054           71 HPIEPAKSGYARKAKIRRAIEAEGIP-HTYVSCNCSFGFFLPT-MAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYT  148 (258)
Q Consensus        71 ~~~~~~~~~~~~k~~~e~~l~~~~~~-~t~lr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~  148 (258)
                          +..+|..+|..+|+++++.+++ ++++||+.+||+.... +...    .......+ +++  .+++++++|+|+++
T Consensus       121 ----~~~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~----~~~~~~~~-~~~--~~~~i~~~Dva~~~  189 (215)
T 2a35_A          121 ----SSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEI----LAAPIARI-LPG--KYHGIEACDLARAL  189 (215)
T ss_dssp             ----CSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGG----TTCCCC-----C--HHHHHHHHHHHHHH
T ss_pred             ----CccHHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCCCcchHHHH----HHHhhhhc-cCC--CcCcEeHHHHHHHH
Confidence                3457888999999999999999 9999999999975431 1100    01111111 222  67899999999999


Q ss_pred             HHHhcCCCCCCceEEEcC
Q 025054          149 IKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       149 ~~~l~~~~~~~~~~~l~g  166 (258)
                      +.++.++  .++.|++++
T Consensus       190 ~~~~~~~--~~~~~~i~~  205 (215)
T 2a35_A          190 WRLALEE--GKGVRFVES  205 (215)
T ss_dssp             HHHHTCC--CSEEEEEEH
T ss_pred             HHHHhcC--CCCceEEcH
Confidence            9999987  388899985

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.65  E-value=2.6e-16  Score=123.76  Aligned_cols=157  Identities=10%  Similarity=0.055  Sum_probs=110.2

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCcc--------chhchHHHHHHHHHhCCccEEEc-CCCCCCCCCC----
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRT--------EVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAG----   70 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~--------~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~----   70 (258)
                      ..+++++.+|++|.++  ++++++|+|||+++..        ++..+++++++|+++|  +|+|+ |+.+......    
T Consensus        42 ~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~  117 (224)
T 3h2s_A           42 GATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHP  117 (224)
T ss_dssp             CTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSC
T ss_pred             CCCceEEecccccccH--hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCcc
Confidence            4689999999999887  8899999999999873        2788899999999988  67777 7643211110    


Q ss_pred             ------CCCCCCccchhhHHHHHHH--H-HhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeecc
Q 025054           71 ------HPIEPAKSGYARKAKIRRA--I-EAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKE  141 (258)
Q Consensus        71 ------~~~~~~~~~~~~k~~~e~~--l-~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~  141 (258)
                            ....+...|..+|...|.+  + ++.+++|++|||+++||+.... . +.   .....+..   ++...+++++
T Consensus       118 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~-~-~~---~~~~~~~~---~~~~~~~i~~  189 (224)
T 3h2s_A          118 MILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPAT-S-YV---AGKDTLLV---GEDGQSHITT  189 (224)
T ss_dssp             GGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBCCCCCCC-C-EE---EESSBCCC---CTTSCCBCCH
T ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEEEcCccccCCCccc-C-ce---eccccccc---CCCCCceEeH
Confidence                  0001144566799998854  2 2478999999999999873211 0 10   11111211   2345689999


Q ss_pred             chHHHHHHHHhcCCCCCCceEEEcCCCCccCH
Q 025054          142 EDIATYTIKAVDDPRTLNKTLYLRPPKNIYSF  173 (258)
Q Consensus       142 ~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~  173 (258)
                      +|+|++++.++++++..|+.|++++.. ..++
T Consensus       190 ~DvA~~~~~~l~~~~~~g~~~~~~~~~-~~~~  220 (224)
T 3h2s_A          190 GNMALAILDQLEHPTAIRDRIVVRDAD-LEHH  220 (224)
T ss_dssp             HHHHHHHHHHHHSCCCTTSEEEEEECC-----
T ss_pred             HHHHHHHHHHhcCccccCCEEEEecCc-chhc
Confidence            999999999999988789999999754 4443

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.65  E-value=1.7e-16  Score=131.65  Aligned_cols=172  Identities=16%  Similarity=0.152  Sum_probs=118.9

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHh-CCccEEEc-CCCCC---C
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEV-GNIKRFFP-TEYGS---N   66 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~-g~vk~~v~-S~~~~---~   66 (258)
                      +++++.+|++|++++.++++++|+|||+++...              +.++.+++++|+++ + ++|||+ |+..+   .
T Consensus        54 ~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~  132 (322)
T 2p4h_X           54 KLHFFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFN  132 (322)
T ss_dssp             HEEECCCCTTCGGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCS
T ss_pred             ceEEEecCCCCHHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccC
Confidence            467889999999999999999999999986421              56788999999988 7 999998 65431   1


Q ss_pred             CCC------CCCC--------CCCc-cchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCC--C---CC
Q 025054           67 VDA------GHPI--------EPAK-SGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGAT--A---PP  122 (258)
Q Consensus        67 ~~~------~~~~--------~~~~-~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~--~---~~  122 (258)
                      ...      ....        .|.. +|..+|..+|.++.+    .+++++++||+.+||+...... ....  .   ..
T Consensus       133 ~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~-~~~~~~~~~~~~  211 (322)
T 2p4h_X          133 GKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKL-PDSIEKALVLVL  211 (322)
T ss_dssp             SSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSC-CHHHHHHTHHHH
T ss_pred             CCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCC-CchHHHHHHHHh
Confidence            100      0000        0111 477799999987753    6899999999999997643210 0000  0   00


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                      ..... ++.  ..+++++++|+|++++.+++.+...| .|+ ++ ++.+|++|+++.+.+..+
T Consensus       212 g~~~~-~~~--~~~~~i~v~Dva~a~~~~~~~~~~~g-~~~-~~-~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          212 GKKEQ-IGV--TRFHMVHVDDVARAHIYLLENSVPGG-RYN-CS-PFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             SCGGG-CCE--EEEEEEEHHHHHHHHHHHHHSCCCCE-EEE-CC-CEEEEHHHHHHHHHHHCT
T ss_pred             CCCcc-CcC--CCcCEEEHHHHHHHHHHHhhCcCCCC-CEE-Ec-CCCCCHHHHHHHHHHhCC
Confidence            11111 221  34589999999999999997754334 477 44 468999999999998764

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.63  E-value=8.8e-17  Score=134.29  Aligned_cols=175  Identities=17%  Similarity=0.124  Sum_probs=120.6

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCC-----
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS-----   65 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~-----   65 (258)
                      +++++.+|++|.+++.++++++|+|||+++...              +.++.++++||+++++++|||+ |+.++     
T Consensus        60 ~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~  139 (338)
T 2rh8_A           60 DLKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQ  139 (338)
T ss_dssp             CEEEEECCTTTSSSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHH
T ss_pred             cEEEEecCCCChHHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCC
Confidence            588999999999999999999999999986421              5678899999999844999998 66431     


Q ss_pred             ------CCCCCCC--------CCC-CccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCCC-----C
Q 025054           66 ------NVDAGHP--------IEP-AKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGATA-----P  121 (258)
Q Consensus        66 ------~~~~~~~--------~~~-~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~~-----~  121 (258)
                            ..++...        ..+ ..+|..+|..+|+++++    .++++++|||+.+||+...... .....     .
T Consensus       140 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~-~~~~~~~~~~~  218 (338)
T 2rh8_A          140 LDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDV-PSSIGLAMSLI  218 (338)
T ss_dssp             HTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSC-CHHHHHHHHHH
T ss_pred             cCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCC-CchHHHHHHHH
Confidence                  0111110        001 12477799999987754    5899999999999998643210 00000     0


Q ss_pred             CCCceEeccC------CCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          122 PRENILFYGD------GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       122 ~~~~~~~~g~------g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                      ..... .++.      ++..+++++++|+|++++.+++.+. .++.|++++  ..+|++|+++.+.+..+
T Consensus       219 ~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~~--~~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          219 TGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES-ASGRYICCA--ANTSVPELAKFLSKRYP  284 (338)
T ss_dssp             HTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT-CCEEEEECS--EEECHHHHHHHHHHHCT
T ss_pred             cCCcc-ccccccccccccCcccEEEHHHHHHHHHHHHcCCC-cCCcEEEec--CCCCHHHHHHHHHHhCC
Confidence            00111 1111      1123589999999999999997754 355677764  47999999999998775

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.60  E-value=4.5e-15  Score=120.01  Aligned_cols=173  Identities=13%  Similarity=0.067  Sum_probs=126.9

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-----------hhchHHHHHHHHHhCCccEEEc-CCC---CCCC--
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSNV--   67 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~~--   67 (258)
                      .+++++.+|++|.+++.++++++|+|||+++...           +.++.+++++|++++ ++++|+ |+.   +...  
T Consensus        43 ~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~  121 (267)
T 3rft_A           43 PNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQT  121 (267)
T ss_dssp             TTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTT
T ss_pred             CCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCC
Confidence            5688999999999999999999999999998532           677899999999999 999998 653   2111  


Q ss_pred             ---CCCCCCCCCccchhhHHHHHHHHH----hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeec
Q 025054           68 ---DAGHPIEPAKSGYARKAKIRRAIE----AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNK  140 (258)
Q Consensus        68 ---~~~~~~~~~~~~~~~k~~~e~~l~----~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~  140 (258)
                         .+..+..+...|..+|..+|.+++    +.++++++|||+.+++..                    +++....+|++
T Consensus       122 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~--------------------~~~~~~~~~~~  181 (267)
T 3rft_A          122 ERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEP--------------------NNYRMLSTWFS  181 (267)
T ss_dssp             SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSC--------------------CSTTHHHHBCC
T ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCC--------------------CCCCceeeEEc
Confidence               111233455667789999998886    368999999999988652                    12344567899


Q ss_pred             cchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHh
Q 025054          141 EEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQD  204 (258)
Q Consensus       141 ~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  204 (258)
                      ++|+++++..+++.+...+..+++.++ +..++.++...  +.+|.+.+.   ..+++.+.+..
T Consensus       182 ~~d~a~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~--~~~g~~p~~---~~~~~~~~l~~  239 (267)
T 3rft_A          182 HDDFVSLIEAVFRAPVLGCPVVWGASA-NDAGWWDNSHL--GFLGWKPKD---NAEAFRRHITE  239 (267)
T ss_dssp             HHHHHHHHHHHHHCSCCCSCEEEECCC-CTTCCBCCGGG--GGGCCCCCC---CGGGGHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCCceEEEEeCC-CCCCcccChhH--HHCCCCCCC---CHHHHHHHHHh
Confidence            999999999999887655678888875 46777666433  456653322   23445555543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.49  E-value=5.7e-14  Score=111.64  Aligned_cols=157  Identities=13%  Similarity=0.034  Sum_probs=111.6

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGH   71 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~   71 (258)
                      .+++++.+|++|++++.++++++|+|||+++...            +.+..++++++++.+ +++||+ |+.+....   
T Consensus        63 ~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~---  138 (242)
T 2bka_A           63 KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS---  138 (242)
T ss_dssp             GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT---
T ss_pred             CCceEEecCcCCHHHHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC---
Confidence            4688999999999999999999999999998642            567789999999999 999998 77665431   


Q ss_pred             CCCCCccchhhHHHHHHHHHhCCCC-eEEEecCcccccCcCCCCCCCCCCCCCCceE-eccCCCceeeeeccchHHHHHH
Q 025054           72 PIEPAKSGYARKAKIRRAIEAEGIP-HTYVSCNCSFGFFLPTMAQPGATAPPRENIL-FYGDGQPKAIFNKEEDIATYTI  149 (258)
Q Consensus        72 ~~~~~~~~~~~k~~~e~~l~~~~~~-~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~g~~~~~~v~~~D~a~~~~  149 (258)
                         +..+|..+|..+|.+++..+++ +++||||.++++...............+..+ .++.    ..+++++|+|++++
T Consensus       139 ---~~~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dva~~~~  211 (242)
T 2bka_A          139 ---SNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWAS----GHSVPVVTVVRAML  211 (242)
T ss_dssp             ---CSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGG----GTEEEHHHHHHHHH
T ss_pred             ---CcchHHHHHHHHHHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccC----CcccCHHHHHHHHH
Confidence               2457888999999999999995 9999999999975321000000000000011 0111    24899999999999


Q ss_pred             HHhcCCCCCCceEEEcCCCCccCHHHHHHHH
Q 025054          150 KAVDDPRTLNKTLYLRPPKNIYSFKELVALW  180 (258)
Q Consensus       150 ~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~  180 (258)
                      .++.++.. .+.+.+.       ..|+.++.
T Consensus       212 ~~~~~~~~-~~~~~~~-------~~~i~~~~  234 (242)
T 2bka_A          212 NNVVRPRD-KQMELLE-------NKAIHDLG  234 (242)
T ss_dssp             HHHTSCCC-SSEEEEE-------HHHHHHHT
T ss_pred             HHHhCccc-cCeeEee-------HHHHHHHH
Confidence            99988753 3344443       35666553

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.26  E-value=8.9e-12  Score=101.00  Aligned_cols=168  Identities=13%  Similarity=0.057  Sum_probs=114.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHH----hC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKE----VG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~----~g   53 (258)
                      ++.++.+|++|++++.++++       ++|+|||+++...                     +.+..++++++..    .+
T Consensus        65 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  144 (278)
T 2bgk_A           65 VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK  144 (278)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence            68899999999999988876       7999999997420                     3444566666654    46


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       ..++|. |+........   .+...|..+|..++.+.+.       .+++++++|||++++.+.......     ....
T Consensus       145 -~~~iv~isS~~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~  215 (278)
T 2bgk_A          145 -KGSIVFTASISSFTAGE---GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-----DSSR  215 (278)
T ss_dssp             -CEEEEEECCGGGTCCCT---TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-----CHHH
T ss_pred             -CCeEEEEeeccccCCCC---CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc-----chhH
Confidence             779998 6654432211   1244677799999887754       589999999999998764332110     0000


Q ss_pred             e-Ee-ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHH
Q 025054          126 I-LF-YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKK  183 (258)
Q Consensus       126 ~-~~-~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~  183 (258)
                      . .+ ...+.....+++++|+|++++.++.++.  ..|+.+++.| +..+|++|+++.+.+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          216 VEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDG-GYTRTNPAFPTALKHG  276 (278)
T ss_dssp             HHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGCCTHHHHHSCSC
T ss_pred             HHHhhhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEECC-cccccCCccchhhhhh
Confidence            0 00 0011112347899999999999997642  3488999987 5689999999987654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.18  E-value=4e-11  Score=97.41  Aligned_cols=173  Identities=17%  Similarity=0.113  Sum_probs=112.9

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~   54 (258)
                      .+++++.+|++|.+++.++++       ++|+|||+++...                   +.+    .+.++.++++.+ 
T Consensus        51 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-  129 (281)
T 3m1a_A           51 DRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-  129 (281)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            358889999999999988876       7899999998531                   233    667777778888 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCC-CCCCCCC--
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQP-GATAPPR--  123 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~-~~~~~~~--  123 (258)
                      ..++|. |+......    .++..+|..+|+.++.+.+.       .++++++++||++.+++....... .......  
T Consensus       130 ~~~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  205 (281)
T 3m1a_A          130 SGSVVNISSFGGQLS----FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAE  205 (281)
T ss_dssp             CEEEEEECCGGGTCC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHH
T ss_pred             CCEEEEEcCccccCC----CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHH
Confidence            889998 76544332    22456777899999887653       589999999999987654321100 0000000  


Q ss_pred             C--ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHh
Q 025054          124 E--NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI  184 (258)
Q Consensus       124 ~--~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~  184 (258)
                      .  ...-...+.....+.+++|+|++++.+++++. .+..|+++++ ....+.+....+.+.+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~-~~~~~~l~s~-~~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          206 KVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEK-TPLRLALGGD-AVDFLTGHLDSVRAEL  266 (281)
T ss_dssp             HHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSS-CCSEEEESHH-HHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCC-CCeEEecCch-HHHHHHHHHHHHHHHH
Confidence            0  00001111223457899999999999998874 5678888863 3555666666665544

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.15  E-value=1.6e-11  Score=94.99  Aligned_cols=126  Identities=17%  Similarity=0.134  Sum_probs=93.0

Q ss_pred             eEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEEc-CCCC
Q 025054            8 LIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFFP-TEYG   64 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v~-S~~~   64 (258)
                      +++.+|++|++++.++++   ++|+|||+++...                   +.+..++++++++.+ .+++|+ |+..
T Consensus        45 ~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~  123 (207)
T 2yut_A           45 RALPADLADELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYP  123 (207)
T ss_dssp             EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCH
T ss_pred             cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChh
Confidence            778899999999999998   8999999997421                   455668888887777 889998 6653


Q ss_pred             CCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceee
Q 025054           65 SNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAI  137 (258)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  137 (258)
                      ....    .++...|..+|..++.+++.       .+++++++|||++++.+...                  .+.....
T Consensus       124 ~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------------~~~~~~~  181 (207)
T 2yut_A          124 RYVQ----VPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP------------------LGGPPKG  181 (207)
T ss_dssp             HHHS----STTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG------------------GTSCCTT
T ss_pred             hccC----CCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc------------------cCCCCCC
Confidence            3211    12345677799999887754       58999999999998765221                  1112246


Q ss_pred             eeccchHHHHHHHHhcCCC
Q 025054          138 FNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       138 ~v~~~D~a~~~~~~l~~~~  156 (258)
                      +++++|+|++++.++++++
T Consensus       182 ~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          182 ALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             CBCHHHHHHHHHHHHC--C
T ss_pred             CCCHHHHHHHHHHHHhCCC
Confidence            8999999999999998763

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.12  E-value=2e-10  Score=93.09  Aligned_cols=169  Identities=13%  Similarity=0.106  Sum_probs=98.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc------------c-----------hhchHHHHHHHHH----
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT------------E-----------VEDQFKLIAAIKE----   51 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~------------~-----------~~~~~~li~aa~~----   51 (258)
                      ++.++.+|++|++++.++++       ++|+|||+++..            .           +.+..++++++..    
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  138 (278)
T 1spx_A           59 NVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSS  138 (278)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             ceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence            47889999999999988887       899999999742            1           2233445555443    


Q ss_pred             hCCccEEEc-CCCCC-CCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC
Q 025054           52 VGNIKRFFP-TEYGS-NVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP  122 (258)
Q Consensus        52 ~g~vk~~v~-S~~~~-~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~  122 (258)
                      .+  .++|. |+... ...    .++...|..+|+.++.+.+.       .|+.+++|+||++.+++........   ..
T Consensus       139 ~~--g~iv~isS~~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~  209 (278)
T 1spx_A          139 TK--GEIVNISSIASGLHA----TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE---ET  209 (278)
T ss_dssp             HT--CEEEEECCTTSSSSC----CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-------------
T ss_pred             cC--CeEEEEecccccccC----CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCc---hh
Confidence            34  68887 76544 221    12344566799999877654       5899999999999887643211000   00


Q ss_pred             CCc----eEeccCCCceeeeeccchHHHHHHHHhcCCC---CCCceEEEcCCCCccCHHHHHHHHHHHh
Q 025054          123 REN----ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR---TLNKTLYLRPPKNIYSFKELVALWEKKI  184 (258)
Q Consensus       123 ~~~----~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~---~~~~~~~l~g~~~~~t~~e~~~~~~~~~  184 (258)
                      ...    ............+.+++|+|++++.++.++.   ..|+.+++.| +..+++.|+++.+.+++
T Consensus       210 ~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdg-G~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          210 SKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG-GSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             ----HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST-TGGGC------------
T ss_pred             hhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECC-CcccccCcccccHHHHh
Confidence            000    0000000001137899999999999987653   2488999987 56999999999998764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.12  E-value=5.7e-12  Score=100.69  Aligned_cols=157  Identities=8%  Similarity=-0.026  Sum_probs=101.4

Q ss_pred             eccCCCHHHHHHhhC----CCcEEEEccCccc------------hhchHHHHHHHHHh----CCccEEEc-CCCCCCCCC
Q 025054           11 QGDLHDHESLVKAIK----PVDVVISAVGRTE------------VEDQFKLIAAIKEV----GNIKRFFP-TEYGSNVDA   69 (258)
Q Consensus        11 ~~D~~d~~~l~~al~----g~d~Vi~~~~~~~------------~~~~~~li~aa~~~----g~vk~~v~-S~~~~~~~~   69 (258)
                      .+|+.|.+++.++++    ++|+|||+++...            +.+..++++++...    + .+++|+ |+.......
T Consensus        43 ~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~  121 (255)
T 2dkn_A           43 STPGGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPG  121 (255)
T ss_dssp             TSHHHHHHHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTT
T ss_pred             cCCcccHHHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEecccccccc
Confidence            467778888888886    8999999997532            45667777776654    5 789998 665432211


Q ss_pred             CCC----------------------CCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054           70 GHP----------------------IEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATA  120 (258)
Q Consensus        70 ~~~----------------------~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~  120 (258)
                      ...                      .++...|..+|..+|.+++.       .+++++++|||++++++........   
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~---  198 (255)
T 2dkn_A          122 AAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADP---  198 (255)
T ss_dssp             GGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCT---
T ss_pred             ccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccch---
Confidence            000                      01334566799999987764       5899999999999987543220000   


Q ss_pred             CCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHH
Q 025054          121 PPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFK  174 (258)
Q Consensus       121 ~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~  174 (258)
                      .......... + ....+++++|+|++++.++.++.  ..|+.+++.| +..+|++
T Consensus       199 ~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~~  251 (255)
T 2dkn_A          199 RYGESTRRFV-A-PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDG-GMDALMR  251 (255)
T ss_dssp             TTHHHHHSCC-C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-THHHHHC
T ss_pred             hhHHHHHHHH-H-HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecC-CeEeeee
Confidence            0000011111 1 22358999999999999998762  3578999986 4455544

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.09  E-value=2e-10  Score=91.73  Aligned_cols=155  Identities=14%  Similarity=0.158  Sum_probs=103.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhchHHHHHHH----HHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VEDQFKLIAAI----KEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~~~~li~aa----~~~g~vk   56 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                  +.+..++++++    ++.+ .+
T Consensus        61 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~  139 (255)
T 1fmc_A           61 QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GG  139 (255)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-Cc
Confidence            47788999999999988876       8999999997421                  34445556655    4567 78


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+......    .++...|..+|+.++.+.+.       .++.++++|||.+++.+.........   . ..  +
T Consensus       140 ~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~---~-~~--~  209 (255)
T 1fmc_A          140 VILTITSMAAENK----NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI---E-QK--M  209 (255)
T ss_dssp             EEEEECCGGGTCC----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHH---H-HH--H
T ss_pred             EEEEEcchhhcCC----CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHH---H-HH--H
Confidence            9998 66544322    12345677799999887754       48999999999999865432110000   0 00  0


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCH
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSF  173 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~  173 (258)
                      . .+.....+.+++|+|++++.++.++.  ..|+.+++.| +..+|+
T Consensus       210 ~-~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~~s~  254 (255)
T 1fmc_A          210 L-QHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSG-GGVQEL  254 (255)
T ss_dssp             H-HTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TSCCCC
T ss_pred             H-hcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEEECC-ceeccC
Confidence            0 01111236789999999999997653  2478999987 556653

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.02  E-value=3.9e-09  Score=84.80  Aligned_cols=149  Identities=13%  Similarity=0.122  Sum_probs=90.2

Q ss_pred             ceeEEeccCCCHHHHHHhh--------CCCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAI--------KPVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al--------~g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|++|.+++.+++        .++|+|||+++...                   +.+..++++++    ++.+ 
T Consensus        64 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-  142 (266)
T 1xq1_A           64 QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-  142 (266)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             eeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            4788999999999888877        57899999997421                   34445666666    5677 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      .+++|. |+.......    ++...|..+|+.++.+.+.       .++.+++||||++++.+.........   . .. 
T Consensus       143 ~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~-~~-  213 (266)
T 1xq1_A          143 CGNIIFMSSIAGVVSA----SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF---K-KV-  213 (266)
T ss_dssp             SCEEEEEC--------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------
T ss_pred             CcEEEEEccchhccCC----CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHH---H-HH-
Confidence            889998 765443221    2345677799999877754       48999999999999876432210000   0 00 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       +.. ......+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       214 -~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  253 (266)
T 1xq1_A          214 -VIS-RKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDG  253 (266)
T ss_dssp             ------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCC
T ss_pred             -HHh-cCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcC
Confidence             000 0001237899999999999987642  2478888876

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.00  E-value=4.9e-11  Score=97.83  Aligned_cols=169  Identities=9%  Similarity=-0.001  Sum_probs=108.6

Q ss_pred             CceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHHHH-----hC
Q 025054            5 INCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAIKE-----VG   53 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa~~-----~g   53 (258)
                      .++.++.+|++|.+++.++++.       .|+|||+++...                   +.+..++++++..     .+
T Consensus        76 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  155 (302)
T 1w6u_A           76 NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK  155 (302)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence            3588899999999998887764       599999998421                   3344455555532     34


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccC-cCCCCCCCCCCCCCC
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFF-LPTMAQPGATAPPRE  124 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~-~~~~~~~~~~~~~~~  124 (258)
                       ..++|. |+......    .++...|..+|+.++.+.+.       .|+.+++||||.+++.. ...+..      ...
T Consensus       156 -~~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~  224 (302)
T 1w6u_A          156 -GAAFLSITTIYAETG----SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP------TGT  224 (302)
T ss_dssp             -CEEEEEECCTHHHHC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT------TSH
T ss_pred             -CCEEEEEcccccccC----CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhccc------chh
Confidence             578887 66433211    12345677799999887754       58999999999998752 221110      000


Q ss_pred             ce-EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054          125 NI-LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGK  186 (258)
Q Consensus       125 ~~-~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~  186 (258)
                      .. .+. .......+.+++|+|++++.++.++.  ..|+.+++.| +..++++|+++.+.+..|+
T Consensus       225 ~~~~~~-~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~~~~~~~~~~~~g~  287 (302)
T 1w6u_A          225 FEKEMI-GRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDG-GEEVLISGEFNDLRKVTKE  287 (302)
T ss_dssp             HHHHHH-TTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST-THHHHHHSTTGGGGGCCHH
T ss_pred             hHHHHH-hcCCcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECC-CeeeccCCccccchhhccc
Confidence            00 000 11111237789999999999987653  2578899987 5578888888777766554

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.98  E-value=1.2e-09  Score=87.10  Aligned_cols=150  Identities=13%  Similarity=0.096  Sum_probs=99.6

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~   54 (258)
                      .+++++.+|++|++++.++++       ++|+|||+++...                   +    ...+.++.++++.+ 
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-  132 (251)
T 1zk4_A           54 DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-  132 (251)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-
Confidence            368899999999999888776       4899999997421                   1    13455666666677 


Q ss_pred             c-cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---------hCCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           55 I-KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        55 v-k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                      . +++|. |+.......    ++...|..+|+.++.+.+         ..++.++++|||++++++........      
T Consensus       133 ~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~------  202 (251)
T 1zk4_A          133 LGASIINMSSIEGFVGD----PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE------  202 (251)
T ss_dssp             SCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH------
T ss_pred             CCCEEEEeCCchhccCC----CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchh------
Confidence            7 78998 765433221    234567779999887664         35899999999999986543211000      


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .............+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       203 -~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  246 (251)
T 1zk4_A          203 -EAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             -HHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -hhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEEECC
Confidence             00000000011237899999999999997653  2478888876

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=98.98  E-value=9.9e-09  Score=82.31  Aligned_cols=148  Identities=12%  Similarity=0.086  Sum_probs=99.1

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~   54 (258)
                      ..+.++.+|++|++++.++++       ++|++||+++...                   +.+..++++++    ++.+ 
T Consensus        68 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-  146 (260)
T 3un1_A           68 PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-  146 (260)
T ss_dssp             TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-
Confidence            457889999999999888876       7999999997521                   34445566655    5667 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.......  +..+...|..+|+.++.+.+.       .|+.+++|+||++.+.+.+...           .
T Consensus       147 ~g~iv~isS~~~~~~~--~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-----------~  213 (260)
T 3un1_A          147 SGHIVSITTSLVDQPM--VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET-----------H  213 (260)
T ss_dssp             CEEEEEECCTTTTSCB--TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG-----------H
T ss_pred             CcEEEEEechhhccCC--CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH-----------H
Confidence            788887 654432211  112344566699999887754       4899999999999886543200           0


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                      ...........+.+++|+|+++..+.....-.|+.+++.|
T Consensus       214 ~~~~~~~p~~r~~~~~dva~av~~L~~~~~itG~~i~vdG  253 (260)
T 3un1_A          214 STLAGLHPVGRMGEIRDVVDAVLYLEHAGFITGEILHVDG  253 (260)
T ss_dssp             HHHHTTSTTSSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHhccCCCCCCcCHHHHHHHHHHhcccCCCCCcEEEECC
Confidence            0011111122367899999999998544434688999986

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=98.95  E-value=2e-09  Score=85.56  Aligned_cols=148  Identities=16%  Similarity=0.194  Sum_probs=93.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.+..+++++    +++.+ .
T Consensus        56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  134 (247)
T 2hq1_A           56 NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-S  134 (247)
T ss_dssp             CEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            47889999999999988876       7999999997531                   2233334444    44567 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|+ |+.......    ++..+|..+|+.++.+.+.       .++.+++++||++...+...+..        ....
T Consensus       135 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~~~~  202 (247)
T 2hq1_A          135 GKIINITSIAGIIGN----AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPD--------KVKE  202 (247)
T ss_dssp             EEEEEECC-------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH--------HHHH
T ss_pred             cEEEEEcChhhccCC----CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcch--------HHHH
Confidence            89998 765432221    2345677799999877754       48999999999988754322100        0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ....+.....+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       203 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  243 (247)
T 2hq1_A          203 MYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINIDG  243 (247)
T ss_dssp             HHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCC
Confidence            01111111247899999999999987652  2478899976

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.94  E-value=1.7e-08  Score=80.39  Aligned_cols=154  Identities=14%  Similarity=0.102  Sum_probs=92.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      ++.++.+|++|++++.++++       ++|+|||+++...                   +.+..++++++    ++.+ .
T Consensus        47 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~  125 (250)
T 2fwm_X           47 PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-G  125 (250)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-C
Confidence            47788999999999988876       7899999997521                   33444555555    5667 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .++...|..+|+.++.+.+.       .++.+++|+||++.+++........  ......+.
T Consensus       126 g~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~  199 (250)
T 2fwm_X          126 GAIVTVASDAAHTP----RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSD--DAEEQRIR  199 (250)
T ss_dssp             CEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------
T ss_pred             CEEEEECchhhCCC----CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccCh--hHHHHHHh
Confidence            89998 76544322    12345677799999887654       4899999999999887643211000  00000000


Q ss_pred             e----ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 F----YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~----~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      -    .........+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       200 ~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  244 (250)
T 2fwm_X          200 GFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDG  244 (250)
T ss_dssp             ----------------CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            0    0000001136799999999999998752  3578888876

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=98.94  E-value=1.7e-09  Score=83.26  Aligned_cols=133  Identities=17%  Similarity=0.068  Sum_probs=91.9

Q ss_pred             EeccCCCHHHHHHhhCC---CcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEEEc-CCCCC
Q 025054           10 AQGDLHDHESLVKAIKP---VDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRFFP-TEYGS   65 (258)
Q Consensus        10 ~~~D~~d~~~l~~al~g---~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~v~-S~~~~   65 (258)
                      +.+|+.|++++.+++++   +|+|||+++...                   +.+..++++++...- +-.++|+ |+...
T Consensus        39 ~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~  118 (202)
T 3d7l_A           39 VTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMM  118 (202)
T ss_dssp             EECCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGG
T ss_pred             eeeecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhh
Confidence            47899999999988875   899999997421                   345567777776651 0157887 66543


Q ss_pred             CCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeee
Q 025054           66 NVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFN  139 (258)
Q Consensus        66 ~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v  139 (258)
                      ...    .++...|..+|..+|.+++.      .+++++++|||++++.+...                 +++.....++
T Consensus       119 ~~~----~~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~-----------------~~~~~~~~~~  177 (202)
T 3d7l_A          119 EDP----IVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDKL-----------------EPFFEGFLPV  177 (202)
T ss_dssp             TSC----CTTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHH-----------------GGGSTTCCCB
T ss_pred             cCC----CCccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhhh-----------------hhhccccCCC
Confidence            321    12345677799999988865      38999999999998865321                 0111234578


Q ss_pred             ccchHHHHHHHHhcCCCCCCceEEE
Q 025054          140 KEEDIATYTIKAVDDPRTLNKTLYL  164 (258)
Q Consensus       140 ~~~D~a~~~~~~l~~~~~~~~~~~l  164 (258)
                      +++|+|++++.++... ..|+.+++
T Consensus       178 ~~~dva~~~~~~~~~~-~~G~~~~v  201 (202)
T 3d7l_A          178 PAAKVARAFEKSVFGA-QTGESYQV  201 (202)
T ss_dssp             CHHHHHHHHHHHHHSC-CCSCEEEE
T ss_pred             CHHHHHHHHHHhhhcc-ccCceEec
Confidence            9999999999888533 35667765

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.93  E-value=2.4e-09  Score=85.58  Aligned_cols=156  Identities=10%  Similarity=0.118  Sum_probs=101.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +    ...+.++..+++.+ .
T Consensus        52 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~  130 (255)
T 2q2v_A           52 KAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-W  130 (255)
T ss_dssp             CEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C
T ss_pred             ceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            46788999999999998887       8999999997421                   1    24456666677777 8


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC--CCCCCCCCCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ--PGATAPPREN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~--~~~~~~~~~~  125 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .++.+++|+||++.+++......  ..........
T Consensus       131 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  206 (255)
T 2q2v_A          131 GRIINIASVHGLVGS----TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQA  206 (255)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHH
T ss_pred             cEEEEEcCchhccCC----CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHH
Confidence            89998 765433221    2245677799999877653       47999999999998865321100  0000000000


Q ss_pred             -eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 -ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 -~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       ..+.........+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       207 ~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  250 (255)
T 2q2v_A          207 QHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDG  250 (255)
T ss_dssp             HHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECC
Confidence             0010111112347899999999999987653  2478888876

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.92  E-value=1.5e-08  Score=81.18  Aligned_cols=143  Identities=10%  Similarity=0.096  Sum_probs=99.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hh----chHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VE----DQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~----~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.    ..+.++.++++.+ .
T Consensus        54 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~  132 (260)
T 1nff_A           54 AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-R  132 (260)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            37788999999999998887       8999999998421                   12    2256666677777 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .|+.+++||||++++.+.. +..      .  .+.
T Consensus       133 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~------~--~~~  199 (260)
T 1nff_A          133 GSIINISSIEGLAGT----VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVP------E--DIF  199 (260)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSC------T--TCS
T ss_pred             CEEEEEeehhhcCCC----CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cch------h--hHH
Confidence            89998 765443221    2344677799999877653       5899999999999987643 110      0  010


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                        ..  ....+.+++|+|++++.++.++.  ..|+.+++.|
T Consensus       200 --~~--~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~g  236 (260)
T 1nff_A          200 --QT--ALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDG  236 (260)
T ss_dssp             --CC--SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             --hC--ccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence              00  01136789999999999987653  2478899986

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.91  E-value=5.7e-10  Score=90.61  Aligned_cols=171  Identities=11%  Similarity=0.113  Sum_probs=113.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-c-------------------hhchHHHHHHHHH----hCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-E-------------------VEDQFKLIAAIKE----VGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-~-------------------~~~~~~li~aa~~----~g~   54 (258)
                      .+.++.+|++|++++.++++       +.|++||+++.. .                   +.+..++++++..    .+ 
T Consensus        64 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-  142 (281)
T 3svt_A           64 AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-  142 (281)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            57889999999998888776       679999999851 0                   3444556665544    33 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.......    ++...|..+|+.++.+.+.       .++.+..|+||++...+........      ...
T Consensus       143 ~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~------~~~  212 (281)
T 3svt_A          143 GGSFVGISSIAASNTH----RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESA------ELS  212 (281)
T ss_dssp             CEEEEEECCHHHHSCC----TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCH------HHH
T ss_pred             CcEEEEEeCHHHcCCC----CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCH------HHH
Confidence            348887 665332211    2345677799999987753       4799999999999876543211000      000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccC-HHHHHHHHHHHhCCcc
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYS-FKELVALWEKKIGKTL  188 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t-~~e~~~~~~~~~g~~~  188 (258)
                      ...........+.+++|+|++++.++.+..  -.|+.+++.| +..++ ..|+++.+.+.+|.+.
T Consensus       213 ~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdg-G~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          213 SDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDG-GQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             HHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGSCCCCCHHHHHHHHCTTG
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCC-ChhcccCCcchhccccccCCcc
Confidence            000000111235689999999999988653  2488999987 55666 7789999999988754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=98.91  E-value=5.7e-09  Score=83.01  Aligned_cols=149  Identities=15%  Similarity=0.137  Sum_probs=99.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------------------hh----chHHHHHHHHHh
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------------------VE----DQFKLIAAIKEV   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------------------~~----~~~~li~aa~~~   52 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                      +.    ..+.++.++++.
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  132 (250)
T 2cfc_A           53 KVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ  132 (250)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence            47889999999999988876       7999999997310                      11    224555566667


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCC-CCCCCCCCCCC
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPT-MAQPGATAPPR  123 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~-~~~~~~~~~~~  123 (258)
                      + .+++|. |+.......    ++...|..+|..++.+.+.       .+++++++|||++++++... ......   . 
T Consensus       133 ~-~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~-  203 (250)
T 2cfc_A          133 G-AGVIVNIASVASLVAF----PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPEL---R-  203 (250)
T ss_dssp             T-CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHH---H-
T ss_pred             C-CCEEEEECChhhccCC----CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHH---H-
Confidence            7 889998 765443221    2345677799999887754       38999999999999876432 110000   0 


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..  +.. ......+.+.+|+|++++.++.++.  ..|+.+++.|
T Consensus       204 ~~--~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  245 (250)
T 2cfc_A          204 DQ--VLA-RIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDG  245 (250)
T ss_dssp             HH--HHT-TCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred             HH--HHh-cCCCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECC
Confidence            00  000 0111236799999999999998763  2478888875

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.91  E-value=1.4e-09  Score=86.48  Aligned_cols=148  Identities=12%  Similarity=0.090  Sum_probs=98.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.+.    +.++.++++.+ .
T Consensus        58 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  136 (248)
T 2pnf_A           58 KAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-W  136 (248)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-C
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-C
Confidence            47889999999999998886       7999999997421                   2233    44555566677 8


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|+ |+.......    ++...|..+|..++.+.+.       .++.+++++||++.+++...+..        ....
T Consensus       137 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~--------~~~~  204 (248)
T 2pnf_A          137 GRIVNISSVVGFTGN----VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSE--------EIKQ  204 (248)
T ss_dssp             EEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH--------HHHH
T ss_pred             cEEEEEccHHhcCCC----CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccH--------HHHH
Confidence            89998 764322111    1245677799998877653       48999999999998865432110        0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      ..........+++++|+|++++.++.++ . ..|+.+++.|
T Consensus       205 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  245 (248)
T 2pnf_A          205 KYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNG  245 (248)
T ss_dssp             HHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCC
Confidence            0000011124789999999999998764 2 3478898875

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.91  E-value=7.6e-09  Score=81.99  Aligned_cols=151  Identities=14%  Similarity=0.096  Sum_probs=98.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk~~v   59 (258)
                      +++++.+|++|++++.++++   ++|+|||+++...                   +....++++++..    .+...++|
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv  132 (244)
T 3d3w_A           53 GIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIV  132 (244)
T ss_dssp             TCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            67888999999999999986   5799999997421                   3344455555543    33246888


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD  131 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  131 (258)
                      . |+......    .++...|..+|+.++.+.+.       .++.+++++||.+++.+.......     . ........
T Consensus       133 ~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-----~-~~~~~~~~  202 (244)
T 3d3w_A          133 NVSSQCSQRA----VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-----P-HKAKTMLN  202 (244)
T ss_dssp             EECCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS-----T-THHHHHHH
T ss_pred             EeCchhhccC----CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC-----h-HHHHHHHh
Confidence            7 66543321    12345677799999987754       479999999999988654321000     0 00000001


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ......+++++|+|+++..+++++.  ..|+.+++.|
T Consensus       203 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  239 (244)
T 3d3w_A          203 RIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEG  239 (244)
T ss_dssp             TCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            1111357899999999999997652  2578899876

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.91  E-value=2.7e-09  Score=84.63  Aligned_cols=152  Identities=15%  Similarity=0.127  Sum_probs=99.3

Q ss_pred             CceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCccEE
Q 025054            5 INCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIKRF   58 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk~~   58 (258)
                      .+++++.+|++|.+++.++++   ++|+|||+++...                   +.+..++++++..    .+..+++
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~i  131 (244)
T 1cyd_A           52 PGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSI  131 (244)
T ss_dssp             TTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             cCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEE
Confidence            367888999999999999987   4799999998421                   3444555665544    3314688


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |+ |+.......    ++...|..+|+.++.+.+.       .++.++++|||.+++.+.......     . .......
T Consensus       132 v~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-----~-~~~~~~~  201 (244)
T 1cyd_A          132 VNVSSMVAHVTF----PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD-----P-EFARKLK  201 (244)
T ss_dssp             EEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC-----H-HHHHHHH
T ss_pred             EEEcchhhcCCC----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC-----H-HHHHHHH
Confidence            88 765433221    2345677799999987754       489999999999998653211000     0 0000000


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+.....+++++|+|++++.+++++.  ..|+.+++.|
T Consensus       202 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  239 (244)
T 1cyd_A          202 ERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDA  239 (244)
T ss_dssp             HHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred             hcCCccCCCCHHHHHHHHHHHhCchhhcccCCEEEECC
Confidence            11122468999999999999998653  2477888875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=98.90  E-value=2.3e-09  Score=86.02  Aligned_cols=155  Identities=10%  Similarity=0.036  Sum_probs=100.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHH----HHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAA----IKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~a----a~~~g~   54 (258)
                      .+..+.+|++|.+++.++++       ++|+|||+++...                    +.+..+++++    +++.+ 
T Consensus        64 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-  142 (260)
T 2zat_A           64 SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-  142 (260)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            46788999999998888776       7999999997420                    2333344444    45667 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+......    .++...|..+|+.++.+.+.       .++.+++|+||++...+......      .....
T Consensus       143 ~g~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~  212 (260)
T 2zat_A          143 GGSVLIVSSVGAYHP----FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM------DKARK  212 (260)
T ss_dssp             CEEEEEECCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS------SHHHH
T ss_pred             CCEEEEEechhhcCC----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc------ChHHH
Confidence            789998 76544322    12345677799999887754       48999999999988765321100      00000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYS  172 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t  172 (258)
                      ...........+.+++|+|++++.++.++.  ..|+.+++.| +...|
T Consensus       213 ~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg-G~~~s  259 (260)
T 2zat_A          213 EYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGG-GTASR  259 (260)
T ss_dssp             HHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEEST-TCCCC
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECC-Ccccc
Confidence            001110111247899999999999987653  2578899987 44544

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.89  E-value=2.5e-09  Score=85.69  Aligned_cols=161  Identities=14%  Similarity=0.133  Sum_probs=101.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|+|||+++...                   +.+..++++++..    .+.-
T Consensus        55 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~  134 (259)
T 4e6p_A           55 AAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRG  134 (259)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred             CceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence            46789999999999888877       7999999998521                   3444566666543    2212


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-CC--CCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-PG--ATAPPRE  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~~--~~~~~~~  124 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .++.+..|+||++.+........ +.  .......
T Consensus       135 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  210 (259)
T 4e6p_A          135 GKIINMASQAGRRGE----ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGE  210 (259)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTH
T ss_pred             eEEEEECChhhccCC----CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHH
Confidence            47777 665443221    2345677799999977754       48999999999998865422100 00  0000111


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY  171 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~  171 (258)
                      .....+++.....+.+++|+|+++..++.+..  -.|+.+++.| +..+
T Consensus       211 ~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdg-G~~~  258 (259)
T 4e6p_A          211 KKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDG-GNWM  258 (259)
T ss_dssp             HHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEEST-TSSC
T ss_pred             HHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECc-Chhc
Confidence            11122222223458899999999999887653  2488999987 5444

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=98.89  E-value=3.2e-09  Score=85.17  Aligned_cols=159  Identities=14%  Similarity=0.084  Sum_probs=96.2

Q ss_pred             CceeEEeccCCCHHHHHHhhCC-------C-cEEEEccCccc-------------------hhchHHHHHHHHHh----C
Q 025054            5 INCLIAQGDLHDHESLVKAIKP-------V-DVVISAVGRTE-------------------VEDQFKLIAAIKEV----G   53 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g-------~-d~Vi~~~~~~~-------------------~~~~~~li~aa~~~----g   53 (258)
                      .++.++.+|++|.+++.+++++       . |+|||+++...                   +.+..++++++...    +
T Consensus        63 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  142 (264)
T 2pd6_A           63 GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNG  142 (264)
T ss_dssp             -CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             cceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC
Confidence            3578899999999998888775       3 99999997421                   34455666666543    3


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      ...++|. |+.......    ++...|..+|..++.+.+.       .+++++++|||++++.+...... ..  ..  .
T Consensus       143 ~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~--~~--~  213 (264)
T 2pd6_A          143 CRGSIINISSIVGKVGN----VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ-KV--VD--K  213 (264)
T ss_dssp             CCEEEEEECCTHHHHCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------------C
T ss_pred             CCceEEEECChhhccCC----CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH-HH--HH--H
Confidence            1358887 665322111    2345677799988876643       58999999999998876432111 00  00  0


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHH
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKEL  176 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~  176 (258)
                         ...+.....+.+++|+|+++..++.++.  ..|+.+++.| +..++.+..
T Consensus       214 ---~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~~~~  262 (264)
T 2pd6_A          214 ---ITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTG-GLFMAENLY  262 (264)
T ss_dssp             ---TGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TC-------
T ss_pred             ---HHHhCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC-CceeccccC
Confidence               0000001236789999999999987642  3578899987 545555443

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.89  E-value=1.8e-09  Score=86.75  Aligned_cols=161  Identities=11%  Similarity=0.091  Sum_probs=100.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.+..++++    .+++.+ .
T Consensus        58 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~  136 (263)
T 3ai3_A           58 RVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-G  136 (263)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            47889999999999888876       7999999997421                   223334444    445667 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-CC-CCCCCCCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-PG-ATAPPREN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~~-~~~~~~~~  125 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .|+.+++|+||++++++...... .. ........
T Consensus       137 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  212 (263)
T 3ai3_A          137 GAIIHNASICAVQPL----WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKG  212 (263)
T ss_dssp             EEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHH
T ss_pred             cEEEEECchhhcCCC----CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHH
Confidence            89998 765443221    2345677799999877653       58999999999999865321100 00 00000000


Q ss_pred             -eEeccCC-CceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccC
Q 025054          126 -ILFYGDG-QPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYS  172 (258)
Q Consensus       126 -~~~~g~g-~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t  172 (258)
                       ....... .....+.+++|+|++++.++.++.  ..|+.+++.| +..+|
T Consensus       213 ~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdg-G~~~s  262 (263)
T 3ai3_A          213 YLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDG-GMLKT  262 (263)
T ss_dssp             HHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST-TCCCC
T ss_pred             HHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECC-Ccccc
Confidence             0000000 011247899999999999998653  2478899986 44444

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=98.89  E-value=4e-09  Score=85.05  Aligned_cols=157  Identities=13%  Similarity=0.051  Sum_probs=101.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~   58 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.+..++++++...- +-.++
T Consensus        72 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i  151 (274)
T 1ja9_A           72 QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRI  151 (274)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEE
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEE
Confidence            47789999999999988887       7899999997421                   445667777776641 01578


Q ss_pred             Ec-CCCCCC-CCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-CCCCCC---CCC-CC
Q 025054           59 FP-TEYGSN-VDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-AQPGAT---APP-RE  124 (258)
Q Consensus        59 v~-S~~~~~-~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-~~~~~~---~~~-~~  124 (258)
                      |. |+.... ..    .++...|..+|+.++.+.+.       .++.+++++||.+++.+.... ......   ... ..
T Consensus       152 v~~sS~~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  227 (274)
T 1ja9_A          152 ILTSSIAAVMTG----IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEK  227 (274)
T ss_dssp             EEECCGGGTCCS----CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHH
T ss_pred             EEEcChHhccCC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHH
Confidence            87 665443 21    12345677799999987754       489999999999988654310 000000   000 00


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g  166 (258)
                      .......+.....+++++|+|++++.++.++..  .|+.+++.|
T Consensus       228 ~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~g  271 (274)
T 1ja9_A          228 IDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTG  271 (274)
T ss_dssp             HHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecC
Confidence            011111122223588999999999999986532  578899975

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.88  E-value=1.4e-08  Score=81.35  Aligned_cols=156  Identities=11%  Similarity=0.078  Sum_probs=98.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~vk   56 (258)
                      ++.++.+|++|++++.++++      |+|+|||+++...                   +    ...+.++..+++.+ ..
T Consensus        59 ~~~~~~~D~~~~~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g  137 (260)
T 2z1n_A           59 QVDIVAGDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WG  137 (260)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CE
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-Cc
Confidence            57889999999999998887      7999999998421                   1    22356666667777 88


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCC--CCCCCc-
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGAT--APPREN-  125 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~--~~~~~~-  125 (258)
                      ++|. |+.......    ++...|..+|+.++.+.+.       .|+.+++|+||++..++..........  ...... 
T Consensus       138 ~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  213 (260)
T 2z1n_A          138 RMVYIGSVTLLRPW----QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEA  213 (260)
T ss_dssp             EEEEECCGGGTSCC----TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------
T ss_pred             EEEEECchhhcCCC----CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHH
Confidence            9998 765443221    2344666799998877653       489999999999988764310000000  000000 


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ............+.+++|+|++++.++.++.  ..|+.+++.|
T Consensus       214 ~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdG  256 (260)
T 2z1n_A          214 LKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDG  256 (260)
T ss_dssp             ------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            0000000001136799999999999987652  3578888875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=98.86  E-value=1.2e-08  Score=81.87  Aligned_cols=150  Identities=17%  Similarity=0.161  Sum_probs=99.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCc--cc-------------------hhchHHHHHHH----HHhC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGR--TE-------------------VEDQFKLIAAI----KEVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~--~~-------------------~~~~~~li~aa----~~~g   53 (258)
                      .+.++.+|++|++++.++++       +.|+|||+++.  ..                   +.+..++++++    ++.+
T Consensus        58 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  137 (264)
T 3i4f_A           58 RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN  137 (264)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC
Confidence            57899999999999988876       78999999982  10                   34455666665    6677


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       ..++|. |+.+.....  +.++...|..+|+.++.+.+.       .++.++.|+||++.+.+.......        .
T Consensus       138 -~g~iv~iss~~~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~  206 (264)
T 3i4f_A          138 -FGRIINYGFQGADSAP--GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE--------A  206 (264)
T ss_dssp             -CEEEEEECCTTGGGCC--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH--------H
T ss_pred             -CCeEEEEeechhcccC--CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH--------H
Confidence             788887 665332111  112345677799998877653       589999999999988764332100        0


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ............+.+.+|+|+++..++.++.  -.|+.+++.|
T Consensus       207 ~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdG  249 (264)
T 3i4f_A          207 RQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTG  249 (264)
T ss_dssp             HHC--------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             HHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcC
Confidence            0000011111236789999999999998753  2488999986

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=98.85  E-value=2.8e-09  Score=84.49  Aligned_cols=148  Identities=16%  Similarity=0.153  Sum_probs=97.6

Q ss_pred             ceeE-EeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCC
Q 025054            6 NCLI-AQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~-~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~   54 (258)
                      .+.. +.+|++|.+++.++++       ++|+|||+++...                   +.+    .+.++.++++.+ 
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-  130 (245)
T 2ph3_A           52 PLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-  130 (245)
T ss_dssp             SCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             ceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-
Confidence            3455 8899999998888754       7999999997421                   222    566667777788 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      .+++|. |+.......    ++...|..+|..++.+.+.       .+++++++|||++++++...... .   . ... 
T Consensus       131 ~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~---~-~~~-  200 (245)
T 2ph3_A          131 FGRIVNITSVVGILGN----PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQ-E---V-KEA-  200 (245)
T ss_dssp             CEEEEEECCTHHHHCC----SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-H---H-HHH-
T ss_pred             CCEEEEEeChhhccCC----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCH-H---H-HHH-
Confidence            899998 765322111    1245677799988876653       48999999999998765432100 0   0 000 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       +.. ......+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       201 -~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  240 (245)
T 2ph3_A          201 -YLK-QIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDG  240 (245)
T ss_dssp             -HHH-TCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             -HHh-cCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence             000 0011237799999999999997653  2478888875

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.85  E-value=4.2e-08  Score=77.17  Aligned_cols=136  Identities=16%  Similarity=0.136  Sum_probs=87.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~v   55 (258)
                      ++.++.+|++|.+++.++++       ++|+|||+++...                   +    ...+.++.++++.+ .
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~  129 (234)
T 2ehd_A           51 GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-G  129 (234)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-C
T ss_pred             hceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-C
Confidence            57889999999998887765       7899999997421                   1    12346666777777 8


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      +++|+ |+......    .++...|..+|..++.+.+.       .++.+++||||++...+....        . ..  
T Consensus       130 ~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~-~~--  194 (234)
T 2ehd_A          130 GTIVNVGSLAGKNP----FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT--------P-GQ--  194 (234)
T ss_dssp             EEEEEECCTTTTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------
T ss_pred             cEEEEECCchhcCC----CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc--------c-cc--
Confidence            99998 77654322    12345677799988766543       589999999998876542210        0 00  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEc
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLR  165 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~  165 (258)
                              ..+++.+|+|++++.++.++. ...+.+.+.
T Consensus       195 --------~~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~  225 (234)
T 2ehd_A          195 --------AWKLKPEDVAQAVLFALEMPGHAMVSEIELR  225 (234)
T ss_dssp             -----------CCHHHHHHHHHHHHHSCCSSCCCEEECC
T ss_pred             --------cCCCCHHHHHHHHHHHhCCCcccccceEEEe
Confidence                    115799999999999998763 334444443

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.84  E-value=2.6e-10  Score=91.88  Aligned_cols=165  Identities=12%  Similarity=0.078  Sum_probs=103.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------hhchHHHHHHHHHhC--CccEEEc-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------VEDQFKLIAAIKEVG--NIKRFFP-   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g--~vk~~v~-   60 (258)
                      ++.++.+|++|++++.++++       ++|+|||+++...               +...+.++.++++.+  ...++|. 
T Consensus        59 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~i  138 (267)
T 2gdz_A           59 KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINM  138 (267)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEE
T ss_pred             ceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEe
Confidence            57889999999999888776       4799999998532               124456666665542  1478887 


Q ss_pred             CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054           61 TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD  131 (258)
Q Consensus        61 S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  131 (258)
                      |+.......    +....|..+|+.++.+.+         ..++.+++|+||++...+...+..................
T Consensus       139 sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (267)
T 2gdz_A          139 SSLAGLMPV----AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD  214 (267)
T ss_dssp             CCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH
T ss_pred             CCccccCCC----CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH
Confidence            665433221    223456679998886654         2589999999999987653221100000000000000000


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHH
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKE  175 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e  175 (258)
                      ...+..+++++|+|++++.+++++...|+.+++.|+ ..+|+.|
T Consensus       215 ~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg-~~~~~~~  257 (267)
T 2gdz_A          215 MIKYYGILDPPLIANGLITLIEDDALNGAIMKITTS-KGIHFQD  257 (267)
T ss_dssp             HHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETT-TEEEECC
T ss_pred             HhccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCC-CcccccC
Confidence            011234789999999999999876557889999873 4666544

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=98.84  E-value=9.3e-09  Score=81.73  Aligned_cols=148  Identities=18%  Similarity=0.165  Sum_probs=99.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.+..++++++    ++.+ .
T Consensus        55 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~  133 (246)
T 3osu_A           55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-S  133 (246)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            46788999999999888776       7899999998531                   34556667766    5666 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .|+.+..|+||++...+...+..        ....
T Consensus       134 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--------~~~~  201 (246)
T 3osu_A          134 GAIINLSSVVGAVGN----PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD--------ELKE  201 (246)
T ss_dssp             EEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCH--------HHHH
T ss_pred             CEEEEEcchhhcCCC----CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCH--------HHHH
Confidence            78887 664322111    2345677799988877653       58999999999998865432110        0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g  166 (258)
                      ..........+.+.+|+|++++.+++++..  .|+.+++.|
T Consensus       202 ~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdg  242 (246)
T 3osu_A          202 QMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNG  242 (246)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            001111112366889999999999886532  388899876

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=98.82  E-value=1.3e-08  Score=80.80  Aligned_cols=148  Identities=14%  Similarity=0.130  Sum_probs=97.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|++||+++...                   +.+    .+.++..+++.+ .
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~  133 (246)
T 2uvd_A           55 DAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-H  133 (246)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            47789999999999888776       7999999998421                   222    445555666677 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .++.+++|+||++..++......      . ....
T Consensus       134 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~-~~~~  202 (246)
T 2uvd_A          134 GRIVNIASVVGVTGN----PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDE------N-IKAE  202 (246)
T ss_dssp             EEEEEECCTHHHHCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCT------T-HHHH
T ss_pred             cEEEEECCHHhcCCC----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCH------H-HHHH
Confidence            89998 765332111    1244567799988876542       58999999999998765432110      0 0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +... .....+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       203 ~~~~-~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  242 (246)
T 2uvd_A          203 MLKL-IPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDG  242 (246)
T ss_dssp             HHHT-CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHhc-CCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence            0000 001237899999999999987652  2478888875

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.82  E-value=9.2e-09  Score=83.42  Aligned_cols=160  Identities=18%  Similarity=0.174  Sum_probs=101.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++    ++.+ .
T Consensus        72 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~  150 (281)
T 3s55_A           72 RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-Y  150 (281)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            47788999999999888776       7899999998531                   33445555554    5566 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-----CCCCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-----AQPGATAPP  122 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-----~~~~~~~~~  122 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .|+.+..|+||++.+.+....     .........
T Consensus       151 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  226 (281)
T 3s55_A          151 GRIVTVSSMLGHSAN----FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPT  226 (281)
T ss_dssp             EEEEEECCGGGGSCC----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CC
T ss_pred             CEEEEECChhhcCCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccc
Confidence            78887 665433221    2345677799999877653       489999999999988764320     000000000


Q ss_pred             CC--ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc
Q 025054          123 RE--NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY  171 (258)
Q Consensus       123 ~~--~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~  171 (258)
                      ..  ...+...+..+..+.+++|+|++++.+++++.  -.|+.+++.| +...
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg-G~~~  278 (281)
T 3s55_A          227 LKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDA-GATA  278 (281)
T ss_dssp             HHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred             hhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC-Cccc
Confidence            00  00000112233568899999999999998753  2488899986 5333

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.81  E-value=2.5e-08  Score=79.66  Aligned_cols=148  Identities=14%  Similarity=0.079  Sum_probs=99.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                       +...+.++.++++.+ .
T Consensus        52 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~  130 (254)
T 1hdc_A           52 AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-G  130 (254)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            47788999999999888876       7999999997421                       122346777777777 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .++.+++|+||++.+++...... ...  .  .+.
T Consensus       131 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~--~--~~~  201 (254)
T 1hdc_A          131 GSIVNISSAAGLMGL----ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI-RQG--E--GNY  201 (254)
T ss_dssp             EEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC-CCS--T--TSC
T ss_pred             CEEEEECchhhccCC----CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccch-hHH--H--HHH
Confidence            89998 765443221    2345677799999877653       58999999999998865432111 000  0  000


Q ss_pred             eccCCCceeeee-ccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFN-KEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v-~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       ...+.  ..+. +.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       202 -~~~p~--~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg  240 (254)
T 1hdc_A          202 -PNTPM--GRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDG  240 (254)
T ss_dssp             -TTSTT--SSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -hcCCC--CCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECC
Confidence             00000  1256 89999999999987652  3578888876

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.81  E-value=8.5e-09  Score=82.18  Aligned_cols=150  Identities=15%  Similarity=0.132  Sum_probs=97.1

Q ss_pred             eEEeccCCCHHHHHHhh------CCCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCccEE
Q 025054            8 LIAQGDLHDHESLVKAI------KPVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNIKRF   58 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al------~g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~vk~~   58 (258)
                      .++.+|++|.+++.+++      .+.|+|||+++...                   +.+    .+.++.++++.+ .+++
T Consensus        61 ~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~i  139 (254)
T 2wsb_A           61 ARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAI  139 (254)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred             eEEEEecCCHHHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEE
Confidence            78899999999998876      47899999997421                   222    344555566777 8899


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+........  ..+...|..+|+.++.+.+.       .++++++||||++++++........  ... ..  +..
T Consensus       140 v~isS~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~-~~--~~~  212 (254)
T 2wsb_A          140 VNLGSMSGTIVNR--PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERP--ELF-ET--WLD  212 (254)
T ss_dssp             EEECCGGGTSCCS--SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCH--HHH-HH--HHH
T ss_pred             EEEecchhccCCC--CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccCh--HHH-HH--HHh
Confidence            98 6654332211  11225677799999877654       4899999999999986543211000  000 00  000


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       ......+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       213 -~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  249 (254)
T 2wsb_A          213 -MTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDG  249 (254)
T ss_dssp             -TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -cCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence             0011237899999999999987642  3578888875

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.80  E-value=3.9e-08  Score=78.33  Aligned_cols=146  Identities=10%  Similarity=0.020  Sum_probs=80.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc---c-------------------hhc----hHHHHHHHHHh
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT---E-------------------VED----QFKLIAAIKEV   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~---~-------------------~~~----~~~li~aa~~~   52 (258)
                      .+.++.+|++|++++.++++       +.|+|||+++..   .                   +.+    .+.++..+++.
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~  138 (253)
T 3qiv_A           59 TAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR  138 (253)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence            47789999999999888876       789999999751   0                   222    45566666667


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      + ..++|. |+.....       +...|..+|+.++.+.+.       .++.++.|+||++............       
T Consensus       139 ~-~g~iv~isS~~~~~-------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-------  203 (253)
T 3qiv_A          139 G-GGAIVNQSSTAAWL-------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKE-------  203 (253)
T ss_dssp             T-CEEEEEECC------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------
T ss_pred             C-CCEEEEECCccccC-------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHH-------
Confidence            7 788998 6654431       234566799998877653       4799999999999886543211100       


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .......+.....+.+++|+|+++..++.++.  -.|+.+++.|
T Consensus       204 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  247 (253)
T 3qiv_A          204 MVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDG  247 (253)
T ss_dssp             ----------------CCHHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred             HHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            00001111112235689999999999987653  2588898876

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.80  E-value=1e-08  Score=82.23  Aligned_cols=153  Identities=10%  Similarity=0.065  Sum_probs=99.1

Q ss_pred             ceeEEeccCCCHHHHHHhh--------CCCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAI--------KPVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al--------~g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~   54 (258)
                      ++.++.+|++|++++.+++        .+.|+|||+++...                   +.+..++++++    ++.+ 
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-  137 (260)
T 2ae2_A           59 KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-  137 (260)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            4778899999999888877        46999999998421                   33444555655    4566 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+......    .++...|..+|+.++.+.+.       .++.+++|+||.+..++...... . . .....+
T Consensus       138 ~g~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~-~~~~~~  210 (260)
T 2ae2_A          138 RGNVVFISSVSGALA----VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQ-D-P-EQKENL  210 (260)
T ss_dssp             SEEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTT-S-H-HHHHHH
T ss_pred             CcEEEEEcchhhccC----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhcc-C-h-hhHHHH
Confidence            789998 76543322    12345677799999987754       48999999999998765432110 0 0 000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...........+.+++|+|++++.++.++.  ..|+.+++.|
T Consensus       211 ~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg  252 (260)
T 2ae2_A          211 NKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG  252 (260)
T ss_dssp             HHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            001111111237899999999999987642  3578888886

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.80  E-value=6.7e-09  Score=82.10  Aligned_cols=154  Identities=14%  Similarity=0.123  Sum_probs=99.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCcc---------------c--------hhchHHHHHHHHHhC---
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRT---------------E--------VEDQFKLIAAIKEVG---   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~---------------~--------~~~~~~li~aa~~~g---   53 (258)
                      .+.++.+|++|++++.++++      +.|+|||+++..               .        +.+..++++++...-   
T Consensus        40 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  119 (242)
T 1uay_A           40 DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMREN  119 (242)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            35678999999999999887      789999998742               1        344566777776531   


Q ss_pred             ------CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCC
Q 025054           54 ------NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGAT  119 (258)
Q Consensus        54 ------~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~  119 (258)
                            ...++|. |+.......    ++...|..+|+.++.+.+.       .++.+++||||++++.+...+......
T Consensus       120 ~~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~  195 (242)
T 1uay_A          120 PPDAEGQRGVIVNTASVAAFEGQ----IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKA  195 (242)
T ss_dssp             CCCTTSCSEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHH
T ss_pred             CCCCCCCCeEEEEeCChhhccCC----CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHH
Confidence                  1238887 665332211    2345677799998877643       489999999999998654321100000


Q ss_pred             CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCcc
Q 025054          120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIY  171 (258)
Q Consensus       120 ~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~  171 (258)
                      ... ...++.      ..+++++|+|++++.++.++...|+.+++.| +..+
T Consensus       196 ~~~-~~~~~~------~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g-G~~~  239 (242)
T 1uay_A          196 SLA-AQVPFP------PRLGRPEEYAALVLHILENPMLNGEVVRLDG-ALRM  239 (242)
T ss_dssp             HHH-TTCCSS------CSCCCHHHHHHHHHHHHHCTTCCSCEEEEST-TCCC
T ss_pred             HHH-hhCCCc------ccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC-Ceec
Confidence            000 000110      2367899999999999987544688899986 4343

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=98.80  E-value=3.9e-08  Score=81.41  Aligned_cols=171  Identities=13%  Similarity=0.014  Sum_probs=100.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+..++++++    ++.+ .
T Consensus        60 ~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~  138 (324)
T 3u9l_A           60 DLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-H  138 (324)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            47889999999999998887       8999999998421                   45556677766    6677 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc--
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN--  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~--  125 (258)
                      .++|. |+........   +....|..+|+.++.+.+.       .|+.+++|+||.+.+........ .........  
T Consensus       139 g~iV~isS~~~~~~~~---~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~  214 (324)
T 3u9l_A          139 GLLIWISSSSSAGGTP---PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHS-GVPDDHARQAE  214 (324)
T ss_dssp             EEEEEECCGGGTSCCC---SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------C-BCCSCHHHHHH
T ss_pred             CEEEEEecchhccCCC---CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhccc-CCchHHHHHHh
Confidence            88997 6654432111   1234577799999877653       58999999999996432111000 000000000  


Q ss_pred             e---EeccCCCc--------eeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHH
Q 025054          126 I---LFYGDGQP--------KAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEK  182 (258)
Q Consensus       126 ~---~~~g~g~~--------~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~  182 (258)
                      .   ...+.++.        ..+..+.+|+|++++.++..+........+.||. ..+...+.+.+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~-~~~~~~~~~~~~~  281 (324)
T 3u9l_A          215 YEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPA-EDGADVGFSVLDR  281 (324)
T ss_dssp             HHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTT-CCSHHHHHHHHHH
T ss_pred             hccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCc-chHHHHHHHHHHH
Confidence            0   00000000        0012588999999999998874223333344454 5665555544443

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.80  E-value=7.5e-08  Score=78.08  Aligned_cols=157  Identities=15%  Similarity=0.150  Sum_probs=97.9

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~   54 (258)
                      ..+.++.+|++|.+++.++++       +.|++||+++...                   +.+..++++++    ++.+ 
T Consensus        76 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-  154 (281)
T 3v2h_A           76 GTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-  154 (281)
T ss_dssp             SCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            357889999999999888776       7899999998531                   33445555555    5666 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC--CCCCCC
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA--TAPPRE  124 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~--~~~~~~  124 (258)
                      ..++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||++...+.........  ......
T Consensus       155 ~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  230 (281)
T 3v2h_A          155 WGRIINIASAHGLVAS----PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEE  230 (281)
T ss_dssp             CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------------------
T ss_pred             CCEEEEECCcccccCC----CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHH
Confidence            678887 665433221    2345677799999877653       58999999999998865432111000  000000


Q ss_pred             c--eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 N--ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~--~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .  ......+.....+.+++|+|++++.++.++.  -.|+.+++.|
T Consensus       231 ~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdG  276 (281)
T 3v2h_A          231 QVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDG  276 (281)
T ss_dssp             ---------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEEST
T ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECC
Confidence            0  0112223333458899999999999998763  3588888876

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=98.78  E-value=9.6e-09  Score=85.02  Aligned_cols=166  Identities=12%  Similarity=0.075  Sum_probs=107.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCc----
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNI----   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~v----   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.+..++++++...- .    
T Consensus        87 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~~~  165 (322)
T 3qlj_A           87 EAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYW-RGLSK  165 (322)
T ss_dssp             EEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH-HHccc
Confidence            36788999999999888776       7899999998531                   334455555554321 1    


Q ss_pred             ------cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCC
Q 025054           56 ------KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAP  121 (258)
Q Consensus        56 ------k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~  121 (258)
                            .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+|| +...+......      
T Consensus       166 ~~~~~~g~IV~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~------  234 (322)
T 3qlj_A          166 AGKAVDGRIINTSSGAGLQGS----VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA------  234 (322)
T ss_dssp             TTCCCCEEEEEECCHHHHHCB----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCC------
T ss_pred             cCCCCCcEEEEEcCHHHccCC----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhh------
Confidence                  37887 664332111    1245677799999877653       58999999999 54433322110      


Q ss_pred             CCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc-----------------CHHHHHHHHHH
Q 025054          122 PRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY-----------------SFKELVALWEK  182 (258)
Q Consensus       122 ~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~-----------------t~~e~~~~~~~  182 (258)
                      .  ..   ........+.+.+|+|.+++.++.+..  -.|+.+++.| +...                 ++.|+++.+.+
T Consensus       235 ~--~~---~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdG-G~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~  308 (322)
T 3qlj_A          235 E--MM---ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEG-GKIRVAEGWAHGPQIDKGARWDPAELGPVVAD  308 (322)
T ss_dssp             C-------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEET-TEEEEEECCEEEEEEECSSCCCGGGHHHHHHH
T ss_pred             h--hh---hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECC-CccccCCCcccccccCccCCCCHHHHHHHHHH
Confidence            0  00   011222345689999999999987653  2578888876 4333                 77999999999


Q ss_pred             HhCCcce
Q 025054          183 KIGKTLE  189 (258)
Q Consensus       183 ~~g~~~~  189 (258)
                      .+|.+.+
T Consensus       309 ~~~~~~~  315 (322)
T 3qlj_A          309 LLGKARP  315 (322)
T ss_dssp             HHHHSCC
T ss_pred             HhhccCC
Confidence            9886443

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=98.78  E-value=7.7e-08  Score=76.13  Aligned_cols=139  Identities=16%  Similarity=0.165  Sum_probs=95.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.+..++++++    ++.+ .
T Consensus        59 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  137 (244)
T 2bd0_A           59 LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-S  137 (244)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             eeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-C
Confidence            47889999999999888876       6999999997421                   33445555555    4456 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .++...|..+|+.++.+.+.       .++.+++||||++++.+.....       . ..  
T Consensus       138 ~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~-~~--  203 (244)
T 2bd0_A          138 GHIFFITSVAATKA----FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-------D-EM--  203 (244)
T ss_dssp             EEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-------S-TT--
T ss_pred             CEEEEEecchhcCC----CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-------c-cc--
Confidence            89998 66544322    12345677799999877642       5899999999999886543210       0 00  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                             ...+++++|+|++++.++.++.  ..++.+...+
T Consensus       204 -------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  237 (244)
T 2bd0_A          204 -------QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPT  237 (244)
T ss_dssp             -------GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             -------cccCCCHHHHHHHHHHHHhCCccccchheEEecc
Confidence                   1257899999999999998763  2345555544

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.78  E-value=1.8e-08  Score=80.61  Aligned_cols=151  Identities=15%  Similarity=0.175  Sum_probs=98.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHH----HhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIK----EVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~----~~g~   54 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                    +.+..++++++.    +.+ 
T Consensus        63 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-  141 (260)
T 3awd_A           63 DVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-  141 (260)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-
Confidence            47889999999999988876       7899999997321                    233445555554    456 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcC-CCCCCCCCCCCCCc
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLP-TMAQPGATAPPREN  125 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~-~~~~~~~~~~~~~~  125 (258)
                      ..++|. |+........  ..+...|..+|+.++.+.+.       .++++++||||++++.+.. .......      .
T Consensus       142 ~~~iv~~sS~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~------~  213 (260)
T 3awd_A          142 QGVIVAIGSMSGLIVNR--PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPEL------Y  213 (260)
T ss_dssp             CEEEEEECCGGGTSCCS--SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHH------H
T ss_pred             CCEEEEEecchhcccCC--CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHH------H
Confidence            788887 6543322111  11225677799999887754       5899999999999987643 1110000      0


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..+.. +.....+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       214 ~~~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  255 (260)
T 3awd_A          214 DAWIA-GTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDA  255 (260)
T ss_dssp             HHHHH-TCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHh-cCCcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECC
Confidence            00000 0111237899999999999987642  3577899886

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.78  E-value=3.6e-08  Score=79.01  Aligned_cols=149  Identities=13%  Similarity=0.123  Sum_probs=96.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc--------------c-----------hhchHHHHHHHHHh-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT--------------E-----------VEDQFKLIAAIKEV-   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~--------------~-----------~~~~~~li~aa~~~-   52 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++..              .           +.+..++++++... 
T Consensus        59 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  138 (265)
T 2o23_A           59 NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEM  138 (265)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            57889999999999998887       899999999742              1           34455666766554 


Q ss_pred             ---------CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC
Q 025054           53 ---------GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ  115 (258)
Q Consensus        53 ---------g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~  115 (258)
                               + ..++|. |+.......    ++...|..+|+.++.+.+.       .++.+++|+||++..++......
T Consensus       139 ~~~~~~~~~~-~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  213 (265)
T 2o23_A          139 GQNEPDQGGQ-RGVIINTASVAAFEGQ----VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE  213 (265)
T ss_dssp             TTSCCCTTSC-CEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------
T ss_pred             HhcccccCCC-CcEEEEeCChhhcCCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH
Confidence                     5 678888 665332211    2345677799988876643       58999999999998765432110


Q ss_pred             CCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          116 PGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       116 ~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                       .   . ...+  .........+.+.+|+|++++.++.++...|+.+.+.|
T Consensus       214 -~---~-~~~~--~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdg  257 (265)
T 2o23_A          214 -K---V-CNFL--ASQVPFPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDG  257 (265)
T ss_dssp             --------CHH--HHTCSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             -H---H-HHHH--HHcCCCcCCCCCHHHHHHHHHHHhhcCccCceEEEECC
Confidence             0   0 0000  00000002367999999999999876545688898876

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=98.77  E-value=1.1e-08  Score=81.13  Aligned_cols=148  Identities=14%  Similarity=0.124  Sum_probs=96.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.+..++++++.    +.+ .
T Consensus        52 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  130 (244)
T 1edo_A           52 QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-K  130 (244)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-C
Confidence            47788999999999988876       7899999997421                   334455555554    356 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    ++...|..+|..++.+.+.       .++.++++|||++.+.+...+.. .   .. ..  
T Consensus       131 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~---~~-~~--  199 (244)
T 1edo_A          131 GRIINIASVVGLIGN----IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE-D---ME-KK--  199 (244)
T ss_dssp             EEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH-H---HH-HH--
T ss_pred             CEEEEECChhhcCCC----CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh-H---HH-HH--
Confidence            89998 765332111    1345677799988776643       58999999999998765432110 0   00 00  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC---CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR---TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~---~~~~~~~l~g  166 (258)
                      +.. ......+++.+|+|++++.++.++.   ..|+.+++.|
T Consensus       200 ~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~g  240 (244)
T 1edo_A          200 ILG-TIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             HHT-SCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             Hhh-cCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCC
Confidence            000 0001236799999999999985442   2478888875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.77  E-value=7e-08  Score=77.13  Aligned_cols=153  Identities=12%  Similarity=0.058  Sum_probs=97.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHh---
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEV---   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~---   52 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                       +.+..++++++...   
T Consensus        54 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  133 (257)
T 3tpc_A           54 AVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQ  133 (257)
T ss_dssp             -CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            47788999999999888876       7999999998431                       34455666666542   


Q ss_pred             -------CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCC
Q 025054           53 -------GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPG  117 (258)
Q Consensus        53 -------g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~  117 (258)
                             + -.++|. |+.......    ++...|..+|+.++.+.+.       .|+.+..|+||++...+........
T Consensus       134 ~~~~~~~~-~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~  208 (257)
T 3tpc_A          134 GEPDADGE-RGVIVNTASIAAFDGQ----IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDV  208 (257)
T ss_dssp             SCCCTTSC-CEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------
T ss_pred             ccccCCCC-CeEEEEEechhhccCC----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHH
Confidence                   3 457887 665432211    2345677799998876543       5899999999999886543321100


Q ss_pred             CCCCCCCceEeccCCCce-eeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccC
Q 025054          118 ATAPPRENILFYGDGQPK-AIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYS  172 (258)
Q Consensus       118 ~~~~~~~~~~~~g~g~~~-~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t  172 (258)
                          .    ......... ..+.+.+|+|+++..++++.--.|+.+++.| +..++
T Consensus       209 ----~----~~~~~~~p~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdG-G~~~~  255 (257)
T 3tpc_A          209 ----Q----DALAASVPFPPRLGRAEEYAALVKHICENTMLNGEVIRLDG-ALRMA  255 (257)
T ss_dssp             -------------CCSSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST-TCCC-
T ss_pred             ----H----HHHHhcCCCCCCCCCHHHHHHHHHHHcccCCcCCcEEEECC-CccCC
Confidence                0    000000000 2367899999999999987544688899986 54443

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.75  E-value=4.2e-08  Score=77.96  Aligned_cols=148  Identities=16%  Similarity=0.118  Sum_probs=93.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~~v   59 (258)
                      .+.++.+|++|.+++.++++   +.|+|||+++...                   +.+..++++++    ++.+ ..++|
T Consensus        61 ~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv  139 (249)
T 3f9i_A           61 NYTIEVCNLANKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRII  139 (249)
T ss_dssp             SEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEE
T ss_pred             CccEEEcCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEE
Confidence            57888999999999988876   6899999998421                   23344555544    4456 67888


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD  131 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  131 (258)
                      . |+.......    ++...|..+|+.++.+.+.       .++.++.++||++...+...+..        ........
T Consensus       140 ~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~  207 (249)
T 3f9i_A          140 NISSIVGIAGN----PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE--------KQREAIVQ  207 (249)
T ss_dssp             EECCCCC--CC----SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH--------HHHHHHHH
T ss_pred             EEccHHhccCC----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH--------HHHHHHHh
Confidence            8 665443221    2345677799988876653       58999999999988765432110        00000111


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +.....+.+++|+|+++..+++++.  -.|+.+++.|
T Consensus       208 ~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  244 (249)
T 3f9i_A          208 KIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNG  244 (249)
T ss_dssp             HCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECC
Confidence            1122347789999999999998753  2488899876

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.75  E-value=2e-08  Score=80.32  Aligned_cols=157  Identities=15%  Similarity=0.077  Sum_probs=98.6

Q ss_pred             eEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccE
Q 025054            8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKR   57 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~   57 (258)
                      .++.+|++|++++.++++       +.|+|||+++...                   +.+..++++++    ++.+ ..+
T Consensus        52 ~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~  130 (256)
T 2d1y_A           52 AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGA  130 (256)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEE
T ss_pred             CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcE
Confidence            678899999998887765       6899999997421                   23444555554    4456 789


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +|. |+.......    ++...|..+|+.++.+.+.       .++.+++|+||.+...+........ . .........
T Consensus       131 iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~-~~~~~~~~~  204 (256)
T 2d1y_A          131 IVNVASVQGLFAE----QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALS-P-DPERTRRDW  204 (256)
T ss_dssp             EEEECCGGGTSBC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC----------CHHH
T ss_pred             EEEEccccccCCC----CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccc-c-CCHHHHHHH
Confidence            998 765433221    2345677799999877653       4899999999999876532210000 0 000000011


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYS  172 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t  172 (258)
                      ........+++++|+|++++.+++++.  ..|+.+++.| +..++
T Consensus       205 ~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~g-G~~~~  248 (256)
T 2d1y_A          205 EDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDG-GMTAS  248 (256)
T ss_dssp             HTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGB
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECC-Ccccc
Confidence            111112347899999999999987752  3578899986 43444

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.75  E-value=3.8e-08  Score=78.15  Aligned_cols=148  Identities=14%  Similarity=0.115  Sum_probs=97.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|+|||+++...                   +.+..++++++    ++.+ .
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  133 (247)
T 3lyl_A           55 KARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-W  133 (247)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            47889999999998888775       5799999998531                   23344455544    4455 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .+....|..+|+.++.+.+.       .++.++.++||++...+...+..        ....
T Consensus       134 g~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~  201 (247)
T 3lyl_A          134 GRIISIGSVVGSAG----NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD--------EQKS  201 (247)
T ss_dssp             EEEEEECCTHHHHC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH--------HHHH
T ss_pred             eEEEEEcchhhccC----CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH--------HHHH
Confidence            68887 66432211    12345677799988776653       58999999999988765432110        0111


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+++|+|+++..++.+..  -.|+.+++.|
T Consensus       202 ~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          202 FIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNG  242 (247)
T ss_dssp             HHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence            11122222347899999999999987653  2488899976

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.74  E-value=1.3e-07  Score=75.13  Aligned_cols=149  Identities=14%  Similarity=0.058  Sum_probs=92.9

Q ss_pred             ceeEEeccCCCHHHHHHhh-------CCCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAI-------KPVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.+++       .++|+|||+++...                   +.+    .+.++..+++.+ .
T Consensus        55 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~  133 (249)
T 2ew8_A           55 RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-W  133 (249)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            4778999999999888775       47999999997421                   222    344444466777 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcC-CCCCCCCCCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLP-TMAQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~-~~~~~~~~~~~~~~~  126 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .++.+++|+||++..++.. ...... .... ..+
T Consensus       134 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~-~~~  207 (249)
T 2ew8_A          134 GRIINLTSTTYWLKI----EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVL-PNM  207 (249)
T ss_dssp             EEEEEECCGGGGSCC----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CT
T ss_pred             eEEEEEcchhhccCC----CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHH-HHh
Confidence            89998 765433221    2345677799999877654       4899999999999886643 211000 0000 000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..+     ...+.+++|+|++++.++.++.  ..|+.+.+.|
T Consensus       208 ~~~-----~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdG  244 (249)
T 2ew8_A          208 LQA-----IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDG  244 (249)
T ss_dssp             TSS-----SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred             hCc-----cCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence            011     1136799999999999987642  3578888875

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=98.74  E-value=3e-08  Score=80.58  Aligned_cols=148  Identities=11%  Similarity=0.115  Sum_probs=93.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+    .+.++..+++.+ .
T Consensus        94 ~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~  172 (285)
T 2c07_A           94 ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-Y  172 (285)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-C
T ss_pred             ceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-C
Confidence            47788999999999888774       6899999997431                   233    334444445667 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .++.+++|+||.+.+.+...... .   .. ..  
T Consensus       173 ~~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~---~~-~~--  241 (285)
T 2c07_A          173 GRIINISSIVGLTGN----VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE-Q---IK-KN--  241 (285)
T ss_dssp             EEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH-H---HH-HH--
T ss_pred             CEEEEECChhhccCC----CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCH-H---HH-HH--
Confidence            89998 665332111    1245677799988876643       48999999999998765432110 0   00 00  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +.. ......+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       242 ~~~-~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~g  281 (285)
T 2c07_A          242 IIS-NIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDG  281 (285)
T ss_dssp             HHT-TCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHh-hCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCC
Confidence            000 0001137899999999999987653  2578888875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=98.73  E-value=1.6e-07  Score=75.32  Aligned_cols=150  Identities=12%  Similarity=0.007  Sum_probs=95.0

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----h-C
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----V-G   53 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~-g   53 (258)
                      ..+.++.+|++|.+++.++++       +.|+|||+++...                   +.+..++++++..    . +
T Consensus        73 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  152 (266)
T 3o38_A           73 GRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH  152 (266)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC
T ss_pred             CceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            358899999999999888775       6799999998521                   3344556665544    2 4


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       ..++|. |+.......    ++...|..+|+.++.+.+.       .++.++.|+||++...+........       .
T Consensus       153 -~~~iv~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-------~  220 (266)
T 3o38_A          153 -GGVIVNNASVLGWRAQ----HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSE-------L  220 (266)
T ss_dssp             -CEEEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------
T ss_pred             -CeEEEEeCCHHHcCCC----CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHH-------H
Confidence             567887 664433221    2345677799999877653       5899999999998876543221100       0


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ............+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       221 ~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          221 LDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             ------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence            1111111112346789999999999988642  3578888875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=98.73  E-value=2.9e-08  Score=79.41  Aligned_cols=151  Identities=13%  Similarity=0.086  Sum_probs=95.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+..++++++.    +.+..
T Consensus        58 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~  137 (261)
T 1gee_A           58 EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIK  137 (261)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCC
Confidence            47789999999999888776       7899999997421                   223344444443    33313


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .++...|..+|+.++.+.+.       .++.++++|||++++++........    .. ...
T Consensus       138 ~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----~~-~~~  208 (261)
T 1gee_A          138 GTVINMSSVHEKIP----WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP----EQ-RAD  208 (261)
T ss_dssp             CEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSH----HH-HHH
T ss_pred             CEEEEeCCHHhcCC----CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccCh----hH-HHH
Confidence            68887 76544322    12345677799888876643       4899999999999887543210000    00 000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +. .......+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       209 ~~-~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  248 (261)
T 1gee_A          209 VE-SMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADG  248 (261)
T ss_dssp             HH-TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HH-hcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcC
Confidence            00 00001236899999999999987642  3578888876

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=98.73  E-value=9.9e-09  Score=81.93  Aligned_cols=150  Identities=15%  Similarity=0.105  Sum_probs=95.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCc-cc-------------------hhchHHHHHHHH----HhC-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGR-TE-------------------VEDQFKLIAAIK----EVG-   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~-~~-------------------~~~~~~li~aa~----~~g-   53 (258)
                      ++.++.+|++|++++.++++       ++|+|||+++. ..                   +.+..++++++.    +.+ 
T Consensus        58 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  137 (258)
T 3afn_B           58 DAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAK  137 (258)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhccc
Confidence            47889999999999998887       89999999985 11                   223344444332    221 


Q ss_pred             ---CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC
Q 025054           54 ---NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP  122 (258)
Q Consensus        54 ---~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~  122 (258)
                         ...++|. |+......   +.++...|..+|+.++.+.+.       .+++++++|||++++.+......       
T Consensus       138 ~~~~~~~iv~~sS~~~~~~---~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------  207 (258)
T 3afn_B          138 ASGQTSAVISTGSIAGHTG---GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQ-------  207 (258)
T ss_dssp             HHTSCEEEEEECCTHHHHC---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCH-------
T ss_pred             CCCCCcEEEEecchhhccC---CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCH-------
Confidence               1267887 65432210   112345677799999887753       48999999999998875432100       


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCC---CCCceEEEcC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR---TLNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~---~~~~~~~l~g  166 (258)
                       ........+.....+++++|+|++++.++.++.   ..|+.+++.|
T Consensus       208 -~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~g  253 (258)
T 3afn_B          208 -DVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDING  253 (258)
T ss_dssp             -HHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEEST
T ss_pred             -HHHHHHhccCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECC
Confidence             000000011111247899999999999987642   2478899886

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.73  E-value=3.1e-08  Score=79.47  Aligned_cols=155  Identities=14%  Similarity=0.073  Sum_probs=97.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      ++.++.+|++|++++.++++       ++|+|||+++...                   +.+..++++++..    .++.
T Consensus        59 ~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~  138 (263)
T 3ak4_A           59 GGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTK  138 (263)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            57789999999999988887       7999999998421                   2333455555543    3324


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-----CCCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-----QPGATAPP  122 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-----~~~~~~~~  122 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .|+.+++|+||++++.+.....     ..+. .. 
T Consensus       139 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~-  212 (263)
T 3ak4_A          139 GVIVNTASLAAKVGA----PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGM-TP-  212 (263)
T ss_dssp             CEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTS-CH-
T ss_pred             eEEEEecccccccCC----CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhcccccccccc-Cc-
Confidence            68887 665443221    2345677799998877654       4899999999999886532110     0000 00 


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ......+........+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       213 ~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg  258 (263)
T 3ak4_A          213 EAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTG  258 (263)
T ss_dssp             HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECc
Confidence            0000000001111237899999999999997652  3578899886

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.72  E-value=8e-08  Score=77.07  Aligned_cols=150  Identities=15%  Similarity=0.066  Sum_probs=97.7

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~   54 (258)
                      ..+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++    ++.+ 
T Consensus        60 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-  138 (262)
T 3pk0_A           60 GKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-  138 (262)
T ss_dssp             SCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            357889999999999888776       7999999998531                   23344444544    4457 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.......   .++...|..+|+.++.+.+.       .|+.+..|+||++..........        ...
T Consensus       139 ~g~iv~isS~~~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--------~~~  207 (262)
T 3pk0_A          139 SGRVVLTSSITGPITG---YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGE--------EYI  207 (262)
T ss_dssp             SCEEEEECCSBTTTBC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCH--------HHH
T ss_pred             CcEEEEEechhhccCC---CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCH--------HHH
Confidence            778887 665432111   12345677799999877754       58999999999998764322100        000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...........+.+.+|+|+++..++.++.  -.|+.+++.|
T Consensus       208 ~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG  249 (262)
T 3pk0_A          208 ASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDG  249 (262)
T ss_dssp             HHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            000000001126789999999999987653  3588899986

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.71  E-value=1.1e-07  Score=76.19  Aligned_cols=156  Identities=15%  Similarity=0.168  Sum_probs=94.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|++||+++...                   +.+..+++++    +++.+ .
T Consensus        56 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~  134 (260)
T 1x1t_A           56 KVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-F  134 (260)
T ss_dssp             CEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence            47788999999999888776       7899999997421                   2233334444    45567 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCC--CCC-CC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGAT--APP-RE  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~--~~~-~~  124 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .++.++.|+||++..++..........  ... ..
T Consensus       135 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  210 (260)
T 1x1t_A          135 GRIINIASAHGLVAS----ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQET  210 (260)
T ss_dssp             EEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------
T ss_pred             CEEEEECcHHhCcCC----CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHH
Confidence            89998 765443221    2345677799999877653       489999999999988654321100000  000 00


Q ss_pred             ce-EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 NI-LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~~-~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .. .+.........+.+++|+|++++.++.++.  ..|+.+++.|
T Consensus       211 ~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdg  255 (260)
T 1x1t_A          211 AARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             ----CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence            00 010000011237899999999999987642  3578888875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.70  E-value=5.3e-08  Score=78.28  Aligned_cols=152  Identities=14%  Similarity=0.152  Sum_probs=98.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~   54 (258)
                      ++.++.+|++|++++.++++       +.|+|||+++...                        +...+.++..+++.+ 
T Consensus        65 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-  143 (267)
T 1iy8_A           65 EVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-  143 (267)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-
Confidence            47889999999999888776       6899999987421                        122345666667777 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC--C-CCCCCCCCC
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM--A-QPGATAPPR  123 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~--~-~~~~~~~~~  123 (258)
                      ..++|. |+.......    ++...|..+|+.++.+.+.       .|+.+++|+||++..++....  . ...   ...
T Consensus       144 ~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~  216 (267)
T 1iy8_A          144 SGMVVNTASVGGIRGI----GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE---NPR  216 (267)
T ss_dssp             CCEEEEECCGGGTSBC----SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT---CHH
T ss_pred             CCEEEEEcchhhccCC----CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChh---hhh
Confidence            789998 765443221    2345677799999877653       589999999999987653221  0 000   000


Q ss_pred             Cce-EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENI-LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~-~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ... .+. .......+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       217 ~~~~~~~-~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdG  261 (267)
T 1iy8_A          217 KAAEEFI-QVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG  261 (267)
T ss_dssp             HHHHHHH-TTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hHHHHHh-ccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            000 000 00011236799999999999987652  3578888876

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.70  E-value=1.9e-07  Score=74.74  Aligned_cols=151  Identities=9%  Similarity=-0.037  Sum_probs=95.4

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhchHHHHHHH----HHhCCc
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .++.++.+|++|.+++.++++       +.|+|||+++...                  +.+..++++++    ++.+ .
T Consensus        71 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~  149 (260)
T 3gem_A           71 AGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-V  149 (260)
T ss_dssp             HTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-S
T ss_pred             cCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence            467889999999998888775       6899999998431                  33344555554    4455 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      .++|. |+......    .++...|..+|+.++.+.+.      .++.+..|+||.+........   ...   . .  +
T Consensus       150 g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~---~~~---~-~--~  216 (260)
T 3gem_A          150 ADIVHISDDVTRKG----SSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA---AYR---A-N--A  216 (260)
T ss_dssp             CEEEEECCGGGGTC----CSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------------
T ss_pred             cEEEEECChhhcCC----CCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH---HHH---H-H--H
Confidence            78887 66544322    12345677799999877654      359999999999876432210   000   0 0  0


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCcc
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIY  171 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~  171 (258)
                      . .......+.+.+|+|++++.+++.+.-.|+.+++.| +..+
T Consensus       217 ~-~~~p~~r~~~~edva~~v~~L~~~~~itG~~i~vdG-G~~~  257 (260)
T 3gem_A          217 L-AKSALGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNG-GRHV  257 (260)
T ss_dssp             ----CCSCCCCCTHHHHHHHHHHHHCSSCCSCEEEEST-TTTT
T ss_pred             H-hcCCCCCCCCHHHHHHHHHHHhhCCCCCCCEEEECC-Cccc
Confidence            0 000011255789999999999865544688999986 5444

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=98.70  E-value=3.7e-08  Score=78.90  Aligned_cols=153  Identities=14%  Similarity=0.099  Sum_probs=97.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      ++.++.+|++|.+++.++++       ++|+|||+++...                   +.+..++++++..    .+..
T Consensus        65 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~  144 (265)
T 1h5q_A           65 KTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQK  144 (265)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             eeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCC
Confidence            57889999999998888775       4899999997521                   3344556666543    3324


Q ss_pred             cEEEc-CCCCCCCCC---CCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           56 KRFFP-TEYGSNVDA---GHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~---~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      .++|+ |+.......   ..+..+...|..+|+.++.+.+.       .++.+++||||++.+.+...... .       
T Consensus       145 ~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-------  216 (265)
T 1h5q_A          145 GSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK-K-------  216 (265)
T ss_dssp             EEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH-H-------
T ss_pred             ceEEEeCCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccch-h-------
Confidence            78888 664332211   11111245577799999877754       48999999999998876432100 0       


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .............+++.+|+|++++.++.++.  ..|+.+++.|
T Consensus       217 ~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  260 (265)
T 1h5q_A          217 IRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDG  260 (265)
T ss_dssp             HHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             HHHHHHhcCcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecC
Confidence            00000000011237899999999999987653  3578898876

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.70  E-value=5.4e-08  Score=77.80  Aligned_cols=155  Identities=14%  Similarity=0.105  Sum_probs=100.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhchHHHHHHH----HHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VEDQFKLIAAI----KEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~~~~li~aa----~~~g~vk   56 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                  +.+..++++++    ++.+ ..
T Consensus        62 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g  140 (256)
T 3gaf_A           62 KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GG  140 (256)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CE
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-Cc
Confidence            47789999999998888776       7899999997521                  33445555554    4556 67


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+......    .++...|..+|+.++.+.+.       .++.+..|+||++...+........       ....
T Consensus       141 ~iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-------~~~~  209 (256)
T 3gaf_A          141 AILNISSMAGENT----NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPE-------IERA  209 (256)
T ss_dssp             EEEEECCGGGTCC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHH-------HHHH
T ss_pred             EEEEEcCHHHcCC----CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHH-------HHHH
Confidence            8887 66544322    12345677799999877753       4899999999999876532211000       0000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCH
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSF  173 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~  173 (258)
                      .........+.+++|+|++++.++.+..  -.|+.+++.| +...++
T Consensus       210 ~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdg-G~~~~~  255 (256)
T 3gaf_A          210 MLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSG-GGVQEL  255 (256)
T ss_dssp             HHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TSCCC-
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECC-CccccC
Confidence            0111111236789999999999987652  2488999987 545443

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.69  E-value=1.3e-07  Score=77.23  Aligned_cols=153  Identities=14%  Similarity=0.099  Sum_probs=99.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHhCCcc--
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVGNIK--   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g~vk--   56 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                    +.+..++++++...- .+  
T Consensus       101 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~~g  179 (294)
T 3r3s_A          101 KAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL-PKGA  179 (294)
T ss_dssp             CEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-CTTC
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-hcCC
Confidence            47788999999998877764       7899999998421                    445567777776654 33  


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+......    .+....|..+|+.++.+.+.       .|+.+..|+||++...+........      .....
T Consensus       180 ~Iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~------~~~~~  249 (294)
T 3r3s_A          180 SIITTSSIQAYQP----SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ------DKIPQ  249 (294)
T ss_dssp             EEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCG------GGSTT
T ss_pred             EEEEECChhhccC----CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCH------HHHHH
Confidence            7887 66544322    12345677799999877653       4899999999999876521100000      00000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCc
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNI  170 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~  170 (258)
                      .........+.+.+|+|++++.++.+..  -.|+.+++.| |..
T Consensus       250 ~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG-G~~  292 (294)
T 3r3s_A          250 FGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCG-GEH  292 (294)
T ss_dssp             TTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST-TCC
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC-Ccc
Confidence            1111111236789999999999987653  2478899986 433

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.69  E-value=1.1e-07  Score=77.43  Aligned_cols=152  Identities=13%  Similarity=-0.006  Sum_probs=97.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-----------------hhchHHHHHHHHHhCCccEEEc-CCCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-----------------VEDQFKLIAAIKEVGNIKRFFP-TEYG   64 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-----------------~~~~~~li~aa~~~g~vk~~v~-S~~~   64 (258)
                      .++++.+|++|.+++.++++   +.|+|||+++...                 +.+..++++++.... .+|+|. |+..
T Consensus        63 ~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~  141 (291)
T 3rd5_A           63 QVEVRELDLQDLSSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMA  141 (291)
T ss_dssp             EEEEEECCTTCHHHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGG
T ss_pred             CeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechh
Confidence            57889999999999999887   5699999998521                 566788899998887 889998 6643


Q ss_pred             CCCCCC---------CCCCCCccchhhHHHHHHHHHh-------CC--CCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           65 SNVDAG---------HPIEPAKSGYARKAKIRRAIEA-------EG--IPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        65 ~~~~~~---------~~~~~~~~~~~~k~~~e~~l~~-------~~--~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ......         .+.++...|..+|+.++.+.+.       .+  +.+..|+||++...+.......    ......
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~----~~~~~~  217 (291)
T 3rd5_A          142 HWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK----LGDALM  217 (291)
T ss_dssp             GTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------
T ss_pred             hccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH----HHHHHH
Confidence            321110         1122234566799998876643       35  8999999999977654432110    000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                      ..    -..+-..+.+|+|+.++.++.++...|+.+.+.|
T Consensus       218 ~~----~~~~~~~~~~~~A~~~~~l~~~~~~~G~~~~vdg  253 (291)
T 3rd5_A          218 SA----ATRVVATDADFGARQTLYAASQDLPGDSFVGPRF  253 (291)
T ss_dssp             -----------CHHHHHHHHHHHHHHHSCCCTTCEEEETT
T ss_pred             HH----HHHHHhCCHHHHHHHHHHHHcCCCCCCceeCCcc
Confidence            01    1112244699999999999988644577777754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=98.69  E-value=1.2e-07  Score=76.39  Aligned_cols=154  Identities=17%  Similarity=0.111  Sum_probs=98.1

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~   54 (258)
                      ..+.++.+|++|.+++.++++       +.|+|||+++...                   +.+..++++++    ++.+ 
T Consensus        75 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  153 (269)
T 3gk3_A           75 RDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-  153 (269)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            347889999999998888776       7899999998531                   23334444444    4466 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.......    ++...|..+|+.++.+.+.       .++.++.|+||++...+........   ...   
T Consensus       154 ~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~---  223 (269)
T 3gk3_A          154 FGRIVNIGSVNGSRGA----FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDV---LEA---  223 (269)
T ss_dssp             CEEEEEECCHHHHHCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC----------C---
T ss_pred             CCEEEEeCChhhccCC----CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhH---HHH---
Confidence            678887 664332211    1245677799988876643       5899999999998876543321100   000   


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY  171 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~  171 (258)
                      . .........+.+.+|+|++++.++.++.  -.|+.+++.| +..+
T Consensus       224 ~-~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg-G~~~  268 (269)
T 3gk3_A          224 K-ILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAING-GMHM  268 (269)
T ss_dssp             C-SGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST-TSCC
T ss_pred             H-hhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECC-CEeC
Confidence            0 0001111236689999999999998753  3588899986 5343

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=98.69  E-value=4e-08  Score=79.13  Aligned_cols=148  Identities=14%  Similarity=0.134  Sum_probs=97.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.+..++++++    ++.+ .
T Consensus        79 ~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~  157 (269)
T 4dmm_A           79 EAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-S  157 (269)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            47789999999999888776       7899999998531                   33344555554    4556 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||++...+......        ..  
T Consensus       158 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--------~~--  223 (269)
T 4dmm_A          158 GRIINIASVVGEMGN----PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA--------EK--  223 (269)
T ss_dssp             CEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH--------HH--
T ss_pred             cEEEEECchhhcCCC----CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH--------HH--
Confidence            78887 664332111    1245677799988876643       58999999999988765432100        00  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC---CCCceEEEcCCCCc
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR---TLNKTLYLRPPKNI  170 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~---~~~~~~~l~g~~~~  170 (258)
                      + ........+.+.+|+|++++.++.++.   -.|+.+++.| +..
T Consensus       224 ~-~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdG-G~~  267 (269)
T 4dmm_A          224 L-LEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG-GLV  267 (269)
T ss_dssp             H-GGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEEST-TSC
T ss_pred             H-HhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECC-Cee
Confidence            0 000001136788999999999998752   2488899986 433

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.69  E-value=1.7e-07  Score=74.93  Aligned_cols=159  Identities=14%  Similarity=0.098  Sum_probs=90.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHH----HhC-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIK----EVG-   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~----~~g-   53 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                    +.+..++++++.    +.+ 
T Consensus        56 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  135 (261)
T 3n74_A           56 AALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGA  135 (261)
T ss_dssp             TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            47889999999998888776       7899999997421                    233344444443    321 


Q ss_pred             --CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           54 --NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        54 --~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                        ...++|. |+.......    +....|..+|+.++.+.+.       .++.++.++||.+...+...+....    ..
T Consensus       136 ~~~~~~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~  207 (261)
T 3n74_A          136 KGQECVILNVASTGAGRPR----PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGED----SE  207 (261)
T ss_dssp             TTCCEEEEEECCTTTTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------
T ss_pred             CCCCeEEEEeCchhhcCCC----CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccC----cH
Confidence              0235776 665443221    2234566799999877653       5899999999998876554321100    00


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCH
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSF  173 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~  173 (258)
                      ..............+++++|+|+++..++.+..  -.|+.+++.| +..++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdg-G~~~~~  258 (261)
T 3n74_A          208 EIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDG-GRSIGG  258 (261)
T ss_dssp             ---------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST-TTTC--
T ss_pred             HHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecC-CcccCC
Confidence            001111111112247899999999999987642  3588899987 545543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.68  E-value=3.7e-08  Score=78.58  Aligned_cols=150  Identities=15%  Similarity=0.126  Sum_probs=95.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|+|||+++...                   +    ...+.++.++++.+  
T Consensus        53 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--  130 (253)
T 1hxh_A           53 RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--  130 (253)
T ss_dssp             TEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--
Confidence            47889999999998887776       4699999998521                   1    13344555555555  


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------C--CCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------E--GIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~--~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .  ++.+++||||++++++........   .. ..
T Consensus       131 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~-~~  202 (253)
T 1hxh_A          131 GSIINMASVSSWLPI----EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG---VS-KE  202 (253)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT---CC-HH
T ss_pred             CEEEEEcchhhcCCC----CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchh---hh-HH
Confidence            68887 665443221    2344677799999877654       3  899999999999986543211000   00 00


Q ss_pred             eEeccC--CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGD--GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~--g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      . +...  ......+.+++|+|++++.++.++.  ..|+.+.+.|
T Consensus       203 ~-~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  246 (253)
T 1hxh_A          203 M-VLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADN  246 (253)
T ss_dssp             H-HBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             H-HhhhhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECC
Confidence            0 0000  0001236899999999999998753  3478888875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.67  E-value=5.5e-08  Score=78.24  Aligned_cols=148  Identities=16%  Similarity=0.141  Sum_probs=95.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|+|||+++...                   +.+    .+.++..+++.+ .
T Consensus        74 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~  152 (266)
T 3grp_A           74 DVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-Y  152 (266)
T ss_dssp             SEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             ceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence            57889999999998888776       7899999998531                   223    455555556667 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .|+.+..|+||++...+......        ....
T Consensus       153 g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~--------~~~~  220 (266)
T 3grp_A          153 GRIINITSIVGVVGN----PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNE--------KQKE  220 (266)
T ss_dssp             EEEEEECCC-----------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCH--------HHHH
T ss_pred             cEEEEECCHHHcCCC----CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCH--------HHHH
Confidence            78998 665433221    1245667799988876653       58999999999998765432110        0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       221 ~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 3grp_A          221 AIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHING  261 (266)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            01111111236688999999999987653  2478888875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.67  E-value=1.2e-07  Score=76.45  Aligned_cols=149  Identities=10%  Similarity=0.055  Sum_probs=99.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHH----HHhC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAI----KEVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa----~~~g   53 (258)
                      ++.++.+|++|.+++.++++       +.|++||+++...                     +.+..++++++    ++.+
T Consensus        58 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  137 (271)
T 3tzq_B           58 GAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG  137 (271)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            57788999999999888876       7899999998531                     33445666666    6666


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       ..++|. |+......    .++...|..+|+.++.+.+.       .|+.+..|+||++.+........       ...
T Consensus       138 -~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-------~~~  205 (271)
T 3tzq_B          138 -GGAIVNISSATAHAA----YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP-------QPI  205 (271)
T ss_dssp             -CEEEEEECCGGGTSB----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C-------HHH
T ss_pred             -CCEEEEECCHHHcCC----CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC-------HHH
Confidence             788998 66544322    12345677799999877653       58999999999998865431000       000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ............+.+.+|+|+++..++.+..  -.|+.+++.|
T Consensus       206 ~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  248 (271)
T 3tzq_B          206 VDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADS  248 (271)
T ss_dssp             HHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECC
Confidence            0001111111236789999999999998653  2578899986

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.66  E-value=7.4e-08  Score=77.50  Aligned_cols=150  Identities=12%  Similarity=0.135  Sum_probs=96.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.+..++++++    ++.+ .
T Consensus        72 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~  150 (267)
T 1vl8_A           72 ETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-N  150 (267)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-S
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            46778999999998888776       7899999998521                   23344444544    4556 7


Q ss_pred             cEEEc-CCCC-CCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           56 KRFFP-TEYG-SNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~-~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      .++|. |+.. ....    .++...|..+|+.++.+.+.       .|+.+++|+||++...+...... .    ....-
T Consensus       151 g~iv~isS~~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~----~~~~~  221 (267)
T 1vl8_A          151 PSIINIGSLTVEEVT----MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-D----PEKLD  221 (267)
T ss_dssp             CEEEEECCGGGTCCC----SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-C----HHHHH
T ss_pred             cEEEEECCcchhccC----CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc-C----hHHHH
Confidence            89998 7654 3221    12345677799999887754       48999999999988765322110 0    00000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+... .....+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       222 ~~~~~-~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  262 (267)
T 1vl8_A          222 YMLKR-IPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG  262 (267)
T ss_dssp             HHHHT-CTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhh-CCCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECC
Confidence            00000 001136799999999999987652  2478888875

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.66  E-value=2.5e-08  Score=80.67  Aligned_cols=156  Identities=15%  Similarity=0.133  Sum_probs=98.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH------HhC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK------EVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~------~~g   53 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.+..++++++.      +.+
T Consensus        72 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~  151 (277)
T 2rhc_B           72 EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG  151 (277)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC
Confidence            47789999999998888776       6899999997421                   334455566644      346


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-C-CCCCCC-
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-P-GATAPP-  122 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~-~~~~~~-  122 (258)
                       ..++|. |+......    .++...|..+|+.++.+.+.       .++.+++|+||++.+++...... . ...... 
T Consensus       152 -~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~  226 (277)
T 2rhc_B          152 -TGRIVNIASTGGKQG----VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVST  226 (277)
T ss_dssp             -EEEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCH
T ss_pred             -CeEEEEECccccccC----CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccch
Confidence             789998 76543322    12345677799999877654       47999999999998765321100 0 000000 


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...............+++++|+|++++.++.++.  ..|+.+++.|
T Consensus       227 ~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdG  272 (277)
T 2rhc_B          227 EEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCG  272 (277)
T ss_dssp             HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence            0000000000011237899999999999987652  3578888876

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=98.65  E-value=1.7e-07  Score=75.56  Aligned_cols=151  Identities=13%  Similarity=0.085  Sum_probs=91.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHh------
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEV------   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~------   52 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                    +.+..++++++...      
T Consensus        77 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  156 (272)
T 4e3z_A           77 EAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYS  156 (272)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGT
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcc
Confidence            47889999999998888776       6899999997421                    33445566665443      


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      ++..++|. |+........   .....|..+|+.++.+.+.       .++.++.|+||++...+........       
T Consensus       157 ~~~g~iv~isS~~~~~~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-------  226 (272)
T 4e3z_A          157 GQGGAIVNVSSMAAILGSA---TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPD-------  226 (272)
T ss_dssp             CCCEEEEEECCTHHHHCCT---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------
T ss_pred             CCCCEEEEEcchHhccCCC---CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChH-------
Confidence            11457887 6643322111   1234577799999876643       4899999999999886543211100       


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .............+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       227 ~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          227 RAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             -------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence            00000011111235679999999999987653  2478888875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.64  E-value=4.1e-07  Score=72.66  Aligned_cols=155  Identities=13%  Similarity=0.027  Sum_probs=96.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH-----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI-----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa-----~~~g~   54 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++     ++.+ 
T Consensus        56 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-  134 (257)
T 3imf_A           56 QILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-  134 (257)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-
Confidence            47889999999998888776       7899999998421                   33445555555     3333 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH--------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE--------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~--------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      ..++|. |+.......    +....|..+|+.++.+.+        ..|+.+..|+||.+...........   ......
T Consensus       135 ~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~---~~~~~~  207 (257)
T 3imf_A          135 KGNIINMVATYAWDAG----PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI---SEEMAK  207 (257)
T ss_dssp             CCEEEEECCGGGGSCC----TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC----------CCSH
T ss_pred             CcEEEEECchhhccCC----CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc---CHHHHH
Confidence            568887 665433221    234456679998876654        2489999999999887543211000   000000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY  171 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~  171 (258)
                       .+. .......+.+.+|+|++++.++.++.  -.|+.+++.| +..+
T Consensus       208 -~~~-~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG-G~~~  252 (257)
T 3imf_A          208 -RTI-QSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDG-GQHL  252 (257)
T ss_dssp             -HHH-TTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TTTS
T ss_pred             -HHH-hcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC-Cccc
Confidence             000 00111236789999999999998653  2578888886 5343

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=98.63  E-value=5e-08  Score=78.96  Aligned_cols=140  Identities=17%  Similarity=0.153  Sum_probs=91.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                   +.+    .+.++.++++.+ +
T Consensus        84 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~  162 (279)
T 1xg5_A           84 TLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-V  162 (279)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C
T ss_pred             eEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            36788999999999888776       7999999997421                   122    677888888887 6


Q ss_pred             --cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---------hCCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           56 --KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        56 --k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                        .++|. |+......  .+.++...|..+|+.++.+.+         ..++.+++|+||++...+......       .
T Consensus       163 ~~g~iv~isS~~~~~~--~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-------~  233 (279)
T 1xg5_A          163 DDGHIININSMSGHRV--LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD-------K  233 (279)
T ss_dssp             CSCEEEEECCGGGTSC--CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT-------T
T ss_pred             CCceEEEEcChhhccc--CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcc-------c
Confidence              78888 66543311  111233456679999876654         357999999999988765311100       0


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      ....... ......+++++|+|++++.++.++.
T Consensus       234 ~~~~~~~-~~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          234 DPEKAAA-TYEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             CHHHHHH-HHC---CBCHHHHHHHHHHHHHSCT
T ss_pred             ChhHHhh-hcccccCCCHHHHHHHHHHHhcCCc
Confidence            0000000 0112347899999999999998764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=98.63  E-value=1.1e-07  Score=76.79  Aligned_cols=149  Identities=9%  Similarity=0.043  Sum_probs=99.0

Q ss_pred             ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCcc--------c-------------hhc----hHHHHHHHHHhC
Q 025054            6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRT--------E-------------VED----QFKLIAAIKEVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~--------~-------------~~~----~~~li~aa~~~g   53 (258)
                      .+.++.+|++|.+++.++++.       +|+|||+++..        .             +.+    .++++.++++.+
T Consensus        84 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~  163 (279)
T 3ctm_A           84 HSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG  163 (279)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             cceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            478899999999998888764       89999998732        1             111    567888888888


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       .+++|. |+.......  ..++...|..+|+.++.+.+.       .+ .+++|+||++...+.....       ....
T Consensus       164 -~~~iv~isS~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~-------~~~~  232 (279)
T 3ctm_A          164 -KGSLIITSSISGKIVN--IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS-------KDMK  232 (279)
T ss_dssp             -CCEEEEECCCTTSCC-----CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC-------HHHH
T ss_pred             -CCeEEEECchHhccCC--CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC-------hHHH
Confidence             899998 665443221  012344577799999988764       36 8999999998876542110       0000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..+.. ......+++.+|+|++++.++.++.  ..|+.+++.|
T Consensus       233 ~~~~~-~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdg  274 (279)
T 3ctm_A          233 AKWWQ-LTPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDG  274 (279)
T ss_dssp             HHHHH-HSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHH-hCCccCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            00000 0001137899999999999998652  3578888876

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=98.63  E-value=1.9e-07  Score=75.17  Aligned_cols=148  Identities=9%  Similarity=0.052  Sum_probs=94.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +.+.    +.++...++.+ .
T Consensus        80 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~  158 (271)
T 4iin_A           80 KAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-F  158 (271)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-C
Confidence            57889999999998888776       7899999998531                   2223    33444445566 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .++...|..+|+.++.+.+.       .++.++.|+||++...+...+...        ...
T Consensus       159 g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--------~~~  226 (271)
T 4iin_A          159 GSVVNVASIIGERG----NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE--------LKA  226 (271)
T ss_dssp             EEEEEECCHHHHHC----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------------
T ss_pred             CEEEEEechhhcCC----CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH--------HHH
Confidence            78887 66433211    12345677799999877653       589999999999877654332110        000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+.+|+|+++..++.++.  -.|+.+++.|
T Consensus       227 ~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdG  267 (271)
T 4iin_A          227 DYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNG  267 (271)
T ss_dssp             -CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCC
Confidence            01111111247789999999999998653  3588888876

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=98.63  E-value=1.2e-07  Score=75.70  Aligned_cols=155  Identities=13%  Similarity=0.140  Sum_probs=94.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+.    +.++...++.+..
T Consensus        52 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~  131 (256)
T 1geg_A           52 HAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG  131 (256)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence            47789999999999988876       7999999997421                   2222    3334444444313


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC----C-CCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA----Q-PGATAPP  122 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~----~-~~~~~~~  122 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .++.+++|+||++.+.+.....    . .+..  .
T Consensus       132 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--~  205 (256)
T 1geg_A          132 GKIINACSQAGHVGN----PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKP--L  205 (256)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCC--T
T ss_pred             CEEEEECchhhcCCC----CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCC--h
Confidence            68887 665433221    1234567799998877654       5899999999999876532210    0 0000  0


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...............+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       206 ~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  251 (256)
T 1geg_A          206 GYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG  251 (256)
T ss_dssp             THHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            0000000000001137899999999999987652  3578888875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.62  E-value=3.4e-07  Score=74.10  Aligned_cols=158  Identities=13%  Similarity=0.061  Sum_probs=99.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                    +.+..++++++    ++.+ 
T Consensus        58 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-  136 (280)
T 3tox_A           58 EAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-  136 (280)
T ss_dssp             CEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            47788999999998888776       7899999998421                    23344455544    4445 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.......   .+....|..+|+.++.+.+.       .++.+..|+||.+.......... .   ......
T Consensus       137 ~g~iv~isS~~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~---~~~~~~  209 (280)
T 3tox_A          137 GGSLTFTSSFVGHTAG---FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLP-G---AAPETR  209 (280)
T ss_dssp             CEEEEEECCSBTTTBC---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGST-T---CCTHHH
T ss_pred             CCEEEEEcChhhCcCC---CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhcc-c---cCHHHH
Confidence            568887 665433111   12345677799999877653       58999999999998765432100 0   000001


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYS  172 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t  172 (258)
                      ...........+.+++|+|++++.++.++.  -.|+.+++.| |..++
T Consensus       210 ~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG-G~~~~  256 (280)
T 3tox_A          210 GFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADG-GASVT  256 (280)
T ss_dssp             HHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGC
T ss_pred             HHHhccCccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECC-Ccccc
Confidence            111111111236789999999999998753  3488999987 54444

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=98.62  E-value=2.4e-07  Score=75.75  Aligned_cols=155  Identities=10%  Similarity=0.088  Sum_probs=98.3

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~   54 (258)
                      .++.++.+|++|.+++.++++       ++|+|||+++...                   +.+..++++++..    .+ 
T Consensus        72 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-  150 (303)
T 1yxm_A           72 ARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-  150 (303)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-
T ss_pred             ccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-
Confidence            357889999999999888876       5899999998321                   4456677777654    33 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc-CCCCCCCCCCCCCCc
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL-PTMAQPGATAPPREN  125 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~-~~~~~~~~~~~~~~~  125 (258)
                      ..++|. |+.. ...    .+....|..+|+.++.+.+.       .|+.+++||||++++... ....... .......
T Consensus       151 ~~~iv~isS~~-~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~  224 (303)
T 1yxm_A          151 GGSIVNIIVPT-KAG----FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG-QSFFEGS  224 (303)
T ss_dssp             CEEEEEECCCC-TTC----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG-GGGGTTG
T ss_pred             CCeEEEEEeec-ccC----CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccc-hHHHHHH
Confidence            467887 6654 211    12344566689888766643       489999999999998632 1110000 0000000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY  171 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~  171 (258)
                         ... .....+.+++|+|++++.++.++.  ..|+.+++.| +..+
T Consensus       225 ---~~~-~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~g-G~~~  267 (303)
T 1yxm_A          225 ---FQK-IPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDG-GRSL  267 (303)
T ss_dssp             ---GGG-STTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred             ---Hhc-CcccCCCCHHHHHHHHHHHhCcccccCCCcEEEECC-Ceec
Confidence               000 001137899999999999987643  3578888886 4343

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.61  E-value=8.6e-07  Score=71.85  Aligned_cols=156  Identities=13%  Similarity=0.101  Sum_probs=98.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                    +.+...+++++    ++.+ 
T Consensus        78 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-  156 (283)
T 3v8b_A           78 QAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-  156 (283)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            47788999999998888776       7899999998521                    33445556655    6666 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+.......  +.++...|..+|+.++.+.+.       .|+.+..|+||++...+........... .....
T Consensus       157 ~g~Iv~isS~~~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~  233 (283)
T 3v8b_A          157 GGAIVVVSSINGTRTF--TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEE-TAIPV  233 (283)
T ss_dssp             CEEEEEECCSBTTTBC--CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHH-HSCCC
T ss_pred             CceEEEEcChhhccCC--CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchh-hhhhh
Confidence            788888 665443211  112345677799999877753       5799999999999876543211000000 00000


Q ss_pred             EeccCCCce---eeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPK---AIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~---~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..... ..+   ..+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       234 ~~~~~-~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  277 (283)
T 3v8b_A          234 EWPKG-QVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDG  277 (283)
T ss_dssp             BCTTC-SCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhhhh-cCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECc
Confidence            00110 001   135688999999999988653  2478888875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.61  E-value=8.9e-08  Score=77.46  Aligned_cols=157  Identities=17%  Similarity=0.151  Sum_probs=99.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+..+.+|++|.+++.++++       +.|++||+++...                   +.+..++++++    ++.+ .
T Consensus        74 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~  152 (277)
T 4dqx_A           74 KAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-G  152 (277)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-C
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            47788999999999888776       7899999998531                   23334444444    4455 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCC-CCCCCCCCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPT-MAQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~-~~~~~~~~~~~~~~  126 (258)
                      .++|. |+......    .++...|..+|+.++.+.+.       .|+.+..|+||++...+... .....   ......
T Consensus       153 g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~  225 (277)
T 4dqx_A          153 GSIINTTSYTATSA----IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAK---DPAKLR  225 (277)
T ss_dssp             EEEEEECCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCS---CHHHHH
T ss_pred             cEEEEECchhhCcC----CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhccccc---chhHHH
Confidence            78887 66544322    12345677799999877653       48999999999998754211 10000   000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY  171 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~  171 (258)
                      ...........+.+++|+|++++.++.+..  -.|+.+++.| +..+
T Consensus       226 ~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG-G~~~  271 (277)
T 4dqx_A          226 SDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDG-GSSI  271 (277)
T ss_dssp             HHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS-SSSS
T ss_pred             HHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECC-chhh
Confidence            001111112236789999999999988653  3588899986 5343

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=98.61  E-value=2e-07  Score=74.43  Aligned_cols=156  Identities=15%  Similarity=0.139  Sum_probs=96.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++    ++.+ .
T Consensus        54 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~  132 (258)
T 3a28_C           54 KAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-V  132 (258)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-C
Confidence            47889999999999888776       7999999997421                   22333444444    4456 6


Q ss_pred             -cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-CCC-CCCCC-C
Q 025054           56 -KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-QPG-ATAPP-R  123 (258)
Q Consensus        56 -k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-~~~-~~~~~-~  123 (258)
                       .++|. |+......    .++...|..+|+.++.+.+.       .++.+++|+||++...+..... ... ..... .
T Consensus       133 ~g~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  208 (258)
T 3a28_C          133 KGKIINAASIAAIQG----FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIG  208 (258)
T ss_dssp             CCEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTT
T ss_pred             CcEEEEECcchhccC----CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchH
Confidence             78998 76544322    12345677799999876653       5899999999999876432100 000 00000 0


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .....+........+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       209 ~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  253 (258)
T 3a28_C          209 ENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDG  253 (258)
T ss_dssp             HHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence            000000000001126799999999999987652  3578888876

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.61  E-value=1.7e-07  Score=74.53  Aligned_cols=147  Identities=16%  Similarity=0.192  Sum_probs=93.9

Q ss_pred             eeEEeccCC-CHHHHHHhhCCCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccEEEc-C
Q 025054            7 CLIAQGDLH-DHESLVKAIKPVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKRFFP-T   61 (258)
Q Consensus         7 v~~~~~D~~-d~~~l~~al~g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~~v~-S   61 (258)
                      +.++ +|+. +.+.+.+.+.++|+|||+++...                       +...+.++.++++.+ ..++|. |
T Consensus        62 ~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~is  139 (249)
T 1o5i_A           62 RYVV-CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAIT  139 (249)
T ss_dssp             EEEE-CCTTTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred             eEEE-eeHHHHHHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEc
Confidence            4555 8883 45566666668999999997421                       122456677777888 889998 7


Q ss_pred             CCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCc
Q 025054           62 EYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQP  134 (258)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  134 (258)
                      +.......    ++...|..+|+.++.+.+.       .|+.+++|+||++.+.+...... .   . .. ..+. ....
T Consensus       140 S~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~---~-~~-~~~~-~~~p  208 (249)
T 1o5i_A          140 SFSVISPI----ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS-E---E-KK-KQVE-SQIP  208 (249)
T ss_dssp             CGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC-H---H-HH-HHHH-TTST
T ss_pred             chHhcCCC----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch-h---h-HH-HHHH-hcCC
Confidence            65443221    2344566799998876643       58999999999998876432110 0   0 00 0000 0001


Q ss_pred             eeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          135 KAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       135 ~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...+.+++|+|++++.++.++.  ..|+.+++.|
T Consensus       209 ~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdg  242 (249)
T 1o5i_A          209 MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDG  242 (249)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            1237799999999999987653  2478888876

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.61  E-value=5e-08  Score=77.44  Aligned_cols=153  Identities=16%  Similarity=0.148  Sum_probs=96.3

Q ss_pred             ceeEEeccCCCHHHHHHhh---CCCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAI---KPVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al---~g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~~v   59 (258)
                      ++.++.+|++|++++.+++   .+.|+|||+++...                   +.+..++++++    ++.+ ..++|
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv  129 (246)
T 2ag5_A           51 GIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNII  129 (246)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEE
T ss_pred             CceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEE
Confidence            5788999999999888664   57899999998421                   23334445544    4566 78999


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCC-CCCCCCCCCCCCce-Eec
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPT-MAQPGATAPPRENI-LFY  129 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~  129 (258)
                      . |+........   .+...|..+|+.++.+.+.       .++.+++||||++++++... +....   ...... .+.
T Consensus       130 ~isS~~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~  203 (246)
T 2ag5_A          130 NMSSVASSVKGV---VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG---NPEEARNDFL  203 (246)
T ss_dssp             EECCSBTTTBCC---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSS---SHHHHHHHHH
T ss_pred             EEechHhCcCCC---CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhccc---CcHHHHHHHH
Confidence            8 6654432211   0234577799999887754       48999999999998865321 10000   000000 000


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .. .....+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       204 ~~-~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdg  241 (246)
T 2ag5_A          204 KR-QKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (246)
T ss_dssp             HT-CTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             hc-CCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            00 000136789999999999987653  2478888875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=98.61  E-value=1.2e-07  Score=75.72  Aligned_cols=147  Identities=16%  Similarity=0.174  Sum_probs=92.0

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~vk   56 (258)
                      +.++.+|++|++++.++++       +.|+|||+++...                   +.+..+++++    +++.+ ..
T Consensus        61 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g  139 (253)
T 2nm0_A           61 FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KG  139 (253)
T ss_dssp             SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CE
T ss_pred             ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence            5678899999998888775       4699999987521                   2333444444    44456 78


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.       .++.+++|+||++...+...+..      .. ...+
T Consensus       140 ~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~------~~-~~~~  208 (253)
T 2nm0_A          140 RVVLISSVVGLLGS----AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD------EQ-RANI  208 (253)
T ss_dssp             EEEEECCCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------------C-HHHH
T ss_pred             EEEEECchhhCCCC----CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH------HH-HHHH
Confidence            9998 765443211    1234566799998877653       58999999999887665332110      00 0000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      . .......+++.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       209 ~-~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdG  247 (253)
T 2nm0_A          209 V-SQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDG  247 (253)
T ss_dssp             H-TTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             H-hcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECC
Confidence            0 00011237899999999999998753  3578888876

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.61  E-value=1.1e-07  Score=77.96  Aligned_cols=146  Identities=14%  Similarity=0.059  Sum_probs=87.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+..++++++    ++.++.
T Consensus        81 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~  160 (301)
T 3tjr_A           81 DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTG  160 (301)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC
Confidence            57889999999999888876       7899999998531                   33445555554    343323


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC--CCCCCCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA--TAPPREN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~--~~~~~~~  125 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.++.|+||++...+.........  .......
T Consensus       161 g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  236 (301)
T 3tjr_A          161 GHIAFTASFAGLVPN----AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATP  236 (301)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------
T ss_pred             cEEEEeCchhhcCCC----CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccCh
Confidence            57887 665443221    2345667799988876643       58999999999998765421100000  0000001


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ....+.......+++++|+|++++.++..+
T Consensus       237 ~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          237 EGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             ------------CCCHHHHHHHHHHHHHHT
T ss_pred             hhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence            111222233446899999999999999765

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.60  E-value=2.2e-07  Score=74.98  Aligned_cols=152  Identities=13%  Similarity=0.111  Sum_probs=94.2

Q ss_pred             ceeEEeccCCCHHHHHHhh--------CCCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAI--------KPVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al--------~g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~   54 (258)
                      ++.++.+|++|++++.+++        .+.|++||+++...                   +.+..++++++    ++.+ 
T Consensus        71 ~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-  149 (273)
T 1ae1_A           71 NVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-  149 (273)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            4788999999999888877        57899999997521                   33444555555    4566 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc-
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN-  125 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~-  125 (258)
                      ..++|. |+......    .++...|..+|+.++.+.+.       .++.+++|+||++.+++........   ..... 
T Consensus       150 ~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~  222 (273)
T 1ae1_A          150 NGNVIFLSSIAGFSA----LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN---PHQKEE  222 (273)
T ss_dssp             SEEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHH
T ss_pred             CcEEEEEcCHhhcCC----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcc---cCcHHH
Confidence            789998 66544322    12345677799999877653       4899999999999887643211000   00000 


Q ss_pred             e-EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 I-LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~-~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      . .+... .....+.+++|+|++++.++.++.  ..|+.+.+.|
T Consensus       223 ~~~~~~~-~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  265 (273)
T 1ae1_A          223 IDNFIVK-TPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADG  265 (273)
T ss_dssp             HHHHHHH-STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhc-CCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECC
Confidence            0 00000 000126789999999999987642  2578888876

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=98.60  E-value=8.5e-08  Score=77.41  Aligned_cols=150  Identities=15%  Similarity=0.117  Sum_probs=97.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk   56 (258)
                      .+.++.+|++|.+++.++.+      +.|++||+++...                   +.+..++++++    ++.+ ..
T Consensus        80 ~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g  158 (273)
T 3uf0_A           80 SAEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SG  158 (273)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CC
Confidence            47889999999988776654      7899999998531                   33444555544    5566 67


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    ++...|..+|+.++.+.+.       .|+.+..|+||++...........     . .....
T Consensus       159 ~IV~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~-~~~~~  228 (273)
T 3uf0_A          159 RIVTIASMLSFQGG----RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD-----D-ERAAE  228 (273)
T ss_dssp             EEEEECCGGGTSCC----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS-----H-HHHHH
T ss_pred             EEEEEcchHhcCCC----CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC-----H-HHHHH
Confidence            8887 665443221    2345677799999877653       589999999999987654321100     0 00000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .........+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       229 ~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdG  268 (273)
T 3uf0_A          229 ITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDG  268 (273)
T ss_dssp             HHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence            0000011236789999999999988652  3588899886

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.60  E-value=1e-07  Score=75.85  Aligned_cols=148  Identities=16%  Similarity=0.099  Sum_probs=96.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||+++...                   +.+..++++++    ++.+ .
T Consensus        56 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~  134 (248)
T 3op4_A           56 NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-Q  134 (248)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            46788999999999888876       7899999998531                   33444555554    4466 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .++...|..+|+.++.+.+.       .|+.+..|+||.+...+......        ....
T Consensus       135 g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--------~~~~  202 (248)
T 3op4_A          135 GRIINVGSVVGTMG----NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND--------EQRT  202 (248)
T ss_dssp             EEEEEECCHHHHHC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH--------HHHH
T ss_pred             CEEEEEcchhhcCC----CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH--------HHHH
Confidence            78887 66432211    12345677799988876653       58999999999887755332100        0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       203 ~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdg  243 (248)
T 3op4_A          203 ATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNG  243 (248)
T ss_dssp             HHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECC
Confidence            00011111236799999999999987653  2488888876

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.60  E-value=5.3e-08  Score=77.94  Aligned_cols=150  Identities=11%  Similarity=0.059  Sum_probs=97.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.+..++++++    ++.+ .
T Consensus        55 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~  133 (258)
T 3oid_A           55 KVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-G  133 (258)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-C
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            47889999999998888775       5699999997421                   33444555555    5556 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .++...|..+|+.++.+.+.       .++.+..|+||++...+......      ......
T Consensus       134 g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~------~~~~~~  203 (258)
T 3oid_A          134 GHIVSISSLGSIRY----LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN------REDLLE  203 (258)
T ss_dssp             EEEEEEEEGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT------HHHHHH
T ss_pred             cEEEEECchhhCCC----CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc------CHHHHH
Confidence            78887 66543322    12345677799999887754       47999999999988765433210      000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+++|+|+++..+++++.  -.|+.+++.|
T Consensus       204 ~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdG  244 (258)
T 3oid_A          204 DARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDG  244 (258)
T ss_dssp             HHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEEST
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence            00000111236789999999999998753  3488898876

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.60  E-value=8.4e-08  Score=76.54  Aligned_cols=148  Identities=14%  Similarity=0.154  Sum_probs=96.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +.+    .+.++...++.+ .
T Consensus        64 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~  142 (256)
T 3ezl_A           64 DFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-W  142 (256)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             eeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            47788999999998888776       6899999998531                   233    344455556677 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .++.++.++||++...+......        ....
T Consensus       143 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~  210 (256)
T 3ezl_A          143 GRIINISSVNGQKGQ----FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP--------DVLE  210 (256)
T ss_dssp             EEEEEECCCCGGGSC----SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH--------HHHH
T ss_pred             CEEEEEcchhhccCC----CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCH--------HHHH
Confidence            88998 765443221    2345677799988876643       58999999999988765432110        0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       211 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          211 KIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNG  251 (256)
T ss_dssp             HHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            00000011236689999999999987642  3578888876

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=98.60  E-value=4.6e-07  Score=73.33  Aligned_cols=150  Identities=11%  Similarity=0.072  Sum_probs=88.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc--c-------------------hhchHHHHHHH----HHhC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT--E-------------------VEDQFKLIAAI----KEVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~--~-------------------~~~~~~li~aa----~~~g   53 (258)
                      .+.++.+|++|++++.++++       +.|++||+++..  .                   +.+..++++++    ++.+
T Consensus        80 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~  159 (280)
T 4da9_A           80 RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASD  159 (280)
T ss_dssp             CEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhC
Confidence            47889999999998888776       789999999861  0                   23344444444    3332


Q ss_pred             C--ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           54 N--IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        54 ~--vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                      .  ..++|. |+.......    +....|..+|+.++.+.+.       .++.+..|+||++...+.......    .. 
T Consensus       160 ~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~-  230 (280)
T 4da9_A          160 ARASRSIINITSVSAVMTS----PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK----YD-  230 (280)
T ss_dssp             CCCCEEEEEECCC-----------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------
T ss_pred             CCCCCEEEEEcchhhccCC----CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh----HH-
Confidence            0  247887 665443221    2345677799999877653       579999999999987654332110    00 


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..  +.........+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       231 ~~--~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  273 (280)
T 4da9_A          231 GL--IESGLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADG  273 (280)
T ss_dssp             -------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEEST
T ss_pred             HH--HhhcCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            00  00000111236789999999999998763  3588899976

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.59  E-value=1.4e-07  Score=74.86  Aligned_cols=147  Identities=14%  Similarity=0.064  Sum_probs=95.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      |+.++.+|++|++++.++++       +.|+|||+++...                   +.+..++++++.    +.+ .
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~  128 (245)
T 1uls_A           50 GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-P  128 (245)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-C
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            57889999999999888776       4899999998421                   233445555543    346 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.. ....    +....|..+|+.++.+.+.       .|+.+++|+||++...+...+.. .   . ...+.
T Consensus       129 g~iv~isS~~-~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~---~-~~~~~  198 (245)
T 1uls_A          129 GSIVLTASRV-YLGN----LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE-K---V-REKAI  198 (245)
T ss_dssp             EEEEEECCGG-GGCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH-H---H-HHHHH
T ss_pred             CEEEEEccch-hcCC----CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCH-H---H-HHHHH
Confidence            88998 7655 2211    2245677799998766643       58999999999987765332100 0   0 00000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       ...+.  ..+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       199 -~~~p~--~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg  236 (245)
T 1uls_A          199 -AATPL--GRAGKPLEVAYAALFLLSDESSFITGQVLFVDG  236 (245)
T ss_dssp             -HTCTT--CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -hhCCC--CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECC
Confidence             00000  126799999999999988652  3578888876

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.59  E-value=1.3e-07  Score=76.44  Aligned_cols=150  Identities=12%  Similarity=0.135  Sum_probs=95.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v   55 (258)
                      ++.++.+|++|++++.++++       ++|+|||+++...                   +.+.    +.++..+++.+ .
T Consensus        78 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~  156 (276)
T 2b4q_A           78 DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-S  156 (276)
T ss_dssp             CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-C
T ss_pred             ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-C
Confidence            57788999999998888775       7899999997421                   2233    34444445555 4


Q ss_pred             ----cEEEc-CCCCCCCCCCCCCCCCc-cchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC
Q 025054           56 ----KRFFP-TEYGSNVDAGHPIEPAK-SGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP  122 (258)
Q Consensus        56 ----k~~v~-S~~~~~~~~~~~~~~~~-~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~  122 (258)
                          .++|. |+.......    +... .|..+|+.++.+.+.       .++.+++|+||++...+.......    ..
T Consensus       157 ~~~~g~iV~isS~~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~  228 (276)
T 2b4q_A          157 AENPARVINIGSVAGISAM----GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND----PQ  228 (276)
T ss_dssp             SSSCEEEEEECCGGGTCCC----CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC----HH
T ss_pred             CCCCCEEEEECCHHHcCCC----CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh----HH
Confidence                78998 665433221    1233 677799999877653       489999999999987654221000    00


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       ..+.-... .....+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       229 -~~~~~~~~-~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  272 (276)
T 2b4q_A          229 -ALEADSAS-IPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDG  272 (276)
T ss_dssp             -HHHHHHHT-STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -HHHHhhcC-CCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence             00000000 001136799999999999997652  3578888875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=98.59  E-value=2.1e-07  Score=75.14  Aligned_cols=160  Identities=16%  Similarity=0.123  Sum_probs=98.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------hhchHHHHHHH----HHhCCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------VEDQFKLIAAI----KEVGNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------~~~~~~li~aa----~~~g~vk~~v   59 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...               +.+..++++++    ++.++-.++|
T Consensus        75 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv  154 (278)
T 3sx2_A           75 RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIV  154 (278)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEE
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            47888999999999988876       7899999998532               34445555554    3333135788


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC---CCCCCCceEe
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA---TAPPRENILF  128 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~---~~~~~~~~~~  128 (258)
                      . |+...........++...|..+|+.++.+.+.       .++.+..|+||++...+.........   ..........
T Consensus       155 ~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
T 3sx2_A          155 LISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGA  234 (278)
T ss_dssp             EECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CT
T ss_pred             EEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhh
Confidence            7 66443222111111234566799999877653       57999999999998765431000000   0000000011


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+.... ..+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       235 ~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  273 (278)
T 3sx2_A          235 MGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDA  273 (278)
T ss_dssp             TSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECC
Confidence            122112 457899999999999987653  3478888876

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=98.59  E-value=6e-08  Score=77.92  Aligned_cols=155  Identities=10%  Similarity=0.068  Sum_probs=96.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      ++.++.+|++|++++.++++       ++|+|||+++...                   +.+..++++++.    +.+ .
T Consensus        47 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~  125 (264)
T 2dtx_A           47 KYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-D  125 (264)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-S
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            47788999999999888776       7999999998421                   333344455543    455 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCC----C
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR----E  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~----~  124 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.      ..+.+++|+||++...+........ .....    .
T Consensus       126 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~  200 (264)
T 2dtx_A          126 PSIVNISSVQASIIT----KNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELE-VGSDPMRIEK  200 (264)
T ss_dssp             CEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHH-HCSCHHHHHH
T ss_pred             cEEEEECCchhccCC----CCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcc-cccCchhhHH
Confidence            78998 765443221    2345677799999877754      1289999999999875432210000 00000    0


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .............+++++|+|++++.++.++.  ..|+.+.+.|
T Consensus       201 ~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  244 (264)
T 2dtx_A          201 KISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDG  244 (264)
T ss_dssp             HHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence            00000000011237899999999999987652  3578888876

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=98.58  E-value=2e-07  Score=76.05  Aligned_cols=149  Identities=17%  Similarity=0.106  Sum_probs=97.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++    ++.+ .
T Consensus        92 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~  170 (293)
T 3rih_A           92 NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-R  170 (293)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-S
T ss_pred             cEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            57889999999988877665       6799999998531                   34455666665    5666 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......   .+....|..+|+.++.+.+.       .|+.+..|+||++.+........ .       ...
T Consensus       171 g~iV~isS~~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-~-------~~~  239 (293)
T 3rih_A          171 GRVILTSSITGPVTG---YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGE-E-------YIS  239 (293)
T ss_dssp             CEEEEECCSBTTTBB---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCH-H-------HHH
T ss_pred             CEEEEEeChhhccCC---CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccH-H-------HHH
Confidence            88988 665432111   12345677799999877653       58999999999998864322100 0       000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .........-+...+|+|++++.++.+..  -.|+.+++.|
T Consensus       240 ~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  280 (293)
T 3rih_A          240 GMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDG  280 (293)
T ss_dssp             HHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            00000001125578999999999987653  3488898876

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.58  E-value=1.4e-07  Score=74.90  Aligned_cols=144  Identities=11%  Similarity=0.096  Sum_probs=91.6

Q ss_pred             EeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccEEE
Q 025054           10 AQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKRFF   59 (258)
Q Consensus        10 ~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~~v   59 (258)
                      +.+|++|++++.++++       +.|++||+++...                   +.+..++++++    ++.+ ..++|
T Consensus        58 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv  136 (247)
T 1uzm_A           58 VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMI  136 (247)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEE
T ss_pred             eeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEE
Confidence            6789999998888775       5799999998521                   23334445544    4566 78999


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD  131 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  131 (258)
                      . |+.......    ++...|..+|+.++.+.+.       .++.+++|+||++...+...+.. .   . ...  +.. 
T Consensus       137 ~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~---~-~~~--~~~-  204 (247)
T 1uzm_A          137 FIGSVSGLWGI----GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE-R---I-QQG--ALQ-  204 (247)
T ss_dssp             EECCCCC---------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH-H---H-HHH--HGG-
T ss_pred             EECCHhhccCC----CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCH-H---H-HHH--HHh-
Confidence            8 765443221    2345677799988877653       58999999999998765322100 0   0 000  000 


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ......+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       205 ~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdg  241 (247)
T 1uzm_A          205 FIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDG  241 (247)
T ss_dssp             GCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECC
Confidence            0001136799999999999987642  3578888876

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=98.58  E-value=4.4e-08  Score=79.01  Aligned_cols=150  Identities=12%  Similarity=0.155  Sum_probs=97.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.+..+++++    .++.+ .
T Consensus        76 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~  154 (271)
T 4ibo_A           76 DAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-Y  154 (271)
T ss_dssp             CEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            47788999999999888876       7899999998531                   2333444444    44456 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .++...|..+|+.++.+.+.       .|+.+..|+||++...+.......     . ....
T Consensus       155 g~iV~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~-~~~~  224 (271)
T 4ibo_A          155 GKIVNIGSLTSELA----RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN-----P-EFDA  224 (271)
T ss_dssp             EEEEEECCGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC-----H-HHHH
T ss_pred             cEEEEEccHHhCCC----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC-----H-HHHH
Confidence            78887 76544322    12345677799999877653       589999999999987654321000     0 0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       225 ~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG  265 (271)
T 4ibo_A          225 WVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDG  265 (271)
T ss_dssp             HHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECC
Confidence            00000111236789999999999987653  3478899886

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=98.57  E-value=8.6e-08  Score=77.07  Aligned_cols=141  Identities=15%  Similarity=0.149  Sum_probs=92.0

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHH----HHHHHHHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFK----LIAAIKEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~----li~aa~~~g~   54 (258)
                      .++.++.+|++|.+++.++++       ++|++||+++...                   +.+..+    ++..+++.+ 
T Consensus        59 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-  137 (266)
T 3p19_A           59 PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-  137 (266)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            467889999999998888776       7899999998531                   233334    444455677 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+......    .+....|..+|+.++.+.+.       .|+.++.|+||++...+........   . ....
T Consensus       138 ~g~IV~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~-~~~~  209 (266)
T 3p19_A          138 CGTIINISSIAGKKT----FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQ---I-KDGY  209 (266)
T ss_dssp             CCEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHH---H-HHHH
T ss_pred             CcEEEEEcChhhCCC----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchh---h-hHHH
Confidence            789998 76544322    12345677799999876643       5899999999999876643321000   0 0000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      .-..  .....+.+++|+|++++.++++++
T Consensus       210 ~~~~--~~~~r~~~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          210 DAWR--VDMGGVLAADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             HHHH--HHTTCCBCHHHHHHHHHHHHHSCT
T ss_pred             Hhhc--ccccCCCCHHHHHHHHHHHHcCCC
Confidence            0000  001136889999999999998874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.57  E-value=6.7e-08  Score=79.01  Aligned_cols=173  Identities=13%  Similarity=0.091  Sum_probs=105.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHH----hC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKE----VG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~----~g   53 (258)
                      .+.++.+|++|++++.++++       ++|+|||+++...                     +.+..++++++..    .+
T Consensus        79 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~  158 (297)
T 1xhl_A           79 KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK  158 (297)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence            57889999999999888776       7899999997421                     2233455555543    33


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC-CC
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP-RE  124 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~-~~  124 (258)
                        .++|. |+.......   .++...|..+|+.++.+.+.       .|+.+++|+||++...+............. ..
T Consensus       159 --g~IV~isS~~~~~~~---~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  233 (297)
T 1xhl_A          159 --GEIVNVSSIVAGPQA---HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYS  233 (297)
T ss_dssp             --CEEEEECCGGGSSSC---CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHH
T ss_pred             --CEEEEEcCchhccCC---CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHH
Confidence              58887 665433221   01244566799999877653       589999999999987653321000000000 00


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCC-C--CCCceEEEcCCCCccCHHHHHHHHHHHh
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R--TLNKTLYLRPPKNIYSFKELVALWEKKI  184 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~  184 (258)
                      .............+.+++|+|++++.++.++ .  ..|+.+.+.| +..+.+.++++.+.+++
T Consensus       234 ~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdG-G~~~~~~~~~~~~~~~~  295 (297)
T 1xhl_A          234 FIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADG-GSTLVMGMQTHDLMSVL  295 (297)
T ss_dssp             HHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST-TGGGCCGGGGSCHHHHT
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECC-Cccccccccccchhhhh
Confidence            0000000000113679999999999998754 2  3588899987 55677777666665543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.57  E-value=1.2e-07  Score=74.81  Aligned_cols=151  Identities=14%  Similarity=0.100  Sum_probs=93.1

Q ss_pred             ceeEEeccCCCHHHHHHhh-------CCCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAI-------KPVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v   55 (258)
                      |+..+.+|++| +++.+++       .+.|++||+++...                   +.+.    +.++..+++.+ .
T Consensus        44 ~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~  121 (239)
T 2ekp_A           44 GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-W  121 (239)
T ss_dssp             TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            46778899988 6655544       47999999997421                   2233    33444445677 8


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+........  .++...|..+|+.++.+.+.       .|+++++|+||++..++.......     ....-.
T Consensus       122 g~iv~isS~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~  194 (239)
T 2ekp_A          122 GRVLFIGSVTTFTAGG--PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN-----PELYEP  194 (239)
T ss_dssp             EEEEEECCGGGTSCCT--TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-----HHHHHH
T ss_pred             cEEEEECchhhccCCC--CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC-----HHHHHH
Confidence            89998 6654332210  12345677799999876653       489999999999988754321100     000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +.. ......+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       195 ~~~-~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  234 (239)
T 2ekp_A          195 ITA-RIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDG  234 (239)
T ss_dssp             HHT-TCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHh-cCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECC
Confidence            000 0001136799999999999987642  2577888875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=98.56  E-value=1.4e-07  Score=75.81  Aligned_cols=154  Identities=18%  Similarity=0.126  Sum_probs=96.4

Q ss_pred             EeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccEEE
Q 025054           10 AQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKRFF   59 (258)
Q Consensus        10 ~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~~v   59 (258)
                      +.+|++|.+++.++++       +.|++||+++...                   +.+..++++++    ++.+ ..++|
T Consensus        71 ~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv  149 (266)
T 3uxy_A           71 LPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIV  149 (266)
T ss_dssp             CCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEE
T ss_pred             cCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEE
Confidence            3678999887776654       7899999998531                   34455566665    6667 78898


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-CCCCCCCCCCceEecc
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-QPGATAPPRENILFYG  130 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g  130 (258)
                      . |+......    .++...|..+|+.++.+.+.       .|+.++.|+||++...+..... .....  .........
T Consensus       150 ~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~  223 (266)
T 3uxy_A          150 NVASCWGLRP----GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFD--PDRAVAELG  223 (266)
T ss_dssp             EECCSBTTBC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCC--HHHHHHHHH
T ss_pred             EECCHHhCCC----CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhccccc--chHHHHHHH
Confidence            8 66544322    12345677799999877653       4899999999999876432110 00000  000000111


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY  171 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~  171 (258)
                      .......+.+++|+|++++.++.++.  -.|+.+++.| +..+
T Consensus       224 ~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG-G~~~  265 (266)
T 3uxy_A          224 RTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNG-GKAV  265 (266)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TCCC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc-CEeC
Confidence            11112246789999999999998753  2488899886 4343

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=98.54  E-value=6.7e-08  Score=77.43  Aligned_cols=156  Identities=10%  Similarity=0.059  Sum_probs=98.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhC-C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVG-N   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g-~   54 (258)
                      ++.++.+|++|++++.++++       +.|+|||+++...                       +.+..++++++...- +
T Consensus        59 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  138 (261)
T 2wyu_A           59 GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE  138 (261)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE
T ss_pred             CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence            37889999999999888776       6899999997420                       345567777776541 0


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+......    .++...|..+|+.++.+.+.       .++.+++|+||++.+.+.......     . ...
T Consensus       139 ~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~-~~~  208 (261)
T 2wyu_A          139 GGGIVTLTYYASEKV----VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF-----T-KMY  208 (261)
T ss_dssp             EEEEEEEECGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTH-----H-HHH
T ss_pred             CCEEEEEecccccCC----CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcccc-----H-HHH
Confidence            147887 66543322    12344577799999877653       489999999999987653221000     0 000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYS  172 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t  172 (258)
                      ...........+.+++|+|++++.++.++.  ..|+.+++.| +..++
T Consensus       209 ~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg-G~~~~  255 (261)
T 2wyu_A          209 DRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDA-GYHIM  255 (261)
T ss_dssp             HHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGGGB
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECC-Ccccc
Confidence            000000000125789999999999987643  2478898886 43443

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=98.54  E-value=1.1e-07  Score=75.87  Aligned_cols=154  Identities=9%  Similarity=0.087  Sum_probs=96.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhC---
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVG---   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g---   53 (258)
                      .+.++.+|++|.+++.++++      +.|++||+++...                       +.+...+++++...-   
T Consensus        53 ~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~  132 (257)
T 3tl3_A           53 RARFAAADVTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKT  132 (257)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHh
Confidence            57889999999999988876      7899999998421                       334455666655421   


Q ss_pred             --------CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCC
Q 025054           54 --------NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPG  117 (258)
Q Consensus        54 --------~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~  117 (258)
                              .-.++|. |+.......    ++...|..+|+.++.+.+.       .++.+..|+||++...+...+..  
T Consensus       133 ~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--  206 (257)
T 3tl3_A          133 EPVGPNAEERGVIINTASVAAFDGQ----IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPE--  206 (257)
T ss_dssp             CCC--CCCCSEEEEEECCCC--CCH----HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CH--
T ss_pred             cccccccCCCcEEEEEcchhhcCCC----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccH--
Confidence                    1347887 665443221    1234566799988876643       58999999999987765432110  


Q ss_pred             CCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCcc
Q 025054          118 ATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIY  171 (258)
Q Consensus       118 ~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~  171 (258)
                           .....+...-.....+.+.+|+|++++.+++++.-.|+.+++.| +..+
T Consensus       207 -----~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~~~itG~~i~vdG-G~~~  254 (257)
T 3tl3_A          207 -----EARASLGKQVPHPSRLGNPDEYGALAVHIIENPMLNGEVIRLDG-AIRM  254 (257)
T ss_dssp             -----HHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST-TC--
T ss_pred             -----HHHHHHHhcCCCCCCccCHHHHHHHHHHHhcCCCCCCCEEEECC-CccC
Confidence                 00000000000102367899999999999987545688899986 5343

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.54  E-value=8.8e-07  Score=71.39  Aligned_cols=146  Identities=13%  Similarity=0.071  Sum_probs=85.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                    +.+..++++++    ++.+.
T Consensus        75 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~  154 (272)
T 4dyv_A           75 DALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP  154 (272)
T ss_dssp             CCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS
T ss_pred             CeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC
Confidence            57889999999999888876       7999999998521                    23333444444    44320


Q ss_pred             -ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           55 -IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        55 -vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       -.++|. |+.......    ++...|..+|+.++.+.+.       .++.+..|+||.+...+...+...    ... .
T Consensus       155 ~~g~IV~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~-~  225 (272)
T 4dyv_A          155 RGGRIINNGSISATSPR----PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG----VPQ-A  225 (272)
T ss_dssp             CCEEEEEECCSSTTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------
T ss_pred             CCcEEEEECchhhcCCC----CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc----chh-h
Confidence             247887 665443221    2345677799999877653       589999999999887654332110    000 0


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCC-CCceEEE
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRT-LNKTLYL  164 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~-~~~~~~l  164 (258)
                         . .......+.+++|+|++++.+++++.. ....+.+
T Consensus       226 ---~-~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~i  261 (272)
T 4dyv_A          226 ---D-LSIKVEPVMDVAHVASAVVYMASLPLDANVQFMTI  261 (272)
T ss_dssp             --------------CHHHHHHHHHHHHHSCTTSCCCEEEE
T ss_pred             ---h-hcccccCCCCHHHHHHHHHHHhCCCCcCccceEEE
Confidence               0 011123478999999999999998742 3333444

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.53  E-value=5.4e-07  Score=72.89  Aligned_cols=155  Identities=13%  Similarity=0.062  Sum_probs=97.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.+..++++++    ++.++-
T Consensus        78 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~  157 (280)
T 3pgx_A           78 KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNG  157 (280)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence            46788999999999888775       7899999998531                   33444555554    444323


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC---CCCCCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA---QPGATAPPRE  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~---~~~~~~~~~~  124 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||++...+.....   ..........
T Consensus       158 g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  233 (280)
T 3pgx_A          158 GSIVVVSSSAGLKAT----PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVH  233 (280)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGG
T ss_pred             CEEEEEcchhhccCC----CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhh
Confidence            57887 665433221    2345667799999876653       5899999999999886543200   0000000000


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+....  ..+..+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       234 ~~~~~~--~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  275 (280)
T 3pgx_A          234 SFPPMP--VQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDK  275 (280)
T ss_dssp             GSCCBT--TBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEEST
T ss_pred             hhhhcc--cCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            111111  112248899999999999988653  3478888876

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.53  E-value=1.1e-07  Score=76.60  Aligned_cols=148  Identities=18%  Similarity=0.110  Sum_probs=95.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+..+.+|++|.+++.++++       +.|++||+++...                   +.+..++++++    ++.+ -
T Consensus        78 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~  156 (270)
T 3ftp_A           78 EGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-G  156 (270)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            46788999999998888776       7899999998421                   33445555555    3455 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .+....|..+|+.++.+.+.       .|+.++.|+||++...+...+..        ....
T Consensus       157 g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--------~~~~  224 (270)
T 3ftp_A          157 GRIVNITSVVGSAG----NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQ--------EQQT  224 (270)
T ss_dssp             EEEEEECCHHHHHC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCH--------HHHH
T ss_pred             CEEEEECchhhCCC----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCH--------HHHH
Confidence            67887 66433211    12245677799988876653       58999999999988754322100        0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       225 ~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  265 (270)
T 3ftp_A          225 ALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNG  265 (270)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECC
Confidence            00111111236789999999999987542  3588899986

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=98.53  E-value=1.2e-07  Score=75.53  Aligned_cols=150  Identities=13%  Similarity=0.012  Sum_probs=95.9

Q ss_pred             ceeEEeccCCCH-HHHHHhhC-------CCcEEEEccCccc-----------hhchHHHHHHHHHhC------CccEEEc
Q 025054            6 NCLIAQGDLHDH-ESLVKAIK-------PVDVVISAVGRTE-----------VEDQFKLIAAIKEVG------NIKRFFP   60 (258)
Q Consensus         6 gv~~~~~D~~d~-~~l~~al~-------g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g------~vk~~v~   60 (258)
                      ++.++.+|++|+ +++.++++       ++|+|||+++...           +.+..++++++...-      ...++|.
T Consensus        56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~  135 (254)
T 1sby_A           56 NITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIAN  135 (254)
T ss_dssp             EEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEE
T ss_pred             eEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence            578899999998 77777665       7899999998532           455666777765421      0246887


Q ss_pred             -CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054           61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG  132 (258)
Q Consensus        61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  132 (258)
                       |+.......    +....|..+|+.++.+.+.       .++.+++|+||++...+.......  ...........   
T Consensus       136 isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~---  206 (254)
T 1sby_A          136 ICSVTGFNAI----HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW--LDVEPRVAELL---  206 (254)
T ss_dssp             ECCGGGTSCC----TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCG--GGSCTTHHHHH---
T ss_pred             ECchhhccCC----CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchh--hhhhHHHHHHH---
Confidence             665443221    2344677799999877654       589999999999988654321110  00000000011   


Q ss_pred             CceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          133 QPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       133 ~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                       ...++.+++|+|++++.+++.. ..|+.+++.|
T Consensus       207 -~~~~~~~~~dvA~~i~~~~~~~-~~G~~~~v~g  238 (254)
T 1sby_A          207 -LSHPTQTSEQCGQNFVKAIEAN-KNGAIWKLDL  238 (254)
T ss_dssp             -TTSCCEEHHHHHHHHHHHHHHC-CTTCEEEEET
T ss_pred             -hcCCCCCHHHHHHHHHHHHHcC-CCCCEEEEeC
Confidence             1124558999999999988643 3578888875

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=98.52  E-value=1.4e-06  Score=70.28  Aligned_cols=147  Identities=15%  Similarity=0.074  Sum_probs=90.8

Q ss_pred             ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc--------------------hhc----hHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE--------------------VED----QFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~--------------------~~~----~~~li~aa~~~g~   54 (258)
                      ++.++.+|++|.+++.++++.       .|+|||+++...                    +.+    .+.++..+++.+ 
T Consensus        70 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-  148 (272)
T 2nwq_A           70 RVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-  148 (272)
T ss_dssp             CEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            578899999999999988865       499999997421                    122    344555556667 


Q ss_pred             cc-EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           55 IK-RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        55 vk-~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      .. ++|. |+......    .+....|..+|+.++.+.+.       .|+.+++|+||++...+...... .   .....
T Consensus       149 ~g~~IV~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~---~~~~~  220 (272)
T 2nwq_A          149 AGASIVNLGSVAGKWP----YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFG-G---DQARY  220 (272)
T ss_dssp             TTCEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------
T ss_pred             CCcEEEEeCCchhccC----CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccc-c---chHHH
Confidence            67 8887 66544322    12345677799999988754       47999999999998765321100 0   00000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCC-CCceEEEc
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRT-LNKTLYLR  165 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~-~~~~~~l~  165 (258)
                      .....    ...+.+.+|+|++++.++.++.. .++.+.+.
T Consensus       221 ~~~~~----~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~  257 (272)
T 2nwq_A          221 DKTYA----GAHPIQPEDIAETIFWIMNQPAHLNINSLEIM  257 (272)
T ss_dssp             ---------CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEE
T ss_pred             HHhhc----cCCCCCHHHHHHHHHHHhCCCccCccceEEEe
Confidence            00010    11247899999999999987642 35556655

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.52  E-value=2.6e-07  Score=74.69  Aligned_cols=154  Identities=12%  Similarity=0.055  Sum_probs=96.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++    ++.+ .
T Consensus        76 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~  154 (277)
T 3gvc_A           76 GAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-G  154 (277)
T ss_dssp             SCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred             cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            57889999999998887765       7899999998531                   23334444444    4455 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.       .|+.+..|+||++...+..................
T Consensus       155 g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  230 (277)
T 3gvc_A          155 GAIVNLSSLAGQVAV----GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGAR  230 (277)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHH
T ss_pred             cEEEEEcchhhccCC----CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhh
Confidence            78887 665443221    2345677799999877653       58999999999998865322110000000000000


Q ss_pred             -eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 -FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 -~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       ...  .....+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       231 ~~~~--~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG  270 (277)
T 3gvc_A          231 SMIA--RLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADG  270 (277)
T ss_dssp             HHHH--HHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhh--ccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECC
Confidence             000  001236789999999999997653  3478898886

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.52  E-value=5.7e-07  Score=71.93  Aligned_cols=154  Identities=13%  Similarity=0.050  Sum_probs=95.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-c-------------------hhchHHHHHHHHHhCCcc--
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-E-------------------VEDQFKLIAAIKEVGNIK--   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-~-------------------~~~~~~li~aa~~~g~vk--   56 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++.. .                   +.+..++++++...- .+  
T Consensus        59 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g  137 (259)
T 3edm_A           59 SALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM-AKGG  137 (259)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEE
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence            47889999999999888876       789999999743 1                   345567777776543 33  


Q ss_pred             EEEc-CCCCCC-CCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSN-VDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~-~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.... ..    .+....|..+|+.++.+.+.      .++.+..|+||++...+...+....       ....
T Consensus       138 ~iv~isS~~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~-------~~~~  206 (259)
T 3edm_A          138 AIVTFSSQAGRDGG----GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPE-------VRER  206 (259)
T ss_dssp             EEEEECCHHHHHCC----STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------
T ss_pred             EEEEEcCHHhccCC----CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChH-------HHHH
Confidence            7777 664322 11    12345677799999877753      3489999999998876543321110       0001


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYS  172 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t  172 (258)
                      .........+.+++|+|+++..++.+..  -.|+.+++.| +...+
T Consensus       207 ~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG-g~~~~  251 (259)
T 3edm_A          207 VAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDING-GVLFS  251 (259)
T ss_dssp             --------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESB-CSSBC
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECC-CcCCC
Confidence            1111111236689999999999987653  2588999987 43443

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.51  E-value=2.7e-07  Score=74.15  Aligned_cols=151  Identities=11%  Similarity=0.070  Sum_probs=95.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+...+++++    ++.+.-
T Consensus        71 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  150 (266)
T 4egf_A           71 DVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEG  150 (266)
T ss_dssp             CEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence            57889999999988887765       7899999998531                   23344455554    333312


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .+....|..+|+.++.+.+.       .++.+..|+||++...+.......     . ....
T Consensus       151 g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~-~~~~  220 (266)
T 4egf_A          151 GAIITVASAAALAP----LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD-----E-AKSA  220 (266)
T ss_dssp             EEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS-----H-HHHH
T ss_pred             eEEEEEcchhhccC----CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC-----h-HHHH
Confidence            47887 66544322    12345677799998876653       589999999999987543221100     0 0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       221 ~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 4egf_A          221 PMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDG  261 (266)
T ss_dssp             HHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECC
Confidence            00000111136689999999999988652  3478888876

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=98.51  E-value=9.4e-07  Score=71.36  Aligned_cols=150  Identities=11%  Similarity=0.105  Sum_probs=95.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++    ++.+.-
T Consensus        82 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~  161 (276)
T 3r1i_A           82 KALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLG  161 (276)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            47789999999999988876       7899999998531                   23334445544    344412


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+........  .++...|..+|+.++.+.+.       .++.+..|+||++...+.......         ..
T Consensus       162 g~iv~isS~~~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---------~~  230 (276)
T 3r1i_A          162 GTIITTASMSGHIINI--PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY---------HA  230 (276)
T ss_dssp             EEEEEECCGGGTSCCC--SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG---------HH
T ss_pred             cEEEEECchHhcccCC--CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH---------HH
Confidence            56777 6543322111  01234577799999877653       589999999999987654322110         00


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+........+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       231 ~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  271 (276)
T 3r1i_A          231 LWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDG  271 (276)
T ss_dssp             HHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEECc
Confidence            00000011126789999999999988653  2478888876

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.51  E-value=2.5e-07  Score=75.37  Aligned_cols=150  Identities=13%  Similarity=0.162  Sum_probs=98.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHhC-CccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVG-NIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g-~vk~   57 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                    +.+..++++++...- +-.+
T Consensus        98 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~  177 (291)
T 3ijr_A           98 KCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDV  177 (291)
T ss_dssp             CEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCE
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCE
Confidence            47788999999998888776       6899999987421                    345567777776542 1347


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +|. |+.......    +....|..+|+.++.+.+.       .++.+..|+||.+...+......       .......
T Consensus       178 iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~~~~~  246 (291)
T 3ijr_A          178 IINTASIVAYEGN----ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD-------EKKVSQF  246 (291)
T ss_dssp             EEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC-------HHHHHHT
T ss_pred             EEEEechHhcCCC----CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC-------HHHHHHH
Confidence            887 664332111    1245677799999877653       48999999999998865422100       0001111


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ........+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       247 ~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  285 (291)
T 3ijr_A          247 GSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNG  285 (291)
T ss_dssp             TTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECC
Confidence            111112236789999999999987653  3578888876

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=98.50  E-value=5.1e-06  Score=65.21  Aligned_cols=130  Identities=15%  Similarity=0.089  Sum_probs=86.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++.    +.+ -
T Consensus        53 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~  131 (235)
T 3l77_A           53 EVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG-G  131 (235)
T ss_dssp             CEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             eEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C
Confidence            57788999999999999887       6899999998531                   344455555553    333 3


Q ss_pred             cEEEcCCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           56 KRFFPTEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        56 k~~v~S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      ..++.|+.......    +....|..+|+.++.+.+.     .++.++.|+||++...+......               
T Consensus       132 ~ii~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~---------------  192 (235)
T 3l77_A          132 LALVTTSDVSARLI----PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG---------------  192 (235)
T ss_dssp             EEEEECCGGGSSCC----TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC---------------
T ss_pred             cEEEEecchhcccC----CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC---------------
Confidence            33444443222211    1234577799999887764     58999999999887655432110               


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      . .....+.+.+|+|+++..+++++.
T Consensus       193 ~-~~~~~~~~p~dva~~v~~l~~~~~  217 (235)
T 3l77_A          193 K-PKEKGYLKPDEIAEAVRCLLKLPK  217 (235)
T ss_dssp             C-CGGGTCBCHHHHHHHHHHHHTSCT
T ss_pred             c-ccccCCCCHHHHHHHHHHHHcCCC
Confidence            0 011146789999999999999874

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.50  E-value=6.5e-08  Score=77.18  Aligned_cols=150  Identities=9%  Similarity=-0.017  Sum_probs=86.6

Q ss_pred             eccCCCHHHHHHhhCC----CcEEEEccCccc------------hhchHHHHHHHH----HhCCccEEEc-CCCCCCCCC
Q 025054           11 QGDLHDHESLVKAIKP----VDVVISAVGRTE------------VEDQFKLIAAIK----EVGNIKRFFP-TEYGSNVDA   69 (258)
Q Consensus        11 ~~D~~d~~~l~~al~g----~d~Vi~~~~~~~------------~~~~~~li~aa~----~~g~vk~~v~-S~~~~~~~~   69 (258)
                      .+|++|.+++.++++.    .|+|||+++...            +.+..++++++.    +.+ ..++|. |+.......
T Consensus        43 ~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~  121 (257)
T 1fjh_A           43 STAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLA  121 (257)
T ss_dssp             TSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSC
T ss_pred             ccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccc
Confidence            4677888888888864    499999998532            344555566554    556 789998 665433100


Q ss_pred             C------------------------CCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC
Q 025054           70 G------------------------HPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA  118 (258)
Q Consensus        70 ~------------------------~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~  118 (258)
                      .                        .+.++...|..+|..++.+.+.       .++.+++|+||.+...+........ 
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-  200 (257)
T 1fjh_A          122 FDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP-  200 (257)
T ss_dssp             GGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------------
T ss_pred             cccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch-
Confidence            0                        1111234566799999887754       5899999999999886643320000 


Q ss_pred             CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                        ............  ...+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       201 --~~~~~~~~~~~~--~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdg  246 (257)
T 1fjh_A          201 --RYGESIAKFVPP--MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDG  246 (257)
T ss_dssp             ----------CCCS--TTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             --hHHHHHHhcccc--cCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECC
Confidence              000000000000  0136899999999999998652  3478888876

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.50  E-value=1.4e-06  Score=70.06  Aligned_cols=148  Identities=14%  Similarity=0.117  Sum_probs=96.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~   57 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+...+++++...  + -.+
T Consensus        82 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-~g~  160 (271)
T 3v2g_A           82 RAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-GGR  160 (271)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-TCE
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCE
Confidence            46788999999999888776       7899999998531                   34556677777654  2 357


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +|. |+.......   .++...|..+|+.++.+.+.       .|+.+..|+||++...+......       ... ...
T Consensus       161 iv~isS~~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-------~~~-~~~  229 (271)
T 3v2g_A          161 IITIGSNLAELVP---WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD-------HAE-AQR  229 (271)
T ss_dssp             EEEECCGGGTCCC---STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS-------SHH-HHH
T ss_pred             EEEEeChhhccCC---CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch-------hHH-HHH
Confidence            776 553222211   12345677799999877653       48999999999998765432110       000 000


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      . ......+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       230 ~-~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  267 (271)
T 3v2g_A          230 E-RIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDG  267 (271)
T ss_dssp             H-TCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             h-cCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCc
Confidence            0 0001136789999999999987642  3478888875

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=98.50  E-value=2.4e-06  Score=67.78  Aligned_cols=147  Identities=15%  Similarity=0.085  Sum_probs=90.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc----c----------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT----E----------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~----~----------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|++|++++.++++       +.|++||+++..    .                +.+..++++++    ++.+ 
T Consensus        47 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-  125 (248)
T 3asu_A           47 NLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-  125 (248)
T ss_dssp             TEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            57889999999999988875       689999999742    0                23334444444    3566 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCccc-ccCcCCCCCCCCCCCCCCc
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSF-GFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~-~~~~~~~~~~~~~~~~~~~  125 (258)
                      ..++|. |+......    .++...|..+|+.++.+.+.       .|+.++.|+||++. ..+...... .   .....
T Consensus       126 ~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~-~---~~~~~  197 (248)
T 3asu_A          126 HGHIINIGSTAGSWP----YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFK-G---DDGKA  197 (248)
T ss_dssp             CCEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------
T ss_pred             CceEEEEccchhccC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhccc-C---chHHH
Confidence            688998 76544322    12345677799999887653       48999999999998 444321000 0   00000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEc
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLR  165 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~  165 (258)
                      ....    ....+.+.+|+|++++.++.++. ..++.+.+.
T Consensus       198 ~~~~----~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~  234 (248)
T 3asu_A          198 EKTY----QNTVALTPEDVSEAVWWVSTLPAHVNINTLEMM  234 (248)
T ss_dssp             -----------CCBCHHHHHHHHHHHHHSCTTCCCCEEEEC
T ss_pred             HHHH----hccCCCCHHHHHHHHHHHhcCCccceeeEEEEc
Confidence            0001    01224689999999999998764 346666665

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=98.49  E-value=2e-06  Score=68.78  Aligned_cols=129  Identities=11%  Similarity=0.088  Sum_probs=83.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-c-------------------hhchHHHHHH----HHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-E-------------------VEDQFKLIAA----IKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-~-------------------~~~~~~li~a----a~~~g~   54 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++.. .                   +.+..+++++    .++.+ 
T Consensus        79 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-  157 (262)
T 3rkr_A           79 EAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-  157 (262)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             ceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-
Confidence            47889999999999888775       589999999861 0                   2333444444    44566 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+......    .++...|..+|+.++.+.+.       .++.++.|+||++...+.....       .  . 
T Consensus       158 ~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~--~-  223 (262)
T 3rkr_A          158 RGHIINISSLAGKNP----VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS-------A--K-  223 (262)
T ss_dssp             CCEEEEECSSCSSCC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------
T ss_pred             CceEEEEechhhcCC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc-------c--c-
Confidence            678998 76554332    12345677799998877643       5899999999988765432210       0  0 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                            .....+++.+|+|+++..++.++
T Consensus       224 ------~~~~~~~~p~dvA~~v~~l~s~~  246 (262)
T 3rkr_A          224 ------KSALGAIEPDDIADVVALLATQA  246 (262)
T ss_dssp             -----------CCCHHHHHHHHHHHHTCC
T ss_pred             ------cccccCCCHHHHHHHHHHHhcCc
Confidence                  11234678999999999999876

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=98.49  E-value=2.4e-07  Score=74.67  Aligned_cols=127  Identities=11%  Similarity=0.072  Sum_probs=87.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      ++.++.+|++|.+++.++++       ++|+|||+++...                   +.+    .+.++..+++.+ .
T Consensus        81 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~  159 (272)
T 1yb1_A           81 KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-H  159 (272)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C
T ss_pred             eEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            57889999999998888775       7899999997421                   222    344455555667 7


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh----------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA----------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~----------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      .++|. |+.......    ++...|..+|+.++.+.+.          .++.+++|+||++...+...           .
T Consensus       160 ~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-----------~  224 (272)
T 1yb1_A          160 GHIVTVASAAGHVSV----PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----------P  224 (272)
T ss_dssp             EEEEEECCCC-CCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----------T
T ss_pred             CEEEEEechhhcCCC----CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-----------c
Confidence            89998 665443211    1234566799998876642          37999999999887654210           0


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      .       .....+++.+|+|++++.++.++
T Consensus       225 ~-------~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          225 S-------TSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             H-------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             c-------ccccCCCCHHHHHHHHHHHHHcC
Confidence            0       01124689999999999999875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.49  E-value=5.7e-07  Score=71.69  Aligned_cols=155  Identities=11%  Similarity=0.052  Sum_probs=95.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                    +.+..++++++    ++.+ 
T Consensus        51 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-  129 (254)
T 3kzv_A           51 RFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-  129 (254)
T ss_dssp             GEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            47889999999998888776       7899999998521                    33445555555    5544 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCC-CCCCCCceE
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGA-TAPPRENIL  127 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~~~~~~  127 (258)
                       .++|. |+......    .++...|..+|+.++.+.+.     .++.+..|+||++...+...+..... .........
T Consensus       130 -g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  204 (254)
T 3kzv_A          130 -GNVVFVSSDACNMY----FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLK  204 (254)
T ss_dssp             -CEEEEECCSCCCCS----SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHH
T ss_pred             -CeEEEEcCchhccC----CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHH
Confidence             57887 66544322    12345677799999877754     48999999999998766543211000 000000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC--C-CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP--R-TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~-~~~~~~~l~g  166 (258)
                      ..........+.+.+|+|++++.++.++  . -.|+.+++.|
T Consensus       205 ~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg  246 (254)
T 3kzv_A          205 MFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYND  246 (254)
T ss_dssp             HHHHHHTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTC
T ss_pred             HHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecC
Confidence            0100011123779999999999998765  2 3577888875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.49  E-value=1.1e-06  Score=70.44  Aligned_cols=137  Identities=16%  Similarity=0.159  Sum_probs=83.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|.+++.++++       +.|++||+++...                   +.+.    +.++...++.+ .
T Consensus        54 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~  132 (264)
T 3tfo_A           54 TALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-S  132 (264)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-C
Confidence            36778899999998888765       7899999998531                   2233    34444445566 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.     .++.+..|+||++...+........       .....
T Consensus       133 g~IV~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~-------~~~~~  201 (264)
T 3tfo_A          133 GQIINIGSIGALSVV----PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEE-------TMAAM  201 (264)
T ss_dssp             EEEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------------
T ss_pred             eEEEEEcCHHHcccC----CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchh-------HHHHH
Confidence            78887 665443221    2345577799998877653     3899999999988776543321100       00000


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      .  .....+.+.+|+|++++.+++++.
T Consensus       202 ~--~~~~~~~~pedvA~~v~~l~s~~~  226 (264)
T 3tfo_A          202 D--TYRAIALQPADIARAVRQVIEAPQ  226 (264)
T ss_dssp             --------CCCHHHHHHHHHHHHHSCT
T ss_pred             H--hhhccCCCHHHHHHHHHHHhcCCc
Confidence            0  011124689999999999999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.49  E-value=1.8e-07  Score=73.05  Aligned_cols=157  Identities=12%  Similarity=-0.015  Sum_probs=98.0

Q ss_pred             cccCceeEEe------ccCCCHHHHHHhhC---CCcEEEEccCcc-c-------------------hhchHHHHHHHHHh
Q 025054            2 LYMINCLIAQ------GDLHDHESLVKAIK---PVDVVISAVGRT-E-------------------VEDQFKLIAAIKEV   52 (258)
Q Consensus         2 l~~~gv~~~~------~D~~d~~~l~~al~---g~d~Vi~~~~~~-~-------------------~~~~~~li~aa~~~   52 (258)
                      |.+.|.+++.      +|++|++++.++++   +.|++||+++.. .                   +.+..++++++...
T Consensus        26 l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  105 (223)
T 3uce_A           26 LESEHTIVHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARY  105 (223)
T ss_dssp             HCSTTEEEEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             HHHCCCEEEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhh
Confidence            4456777665      68999998888875   689999999853 1                   34455666666554


Q ss_pred             C-CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           53 G-NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        53 g-~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      - +-.++|. |+......    .++...|..+|+.++.+.+.     ..+.+..|+||++...+........    ....
T Consensus       106 ~~~~g~iv~~sS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~----~~~~  177 (223)
T 3uce_A          106 LKQGGSITLTSGMLSRKV----VANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADD----RDAM  177 (223)
T ss_dssp             EEEEEEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHH----HHHH
T ss_pred             ccCCeEEEEecchhhccC----CCCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhh----HHHH
Confidence            2 0126777 66543322    12345677799999877654     2389999999998876543211000    0000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                      ............+.+++|+|+++..+++.+...|+.+++.|
T Consensus       178 ~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdg  218 (223)
T 3uce_A          178 YQRTQSHLPVGKVGEASDIAMAYLFAIQNSYMTGTVIDVDG  218 (223)
T ss_dssp             HHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHhhcCCCCCccCHHHHHHHHHHHccCCCCCCcEEEecC
Confidence            00000001112367899999999999886544688899886

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=98.48  E-value=1.6e-07  Score=74.47  Aligned_cols=157  Identities=12%  Similarity=0.021  Sum_probs=97.9

Q ss_pred             CceeEEeccCCCHHHHHHhhC-----CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCcc--EE
Q 025054            5 INCLIAQGDLHDHESLVKAIK-----PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIK--RF   58 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-----g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk--~~   58 (258)
                      ..+.++.+|++|++++.++++     +.|++||+++...                   +.+..++++++...- .+  ++
T Consensus        44 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~i  122 (244)
T 4e4y_A           44 ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL-KVGASI  122 (244)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE-EEEEEE
T ss_pred             ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh-ccCcEE
Confidence            456789999999999988876     7899999998531                   345566666665543 22  67


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC--CCCC-CCceE
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA--TAPP-RENIL  127 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~--~~~~-~~~~~  127 (258)
                      |. |+.......    +....|..+|+.++.+.+.       .|+.++.|+||++...+.........  .... .....
T Consensus       123 v~~sS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  198 (244)
T 4e4y_A          123 VFNGSDQCFIAK----PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQK  198 (244)
T ss_dssp             EEECCGGGTCCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred             EEECCHHHccCC----CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHH
Confidence            77 665433221    2344567799999877653       58999999999998754321100000  0000 00000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+++|+|++++.++.++.  -.|+.+++.|
T Consensus       199 ~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  239 (244)
T 4e4y_A          199 QEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDG  239 (244)
T ss_dssp             HHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECC
Confidence            00111111236789999999999998653  2478888876

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.48  E-value=1.2e-06  Score=69.21  Aligned_cols=138  Identities=8%  Similarity=-0.041  Sum_probs=83.8

Q ss_pred             CceeEEeccCCCHHHHHHhhC---------CCcEEEEccCccc--------------------hhchHHHHHHHHH----
Q 025054            5 INCLIAQGDLHDHESLVKAIK---------PVDVVISAVGRTE--------------------VEDQFKLIAAIKE----   51 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~---------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~----   51 (258)
                      .++.++.+|++|.+++.++++         ++|+|||+++...                    +.+..++++++..    
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  130 (250)
T 1yo6_A           51 SRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKN  130 (250)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH
T ss_pred             CceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence            357899999999999988887         8999999997421                    2333445555432    


Q ss_pred             h------CC----ccEEEc-CCCCCCCCCC---CCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc
Q 025054           52 V------GN----IKRFFP-TEYGSNVDAG---HPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL  110 (258)
Q Consensus        52 ~------g~----vk~~v~-S~~~~~~~~~---~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~  110 (258)
                      .      ++    ..++|. |+........   ....+...|..+|+.++.+.+.       .++.+++|+||++...+.
T Consensus       131 ~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  210 (250)
T 1yo6_A          131 AASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             HHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred             cccccCCCcccCCCcEEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCC
Confidence            2      21    367887 6543322110   0002344566799999887753       389999999987765432


Q ss_pred             CCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEc
Q 025054          111 PTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLR  165 (258)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~  165 (258)
                      ..                       ..+++.+|+|+.++.++.++. . .|+.+.+.
T Consensus       211 ~~-----------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~  244 (250)
T 1yo6_A          211 GK-----------------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRN  244 (250)
T ss_dssp             -------------------------------HHHHHHHHHHHTTCCGGGTTCEEETT
T ss_pred             CC-----------------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEEC
Confidence            10                       136789999999999998763 2 35555444

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=98.47  E-value=3.3e-07  Score=73.64  Aligned_cols=148  Identities=13%  Similarity=0.047  Sum_probs=96.6

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH-----HhC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK-----EVG   53 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~-----~~g   53 (258)
                      .++.++.+|++|.+++.++++       +.|+|||+++...                   +.+..++++++.     +.+
T Consensus        76 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  155 (267)
T 4iiu_A           76 GNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ  155 (267)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            357889999999999888876       7899999997531                   344456666653     445


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       ..++|. |+.......    ++...|..+|+.++.+.+.       .++.++.|+||++...+......        ..
T Consensus       156 -~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~  222 (267)
T 4iiu_A          156 -GGRIITLSSVSGVMGN----RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEES--------AL  222 (267)
T ss_dssp             -CEEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHH--------HH
T ss_pred             -CcEEEEEcchHhccCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHH--------HH
Confidence             678887 664332211    2345677799987766543       48999999999998765432100        00


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..... ......+.+.+|+|+++..++.+..  -.|+.+++.|
T Consensus       223 ~~~~~-~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdG  264 (267)
T 4iiu_A          223 KEAMS-MIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISING  264 (267)
T ss_dssp             HHHHH-TCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHh-cCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCC
Confidence            00000 0111236789999999999988652  3578888875

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.47  E-value=6.6e-07  Score=71.25  Aligned_cols=137  Identities=11%  Similarity=0.044  Sum_probs=80.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHH----HHHHHHHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFK----LIAAIKEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~----li~aa~~~g~vk   56 (258)
                      .+.++.+|++|.+++.++++      +.|++||+++...                   +.+...    ++...++.+ ..
T Consensus        57 ~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g  135 (252)
T 3h7a_A           57 RIVARSLDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QG  135 (252)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             eEEEEECcCCCHHHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-Cc
Confidence            47889999999999988886      6799999998521                   223333    444446666 67


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCe-EEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPH-TYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~-t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.       .|+.+ .++.||.+...+...... .       ...
T Consensus       136 ~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~-~-------~~~  203 (252)
T 3h7a_A          136 KIFFTGATASLRGG----SGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE-Q-------MFG  203 (252)
T ss_dssp             EEEEEEEGGGTCCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------
T ss_pred             EEEEECCHHHcCCC----CCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch-h-------hhh
Confidence            8887 654433221    2345677799999876653       57888 899999887765433210 0       000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      .... ..+..+.+.+|+|++++.+++++.
T Consensus       204 ~~~~-~~~~~~~~pedvA~~~~~l~s~~~  231 (252)
T 3h7a_A          204 KDAL-ANPDLLMPPAAVAGAYWQLYQQPK  231 (252)
T ss_dssp             -----------CCHHHHHHHHHHHHHCCG
T ss_pred             hhhh-cCCccCCCHHHHHHHHHHHHhCch
Confidence            0111 112238899999999999998763

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=98.46  E-value=6.1e-07  Score=78.26  Aligned_cols=152  Identities=16%  Similarity=0.149  Sum_probs=100.5

Q ss_pred             ceeEEeccCCCHHHHHHhhCCC------cEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEEc
Q 025054            6 NCLIAQGDLHDHESLVKAIKPV------DVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~------d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      .+.++.+|++|.+++.++++++      |+|||+++...                   +.+..++.++++..+ +++||.
T Consensus       280 ~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~  358 (486)
T 2fr1_A          280 RTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVL  358 (486)
T ss_dssp             EEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEE
T ss_pred             EEEEEEeCCCCHHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEE
Confidence            3678999999999999998865      99999998521                   566788899988887 899997


Q ss_pred             -CCCCCCCCCCCCCCCCccchhhHHHHHHHH---HhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCcee
Q 025054           61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAI---EAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKA  136 (258)
Q Consensus        61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l---~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  136 (258)
                       ||.......    +....|..+|...+.+.   +..|+++++|++|.+.+.....  ..     .   .....  ...+
T Consensus       359 ~SS~a~~~g~----~g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~--~~-----~---~~~~~--~~g~  422 (486)
T 2fr1_A          359 FSSFASAFGA----PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAE--GP-----V---ADRFR--RHGV  422 (486)
T ss_dssp             EEEHHHHTCC----TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC----------------------CT--TTTE
T ss_pred             EcChHhcCCC----CCCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccc--hh-----H---HHHHH--hcCC
Confidence             664221111    12456777898887654   4579999999999887653211  00     0   00011  1225


Q ss_pred             eeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHH
Q 025054          137 IFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWE  181 (258)
Q Consensus       137 ~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~  181 (258)
                      .+++.+|+++++..++..+.  .. +.+.    .+.+..+...+.
T Consensus       423 ~~i~~e~~a~~l~~~l~~~~--~~-~~v~----~~d~~~~~~~~~  460 (486)
T 2fr1_A          423 IEMPPETACRALQNALDRAE--VC-PIVI----DVRWDRFLLAYT  460 (486)
T ss_dssp             ECBCHHHHHHHHHHHHHTTC--SS-CEEC----EECHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHhCCC--Ce-EEEE----eCCHHHHhhhhc
Confidence            67899999999999998753  22 2232    356777665543

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=98.46  E-value=8e-08  Score=77.14  Aligned_cols=150  Identities=11%  Similarity=0.058  Sum_probs=95.2

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhC-C
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVG-N   54 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g-~   54 (258)
                      ..++.+|++|++++.++++       +.|+|||+++...                        +.+..++++++...- +
T Consensus        61 ~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  140 (265)
T 1qsg_A           61 DIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP  140 (265)
T ss_dssp             CCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             cEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence            4688999999998888776       6799999997421                        334556777776542 0


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+......    .++...|..+|+.++.+.+.       .++.+++|+||++.+.+.......     . ...
T Consensus       141 ~g~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~-~~~  210 (265)
T 1qsg_A          141 GSALLTLSYLGAERA----IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF-----R-KML  210 (265)
T ss_dssp             EEEEEEEECGGGTSB----CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH-----H-HHH
T ss_pred             CCEEEEEcchhhccC----CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccccc-----H-HHH
Confidence            137887 66443221    12344677799999887753       489999999999987654321100     0 000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...........+.+++|+|++++.++.++.  ..|+.+++.|
T Consensus       211 ~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg  252 (265)
T 1qsg_A          211 AHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG  252 (265)
T ss_dssp             HHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECC
Confidence            000000000136789999999999987643  2477888876

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.46  E-value=4.2e-07  Score=73.56  Aligned_cols=156  Identities=15%  Similarity=0.155  Sum_probs=98.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH------HhC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK------EVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~------~~g   53 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +.+..++++++.      +.+
T Consensus        74 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~  153 (279)
T 3sju_A           74 DVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG  153 (279)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC
Confidence            47889999999998887775       6899999998531                   344556666553      356


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-CC-CCCCC-
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-PG-ATAPP-  122 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~~-~~~~~-  122 (258)
                       ..++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||++...+...... .. ..... 
T Consensus       154 -~g~iV~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  228 (279)
T 3sju_A          154 -WGRIVNIASTGGKQGV----MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTE  228 (279)
T ss_dssp             -CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCH
T ss_pred             -CcEEEEECChhhccCC----CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCCh
Confidence             678888 765443221    2345677799988877653       58999999999998754321100 00 00000 


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...............+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       229 ~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG  274 (279)
T 3sju_A          229 QEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCG  274 (279)
T ss_dssp             HHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEEST
T ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            0000111111111236789999999999988753  3578888876

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=98.45  E-value=4.1e-07  Score=73.76  Aligned_cols=151  Identities=11%  Similarity=0.056  Sum_probs=95.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc----------c-------------hhchHHHHHHHHHhC--
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT----------E-------------VEDQFKLIAAIKEVG--   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~----------~-------------~~~~~~li~aa~~~g--   53 (258)
                      ++.++.+|++|.+++.++++       +.|+|||+++..          .             +.+..++++++...-  
T Consensus        72 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  151 (285)
T 2p91_A           72 SDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG  151 (285)
T ss_dssp             CCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT
T ss_pred             CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            36789999999998888776       689999999742          1             345567777776542  


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      +-.++|. |+.+.....    +....|..+|+.++.+.+.       .|+.+++|+||++.+.+.......     . ..
T Consensus       152 ~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~-~~  221 (285)
T 2p91_A          152 RNGAIVTLSYYGAEKVV----PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF-----H-LL  221 (285)
T ss_dssp             SCCEEEEEECGGGTSBC----TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH-----H-HH
T ss_pred             cCCEEEEEccchhccCC----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch-----H-HH
Confidence            0258887 665433221    2344677799999877653       589999999999987653221000     0 00


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ............+.+++|+|++++.++.+..  ..|+.+++.|
T Consensus       222 ~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  264 (285)
T 2p91_A          222 MEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDN  264 (285)
T ss_dssp             HHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence            0000000000125789999999999987642  2477888875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=98.45  E-value=7.8e-07  Score=73.32  Aligned_cols=156  Identities=15%  Similarity=0.106  Sum_probs=96.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+...+++++    ++.+.-
T Consensus       108 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~  187 (317)
T 3oec_A          108 RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQG  187 (317)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSC
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC
Confidence            47788999999999888776       7899999998531                   33444555555    333313


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCC------CCCCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPT------MAQPGATAP  121 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~------~~~~~~~~~  121 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||++...+...      +.. .....
T Consensus       188 g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~  262 (317)
T 3oec_A          188 GSVIFVSSTVGLRGA----PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLP-HLENP  262 (317)
T ss_dssp             EEEEEECCGGGSSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCT-TCSSC
T ss_pred             CEEEEECcHHhcCCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhh-hcccc
Confidence            56777 665433221    2244566799999877653       58999999999998754311      000 00000


Q ss_pred             CCC-ceEec-cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          122 PRE-NILFY-GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       122 ~~~-~~~~~-g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ... ..... .....+..+++++|+|++++.++.+..  -.|+.+++.|
T Consensus       263 ~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdG  311 (317)
T 3oec_A          263 TREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDG  311 (317)
T ss_dssp             CHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             chhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECc
Confidence            000 00000 111122468899999999999987653  2478888876

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.45  E-value=4e-07  Score=73.03  Aligned_cols=155  Identities=16%  Similarity=0.135  Sum_probs=95.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHH----HhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIK----EVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~----~~g~   54 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                    +.+..++++++.    +.+ 
T Consensus        61 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-  139 (264)
T 3ucx_A           61 RALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-  139 (264)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            47889999999999888775       6899999996421                    333445555543    333 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCC--CCCCCC-C
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQP--GATAPP-R  123 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~--~~~~~~-~  123 (258)
                       .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||++...........  ...... .
T Consensus       140 -g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  214 (264)
T 3ucx_A          140 -GAVVNVNSMVVRHSQ----AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVE  214 (264)
T ss_dssp             -CEEEEECCGGGGCCC----TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHH
T ss_pred             -CEEEEECcchhccCC----CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHH
Confidence             47887 665433221    2345677799998877653       689999999999987543211000  000000 0


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..............+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       215 ~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  259 (264)
T 3ucx_A          215 DIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNC  259 (264)
T ss_dssp             HHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            000111111122237799999999999987652  3588898876

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.44  E-value=6e-07  Score=72.71  Aligned_cols=157  Identities=14%  Similarity=0.079  Sum_probs=98.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~   57 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+..++++++...  + ..+
T Consensus        80 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~  158 (283)
T 1g0o_A           80 DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGR  158 (283)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCE
T ss_pred             CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCe
Confidence            47788999999988877664       6899999998431                   45567788888765  5 578


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-C--CCCCCCCCCce
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-Q--PGATAPPRENI  126 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-~--~~~~~~~~~~~  126 (258)
                      +|. |+........   .+...|..+|+.++.+.+.       .|+.+++|+||++...+..... .  ...........
T Consensus       159 iv~isS~~~~~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  235 (283)
T 1g0o_A          159 LILMGSITGQAKAV---PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEV  235 (283)
T ss_dssp             EEEECCGGGTCSSC---SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHH
T ss_pred             EEEEechhhccCCC---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHH
Confidence            887 6654332211   1244577799999877653       5899999999999876432110 0  00000000000


Q ss_pred             EeccC--CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGD--GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~--g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..+..  ......+.+.+|+|++++.++.++.  -.|+.+.+.|
T Consensus       236 ~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdg  279 (283)
T 1g0o_A          236 DEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  279 (283)
T ss_dssp             HHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            00000  0001126789999999999998653  3577888875

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=98.44  E-value=8.3e-07  Score=71.56  Aligned_cols=147  Identities=16%  Similarity=0.064  Sum_probs=94.4

Q ss_pred             ceeEEeccCCCH----HHHHHhhC-------CCcEEEEccCccc------------------------------hhchHH
Q 025054            6 NCLIAQGDLHDH----ESLVKAIK-------PVDVVISAVGRTE------------------------------VEDQFK   44 (258)
Q Consensus         6 gv~~~~~D~~d~----~~l~~al~-------g~d~Vi~~~~~~~------------------------------~~~~~~   44 (258)
                      .+.++.+|++|.    +++.++++       +.|+|||+++...                              +.+..+
T Consensus        63 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  142 (276)
T 1mxh_A           63 SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLF  142 (276)
T ss_dssp             CEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHH
T ss_pred             ceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHH
Confidence            478899999999    88887775       7899999998421                              233446


Q ss_pred             HHHHHHH---hCCc------cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc
Q 025054           45 LIAAIKE---VGNI------KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG  107 (258)
Q Consensus        45 li~aa~~---~g~v------k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~  107 (258)
                      +++++..   .+ .      .++|. |+......    .++...|..+|+.++.+.+.       .|+.+++|+||++.+
T Consensus       143 l~~~~~~~~~~~-~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t  217 (276)
T 1mxh_A          143 LIRAFARRQGEG-GAWRSRNLSVVNLCDAMTDLP----LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL  217 (276)
T ss_dssp             HHHHHHHTC--------CCCEEEEEECCGGGGSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred             HHHHHHHHHhcC-CCCCCCCcEEEEECchhhcCC----CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccC
Confidence            6777765   34 4      78887 66543322    12345677799999877653       489999999999987


Q ss_pred             cCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          108 FFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +  ..+..      .. ...+.......+.+.+++|+|++++.++.++.  ..|+.+++.|
T Consensus       218 ~--~~~~~------~~-~~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg  269 (276)
T 1mxh_A          218 P--PAMPQ------ET-QEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDG  269 (276)
T ss_dssp             C--SSSCH------HH-HHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             C--ccCCH------HH-HHHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            6  11100      00 00000000001127799999999999987643  2478888875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=98.44  E-value=1.4e-06  Score=70.65  Aligned_cols=156  Identities=15%  Similarity=0.106  Sum_probs=96.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHH----HhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIK----EVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~----~~g~   54 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                    +.+..++++++.    +.++
T Consensus        77 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~  156 (286)
T 3uve_A           77 RIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR  156 (286)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence            47888999999999888776       7899999998421                    233445555543    3331


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-----CCCCCCCC
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-----AQPGATAP  121 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-----~~~~~~~~  121 (258)
                      -.++|. |+.......    +....|..+|+.++.+.+.       .++.+..|+||++...+....     ........
T Consensus       157 ~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  232 (286)
T 3uve_A          157 GGSIILTSSVGGLKAY----PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENP  232 (286)
T ss_dssp             CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSC
T ss_pred             CcEEEEECchhhccCC----CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcccccccc
Confidence            357887 665443221    2345677799998877653       589999999999987654310     00000000


Q ss_pred             CCCc-eEe--ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          122 PREN-ILF--YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       122 ~~~~-~~~--~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .... ...  ... ..+..+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       233 ~~~~~~~~~~~~~-~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  281 (286)
T 3uve_A          233 GPDDMAPICQMFH-TLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDA  281 (286)
T ss_dssp             CHHHHHHHHHTTC-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             chhhHHHHHHhhh-ccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence            0000 000  111 112357899999999999997653  2478898876

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.43  E-value=1.7e-06  Score=68.76  Aligned_cols=147  Identities=12%  Similarity=0.034  Sum_probs=94.6

Q ss_pred             ceeEEeccC--CCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHH----HHh
Q 025054            6 NCLIAQGDL--HDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAI----KEV   52 (258)
Q Consensus         6 gv~~~~~D~--~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~   52 (258)
                      .+.++.+|+  .|.+++.++++       +.|++||+++...                    +.+...+++++    ++.
T Consensus        63 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~  142 (252)
T 3f1l_A           63 QPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS  142 (252)
T ss_dssp             CCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             CceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC
Confidence            578899999  88888777765       7899999998521                    33444555555    555


Q ss_pred             CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      + ..++|. |+.......    +....|..+|+.++.+.+.      ..+.+..|.||++...+......      .   
T Consensus       143 ~-~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~------~---  208 (252)
T 3f1l_A          143 D-AGSLVFTSSSVGRQGR----ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFP------T---  208 (252)
T ss_dssp             S-SCEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCT------T---
T ss_pred             C-CCEEEEECChhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCC------c---
Confidence            6 678887 665433221    2345677799999877654      23889999999887654322100      0   


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHH
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFK  174 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~  174 (258)
                             .....+.+.+|+|.+++.++.+..  -.|+.+.+.| +...++.
T Consensus       209 -------~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdg-G~~~~~~  251 (252)
T 3f1l_A          209 -------EDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQP-GRKPGIS  251 (252)
T ss_dssp             -------CCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSC-C------
T ss_pred             -------cchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCC-CcCCCCC
Confidence                   011135688999999999988753  3478888876 5555554

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=98.43  E-value=8.8e-07  Score=71.24  Aligned_cols=157  Identities=13%  Similarity=0.082  Sum_probs=98.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCcc--E
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIK--R   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk--~   57 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.+..++++++...- .+  +
T Consensus        69 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~-~~~g~  147 (270)
T 3is3_A           69 DAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL-TEGGR  147 (270)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC-CTTCE
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hcCCe
Confidence            47889999999999888776       6899999998531                   445567777777654 33  7


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCC---CCC-CCc
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGAT---APP-REN  125 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~---~~~-~~~  125 (258)
                      +|. |+......   +.++...|..+|+.++.+.+.       .|+.+..|+||++...+..........   ... ...
T Consensus       148 iv~isS~~~~~~---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  224 (270)
T 3is3_A          148 IVLTSSNTSKDF---SVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQR  224 (270)
T ss_dssp             EEEECCTTTTTC---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHH
T ss_pred             EEEEeCchhccC---CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHH
Confidence            887 66442211   112345677799999877653       589999999999987654311000000   000 000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ............+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       225 ~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  267 (270)
T 3is3_A          225 QQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDG  267 (270)
T ss_dssp             HHHHHHHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence            0000000111236789999999999987653  2478888875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.42  E-value=4.7e-07  Score=71.85  Aligned_cols=137  Identities=14%  Similarity=0.110  Sum_probs=88.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      ++.++.+|++|++++.++++       ++|++||+++...                   +.+..++++++.    +.+  
T Consensus        57 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--  134 (247)
T 2jah_A           57 KVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--  134 (247)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--
Confidence            47889999999998887775       7899999997421                   334455555554    333  


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-  126 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+++|+||++...+.......    .....+ 
T Consensus       135 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~~~  206 (247)
T 2jah_A          135 GTVVQMSSIAGRVNV----RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHT----ATKEMYE  206 (247)
T ss_dssp             CEEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCH----HHHHHHH
T ss_pred             CEEEEEccHHhcCCC----CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccch----hhHHHHH
Confidence            58887 665443221    2345667799988766543       589999999999987654321100    000000 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      ..+    .++.+.+.+|+|++++.++.++.
T Consensus       207 ~~~----~~~~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          207 QRI----SQIRKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             HHT----TTSCCBCHHHHHHHHHHHHHSCT
T ss_pred             hcc----cccCCCCHHHHHHHHHHHhCCCc
Confidence            011    11225899999999999998763

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.40  E-value=1.7e-06  Score=71.37  Aligned_cols=145  Identities=12%  Similarity=0.023  Sum_probs=83.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC------
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG------   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g------   53 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+..++++++....      
T Consensus        60 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  139 (319)
T 3ioy_A           60 EVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKA  139 (319)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhc
Confidence            57889999999999888876       5799999998421                   344556666654432      


Q ss_pred             ---CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCC
Q 025054           54 ---NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPP  122 (258)
Q Consensus        54 ---~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~  122 (258)
                         +-.++|. ||..+....    +....|..+|+.++.+.+       ..|+.+++|+||++...+........ ....
T Consensus       140 ~~~~~g~iV~isS~a~~~~~----~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~  214 (319)
T 3ioy_A          140 GEQKGGHVVNTASMAAFLAA----GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRP-DALK  214 (319)
T ss_dssp             TSCCCCEEEEECCGGGTCCC----SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----------------
T ss_pred             cCCCCcEEEEecccccccCC----CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCc-hhhc
Confidence               0346887 765543321    224567779996665443       25899999999999876643211100 0000


Q ss_pred             CCceEe----ccC-CCceeeeeccchHHHHHHHHhcCC
Q 025054          123 RENILF----YGD-GQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       123 ~~~~~~----~g~-g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      ......    ... .......++.+|+|+.++.+++.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          215 GEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             --------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             ccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence            000000    000 001111279999999999999875

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=98.40  E-value=3.4e-07  Score=73.54  Aligned_cols=160  Identities=11%  Similarity=-0.010  Sum_probs=98.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~vk~~v   59 (258)
                      .+..+.+|++|.+++.++++   +.|++||+++...                   +.+    .+.++..+++.+ ..++|
T Consensus        62 ~~~~~~~D~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv  140 (267)
T 3t4x_A           62 ILQPVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVI  140 (267)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEE
T ss_pred             eEEEEecCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEE
Confidence            36778999999998887776   7899999998531                   222    344555556667 78898


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-CC-CCCCCC----Cc
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-PG-ATAPPR----EN  125 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~~-~~~~~~----~~  125 (258)
                      . |+......    .++...|..+|+.++.+.+.       .++.+..|+||.+.......+.. .. ......    ..
T Consensus       141 ~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  216 (267)
T 3t4x_A          141 FIASEAAIMP----SQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKR  216 (267)
T ss_dssp             EECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHH
T ss_pred             EEcchhhccC----CCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHH
Confidence            8 66543322    12345677799999887754       47899999999988753321100 00 000000    00


Q ss_pred             -eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc
Q 025054          126 -ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY  171 (258)
Q Consensus       126 -~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~  171 (258)
                       +.-.........+.+++|+|++++.++.+..  -.|+.+++.| +...
T Consensus       217 ~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG-G~~~  264 (267)
T 3t4x_A          217 FMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDG-GLVR  264 (267)
T ss_dssp             HHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST-TCSC
T ss_pred             HhhccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECC-Cccc
Confidence             0000000011247899999999999988642  2488899886 5343

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=98.40  E-value=6.1e-08  Score=78.43  Aligned_cols=150  Identities=12%  Similarity=0.078  Sum_probs=95.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.+..++++++    ++.+ .
T Consensus        78 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~  156 (277)
T 4fc7_A           78 RCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-G  156 (277)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-C
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            47889999999998888776       7899999998421                   34455666665    3444 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc-CCCCCCCCCCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL-PTMAQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~-~~~~~~~~~~~~~~~~  126 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||++.+... ..+...      ....
T Consensus       157 g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~------~~~~  226 (277)
T 4fc7_A          157 GVIVNITATLGNRGQ----ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP------QASL  226 (277)
T ss_dssp             EEEEEECCSHHHHTC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCC------HHHH
T ss_pred             CEEEEECchhhCCCC----CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCC------HHHH
Confidence            68887 665332211    1244566799999877653       489999999999986421 111000      0000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...........+.+.+|+|++++.++++..  -.|+.+++.|
T Consensus       227 ~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdG  268 (277)
T 4fc7_A          227 STKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADG  268 (277)
T ss_dssp             HHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECC
Confidence            000000111136789999999999998642  3588888876

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.40  E-value=1.2e-07  Score=76.34  Aligned_cols=166  Identities=11%  Similarity=0.105  Sum_probs=98.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHH---hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKE---VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~---~g~v   55 (258)
                      ++.++.+|++|.+++.++++       +.|+|||+++...                    +.+..++++++..   .+ .
T Consensus        55 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~  133 (270)
T 1yde_A           55 GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-Q  133 (270)
T ss_dssp             TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T
T ss_pred             CCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-C
Confidence            47889999999999888776       7899999997421                    3344556666542   22 3


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+++|+||++++.+........ .. ....+.
T Consensus       134 g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~-~~-~~~~~~  207 (270)
T 1yde_A          134 GNVINISSLVGAIGQ----AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM-PD-PRASIR  207 (270)
T ss_dssp             CEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTS-SS-HHHHHH
T ss_pred             CEEEEEcCccccCCC----CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcc-cc-hHHHHH
Confidence            68887 664322111    1245677799999877654       5899999999999886532211000 00 000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcCCCCccCHHHHHHH
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRPPKNIYSFKELVAL  179 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~  179 (258)
                      -.........+.+.+|+|++++.++.+.. -.|+.+.+.| +..+++.+.+..
T Consensus       208 ~~~~~~p~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdG-G~~~~~~~~~~~  259 (270)
T 1yde_A          208 EGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTG-GAELGYGCKASR  259 (270)
T ss_dssp             HHHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEEST-TTTSCC------
T ss_pred             HHhhcCCCCCCcCHHHHHHHHHHHcccCCCcCCCEEEECC-CeecccCcCccc
Confidence            00000000125689999999999887533 2578899987 556665444443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=98.39  E-value=1.2e-07  Score=76.31  Aligned_cols=162  Identities=10%  Similarity=0.046  Sum_probs=98.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhC-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVG-   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g-   53 (258)
                      ++.++.+|++|.+++.++++       +.|++||+++...                        +.+..++++++...- 
T Consensus        65 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  144 (271)
T 3ek2_A           65 SELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLS  144 (271)
T ss_dssp             CCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEE
T ss_pred             CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence            37889999999999888876       6799999997421                        334556666665431 


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      +-.++|. |+......    .+....|..+|+.++.+.+.       .++.++.|+||++...+.......      ...
T Consensus       145 ~~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~  214 (271)
T 3ek2_A          145 DDASLLTLSYLGAERA----IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSF------GKI  214 (271)
T ss_dssp             EEEEEEEEECGGGTSB----CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHH------HHH
T ss_pred             cCceEEEEeccccccC----CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccch------HHH
Confidence            0236776 66543322    12345677799999877653       589999999998887553321000      000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHH
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVA  178 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~  178 (258)
                      ............+.+.+|+|++++.++.+..  ..|+.+++.| +..+++.++++
T Consensus       215 ~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdg-G~~~~~~~~~~  268 (271)
T 3ek2_A          215 LDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDS-GFNAVVGGMAG  268 (271)
T ss_dssp             HHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEEST-TGGGBCCCC--
T ss_pred             HHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECC-Ceeeehhhhhh
Confidence            0000000111236789999999999998642  3588899987 66777666544

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.39  E-value=6.3e-07  Score=72.47  Aligned_cols=154  Identities=9%  Similarity=0.055  Sum_probs=97.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccC-cc-----------c-------------hhchHHHHHHHHHh--
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVG-RT-----------E-------------VEDQFKLIAAIKEV--   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~-~~-----------~-------------~~~~~~li~aa~~~--   52 (258)
                      .+.++.+|++|.+++.++++      +.|++||+++ ..           .             +.+..++++++...  
T Consensus        77 ~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  156 (281)
T 3ppi_A           77 RAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIA  156 (281)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            57889999999999888775      5799999843 21           0             23344555555421  


Q ss_pred             --------CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCC
Q 025054           53 --------GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQP  116 (258)
Q Consensus        53 --------g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~  116 (258)
                              + -.++|. |+.......    +....|..+|+.++.+.+.       .++.++.|+||++...+...+.. 
T Consensus       157 ~~~~~~~~~-~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-  230 (281)
T 3ppi_A          157 AAEPRENGE-RGALVLTASIAGYEGQ----IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGE-  230 (281)
T ss_dssp             TSCCCTTSC-CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCH-
T ss_pred             hhcccccCC-CeEEEEEecccccCCC----CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccH-
Confidence                    2 347887 665443221    2345677799988876643       58999999999988755432110 


Q ss_pred             CCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccC
Q 025054          117 GATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYS  172 (258)
Q Consensus       117 ~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t  172 (258)
                           . ....+...-.....+.+.+|+|++++.+++++...|+.+++.| +..++
T Consensus       231 -----~-~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG-G~~~~  279 (281)
T 3ppi_A          231 -----E-ALAKFAANIPFPKRLGTPDEFADAAAFLLTNGYINGEVMRLDG-AQRFT  279 (281)
T ss_dssp             -----H-HHHHHHHTCCSSSSCBCHHHHHHHHHHHHHCSSCCSCEEEEST-TCCCC
T ss_pred             -----H-HHHHHHhcCCCCCCCCCHHHHHHHHHHHHcCCCcCCcEEEECC-CcccC
Confidence                 0 0000000000112477999999999999987655688899987 54554

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=98.39  E-value=1.8e-07  Score=75.34  Aligned_cols=156  Identities=13%  Similarity=0.152  Sum_probs=96.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      .+..+.+|++|.+++.++++       +.|++||+++...                   +.+...++++    .++.+ .
T Consensus        54 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~  132 (269)
T 3vtz_A           54 VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-H  132 (269)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            45678899999999888776       7899999998531                   2333344444    44566 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCC--CCCCCCC-CCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQ--PGATAPP-REN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~--~~~~~~~-~~~  125 (258)
                      .++|. |+......    .+....|..+|+.++.+.+.      .++.+..|+||++...+......  ....... ...
T Consensus       133 g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  208 (269)
T 3vtz_A          133 GSIINIASVQSYAA----TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERK  208 (269)
T ss_dssp             EEEEEECCGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHH
T ss_pred             CEEEEECchhhccC----CCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHH
Confidence            78887 66543322    12345677799999887754      37999999999998754321100  0000000 000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...+........+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       209 ~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  251 (269)
T 3vtz_A          209 IEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDG  251 (269)
T ss_dssp             HHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECC
Confidence            0011111111236789999999999988653  3588899876

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=98.38  E-value=1.4e-06  Score=70.04  Aligned_cols=150  Identities=15%  Similarity=0.060  Sum_probs=92.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~   58 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++...- .-.++
T Consensus        78 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~i  157 (267)
T 3u5t_A           78 KALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRI  157 (267)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeE
Confidence            47788999999999888776       7899999998531                   344556666665531 02377


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+......    .+....|..+|+.++.+.+.       .|+.+..|+||++...+......       ........
T Consensus       158 v~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~  226 (267)
T 3u5t_A          158 INMSTSQVGLL----HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS-------DEVRDRFA  226 (267)
T ss_dssp             EEECCTHHHHC----CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------------CHHHHH
T ss_pred             EEEeChhhccC----CCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC-------HHHHHHHH
Confidence            77 65432211    12245677799999887754       48999999999987765322100       00000111


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .......+.+++|+|++++.++.+..  -.|+.+.+.|
T Consensus       227 ~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  264 (267)
T 3u5t_A          227 KLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANG  264 (267)
T ss_dssp             TSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESS
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence            11111236789999999999988653  2577888875

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=98.37  E-value=2.4e-06  Score=68.49  Aligned_cols=150  Identities=15%  Similarity=0.094  Sum_probs=95.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +.+..++++++    ++.+ .
T Consensus        74 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~  152 (267)
T 3gdg_A           74 KAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-T  152 (267)
T ss_dssp             CEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             ceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-C
Confidence            47788999999998888776       5799999998531                   33444555555    5666 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      .++|. |+.........  ++...|..+|+.++.+.+.      ..+.+..+.||++...+......        .....
T Consensus       153 g~iv~isS~~~~~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~--------~~~~~  222 (267)
T 3gdg_A          153 GSLVITASMSGHIANFP--QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPK--------ETQQL  222 (267)
T ss_dssp             CEEEEECCGGGTSCCSS--SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCH--------HHHHH
T ss_pred             ceEEEEccccccccCCC--CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCH--------HHHHH
Confidence            78887 66443222110  1245677799999887754      23788999999887655432110        00111


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +........+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       223 ~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdg  262 (267)
T 3gdg_A          223 WHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDG  262 (267)
T ss_dssp             HHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred             HHhcCCCCCCcCHHHHHhHhheeecCccccccCCEEEECC
Confidence            1111122236789999999999997642  3478888875

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.35  E-value=2.8e-06  Score=68.13  Aligned_cols=127  Identities=12%  Similarity=-0.041  Sum_probs=87.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~   58 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+..++++++.... +..++
T Consensus        55 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~i  134 (276)
T 1wma_A           55 SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRV  134 (276)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred             eeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEE
Confidence            47889999999999988877       7899999997431                   445667888887653 02388


Q ss_pred             Ec-CCCCCCC---C----------------------------------CCCCCCCCccchhhHHHHHHHHHh--------
Q 025054           59 FP-TEYGSNV---D----------------------------------AGHPIEPAKSGYARKAKIRRAIEA--------   92 (258)
Q Consensus        59 v~-S~~~~~~---~----------------------------------~~~~~~~~~~~~~~k~~~e~~l~~--------   92 (258)
                      |+ |+.....   .                                  ......|...|..+|..++.+.+.        
T Consensus       135 v~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  214 (276)
T 1wma_A          135 VNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQ  214 (276)
T ss_dssp             EEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcc
Confidence            87 6632210   0                                  000011235677799988876642        


Q ss_pred             ---CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054           93 ---EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus        93 ---~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                         .++.++.|+||++...+...                       ..+.+.+|+|+.++.++..+
T Consensus       215 ~~~~~i~v~~v~PG~v~t~~~~~-----------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          215 RKGDKILLNACCPGWVRTDMAGP-----------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             CTTSCCEEEEEECCSBCSTTTCT-----------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             cCCCceEEEEecCCccccCcCCc-----------------------cccCChhHhhhhHhhhhcCc
Confidence               48999999999876543210                       13679999999999999765

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.35  E-value=9e-07  Score=71.88  Aligned_cols=148  Identities=14%  Similarity=0.148  Sum_probs=95.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                    +.+..++++++    ++.+ 
T Consensus        88 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-  166 (287)
T 3rku_A           88 KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-  166 (287)
T ss_dssp             EEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            47889999999999888776       5799999998421                    33445555555    5566 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ..++|. |+......    .+....|..+|+.++.+.+.       .|+.++.|+||++...+...... .   ......
T Consensus       167 ~g~IV~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~---~~~~~~  238 (287)
T 3rku_A          167 SGDIVNLGSIAGRDA----YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYR-G---NEEQAK  238 (287)
T ss_dssp             CCEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTT-T---CHHHHH
T ss_pred             CCeEEEECChhhcCC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccccccc-C---cHHHHH
Confidence            678887 66543322    12345677799999877653       58999999999988754321000 0   000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g  166 (258)
                      .....    ..+.+.+|+|++++.++.++..  .++.+.+.|
T Consensus       239 ~~~~~----~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~  276 (287)
T 3rku_A          239 NVYKD----TTPLMADDVADLIVYATSRKQNTVIADTLIFPT  276 (287)
T ss_dssp             HHHTT----SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             Hhhcc----cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeC
Confidence            00110    1133899999999999987642  366777764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.34  E-value=4.3e-06  Score=65.46  Aligned_cols=128  Identities=14%  Similarity=0.131  Sum_probs=82.5

Q ss_pred             ceeEEeccCCCHHHHHHhhCCC----cEEEEccCccc-------------------hhchHHHHHHHHH----hCCccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIKPV----DVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~----d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk~~   58 (258)
                      .+.++.+|++|.+++.++++.+    |+|||+++...                   +.+..++++++..    .+ . ++
T Consensus        48 ~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~-~i  125 (230)
T 3guy_A           48 NVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-V-NV  125 (230)
T ss_dssp             CCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-C-EE
T ss_pred             ccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C-eE
Confidence            5788999999999999988765    89999998431                   3344555565544    33 2 77


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+......    .+....|..+|+.++.+.+.       .++.+..|+||.+...+......         ..    
T Consensus       126 v~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~----  188 (230)
T 3guy_A          126 VMIMSTAAQQP----KAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK---------SL----  188 (230)
T ss_dssp             EEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------
T ss_pred             EEEeecccCCC----CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC---------CC----
Confidence            77 66543322    12345677799999877653       48999999999887655332110         01    


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                         ....+.+.+|+|+++..++.++
T Consensus       189 ---~~~~~~~~~dvA~~i~~l~~~~  210 (230)
T 3guy_A          189 ---DTSSFMSAEDAALMIHGALANI  210 (230)
T ss_dssp             -------CCCHHHHHHHHHHHCCEE
T ss_pred             ---CcccCCCHHHHHHHHHHHHhCc
Confidence               1234789999999999998865

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=98.34  E-value=9.9e-07  Score=70.65  Aligned_cols=149  Identities=16%  Similarity=0.097  Sum_probs=90.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~   57 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+...+++++...  + -.+
T Consensus        64 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~  142 (262)
T 3ksu_A           64 KVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-NGH  142 (262)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-EEE
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCE
Confidence            47788999999999888876       6899999998431                   34455666776653  3 357


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +|. |+.......    +....|..+|+.++.+.+.       .++.+..|+||++...+........       .....
T Consensus       143 iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-------~~~~~  211 (262)
T 3ksu_A          143 IITIATSLLAAYT----GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE-------STAFH  211 (262)
T ss_dssp             EEEECCCHHHHHH----CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------
T ss_pred             EEEEechhhccCC----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH-------HHHHH
Confidence            776 554221111    1234577799998877653       4899999999998765432211100       00111


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g  166 (258)
                      ........+.+.+|+|++++.++.+.. -.|+.+++-|
T Consensus       212 ~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdG  249 (262)
T 3ksu_A          212 KSQAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANG  249 (262)
T ss_dssp             ----CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEEST
T ss_pred             HhcCcccCCCCHHHHHHHHHHHcCCCCCccCCEEEECC
Confidence            111111236789999999999988632 2478888876

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=98.34  E-value=2.6e-06  Score=69.59  Aligned_cols=156  Identities=14%  Similarity=0.110  Sum_probs=96.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHH----HhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIK----EVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~----~~g~   54 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                    +.+...+++++.    +.++
T Consensus        90 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~  169 (299)
T 3t7c_A           90 RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR  169 (299)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            47788999999998888775       7899999997421                    333445555543    3222


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-----CCCCCCC
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-----QPGATAP  121 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-----~~~~~~~  121 (258)
                      ..++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||++...+.....     .......
T Consensus       170 ~g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  245 (299)
T 3t7c_A          170 GGSIVFTSSIGGLRGA----ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENP  245 (299)
T ss_dssp             CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSC
T ss_pred             CcEEEEECChhhccCC----CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccc
Confidence            467887 765443221    2345677799999877653       4899999999999876543100     0000000


Q ss_pred             CCCce---EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          122 PRENI---LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       122 ~~~~~---~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .....   ..... ..+..+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       246 ~~~~~~~~~~~~~-~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  294 (299)
T 3t7c_A          246 TVEDFQVASRQMH-VLPIPYVEPADISNAILFLVSDDARYITGVSLPVDG  294 (299)
T ss_dssp             CHHHHHHHHHHHS-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhHHHHHhhhhc-ccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC
Confidence            00000   00000 111347799999999999998653  2488888876

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.34  E-value=1.3e-06  Score=70.61  Aligned_cols=156  Identities=15%  Similarity=0.119  Sum_probs=95.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc----------c-------------hhchHHHHHHHHH----
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT----------E-------------VEDQFKLIAAIKE----   51 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~----------~-------------~~~~~~li~aa~~----   51 (258)
                      ++.++.+|++|++++.++++       +.|+|||+++..          .             +.+..++++++..    
T Consensus        59 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~  138 (280)
T 1xkq_A           59 QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVA  138 (280)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhc
Confidence            57889999999998888776       689999999732          0             2344555555543    


Q ss_pred             hCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC-
Q 025054           52 VGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP-  122 (258)
Q Consensus        52 ~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~-  122 (258)
                      .+  .++|. |+.......   .++...|..+|+.++.+.+.       .|+.+++|+||++.+.+............. 
T Consensus       139 ~~--g~iv~isS~~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~  213 (280)
T 1xkq_A          139 SK--GEIVNVSSIVAGPQA---QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKF  213 (280)
T ss_dssp             HT--CEEEEECCGGGSSSC---CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHH
T ss_pred             CC--CcEEEecCccccCCC---CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccch
Confidence            33  58887 665433221   02344577799999877653       589999999999988654321000000000 


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCC-C--CCCceEEEcC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R--TLNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~--~~~~~~~l~g  166 (258)
                      ...............+.+++|+|++++.++.++ .  ..|+.+++.|
T Consensus       214 ~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdg  260 (280)
T 1xkq_A          214 YNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADG  260 (280)
T ss_dssp             HHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             HHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECC
Confidence            000000000000113679999999999998754 2  3578888876

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.34  E-value=5e-06  Score=67.24  Aligned_cols=137  Identities=12%  Similarity=0.078  Sum_probs=84.7

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhch----HHHHHHHHHhC-C
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQ----FKLIAAIKEVG-N   54 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~----~~li~aa~~~g-~   54 (258)
                      +.++.+|++|++++.++++       +.|++||+++...                    +.+.    +.++...++.+ .
T Consensus        85 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~  164 (281)
T 4dry_A           85 VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPR  164 (281)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence            4789999999998888775       6799999997521                    2233    33334444432 1


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.......    ++...|..+|+.++.+.+.       .++.+..|+||++...+...+.. ... ..... 
T Consensus       165 ~g~IV~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~-~~~~~-  237 (281)
T 4dry_A          165 GGRIINNGSISAQTPR----PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST-GVL-QANGE-  237 (281)
T ss_dssp             CEEEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C-EEE-CTTSC-
T ss_pred             CcEEEEECCHHhCCCC----CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc-hhh-hhhhc-
Confidence            357887 665443221    2345677799999877653       58999999999888765432211 000 00000 


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                            .....+.+.+|+|++++.+++++.
T Consensus       238 ------~~~~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          238 ------VAAEPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             ------EEECCCBCHHHHHHHHHHHHHSCT
T ss_pred             ------ccccCCCCHHHHHHHHHHHhCCCc
Confidence                  111236789999999999999874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.34  E-value=1.2e-06  Score=71.04  Aligned_cols=161  Identities=12%  Similarity=0.100  Sum_probs=98.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------hhchHHHHHHHHHhC-CccEEEc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------VEDQFKLIAAIKEVG-NIKRFFP   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------~~~~~~li~aa~~~g-~vk~~v~   60 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                 +.+..++++++...- +-.++|.
T Consensus        72 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~  151 (287)
T 3pxx_A           72 KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIIT  151 (287)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEE
Confidence            47788999999999888776       7899999998521                 455667777776532 1347777


Q ss_pred             -CCCCCCC-------CCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-----CCCCCC
Q 025054           61 -TEYGSNV-------DAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-----QPGATA  120 (258)
Q Consensus        61 -S~~~~~~-------~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-----~~~~~~  120 (258)
                       |+.....       ......++...|..+|+.++.+.+.       .|+.+..|+||++...+.....     ......
T Consensus       152 isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  231 (287)
T 3pxx_A          152 TGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEA  231 (287)
T ss_dssp             ECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSS
T ss_pred             eccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhcccccc
Confidence             6532110       0000001223466699999877653       4899999999999886543210     000000


Q ss_pred             CCC-C-ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          121 PPR-E-NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       121 ~~~-~-~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ... . ...+......+..+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG  281 (287)
T 3pxx_A          232 PSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDA  281 (287)
T ss_dssp             CCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             chhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECc
Confidence            000 0 00011111222458899999999999987653  2478888876

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.34  E-value=5.4e-07  Score=71.52  Aligned_cols=150  Identities=15%  Similarity=0.072  Sum_probs=94.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..+++++    +++.++.
T Consensus        53 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~  132 (247)
T 3rwb_A           53 KARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKA  132 (247)
T ss_dssp             TEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC
Confidence            47788999999999888876       7899999998531                   2333444444    5555434


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .+....|..+|+.++.+.+.       .++.+..|+||++...+......       .....
T Consensus       133 g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-------~~~~~  201 (247)
T 3rwb_A          133 GRVISIASNTFFAG----TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH-------NEAFG  201 (247)
T ss_dssp             EEEEEECCTHHHHT----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGG-------GGGHH
T ss_pred             cEEEEECchhhccC----CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccCh-------hHHHH
Confidence            68887 66432211    12245677799988876653       58999999999988754322110       00000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +.........+.+.+|+|+++..++.+..  -.|+.+++.|
T Consensus       202 ~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG  242 (247)
T 3rwb_A          202 FVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDA  242 (247)
T ss_dssp             HHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            00000001125688999999999988753  2478888875

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=98.31  E-value=6.1e-06  Score=65.98  Aligned_cols=136  Identities=9%  Similarity=-0.002  Sum_probs=89.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC---------CCcEEEEccCccc--------------------hhchHHHHHHHHHh----
Q 025054            6 NCLIAQGDLHDHESLVKAIK---------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEV----   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~---------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~----   52 (258)
                      ++.++.+|++|.+++.++++         ++|+|||+++...                    +.+..++++++...    
T Consensus        73 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  152 (267)
T 1sny_A           73 NIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKA  152 (267)
T ss_dssp             TEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhc
Confidence            58899999999999988887         7999999997421                    33445555555432    


Q ss_pred             ------CC----ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC
Q 025054           53 ------GN----IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA  114 (258)
Q Consensus        53 ------g~----vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~  114 (258)
                            +.    ..++|. |+........ ...+...|..+|+.++.+.+.       .++.+++|+||++...+...  
T Consensus       153 ~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--  229 (267)
T 1sny_A          153 AKANESQPMGVGRAAIINMSSILGSIQGN-TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--  229 (267)
T ss_dssp             HHHTTTSCSSTTTCEEEEECCGGGCSTTC-CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--
T ss_pred             ccccccccccCCCceEEEEecccccccCC-CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--
Confidence                  10    257887 6654322211 112345677799999877653       58999999999876543210  


Q ss_pred             CCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEc
Q 025054          115 QPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLR  165 (258)
Q Consensus       115 ~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~  165 (258)
                                           ..+.+.+|+|+.++.++..+ .. .|..+.+-
T Consensus       230 ---------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~  261 (267)
T 1sny_A          230 ---------------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYD  261 (267)
T ss_dssp             ---------------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTT
T ss_pred             ---------------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccC
Confidence                                 02467899999999998764 22 34444443

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=98.31  E-value=1.7e-06  Score=68.80  Aligned_cols=150  Identities=10%  Similarity=0.030  Sum_probs=95.3

Q ss_pred             ceeEEeccCCCHHHHHHhhCC-------------CcEEEEccCccc-------------------hhchHHHHHHHHHh-
Q 025054            6 NCLIAQGDLHDHESLVKAIKP-------------VDVVISAVGRTE-------------------VEDQFKLIAAIKEV-   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g-------------~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~-   52 (258)
                      .+.++.+|++|.+++.++++.             .|++||+++...                   +.+..++++++... 
T Consensus        58 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  137 (255)
T 3icc_A           58 SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRL  137 (255)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE
T ss_pred             ceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhh
Confidence            367788999999888777652             899999998531                   33445666666543 


Q ss_pred             -CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           53 -GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        53 -g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                       + -.++|. |+.......    +....|..+|+.++.+.+.       .++.++.++||++...+......      ..
T Consensus       138 ~~-~~~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~  206 (255)
T 3icc_A          138 RD-NSRIINISSAATRISL----PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS------DP  206 (255)
T ss_dssp             EE-EEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT------SH
T ss_pred             CC-CCEEEEeCChhhccCC----CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc------cH
Confidence             2 347887 665443221    2244566799999877643       58999999999988765433211      00


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..............+.+++|+|++++.++.+..  -.|+.+++.|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          207 MMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             HHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecC
Confidence            000011111111236789999999999887642  3578888876

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.31  E-value=1.6e-06  Score=69.54  Aligned_cols=151  Identities=9%  Similarity=0.050  Sum_probs=96.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhC-C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVG-N   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g-~   54 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                       +.+..++++++...- +
T Consensus        60 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  139 (266)
T 3oig_A           60 DSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE  139 (266)
T ss_dssp             CCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT
T ss_pred             CceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC
Confidence            58899999999998888775       6899999987421                       233455666665542 0


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.......    +....|..+|+.++.+.+.       .|+.++.|+||++...+.......      ....
T Consensus       140 ~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~  209 (266)
T 3oig_A          140 GGSIVTLTYLGGELVM----PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDF------NSIL  209 (266)
T ss_dssp             CEEEEEEECGGGTSCC----TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH------HHHH
T ss_pred             CceEEEEecccccccC----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccch------HHHH
Confidence            237777 665433221    2345667799999877653       589999999999887554321110      0000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...........+.+.+|+|+++..++.++.  ..|+.+++.|
T Consensus       210 ~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdG  251 (266)
T 3oig_A          210 KDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDS  251 (266)
T ss_dssp             HHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECC
Confidence            000000011135789999999999998652  3578888876

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.30  E-value=4.7e-07  Score=72.25  Aligned_cols=161  Identities=12%  Similarity=0.008  Sum_probs=98.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~   58 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++...- +-.++
T Consensus        55 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~i  134 (255)
T 4eso_A           55 RVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSI  134 (255)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred             cceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEE
Confidence            57889999999998876654       6899999997531                   344556677765431 02367


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc-eEec
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN-ILFY  129 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  129 (258)
                      |. |+......    .++...|..+|+.++.+.+.       .|+.+..|+||++...+......   ....... ....
T Consensus       135 v~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~  207 (255)
T 4eso_A          135 VFTSSVADEGG----HPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGI---TEAERAEFKTLG  207 (255)
T ss_dssp             EEECCGGGSSB----CTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTS---CHHHHHHHHHHH
T ss_pred             EEECChhhcCC----CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccC---ChhhHHHHHHHH
Confidence            87 66543322    12345667799999877653       48999999999988765322100   0000000 0000


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcCCCCccCHH
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRPPKNIYSFK  174 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g~~~~~t~~  174 (258)
                      ........+.+++|+|++++.++.+.. -.|+.+++.| +...++.
T Consensus       208 ~~~~p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdG-G~~~~l~  252 (255)
T 4eso_A          208 DNITPMKRNGTADEVARAVLFLAFEATFTTGAKLAVDG-GLGQKLS  252 (255)
T ss_dssp             HHHSTTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEEST-TTTTTBC
T ss_pred             hccCCCCCCcCHHHHHHHHHHHcCcCcCccCCEEEECC-CccccCc
Confidence            000011125689999999999887632 3578898886 5455443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.30  E-value=1.6e-06  Score=70.57  Aligned_cols=151  Identities=11%  Similarity=0.085  Sum_probs=94.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhC-C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVG-N   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g-~   54 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                       +.+..++++++...- +
T Consensus        82 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~  161 (293)
T 3grk_A           82 AFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD  161 (293)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT
T ss_pred             CceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            47788999999999888776       6899999998421                       344566777776532 0


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||++...+.......      ....
T Consensus       162 ~g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~  231 (293)
T 3grk_A          162 GGSILTLTYYGAEKVM----PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDF------RYIL  231 (293)
T ss_dssp             CEEEEEEECGGGTSBC----TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCH------HHHH
T ss_pred             CCEEEEEeehhhccCC----CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccch------HHHH
Confidence            247887 665433221    2345677799999877653       589999999999887543321100      0000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...........+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       232 ~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  273 (293)
T 3grk_A          232 KWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADS  273 (293)
T ss_dssp             HHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECC
Confidence            000000001125689999999999988642  3578888876

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.30  E-value=3.6e-06  Score=66.21  Aligned_cols=127  Identities=17%  Similarity=0.139  Sum_probs=83.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      ++.++.+|++|.+++.++++       +.|++||+++...                   +.+...+++++    ++.+ -
T Consensus        50 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~  128 (235)
T 3l6e_A           50 AVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-G  128 (235)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-E
T ss_pred             CceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            57889999999998888776       6799999998531                   33444455554    3344 2


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                       ++|. |+.......    +....|..+|+.++.+.+.       .|+.++.|+||++...+.....          .  
T Consensus       129 -~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~----------~--  191 (235)
T 3l6e_A          129 -VLANVLSSAAQVGK----ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD----------H--  191 (235)
T ss_dssp             -EEEEECCEECCSSC----SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------
T ss_pred             -EEEEEeCHHhcCCC----CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC----------C--
Confidence             7776 665433221    1234566799999877653       5799999999988665432210          0  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                           .....+.+.+|+|++++.+++++
T Consensus       192 -----~~~~~~~~pedvA~~v~~l~~~~  214 (235)
T 3l6e_A          192 -----VDPSGFMTPEDAAAYMLDALEAR  214 (235)
T ss_dssp             ----------CBCHHHHHHHHHHHTCCC
T ss_pred             -----CCCcCCCCHHHHHHHHHHHHhCC
Confidence                 00114789999999999999865

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=98.29  E-value=9.8e-06  Score=65.30  Aligned_cols=154  Identities=16%  Similarity=0.061  Sum_probs=95.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.+..+++++    .++.++-
T Consensus        74 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~  153 (277)
T 3tsc_A           74 RIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRG  153 (277)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC
Confidence            47788999999998888775       5899999998531                   2333445554    3444313


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-----CCCCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-----AQPGATAPP  122 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-----~~~~~~~~~  122 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .++.+..|+||++...+....     .........
T Consensus       154 g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  229 (277)
T 3tsc_A          154 GSIILISSAAGMKMQ----PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQ  229 (277)
T ss_dssp             EEEEEECCGGGTSCC----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGG
T ss_pred             CEEEEEccHhhCCCC----CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHH
Confidence            57887 665443221    2345677799999877653       589999999999987653210     000000000


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                        ....... ..+..+.+.+|+|++++.++.++.  -.|+.+++.|
T Consensus       230 --~~~~~~~-~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  272 (277)
T 3tsc_A          230 --LSHVLTP-FLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQ  272 (277)
T ss_dssp             --GTTTTCC-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             --HHHHhhh-ccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCC
Confidence              0000111 111237799999999999998753  3478888876

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.28  E-value=1.5e-06  Score=70.92  Aligned_cols=154  Identities=14%  Similarity=0.075  Sum_probs=97.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhC-C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVG-N   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g-~   54 (258)
                      ++.++.+|++|.+++.++++       +.|++||+++...                       +.+..++++++...- +
T Consensus        81 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  160 (296)
T 3k31_A           81 VKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN  160 (296)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT
T ss_pred             CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            36788999999999888775       6799999997421                       344566677765532 0


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.......    +....|..+|+.++.+.+.       .++.+..|+||++...+.......     . ...
T Consensus       161 ~g~IV~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-----~-~~~  230 (296)
T 3k31_A          161 GGSILTLSYYGAEKVV----PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDF-----H-YIL  230 (296)
T ss_dssp             CEEEEEEECGGGTSCC----TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHH-----H-HHH
T ss_pred             CCEEEEEEehhhccCC----CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccch-----H-HHH
Confidence            237887 665443221    2345677799999877653       589999999999887553221000     0 000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCc
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNI  170 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~  170 (258)
                      ...........+.+.+|+|++++.++.+..  -.|+.+++.| +..
T Consensus       231 ~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG-G~~  275 (296)
T 3k31_A          231 TWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDC-GYH  275 (296)
T ss_dssp             HHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST-TGG
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECC-Ccc
Confidence            000000000125688999999999998642  3478888876 533

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=98.26  E-value=5.2e-06  Score=65.94  Aligned_cols=131  Identities=13%  Similarity=0.052  Sum_probs=86.8

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhchHHHHHHH----HHhCCc
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~~~~li~aa----~~~g~v   55 (258)
                      ..+.++.+|++|.+++.++++       +.|++||+++...                  +.+...+++++    ++.+ .
T Consensus        59 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~  137 (250)
T 3nyw_A           59 QEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-N  137 (250)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence            457889999999998888775       6899999998521                  23334445544    5566 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    .+...|..+|+.++.+.+.       .|+.+..|+||++...+......         .  
T Consensus       138 g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---------~--  202 (250)
T 3nyw_A          138 GYIFNVASRAAKYGF----ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT---------P--  202 (250)
T ss_dssp             EEEEEECC-----------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC---------C--
T ss_pred             eEEEEEccHHhcCCC----CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC---------C--
Confidence            78887 665443211    1245677799998877653       48999999999987754332110         0  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                           .....+++.+|+|+++..++.++.
T Consensus       203 -----~~~~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          203 -----FKDEEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             -----SCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             -----cccccCCCHHHHHHHHHHHHcCCC
Confidence                 001236789999999999998763

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=98.24  E-value=3e-06  Score=67.03  Aligned_cols=141  Identities=16%  Similarity=0.092  Sum_probs=76.4

Q ss_pred             CceeEEeccCCCHHHH---HHh---hCCCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054            5 INCLIAQGDLHDHESL---VKA---IKPVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI   55 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l---~~a---l~g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v   55 (258)
                      .++.++.+|+.+.++.   .+.   +.++|+|||+++...                   +.+...++++    .++.+  
T Consensus        48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--  125 (245)
T 3e9n_A           48 EGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--  125 (245)
T ss_dssp             TTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--
T ss_pred             cCCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--
Confidence            3578888898776431   122   236899999998531                   2232333443    34444  


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+......    .+....|..+|+.++.+.+.       .++.++.++||.+...+.......     .     
T Consensus       126 g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~-----  191 (245)
T 3e9n_A          126 GCVIYINSGAGNGP----HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS-----Q-----  191 (245)
T ss_dssp             CEEEEEC--------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------
T ss_pred             CeEEEEcCcccccC----CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh-----h-----
Confidence            46776 65443322    12345677799999877753       589999999999988654332110     0     


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEE
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYL  164 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l  164 (258)
                        +.......+++++|+|+++..+++.+. .+..+++
T Consensus       192 --~~~~~~~~~~~p~dvA~~i~~l~~~~~-~~~~~~i  225 (245)
T 3e9n_A          192 --GTNFRPEIYIEPKEIANAIRFVIDAGE-TTQITNV  225 (245)
T ss_dssp             ------CCGGGSCHHHHHHHHHHHHTSCT-TEEEEEE
T ss_pred             --hcccccccCCCHHHHHHHHHHHHcCCC-ccceeee
Confidence              000111236789999999999998764 4555555

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=98.24  E-value=2e-06  Score=69.58  Aligned_cols=150  Identities=9%  Similarity=0.048  Sum_probs=96.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHh--
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEV--   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~--   52 (258)
                      ++.++.+|++|.+++.++++       +.|+|||+++...                        +....++++++...  
T Consensus        76 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  155 (280)
T 3nrc_A           76 PAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMK  155 (280)
T ss_dssp             CSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            47889999999998888775       5799999997421                        33445666666542  


Q ss_pred             -CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054           53 -GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR  123 (258)
Q Consensus        53 -g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~  123 (258)
                       . ..++|. |+......    .+....|..+|+.++.+.+.       .++.+..|+||.+...+.......      .
T Consensus       156 ~~-~g~iv~isS~~~~~~----~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~  224 (280)
T 3nrc_A          156 NR-NASMVALTYIGAEKA----MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF------K  224 (280)
T ss_dssp             TT-TCEEEEEECGGGTSC----CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH------H
T ss_pred             cC-CCeEEEEeccccccC----CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch------H
Confidence             2 357887 66543322    12345677799999877653       589999999999987654332110      0


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..............+.+.+|+|+++..++.+..  ..|+.+++.|
T Consensus       225 ~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdg  269 (280)
T 3nrc_A          225 KMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDA  269 (280)
T ss_dssp             HHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECC
Confidence            000000000011236789999999999988642  3588888876

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.22  E-value=1.1e-06  Score=70.47  Aligned_cols=148  Identities=11%  Similarity=0.050  Sum_probs=95.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~   58 (258)
                      ++.++.+|++|.+++.++++       +.|++||+++...                   +.+..++++++...- +..++
T Consensus        53 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~i  132 (263)
T 2a4k_A           53 EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSL  132 (263)
T ss_dssp             SEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEE
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEE
Confidence            57889999999998888776       5799999997421                   345566777776531 03578


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+.... ..    +....|..+|+.++.+.+.       .|+.+++|+||++...+...+..      .. ...+..
T Consensus       133 v~isS~~~~-~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~-~~~~~~  200 (263)
T 2a4k_A          133 VLTGSVAGL-GA----FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP------WA-WEQEVG  200 (263)
T ss_dssp             EEECCCTTC-CH----HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH------HH-HHHHHH
T ss_pred             EEEecchhc-CC----CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCH------HH-HHHHHh
Confidence            87 665443 11    1234566688887766543       58999999999998865432100      00 000000


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       ......+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       201 -~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdg  237 (263)
T 2a4k_A          201 -ASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDG  237 (263)
T ss_dssp             -TSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -cCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence             0001136789999999999987653  3478888876

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.19  E-value=2.8e-06  Score=67.56  Aligned_cols=138  Identities=11%  Similarity=-0.058  Sum_probs=92.4

Q ss_pred             eEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c-------------hhchHHHHHHHHHhCCc--cEE
Q 025054            8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E-------------VEDQFKLIAAIKEVGNI--KRF   58 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~-------------~~~~~~li~aa~~~g~v--k~~   58 (258)
                      ..+..|++|.+++.++++       +.|+|||+++..       .             +.+..++++++...- .  .++
T Consensus        62 ~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~i  140 (251)
T 3orf_A           62 HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLL-NQGGLF  140 (251)
T ss_dssp             EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE-EEEEEE
T ss_pred             cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhh-ccCCEE
Confidence            345678999988887765       469999999842       1             345567777776643 2  378


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      |. |+......    .++...|..+|+.++.+.+.         .++.++.|+||++...+......             
T Consensus       141 v~isS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~-------------  203 (251)
T 3orf_A          141 VLTGASAALNR----TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS-------------  203 (251)
T ss_dssp             EEECCGGGGSC----CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT-------------
T ss_pred             EEEechhhccC----CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc-------------
Confidence            87 66544322    12345677799999987753         46889999999887754322110             


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcC-C--CCCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDD-P--RTLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~-~--~~~~~~~~l~g  166 (258)
                         ......+++.+|+|+++..++.+ .  ...|+.+++.+
T Consensus       204 ---~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~  241 (251)
T 3orf_A          204 ---DANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFET  241 (251)
T ss_dssp             ---TSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred             ---cccccccCCHHHHHHHHHHHhcCccccCCcceEEEEec
Confidence               01112367899999999999988 3  23577888764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.18  E-value=3.2e-06  Score=67.25  Aligned_cols=137  Identities=13%  Similarity=0.030  Sum_probs=79.6

Q ss_pred             CCCcEEEEccCcc-c-------------------hhchHHHHHHH----HHhCCccEEEc-CCCCCCCCCCCCCCCCccc
Q 025054           25 KPVDVVISAVGRT-E-------------------VEDQFKLIAAI----KEVGNIKRFFP-TEYGSNVDAGHPIEPAKSG   79 (258)
Q Consensus        25 ~g~d~Vi~~~~~~-~-------------------~~~~~~li~aa----~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~   79 (258)
                      .+.|+|||+++.. .                   +.+..++++++    ++.+ ..++|. |+.......    +....|
T Consensus        71 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----~~~~~Y  145 (254)
T 1zmt_A           71 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPW----KELSTY  145 (254)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCC----TTCHHH
T ss_pred             CCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCC----CCchHH
Confidence            4789999999754 1                   22333444444    4566 678998 665443221    234567


Q ss_pred             hhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHh
Q 025054           80 YARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAV  152 (258)
Q Consensus        80 ~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l  152 (258)
                      ..+|+.++.+.+.       .++.+++|+||++++.....+........................+.+.+|+|++++.++
T Consensus       146 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~  225 (254)
T 1zmt_A          146 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLA  225 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHh
Confidence            7799999877653       489999999999976543221100000000000000000000012678999999999998


Q ss_pred             cCCC--CCCceEEEcC
Q 025054          153 DDPR--TLNKTLYLRP  166 (258)
Q Consensus       153 ~~~~--~~~~~~~l~g  166 (258)
                      .++.  ..|+.+.+.|
T Consensus       226 s~~~~~~tG~~~~vdg  241 (254)
T 1zmt_A          226 SGSCDYLTGQVFWLAG  241 (254)
T ss_dssp             TTSCGGGTTCEEEEST
T ss_pred             CcccCCccCCEEEECC
Confidence            8753  3578888875

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=98.15  E-value=1.5e-05  Score=64.52  Aligned_cols=132  Identities=11%  Similarity=0.089  Sum_probs=85.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+..++++++..    .+ .
T Consensus        66 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~  144 (285)
T 3sc4_A           66 QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-N  144 (285)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-S
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            47889999999999888776       7899999998531                   3444556666543    34 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc-cCcCCCCCCCCCCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG-FFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~-~~~~~~~~~~~~~~~~~~~  126 (258)
                      .++|. |+........   ++...|..+|+.++.+.+.       .|+.+..|+||++.. .+......           
T Consensus       145 g~iv~isS~~~~~~~~---~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~-----------  210 (285)
T 3sc4_A          145 PHILTLSPPIRLEPKW---LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLG-----------  210 (285)
T ss_dssp             CEEEECCCCCCCSGGG---SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHT-----------
T ss_pred             cEEEEECChhhccCCC---CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhcc-----------
Confidence            68887 6644332210   1235677799999877653       589999999995433 22111000           


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                          .......+.+.+|+|+++..++.++.
T Consensus       211 ----~~~~~~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          211 ----GDEAMARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             ----SCCCCTTCBCTHHHHHHHHHHHTSCT
T ss_pred             ----ccccccCCCCHHHHHHHHHHHhCCcc
Confidence                00001125688999999999998763

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.15  E-value=4.6e-06  Score=65.54  Aligned_cols=140  Identities=9%  Similarity=-0.081  Sum_probs=89.6

Q ss_pred             eeEEeccCCCHHHHHHhhC---------CCcEEEEccCcc-------c-------------hhchHHHHHHHHHhC-Ccc
Q 025054            7 CLIAQGDLHDHESLVKAIK---------PVDVVISAVGRT-------E-------------VEDQFKLIAAIKEVG-NIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~---------g~d~Vi~~~~~~-------~-------------~~~~~~li~aa~~~g-~vk   56 (258)
                      +.++.+|++|.+++.++++         +.|+|||+++..       .             +.+..++++++...- +-.
T Consensus        44 ~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g  123 (236)
T 1ooe_A           44 NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGG  123 (236)
T ss_dssp             EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred             cEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCC
Confidence            4566789999988887765         689999999842       1             334456667766532 024


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ++|. |+......    .++...|..+|+.++.+.+.         .++.++.|+||++...+......      .    
T Consensus       124 ~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~------~----  189 (236)
T 1ooe_A          124 LLQLTGAAAAMGP----TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP------N----  189 (236)
T ss_dssp             EEEEECCGGGGSC----CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST------T----
T ss_pred             EEEEECchhhccC----CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC------C----
Confidence            7887 66544322    12344566799999877753         25899999999888765332100      0    


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC---CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR---TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~---~~~~~~~l~g  166 (258)
                            .....+++.+|+|++++..+.++.   ..|+.+.+.|
T Consensus       190 ------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~g  226 (236)
T 1ooe_A          190 ------ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITT  226 (236)
T ss_dssp             ------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred             ------ccccccCCHHHHHHHHHHHHcCCCcccccccEEEEec
Confidence                  001134677999999997774432   2477777764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=98.14  E-value=3.3e-06  Score=68.01  Aligned_cols=150  Identities=13%  Similarity=0.069  Sum_probs=94.8

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc----------c-------------hhchHHHHHHHHHhC-Cc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT----------E-------------VEDQFKLIAAIKEVG-NI   55 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~----------~-------------~~~~~~li~aa~~~g-~v   55 (258)
                      +.++.+|++|++++.++++       +.|++||+++..          .             +.+..++++++...- +-
T Consensus        58 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  137 (275)
T 2pd4_A           58 PYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG  137 (275)
T ss_dssp             CCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred             cEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence            7889999999998888776       679999999742          1             345567777776541 01


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.+....    .++...|..+|+.++.+.+.       .|+.++.|+||++...+.......     . ....
T Consensus       138 g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----~-~~~~  207 (275)
T 2pd4_A          138 ASVLTLSYLGSTKY----MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF-----R-MILK  207 (275)
T ss_dssp             EEEEEEECGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH-----H-HHHH
T ss_pred             CEEEEEecchhcCC----CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcccc-----H-HHHH
Confidence            47887 66443321    12344577799999877653       489999999999987654321100     0 0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........+.+.+|+|++++.++.+..  ..|+.+++.|
T Consensus       208 ~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdg  248 (275)
T 2pd4_A          208 WNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDA  248 (275)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            00000000125689999999999987642  2577788875

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=98.14  E-value=9.1e-06  Score=65.80  Aligned_cols=129  Identities=12%  Similarity=-0.000  Sum_probs=84.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEc-cCccc------------------hhchHHHHHHHHHh---CCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISA-VGRTE------------------VEDQFKLIAAIKEV---GNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~-~~~~~------------------~~~~~~li~aa~~~---g~vk   56 (258)
                      .+.++.+|++|.+++.++++       ++|+|||+ ++...                  +.+..++++++...   + ..
T Consensus        79 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g  157 (286)
T 1xu9_A           79 SAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NG  157 (286)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TC
T ss_pred             ceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CC
Confidence            47889999999998887765       78999999 44311                  23445555555432   2 35


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ++|. |+......    .++...|..+|+.++.+.+         ..++.+++++||++...+.....       .    
T Consensus       158 ~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-------~----  222 (286)
T 1xu9_A          158 SIVVVSSLAGKVA----YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV-------S----  222 (286)
T ss_dssp             EEEEEEEGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS-------C----
T ss_pred             EEEEECCcccccC----CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhc-------c----
Confidence            8887 66543221    1234567779999876653         24899999999988765432100       0    


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                           +.....+++.+|+|+.++.++..+
T Consensus       223 -----~~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          223 -----GIVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             -----GGGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             -----ccccCCCCCHHHHHHHHHHHHhcC
Confidence                 011234678999999999998765

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=98.13  E-value=5.6e-06  Score=71.55  Aligned_cols=149  Identities=12%  Similarity=0.037  Sum_probs=94.4

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------C-CcEEEEccCccc-------------------hhchHHHHHHHHHh----C
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------P-VDVVISAVGRTE-------------------VEDQFKLIAAIKEV----G   53 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g-~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~----g   53 (258)
                      .+++++.+|++|.+++.++++       + .|+|||+++...                   +.+..++.+++...    +
T Consensus       259 ~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~  338 (454)
T 3u0b_A          259 VGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE  338 (454)
T ss_dssp             HTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT
T ss_pred             cCCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Confidence            367889999999988887765       4 899999998532                   45667788887765    4


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       ..+||. ||.......    +....|..+|+.++.+.+.       .|+.++.|.||++...+...+...      ...
T Consensus       339 -~g~iV~iSS~a~~~g~----~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~  407 (454)
T 3u0b_A          339 -GGRVIGLSSMAGIAGN----RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA------TRE  407 (454)
T ss_dssp             -TCEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------------CH
T ss_pred             -CCEEEEEeChHhCCCC----CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh------hHH
Confidence             568887 764332111    1245677799977765542       589999999999877654322110      000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..  ........+...+|+|+++..++.+..  -.|+.+++.|
T Consensus       408 ~~--~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdG  448 (454)
T 3u0b_A          408 VG--RRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCG  448 (454)
T ss_dssp             HH--HHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESS
T ss_pred             HH--HhhccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECC
Confidence            00  000001124578999999999987642  3578888876

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=98.11  E-value=1.8e-06  Score=69.72  Aligned_cols=152  Identities=11%  Similarity=0.043  Sum_probs=94.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk   56 (258)
                      .+..+.+|++|.+++.++++      +.|++||+++...                   +.+..++++++    ++.+ ..
T Consensus        83 ~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g  161 (275)
T 4imr_A           83 TAQELAGDLSEAGAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WG  161 (275)
T ss_dssp             CEEEEECCTTSTTHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             eEEEEEecCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-Cc
Confidence            47889999999988887775      7899999998521                   23344455554    5566 67


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+......    .++...|..+|+.++.+.+.       .++.+..|+||++...+........   ... ...+
T Consensus       162 ~Iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~-~~~~  233 (275)
T 4imr_A          162 RVVSIGSINQLRP----KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQD---PEG-WDEY  233 (275)
T ss_dssp             EEEEECCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHC---HHH-HHHH
T ss_pred             EEEEECCHHhCCC----CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccC---hHH-HHHH
Confidence            8887 66544321    12234477799999877653       4899999999998875432110000   000 0000


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...-....-+.+.+|+|++++.++.+..  -.|+.+.+.|
T Consensus       234 ~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          234 VRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             HHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence            0000000125689999999999988653  2477888865

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=98.08  E-value=2.5e-05  Score=62.83  Aligned_cols=130  Identities=12%  Similarity=0.073  Sum_probs=82.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|++++.++++       +.|++||+++...                   +.+...+++++    ++.+ .
T Consensus        63 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~  141 (274)
T 3e03_A           63 QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-N  141 (274)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-S
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-C
Confidence            46789999999998888765       7899999998531                   23334455544    4455 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc-cCcCCCCCCCCCCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG-FFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~-~~~~~~~~~~~~~~~~~~~  126 (258)
                      .++|. |+........  .+....|..+|+.++.+.+.       .|+.+..|+||++.. .+....        .    
T Consensus       142 g~iv~isS~~~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~--------~----  207 (274)
T 3e03_A          142 PHILTLAPPPSLNPAW--WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML--------P----  207 (274)
T ss_dssp             CEEEECCCCCCCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------
T ss_pred             ceEEEECChHhcCCCC--CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc--------c----
Confidence            78887 6654322100  01234567799999877653       589999999996443 222110        0    


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                         +  .....+.+.+|+|++++.++.+.
T Consensus       208 ---~--~~~~~~~~pedvA~~v~~l~s~~  231 (274)
T 3e03_A          208 ---G--VDAAACRRPEIMADAAHAVLTRE  231 (274)
T ss_dssp             ---C--CCGGGSBCTHHHHHHHHHHHTSC
T ss_pred             ---c--ccccccCCHHHHHHHHHHHhCcc
Confidence               0  01112668999999999999875

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=98.07  E-value=2.2e-05  Score=64.88  Aligned_cols=146  Identities=10%  Similarity=0.002  Sum_probs=92.8

Q ss_pred             ceeEEeccCCCHH-----------------HHHHhhC-------CCcEEEEccCccc-----------------------
Q 025054            6 NCLIAQGDLHDHE-----------------SLVKAIK-------PVDVVISAVGRTE-----------------------   38 (258)
Q Consensus         6 gv~~~~~D~~d~~-----------------~l~~al~-------g~d~Vi~~~~~~~-----------------------   38 (258)
                      .+.++.+|++|.+                 ++.++++       +.|+|||+++...                       
T Consensus        98 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~  177 (328)
T 2qhx_A           98 SAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAME  177 (328)
T ss_dssp             CEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHH
T ss_pred             eEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccH
Confidence            4788999999988                 8877765       7899999997421                       


Q ss_pred             ----------hhchHHHHHHHH----HhCC-----ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------
Q 025054           39 ----------VEDQFKLIAAIK----EVGN-----IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------   92 (258)
Q Consensus        39 ----------~~~~~~li~aa~----~~g~-----vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------   92 (258)
                                +.+...+++++.    +.+.     ..++|. |+......    .+....|..+|+.++.+.+.      
T Consensus       178 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~----~~~~~~Y~asKaal~~l~~~la~el~  253 (328)
T 2qhx_A          178 TATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP----LLGYTIYTMAKGALEGLTRSAALELA  253 (328)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC----CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC----CCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence                      122334445443    3220     357887 66544322    12345677799999877653      


Q ss_pred             -CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCcee--eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054           93 -EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKA--IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus        93 -~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~--~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .++.++.|+||++...+ ..+.  ..    ...  +..  ..+.  .+.+.+|+|++++.++.+..  ..|+.+.+.|
T Consensus       254 ~~gIrvn~v~PG~v~T~~-~~~~--~~----~~~--~~~--~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  321 (328)
T 2qhx_A          254 PLQIRVNGVGPGLSVLVD-DMPP--AV----WEG--HRS--KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  321 (328)
T ss_dssp             GGTEEEEEEEESSBSCCC-CSCH--HH----HHH--HHT--TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcCcEEEEEecCcccCCc-cccH--HH----HHH--HHh--hCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence             48999999999988765 2210  00    000  000  0111  26789999999999987542  3478888876

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=98.07  E-value=1.1e-05  Score=64.49  Aligned_cols=156  Identities=7%  Similarity=-0.022  Sum_probs=94.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                   +.+..++++++.    +.+ -
T Consensus        60 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~  138 (265)
T 3lf2_A           60 RLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-D  138 (265)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-T
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-C
Confidence            37889999999998887765       6899999998531                   334445555553    344 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC-CCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA-TAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~~~~~  126 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|+||++............. ........
T Consensus       139 g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  214 (265)
T 3lf2_A          139 AAIVCVNSLLASQPE----PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQW  214 (265)
T ss_dssp             EEEEEEEEGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHH
T ss_pred             eEEEEECCcccCCCC----CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHH
Confidence            67887 554333221    2245666799999877653       48999999999988754322110000 00000000


Q ss_pred             -EeccC--CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 -LFYGD--GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 -~~~g~--g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .....  ......+.+.+|+|++++.++.+..  -.|+.+++.|
T Consensus       215 ~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  259 (265)
T 3lf2_A          215 TAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSG  259 (265)
T ss_dssp             HHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESS
T ss_pred             HHHHhhccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECC
Confidence             00000  0001126789999999999987642  2477888875

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=98.07  E-value=1.5e-05  Score=65.96  Aligned_cols=101  Identities=21%  Similarity=0.225  Sum_probs=70.9

Q ss_pred             CceeEEeccCCCHHHHHHhhCC-----CcEEEEccCccc-------------------hhchHHHHHHH----HHhCCcc
Q 025054            5 INCLIAQGDLHDHESLVKAIKP-----VDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIK   56 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g-----~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk   56 (258)
                      .++.++.+|++|.+++.++++.     .|++||+++...                   +.+..++++++    ++.+ ..
T Consensus        57 ~~~~~~~~Dv~d~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g  135 (327)
T 1jtv_A           57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SG  135 (327)
T ss_dssp             TSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             CceEEEEecCCCHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CC
Confidence            3578899999999999998874     899999997421                   33445555554    5567 78


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL  110 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~  110 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.       .++.+++|+||++...+.
T Consensus       136 ~IV~isS~~~~~~~----~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~  193 (327)
T 1jtv_A          136 RVLVTGSVGGLMGL----PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (327)
T ss_dssp             EEEEEEEGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             EEEEECCcccccCC----CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence            9998 665433221    1234567799999877653       589999999999887654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=98.06  E-value=9.7e-06  Score=63.92  Aligned_cols=140  Identities=6%  Similarity=-0.124  Sum_probs=90.7

Q ss_pred             eeEEeccCCCHHHHHHhhC---------CCcEEEEccCcc-------c-------------hhchHHHHHHHHHhC-Ccc
Q 025054            7 CLIAQGDLHDHESLVKAIK---------PVDVVISAVGRT-------E-------------VEDQFKLIAAIKEVG-NIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~---------g~d~Vi~~~~~~-------~-------------~~~~~~li~aa~~~g-~vk   56 (258)
                      +.++.+|++|++++.++++         +.|+|||+++..       .             +.+...+++++...- +-.
T Consensus        48 ~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g  127 (241)
T 1dhr_A           48 SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGG  127 (241)
T ss_dssp             EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred             cEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCC
Confidence            4567789999988887765         689999999842       1             234456666665531 024


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ++|. |+......    .++...|..+|+.++.+.+.         .++.++.|+||++-..+......      .    
T Consensus       128 ~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~------~----  193 (241)
T 1dhr_A          128 LLTLAGAKAALDG----TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP------E----  193 (241)
T ss_dssp             EEEEECCGGGGSC----CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST------T----
T ss_pred             EEEEECCHHHccC----CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc------c----
Confidence            7887 66543322    12345667799999887753         35899999999886654322100      0    


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                            .....++..+|+|++++.++++..  ..|+.+.+.|
T Consensus       194 ------~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g  229 (241)
T 1dhr_A          194 ------ADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVT  229 (241)
T ss_dssp             ------SCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEE
T ss_pred             ------hhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeC
Confidence                  001124567999999999987653  2477777765

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=98.05  E-value=3.4e-05  Score=64.29  Aligned_cols=141  Identities=9%  Similarity=0.076  Sum_probs=89.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v   55 (258)
                      .+.++.+|++|.+++.++++       +.|+|||+++...                   +.+..++++++    ++.+ .
T Consensus       102 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~  180 (346)
T 3kvo_A          102 KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-V  180 (346)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-S
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-C
Confidence            46788999999999888876       7899999998521                   34455566665    4455 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccc-cCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFG-FFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~-~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+........  .+....|..+|+.++.+.+.      .++.+..|.||+... .+...+..            
T Consensus       181 g~IV~iSS~~~~~~~~--~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~~~~------------  246 (346)
T 3kvo_A          181 AHILNISPPLNLNPVW--FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDMLGG------------  246 (346)
T ss_dssp             CEEEEECCCCCCCGGG--TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHHHCC------------
T ss_pred             CEEEEECCHHHcCCCC--CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHhhcc------------
Confidence            78887 6654332110  12345666799998877653      479999999996333 22211100            


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR  165 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~  165 (258)
                          ......+.+.+|+|++++.++.+....++.+.+-
T Consensus       247 ----~~~~~r~~~pedvA~~v~~L~s~~~~itG~~ivd  280 (346)
T 3kvo_A          247 ----PGIESQCRKVDIIADAAYSIFQKPKSFTGNFVID  280 (346)
T ss_dssp             ------CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEEH
T ss_pred             ----ccccccCCCHHHHHHHHHHHHhcCCCCCceEEEC
Confidence                0011125689999999999998743333333354

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=98.03  E-value=6.6e-06  Score=72.11  Aligned_cols=152  Identities=13%  Similarity=0.105  Sum_probs=100.1

Q ss_pred             eeEEeccCCCHHHHHHhhCC--CcEEEEccCccc-------------------hhchHHHHHHHHHh-CCccEEEc-CCC
Q 025054            7 CLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE-------------------VEDQFKLIAAIKEV-GNIKRFFP-TEY   63 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~-g~vk~~v~-S~~   63 (258)
                      +.++.+|++|.+++.+++++  .|+|||+++...                   +.+..++.+++... + .++||. ||.
T Consensus       314 v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~  392 (511)
T 2z5l_A          314 VVHAACDVAERDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSV  392 (511)
T ss_dssp             EEEEECCSSCHHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEG
T ss_pred             EEEEEeCCCCHHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCH
Confidence            77889999999999999975  999999998531                   44566777777665 6 788997 665


Q ss_pred             CCCCCCCCCCCCCccchhhHHHHHHHHH---hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeec
Q 025054           64 GSNVDAGHPIEPAKSGYARKAKIRRAIE---AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNK  140 (258)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~  140 (258)
                      ......    +....|..+|..++.+.+   ..|+++++|+||.+.+..+..  .     .....+.     ...+..++
T Consensus       393 a~~~g~----~g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~--~-----~~~~~~~-----~~g~~~l~  456 (511)
T 2z5l_A          393 TGTWGN----AGQGAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAA--G-----AGEESLS-----RRGLRAMD  456 (511)
T ss_dssp             GGTTCC----TTBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCC--C-----HHHHHHH-----HHTBCCBC
T ss_pred             HhcCCC----CCCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCcccc--c-----ccHHHHH-----hcCCCCCC
Confidence            332221    124567779999987765   479999999998773321100  0     0000010     11245789


Q ss_pred             cchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHH
Q 025054          141 EEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEK  182 (258)
Q Consensus       141 ~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~  182 (258)
                      .+|+++++..++..+.  . .+.+.    .+.+..+...+..
T Consensus       457 ~e~~a~~l~~al~~~~--~-~v~v~----~~d~~~~~~~~~~  491 (511)
T 2z5l_A          457 PDAAVDALLGAMGRND--V-CVTVV----DVDWERFAPATNA  491 (511)
T ss_dssp             HHHHHHHHHHHHHHTC--S-EEEEC----CBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC--C-EEEEE----eCCHHHHHhhhcc
Confidence            9999999999987652  2 23332    4567777665544

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=98.00  E-value=3e-05  Score=61.75  Aligned_cols=140  Identities=10%  Similarity=0.007  Sum_probs=82.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC--------CCcEEEEccC--cc--------c----------------hhch----HHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIK--------PVDVVISAVG--RT--------E----------------VEDQ----FKLIA   47 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~--~~--------~----------------~~~~----~~li~   47 (258)
                      .+.++.+|++|++++.++++        +.|++||+++  ..        .                +...    +.++.
T Consensus        55 ~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  134 (260)
T 2qq5_A           55 QCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGAR  134 (260)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHH
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHH
Confidence            47788999999988877653        5699999993  11        0                1122    33333


Q ss_pred             HHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCC
Q 025054           48 AIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGAT  119 (258)
Q Consensus        48 aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~  119 (258)
                      .+++.+ ..++|. |+......     .+...|..+|+.++.+.+.       .++.+++|+||++...+........  
T Consensus       135 ~~~~~~-~g~iv~isS~~~~~~-----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--  206 (260)
T 2qq5_A          135 LMVPAG-QGLIVVISSPGSLQY-----MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE--  206 (260)
T ss_dssp             HHGGGT-CCEEEEECCGGGTSC-----CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------
T ss_pred             HHhhcC-CcEEEEEcChhhcCC-----CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc--
Confidence            444566 678988 76544321     1245677799999877653       5899999999998876543211000  


Q ss_pred             CCCCCceEeccCCCcee-eeeccchHHHHHHHHhcCC
Q 025054          120 APPRENILFYGDGQPKA-IFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       120 ~~~~~~~~~~g~g~~~~-~~v~~~D~a~~~~~~l~~~  155 (258)
                      ......  ....-..+. .+...+|+|++++.++.++
T Consensus       207 ~~~~~~--~~~~~~~~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          207 EVLQDP--VLKQFKSAFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHTCT
T ss_pred             cccchh--HHHHHHhhhccCCCHHHHHHHHHHHhcCc
Confidence            000000  000000001 1357899999999998875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=98.00  E-value=4.2e-05  Score=61.90  Aligned_cols=147  Identities=14%  Similarity=0.036  Sum_probs=91.5

Q ss_pred             ceeEEeccCCC----HHHHHHhhC-------CCcEEEEccCccc-----------------------------hhchHHH
Q 025054            6 NCLIAQGDLHD----HESLVKAIK-------PVDVVISAVGRTE-----------------------------VEDQFKL   45 (258)
Q Consensus         6 gv~~~~~D~~d----~~~l~~al~-------g~d~Vi~~~~~~~-----------------------------~~~~~~l   45 (258)
                      .+.++.+|++|    .+++.++++       ++|+|||+++...                             +.+...+
T Consensus        75 ~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l  154 (288)
T 2x9g_A           75 TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL  154 (288)
T ss_dssp             CEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHH
T ss_pred             ceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHH
Confidence            47889999999    888877765       7899999997421                             1223445


Q ss_pred             HHHHHHhC---C------ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCccccc
Q 025054           46 IAAIKEVG---N------IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGF  108 (258)
Q Consensus        46 i~aa~~~g---~------vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~  108 (258)
                      ++++...-   +      ..++|. |+......    .++...|..+|+.++.+.+.       .|+.+++|+||++.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~  230 (288)
T 2x9g_A          155 TMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP----CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLP  230 (288)
T ss_dssp             HHHHHHHC--------CCCEEEEEECCTTTTSC----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCC
T ss_pred             HHHHHHHHhhcCCCCCCCCeEEEEEecccccCC----CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCc
Confidence            55554321   0      247887 66544322    12345577799988876653       4899999999998876


Q ss_pred             CcCCCCCCCCCCCCCCceEeccCCCceeee-eccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          109 FLPTMAQPGATAPPRENILFYGDGQPKAIF-NKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~-v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      + .. . ..    ....+. -..+.  ..+ .+.+|+|++++.++.+..  ..|+.+.+.|
T Consensus       231 ~-~~-~-~~----~~~~~~-~~~p~--~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  281 (288)
T 2x9g_A          231 V-AM-G-EE----EKDKWR-RKVPL--GRREASAEQIADAVIFLVSGSAQYITGSIIKVDG  281 (288)
T ss_dssp             T-TS-C-HH----HHHHHH-HTCTT--TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             c-cc-C-hH----HHHHHH-hhCCC--CCCCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence            5 21 0 00    000000 00000  114 689999999999997642  3477888875

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.99  E-value=4.2e-05  Score=61.72  Aligned_cols=155  Identities=10%  Similarity=-0.040  Sum_probs=91.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHH---
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKE---   51 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~---   51 (258)
                      .+.++.+|++|.+++.++++       +.|++||+++...                        +.+...+++++..   
T Consensus        52 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~  131 (281)
T 3zv4_A           52 NAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALV  131 (281)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            57889999999988877765       6799999997421                        2333455555533   


Q ss_pred             -hCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCC-CCCC
Q 025054           52 -VGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGA-TAPP  122 (258)
Q Consensus        52 -~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~  122 (258)
                       .+  .++|. |+.......    +....|..+|+.++.+.+.      ..+.+..|+||++...+......... ....
T Consensus       132 ~~~--g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~  205 (281)
T 3zv4_A          132 SSR--GSVVFTISNAGFYPN----GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSIS  205 (281)
T ss_dssp             HHT--CEEEEECCGGGTSSS----SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC-------
T ss_pred             hcC--CeEEEEecchhccCC----CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccccccccccccccc
Confidence             33  47776 654433221    2234566799999877754      34899999999988765432110000 0000


Q ss_pred             C-CceEeccCCCceeeeeccchHHHHHHHHhcCC-C--CCCceEEEcC
Q 025054          123 R-ENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R--TLNKTLYLRP  166 (258)
Q Consensus       123 ~-~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~--~~~~~~~l~g  166 (258)
                      . ..............+.+.+|+|.+++.++.++ .  -.|+.+++.|
T Consensus       206 ~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdG  253 (281)
T 3zv4_A          206 SVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDG  253 (281)
T ss_dssp             -CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESS
T ss_pred             chhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECC
Confidence            0 00000000011123678999999999999843 2  3578888876

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.96  E-value=3.9e-05  Score=60.54  Aligned_cols=139  Identities=10%  Similarity=-0.023  Sum_probs=88.7

Q ss_pred             CceeEEeccC--CCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHH----HH
Q 025054            5 INCLIAQGDL--HDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAI----KE   51 (258)
Q Consensus         5 ~gv~~~~~D~--~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~   51 (258)
                      .++.++..|+  .|.+++.++++       +.|++||+++...                    +.+..++++++    ++
T Consensus        64 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  143 (247)
T 3i1j_A           64 PQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKR  143 (247)
T ss_dssp             CCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence            3467778887  78887777664       7899999998521                    34445566665    44


Q ss_pred             hCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCCCC
Q 025054           52 VGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP  122 (258)
Q Consensus        52 ~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~  122 (258)
                      .+ ..++|. |+.......    +....|..+|+.++.+.+.        .++.+..|+||++...+......       
T Consensus       144 ~~-~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~-------  211 (247)
T 3i1j_A          144 SE-DASIAFTSSSVGRKGR----ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYP-------  211 (247)
T ss_dssp             SS-SEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHST-------
T ss_pred             CC-CCeEEEEcchhhcCCC----CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccc-------
Confidence            55 678887 664433221    2345667799999877643        46889999999887654321100       


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEE
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYL  164 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l  164 (258)
                               ......+...+|+|+++..++.+.. . .|+.+++
T Consensus       212 ---------~~~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          212 ---------DENPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             ---------TSCGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred             ---------ccCccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence                     0111234678999999999987642 2 3555543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.95  E-value=1.9e-05  Score=63.00  Aligned_cols=155  Identities=12%  Similarity=0.057  Sum_probs=92.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-c-------------------hhchHHHHHHH----HHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-E-------------------VEDQFKLIAAI----KEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-~-------------------~~~~~~li~aa----~~~g~   54 (258)
                      .+.++.+|++|++++.++++       +.|+|||+++.. .                   +.+..++++++    ++.+ 
T Consensus        57 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-  135 (262)
T 1zem_A           57 EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-  135 (262)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            47788999999998877765       789999999743 1                   23334445544    4456 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC--------CCCCC
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM--------AQPGA  118 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~--------~~~~~  118 (258)
                      ..++|. |+.......    +....|..+|+.++.+.+.       .++.+++|+||++...+....        .... 
T Consensus       136 ~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~-  210 (262)
T 1zem_A          136 YGRIVNTASMAGVKGP----PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQY-  210 (262)
T ss_dssp             CEEEEEECCHHHHSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTT-
T ss_pred             CcEEEEEcchhhccCC----CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccc-
Confidence            678887 664332211    1234567799888766543       589999999998876543210        0000 


Q ss_pred             CCCCCC-ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          119 TAPPRE-NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       119 ~~~~~~-~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...... ....+........+.+.+|+|++++.++.+..  ..|+.+.+.|
T Consensus       211 ~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          211 FSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             SCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             cccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence            000000 00000000000126789999999999987642  2466777654

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.90  E-value=5.8e-05  Score=59.94  Aligned_cols=150  Identities=12%  Similarity=0.082  Sum_probs=94.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~   54 (258)
                      .+..+.+|++|++++.++++       +.|+++|.++...                        +...+.++..+++.+ 
T Consensus        57 ~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-  135 (254)
T 4fn4_A           57 EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-  135 (254)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            36778999999998887664       6899999997321                        233455666666666 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      =-++|. ||.......    +....|..+|+.+..+-+.       .|+.+..|.||++...+.........  ...+..
T Consensus       136 ~G~IVnisS~~g~~~~----~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~--~~~~~~  209 (254)
T 4fn4_A          136 KGVIVNTASIAGIRGG----FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSE--LGMRTL  209 (254)
T ss_dssp             CEEEEEECCGGGTCSS----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCH--HHHHHH
T ss_pred             CcEEEEEechhhcCCC----CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcH--HHHHHH
Confidence            467887 665443221    2345677799998876653       68999999999887654322111000  000000


Q ss_pred             --EeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          127 --LFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       127 --~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                        ..+.  .  --+-..+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       210 ~~~~~~--~--~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDG  249 (254)
T 4fn4_A          210 TKLMSL--S--SRLAEPEDIANVIVFLASDEASFVNGDAVVVDG  249 (254)
T ss_dssp             HHHHTT--C--CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HhcCCC--C--CCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCC
Confidence              0000  0  125578999999999987653 2 477888865

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=97.84  E-value=2.5e-06  Score=70.63  Aligned_cols=99  Identities=12%  Similarity=0.051  Sum_probs=67.1

Q ss_pred             ccCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCcc-EEEc-CCCCC-----CCCCCC
Q 025054           12 GDLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIK-RFFP-TEYGS-----NVDAGH   71 (258)
Q Consensus        12 ~D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk-~~v~-S~~~~-----~~~~~~   71 (258)
                      +|+.+.+++.++++|+|+|||+++...             +..++++++++++.++++ +++. |....     ......
T Consensus        66 ~di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           66 AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             EEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             CCeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcC
Confidence            344444567788999999999998532             678899999999873144 4554 53210     001111


Q ss_pred             CCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCc
Q 025054           72 PIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFL  110 (258)
Q Consensus        72 ~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~  110 (258)
                      ..+|...|..+|...|++...    .+++.+.+|+.++||+..
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            234556677799998887643    589999999999999653

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.83  E-value=0.00018  Score=59.21  Aligned_cols=152  Identities=13%  Similarity=0.073  Sum_probs=92.6

Q ss_pred             eccCCCHHHHHHhh-------CCCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccEEEc
Q 025054           11 QGDLHDHESLVKAI-------KPVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKRFFP   60 (258)
Q Consensus        11 ~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~~v~   60 (258)
                      .+|+.|.+++.+++       .+.|++||+++...                   +.+..++++++    ++.+ ..++|.
T Consensus        70 ~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~  148 (319)
T 1gz6_A           70 VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIM  148 (319)
T ss_dssp             EEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred             EEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEE
Confidence            47888877655543       37899999997421                   23333444444    5667 789998


Q ss_pred             -CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054           61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG  132 (258)
Q Consensus        61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  132 (258)
                       |+.......    ++...|..+|..++.+.+.       .|+.++.|+||.+ ..+....       .          +
T Consensus       149 vsS~~~~~~~----~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~-------~----------~  206 (319)
T 1gz6_A          149 TASASGIYGN----FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV-------M----------P  206 (319)
T ss_dssp             ECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG-------S----------C
T ss_pred             ECChhhccCC----CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc-------C----------C
Confidence             664321111    1245677799998876653       4899999999976 3221110       0          0


Q ss_pred             CceeeeeccchHHHHHHHHhcCCCC-CCceEEEcCC------------------CCccCHHHHHHHHHHHhC
Q 025054          133 QPKAIFNKEEDIATYTIKAVDDPRT-LNKTLYLRPP------------------KNIYSFKELVALWEKKIG  185 (258)
Q Consensus       133 ~~~~~~v~~~D~a~~~~~~l~~~~~-~~~~~~l~g~------------------~~~~t~~e~~~~~~~~~g  185 (258)
                      .....+.+.+|+|.+++.++.++.. .|+.+.+.|-                  ....+..+..+++.....
T Consensus       207 ~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~  278 (319)
T 1gz6_A          207 EDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICD  278 (319)
T ss_dssp             HHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTC
T ss_pred             hhhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhc
Confidence            1112356899999999999876532 4666665320                  123566666666666543

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.83  E-value=0.0001  Score=58.75  Aligned_cols=152  Identities=11%  Similarity=0.071  Sum_probs=90.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hh----chHHHHHHHHHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VE----DQFKLIAAIKEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~----~~~~li~aa~~~g~vk   56 (258)
                      .+..+.+|++|++++.++++       +.|+++|.++...                  +.    ..+.++...++.+  -
T Consensus        56 ~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G  133 (258)
T 4gkb_A           56 RATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--G  133 (258)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--C
T ss_pred             CEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--C
Confidence            47788999999988777654       6899999998532                  22    2334444444444  4


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. ||.......    +....|..+|+.+..+-+.       .|+.+..|.||++...+........  ........-
T Consensus       134 ~IVnisS~~~~~~~----~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~~~~~~~~  207 (258)
T 4gkb_A          134 AIVNISSKTAVTGQ----GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATF--EDPEAKLAE  207 (258)
T ss_dssp             EEEEECCTHHHHCC----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-------------CHHHH
T ss_pred             eEEEEeehhhccCC----CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcc--cChHHHHHH
Confidence            6776 654332211    1245577799999876653       6899999999998876543321100  000000000


Q ss_pred             ccCCCcee--eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPKA--IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~~--~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ... ..+.  -+-..+|+|.+++.++++..  -.|+.+.+-|
T Consensus       208 ~~~-~~plg~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDG  248 (258)
T 4gkb_A          208 IAA-KVPLGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDG  248 (258)
T ss_dssp             HHT-TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHh-cCCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEECC
Confidence            000 1111  25678999999999987653  2478888875

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.80  E-value=0.00011  Score=59.54  Aligned_cols=146  Identities=12%  Similarity=0.032  Sum_probs=92.0

Q ss_pred             ceeEEeccCCCHH-----------------HHHHhhC-------CCcEEEEccCccc-----------------------
Q 025054            6 NCLIAQGDLHDHE-----------------SLVKAIK-------PVDVVISAVGRTE-----------------------   38 (258)
Q Consensus         6 gv~~~~~D~~d~~-----------------~l~~al~-------g~d~Vi~~~~~~~-----------------------   38 (258)
                      .+.++.+|++|++                 ++.++++       +.|++||+++...                       
T Consensus        61 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (291)
T 1e7w_A           61 SAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAME  140 (291)
T ss_dssp             CEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHH
T ss_pred             eeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccH
Confidence            4788999999988                 8877765       7899999997421                       


Q ss_pred             ----------hhchHHHHHHHH----HhCC-----ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------
Q 025054           39 ----------VEDQFKLIAAIK----EVGN-----IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------   92 (258)
Q Consensus        39 ----------~~~~~~li~aa~----~~g~-----vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------   92 (258)
                                +.+...+++++.    +.+.     ..++|. |+......    .+....|..+|+.++.+.+.      
T Consensus       141 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la~e~~  216 (291)
T 1e7w_A          141 TATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP----LLGYTIYTMAKGALEGLTRSAALELA  216 (291)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC----CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC----CCCCchhHHHHHHHHHHHHHHHHHHH
Confidence                      122334445543    3320     367887 66544322    12345677799999876653      


Q ss_pred             -CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCcee--eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054           93 -EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKA--IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus        93 -~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~--~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .++.++.|+||++...+ . +. ..   . ...  +..  ..+.  .+.+.+|+|++++.++.++.  ..|+.+.+.|
T Consensus       217 ~~gI~vn~v~PG~v~T~~-~-~~-~~---~-~~~--~~~--~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  284 (291)
T 1e7w_A          217 PLQIRVNGVGPGLSVLVD-D-MP-PA---V-WEG--HRS--KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  284 (291)
T ss_dssp             GGTEEEEEEEESSBCCGG-G-SC-HH---H-HHH--HHT--TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcCeEEEEEeeCCccCCc-c-CC-HH---H-HHH--HHh--hCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence             58999999999987655 2 10 00   0 000  000  0111  25689999999999997642  2577888875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.79  E-value=0.00015  Score=56.98  Aligned_cols=149  Identities=10%  Similarity=0.041  Sum_probs=89.9

Q ss_pred             CceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-----------------hhc----hHHHHHHHHHhCCccEEEc
Q 025054            5 INCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-----------------VED----QFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-----------------~~~----~~~li~aa~~~g~vk~~v~   60 (258)
                      ..+..+.+|++|+++++++++   +.|+++|.++...                 +.+    .+.++...++.+  -++|.
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVn  131 (242)
T 4b79_A           54 PRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG--GSILN  131 (242)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEE
T ss_pred             CCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEE
Confidence            457788999999988877665   7899999998532                 222    233344444444  47776


Q ss_pred             -CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054           61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG  132 (258)
Q Consensus        61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  132 (258)
                       ||.......    +....|..+|+.+..+-+.       .|+.+..|.||++...+...+..    .... .-.+..  
T Consensus       132 isS~~~~~~~----~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~----~~~~-~~~~~~--  200 (242)
T 4b79_A          132 IASMYSTFGS----ADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA----DVEA-TRRIMQ--  200 (242)
T ss_dssp             ECCGGGTSCC----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC----CHHH-HHHHHH--
T ss_pred             EeeccccCCC----CCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC----CHHH-HHHHHh--
Confidence             665433221    2244566799999876653       68999999999887654432111    0000 000000  


Q ss_pred             Ccee-eeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          133 QPKA-IFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       133 ~~~~-~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      ..++ -+-..+|+|.+++.++++.. . .|+.+.+-|
T Consensus       201 ~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDG  237 (242)
T 4b79_A          201 RTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDG  237 (242)
T ss_dssp             TCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECc
Confidence            0000 15678999999999987653 2 477787765

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.76  E-value=0.0005  Score=54.28  Aligned_cols=144  Identities=11%  Similarity=0.056  Sum_probs=88.1

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~   54 (258)
                      .++..+.+|++|++++.++++       +.|+++|.++...                   +.+    .+.++...++.+ 
T Consensus        47 ~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-  125 (247)
T 3ged_A           47 PNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-  125 (247)
T ss_dssp             TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             CCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-
Confidence            357788999999988877654       6899999997532                   222    334444444444 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                       -++|. ||.......    +....|..+|+.+..+-+.      .++.+..|.||++-......+.       ....-.
T Consensus       126 -G~IInisS~~~~~~~----~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~-------~~~~~~  193 (247)
T 3ged_A          126 -GRIINIASTRAFQSE----PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFT-------QEDCAA  193 (247)
T ss_dssp             -CEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CC-------HHHHHT
T ss_pred             -CcEEEEeecccccCC----CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHH-------HHHHhc
Confidence             46776 655433221    1244566799998866543      5899999999987543221110       000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                      +|-   .  -+-..+|+|.+++.++++.--.|+.+.+-|
T Consensus       194 ~Pl---~--R~g~pediA~~v~fL~s~~~iTG~~i~VDG  227 (247)
T 3ged_A          194 IPA---G--KVGTPKDISNMVLFLCQQDFITGETIIVDG  227 (247)
T ss_dssp             STT---S--SCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             CCC---C--CCcCHHHHHHHHHHHHhCCCCCCCeEEECc
Confidence            110   1  145789999999999875423477888865

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.72  E-value=0.00033  Score=56.93  Aligned_cols=66  Identities=11%  Similarity=-0.113  Sum_probs=45.3

Q ss_pred             ccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHH
Q 025054           77 KSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKA  151 (258)
Q Consensus        77 ~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~  151 (258)
                      ..|..+|+.++.+.+.     .++.++.|+||++...+....                       ...+.++.++.++.+
T Consensus       234 ~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~~-----------------------~~~~~~~~a~~~~~~  290 (311)
T 3o26_A          234 AAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYGI-----------------------GNYTAEEGAEHVVRI  290 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTTC-----------------------CSBCHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCCC-----------------------CCCCHHHHHHHHHHH
Confidence            4566799999887754     468899999998866542210                       114678899999998


Q ss_pred             hcCCC-CCCceEEEc
Q 025054          152 VDDPR-TLNKTLYLR  165 (258)
Q Consensus       152 l~~~~-~~~~~~~l~  165 (258)
                      +..+. ..+..++.+
T Consensus       291 ~~~~~~~~~g~~~~~  305 (311)
T 3o26_A          291 ALFPDDGPSGFFYDC  305 (311)
T ss_dssp             HTCCSSCCCSCEETC
T ss_pred             HhCCCCCCCceEecc
Confidence            87663 345556555

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.65  E-value=8.8e-05  Score=58.92  Aligned_cols=150  Identities=10%  Similarity=0.026  Sum_probs=91.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|+++|.++...                   +.+    .+.++...++.++-
T Consensus        59 ~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~  138 (255)
T 4g81_D           59 DAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSG  138 (255)
T ss_dssp             CEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             cEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCC
Confidence            36778899999988877665       5799999998532                   222    34444444443214


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC-ce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE-NI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~-~~  126 (258)
                      -++|. |+.......    +....|..+|+.+..+-+.       .|+.+..|.||++...+........  ..... .-
T Consensus       139 G~IVnisS~~~~~~~----~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~~~~~~~  212 (255)
T 4g81_D          139 GKIINIGSLTSQAAR----PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDK--QFDSWVKS  212 (255)
T ss_dssp             EEEEEECCGGGTSBC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCH--HHHHHHHH
T ss_pred             CEEEEEeehhhcCCC----CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCH--HHHHHHHh
Confidence            57887 665443221    1244566799998876653       6899999999998766543211100  00000 00


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+|   -.  -+-..+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       213 ~~P---l~--R~g~pediA~~v~fL~S~~a~~iTG~~i~VDG  249 (255)
T 4g81_D          213 STP---SQ--RWGRPEELIGTAIFLSSKASDYINGQIIYVDG  249 (255)
T ss_dssp             HST---TC--SCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCC---CC--CCcCHHHHHHHHHHHhCchhCCCcCCEEEECC
Confidence            011   01  15678999999999987653  2477888865

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=97.59  E-value=0.0001  Score=64.23  Aligned_cols=134  Identities=14%  Similarity=0.131  Sum_probs=89.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC------CCcEEEEccCcc-c-------------------hhchHHHHHHHHHhCCccEEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRT-E-------------------VEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~-~-------------------~~~~~~li~aa~~~g~vk~~v   59 (258)
                      .+.++.+|++|.+++.++++      +.|+|||+++.. .                   +.+..++.+++...+ .++||
T Consensus       293 ~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV  371 (496)
T 3mje_A          293 RVTIAACDAADREALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFV  371 (496)
T ss_dssp             EEEEEECCTTCHHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEE
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEE
Confidence            37789999999999998886      479999999854 1                   456778888888877 88998


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCce
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPK  135 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  135 (258)
                      . ||.......    +....|..+|..++.+.+   ..|++++.|.||.+.+.....-  ..    ....  +..   ..
T Consensus       372 ~~SS~a~~~g~----~g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~--~~----~~~~--l~~---~g  436 (496)
T 3mje_A          372 LFSSGAAVWGS----GGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATD--PE----VHDR--LVR---QG  436 (496)
T ss_dssp             EEEEHHHHTTC----TTCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC------------CHH--HHH---TT
T ss_pred             EEeChHhcCCC----CCcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccC--hH----HHHH--HHh---cC
Confidence            7 664322211    124567779998876654   4799999999998875432210  00    0001  111   11


Q ss_pred             eeeeccchHHHHHHHHhcCC
Q 025054          136 AIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       136 ~~~v~~~D~a~~~~~~l~~~  155 (258)
                      +..++.++.++++..++..+
T Consensus       437 ~~~l~pe~~~~~l~~~l~~~  456 (496)
T 3mje_A          437 VLAMEPEHALGALDQMLEND  456 (496)
T ss_dssp             EEEECHHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHcCC
Confidence            34568888888888888754

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.47  E-value=0.00024  Score=55.98  Aligned_cols=150  Identities=12%  Similarity=0.040  Sum_probs=92.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCccEEEc
Q 025054            6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~vk~~v~   60 (258)
                      .+..+.+|++|++++.++++  +.|+++|.++...                   +.+    .+.++...++.|+--++|.
T Consensus        57 ~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVn  136 (247)
T 4hp8_A           57 NASALLIDFADPLAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVN  136 (247)
T ss_dssp             CEEEEECCTTSTTTTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             cEEEEEccCCCHHHHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            36778999999988887776  5899999998532                   223    3444444455442357887


Q ss_pred             -CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc-C
Q 025054           61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG-D  131 (258)
Q Consensus        61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~  131 (258)
                       ||.......    +....|..+|+.+..+-+.       .|+.+..|.||++.......+....    .... .+.. -
T Consensus       137 isS~~~~~g~----~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~----~~~~-~~~~~~  207 (247)
T 4hp8_A          137 IASLLSFQGG----IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADA----ARNK-AILERI  207 (247)
T ss_dssp             ECCGGGTSCC----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH----HHHH-HHHTTC
T ss_pred             EechhhCCCC----CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCH----HHHH-HHHhCC
Confidence             665433221    1234566799999876653       6899999999998765543211000    0000 0000 0


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      +-.  -+-..+|+|.+++.++++.. . .|+.+.+-|
T Consensus       208 Plg--R~g~peeiA~~v~fLaSd~a~~iTG~~i~VDG  242 (247)
T 4hp8_A          208 PAG--RWGHSEDIAGAAVFLSSAAADYVHGAILNVDG  242 (247)
T ss_dssp             TTS--SCBCTHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCC--CCcCHHHHHHHHHHHhCchhcCCcCCeEEECc
Confidence            000  14578999999999987653 2 477787765

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.43  E-value=0.00013  Score=57.98  Aligned_cols=151  Identities=9%  Similarity=0.008  Sum_probs=87.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhC-C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVG-N   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g-~   54 (258)
                      .+..+.+|++|++++.++++       +.|+++|.++...                       ......+..++...- +
T Consensus        59 ~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~  138 (256)
T 4fs3_A           59 EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE  138 (256)
T ss_dssp             SCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            57889999999988877664       6899999987421                       011112222222211 0


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      =-++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+.......... ...-.-
T Consensus       139 ~G~IVnisS~~~~~~~----~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~-~~~~~~  213 (256)
T 4fs3_A          139 GGSIVATTYLGGEFAV----QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTI-LKEIKE  213 (256)
T ss_dssp             CEEEEEEECGGGTSCC----TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHH-HHHHHH
T ss_pred             CCEEEEEeccccccCc----ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHH-HHHHHh
Confidence            136776 655443221    2245566799998876553       689999999998876544321110000 000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      .+|   -.  -+...+|+|.+++.++++.. . .|+.+.+-|
T Consensus       214 ~~P---l~--R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDG  250 (256)
T 4fs3_A          214 RAP---LK--RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDS  250 (256)
T ss_dssp             HST---TS--SCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCC---CC--CCcCHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence            011   00  15578999999999987653 2 477888765

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=97.33  E-value=0.00072  Score=59.44  Aligned_cols=134  Identities=12%  Similarity=0.018  Sum_probs=87.0

Q ss_pred             ceeEEeccCCCHHHHHHhhCC------CcEEEEccCccc-------------------hhchHHHHHHHHHhCC----cc
Q 025054            6 NCLIAQGDLHDHESLVKAIKP------VDVVISAVGRTE-------------------VEDQFKLIAAIKEVGN----IK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g------~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~----vk   56 (258)
                      .+.++.+|++|.+++.++++.      .|+|||+++...                   +.+..++.+++.....    ..
T Consensus       316 ~v~~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~  395 (525)
T 3qp9_A          316 TATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP  395 (525)
T ss_dssp             EEEEEECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC
Confidence            378899999999999998864      599999998531                   4566777777765431    46


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG  132 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  132 (258)
                      +||. ||.......    +....|..+|..++.+.++   .|++++.|.||.+-..+..   ...    ....+  -.  
T Consensus       396 ~iV~~SS~a~~~g~----~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~---~~~----~~~~~--~~--  460 (525)
T 3qp9_A          396 VLVLFSSVAAIWGG----AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVT---EGA----TGERL--RR--  460 (525)
T ss_dssp             EEEEEEEGGGTTCC----TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGG---SSH----HHHHH--HH--
T ss_pred             EEEEECCHHHcCCC----CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcccccccc---chh----hHHHH--Hh--
Confidence            7886 665433221    1245677799999887654   5899999999988222110   000    00001  00  


Q ss_pred             CceeeeeccchHHHHHHHHhcCC
Q 025054          133 QPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       133 ~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                       ..+..++.+++++++..++..+
T Consensus       461 -~g~~~l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          461 -LGLRPLAPATALTALDTALGHG  482 (525)
T ss_dssp             -TTBCCBCHHHHHHHHHHHHHHT
T ss_pred             -cCCCCCCHHHHHHHHHHHHhCC
Confidence             1124567888888888888765

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.32  E-value=0.00081  Score=46.12  Aligned_cols=54  Identities=30%  Similarity=0.198  Sum_probs=46.8

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcC
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPT   61 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S   61 (258)
                      ..+++++.+|+.+.+++.++++++|+||++++..   ...+++++|.+.| ++++..|
T Consensus        47 ~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~---~~~~~~~~~~~~g-~~~~~~~  100 (118)
T 3ic5_A           47 RMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF---LTPIIAKAAKAAG-AHYFDLT  100 (118)
T ss_dssp             TTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG---GHHHHHHHHHHTT-CEEECCC
T ss_pred             hCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch---hhHHHHHHHHHhC-CCEEEec
Confidence            4578899999999999999999999999999654   4688999999999 8888764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.28  E-value=0.0011  Score=52.94  Aligned_cols=154  Identities=11%  Similarity=0.048  Sum_probs=92.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC----------CCcEEEEccCccc------------------------hhchHHHHHHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIK----------PVDVVISAVGRTE------------------------VEDQFKLIAAIKE   51 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~----------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~   51 (258)
                      .+.++.+|++|++++.++++          +.|++||+++...                        +.+...+++++..
T Consensus        57 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  136 (269)
T 2h7i_A           57 KAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLP  136 (269)
T ss_dssp             CCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             CceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            46789999999998888776          7899999987320                        2334456666654


Q ss_pred             hC-CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC
Q 025054           52 VG-NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP  122 (258)
Q Consensus        52 ~g-~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~  122 (258)
                      .- .-.++|. |+.+.. .    .+....|..+|+.++.+.+.       .++.++.|+||++...+...+.. ......
T Consensus       137 ~~~~~g~iv~iss~~~~-~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~  210 (269)
T 2h7i_A          137 IMNPGGSIVGMDFDPSR-A----MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVG-GALGEE  210 (269)
T ss_dssp             GEEEEEEEEEEECCCSS-C----CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHT-TTTCHH
T ss_pred             hhccCCeEEEEcCcccc-c----cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhcccc-ccchhh
Confidence            21 0147887 654431 1    12344566799998876653       58999999999887654321100 000000


Q ss_pred             CC----c-eEeccCCCcee--eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          123 RE----N-ILFYGDGQPKA--IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       123 ~~----~-~~~~g~g~~~~--~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..    . ...+.. ..+.  .+...+|+|++++.++.+..  -.|+.+.+.|
T Consensus       211 ~~~~~~~~~~~~~~-~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  262 (269)
T 2h7i_A          211 AGAQIQLLEEGWDQ-RAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADG  262 (269)
T ss_dssp             HHHHHHHHHHHHHH-HCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             HHHHHHHHHHhhhc-cCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence            00    0 000000 0111  25688999999999998642  2467788865

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.14  E-value=0.0024  Score=57.19  Aligned_cols=161  Identities=11%  Similarity=0.021  Sum_probs=95.9

Q ss_pred             eccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccEEEc
Q 025054           11 QGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKRFFP   60 (258)
Q Consensus        11 ~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~~v~   60 (258)
                      .+|+.|.+++.++++       +.|++||+++...                   +.+..++++++    ++.+ -.++|.
T Consensus        80 ~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~  158 (613)
T 3oml_A           80 VADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIM  158 (613)
T ss_dssp             EECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEE
Confidence            368888887777665       5799999998531                   33444555555    5566 678887


Q ss_pred             -CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054           61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG  132 (258)
Q Consensus        61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  132 (258)
                       ||.......    +....|..+|+.++.+.+.       .|+.+..|.||..-    +.....     .         .
T Consensus       159 isS~a~~~~~----~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t----~~~~~~-----~---------~  216 (613)
T 3oml_A          159 TSSNSGIYGN----FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS----RMTEGI-----L---------P  216 (613)
T ss_dssp             ECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------CCC-----C---------C
T ss_pred             ECCHHHcCCC----CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC----hhhhhc-----c---------c
Confidence             664322111    1245677799999876653       58999999998531    111000     0         0


Q ss_pred             CceeeeeccchHHHHHHHHhcCCC-CCCceEEEcC-----------C--------CCccCHHHHHHHHHHHhCCcceeEe
Q 025054          133 QPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRP-----------P--------KNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       133 ~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g-----------~--------~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                      .........+|+|.+++.++.+.. ..|+.+.+.|           .        +...|..++.+.+.++.........
T Consensus       217 ~~~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~~~~~~  296 (613)
T 3oml_A          217 DILFNELKPKLIAPVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMSKAKHL  296 (613)
T ss_dssp             HHHHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCTTCBCC
T ss_pred             hhhhhcCCHHHHHHHHHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccccCcCC
Confidence            011223478999999999887653 2355555432           1        1246889999999999886543333


Q ss_pred             cC
Q 025054          193 VT  194 (258)
Q Consensus       193 ~~  194 (258)
                      -+
T Consensus       297 ~~  298 (613)
T 3oml_A          297 GA  298 (613)
T ss_dssp             SS
T ss_pred             CC
Confidence            33

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=96.99  E-value=0.00018  Score=57.67  Aligned_cols=154  Identities=14%  Similarity=0.075  Sum_probs=87.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~   58 (258)
                      .+..+.+|++|++++.++++       +.|++|+.++...                   +.+...+.+++...= +-.++
T Consensus        76 ~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~I  155 (273)
T 4fgs_A           76 GAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSV  155 (273)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEE
T ss_pred             CeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeE
Confidence            36778999999988887665       5799999997532                   334444555443210 01356


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc-eEec
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN-ILFY  129 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  129 (258)
                      |. |+.......    +....|..+|+.+..+-+.       .|+.+..|.||++...+...+....  ...... ...+
T Consensus       156 InisS~~~~~~~----~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~~~~~~~~~~  229 (273)
T 4fgs_A          156 VLTGSTAGSTGT----PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKD--PVQQQGLLNAL  229 (273)
T ss_dssp             EEECCGGGGSCC----TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------C--HHHHHHHHHHH
T ss_pred             EEEeehhhccCC----CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccC--chhhHHHHHHH
Confidence            65 554332221    2245677799999877653       5899999999988765433211000  000000 0000


Q ss_pred             cCCCcee-eeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          130 GDGQPKA-IFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~-~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      .. ..++ -+-..+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       230 ~~-~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDG  268 (273)
T 4fgs_A          230 AA-QVPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVDG  268 (273)
T ss_dssp             HH-HSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             Hh-cCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEeECc
Confidence            00 0000 15578999999999997653 2 477888865

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.80  E-value=0.0044  Score=48.99  Aligned_cols=151  Identities=7%  Similarity=-0.047  Sum_probs=87.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC---------CCc--EEEEccCcc-----------c-----------hhchHHHHHHHHHh
Q 025054            6 NCLIAQGDLHDHESLVKAIK---------PVD--VVISAVGRT-----------E-----------VEDQFKLIAAIKEV   52 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~---------g~d--~Vi~~~~~~-----------~-----------~~~~~~li~aa~~~   52 (258)
                      .+.++.+|++|++++.++++         +.|  ++||+++..           .           +.+..++++++...
T Consensus        61 ~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  140 (259)
T 1oaa_A           61 KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNA  140 (259)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             eEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47888999999998877653         357  999998741           1           23445666666542


Q ss_pred             ------CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054           53 ------GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGATA  120 (258)
Q Consensus        53 ------g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~~~  120 (258)
                            + ..++|. |+......    .++...|..+|+.++.+.+.     .++.++.|+||++...+........   
T Consensus       141 ~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~---  212 (259)
T 1oaa_A          141 FQDSPGL-SKTVVNISSLCALQP----YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETS---  212 (259)
T ss_dssp             SCCCTTC-EEEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHC---
T ss_pred             HhhccCC-CceEEEEcCchhcCC----CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhcc---
Confidence                  3 457887 66544322    12345677799999987764     3588899999988665432110000   


Q ss_pred             CCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCC-CCceEEE
Q 025054          121 PPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRT-LNKTLYL  164 (258)
Q Consensus       121 ~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~-~~~~~~l  164 (258)
                      .................+.+.+|+|++++.++.+... .|+.+.+
T Consensus       213 ~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          213 KDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             SCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             CChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence            0000000000000011367899999999998874332 2444443

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.78  E-value=0.0078  Score=47.84  Aligned_cols=154  Identities=19%  Similarity=0.165  Sum_probs=88.9

Q ss_pred             eEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------------hhchHHHHHHHHHhCCc
Q 025054            8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------------~~~~~~li~aa~~~g~v   55 (258)
                      ..+.+|++|++++.++++       +.|++||.++...                         +...+.++...++.+ =
T Consensus        53 ~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~  131 (261)
T 4h15_A           53 LFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-S  131 (261)
T ss_dssp             TEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             EEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-C
Confidence            457899999988777654       6899999886311                         233455555566666 4


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccc-hhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-----CCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSG-YARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-----QPGATAP  121 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~-~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-----~~~~~~~  121 (258)
                      .++|. |+.......    +....+ ..+|+.++.+.+.       .|+.+..|.||++...+...+.     ..+....
T Consensus       132 G~Iv~isS~~~~~~~----~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~  207 (261)
T 4h15_A          132 GVVVHVTSIQRVLPL----PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLE  207 (261)
T ss_dssp             EEEEEECCGGGTSCC----TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHH
T ss_pred             ceEEEEEehhhccCC----CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchh
Confidence            67887 654432221    112344 4599999876653       6899999999988764322110     0000000


Q ss_pred             CCCceEeccCCCce-eeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          122 PRENILFYGDGQPK-AIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       122 ~~~~~~~~g~g~~~-~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      .......-.....+ --+...+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       208 ~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDG  255 (261)
T 4h15_A          208 GGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDG  255 (261)
T ss_dssp             HHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECC
Confidence            00000000000000 015678999999999987653 2 477888876

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=96.47  E-value=0.0016  Score=52.67  Aligned_cols=132  Identities=9%  Similarity=-0.008  Sum_probs=76.0

Q ss_pred             CCCcEEEEccCcc-----c----------------hhchHHHHHHHHHhC-CccEEEc-CCCCCCCCCCCCCCCC-ccch
Q 025054           25 KPVDVVISAVGRT-----E----------------VEDQFKLIAAIKEVG-NIKRFFP-TEYGSNVDAGHPIEPA-KSGY   80 (258)
Q Consensus        25 ~g~d~Vi~~~~~~-----~----------------~~~~~~li~aa~~~g-~vk~~v~-S~~~~~~~~~~~~~~~-~~~~   80 (258)
                      .+.|++||+++..     .                +.+..++++++...= +-.++|. |+.......    +.. ..|.
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~----~~~~~~Y~  193 (297)
T 1d7o_A          118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII----PGYGGGMS  193 (297)
T ss_dssp             SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC----TTCTTTHH
T ss_pred             CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCC----CCcchHHH
Confidence            3789999998631     0                344556667765431 0147776 554332211    122 3577


Q ss_pred             hhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHh
Q 025054           81 ARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAV  152 (258)
Q Consensus        81 ~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l  152 (258)
                      .+|+.++.+.+.        .|+.++.|+||++...+......   .......+ ....+  ...+.+.+|+|++++.++
T Consensus       194 asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~-~~~~p--~~r~~~pedvA~~v~~l~  267 (297)
T 1d7o_A          194 SAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF---IDTMIEYS-YNNAP--IQKTLTADEVGNAAAFLV  267 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH---HHHHHHHH-HHHSS--SCCCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc---cHHHHHHh-hccCC--CCCCCCHHHHHHHHHHHh
Confidence            799998866542        58999999999988765332100   00000000 00000  012568999999999998


Q ss_pred             cCCC--CCCceEEEcC
Q 025054          153 DDPR--TLNKTLYLRP  166 (258)
Q Consensus       153 ~~~~--~~~~~~~l~g  166 (258)
                      .+..  ..|+.+++.|
T Consensus       268 s~~~~~itG~~i~vdg  283 (297)
T 1d7o_A          268 SPLASAITGATIYVDN  283 (297)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CccccCCCCCEEEECC
Confidence            7642  2477888875

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.39  E-value=0.014  Score=45.57  Aligned_cols=131  Identities=8%  Similarity=-0.045  Sum_probs=77.8

Q ss_pred             CCCcEEEEccCcc------c----------------hhchHHHHHHH----HHhCCccEEEc-CCCCCCCCCCCCCCCCc
Q 025054           25 KPVDVVISAVGRT------E----------------VEDQFKLIAAI----KEVGNIKRFFP-TEYGSNVDAGHPIEPAK   77 (258)
Q Consensus        25 ~g~d~Vi~~~~~~------~----------------~~~~~~li~aa----~~~g~vk~~v~-S~~~~~~~~~~~~~~~~   77 (258)
                      .+.|+|||+++..      .                +.+..++++++    ++.+ ..++|. |+.......    +...
T Consensus        71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~----~~~~  145 (244)
T 1zmo_A           71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPL----AYNP  145 (244)
T ss_dssp             SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC----TTCT
T ss_pred             CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCC----CCch
Confidence            3689999999731      1                23334444444    4566 688998 665433221    2345


Q ss_pred             cchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc---CCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHH
Q 025054           78 SGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL---PTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATY  147 (258)
Q Consensus        78 ~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~  147 (258)
                      .|..+|+.++.+.+.       .++.++.|+||++...+.   ..+....    ....+.-...+.  ..+.+.+|+|++
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~p~--~r~~~pe~vA~~  219 (244)
T 1zmo_A          146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNP----ELRERVDRDVPL--GRLGRPDEMGAL  219 (244)
T ss_dssp             THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCH----HHHHHHHHHCTT--CSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchH----HHHHHHhcCCCC--CCCcCHHHHHHH
Confidence            677799999877653       589999999998876653   2110000    000000000000  126789999999


Q ss_pred             HHHHhcCCC--CCCceEEEcC
Q 025054          148 TIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       148 ~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ++.++.+..  ..|+.+.+.|
T Consensus       220 v~~l~s~~~~~~tG~~i~vdg  240 (244)
T 1zmo_A          220 ITFLASRRAAPIVGQFFAFTG  240 (244)
T ss_dssp             HHHHHTTTTGGGTTCEEEEST
T ss_pred             HHHHcCccccCccCCEEEeCC
Confidence            999998753  2477888765

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=96.07  E-value=0.003  Score=51.66  Aligned_cols=138  Identities=10%  Similarity=0.050  Sum_probs=61.7

Q ss_pred             CCCcEEEEccCcc-----c----------------hhchHHHHHHHHHhC-CccEEEc-CCCCCCCCCCCCCCCC-ccch
Q 025054           25 KPVDVVISAVGRT-----E----------------VEDQFKLIAAIKEVG-NIKRFFP-TEYGSNVDAGHPIEPA-KSGY   80 (258)
Q Consensus        25 ~g~d~Vi~~~~~~-----~----------------~~~~~~li~aa~~~g-~vk~~v~-S~~~~~~~~~~~~~~~-~~~~   80 (258)
                      .+.|++||+++..     .                +.+...+++++...= .-.++|. |+.......    +.. ..|.
T Consensus       132 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----~~~~~~Y~  207 (319)
T 2ptg_A          132 GQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI----PGYGGGMS  207 (319)
T ss_dssp             SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC-----------------
T ss_pred             CCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc----CccchhhH
Confidence            3789999998631     1                334456666665430 0147776 554332211    112 3566


Q ss_pred             hhHHHHHHHHH--------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHh
Q 025054           81 ARKAKIRRAIE--------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAV  152 (258)
Q Consensus        81 ~~k~~~e~~l~--------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l  152 (258)
                      .+|+.++.+.+        ..|+.++.|+||++...+...+........................+...+|+|++++.++
T Consensus       208 asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~  287 (319)
T 2ptg_A          208 SAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLL  287 (319)
T ss_dssp             -----THHHHHHHHHHHHHHHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHh
Confidence            78888776553        1589999999999877553321100000000000000000000012568999999999998


Q ss_pred             cCCC--CCCceEEEcC
Q 025054          153 DDPR--TLNKTLYLRP  166 (258)
Q Consensus       153 ~~~~--~~~~~~~l~g  166 (258)
                      .+..  -.|+.+.+.|
T Consensus       288 s~~~~~itG~~i~vdG  303 (319)
T 2ptg_A          288 SPLARAVTGATLYVDN  303 (319)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CcccCCccCCEEEECC
Confidence            7642  3477888875

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.05  E-value=0.016  Score=48.40  Aligned_cols=50  Identities=22%  Similarity=0.193  Sum_probs=43.6

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      .+..+..|.+|.++|.++++++|+||+++++.   ....++++|.++|  +|+|-
T Consensus        57 ~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~---~~~~v~~~~~~~g--~~yvD  106 (365)
T 3abi_A           57 FATPLKVDASNFDKLVEVMKEFELVIGALPGF---LGFKSIKAAIKSK--VDMVD  106 (365)
T ss_dssp             TSEEEECCTTCHHHHHHHHTTCSEEEECCCGG---GHHHHHHHHHHHT--CEEEE
T ss_pred             cCCcEEEecCCHHHHHHHHhCCCEEEEecCCc---ccchHHHHHHhcC--cceEe
Confidence            45678899999999999999999999999875   4678999999999  57775

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=95.82  E-value=0.016  Score=47.58  Aligned_cols=80  Identities=9%  Similarity=-0.015  Sum_probs=49.3

Q ss_pred             CCcEEEEccCcc---c------------------hhchHHHHHHHHHhCCc--cEEEc-CCCCCCCCCCCCCCCCc-cch
Q 025054           26 PVDVVISAVGRT---E------------------VEDQFKLIAAIKEVGNI--KRFFP-TEYGSNVDAGHPIEPAK-SGY   80 (258)
Q Consensus        26 g~d~Vi~~~~~~---~------------------~~~~~~li~aa~~~g~v--k~~v~-S~~~~~~~~~~~~~~~~-~~~   80 (258)
                      +.|++||.++..   .                  +.+...++.++...= .  .++|. |+.......    +... .|.
T Consensus       113 ~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m-~~~g~Iv~isS~~~~~~~----~~~~~~Y~  187 (329)
T 3lt0_A          113 KINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM-KPQSSIISLTYHASQKVV----PGYGGGMS  187 (329)
T ss_dssp             CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEEECGGGTSCC----TTCTTTHH
T ss_pred             CCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hhCCeEEEEeCccccCCC----CcchHHHH
Confidence            689999999741   1                  233445555554321 1  36776 554332221    1232 577


Q ss_pred             hhHHHHHHHHH-------h-CCCCeEEEecCcccccCc
Q 025054           81 ARKAKIRRAIE-------A-EGIPHTYVSCNCSFGFFL  110 (258)
Q Consensus        81 ~~k~~~e~~l~-------~-~~~~~t~lr~~~~~~~~~  110 (258)
                      .+|+.++.+.+       . .++.+..|.||++...+.
T Consensus       188 asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~  225 (329)
T 3lt0_A          188 SAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAA  225 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhH
Confidence            79999876653       3 589999999999887554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.71  E-value=0.19  Score=44.85  Aligned_cols=159  Identities=12%  Similarity=0.043  Sum_probs=92.9

Q ss_pred             eeEEeccC-CCHHHHHH----hhCCCcEEEEccCccc-------------------h----hchHHHHHHHHHhCCccEE
Q 025054            7 CLIAQGDL-HDHESLVK----AIKPVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGNIKRF   58 (258)
Q Consensus         7 v~~~~~D~-~d~~~l~~----al~g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~vk~~   58 (258)
                      +..+.+|+ ++.+.+.+    .+.+.|++||.++...                   +    ...+.++...++.+ -.++
T Consensus       371 ~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~I  449 (604)
T 2et6_A          371 AWPDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRI  449 (604)
T ss_dssp             EEEECCCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEE
T ss_pred             EEEEEcChHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEE
Confidence            34456676 55443322    3447899999998521                   2    23344444455555 4678


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. ||.......    +....|..+|+.+..+.+.       .|+.+..|.||. -..+...   .    ..        
T Consensus       450 VnisS~ag~~~~----~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~---~----~~--------  509 (604)
T 2et6_A          450 INITSTSGIYGN----FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLS---I----MR--------  509 (604)
T ss_dssp             EEECCHHHHSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------------------
T ss_pred             EEECChhhccCC----CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccc---c----Cc--------
Confidence            87 664322211    1234577799998766543       689999999983 2111110   0    00        


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcCC----------------CCccCHHHHHHHHHHHhCCcc
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRPP----------------KNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g~----------------~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      .  ........+|+|.+++.++.+.. -.|+.+.+.|-                ....|..++++.+.++...+-
T Consensus       510 ~--~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  582 (604)
T 2et6_A          510 E--QDKNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFTT  582 (604)
T ss_dssp             -----CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCSS
T ss_pred             h--hhccCCCHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcccc
Confidence            0  00123478999999999887642 34666666541                235789999999999887643

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.22  E-value=0.026  Score=52.12  Aligned_cols=95  Identities=15%  Similarity=0.219  Sum_probs=65.6

Q ss_pred             eeEEeccCCCHHHHHHhhCC------CcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEEc-
Q 025054            7 CLIAQGDLHDHESLVKAIKP------VDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFFP-   60 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~g------~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v~-   60 (258)
                      +.++.+|++|.+++.++++.      .|+|||+++...                   +.+..++.+++ ... . +||. 
T Consensus       586 v~~~~~Dvsd~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~-~~~-l-~iV~~  662 (795)
T 3slk_A          586 VSLQACDVADRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELI-DPD-V-ALVLF  662 (795)
T ss_dssp             EEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHS-CTT-S-EEEEE
T ss_pred             EEEEEeecCCHHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHH-hhC-C-EEEEE
Confidence            67789999999999988763      589999998531                   45567777766 233 5 6776 


Q ss_pred             CCCCCCCCCCCCCCCCccchhhHHHHHHHH---HhCCCCeEEEecCccccc
Q 025054           61 TEYGSNVDAGHPIEPAKSGYARKAKIRRAI---EAEGIPHTYVSCNCSFGF  108 (258)
Q Consensus        61 S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l---~~~~~~~t~lr~~~~~~~  108 (258)
                      ||.......    +....|..+|...+.+.   +..|++.+.|.||.+.+.
T Consensus       663 SS~ag~~g~----~g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~  709 (795)
T 3slk_A          663 SSVSGVLGS----GGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEH  709 (795)
T ss_dssp             EETHHHHTC----SSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCC
T ss_pred             ccHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcc
Confidence            654322211    12456777898776554   347999999999877643

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=94.50  E-value=0.11  Score=36.36  Aligned_cols=56  Identities=16%  Similarity=0.243  Sum_probs=43.2

Q ss_pred             ccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            3 YMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      ...+..++.+|..|.+.+.++ ++++|+||++++.. ......++.+|++.+ +++++.
T Consensus        46 ~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~-~~~~~~~~~~~~~~~-~~~ii~  102 (144)
T 2hmt_A           46 ASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN-IQASTLTTLLLKELD-IPNIWV  102 (144)
T ss_dssp             TTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC-HHHHHHHHHHHHHTT-CSEEEE
T ss_pred             HHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc-hHHHHHHHHHHHHcC-CCeEEE
Confidence            345677889999999888886 78999999998763 123446777888888 887776

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.07  E-value=0.27  Score=43.84  Aligned_cols=139  Identities=9%  Similarity=0.042  Sum_probs=83.1

Q ss_pred             hCCCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccc
Q 025054           24 IKPVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSG   79 (258)
Q Consensus        24 l~g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~   79 (258)
                      +.+.|++||.++...                       +...+.++...++.+ -.++|. ||.......    +....|
T Consensus        89 ~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~----~~~~~Y  163 (604)
T 2et6_A           89 FGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGN----FGQANY  163 (604)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC----TTBHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCC----CCchHH
Confidence            447899999998521                       223345555555555 468887 654322111    123456


Q ss_pred             hhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHh
Q 025054           80 YARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAV  152 (258)
Q Consensus        80 ~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l  152 (258)
                      ..+|+.+..+.+.       .|+.+..|.|+. ...+....       ..  .        ........+|+|.+++.++
T Consensus       164 ~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~T~m~~~~-------~~--~--------~~~~~~~pe~vA~~v~~L~  225 (604)
T 2et6_A          164 ASAKSALLGFAETLAKEGAKYNIKANAIAPLA-RSRMTESI-------MP--P--------PMLEKLGPEKVAPLVLYLS  225 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCHHHHTT-------SC--H--------HHHTTCSHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-cCcccccc-------CC--h--------hhhccCCHHHHHHHHHHHh
Confidence            6799998866543       589999999962 11111000       00  0        0011247899999999998


Q ss_pred             cCCCC-CCceEEEcC-----------------CCCccCHHHHHHHHHHHhC
Q 025054          153 DDPRT-LNKTLYLRP-----------------PKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       153 ~~~~~-~~~~~~l~g-----------------~~~~~t~~e~~~~~~~~~g  185 (258)
                      ..... .|+.+.+.|                 ++...|..++.+.+.++..
T Consensus       226 s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          226 SAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             SSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             CCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence            76532 355555543                 2245789999999988764

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=93.61  E-value=0.2  Score=35.89  Aligned_cols=53  Identities=19%  Similarity=0.214  Sum_probs=41.2

Q ss_pred             CceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHh-CCccEEEc
Q 025054            5 INCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEV-GNIKRFFP   60 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~-g~vk~~v~   60 (258)
                      .|++++.+|.+|++.|.++ ++++|.|+.+++...  ....+...|++. + ..+++.
T Consensus        49 ~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~--~n~~~~~~a~~~~~-~~~ii~  103 (153)
T 1id1_A           49 DNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDA--DNAFVVLSAKDMSS-DVKTVL  103 (153)
T ss_dssp             TTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCHH--HHHHHHHHHHHHTS-SSCEEE
T ss_pred             CCCeEEEcCCCCHHHHHHcChhhCCEEEEecCChH--HHHHHHHHHHHHCC-CCEEEE
Confidence            4789999999999999987 899999999987643  445566677776 5 556654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=93.49  E-value=0.16  Score=35.77  Aligned_cols=55  Identities=15%  Similarity=0.042  Sum_probs=42.7

Q ss_pred             ccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            3 YMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      .+.|+.++.+|.+|++.+.++ ++++|.||.+++..  .....++..+++.+ ..+++.
T Consensus        46 ~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~--~~n~~~~~~a~~~~-~~~iia  101 (141)
T 3llv_A           46 EDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDD--EFNLKILKALRSVS-DVYAIV  101 (141)
T ss_dssp             HHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCH--HHHHHHHHHHHHHC-CCCEEE
T ss_pred             HHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCH--HHHHHHHHHHHHhC-CceEEE
Confidence            345788999999999999887 56899999988743  34556777888888 777765

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=93.21  E-value=0.18  Score=42.70  Aligned_cols=53  Identities=17%  Similarity=0.189  Sum_probs=43.1

Q ss_pred             ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccchhchHHHHHHHHHhCCccEEEcCC
Q 025054            6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTE   62 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~   62 (258)
                      +++.+.+|++|.+++.+++++  +|+||+++++.   ....++++|.++| +..+..+.
T Consensus        54 ~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ag~~---~~~~v~~a~l~~g-~~vvD~a~  108 (405)
T 4ina_A           54 EIDITTVDADSIEELVALINEVKPQIVLNIALPY---QDLTIMEACLRTG-VPYLDTAN  108 (405)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHCCSEEEECSCGG---GHHHHHHHHHHHT-CCEEESSC
T ss_pred             ceEEEEecCCCHHHHHHHHHhhCCCEEEECCCcc---cChHHHHHHHHhC-CCEEEecC
Confidence            478899999999999999987  89999999864   3578899999999 65443333

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=93.10  E-value=0.45  Score=46.59  Aligned_cols=142  Identities=8%  Similarity=0.040  Sum_probs=81.8

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------------CCcEEEEccCccc----------------------hhchHHHHHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------------PVDVVISAVGRTE----------------------VEDQFKLIAAIK   50 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------------g~d~Vi~~~~~~~----------------------~~~~~~li~aa~   50 (258)
                      .+.++.+|++|.+++.++++             +.|++||+++...                      +.+...++.+++
T Consensus       532 ~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~  611 (1688)
T 2pff_A          532 TLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQK  611 (1688)
T ss_dssp             EEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            36788999999988877653             4899999997421                      222334555553


Q ss_pred             HhCC-----ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHH-Hh------CCCCeEEEecCcccc-cCcCCCCCC
Q 025054           51 EVGN-----IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAI-EA------EGIPHTYVSCNCSFG-FFLPTMAQP  116 (258)
Q Consensus        51 ~~g~-----vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l-~~------~~~~~t~lr~~~~~~-~~~~~~~~~  116 (258)
                      ....     -.+||. |+......      ....|..+|+.++.+. +.      ..+.++.|.||++.+ .+...   .
T Consensus       612 ~lp~M~krggGrIVnISSiAG~~G------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~---~  682 (1688)
T 2pff_A          612 SARGIETRPAQVILPMSPNHGTFG------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA---N  682 (1688)
T ss_dssp             HHHTCTTSCEEECCCCCSCTTTSS------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT---T
T ss_pred             hChHHHhCCCCEEEEEEChHhccC------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC---c
Confidence            2210     246777 66433222      2346777999999883 21      126777788887763 32211   0


Q ss_pred             CCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC-C--CCCceEEE
Q 025054          117 GATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R--TLNKTLYL  164 (258)
Q Consensus       117 ~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~--~~~~~~~l  164 (258)
                      ...  . ....     .......+.+|+|.+++.++.+. .  ..|+.+.+
T Consensus       683 e~~--~-~~l~-----~iplR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V  725 (1688)
T 2pff_A          683 NII--A-EGIE-----KMGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  725 (1688)
T ss_dssp             TTC--S-TTTS-----SSSCCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred             hHH--H-HHHH-----hCCCCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            000  0 0000     01112348899999999998765 1  13555554

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=92.93  E-value=0.18  Score=43.26  Aligned_cols=50  Identities=26%  Similarity=0.259  Sum_probs=39.8

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------------hhchHHHHHHHHHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +++.+.+|+.|.+++.++++++|+|||+++...                     .....+++++|+++| ++
T Consensus        48 ~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG-v~  118 (450)
T 1ff9_A           48 HSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG-IT  118 (450)
T ss_dssp             TEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT-CE
T ss_pred             CceEEEeecCCHHHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC-Ce
Confidence            367888999999999999999999999998531                     124578888999998 76

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=92.08  E-value=0.4  Score=36.89  Aligned_cols=53  Identities=19%  Similarity=0.291  Sum_probs=41.7

Q ss_pred             CceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCcc-EEEc
Q 025054            5 INCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIK-RFFP   60 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk-~~v~   60 (258)
                      .|+.++.+|.+|++.|.++ ++++|.||.+++..  .....++..|++.+ ++ ++|.
T Consensus        49 ~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d--~~n~~~~~~a~~~~-~~~~iia  103 (234)
T 2aef_A           49 SGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--SETIHCILGIRKID-ESVRIIA  103 (234)
T ss_dssp             TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCH--HHHHHHHHHHHHHC-SSSEEEE
T ss_pred             cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCc--HHHHHHHHHHHHHC-CCCeEEE
Confidence            5788999999999999988 89999999988764  23455667778877 65 5554

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=91.80  E-value=0.46  Score=32.94  Aligned_cols=52  Identities=25%  Similarity=0.385  Sum_probs=40.4

Q ss_pred             ceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            6 NCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      |+.++.+|..+.+.+.++ ++++|+||++++...  ....+..+++..+ ++++|.
T Consensus        48 ~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~--~~~~~~~~~~~~~-~~~ii~  100 (140)
T 1lss_A           48 DALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE--VNLMSSLLAKSYG-INKTIA  100 (140)
T ss_dssp             SSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH--HHHHHHHHHHHTT-CCCEEE
T ss_pred             CcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch--HHHHHHHHHHHcC-CCEEEE
Confidence            677889999998888766 789999999987642  3345667788888 777776

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=91.46  E-value=0.28  Score=40.15  Aligned_cols=46  Identities=15%  Similarity=0.169  Sum_probs=36.8

Q ss_pred             HHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCC
Q 025054           17 HESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEY   63 (258)
Q Consensus        17 ~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~   63 (258)
                      ..++.++++|+|+||++++...             +...+++++++++.+ ++.+|. ++-
T Consensus        67 t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SN  126 (326)
T 1smk_A           67 QQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISN  126 (326)
T ss_dssp             HHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCS
T ss_pred             CCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECC
Confidence            4567889999999999997542             477889999999998 887776 543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=91.38  E-value=1.3  Score=37.18  Aligned_cols=137  Identities=18%  Similarity=0.117  Sum_probs=78.4

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc---------------------------------------c--
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT---------------------------------------E--   38 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~---------------------------------------~--   38 (258)
                      +..+.+|++|.+++.++++       +.|++||.++..                                       .  
T Consensus       111 a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~  190 (405)
T 3zu3_A          111 AKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPA  190 (405)
T ss_dssp             EEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCC
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCC
Confidence            5678999999988777654       579999987642                                       0  


Q ss_pred             ----------hhc--hH-HHHHHHHHhCCc----cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------C
Q 025054           39 ----------VED--QF-KLIAAIKEVGNI----KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------E   93 (258)
Q Consensus        39 ----------~~~--~~-~li~aa~~~g~v----k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~   93 (258)
                                +..  .. .++.++...+ .    -++|. |+.+......  ......|..+|+.++.+.+.       .
T Consensus       191 t~ee~~~~v~Vn~~~~~~~~~~~~~~~~-m~~~gG~IVniSSi~~~~~~p--~~~~~aY~AaKaal~~ltrsLA~Ela~~  267 (405)
T 3zu3_A          191 TQSEIDSTVAVMGGEDWQMWIDALLDAG-VLAEGAQTTAFTYLGEKITHD--IYWNGSIGAAKKDLDQKVLAIRESLAAH  267 (405)
T ss_dssp             CHHHHHHHHHHHSSHHHHHHHHHHHHHT-CEEEEEEEEEEECCCCGGGTT--TTTTSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHhhchhHHHHHHHHHHHHh-hhhCCcEEEEEeCchhhCcCC--CccchHHHHHHHHHHHHHHHHHHHhCcc
Confidence                      001  11 3445544333 2    25665 6665432211  00124677799999876653       6


Q ss_pred             -CCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcC
Q 025054           94 -GIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDD  154 (258)
Q Consensus        94 -~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~  154 (258)
                       |+.+..+.||.+-......+...     ......+..   ..--+-..+|+++.+..++++
T Consensus       268 ~GIRVNaVaPG~i~T~~s~~ip~~-----p~y~~~l~~---~mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          268 GGGDARVSVLKAVVSQASSAIPMM-----PLYLSLLFK---VMKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             TSCEEEEEECCCCCCHHHHTSTTH-----HHHHHHHHH---HHHHHTCCCCHHHHHHHHHHH
T ss_pred             cCeEEEEEEeCCCcCchhhcCCCC-----cHHHHHHHH---HHhcCCCcHHHHHHHHHHHhc
Confidence             89999999998876543221100     000000000   001134678999999998875

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=90.57  E-value=0.48  Score=34.88  Aligned_cols=56  Identities=11%  Similarity=0.089  Sum_probs=40.6

Q ss_pred             ccCceeEEeccCCCHHHHHHh--hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            3 YMINCLIAQGDLHDHESLVKA--IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~a--l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      .+.|++++.+|.++.+.+.++  ++++|.||.+++...  ....++..++..+...+++.
T Consensus        80 ~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~--~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A           80 RSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQ--GNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             HHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHH--HHHHHHHHHHHTTCCSEEEE
T ss_pred             HHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChH--HHHHHHHHHHHHCCCCEEEE
Confidence            345788899999999999888  889999999877532  34556677777662334443

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=90.29  E-value=0.39  Score=38.88  Aligned_cols=136  Identities=9%  Similarity=0.043  Sum_probs=73.5

Q ss_pred             CCCcEEEEccCcc-----c----------------hhchHHHHHHHHHhC-CccEEEc-CCCCCCCCCCCCCCCC-ccch
Q 025054           25 KPVDVVISAVGRT-----E----------------VEDQFKLIAAIKEVG-NIKRFFP-TEYGSNVDAGHPIEPA-KSGY   80 (258)
Q Consensus        25 ~g~d~Vi~~~~~~-----~----------------~~~~~~li~aa~~~g-~vk~~v~-S~~~~~~~~~~~~~~~-~~~~   80 (258)
                      .+.|++||+++..     .                +.+...+++++...= .-.++|. |+.......    +.. ..|.
T Consensus       119 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----~~~~~~Y~  194 (315)
T 2o2s_A          119 GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVV----PGYGGGMS  194 (315)
T ss_dssp             CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCC----TTCCTTHH
T ss_pred             CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccC----CCccHHHH
Confidence            3789999998732     1                233445555554320 0146776 554332211    112 3577


Q ss_pred             hhHHHHHHHHH--------hCCCCeEEEecCcccccCcCCCCCCCCCCCCC-Cce-EeccCCCceeeeeccchHHHHHHH
Q 025054           81 ARKAKIRRAIE--------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPR-ENI-LFYGDGQPKAIFNKEEDIATYTIK  150 (258)
Q Consensus        81 ~~k~~~e~~l~--------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~g~g~~~~~~v~~~D~a~~~~~  150 (258)
                      .+|+.++.+.+        ..|+.+..|+||++...+...+....  .... ... ...........+...+|+|++++.
T Consensus       195 asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  272 (315)
T 2o2s_A          195 SAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSG--EKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALF  272 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSS--SSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccc--cchhHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Confidence            79998876653        25899999999988765432211000  0000 000 000000000125688999999999


Q ss_pred             HhcCCC--CCCceEEEcC
Q 025054          151 AVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       151 ~l~~~~--~~~~~~~l~g  166 (258)
                      ++.+..  -.|+.+.+.|
T Consensus       273 L~s~~~~~itG~~i~vdG  290 (315)
T 2o2s_A          273 LLSPLARAVSGVTLYVDN  290 (315)
T ss_dssp             HTSGGGTTCCSCEEEEST
T ss_pred             HhCchhccCcCCEEEECC
Confidence            987542  2477788875

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=90.23  E-value=0.77  Score=32.76  Aligned_cols=54  Identities=13%  Similarity=0.261  Sum_probs=40.8

Q ss_pred             cCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHH-hCCccEEEc
Q 025054            4 MINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKE-VGNIKRFFP   60 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~-~g~vk~~v~   60 (258)
                      ..|+.++.+|..+.+.+.++ ++++|+||.+++...  ....++..++. .+ ..+++.
T Consensus        61 ~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~--~~~~~~~~~~~~~~-~~~iv~  116 (155)
T 2g1u_A           61 EFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS--TNFFISMNARYMFN-VENVIA  116 (155)
T ss_dssp             TCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH--HHHHHHHHHHHTSC-CSEEEE
T ss_pred             cCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH--HHHHHHHHHHHHCC-CCeEEE
Confidence            45778888999998888876 789999999987643  34556667776 56 667765

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=90.12  E-value=0.18  Score=41.34  Aligned_cols=43  Identities=21%  Similarity=0.160  Sum_probs=33.4

Q ss_pred             HHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHh-CCcc-EEEc
Q 025054           17 HESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEV-GNIK-RFFP   60 (258)
Q Consensus        17 ~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~-g~vk-~~v~   60 (258)
                      ..++.++++|+|+|||+++...             +...+++++++++. + .+ ++|.
T Consensus        74 ~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~-p~a~ii~  131 (329)
T 1b8p_A           74 HADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVAS-RNIKVLV  131 (329)
T ss_dssp             ESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred             ecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEE
Confidence            3456788999999999998542             46678999999987 4 55 6776

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=89.62  E-value=0.91  Score=39.09  Aligned_cols=32  Identities=31%  Similarity=0.291  Sum_probs=28.3

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRT   37 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~   37 (258)
                      +++.+.+|+.|.+++.++++++|+||++++..
T Consensus        68 ~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~   99 (467)
T 2axq_A           68 GSKAISLDVTDDSALDKVLADNDVVISLIPYT   99 (467)
T ss_dssp             TCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred             CCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence            56778899999999999999999999999864

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=89.52  E-value=0.92  Score=45.56  Aligned_cols=157  Identities=9%  Similarity=0.031  Sum_probs=88.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------------CCcEEEEccCccc----------------------hhchHHHHHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------------PVDVVISAVGRTE----------------------VEDQFKLIAAIK   50 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------------g~d~Vi~~~~~~~----------------------~~~~~~li~aa~   50 (258)
                      .+.++.+|++|.+++.++++             +.|++||+++...                      +.+...++.+++
T Consensus       731 ~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~  810 (1887)
T 2uv8_A          731 TLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQK  810 (1887)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            36788999999998887653             4899999997421                      122234555553


Q ss_pred             HhCC-----ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHH-HH---h---CCCCeEEEecCcccc-cCcCCCCCC
Q 025054           51 EVGN-----IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRA-IE---A---EGIPHTYVSCNCSFG-FFLPTMAQP  116 (258)
Q Consensus        51 ~~g~-----vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~-l~---~---~~~~~t~lr~~~~~~-~~~~~~~~~  116 (258)
                      ....     -.++|. |+......      ....|..+|+.++.+ .+   .   ..+.++.|.||++.+ .+...   .
T Consensus       811 ~lp~m~~~~~G~IVnISS~ag~~g------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~---~  881 (1887)
T 2uv8_A          811 SARGIETRPAQVILPMSPNHGTFG------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA---N  881 (1887)
T ss_dssp             HTTTCCSCCEEEEEEECSCTTCSS------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC--------C
T ss_pred             hhhhhhhCCCCEEEEEcChHhccC------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccccccccc---c
Confidence            3221     147887 66543322      134577799998887 22   1   128899999998873 33211   0


Q ss_pred             CCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC-C--CCCceEEE---cCCCCccCHHHHHHH
Q 025054          117 GATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R--TLNKTLYL---RPPKNIYSFKELVAL  179 (258)
Q Consensus       117 ~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~--~~~~~~~l---~g~~~~~t~~e~~~~  179 (258)
                      .   .....+  -.   ....+.+.+|+|.+++.++.+. .  ..|+.+.+   +|-.....+.++...
T Consensus       882 ~---~~~~~~--~~---~plr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~  942 (1887)
T 2uv8_A          882 N---IIAEGI--EK---MGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAK  942 (1887)
T ss_dssp             C---TTHHHH--HT---TSCCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHH
T ss_pred             h---hHHHHH--Hh---cCCCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHH
Confidence            0   000000  00   1112448899999999988764 1  13556665   332223345555443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=88.97  E-value=2.3  Score=36.05  Aligned_cols=138  Identities=10%  Similarity=-0.044  Sum_probs=77.9

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc------------------------------------------
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT------------------------------------------   37 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~------------------------------------------   37 (258)
                      +..+.+|++|.+++.++++       +.|++||.++..                                          
T Consensus       125 ~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~  204 (418)
T 4eue_A          125 AKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSA  204 (418)
T ss_dssp             EEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBC
T ss_pred             EEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCC
Confidence            6778999999988777654       579999987652                                          


Q ss_pred             c---hhc--------h-HHHHHHHHHhCCc----cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------h-
Q 025054           38 E---VED--------Q-FKLIAAIKEVGNI----KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------A-   92 (258)
Q Consensus        38 ~---~~~--------~-~~li~aa~~~g~v----k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~-   92 (258)
                      .   ...        . ..++.++...+ +    -++|. |+.+......  ......|..+|+.++.+.+       . 
T Consensus       205 t~e~~~~~~~vn~~~~~~~~~~~l~~~~-~~~~gg~IV~iSSi~~~~~~p--~~~~~aY~ASKaAL~~ltrsLA~ELa~~  281 (418)
T 4eue_A          205 SIEEIEETRKVMGGEDWQEWCEELLYED-CFSDKATTIAYSYIGSPRTYK--IYREGTIGIAKKDLEDKAKLINEKLNRV  281 (418)
T ss_dssp             CHHHHHHHHHHHSSHHHHHHHHHHHHTT-CEEEEEEEEEEECCCCGGGTT--TTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHh-hhcCCcEEEEEeCchhcCCCC--ccccHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            0   000        0 13445554433 2    24665 6655432211  1112456779999876553       3 


Q ss_pred             CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054           93 EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus        93 ~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      .|+.+.++.||.+-......+......  ........+      ..-..+|+++.+..++++.
T Consensus       282 ~GIrVN~V~PG~v~T~~s~~ip~~p~y--~~~~~~~mk------~~G~~E~v~e~~~~L~sd~  336 (418)
T 4eue_A          282 IGGRAFVSVNKALVTKASAYIPTFPLY--AAILYKVMK------EKNIHENCIMQIERMFSEK  336 (418)
T ss_dssp             HSCEEEEEECCCCCCHHHHTSTTHHHH--HHHHHHHHH------HTTCCCCHHHHHHHHHHHT
T ss_pred             cCeEEEEEECCcCcChhhhcCCCCcHH--HHHHHHHHh------hcCChHHHHHHHHHHhhcc
Confidence            589999999998876543221100000  000000010      1235789999999988754

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=88.82  E-value=0.56  Score=38.32  Aligned_cols=54  Identities=19%  Similarity=0.275  Sum_probs=42.0

Q ss_pred             cCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCcc-EEEc
Q 025054            4 MINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIK-RFFP   60 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk-~~v~   60 (258)
                      +.|+.++.||.+|++.|.++ ++++|.|+.+.+.+  .....++..|++.+ ++ +++.
T Consensus       154 ~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d--~~n~~~~~~ar~~~-~~~~iia  209 (336)
T 1lnq_A          154 RSGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--SETIHCILGIRKID-ESVRIIA  209 (336)
T ss_dssp             HTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSH--HHHHHHHHHHHTTC-TTSEEEE
T ss_pred             hCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCcc--HHHHHHHHHHHHHC-CCCeEEE
Confidence            46889999999999999988 89999999888754  34555666777777 65 5554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=87.76  E-value=1.5  Score=33.27  Aligned_cols=53  Identities=26%  Similarity=0.370  Sum_probs=40.8

Q ss_pred             CceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHH-hCCccEEEc
Q 025054            5 INCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKE-VGNIKRFFP   60 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~-~g~vk~~v~   60 (258)
                      .|+.++.+|.+|++.|.++ ++++|.||.+++...  ....+...|++ .+ ..++|.
T Consensus        43 ~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~--~n~~~~~~a~~~~~-~~~iia   97 (218)
T 3l4b_C           43 LKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE--VNLFIAQLVMKDFG-VKRVVS   97 (218)
T ss_dssp             SSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH--HHHHHHHHHHHTSC-CCEEEE
T ss_pred             cCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH--HHHHHHHHHHHHcC-CCeEEE
Confidence            4788999999999999987 889999998887653  33445556665 57 777775

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=87.59  E-value=0.42  Score=38.84  Aligned_cols=39  Identities=23%  Similarity=0.147  Sum_probs=31.0

Q ss_pred             HHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc
Q 025054           20 LVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus        20 l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      +.++++|+|+|||+++...             +...+++++++++.+  +.+|.
T Consensus        68 l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vl  119 (313)
T 1hye_A           68 NLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIF  119 (313)
T ss_dssp             CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEE
T ss_pred             hHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEE
Confidence            5678999999999998542             577889999999986  44444

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=86.99  E-value=1.4  Score=30.71  Aligned_cols=55  Identities=9%  Similarity=0.050  Sum_probs=37.9

Q ss_pred             ccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEE
Q 025054            3 YMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v   59 (258)
                      ++.|+.++.+|.++++.|.++ ++++|.|+.+++...  ....++..+++.....++|
T Consensus        47 ~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~--~n~~~~~~a~~~~~~~~ii  102 (140)
T 3fwz_A           47 RERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY--EAGEIVASARAKNPDIEII  102 (140)
T ss_dssp             HHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH--HHHHHHHHHHHHCSSSEEE
T ss_pred             HHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH--HHHHHHHHHHHHCCCCeEE
Confidence            346889999999999998876 678999998887643  2333455566543133444

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=86.83  E-value=1.8  Score=43.47  Aligned_cols=157  Identities=7%  Similarity=-0.006  Sum_probs=87.5

Q ss_pred             eeEEeccCCCHHHHHHhhC-----------CCcEEEEccCccc----------------------hhchHHHHHHHHHhC
Q 025054            7 CLIAQGDLHDHESLVKAIK-----------PVDVVISAVGRTE----------------------VEDQFKLIAAIKEVG   53 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-----------g~d~Vi~~~~~~~----------------------~~~~~~li~aa~~~g   53 (258)
                      +.++.+|++|.+++.++++           +.|+|||+++...                      +.+..+++.+++...
T Consensus       709 v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp  788 (1878)
T 2uv9_A          709 LVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKER  788 (1878)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            6788999999998887653           4899999997421                      112223444422211


Q ss_pred             C-----ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCccc-ccCcCCCCCCCCC
Q 025054           54 N-----IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSF-GFFLPTMAQPGAT  119 (258)
Q Consensus        54 ~-----vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~-~~~~~~~~~~~~~  119 (258)
                      .     -.+||. |+......      ....|..+|+.++.+.+.       .++.++.|.||++- ..+....   .  
T Consensus       789 ~M~~~~~G~IVnISS~ag~~g------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~---~--  857 (1878)
T 2uv9_A          789 GYETRPAQVILPLSPNHGTFG------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN---N--  857 (1878)
T ss_dssp             TCCSCCEEECCEECSCSSSSS------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH---H--
T ss_pred             HHHhCCCCEEEEEcchhhccC------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc---h--
Confidence            0     246776 66433222      134677799998876432       23888999999876 3322110   0  


Q ss_pred             CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC---CCCceEEE---cCCCCccCHHHHHHHH
Q 025054          120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR---TLNKTLYL---RPPKNIYSFKELVALW  180 (258)
Q Consensus       120 ~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~---~~~~~~~l---~g~~~~~t~~e~~~~~  180 (258)
                       ... .  ....  ....+.+.+|+|.+++.++.+..   ..|..+.+   +|-.....+.++...+
T Consensus       858 -~~~-~--~~~~--~plr~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          858 -LVA-E--GVEK--LGVRTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             -HTH-H--HHHT--TTCCCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             -hhH-H--HHHh--cCCCCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence             000 0  0000  01123488999999998886542   13566665   2211224455655444

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=85.81  E-value=1.1  Score=37.92  Aligned_cols=54  Identities=19%  Similarity=0.230  Sum_probs=42.0

Q ss_pred             ccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCcc-EEE
Q 025054            3 YMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIK-RFF   59 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk-~~v   59 (258)
                      +..|+.++.||.++++.|.++ +++++.||.+.+..  .....++..|++.+ .+ ++|
T Consensus        44 ~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~--~~n~~i~~~ar~~~-p~~~Ii   99 (413)
T 3l9w_A           44 RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDP--QTNLQLTEMVKEHF-PHLQII   99 (413)
T ss_dssp             HHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSH--HHHHHHHHHHHHHC-TTCEEE
T ss_pred             HhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCCh--HHHHHHHHHHHHhC-CCCeEE
Confidence            456889999999999999988 88999999988754  34566777777776 54 444

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=85.51  E-value=0.87  Score=36.75  Aligned_cols=41  Identities=15%  Similarity=0.065  Sum_probs=32.8

Q ss_pred             HHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CC
Q 025054           21 VKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TE   62 (258)
Q Consensus        21 ~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~   62 (258)
                      .++++|+|+|||+++...             +...+++++++++.+ .+.+|. ++
T Consensus        65 ~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~S  119 (303)
T 1o6z_A           65 YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTS  119 (303)
T ss_dssp             GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECC
T ss_pred             HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeC
Confidence            347899999999998542             467889999999998 887776 54

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=82.69  E-value=2.5  Score=44.14  Aligned_cols=97  Identities=13%  Similarity=0.116  Sum_probs=65.9

Q ss_pred             eeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEEEc
Q 025054            7 CLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRFFP   60 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~v~   60 (258)
                      +.++.+|++|.+++.++++      ..|+|||.++...                   +.+..++.+++...- ...+||.
T Consensus      1939 v~~~~~Dvsd~~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~ 2018 (2512)
T 2vz8_A         1939 VLVSTSNASSLDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVI 2018 (2512)
T ss_dssp             EEEECCCSSSHHHHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred             EEEEecCCCCHHHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEE
Confidence            5678899999998877664      5799999998521                   456667767665531 1457887


Q ss_pred             -CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---hCCCCeEEEecCcccc
Q 025054           61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---AEGIPHTYVSCNCSFG  107 (258)
Q Consensus        61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~~~~~t~lr~~~~~~  107 (258)
                       ||.......    +....|..+|+.++.+.+   +.|++.+.+..|.+-+
T Consensus      2019 iSS~ag~~g~----~g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2019 FSSVSCGRGN----AGQANYGFANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             ECCHHHHTTC----TTCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred             ecchhhcCCC----CCcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence             764332211    124567779999987665   5799988888776544

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=82.17  E-value=2.8  Score=35.46  Aligned_cols=71  Identities=6%  Similarity=-0.149  Sum_probs=41.0

Q ss_pred             ccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHH
Q 025054           77 KSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTI  149 (258)
Q Consensus        77 ~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~  149 (258)
                      ..|..+|+.++.+.+.       .|+.+..|.||.+-......+......  ........+      ..-..+|+++.+.
T Consensus       259 ~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip~~~~~--~~~~~~~m~------r~G~pEdva~~v~  330 (422)
T 3s8m_A          259 GALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPVMPLY--ISMVYKIMK------EKGLHEGTIEQLD  330 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTHHHHH--HHHHHHHHH------HTTCCCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCCCChHH--HHHHHhhhc------CCcChHHHHHHHH
Confidence            3456799999876543       689999999998876543321000000  000000000      1235689999999


Q ss_pred             HHhcCC
Q 025054          150 KAVDDP  155 (258)
Q Consensus       150 ~~l~~~  155 (258)
                      .++++.
T Consensus       331 ~L~sd~  336 (422)
T 3s8m_A          331 RLFRER  336 (422)
T ss_dssp             HHHHHT
T ss_pred             HHhcch
Confidence            988653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	258
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-40
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-36
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-04

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score =  139 bits (351), Expect = 2e-40
 Identities = 154/253 (60%), Positives = 191/253 (75%), Gaps = 1/253 (0%)

Query: 6   NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGS 65
              I  G + DH SLV+A+K VDVVIS VG  ++E Q  +I AIKEVG +KRFFP+E+G+
Sbjct: 56  GANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN 115

Query: 66  NVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125
           +VD  H +EPAKS +  KAK+RRAIEAEGIP+TYVS NC  G+FL ++AQ G TAPPR+ 
Sbjct: 116 DVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDK 175

Query: 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG 185
           ++  GDG  + +F KEEDI T+TIKAVDDPRTLNKTLYLR P N  S  ELVALWEKKI 
Sbjct: 176 VVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 235

Query: 186 KTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDV 245
           KTLEK YV E+++L++I D      I + ++ SIF+KG+QTNFEI P +GVEAS+LYPDV
Sbjct: 236 KTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGP-AGVEASQLYPDV 294

Query: 246 DYATVEEYLDQFV 258
            Y TV+EYL  FV
Sbjct: 295 KYTTVDEYLSNFV 307

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score =  129 bits (325), Expect = 1e-36
 Identities = 118/259 (45%), Positives = 172/259 (66%), Gaps = 7/259 (2%)

Query: 6   NCLIAQGDLHDHESLVKAIKPVDVVISAVGRT----EVEDQFKLIAAIKEVGNIKRFFPT 61
              + +  L DH+ LV A+K VDVVISA+        + +Q KL+ AIKE GNIKRF P+
Sbjct: 55  GAKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPS 114

Query: 62  EYGSNVDA-GHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQ-PGAT 119
           E+G + D   H ++P    +  K K+RRAIEA  IP+TYVS N   G+F  ++AQ  G  
Sbjct: 115 EFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHM 174

Query: 120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVAL 179
            PPR+ +L YGDG  K I+  E+D+ TYTIK++DDP+TLNKT+Y+RPP NI S KE++ +
Sbjct: 175 MPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQI 234

Query: 180 WEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEAS 239
           WE+   + L+KIY++    L  ++D S E+KI+    + IF +G+  NFEI P + +EA+
Sbjct: 235 WERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGP-NAIEAT 293

Query: 240 ELYPDVDYATVEEYLDQFV 258
           +LYP+V Y T++ YL+++V
Sbjct: 294 KLYPEVKYVTMDSYLERYV 312

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 3e-04
 Identities = 18/166 (10%), Positives = 45/166 (27%), Gaps = 8/166 (4%)

Query: 1   MLYMINCLIAQGDLHDHESLVKAIKPVDVVISAVG-RTEVEDQFKLIAAIKEVGNIKRFF 59
                   +  GD+     + K +   D VI  +G R ++     +    + +    +  
Sbjct: 42  SEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAH 101

Query: 60  PTEYGSNVDAGHPI-EPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGA 118
             +      +   + +P K     +A     I               +   +P       
Sbjct: 102 GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMH---KVLRESGLKYVAVMPPHIGDQ- 157

Query: 119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYL 164
             P         DG+  +    + D+  + ++ +        + Y 
Sbjct: 158 --PLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	258
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	100.0
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.88
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.85
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.84
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.83
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.81
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.8
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.8
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.77
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.76
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.76
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.75
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.72
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.72
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.71
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.69
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.68
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.68
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.65
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.65
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.63
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.6
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.59
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.49
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.3
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.22
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.17
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.31
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.28
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	98.23
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.11
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.1
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.06
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.05
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.01
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.97
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.97
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.96
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.96
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.95
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.93
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.92
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.9
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.9
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.87
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.86
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.86
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.82
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.81
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.79
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.77
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.77
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.74
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.7
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.61
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.6
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.6
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.47
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.41
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.36
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.3
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.25
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.23
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.22
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.22
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.19
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.17
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.16
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.16
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.07
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.05
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.03
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.96
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.93
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.8
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	96.69
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	95.76
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.66
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.6
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.25
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	95.23
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	94.97
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	94.04
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	93.76
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	92.79
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	92.65
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	90.82
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	90.74
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	90.34
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	90.05
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	88.82
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	88.1
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	86.52
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	86.0
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	84.98
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	83.12
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	82.96
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	81.84

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=100.00  E-value=1.8e-32  Score=224.70  Aligned_cols=255  Identities=46%  Similarity=0.822  Sum_probs=204.7

Q ss_pred             ccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCCCCCCCCC-CCCCCCc
Q 025054            3 YMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAG-HPIEPAK   77 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~-~~~~~~~   77 (258)
                      ...+++++++|+.|.+++.+++++++.++++++...    .....+++++|++++.++++++|+++.+.... .+..+..
T Consensus        52 ~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~  131 (312)
T d1qyda_          52 KQLGAKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGS  131 (312)
T ss_dssp             HTTTCEEECCCSSCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTT
T ss_pred             ccCCcEEEEeecccchhhhhhccCcchhhhhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhh
Confidence            456899999999999999999999999999987643    66788999999998746666669887755432 2334556


Q ss_pred             cchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCC-CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054           78 SGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGA-TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus        78 ~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      .++..+..++++.++.+++|+++|++.+||++.+.+..... .....+.+.++++|++.++||+++|+|++++.++.+++
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~  211 (312)
T d1qyda_         132 ITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ  211 (312)
T ss_dssp             HHHHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG
T ss_pred             hhhHHHHHHHHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCcc
Confidence            67778999999999999999999999999976554322211 12345567888999999999999999999999999987


Q ss_pred             CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhhheeeeeEEEecCCccccCCCCCcc
Q 025054          157 TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGV  236 (258)
Q Consensus       157 ~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~  236 (258)
                      ..++.+++.++++.+|++|+++.+++++|++.+++.+|.+++.+.+...++|........+.++..|...++.+.+. ..
T Consensus       212 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  290 (312)
T d1qyda_         212 TLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPN-AI  290 (312)
T ss_dssp             GSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHHHHHHHTTSCTTHHHHTTTHHHHTTSCTTTSSCCCSS-EE
T ss_pred             ccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHHHHHHHHHhcCCcHhHHHHHHHHHHhcCcccccccCcc-hh
Confidence            78888777666678999999999999999999999999999988888888887766555555556666555555543 35


Q ss_pred             cccccCCCCcccCHHHHHhhhC
Q 025054          237 EASELYPDVDYATVEEYLDQFV  258 (258)
Q Consensus       237 ~~~~~~~~~~~~s~ee~l~~~~  258 (258)
                      +..+++|++++||++|||++++
T Consensus       291 ea~~l~Pd~~~tt~~e~l~~~v  312 (312)
T d1qyda_         291 EATKLYPEVKYVTMDSYLERYV  312 (312)
T ss_dssp             EHHHHCTTSCCCCHHHHHTTTC
T ss_pred             hHHHhCCCCCcCcHHHHHHhhC
Confidence            6678899999999999999985

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=100.00  E-value=2.8e-32  Score=222.51  Aligned_cols=253  Identities=59%  Similarity=0.947  Sum_probs=206.5

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhh
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYAR   82 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~   82 (258)
                      ..+++++.+|+.+...+.+++++++.|+|+++........+++++++.++ ++++++ |+++..........+...++..
T Consensus        54 ~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  132 (307)
T d1qyca_          54 ASGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVG-TVKRFFPSEFGNDVDNVHAVEPAKSVFEV  132 (307)
T ss_dssp             TTTCEEECCCTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHC-CCSEEECSCCSSCTTSCCCCTTHHHHHHH
T ss_pred             cCCcEEEEeecccchhhhhhhhhceeeeecccccccchhhHHHHHHHHhc-cccceeeeccccccccccccccccccccc
Confidence            46799999999999999999999999999998888888999999999999 877777 8877655544333334455668


Q ss_pred             HHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceE
Q 025054           83 KAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTL  162 (258)
Q Consensus        83 k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~  162 (258)
                      +..++.++++.+++++++||+.+||++.+.+..+.......+...+++++++.+++|+++|+|++++.++.+++..++.+
T Consensus       133 ~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  212 (307)
T d1qyca_         133 KAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTL  212 (307)
T ss_dssp             HHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEE
T ss_pred             cccccchhhccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCcee
Confidence            88899999999999999999999997765543333233445567788899999999999999999999999987788888


Q ss_pred             EEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhhheeeeeEEEecCCccccCCCCCcccccccC
Q 025054          163 YLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELY  242 (258)
Q Consensus       163 ~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~  242 (258)
                      ++.++++.+|+.|+++.+++++|.++++..+|.+++.+.+...+.|........+.++.+|...++.+.+. ..+..+++
T Consensus       213 ~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~  291 (307)
T d1qyca_         213 YLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLY  291 (307)
T ss_dssp             ECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHHHHHHHHTSCTTHHHHHHHHHHHHTTCTTTSSCCCTT-EEEHHHHC
T ss_pred             EEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccCcc-hhhHHHhC
Confidence            77666779999999999999999999999999999999888888877665554455555666555555443 35667889


Q ss_pred             CCCcccCHHHHHhhhC
Q 025054          243 PDVDYATVEEYLDQFV  258 (258)
Q Consensus       243 ~~~~~~s~ee~l~~~~  258 (258)
                      |++++||+||||++++
T Consensus       292 P~~~~~t~ee~l~~~v  307 (307)
T d1qyca_         292 PDVKYTTVDEYLSNFV  307 (307)
T ss_dssp             TTCCCCCHHHHHHTTC
T ss_pred             CCCCcCcHHHHHHHhC
Confidence            9999999999999985

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4e-22  Score=153.51  Aligned_cols=151  Identities=14%  Similarity=0.124  Sum_probs=121.5

Q ss_pred             ccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCC
Q 025054            3 YMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPI   73 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~   73 (258)
                      ...+++++.+|++|.+++.++++|+|+|||+++...        ..++++++++|+++| ++|||+ |+.+.........
T Consensus        44 ~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~~  122 (205)
T d1hdoa_          44 GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVP  122 (205)
T ss_dssp             SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSC
T ss_pred             cccccccccccccchhhHHHHhcCCCEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCcccc
Confidence            457899999999999999999999999999997642        567899999999999 999998 7766543322211


Q ss_pred             CCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhc
Q 025054           74 EPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVD  153 (258)
Q Consensus        74 ~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~  153 (258)
                      +...+++..|..+|+++++++++||+|||+.+++...            .+...+..++..+..+|+++|+|++++.+++
T Consensus       123 ~~~~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~  190 (205)
T d1hdoa_         123 PRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPL------------TGAYTVTLDGRGPSRVISKHDLGHFMLRCLT  190 (205)
T ss_dssp             GGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCC------------CSCCEEESSSCSSCSEEEHHHHHHHHHHTTS
T ss_pred             ccccccchHHHHHHHHHHhcCCceEEEecceecCCCC------------cccEEEeeCCCCCCCcCCHHHHHHHHHHHhC
Confidence            1223567789999999999999999999999987432            1233445566778889999999999999999


Q ss_pred             CCCCCCceEEEcC
Q 025054          154 DPRTLNKTLYLRP  166 (258)
Q Consensus       154 ~~~~~~~~~~l~g  166 (258)
                      +++..|+.+++++
T Consensus       191 ~~~~~g~~~~~s~  203 (205)
T d1hdoa_         191 TDEYDGHSTYPSH  203 (205)
T ss_dssp             CSTTTTCEEEEEC
T ss_pred             CCCCCCEEEecCC
Confidence            9987899998873

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.85  E-value=2.7e-20  Score=154.47  Aligned_cols=188  Identities=14%  Similarity=0.105  Sum_probs=145.0

Q ss_pred             cCceeEEeccCCCH-HHHHHhhCCCcEEEEccCcc---chhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCcc
Q 025054            4 MINCLIAQGDLHDH-ESLVKAIKPVDVVISAVGRT---EVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKS   78 (258)
Q Consensus         4 ~~gv~~~~~D~~d~-~~l~~al~g~d~Vi~~~~~~---~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~   78 (258)
                      ..|++++.+|+.|. +.+..+++++|++++.....   ....++++++||+++| ++++++ |+.+......  ..+..+
T Consensus        48 ~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~--~~~~~~  124 (350)
T d1xgka_          48 IPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYG--PWPAVP  124 (350)
T ss_dssp             STTEEEEESCCTTCHHHHHHHHTTCSEEEECCCSTTSCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTS--SCCCCT
T ss_pred             cCCCEEEEeeCCCcHHHHHHHhcCCceEEeecccccchhhhhhhHHHHHHHHhC-CCceEEEeeccccccCC--cccchh
Confidence            36899999999874 56788999999998877643   2678899999999999 766665 7765432221  124567


Q ss_pred             chhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCC-CCCCC--CceEeccCCCceeeeecc-chHHHHHHHHhcC
Q 025054           79 GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGA-TAPPR--ENILFYGDGQPKAIFNKE-EDIATYTIKAVDD  154 (258)
Q Consensus        79 ~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~g~g~~~~~~v~~-~D~a~~~~~~l~~  154 (258)
                      +++.|...++++++.+++++++|+++||+++......... .....  .....+.+++.+++++++ +|+|++++.++.+
T Consensus       125 ~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~  204 (350)
T d1xgka_         125 MWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKD  204 (350)
T ss_dssp             TTHHHHHHHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhC
Confidence            8899999999999999999999999999987543221111 01112  234566778889999986 7999999999976


Q ss_pred             C--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHH
Q 025054          155 P--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTED  196 (258)
Q Consensus       155 ~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~  196 (258)
                      +  +..|+.|+++|  +.+|++|+++++++++|+++++.++|.+
T Consensus       205 ~~~~~~G~~~~~~g--~~~T~~eia~~l~~~~G~~v~~~~vp~~  246 (350)
T d1xgka_         205 GPQKWNGHRIALTF--ETLSPVQVCAAFSRALNRRVTYVQVPKV  246 (350)
T ss_dssp             CHHHHTTCEEEECS--EEECHHHHHHHHHHHHTSCEEEEECSSC
T ss_pred             ChhhcCCeEEEEeC--CcCCHHHHHHHHHHHHCCcceEEECCHH
Confidence            4  34688999985  4899999999999999999999999854

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.4e-20  Score=155.69  Aligned_cols=190  Identities=20%  Similarity=0.225  Sum_probs=139.3

Q ss_pred             cCceeEEeccCCCHHHHH-HhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEcCC---CC
Q 025054            4 MINCLIAQGDLHDHESLV-KAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFPTE---YG   64 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~-~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~S~---~~   64 (258)
                      ..+++++.+|+++.+.+. .+++++|+|||+++...               +.++.+++++|.+.+ ++.++.|+   ++
T Consensus        44 ~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~~~~~~ss~~~~~  122 (342)
T d2blla1          44 HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYG  122 (342)
T ss_dssp             CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGB
T ss_pred             CCCeEEEECccCChHHHHHHHHhCCCccccccccccccccccCCcccccccccccccccccccccc-ccccccccccccc
Confidence            467899999998765554 47789999999998632               678899999999999 88777643   22


Q ss_pred             CCCCC-----------CCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCC----------
Q 025054           65 SNVDA-----------GHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGAT----------  119 (258)
Q Consensus        65 ~~~~~-----------~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~----------  119 (258)
                      .....           .....|...|..+|..+|++++.    .+++++++|++.+++............          
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~  202 (342)
T d2blla1         123 MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL  202 (342)
T ss_dssp             TCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHH
T ss_pred             cccccccccccccccccccCCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHH
Confidence            21110           11112334466699999999865    589999999999999654332111100          


Q ss_pred             -CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          120 -APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       120 -~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                       ...++.+.++|+|++.++++|++|+++++..+++++  +..+++||+++++..+|++|+++.+.+.+|.......++
T Consensus       203 ~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~  280 (342)
T d2blla1         203 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFP  280 (342)
T ss_dssp             HHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSC
T ss_pred             HHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccC
Confidence             012456788999999999999999999999999875  346889999765556899999999999998765544443

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.83  E-value=1.8e-20  Score=153.92  Aligned_cols=183  Identities=17%  Similarity=0.258  Sum_probs=145.0

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGS   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~   65 (258)
                      .+++++.+|..+...+...+.+.|.|+|+++...               +.++.+++++|++.+ +++||+ |+   +|.
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~  133 (322)
T d1r6da_          55 PRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGS  133 (322)
T ss_dssp             TTEEEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCC
T ss_pred             CCeEEEEeccccchhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecC
Confidence            4689999999999999999999999999986542               577899999999999 999998 54   332


Q ss_pred             C----CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC--C-CCCCCCCCCCCceEeccCCCc
Q 025054           66 N----VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT--M-AQPGATAPPRENILFYGDGQP  134 (258)
Q Consensus        66 ~----~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~g~g~~  134 (258)
                      .    ..+..+..|.++|..+|...|.+++.    .+++++++|++.+||+....  + ..+......++.+.++|+|++
T Consensus       134 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~  213 (322)
T d1r6da_         134 IDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGAN  213 (322)
T ss_dssp             CSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCC
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCe
Confidence            1    12233455677888899999998864    58999999999999965321  0 000000123456888999999


Q ss_pred             eeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCccee
Q 025054          135 KAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEK  190 (258)
Q Consensus       135 ~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~  190 (258)
                      .++|+|++|+|+++..+++++. .++.|++++ ++.+|+.|+++.+.+.+|.+.+.
T Consensus       214 ~r~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~~  267 (322)
T d1r6da_         214 VREWVHTDDHCRGIALVLAGGR-AGEIYHIGG-GLELTNRELTGILLDSLGADWSS  267 (322)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHCC-TTCEEEECC-CCEEEHHHHHHHHHHHHTCCGGG
T ss_pred             EEccEEHHHHHHHHHHHHhCCC-CCCeeEEee-cccchhHHHHHHHHHHhCCCccc
Confidence            9999999999999999998764 678999986 67999999999999999987543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=3.2e-20  Score=154.52  Aligned_cols=185  Identities=16%  Similarity=0.158  Sum_probs=139.4

Q ss_pred             CceeEEeccCCCHHHHHHhhCCC--cEEEEccCccc---------------hhchHHHHHHHHHhC--CccEEEc-CC--
Q 025054            5 INCLIAQGDLHDHESLVKAIKPV--DVVISAVGRTE---------------VEDQFKLIAAIKEVG--NIKRFFP-TE--   62 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~--d~Vi~~~~~~~---------------~~~~~~li~aa~~~g--~vk~~v~-S~--   62 (258)
                      .+++++++|++|.+++.++++++  |+|||+++...               +.++.+|++||++.+  +++|||+ |+  
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~  134 (357)
T d1db3a_          55 PKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE  134 (357)
T ss_dssp             CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred             CCeEEEEeecCCHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchh
Confidence            46889999999999999999965  99999987531               677899999999976  1347998 54  


Q ss_pred             -CCCCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC-------CCCCCCce
Q 025054           63 -YGSNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA-------TAPPRENI  126 (258)
Q Consensus        63 -~~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~-------~~~~~~~~  126 (258)
                       ||...    ++..+..|.++|..+|..+|++++.    .++++|++||+.+||+..........       ........
T Consensus       135 vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~  214 (357)
T d1db3a_         135 LYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESC  214 (357)
T ss_dssp             GGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCC
T ss_pred             hhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCce
Confidence             44321    1233445677888899999998865    58999999999999974321100000       00112234


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY  192 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~  192 (258)
                      ..+|+|++.+++++++|+++++..+++.+  .++.|++++ ++.+|++|+++.+.+.+|.......
T Consensus       215 ~~~g~~~~~r~~~~v~D~~~a~~~~~~~~--~~~~yni~s-g~~~s~~~~~~~~~~~~g~~~~~~~  277 (357)
T d1db3a_         215 LYLGNMDSLRDWGHAKDYVKMQWMMLQQE--QPEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRFEG  277 (357)
T ss_dssp             EEESCTTCEECCEEHHHHHHHHHHTTSSS--SCCCEEECC-CCCEEHHHHHHHHHHTTTEEEEEES
T ss_pred             EEECCCCeeecceeechHHHHHHHHHhCC--CCCeEEECC-CCceehHHHHHHHHHHhCCcccccc
Confidence            56788999999999999999999998765  578899986 5699999999999999997665543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.80  E-value=3.1e-19  Score=148.72  Aligned_cols=186  Identities=17%  Similarity=0.167  Sum_probs=143.8

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------------hhchHHHHHHHHHhCCccEEEc-CCCCCC-
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN-   66 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~-   66 (258)
                      ...++..+|+.|.+.+.++++++|+|||+++...                +.++.+++++|++.+ ++|||+ |+.... 
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~  136 (363)
T d2c5aa1          58 FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYP  136 (363)
T ss_dssp             TCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSC
T ss_pred             ccCcEEEeechhHHHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhC-cccccccccccccc
Confidence            3467888999999999999999999999996432                567899999999999 999998 553221 


Q ss_pred             --CC-----------CCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCC--------CC
Q 025054           67 --VD-----------AGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGAT--------AP  121 (258)
Q Consensus        67 --~~-----------~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~--------~~  121 (258)
                        ..           +..+..|.++|..+|..+|++++.    .+++++++|++.+||...+........        ..
T Consensus       137 ~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~  216 (363)
T d2c5aa1         137 EFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQT  216 (363)
T ss_dssp             GGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHH
T ss_pred             ccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCccccccccccccccccccc
Confidence              10           111234566788899999998864    589999999999999654322111100        01


Q ss_pred             CCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          122 PRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       122 ~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      .......+|+|.+.++|+|++|+++++..+++.+  .++.|++++ ++.+|+.|+++.+.+.+|.+.++..++
T Consensus       217 ~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~--~~~~~ni~~-~~~~s~~~l~~~i~~~~g~~~~i~~~~  286 (363)
T d2c5aa1         217 STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGS-DEMVSMNEMAEMVLSFEEKKLPIHHIP  286 (363)
T ss_dssp             CSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS--CCSCEEECC-CCCEEHHHHHHHHHHTTTCCCCEEEEC
T ss_pred             ccccccccCCCCeEEEEeehhHHHHHHHHHHhCC--CCCeEEEec-CCcccHHHHHHHHHHHhCCCCceEeCC
Confidence            2335677889999999999999999999998765  678899997 569999999999999999888776654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=1.2e-18  Score=143.80  Aligned_cols=189  Identities=15%  Similarity=0.184  Sum_probs=140.1

Q ss_pred             cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCC-
Q 025054            4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYG-   64 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~-   64 (258)
                      ..+++++++|++|.+.+.++++  ++|+|||+|+...               +.++++++++|++.+ +++||+ |+.. 
T Consensus        49 ~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~v  127 (338)
T d1udca_          49 GKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATV  127 (338)
T ss_dssp             TSCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGG
T ss_pred             CCCCEEEEeecCCHHHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceE
Confidence            3578999999999999999998  8999999997531               678899999999999 999998 5422 


Q ss_pred             --CCCC-----CCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCC------CCC-------
Q 025054           65 --SNVD-----AGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQP------GAT-------  119 (258)
Q Consensus        65 --~~~~-----~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~------~~~-------  119 (258)
                        ....     ......|..+|..+|...|+++.+     .+++++++|++.+||...+.....      ...       
T Consensus       128 y~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~  207 (338)
T d1udca_         128 YGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQV  207 (338)
T ss_dssp             GCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHH
T ss_pred             EccccccccccccccCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHH
Confidence              1111     112234667788899999998874     479999999999999643211000      000       


Q ss_pred             -CCCCCceEecc------CCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCccee
Q 025054          120 -APPRENILFYG------DGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEK  190 (258)
Q Consensus       120 -~~~~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~  190 (258)
                       ......+.+.|      +|++.++|+++.|++.+...+....  ...+++||+++ ++.+|+.|+++.+.+.+|.+.++
T Consensus       208 ~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~-~~~~si~e~~~~i~~~~g~~~~~  286 (338)
T d1udca_         208 AVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGA-GVGNSVLDVVNAFSKACGKPVNY  286 (338)
T ss_dssp             HTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESC-SSCEEHHHHHHHHHHHHTSCCCE
T ss_pred             HhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecC-CCCCcHHHHHHHHHHHHCCCCce
Confidence             01122455555      3778899999999998887766532  33567899997 46899999999999999988877


Q ss_pred             EecC
Q 025054          191 IYVT  194 (258)
Q Consensus       191 ~~~~  194 (258)
                      ...+
T Consensus       287 ~~~~  290 (338)
T d1udca_         287 HFAP  290 (338)
T ss_dssp             EEEC
T ss_pred             EECC
Confidence            6665

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=4.1e-18  Score=141.06  Aligned_cols=188  Identities=18%  Similarity=0.202  Sum_probs=129.7

Q ss_pred             cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---
Q 025054            4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---   62 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---   62 (258)
                      ..+++++++|+.|.+.+..+++  ++|+|||+++...               +.++.+++++|++.+ ++|||+ |+   
T Consensus        50 ~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~v  128 (347)
T d1z45a2          50 KHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATV  128 (347)
T ss_dssp             TSCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGG
T ss_pred             ccCCeEEEeecCCHHHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceee
Confidence            4578999999999999999887  8899999998532               677899999999999 999998 54   


Q ss_pred             CCCC--------CCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCC---------
Q 025054           63 YGSN--------VDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGAT---------  119 (258)
Q Consensus        63 ~~~~--------~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~---------  119 (258)
                      +|..        ..+..+..|.++|..+|..+|+++++      .+++++++|++.+||.........+..         
T Consensus       129 yg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~  208 (347)
T d1z45a2         129 YGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPY  208 (347)
T ss_dssp             GCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHH
T ss_pred             ecCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHH
Confidence            3321        11123344667788899999998754      478999999999998543221111100         


Q ss_pred             -----CCCCCceEeccCCCc------eeeeeccchHHHHHHHHhcC------CCCCCceEEEcCCCCccCHHHHHHHHHH
Q 025054          120 -----APPRENILFYGDGQP------KAIFNKEEDIATYTIKAVDD------PRTLNKTLYLRPPKNIYSFKELVALWEK  182 (258)
Q Consensus       120 -----~~~~~~~~~~g~g~~------~~~~v~~~D~a~~~~~~l~~------~~~~~~~~~l~g~~~~~t~~e~~~~~~~  182 (258)
                           ......+.++|++.+      ..+++++.|.+.++..++..      ....++.||+++ ++.+|+.|+++.+.+
T Consensus       209 ~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~-~~~~s~~e~~~~i~~  287 (347)
T d1z45a2         209 MAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGS-GKGSTVFEVYHAFCK  287 (347)
T ss_dssp             HHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC-SCCEEHHHHHHHHHH
T ss_pred             HHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccccccccccccccccccccccceecC-CCcccHHHHHHHHHH
Confidence                 001223555665544      45566666677777776643      123567899987 569999999999999


Q ss_pred             HhCCcceeEec
Q 025054          183 KIGKTLEKIYV  193 (258)
Q Consensus       183 ~~g~~~~~~~~  193 (258)
                      .+|.+.++...
T Consensus       288 ~~~~~~~~~~~  298 (347)
T d1z45a2         288 ASGIDLPYKVT  298 (347)
T ss_dssp             HHTCCCCC---
T ss_pred             HHCCCCceEeC
Confidence            99988776543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.6e-19  Score=146.24  Aligned_cols=171  Identities=17%  Similarity=0.215  Sum_probs=127.1

Q ss_pred             HHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCCCCC---------C
Q 025054           18 ESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSNVD---------A   69 (258)
Q Consensus        18 ~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~~~---------~   69 (258)
                      +.+..++.++|+|||+|+...               +.++.+|+++|++.+ + ++|+ |+   ++....         +
T Consensus        57 ~~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~vy~~~~~~~~~e~~~~~  134 (312)
T d2b69a1          57 DVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGH  134 (312)
T ss_dssp             CTTSCCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCB
T ss_pred             HHHHHHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChheecCCCCCCCCccccCC
Confidence            344556778999999997521               567899999999999 7 5665 54   221110         1


Q ss_pred             CCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC------CCCCCCceEeccCCCceeeee
Q 025054           70 GHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA------TAPPRENILFYGDGQPKAIFN  139 (258)
Q Consensus        70 ~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~g~~~~~~v  139 (258)
                      ..+..|..+|..+|..+|.+++.    .+++++++|++.+||+....-. ...      ....++.+.++|+|++.++++
T Consensus       135 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i  213 (312)
T d2b69a1         135 VNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMND-GRVVSNFILQALQGEPLTVYGSGSQTRAFQ  213 (312)
T ss_dssp             CCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTC-CCHHHHHHHHHHHTCCEEEESSSCCEEECE
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCC-ccHHHHHHHHHHcCCCeEEeCCCCeeEccE
Confidence            12234556677799999999864    5899999999999996543211 000      012345678889999999999


Q ss_pred             ccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          140 KEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       140 ~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      |++|+++++..+++..  .++.|++++ +..+|+.|+++.+.+.+|.+.++...+
T Consensus       214 ~v~D~~~~~~~~~~~~--~~~~~n~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~  265 (312)
T d2b69a1         214 YVSDLVNGLVALMNSN--VSSPVNLGN-PEEHTILEFAQLIKNLVGSGSEIQFLS  265 (312)
T ss_dssp             EHHHHHHHHHHHHTSS--CCSCEEESC-CCEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             EHHHHHHHHHHHHhhc--cCCceEecC-CcccchhhHHHHHHHHhCCCCceEECC
Confidence            9999999999988765  677899987 679999999999999999887766544

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.76  E-value=6.7e-19  Score=146.64  Aligned_cols=183  Identities=16%  Similarity=0.210  Sum_probs=137.0

Q ss_pred             cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhC--------CccEE
Q 025054            4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVG--------NIKRF   58 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g--------~vk~~   58 (258)
                      ..+++++++|++|.+.+.++++  .+|+|||+|+...               +.++.+++++|++.+        ++++|
T Consensus        49 ~~~~~~~~~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~  128 (361)
T d1kewa_          49 SNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRF  128 (361)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEE
T ss_pred             cCCcEEEEccCCCHHHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEE
Confidence            3578999999999999999987  4799999997532               566889999998864        14589


Q ss_pred             Ec-CC---CCCCCC--------------CCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC--C-
Q 025054           59 FP-TE---YGSNVD--------------AGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT--M-  113 (258)
Q Consensus        59 v~-S~---~~~~~~--------------~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~--~-  113 (258)
                      |+ |+   +|....              +..+..|.++|..+|..+|.++..    .+++++++|++.+||+....  + 
T Consensus       129 i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i  208 (361)
T d1kewa_         129 HHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLI  208 (361)
T ss_dssp             EEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHH
T ss_pred             EEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHH
Confidence            97 54   332110              112234556688899999999865    68999999999999965321  0 


Q ss_pred             CCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          114 AQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       114 ~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      ..+......++.+.++|+|++.++|+|++|+|+++..+++.+. .++.||+++ +...|..|+++.+.+.++...
T Consensus       209 ~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~-~~~~~Ni~s-~~~~s~~~~~~~i~~~~~~~~  281 (361)
T d1kewa_         209 PLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK-AGETYNIGG-HNEKKNLDVVFTICDLLDEIV  281 (361)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TTCEEEECC-CCEEEHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC-CCCeEEECC-CCCcchHHHHhHhhhhccccc
Confidence            0000001224467888999999999999999999999998764 578999986 569999999999998776543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.76  E-value=5.7e-18  Score=139.79  Aligned_cols=181  Identities=15%  Similarity=0.153  Sum_probs=141.1

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGS   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~   65 (258)
                      .+++++.+|..|...+.....+.+.|+|+++...               +.++.+++++|++++ +++||+ |+   +|.
T Consensus        70 ~~~~~~~~d~~d~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~  148 (341)
T d1sb8a_          70 SNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGD  148 (341)
T ss_dssp             TTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTT
T ss_pred             CCeeEEeeccccccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCC
Confidence            3578899999999999999999999999987532               678999999999999 999998 54   332


Q ss_pred             C----CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC-C------CCCCCceEecc
Q 025054           66 N----VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA-T------APPRENILFYG  130 (258)
Q Consensus        66 ~----~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~g  130 (258)
                      .    .++..+..|.+.|..+|...|++++.    .+++++++||+.+||+....-..... .      ...++.+.++|
T Consensus       149 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g  228 (341)
T d1sb8a_         149 HPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYING  228 (341)
T ss_dssp             CCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEES
T ss_pred             CCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcC
Confidence            1    12233445677788899999998864    58999999999999975432111110 0      12244578889


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCC-CCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDP-RTLNKTLYLRPPKNIYSFKELVALWEKKIGKT  187 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~-~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~  187 (258)
                      +|.+.++|+|++|++.++..++..+ ...++.|++++ +...|++|+++.+.+.+|.+
T Consensus       229 ~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~-~~~~si~~i~~~i~~~~~~~  285 (341)
T d1sb8a_         229 DGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAV-GGRTSLNQLFFALRDGLAEN  285 (341)
T ss_dssp             SSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESC-SCCEEHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEEEEEeccchhhhhhhhccccccceeeeecc-cccchHHHHHHHHHHHhccc
Confidence            9999999999999999999988775 34678899986 56999999999999988754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.1e-18  Score=139.85  Aligned_cols=190  Identities=18%  Similarity=0.151  Sum_probs=136.9

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCC--cEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPV--DVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---   62 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~--d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---   62 (258)
                      ..+++++++|++|.+.+.+++.+.  ++++|+++...               +.++.+++++|++.+ |++|++ |+   
T Consensus        57 ~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~  135 (346)
T d1ek6a_          57 GRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATV  135 (346)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGG
T ss_pred             CCCcEEEEeeccccccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-ccccccccccee
Confidence            356889999999999999998755  57889987532               577899999999999 999997 43   


Q ss_pred             CCCCCCC-----CCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCC-CCC--CCC---------
Q 025054           63 YGSNVDA-----GHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMA-QPG--ATA---------  120 (258)
Q Consensus        63 ~~~~~~~-----~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~-~~~--~~~---------  120 (258)
                      ++.....     .....+.++|..+|...|+.+++     .+++++++|++.+||...+... ...  ...         
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  215 (346)
T d1ek6a_         136 YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQV  215 (346)
T ss_dssp             GCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHH
T ss_pred             eeccccccccccccccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHH
Confidence            2221111     11223456788899999988764     4899999999999996433211 000  000         


Q ss_pred             --CCCCceEecc------CCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCccee
Q 025054          121 --PPRENILFYG------DGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEK  190 (258)
Q Consensus       121 --~~~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~  190 (258)
                        .....+.+.|      +|.+.++|+|++|+|.++..++...  ...+++||+++ ++..|+.|+++.+.+.+|.+.++
T Consensus       216 ~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~-~~~~s~~dl~~~i~~~~~~~~~~  294 (346)
T d1ek6a_         216 AIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT-GTGYSVLQMVQAMEKASGKKIPY  294 (346)
T ss_dssp             HHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECC-SCCEEHHHHHHHHHHHHCSCCCE
T ss_pred             HHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCC-CCcccHHHHHHHHHHHhCCCCCe
Confidence              0122344433      4677889999999999988876543  33567899997 56999999999999999998877


Q ss_pred             EecCH
Q 025054          191 IYVTE  195 (258)
Q Consensus       191 ~~~~~  195 (258)
                      ...+.
T Consensus       295 ~~~~~  299 (346)
T d1ek6a_         295 KVVAR  299 (346)
T ss_dssp             EEECC
T ss_pred             EECCC
Confidence            66553

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=1.5e-17  Score=139.81  Aligned_cols=187  Identities=20%  Similarity=0.195  Sum_probs=133.1

Q ss_pred             CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc------------------hhchHHHHHHHHHhCCcc-EEEc-CC
Q 025054            5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE------------------VEDQFKLIAAIKEVGNIK-RFFP-TE   62 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~------------------~~~~~~li~aa~~~g~vk-~~v~-S~   62 (258)
                      .+++++++|++|.+.+.++|++  .|+|||+|+...                  +.++.+++++|++.+ ++ ++++ |+
T Consensus        67 ~~i~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~~i~~ss  145 (393)
T d1i24a_          67 KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGT  145 (393)
T ss_dssp             CCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECC
T ss_pred             CCcEEEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhc-cccceeeccc
Confidence            5789999999999999999985  599999997421                  567899999999998 65 4555 44


Q ss_pred             CCC---CCCC-----------------CCCCCCCccchhhHHHHHHHHH----hCCCCeEEEecCcccccCcCCCC----
Q 025054           63 YGS---NVDA-----------------GHPIEPAKSGYARKAKIRRAIE----AEGIPHTYVSCNCSFGFFLPTMA----  114 (258)
Q Consensus        63 ~~~---~~~~-----------------~~~~~~~~~~~~~k~~~e~~l~----~~~~~~t~lr~~~~~~~~~~~~~----  114 (258)
                      ...   ....                 ..+..|.++|..+|..+|.+++    +.+++++++|++.+||.......    
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~  225 (393)
T d1i24a_         146 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEE  225 (393)
T ss_dssp             GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGG
T ss_pred             cccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccc
Confidence            211   1000                 0122345667789999999885    46899999999999996532110    


Q ss_pred             ------CCCCC----------CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHH
Q 025054          115 ------QPGAT----------APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVA  178 (258)
Q Consensus       115 ------~~~~~----------~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~  178 (258)
                            .-+..          ...+..+.++|+|.+.++|+|++|++.++..+++++...+..+.+.+.++.+|++|+++
T Consensus       226 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~  305 (393)
T d1i24a_         226 LRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELAS  305 (393)
T ss_dssp             GCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHH
T ss_pred             cccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHH
Confidence                  00000          01234678889999999999999999999999988755555443322246899999999


Q ss_pred             HHHHHh---CCcceeEe
Q 025054          179 LWEKKI---GKTLEKIY  192 (258)
Q Consensus       179 ~~~~~~---g~~~~~~~  192 (258)
                      .+.++.   |..++...
T Consensus       306 ~i~~~~~~~~~~~~~~~  322 (393)
T d1i24a_         306 LVTKAGSKLGLDVKKMT  322 (393)
T ss_dssp             HHHHHHHTTTCCCCEEE
T ss_pred             HHHHHHHhhCCCcceee
Confidence            998875   44444433

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.72  E-value=1.7e-17  Score=137.25  Aligned_cols=182  Identities=18%  Similarity=0.223  Sum_probs=137.0

Q ss_pred             cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEcC---CCCC
Q 025054            4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFPT---EYGS   65 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~S---~~~~   65 (258)
                      ..+++++.+|+.|.+.+..++++.+.|+|+++...               +.++.+++++|+..+ .+.++.|   .+|.
T Consensus        51 ~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~  129 (346)
T d1oc2a_          51 GDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGD  129 (346)
T ss_dssp             SSSEEEEECCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCC
T ss_pred             cCCeEEEEccCCCHHHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecc
Confidence            45789999999999999999999999999987532               678899999999999 6544442   2332


Q ss_pred             C----------------CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-CC--CCCC
Q 025054           66 N----------------VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-GA--TAPP  122 (258)
Q Consensus        66 ~----------------~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-~~--~~~~  122 (258)
                      .                ..+..+..|.++|..+|..+|.+++.    .+++++++||+.+||+....-... ..  ....
T Consensus       130 ~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~  209 (346)
T d1oc2a_         130 LPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILA  209 (346)
T ss_dssp             BCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHH
T ss_pred             cCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHc
Confidence            1                01122334566777899999988864    589999999999999542110000 00  0122


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      +..+.++|+|++.++++|++|+++++..++..+. .++.+++++ ++..|+.|+++.+.+.+|.+.
T Consensus       210 ~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~  273 (346)
T d1oc2a_         210 GIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR-MGETYLIGA-DGEKNNKEVLELILEKMGQPK  273 (346)
T ss_dssp             TCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC-TTCEEEECC-SCEEEHHHHHHHHHHHTTCCT
T ss_pred             CCceeEeCCCCccccccchhhHHHHHHHHHhhcc-cCccccccc-cccccchHHHHHHHHHhCCCC
Confidence            3457788999999999999999999999888764 677888887 459999999999999998753

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.72  E-value=9.5e-17  Score=134.45  Aligned_cols=189  Identities=18%  Similarity=0.207  Sum_probs=137.5

Q ss_pred             cCceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC--
Q 025054            4 MINCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE--   62 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~--   62 (258)
                      ..++.++.+|+.|.+.+.++++   ++|+|||+++...               +.++.+++++|++.+ +++++. |+  
T Consensus        68 ~~~~~~~~~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~  146 (383)
T d1gy8a_          68 DRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAA  146 (383)
T ss_dssp             TCCCEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGG
T ss_pred             ccceEEEECcccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Ccccccccccc
Confidence            3468899999999999998885   7899999998532               677899999999999 999886 22  


Q ss_pred             -CCCCC-----------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-----------
Q 025054           63 -YGSNV-----------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-----------  115 (258)
Q Consensus        63 -~~~~~-----------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-----------  115 (258)
                       ++...           .+.....|..+|..+|...|++++.    .+++++++|++.+||+.......           
T Consensus       147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip  226 (383)
T d1gy8a_         147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIP  226 (383)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHH
T ss_pred             cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHH
Confidence             21110           1112334567788899999999865    58999999999999964321100           


Q ss_pred             -----------CCC------CCCCCCceEecc------CCCceeeeeccchHHHHHHHHhcCC--------CCCCceEEE
Q 025054          116 -----------PGA------TAPPRENILFYG------DGQPKAIFNKEEDIATYTIKAVDDP--------RTLNKTLYL  164 (258)
Q Consensus       116 -----------~~~------~~~~~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~--------~~~~~~~~l  164 (258)
                                 .+.      .......+.+.|      +|.+.++|+|++|+++++..+++..        ...+++||+
T Consensus       227 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni  306 (383)
T d1gy8a_         227 IILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNL  306 (383)
T ss_dssp             HHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEE
T ss_pred             HHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEe
Confidence                       000      001122344444      5788899999999999999987642        124568999


Q ss_pred             cCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          165 RPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       165 ~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      ++ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus       307 ~s-~~~~s~~el~~~i~~~~~~~~~~~~~~  335 (383)
T d1gy8a_         307 GT-SRGYSVREVIEVARKTTGHPIPVRECG  335 (383)
T ss_dssp             SC-SCCEEHHHHHHHHHHHHCCCCCEEEEC
T ss_pred             CC-CCceeHHHHHHHHHHHhCCCCceEECC
Confidence            86 569999999999999999887776554

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.71  E-value=3.7e-17  Score=134.24  Aligned_cols=189  Identities=13%  Similarity=0.147  Sum_probs=137.2

Q ss_pred             CceeEEeccCCCHHHHHHhhCCC--cEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC-
Q 025054            5 INCLIAQGDLHDHESLVKAIKPV--DVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS-   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~--d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~-   65 (258)
                      .+++++.+|+.|.+++.++++++  |+|||+++...               +.++++|+++|.+.+ ++++|. |+.+. 
T Consensus        49 ~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~  127 (338)
T d1orra_          49 GNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKV  127 (338)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGG
T ss_pred             CCcEEEEcccCCHHHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccccccc
Confidence            46899999999999999999865  99999998632               678899999999999 776664 43221 


Q ss_pred             --CCC---------------------CCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC
Q 025054           66 --NVD---------------------AGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA  118 (258)
Q Consensus        66 --~~~---------------------~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~  118 (258)
                        ...                     ......+...|...|...|.++..    .+...+.+|+..+++...........
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (338)
T d1orra_         128 YGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGW  207 (338)
T ss_dssp             GTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCH
T ss_pred             cccccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccc
Confidence              000                     011122444556688888877643    68889999988777543322111000


Q ss_pred             -----------CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC-CCCCceEEEc-CCCCccCHHHHHHHHHHHhC
Q 025054          119 -----------TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-RTLNKTLYLR-PPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       119 -----------~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~~~~~~~l~-g~~~~~t~~e~~~~~~~~~g  185 (258)
                                 .......+.++|+|++.++|+|++|+++++..+++.+ ...++.+++. |.+..+|+.|+++.+.+.+|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~  287 (338)
T d1orra_         208 VGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCN  287 (338)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHT
T ss_pred             cchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHC
Confidence                       0122446888999999999999999999999999875 3467888884 33457899999999999999


Q ss_pred             CcceeEecC
Q 025054          186 KTLEKIYVT  194 (258)
Q Consensus       186 ~~~~~~~~~  194 (258)
                      .+.++...+
T Consensus       288 ~~~~~~~~~  296 (338)
T d1orra_         288 IDMRFTNLP  296 (338)
T ss_dssp             CCCCEEEEC
T ss_pred             CCceeEeCC
Confidence            888776654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.69  E-value=1.3e-16  Score=130.33  Aligned_cols=182  Identities=12%  Similarity=0.054  Sum_probs=135.7

Q ss_pred             cCceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---
Q 025054            4 MINCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---   62 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---   62 (258)
                      ..+++++.+|+.|.+.+.+.+..  .++++|+++...               +.++.+++++|++.+..++|++ |+   
T Consensus        48 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~  127 (321)
T d1rpna_          48 EGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEM  127 (321)
T ss_dssp             GGGEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred             cCCcEEEEccccChHHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhh
Confidence            35789999999999999998874  567888876432               5678999999999994446776 43   


Q ss_pred             CCCCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-------CCCCCCCCCceE
Q 025054           63 YGSNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-------PGATAPPRENIL  127 (258)
Q Consensus        63 ~~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-------~~~~~~~~~~~~  127 (258)
                      ++...    ++..+..|.++|..+|...|++++.    .+++++++|++.+||+....-..       ............
T Consensus       128 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i  207 (321)
T d1rpna_         128 FGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQEL  207 (321)
T ss_dssp             GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCE
T ss_pred             cCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcE
Confidence            22211    1223345677888899999998864    68999999999999975321100       000012233455


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      .+|+|++.++|+|++|+++++..++.++  .++.|++++ ++..|+.++++.+.+..|.+.
T Consensus       208 ~~g~g~~~r~~i~v~D~~~~~~~~~~~~--~~~~~ni~~-~~~~s~~~~~~~~~~~~~~~~  265 (321)
T d1rpna_         208 RLGNVDAKRDWGFAGDYVEAMWLMLQQD--KADDYVVAT-GVTTTVRDMCQIAFEHVGLDY  265 (321)
T ss_dssp             EESCTTCEEECEEHHHHHHHHHHHHHSS--SCCCEEECC-SCEEEHHHHHHHHHHTTTCCG
T ss_pred             EECCCCeEEccEEeHHHHHHHHHHHhcC--CcCCceecc-cccceehhhhHHHHHHhCCCc
Confidence            6789999999999999999999999887  467799987 469999999999999999765

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=5.2e-17  Score=134.09  Aligned_cols=187  Identities=17%  Similarity=0.105  Sum_probs=138.1

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCc---cEEEc-CC-
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNI---KRFFP-TE-   62 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~v---k~~v~-S~-   62 (258)
                      .+++++.+|++|.+.+..+++  +.+.|+|+++...               +.++.+++++|++++ +   ++||+ |+ 
T Consensus        56 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~~~~i~~SS~  134 (347)
T d1t2aa_          56 GNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTS  134 (347)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEG
T ss_pred             CCcEEEEeecCCchhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcC-CCCCcEEEEecch
Confidence            467899999999999999987  4678888876432               557889999999987 5   48887 54 


Q ss_pred             --CCCC----CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-------CCCCCCCCCc
Q 025054           63 --YGSN----VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-------PGATAPPREN  125 (258)
Q Consensus        63 --~~~~----~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-------~~~~~~~~~~  125 (258)
                        ||..    ..+..+..|.++|..+|..+|+++..    .+++++++|++.+||+.......       ..........
T Consensus       135 ~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~  214 (347)
T d1t2aa_         135 ELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLE  214 (347)
T ss_dssp             GGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCS
T ss_pred             heecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcc
Confidence              4421    12233445677888899999998864    58999999999999964321100       0000012345


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE  195 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~  195 (258)
                      ..++|+|++.++++|++|++.++..++...  ..+.++++. ....|+++........+|+.+.....+.
T Consensus       215 ~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (347)
T d1t2aa_         215 CFSLGNLDAKRDWGHAKDYVEAMWLMLQND--EPEDFVIAT-GEVHSVREFVEKSFLHIGKTIVWEGKNE  281 (347)
T ss_dssp             CEEESCTTCEECCEEHHHHHHHHHHHHHSS--SCCCEEECC-SCCEEHHHHHHHHHHHTTCCEEEESCGG
T ss_pred             eeecCCCcceeeeeEecHHHHHHHHHhhcC--CCccceecc-ccccccchhhhhhhhhhcceeeecccch
Confidence            677899999999999999999999999876  345566664 5689999999999999998776655443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.68  E-value=7.1e-17  Score=126.24  Aligned_cols=173  Identities=17%  Similarity=0.084  Sum_probs=123.5

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------------------------hhchHHHHHHHHHhCCcc
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------------------------~~~~~~li~aa~~~g~vk   56 (258)
                      .+++++.+|++|.+++.++++++|.|||+++...                            +.+.++++..+...+ ++
T Consensus        47 ~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  125 (252)
T d2q46a1          47 GEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VK  125 (252)
T ss_dssp             CCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CS
T ss_pred             CCcEEEEeeeccccccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-cc
Confidence            4689999999999999999999999999987421                            356789999999988 88


Q ss_pred             EEEc-CCCCCCCCCCC-CCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCc
Q 025054           57 RFFP-TEYGSNVDAGH-PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQP  134 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~-~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  134 (258)
                      ++.+ |..+....... .......+...+...+.+..++++++|++||+++||+.........     .....   ....
T Consensus       126 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~-----~~~~~---~~~~  197 (252)
T d2q46a1         126 HIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLV-----GKDDE---LLQT  197 (252)
T ss_dssp             EEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEEE-----ESTTG---GGGS
T ss_pred             ccccccccccCCCCcccccccccchhhhhhhhhhhhhcccccceeecceEEECCCcchhhhhh-----ccCcc---cccC
Confidence            8887 65544332211 1111223344667777777889999999999999997643221100     00000   1233


Q ss_pred             eeeeeccchHHHHHHHHhcCCCCCCceEEEcCCC--CccCHHHHHHHHHHHhCC
Q 025054          135 KAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPK--NIYSFKELVALWEKKIGK  186 (258)
Q Consensus       135 ~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~--~~~t~~e~~~~~~~~~g~  186 (258)
                      ..++|+++|+|++++.++.+++..|++|+++++.  ...+++|+.+++.++.++
T Consensus       198 ~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~r  251 (252)
T d2q46a1         198 DTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  251 (252)
T ss_dssp             SCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCCC
T ss_pred             CCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHhc
Confidence            4578999999999999999988889999998632  245678888888776653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.1e-16  Score=125.04  Aligned_cols=150  Identities=15%  Similarity=0.061  Sum_probs=110.0

Q ss_pred             CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCC
Q 025054            5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGH   71 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~   71 (258)
                      ..++...+|+++.+++.++++|+|+|||+++...            +....+++++|++.+ +++||+ |+.++...   
T Consensus        59 ~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~---  134 (232)
T d2bkaa1          59 KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS---  134 (232)
T ss_dssp             GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT---
T ss_pred             ceeeeeeecccccccccccccccccccccccccccccchhhhhhhcccccceeeecccccC-ccccccCCccccccC---
Confidence            4578888999999999999999999999997532            567789999999999 999999 88776543   


Q ss_pred             CCCCCccchhhHHHHHHHHHhCCCC-eEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHH
Q 025054           72 PIEPAKSGYARKAKIRRAIEAEGIP-HTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIK  150 (258)
Q Consensus        72 ~~~~~~~~~~~k~~~e~~l~~~~~~-~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~  150 (258)
                         +..+|..+|..+|+++++.+++ +||+|||.+||+.....  +... +....+...+.+......|+++|+|++++.
T Consensus       135 ---~~~~Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~  208 (232)
T d2bkaa1         135 ---SNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESR--PGEW-LVRKFFGSLPDSWASGHSVPVVTVVRAMLN  208 (232)
T ss_dssp             ---CSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGS--HHHH-HHHHHHCSCCTTGGGGTEEEHHHHHHHHHH
T ss_pred             ---ccchhHHHHHHhhhccccccccceEEecCceeecCCCcCc--HHHH-HHHHHhhccCCcccCCCeEEHHHHHHHHHH
Confidence               2456888999999999999886 99999999999753321  0000 000011112222334456899999999999


Q ss_pred             HhcCCCCCCceEEEc
Q 025054          151 AVDDPRTLNKTLYLR  165 (258)
Q Consensus       151 ~l~~~~~~~~~~~l~  165 (258)
                      ++..+. .++.+.+.
T Consensus       209 ~~~~~~-~~~~~i~~  222 (232)
T d2bkaa1         209 NVVRPR-DKQMELLE  222 (232)
T ss_dssp             HHTSCC-CSSEEEEE
T ss_pred             HHhcCc-cCCeEEEc
Confidence            887764 44555554

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.65  E-value=1.9e-16  Score=126.72  Aligned_cols=227  Identities=14%  Similarity=0.059  Sum_probs=152.7

Q ss_pred             cccCceeEEec-----cCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEE
Q 025054            2 LYMINCLIAQG-----DLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus         2 l~~~gv~~~~~-----D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v   59 (258)
                      |.+.|.+++..     |+.|.+++.++++  +.|+|||+++...               ......+..+++..+ ...+.
T Consensus        21 L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~   99 (281)
T d1vl0a_          21 LKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQ   99 (281)
T ss_dssp             HTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEE
T ss_pred             HHhCCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeeccccccccccccchhhccccccccccccccccccc-ccccc
Confidence            55678888765     4678899999997  5699999997643               344556667777766 44444


Q ss_pred             cCCC---CCC----CCCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054           60 PTEY---GSN----VDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG  132 (258)
Q Consensus        60 ~S~~---~~~----~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  132 (258)
                      .|+.   +..    ..+.....+...|...|...|+++++.+.+++++|++++||...+....+......+....+.+  
T Consensus       100 ~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~--  177 (281)
T d1vl0a_         100 ISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH--  177 (281)
T ss_dssp             EEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES--
T ss_pred             cccceeeeccccccccccccccchhhhhhhhhHHHHHHHHhCCCccccceeEEeCCCcccccchhhhhccCCceeecC--
Confidence            4332   111    1112223345566679999999999999999999999999975432111000011223444444  


Q ss_pred             CceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhh
Q 025054          133 QPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIM  212 (258)
Q Consensus       133 ~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (258)
                      ++.+++++++|+++++..+++++  ..+.+++++ ++.+|+.|+++.+.+.+|.+.++..++.+++       +.+..  
T Consensus       178 ~~~~~~i~v~D~~~~~~~~~~~~--~~g~~~~~~-~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~-------~~~a~--  245 (281)
T d1vl0a_         178 DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTC-KGICSWYDFAVEIFRLTGIDVKVTPCTTEEF-------PRPAK--  245 (281)
T ss_dssp             SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCC-BSCEEHHHHHHHHHHHHCCCCEEEEECSTTS-------CCSSC--
T ss_pred             Cceeccchhhhhhhhhhhhhhhc--ccCceeEeC-CCccchHHHHHHHHHHhCCCceEEeccHHHc-------CCcCC--
Confidence            57899999999999999999876  456899987 4699999999999999999999988875432       11100  


Q ss_pred             heeeeeEEEecCCccccCCCCCcccccccCCCCcccCHHHHHhhhC
Q 025054          213 LVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVEEYLDQFV  258 (258)
Q Consensus       213 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~s~ee~l~~~~  258 (258)
                               +....  -++.   ....+.+ |+++++++|-|++++
T Consensus       246 ---------rp~~~--~ld~---~k~~~~~-g~~~~~~~~~l~~~l  276 (281)
T d1vl0a_         246 ---------RPKYS--VLRN---YMLELTT-GDITREWKESLKEYI  276 (281)
T ss_dssp             ---------CCSBC--CBCC---HHHHHTT-CCCCCBHHHHHHHHH
T ss_pred             ---------Ccccc--ccCH---HHHHHHh-CCCCCCHHHHHHHHH
Confidence                     00000  0111   2344555 888889999888753

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.63  E-value=2.6e-16  Score=129.79  Aligned_cols=177  Identities=14%  Similarity=0.111  Sum_probs=121.8

Q ss_pred             eeEEeccCCCHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC---C--
Q 025054            7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV---D--   68 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~---~--   68 (258)
                      ...+.+|+.|.+++.+++.++|.|+|+++...            +.++.+++++|++.+.+++||+ |+.++..   .  
T Consensus        64 ~~~~~~Dl~~~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~  143 (342)
T d1y1pa1          64 ETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNV  143 (342)
T ss_dssp             EEEECSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTC
T ss_pred             cEEEeccccchhhhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCC
Confidence            34577899999999999999999999998632            5778999999998744999998 6643210   0  


Q ss_pred             ----------------------CCCCCCCCccchhhHHHHHHHHH----h--CCCCeEEEecCcccccCcCCCCCCCCC-
Q 025054           69 ----------------------AGHPIEPAKSGYARKAKIRRAIE----A--EGIPHTYVSCNCSFGFFLPTMAQPGAT-  119 (258)
Q Consensus        69 ----------------------~~~~~~~~~~~~~~k~~~e~~l~----~--~~~~~t~lr~~~~~~~~~~~~~~~~~~-  119 (258)
                                            +..+..|..+|..+|..+|.++.    +  .++.++++||+.++|+........... 
T Consensus       144 ~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~  223 (342)
T d1y1pa1         144 EGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTS  223 (342)
T ss_dssp             CCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHH
T ss_pred             CCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchH
Confidence                                  00111123457779999997653    3  357788999999999754321111100 


Q ss_pred             ----CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          120 ----APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       120 ----~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                          .+..+.......+++.++|+|++|+|+++..++++++..++.+ +++ ++.+|++|+++++.+.++
T Consensus       224 ~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~-~~~-~~~~t~~eia~~i~k~~p  291 (342)
T d1y1pa1         224 GWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRV-YGT-AGTFDWNTVLATFRKLYP  291 (342)
T ss_dssp             HHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEE-EEC-CEEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCccccceEE-EEc-CCceEHHHHHHHHHHHcC
Confidence                0011122222234566889999999999999998876455554 554 469999999999999874

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=1.1e-14  Score=118.45  Aligned_cols=182  Identities=14%  Similarity=0.128  Sum_probs=131.5

Q ss_pred             eccCCCHHHHHHhhC--CCcEEEEccCccc----------------hhchHHHHHHHHHhCCccEEEc-CCCCC---CCC
Q 025054           11 QGDLHDHESLVKAIK--PVDVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS---NVD   68 (258)
Q Consensus        11 ~~D~~d~~~l~~al~--g~d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~v~-S~~~~---~~~   68 (258)
                      +.|+.|.+.+.+.++  +.|.|+|+++...                +.++.+++++|++++ ++|||+ |+..+   ...
T Consensus        37 ~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~  115 (315)
T d1e6ua_          37 ELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAK  115 (315)
T ss_dssp             TCCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCC
T ss_pred             hccccCHHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCC
Confidence            346678888888876  5799999985421                678899999999999 999998 66432   111


Q ss_pred             C---------CCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC------------CCCCC
Q 025054           69 A---------GHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA------------TAPPR  123 (258)
Q Consensus        69 ~---------~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~------------~~~~~  123 (258)
                      .         ....++..+|..+|..+|+.++.    .+++++++||+.+||+..........            .....
T Consensus       116 ~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (315)
T d1e6ua_         116 QPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKA  195 (315)
T ss_dssp             SSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTC
T ss_pred             CCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccC
Confidence            0         01111233577799999998864    58999999999999965322111000            00223


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--------CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--------TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT  194 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--------~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  194 (258)
                      ..+.+.|+|...+++++++|++.++..++....        .....++++. +...++.++++.+.+.+|.+..+...+
T Consensus       196 ~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~i~~~~~~~~~i~~~~  273 (315)
T d1e6ua_         196 PDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGT-GVDCTIRELAQTIAKVVGYKGRVVFDA  273 (315)
T ss_dssp             SEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESC-SCCEEHHHHHHHHHHHHTCCSEEEEET
T ss_pred             CceEEcCCCceEEEEEEeehhHHHHHHhhhhccccccccccccccccccCC-CcchHHHHHHHHHHHHhCCCcceEECC
Confidence            457788999999999999999999999886541        1345677775 468999999999999999988776543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.59  E-value=6.5e-15  Score=120.86  Aligned_cols=181  Identities=13%  Similarity=0.077  Sum_probs=128.7

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhC----CccEEEc-CC
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVG----NIKRFFP-TE   62 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g----~vk~~v~-S~   62 (258)
                      ..+++..+|+.+.+.+.++++  ++|+|||+++...               ..+..++++++++.+    ...+++. |+
T Consensus        56 ~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss  135 (339)
T d1n7ha_          56 ALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS  135 (339)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred             cceEEEEccccCHHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeeccc
Confidence            347788999999999999886  6799999998632               456788888887653    1235555 32


Q ss_pred             C---CC---CCCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC-------CCCCCCc
Q 025054           63 Y---GS---NVDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA-------TAPPREN  125 (258)
Q Consensus        63 ~---~~---~~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~-------~~~~~~~  125 (258)
                      .   +.   ..++..+..|.++|..+|...|.++..    .+++++++||+.+||+..+.-.....       .......
T Consensus       136 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~  215 (339)
T d1n7ha_         136 SEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQT  215 (339)
T ss_dssp             GGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCC
T ss_pred             ceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCC
Confidence            1   11   112233455777888899999988754    68999999999999975332100000       0012234


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      ..+.|++.+.+++++++|+++++..++..+.  +..+++.. +...|..++++.+.+.+|...
T Consensus       216 ~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~--~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~  275 (339)
T d1n7ha_         216 KLFLGNLQASRDWGFAGDYVEAMWLMLQQEK--PDDYVVAT-EEGHTVEEFLDVSFGYLGLNW  275 (339)
T ss_dssp             CEEESCTTCEEECEEHHHHHHHHHHHHTSSS--CCEEEECC-SCEEEHHHHHHHHHHHTTCCG
T ss_pred             eEEeCCCCccccceeeehHHHHHHHHHhcCC--CCcccccc-ccccccchhhhhhhhhhhccc
Confidence            5567889999999999999999999999874  33344443 468999999999999999754

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.49  E-value=1.9e-13  Score=104.73  Aligned_cols=132  Identities=13%  Similarity=0.102  Sum_probs=92.9

Q ss_pred             eccCCCHHHHHHhhC-CCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCC
Q 025054           11 QGDLHDHESLVKAIK-PVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEP   75 (258)
Q Consensus        11 ~~D~~d~~~l~~al~-g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~   75 (258)
                      ..+..|..++...+. ++|+||++++...             +....+++++|++++ +++|++ |+.++...      +
T Consensus        46 ~~~~~d~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~------~  118 (212)
T d2a35a1          46 DNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK------S  118 (212)
T ss_dssp             ECCBSCHHHHGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------C
T ss_pred             cccccchhhhhhccccchheeeeeeeeeccccccccccccchhhhhhhccccccccc-ccccccccccccccc------c
Confidence            344555555555544 6899999987542             567789999999999 999999 88877543      2


Q ss_pred             CccchhhHHHHHHHHHhCCCC-eEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcC
Q 025054           76 AKSGYARKAKIRRAIEAEGIP-HTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDD  154 (258)
Q Consensus        76 ~~~~~~~k~~~e~~l~~~~~~-~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~  154 (258)
                      ...|..+|..+|+++++.+.+ ||++||+.+||+.........   .......+.   ..++.+|+++|+|++++.++.+
T Consensus       119 ~~~y~~~K~~~E~~l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~---~~~~~~~~~---~~~~~~i~v~DvA~ai~~~~~~  192 (212)
T d2a35a1         119 SIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEI---LAAPIARIL---PGKYHGIEACDLARALWRLALE  192 (212)
T ss_dssp             SSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGG---TTCCCC-------CHHHHHHHHHHHHHHHHHHTC
T ss_pred             ccchhHHHHHHhhhccccccccceeeCCcceeCCcccccHHHH---HHHHHhhcc---CCCCcEEEHHHHHHHHHHHHcC
Confidence            456777999999999998875 999999999997543211000   000011111   1345679999999999999987


Q ss_pred             C
Q 025054          155 P  155 (258)
Q Consensus       155 ~  155 (258)
                      +
T Consensus       193 ~  193 (212)
T d2a35a1         193 E  193 (212)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.30  E-value=3.6e-12  Score=104.89  Aligned_cols=189  Identities=13%  Similarity=0.067  Sum_probs=128.9

Q ss_pred             CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEcCCCCC--
Q 025054            5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFPTEYGS--   65 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~S~~~~--   65 (258)
                      .+++++.+|++|++.+.++++  ..|+|+|+++...               +.++.+++++|++.+..+.++.|+.+.  
T Consensus        56 ~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~  135 (356)
T d1rkxa_          56 DGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCY  135 (356)
T ss_dssp             TTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGB
T ss_pred             cCCeEEEeeccChHhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccc
Confidence            479999999999999999988  4689999998632               567899999999987355566532211  


Q ss_pred             -CC------CCCCCCCCCccchhhHHHHHHHHHh-------------CCCCeEEEecCcccccCcCCCCCCC--C-CCCC
Q 025054           66 -NV------DAGHPIEPAKSGYARKAKIRRAIEA-------------EGIPHTYVSCNCSFGFFLPTMAQPG--A-TAPP  122 (258)
Q Consensus        66 -~~------~~~~~~~~~~~~~~~k~~~e~~l~~-------------~~~~~t~lr~~~~~~~~~~~~~~~~--~-~~~~  122 (258)
                       ..      ++..+..|..+|..+|...|..++.             .++.++++||+.+||+.......+.  + ....
T Consensus       136 ~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~  215 (356)
T d1rkxa_         136 DNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFE  215 (356)
T ss_dssp             CCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHH
T ss_pred             cccccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHh
Confidence             00      1112233556677788888866642             4688999999999986532111100  0 0112


Q ss_pred             CCceEeccCCCceeeeeccchHHHHHHHHhcCCCC----CCceEEEc-CCCCccCHHHHHHHHHHHhCCcceeEec
Q 025054          123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRT----LNKTLYLR-PPKNIYSFKELVALWEKKIGKTLEKIYV  193 (258)
Q Consensus       123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~----~~~~~~l~-g~~~~~t~~e~~~~~~~~~g~~~~~~~~  193 (258)
                      .+...+++.+++.+++++++|++.++..++..+..    .+...+.. +.+..+|..++++.+.+.+|....+...
T Consensus       216 ~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  291 (356)
T d1rkxa_         216 QSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLD  291 (356)
T ss_dssp             TTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-
T ss_pred             CCCceEEeeccccccccccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEc
Confidence            33455678889999999999999999988876421    22222222 2345789999999999999987766543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=7.1e-12  Score=100.59  Aligned_cols=157  Identities=11%  Similarity=0.000  Sum_probs=100.9

Q ss_pred             CCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEcCC-CCC--CCC----CCCCCCCCccchhhHH
Q 025054           25 KPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFPTE-YGS--NVD----AGHPIEPAKSGYARKA   84 (258)
Q Consensus        25 ~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~S~-~~~--~~~----~~~~~~~~~~~~~~k~   84 (258)
                      ..++.|+|+++...             +....+++++++..+ ++.++.|+ ...  ...    ......+..+|..+|.
T Consensus        67 ~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~  145 (307)
T d1eq2a_          67 GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKF  145 (307)
T ss_dssp             SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-CCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHH
T ss_pred             cchhhhhhhccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            46789999986432             567789999999999 98777633 211  111    1112235567778999


Q ss_pred             HHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC--------CCCCCCceEeccCCCceeeeeccchHHHHHHHHh
Q 025054           85 KIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA--------TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAV  152 (258)
Q Consensus        85 ~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l  152 (258)
                      ..|.++++    .+++++++|++.+||+....-.....        .........+.|+++..+++++++|++.++..++
T Consensus       146 ~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~  225 (307)
T d1eq2a_         146 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL  225 (307)
T ss_dssp             HHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred             hhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHh
Confidence            99998875    68999999999999965421100000        0011122334577888999999999999999998


Q ss_pred             cCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          153 DDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       153 ~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                      ..+  .++.|++++ ++..|++|+++.+.+..+
T Consensus       226 ~~~--~~~~~~~~~-~~~~si~~i~~~i~~~~~  255 (307)
T d1eq2a_         226 ENG--VSGIFNLGT-GRAESFQAVADATLAYHK  255 (307)
T ss_dssp             HHC--CCEEEEESC-SCCBCHHHHHHHC-----
T ss_pred             hhc--ccccccccc-ccchhHHHHHHHHHHhcC
Confidence            876  567899986 569999999999987655

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.17  E-value=6.6e-12  Score=100.45  Aligned_cols=171  Identities=13%  Similarity=0.085  Sum_probs=115.4

Q ss_pred             eccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEcCC---CCCCC---
Q 025054           11 QGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFPTE---YGSNV---   67 (258)
Q Consensus        11 ~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~S~---~~~~~---   67 (258)
                      .+|++|.+.+.+++++  .|+|||+++...               +....+++++|++.+ ++.++.|+   ++...   
T Consensus        37 ~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~  115 (298)
T d1n2sa_          37 CGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIP  115 (298)
T ss_dssp             CCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCC
T ss_pred             cCcCCCHHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCC
Confidence            4799999999999984  599999997532               567789999999988 77666533   22111   


Q ss_pred             -CCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCC-CCCCCCCCCCCCceEeccCCCceeeeeccchHH
Q 025054           68 -DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPT-MAQPGATAPPRENILFYGDGQPKAIFNKEEDIA  145 (258)
Q Consensus        68 -~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a  145 (258)
                       .+.....|...|..+|..+|+++++....+.++|++.++...... .............+.+.  ++...+++++.|++
T Consensus       116 ~~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~  193 (298)
T d1n2sa_         116 WQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLA  193 (298)
T ss_dssp             BCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHH
T ss_pred             CccccccCCCchHhhhhhhhhhhHHhhhcccccccccceeeccCCccchhhhhhhcccceeecc--cceeecccccchHH
Confidence             122233456677889999999999877777777776666432211 10000000112233333  45677899999999


Q ss_pred             HHHHHHhcC---CCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054          146 TYTIKAVDD---PRTLNKTLYLRPPKNIYSFKELVALWEKKIG  185 (258)
Q Consensus       146 ~~~~~~l~~---~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g  185 (258)
                      +++..++..   ....+++|+++++ +.+|..|+++.+.+..+
T Consensus       194 ~~~~~~i~~~~~~~~~~~~~n~~~~-~~~~~~~~~~~i~~~~~  235 (298)
T d1n2sa_         194 DCTAHAIRVALNKPEVAGLYHLVAG-GTTTWHDYAALVFDEAR  235 (298)
T ss_dssp             HHHHHHHHHHHHCGGGCEEEECCCB-SCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhccccccccccccCC-CceecHHHHHHHHhhhh
Confidence            999887753   2346788999985 59999999998877654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.31  E-value=8.8e-06  Score=62.47  Aligned_cols=143  Identities=9%  Similarity=0.042  Sum_probs=94.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                       +...+.++...++.+ -
T Consensus        53 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~  131 (244)
T d1nffa_          53 AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-R  131 (244)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-c
Confidence            46788999999998877664       6899999998632                       223344555556665 4


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+.......      ...  
T Consensus       132 G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~------~~~--  199 (244)
T d1nffa_         132 GSIINISSIEGLAGT----VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED------IFQ--  199 (244)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT------CSC--
T ss_pred             ceEEecccccccccc----ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH------HHh--
Confidence            67887 665443221    1234566799999877653       689999999998877654332110      001  


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .+-     .-+...+|+|++++.++.+..  -.|+.+.+-|
T Consensus       200 ~pl-----~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDG  235 (244)
T d1nffa_         200 TAL-----GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDG  235 (244)
T ss_dssp             CSS-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccc-----cCCCCHHHHHHHHHHHhChhhCCCcCCEEEECC
Confidence            110     025789999999999987642  2477888875

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.28  E-value=4.8e-06  Score=64.16  Aligned_cols=149  Identities=13%  Similarity=0.031  Sum_probs=90.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                       +...+.++...++.+ -
T Consensus        53 ~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~  131 (247)
T d2ew8a1          53 RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-W  131 (247)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-C
Confidence            46788999999998887654       6899999998532                       233455666666666 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+........    ....  
T Consensus       132 G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~--  201 (247)
T d2ew8a1         132 GRIINLTSTTYWLKI----EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA----MFDV--  201 (247)
T ss_dssp             EEEEEECCGGGGSCC----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------
T ss_pred             CCccccccchhcccC----cccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccch----hHHH--
Confidence            67887 665433221    2245666799998876653       5899999999988765443211100    0000  


Q ss_pred             eccCCCcee-eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKA-IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~-~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .... ..++ -+...+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       202 ~~~~-~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDG  242 (247)
T d2ew8a1         202 LPNM-LQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDG  242 (247)
T ss_dssp             --CT-TSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred             HHHH-hccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            0000 0011 25678999999999987643  2477888865

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.23  E-value=8.1e-06  Score=62.55  Aligned_cols=128  Identities=16%  Similarity=0.124  Sum_probs=87.0

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +..+.+|++|++++.++++       +.|++||.++...                       +...+.++...++.+ -.
T Consensus        59 ~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G  137 (240)
T d2bd0a1          59 TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SG  137 (240)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CC
Confidence            5678999999998877665       6899999998532                       334466666666766 46


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++-..+......             
T Consensus       138 ~Ii~isS~~~~~~~----~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~-------------  200 (240)
T d2bd0a1         138 HIFFITSVAATKAF----RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-------------  200 (240)
T ss_dssp             EEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-------------
T ss_pred             ceEEEechhhcCCC----CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH-------------
Confidence            7776 665443221    2245677799988766543       68999999999887654332110             


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                          ..+..+...+|+|++++.++.++.
T Consensus       201 ----~~~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         201 ----EMQALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             ----TTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             ----hhHhcCCCHHHHHHHHHHHHcCCc
Confidence                111124567999999999998763

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.11  E-value=1.1e-05  Score=62.50  Aligned_cols=156  Identities=13%  Similarity=0.147  Sum_probs=92.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                       +...+.++...++.+ -
T Consensus        56 ~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~  134 (260)
T d1x1ta1          56 KVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-F  134 (260)
T ss_dssp             CEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-C
Confidence            46778999999998888765       6899999998532                       233455666666666 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCC----CCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGAT----APPR  123 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~----~~~~  123 (258)
                      -++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++-..+..........    ....
T Consensus       135 G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  210 (260)
T d1x1ta1         135 GRIINIASAHGLVAS----ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQET  210 (260)
T ss_dssp             EEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------
T ss_pred             ceEeecccccceecc----CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHH
Confidence            67886 655443221    2245677799999877653       589999999998876554322110000    0000


Q ss_pred             CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..........-..-+...+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       211 ~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDG  255 (260)
T d1x1ta1         211 AARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             ----CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECc
Confidence            000000000000125689999999999987642  2477888875

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.10  E-value=5.4e-06  Score=63.45  Aligned_cols=148  Identities=9%  Similarity=0.036  Sum_probs=94.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      ++..+++|++|++++.++++       +.|++||.++...                       +...+.++...++.+ -
T Consensus        46 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~  124 (237)
T d1uzma1          46 GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-F  124 (237)
T ss_dssp             TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C
T ss_pred             CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-C
Confidence            45667899999998877665       6899999998532                       233456666667777 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+...+....   .....-.
T Consensus       125 g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~---~~~~~~~  197 (237)
T d1uzma1         125 GRMIFIGSVSGLWGI----GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERI---QQGALQF  197 (237)
T ss_dssp             EEEEEECCCCC---------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHH---HHHHGGG
T ss_pred             CceEEEcchhhccCC----cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHH---HHHHHhc
Confidence            78887 665443321    1245666799999877653       6899999999998765433211000   0000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ++   -  --+...+|+|.++..++.+..  -.|+.+.+-|
T Consensus       198 ~p---l--~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdG  233 (237)
T d1uzma1         198 IP---A--KRVGTPAEVAGVVSFLASEDASYISGAVIPVDG  233 (237)
T ss_dssp             CT---T--CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CC---C--CCCcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            11   0  125689999999999987653  2477888865

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.06  E-value=1.5e-05  Score=61.45  Aligned_cols=149  Identities=15%  Similarity=0.085  Sum_probs=93.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                       +...+.++...++.+ -
T Consensus        52 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~  130 (254)
T d1hdca_          52 AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-G  130 (254)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             ceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-C
Confidence            37789999999998887664       6899999997532                       233345555556666 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      -++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+........ ........ 
T Consensus       131 G~II~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~-~~~~~~~~-  204 (254)
T d1hdca_         131 GSIVNISSAAGLMGL----ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ-GEGNYPNT-  204 (254)
T ss_dssp             EEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC-STTSCTTS-
T ss_pred             Ceecccccchhcccc----cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHH-HHHHHhCC-
Confidence            68887 665443221    2245666799999877653       5899999999998765432211100 00000010 


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       +   -. +--+..+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       205 -p---l~-R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDG  240 (254)
T d1hdca_         205 -P---MG-RVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDG  240 (254)
T ss_dssp             -T---TS-SCB-CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -C---CC-CCCCCHHHHHHHHHHHhchhhCCCCCceEEeCC
Confidence             1   11 112357999999999987642  2478888875

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.05  E-value=4.8e-06  Score=64.16  Aligned_cols=155  Identities=14%  Similarity=0.064  Sum_probs=93.3

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGN   54 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~   54 (258)
                      .+...+++|++|.+++.++++       +.|++||.++...                   +    ...+.++..+++.+ 
T Consensus        48 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-  126 (248)
T d2d1ya1          48 IGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-  126 (248)
T ss_dssp             HTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-
T ss_pred             cCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-
Confidence            356788999999988777665       6899999997532                   2    23344555555555 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||.+-..+........ .... ...
T Consensus       127 ~G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~-~~~~-~~~  200 (248)
T d2d1ya1         127 GGAIVNVASVQGLFAE----QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALS-PDPE-RTR  200 (248)
T ss_dssp             CEEEEEECCGGGTSBC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC----------C
T ss_pred             cccccccccccccccc----cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcC-CCHH-HHH
Confidence            467887 655443221    2245566799999876653       6899999999988764332110000 0000 000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ...-+.....-+...+|+|.++..++.+..  -.|+.+.+-|
T Consensus       201 ~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDG  242 (248)
T d2d1ya1         201 RDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDG  242 (248)
T ss_dssp             HHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCc
Confidence            000000000125689999999999987642  2477888876

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.6e-05  Score=61.06  Aligned_cols=152  Identities=13%  Similarity=0.056  Sum_probs=92.7

Q ss_pred             CceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCCccEE
Q 025054            5 INCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGNIKRF   58 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~vk~~   58 (258)
                      .++..+.+|++|.++++++++   +.|++||.++...                   +    ...+.++....+.++-.++
T Consensus        52 ~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~I  131 (244)
T d1pr9a_          52 PGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAI  131 (244)
T ss_dssp             TTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceE
Confidence            467889999999999888876   6799999987532                   2    2234444433332214567


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+.......    +....|..+|+.++.+.+.       .++.+..|.||.+...+.......    .. ..-.+..
T Consensus       132 i~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~----~~-~~~~~~~  202 (244)
T d1pr9a_         132 VNVSSQCSQRAV----TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD----PH-KAKTMLN  202 (244)
T ss_dssp             EEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS----HH-HHHHHHT
T ss_pred             eecccccccccc----cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC----hH-HHHHHHh
Confidence            76 654433221    1234566699999877654       589999999999876544321110    00 0000000


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .--. --+...+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       203 ~~pl-~R~~~peevA~~v~fL~S~~a~~itG~~i~vDG  239 (244)
T d1pr9a_         203 RIPL-GKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEG  239 (244)
T ss_dssp             TCTT-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCC-CCCcCHHHHHHHHHHHhCchhCCcCCcEEEECc
Confidence            0000 126789999999999987652  2477888765

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.00  E-value=9.1e-06  Score=62.68  Aligned_cols=148  Identities=10%  Similarity=0.051  Sum_probs=92.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                       +...+.++...++.+ -
T Consensus        60 ~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~  138 (251)
T d2c07a1          60 ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-Y  138 (251)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-C
Confidence            37788999999998887665       6899999987532                       233355555666666 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      -++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+...+..      . ..-.
T Consensus       139 G~IVnisS~~~~~~~----~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~------~-~~~~  207 (251)
T d2c07a1         139 GRIINISSIVGLTGN----VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE------Q-IKKN  207 (251)
T ss_dssp             EEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH------H-HHHH
T ss_pred             eEEEEECCHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCH------H-HHHH
Confidence            68887 654332211    1244677799999877653       58999999999887654432110      0 0000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      +...--.. -+...+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       208 ~~~~~pl~-R~~~pedvA~~v~fL~S~~s~~itG~~i~vDG  247 (251)
T d2c07a1         208 IISNIPAG-RMGTPEEVANLACFLSSDKSGYINGRVFVIDG  247 (251)
T ss_dssp             HHTTCTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHhcCCCC-CCcCHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence            00000001 15689999999999987653 2 477888875

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.97  E-value=1.1e-05  Score=62.25  Aligned_cols=150  Identities=11%  Similarity=0.094  Sum_probs=92.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                       +...+.++...++.+ -
T Consensus        56 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~  134 (251)
T d1vl8a_          56 ETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-N  134 (251)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-S
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-c
Confidence            36678999999988877664       6899999998532                       233345555555555 4


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......   .+....|..+|+.++.+.+.       .|+.+..|.||++-..+.......    ..  ...
T Consensus       135 G~Ii~i~S~~~~~~~---~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~----~~--~~~  205 (251)
T d1vl8a_         135 PSIINIGSLTVEEVT---MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD----PE--KLD  205 (251)
T ss_dssp             CEEEEECCGGGTCCC---SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC----HH--HHH
T ss_pred             ccccccccchhcccc---CccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC----HH--HHH
Confidence            57776 554332211   11234566799999877653       689999999998876554321100    00  000


Q ss_pred             eccCCCce-eeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPK-AIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~-~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .... ..+ --+...+|+|++++.++.+..  -.|+.+.+-|
T Consensus       206 ~~~~-~~pl~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDG  246 (251)
T d1vl8a_         206 YMLK-RIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG  246 (251)
T ss_dssp             HHHH-TCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHh-cCCCCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCc
Confidence            0000 000 015678999999999987653  2477888865

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.97  E-value=1.5e-05  Score=61.04  Aligned_cols=149  Identities=11%  Similarity=-0.014  Sum_probs=92.1

Q ss_pred             cCceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhC
Q 025054            4 MINCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVG   53 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g   53 (258)
                      ..+++.+.+|++|++++.++++       +.|++||.++...                   +    ...+.++...++.+
T Consensus        48 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~  127 (242)
T d1ulsa_          48 AVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN  127 (242)
T ss_dssp             TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc
Confidence            3467889999999998887764       5899999997532                   2    22334444444455


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       -.+++. |+.+...     .+....|..+|+.++.+.+.       .|+.+..|.||++-..+......       ...
T Consensus       128 -~~~i~~~ss~~~~~-----~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~-------~~~  194 (242)
T d1ulsa_         128 -PGSIVLTASRVYLG-----NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE-------KVR  194 (242)
T ss_dssp             -CEEEEEECCGGGGC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH-------HHH
T ss_pred             -cceeeeeccccccC-----CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH-------HHH
Confidence             455555 5432211     12345677799999877653       58999999999887654432110       000


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      -.+...--. --+...+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       195 ~~~~~~~pl-~R~~~pedia~~v~fL~S~~s~~itG~~i~vDG  236 (242)
T d1ulsa_         195 EKAIAATPL-GRAGKPLEVAYAALFLLSDESSFITGQVLFVDG  236 (242)
T ss_dssp             HHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCCC-CCCCCHHHHHHHHHHHhchhhCCCCCcEEEECC
Confidence            000000000 115578999999999987652  2477888865

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=5.7e-06  Score=63.52  Aligned_cols=147  Identities=14%  Similarity=0.081  Sum_probs=94.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                       +...+.++...++.+ -
T Consensus        51 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~  129 (243)
T d1q7ba_          51 NGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-H  129 (243)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-C
Confidence            46778999999988877665       6899999987532                       233455555556665 4


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||.+-..+...+..       .....
T Consensus       130 G~II~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-------~~~~~  198 (243)
T d1q7ba_         130 GRIITIGSVVGTMGN----GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSD-------DQRAG  198 (243)
T ss_dssp             EEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-------HHHHH
T ss_pred             CEeeeecchhhcCCC----CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhh-------hHHHH
Confidence            67887 664332211    1245677799999877654       68999999999887654322110       00000


Q ss_pred             eccCCCce-eeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPK-AIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~-~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      +..  ..+ --+...+|+|.++..++++..  -.|+.+.+-|
T Consensus       199 ~~~--~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdG  238 (243)
T d1q7ba_         199 ILA--QVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNG  238 (243)
T ss_dssp             HHT--TCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHh--cCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            000  000 015689999999999997653  3578888865

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.96  E-value=5.6e-05  Score=58.36  Aligned_cols=148  Identities=11%  Similarity=0.054  Sum_probs=83.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------C-CcEEEEccCccc-----------------------hhchHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------P-VDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g-~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~   54 (258)
                      .+..+.+|++|++++.++++       | .|+++|.++...                       +...+.++...++.+ 
T Consensus        58 ~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-  136 (259)
T d1xq1a_          58 QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-  136 (259)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             ceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-
Confidence            47788999999887766543       4 799999998532                       223345555556666 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      --++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++-..+........   ..  . 
T Consensus       137 ~G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~---~~--~-  206 (259)
T d1xq1a_         137 CGNIIFMSSIAGVVSA----SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE---FK--K-  206 (259)
T ss_dssp             SCEEEEEC--------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------
T ss_pred             cccccccccccccccc----cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH---HH--H-
Confidence            567887 655433221    1244566799999877653       6899999999988765443211100   00  0 


Q ss_pred             EeccCCCce-eeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPK-AIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~-~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       .... ..+ --+...+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       207 -~~~~-~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDG  247 (259)
T d1xq1a_         207 -VVIS-RKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDG  247 (259)
T ss_dssp             -------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCC
T ss_pred             -HHHh-CCCCCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCC
Confidence             0000 001 125689999999999987642  2467777765

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.95  E-value=2.7e-05  Score=60.55  Aligned_cols=151  Identities=13%  Similarity=0.051  Sum_probs=91.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------------hhchHHHHHHHHHhC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------------VEDQFKLIAAIKEVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------------~~~~~~li~aa~~~g   53 (258)
                      .+.++.+|++|++++.++++       +.|++||.++...                         +...+.++...++.+
T Consensus        55 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~  134 (268)
T d2bgka1          55 VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK  134 (268)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC
Confidence            37788999999998888765       6899999987421                         223344555555555


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCc-cchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAK-SGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~-~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                       -.++|. |+.......    .+.. .|..+|+.++.+.+.       .|+.+..|.||++-..+.......     ...
T Consensus       135 -~g~ii~iss~~~~~~~----~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~  204 (268)
T d2bgka1         135 -KGSIVFTASISSFTAG----EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-----DSS  204 (268)
T ss_dssp             -CEEEEEECCGGGTCCC----TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-----CHH
T ss_pred             -CCCccccccccccccc----cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcC-----CHH
Confidence             446665 554332211    1223 345589999877653       589999999998877654332110     000


Q ss_pred             ce-EeccCC-CceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          125 NI-LFYGDG-QPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       125 ~~-~~~g~g-~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      .. ...... ...-.+...+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       205 ~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDG  250 (268)
T d2bgka1         205 RVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDG  250 (268)
T ss_dssp             HHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECc
Confidence            00 000000 001126689999999999997653 2 478888876

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.93  E-value=1.6e-05  Score=61.59  Aligned_cols=149  Identities=13%  Similarity=0.086  Sum_probs=92.7

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +..+.+|++|++++.++++       +.|++||.++...                       +...+.++...++.+.-.
T Consensus        59 ~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~  138 (261)
T d1geea_          59 AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKG  138 (261)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccc
Confidence            6678999999988877665       6899999997532                       233455555566666234


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+.......    ... .-.+
T Consensus       139 ~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~----~~~-~~~~  209 (261)
T d1geea_         139 TVINMSSVHEKIPW----PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD----PEQ-RADV  209 (261)
T ss_dssp             EEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS----HHH-HHHH
T ss_pred             cccccccchhcccC----ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC----HHH-HHHH
Confidence            4665 665433221    1244566799999877653       589999999998876543211000    000 0000


Q ss_pred             ccCCCce-eeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPK-AIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~-~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..  ..+ --+...+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       210 ~~--~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDG  248 (261)
T d1geea_         210 ES--MIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADG  248 (261)
T ss_dssp             HT--TCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             Hh--cCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            00  000 015678999999999987653  2578888876

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.92  E-value=1.2e-05  Score=61.73  Aligned_cols=151  Identities=14%  Similarity=0.093  Sum_probs=92.4

Q ss_pred             CceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCccEE
Q 025054            5 INCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNIKRF   58 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~vk~~   58 (258)
                      .++..+.+|++|+++++++++   +.|++||.++...                   +.....+.+    ...+.+.-.++
T Consensus        50 ~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~i  129 (242)
T d1cyda_          50 PGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSI  129 (242)
T ss_dssp             TTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcc
Confidence            468889999999999998887   5799999987532                   222333333    32333313467


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC-ceEec
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE-NILFY  129 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  129 (258)
                      |. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+........  ..... .-..|
T Consensus       130 i~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~p  203 (242)
T d1cyda_         130 VNVSSMVAHVTF----PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADP--EFARKLKERHP  203 (242)
T ss_dssp             EEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCH--HHHHHHHHHST
T ss_pred             cccchhhccccC----CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCH--HHHHHHHhcCC
Confidence            76 655433221    1234566799999877754       5899999999988765433211100  00000 00011


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                          .. -+...+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       204 ----l~-R~~~peeva~~v~fL~S~~s~~itG~~i~vDG  237 (242)
T d1cyda_         204 ----LR-KFAEVEDVVNSILFLLSDRSASTSGGGILVDA  237 (242)
T ss_dssp             ----TS-SCBCHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred             ----CC-CCcCHHHHHHHHHHHhCchhcCcCCceEEeCc
Confidence                01 25688999999999987642  2477888875

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.90  E-value=2.7e-05  Score=59.91  Aligned_cols=149  Identities=13%  Similarity=0.098  Sum_probs=90.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                   +.+.    +.++..+++.+ -
T Consensus        55 ~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~-~  133 (251)
T d1zk4a1          55 QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-L  133 (251)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-S
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcC-C
Confidence            57889999999988877665       6899999997532                   2333    33444444555 3


Q ss_pred             -cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           56 -KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        56 -k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                       .++|. |+.......    +....|..+|+.++.+.+         ..|+.+..|.||++...+...............
T Consensus       134 gg~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~  209 (251)
T d1zk4a1         134 GASIINMSSIEGFVGD----PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRT  209 (251)
T ss_dssp             CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTT
T ss_pred             CCceEeeeccceeccC----CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHh
Confidence             36676 665433221    123456669998865433         357999999999987654332111000000000


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      .  +|   -.  -+...+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       210 ~--~p---l~--R~~~pedvA~~v~fL~S~~s~~itG~~i~vDG  246 (251)
T d1zk4a1         210 K--TP---MG--HIGEPNDIAYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             T--CT---TS--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             C--CC---CC--CCcCHHHHHHHHHHHhCchhCCCcCcEEEECc
Confidence            0  11   01  15689999999999987643 2 477888875

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=1e-06  Score=68.40  Aligned_cols=157  Identities=11%  Similarity=0.067  Sum_probs=92.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------hhchHHHHHHHHHhC--CccEEEc-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------VEDQFKLIAAIKEVG--NIKRFFP-   60 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g--~vk~~v~-   60 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...               +...+.++..+++.+  +-.++|. 
T Consensus        55 ~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~i  134 (254)
T d2gdza1          55 KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINM  134 (254)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEE
T ss_pred             cEEEEEeecCCHHHHHHHHHHHHHHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEee
Confidence            47788999999998887664       6899999998643               223344444444432  1245777 


Q ss_pred             CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054           61 TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD  131 (258)
Q Consensus        61 S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  131 (258)
                      |+.......    +....|..+|+.++.+.+         ..|+.+..|.||.+-..++..+.................+
T Consensus       135 sS~~~~~~~----~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  210 (254)
T d2gdza1         135 SSLAGLMPV----AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD  210 (254)
T ss_dssp             CCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH
T ss_pred             ccHhhccCC----CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHh
Confidence            665443221    123456679998876543         2689999999998865443221100000000000000000


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                      ......+...+|+|++++.+++++.-.|+.+.+-|
T Consensus       211 ~~p~~r~~~pedvA~~v~fL~s~~~itG~~i~VdG  245 (254)
T d2gdza1         211 MIKYYGILDPPLIANGLITLIEDDALNGAIMKITT  245 (254)
T ss_dssp             HHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEET
T ss_pred             cCCCCCCcCHHHHHHHHHHHHcCCCCCCCEEEECC
Confidence            00001256789999999999987654678888876

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.87  E-value=2.7e-05  Score=60.10  Aligned_cols=148  Identities=11%  Similarity=0.121  Sum_probs=92.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------------------hhchHHHHHHHHHhCCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                      +...+.++...++.+ -.
T Consensus        61 ~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g  139 (255)
T d1fmca_          61 QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GG  139 (255)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-cc
Confidence            36788999999988777654       6899999997532                      223345555556666 45


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+........   . ...  +
T Consensus       140 ~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e---~-~~~--~  209 (255)
T d1fmca_         140 VILTITSMAAENKN----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE---I-EQK--M  209 (255)
T ss_dssp             EEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH---H-HHH--H
T ss_pred             ccccccccchhccc----cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHH---H-HHH--H
Confidence            6665 665433221    1244566799999877653       6899999999988764432211000   0 000  0


Q ss_pred             ccCCCce-eeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          129 YGDGQPK-AIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       129 ~g~g~~~-~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..  ..+ --+...+|+|.+++.++++..  -.|+.+.+-|
T Consensus       210 ~~--~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDG  248 (255)
T d1fmca_         210 LQ--HTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSG  248 (255)
T ss_dssp             HH--TCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             Hh--cCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence            00  000 015678999999999987643  2577888876

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.86  E-value=7.6e-06  Score=63.39  Aligned_cols=154  Identities=14%  Similarity=0.134  Sum_probs=91.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhc----hHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VED----QFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~----~~~li~aa~~~g~   54 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                    +.+    .+.++...++.+ 
T Consensus        56 ~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-  134 (258)
T d1iy8a_          56 EVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-  134 (258)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             eEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-
Confidence            36678999999998877664       6899999987421                    222    334444445555 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-CCCCCCCCCCc
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-QPGATAPPREN  125 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-~~~~~~~~~~~  125 (258)
                      -.++|. |+.......    +....|..+|+.+..+.+.       .|+.+..|.||.+...+..... ...... ....
T Consensus       135 ~G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~-~~~~  209 (258)
T d1iy8a_         135 SGMVVNTASVGGIRGI----GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPEN-PRKA  209 (258)
T ss_dssp             CCEEEEECCGGGTSBC----SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTC-HHHH
T ss_pred             CCCCcccccHhhccCC----CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCccc-HHHH
Confidence            457887 665443221    2245666799999876653       5899999999998764432110 000000 0000


Q ss_pred             e-EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          126 I-LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       126 ~-~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      . .+...--.+ -+...+|+|.++..++.+. . -.|+.+.+-|
T Consensus       210 ~~~~~~~~pl~-R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDG  252 (258)
T d1iy8a_         210 AEEFIQVNPSK-RYGEAPEIAAVVAFLLSDDASYVNATVVPIDG  252 (258)
T ss_dssp             HHHHHTTCTTC-SCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHhcCCCC-CCcCHHHHHHHHHHHhCchhcCCcCceEEcCc
Confidence            0 000000001 1568899999999998764 2 2477888876

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=7.3e-05  Score=58.89  Aligned_cols=150  Identities=9%  Similarity=0.035  Sum_probs=89.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                   +.+...+.+    ..++.+ -
T Consensus        67 ~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~  145 (297)
T d1yxma1          67 RVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-G  145 (297)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-C
T ss_pred             eEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-c
Confidence            46778999999998887664       6899999987532                   233333333    334444 4


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-CCCCCCCCCCCce
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-AQPGATAPPRENI  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-~~~~~~~~~~~~~  126 (258)
                      .++|. |+.+.. .    .+....|..+|+.++.+.+.       .|+.+..|.||.+........ ............-
T Consensus       146 g~Ii~~ss~~~~-~----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  220 (297)
T d1yxma1         146 GSIVNIIVPTKA-G----FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ  220 (297)
T ss_dssp             EEEEEECCCCTT-C----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGG
T ss_pred             cccccccccccc-c----ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHh
Confidence            55665 432221 1    11234555699999877654       589999999999876443211 0000000000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .++-   .  -+...+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       221 ~~pl---g--R~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDG  257 (297)
T d1yxma1         221 KIPA---K--RIGVPEEVSSVVCFLLSPAASFITGQSVDVDG  257 (297)
T ss_dssp             GSTT---S--SCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCC---C--CCcCHHHHHHHHHHHhCchhcCcCCcEEEeCc
Confidence            1110   1  25678999999999997652  2578888876

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.82  E-value=2.3e-05  Score=60.10  Aligned_cols=147  Identities=12%  Similarity=0.026  Sum_probs=92.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                       +...+.++..+++.+ -
T Consensus        52 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~  130 (244)
T d1edoa_          52 QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-K  130 (244)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-C
Confidence            36678999999988877655       6899999997532                       234455666666666 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      -++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++-..+...+..      .  ...
T Consensus       131 G~IVnisS~~~~~~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~------~--~~~  198 (244)
T d1edoa_         131 GRIINIASVVGLIGN----IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE------D--MEK  198 (244)
T ss_dssp             EEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH------H--HHH
T ss_pred             cEEEEEcChhhcCCC----CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhH------H--HHH
Confidence            68887 665432211    1234566799999877653       68999999999887544322110      0  000


Q ss_pred             eccCCCce-eeeeccchHHHHHHHHhcCC--C-CCCceEEEcC
Q 025054          128 FYGDGQPK-AIFNKEEDIATYTIKAVDDP--R-TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~-~~~v~~~D~a~~~~~~l~~~--~-~~~~~~~l~g  166 (258)
                      .... ..+ --+...+|+|.+++.++.++  . -.|+.+.+-|
T Consensus       199 ~~~~-~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdG  240 (244)
T d1edoa_         199 KILG-TIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             HHHT-SCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             HHHh-cCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCC
Confidence            0000 000 11568899999999986433  2 2477888865

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.81  E-value=1.9e-05  Score=61.03  Aligned_cols=161  Identities=14%  Similarity=0.133  Sum_probs=94.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                   +.+...+.+    ...+.++-
T Consensus        52 ~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~  131 (256)
T d1k2wa_          52 AACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRG  131 (256)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred             ceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccC
Confidence            46778999999998887765       6899999998532                   223333333    33333323


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCC-C-CCCCCCC-
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQP-G-ATAPPRE-  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~-~-~~~~~~~-  124 (258)
                      -++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++-.......... . ....... 
T Consensus       132 g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~  207 (256)
T d1k2wa_         132 GKIINMASQAGRRGE----ALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGE  207 (256)
T ss_dssp             EEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTH
T ss_pred             Cccccccchhhcccc----ccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHH
Confidence            57887 665443321    1234566799999877653       589999999998776543211000 0 0000000 


Q ss_pred             ceEeccCCCce-eeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccC
Q 025054          125 NILFYGDGQPK-AIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYS  172 (258)
Q Consensus       125 ~~~~~g~g~~~-~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t  172 (258)
                      ....... ..+ --+...+|+|.+++.++.+..  -.|+.+.+-| |..+|
T Consensus       208 ~~~~~~~-~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDG-G~~ms  256 (256)
T d1k2wa_         208 KKRQVGA-AVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDG-GNWMS  256 (256)
T ss_dssp             HHHHHHH-HSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEEST-TSSCC
T ss_pred             HHHHHHh-cCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECc-chhhC
Confidence            0000000 000 115688999999999887653  2478888876 54443

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.79  E-value=4.1e-05  Score=58.20  Aligned_cols=151  Identities=16%  Similarity=0.141  Sum_probs=93.3

Q ss_pred             ccCceeEEeccCCC-HHHHHHhhCCCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccEE
Q 025054            3 YMINCLIAQGDLHD-HESLVKAIKPVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKRF   58 (258)
Q Consensus         3 ~~~gv~~~~~D~~d-~~~l~~al~g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~~   58 (258)
                      ++.+.+.+.+|+++ .+.+.+.+.+.|++||.++...                       +...+.++...++.+ -.++
T Consensus        42 ~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~i  120 (234)
T d1o5ia_          42 KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRI  120 (234)
T ss_dssp             HHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred             HhcCCcEEEcchHHHHHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccc
Confidence            34566788899875 5677788889999999997532                       233455566666666 5577


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      |. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+.......       .......
T Consensus       121 i~i~S~~~~~~~----~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~-------~~~~~~~  189 (234)
T d1o5ia_         121 VAITSFSVISPI----ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE-------EKKKQVE  189 (234)
T ss_dssp             EEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH-------HHHHHHH
T ss_pred             cccccccccccc----cccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH-------HHHHHHH
Confidence            76 554332221    1234455689998866543       589999999998876543221100       0000000


Q ss_pred             CCCce-eeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          131 DGQPK-AIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~-~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      . ..+ --+...+|+|.++..++.+..  -.|+.+.+-|
T Consensus       190 ~-~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDG  227 (234)
T d1o5ia_         190 S-QIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDG  227 (234)
T ss_dssp             T-TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             h-cCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECc
Confidence            0 000 126689999999999987643  2478888865

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=3.2e-05  Score=60.65  Aligned_cols=154  Identities=17%  Similarity=0.206  Sum_probs=89.0

Q ss_pred             ceeEEeccCCCHHHHHHhhC-----CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-----PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKR   57 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-----g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~   57 (258)
                      .+..+.+|++|.+++.++++     ..|++++.++...                       +...+.++...++.+ -.+
T Consensus        58 ~~~~~~~Dv~~~~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~  136 (285)
T d1jtva_          58 SLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGR  136 (285)
T ss_dssp             SEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred             ceEEEeccccchHhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCc
Confidence            47889999999999888764     4799999987532                       233455566666776 567


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCC-CC-CCCC-Cce
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPG-AT-APPR-ENI  126 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~-~~-~~~~-~~~  126 (258)
                      +|. ||..+....    +....|..+|+.++.+.+.       .|+.++.|.||++-..+........ .. .... ...
T Consensus       137 Iv~isS~~g~~~~----~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  212 (285)
T d1jtva_         137 VLVTGSVGGLMGL----PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTF  212 (285)
T ss_dssp             EEEEEEGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHH
T ss_pred             eEEEechhhcCCC----CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHH
Confidence            887 554433221    1244566799999876543       6899999999988765543211100 00 0000 000


Q ss_pred             ----EeccC-CC-ceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          127 ----LFYGD-GQ-PKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       127 ----~~~g~-g~-~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                          ..... .. ......+.+|+|++++.+++.++  .+..++.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~--p~~ry~~g  256 (285)
T d1jtva_         213 HRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK--PTLRYFTT  256 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS--CCSEEESC
T ss_pred             HHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCC--CCeEEecH
Confidence                00000 00 00124578999999999998763  33355664

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.77  E-value=6.2e-05  Score=58.07  Aligned_cols=151  Identities=10%  Similarity=0.029  Sum_probs=88.5

Q ss_pred             eeEEeccCCCHHHHHHhhC-------C-CcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------P-VDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g-~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      +..+.+|++|.++++++++       | .|+++++++...                       +...+.++...++.+ .
T Consensus        57 ~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~  135 (258)
T d1ae1a_          57 VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-N  135 (258)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-S
T ss_pred             ceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-c
Confidence            5678899999988766553       3 789999887532                       122344444555666 6


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-  126 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-  126 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+........  ....... 
T Consensus       136 g~ii~isS~~~~~~~----~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~--~~~~~~~~  209 (258)
T d1ae1a_         136 GNVIFLSSIAGFSAL----PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN--PHQKEEID  209 (258)
T ss_dssp             EEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------CHHHHH
T ss_pred             ccccccccccccccc----ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhh--hhhHHHHH
Confidence            78887 665443221    1234555699999877654       5899999999998765543221100  0000000 


Q ss_pred             Eec-cCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          127 LFY-GDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       127 ~~~-g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      .+. ..+-.  -+...+|+|.+++.++.+. . -.|+.+.+-|
T Consensus       210 ~~~~~~plg--R~~~pediA~~v~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         210 NFIVKTPMG--RAGKPQEVSALIAFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             HHHHHSTTC--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhcCCCC--CCcCHHHHHHHHHHHhChhhCCCcCcEEEeCC
Confidence            000 00011  1678999999999999764 2 2477788765

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.74  E-value=5.3e-05  Score=58.67  Aligned_cols=156  Identities=13%  Similarity=0.057  Sum_probs=87.2

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------------hhchHHHHHHHH
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------------VEDQFKLIAAIK   50 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------------~~~~~~li~aa~   50 (258)
                      .++..+.+|++|.+++.++++       +.|++||.++...                           +...+.++...+
T Consensus        57 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~  136 (264)
T d1spxa_          57 QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLS  136 (264)
T ss_dssp             GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccc
Confidence            348899999999988887665       6899999987420                           223344444555


Q ss_pred             HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC
Q 025054           51 EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP  122 (258)
Q Consensus        51 ~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~  122 (258)
                      +.+ -..++. |+.+.....    +....|..+|+.++.+.+.       .|+.+..|.||++-..+.............
T Consensus       137 ~~~-g~iI~~~S~~~~~~~~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~  211 (264)
T d1spxa_         137 STK-GEIVNISSIASGLHAT----PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKK  211 (264)
T ss_dssp             HHT-CEEEEECCTTSSSSCC----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-------------
T ss_pred             ccc-CcceeeeeeccccccC----CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHH
Confidence            544 244444 433322211    1233455699999877653       589999999998876554322111000000


Q ss_pred             CC-ceEeccCCCce-eeeeccchHHHHHHHHhcCC--C-CCCceEEEcC
Q 025054          123 RE-NILFYGDGQPK-AIFNKEEDIATYTIKAVDDP--R-TLNKTLYLRP  166 (258)
Q Consensus       123 ~~-~~~~~g~g~~~-~~~v~~~D~a~~~~~~l~~~--~-~~~~~~~l~g  166 (258)
                      .. ....... ..+ .-+...+|+|.+++.+++++  . -.|+.+.+-|
T Consensus       212 ~~~~~~~~~~-~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDG  259 (264)
T d1spxa_         212 FYSTMATMKE-CVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG  259 (264)
T ss_dssp             -HHHHHHHHH-HCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             HHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCC
Confidence            00 0000000 000 01567899999999998754  2 2577888865

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.70  E-value=0.00013  Score=56.13  Aligned_cols=132  Identities=20%  Similarity=0.226  Sum_probs=84.2

Q ss_pred             eeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEEc-
Q 025054            7 CLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFFP-   60 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v~-   60 (258)
                      +.++.+|++|.+++.++++      +.|.|+|+++...                   +.+..++..+....+ ..++|. 
T Consensus        64 v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~  142 (259)
T d2fr1a1          64 TTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLF  142 (259)
T ss_dssp             EEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEE
T ss_pred             ccccccccchHHHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeee
Confidence            6788999999999888765      3688999987532                   345566766666666 778887 


Q ss_pred             CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceee
Q 025054           61 TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAI  137 (258)
Q Consensus        61 S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  137 (258)
                      |+.......    +....|..+|..++.+.+   ..|++++.|.||.+.+.....-  .    . ...+.  ..|   +.
T Consensus       143 SS~a~~~g~----~~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~--~----~-~~~~~--~~G---~~  206 (259)
T d2fr1a1         143 SSFASAFGA----PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG--P----V-ADRFR--RHG---VI  206 (259)
T ss_dssp             EEHHHHTCC----TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------------CT--TTT---EE
T ss_pred             cchhhccCC----cccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccc--h----H-HHHHH--hcC---CC
Confidence            654332221    124457779998876554   4799999999998876433210  0    0 00110  111   34


Q ss_pred             eeccchHHHHHHHHhcCC
Q 025054          138 FNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       138 ~v~~~D~a~~~~~~l~~~  155 (258)
                      .++.+++++++..++..+
T Consensus       207 ~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         207 EMPPETACRALQNALDRA  224 (259)
T ss_dssp             CBCHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHhCC
Confidence            567899999999988775

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.61  E-value=4e-05  Score=59.24  Aligned_cols=151  Identities=9%  Similarity=0.034  Sum_probs=90.9

Q ss_pred             ceeEEeccCCCHHHHHHhhC--------CCcEEEEccCccc-------------------hh----chHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK--------PVDVVISAVGRTE-------------------VE----DQFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~~~~-------------------~~----~~~~li~aa~~~g~   54 (258)
                      .+..+.+|++|++++.++++        ..|++||.++...                   +.    ..+.++...++.+ 
T Consensus        58 ~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-  136 (259)
T d2ae2a_          58 KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-  136 (259)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-
T ss_pred             CceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-
Confidence            36778999999887776543        3799999998532                   22    2344444455555 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      -.++|. |+.......    +....|..+|+.++.+.+.       .++.+..|.||++-..+........   .....+
T Consensus       137 ~G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~  209 (259)
T d2ae2a_         137 RGNVVFISSVSGALAV----PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDP---EQKENL  209 (259)
T ss_dssp             SEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSH---HHHHHH
T ss_pred             cccccccccccccccc----ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhch---hhHHHH
Confidence            467887 654433221    1244566799999877653       5899999999988764432211100   000000


Q ss_pred             -Eec-cCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          127 -LFY-GDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       127 -~~~-g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                       .+. ..+-.  -+...+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       210 ~~~~~~~pl~--R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  251 (259)
T d2ae2a_         210 NKLIDRCALR--RMGEPKELAAMVAFLCFPAASYVTGQIIYVDG  251 (259)
T ss_dssp             HHHHHTSTTC--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCCCC--CCcCHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence             000 00011  15678999999999987642 2 477888865

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.60  E-value=0.00015  Score=55.73  Aligned_cols=150  Identities=16%  Similarity=0.108  Sum_probs=89.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|.+++.++++       +.|++||.++...                   +    ...+.++...++.+  
T Consensus        53 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--  130 (253)
T d1hxha_          53 RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--  130 (253)
T ss_dssp             TEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--
T ss_pred             CeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--
Confidence            36678899999888777665       6799999998532                   2    22344444444444  


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      -++|. |+.......    +....|..+|+.++.+.+.         .++.+..|.||++...+........   .....
T Consensus       131 G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~---~~~~~  203 (253)
T d1hxha_         131 GSIINMASVSSWLPI----EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG---VSKEM  203 (253)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT---CCHHH
T ss_pred             CceecccchhhhcCc----cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch---hhHHH
Confidence            56776 665443221    1234566799998866542         2488999999998765432111000   00000


Q ss_pred             e-EeccCCCcee-eeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          126 I-LFYGDGQPKA-IFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       126 ~-~~~g~g~~~~-~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      . ...  ...++ -+...+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       204 ~~~~~--~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDG  246 (253)
T d1hxha_         204 VLHDP--KLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADN  246 (253)
T ss_dssp             HBCBT--TTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHhCc--cccccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECc
Confidence            0 000  01111 26678999999999987653 2 477788864

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.60  E-value=0.00035  Score=55.02  Aligned_cols=156  Identities=12%  Similarity=0.023  Sum_probs=95.3

Q ss_pred             EeccCCCHHHHHHhh-------CCCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccEEE
Q 025054           10 AQGDLHDHESLVKAI-------KPVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKRFF   59 (258)
Q Consensus        10 ~~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~~v   59 (258)
                      ...|+.|.+++.+.+       .+.|++||.++...                       +...+.++...++.+ --++|
T Consensus        67 ~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV  145 (302)
T d1gz6a_          67 AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRII  145 (302)
T ss_dssp             EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEE
T ss_pred             cccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEE
Confidence            445666655544433       37899999998532                       234456666666666 56888


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD  131 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  131 (258)
                      . |+..+....    +....|..+|+.+..+.+.       .|+.+..|.||.+-......+                  
T Consensus       146 ~isS~~~~~~~----~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~------------------  203 (302)
T d1gz6a_         146 MTASASGIYGN----FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM------------------  203 (302)
T ss_dssp             EECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS------------------
T ss_pred             EeCChhhcCCC----CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC------------------
Confidence            7 664332211    1245677799999877653       589999999986532211110                  


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcC------------------CCCccCHHHHHHHHHHHhCCcc
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRP------------------PKNIYSFKELVALWEKKIGKTL  188 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g------------------~~~~~t~~e~~~~~~~~~g~~~  188 (258)
                      .+........+|+|.+++.++.+.. ..|+.+.+.|                  .+...|..++++.+.++....-
T Consensus       204 ~~~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~~  279 (302)
T d1gz6a_         204 PEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSN  279 (302)
T ss_dssp             CHHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTT
T ss_pred             cHhhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCccc
Confidence            0111224567999999999886542 2345444322                  1245788999999988876443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.47  E-value=0.00011  Score=56.35  Aligned_cols=136  Identities=10%  Similarity=-0.017  Sum_probs=78.0

Q ss_pred             CCCcEEEEccCccc------------------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccc
Q 025054           25 KPVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSG   79 (258)
Q Consensus        25 ~g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~   79 (258)
                      .+.|++||.++...                        +...+.++...++.+ --++|. |+.......    +....|
T Consensus        70 G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~----~~~~~Y  144 (252)
T d1zmta1          70 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPW----KELSTY  144 (252)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCC----TTCHHH
T ss_pred             CCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccccc----cccccc
Confidence            37899999876421                        122344555556655 457887 665443221    123456


Q ss_pred             hhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCce-eeeeccchHHHHHHHH
Q 025054           80 YARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPK-AIFNKEEDIATYTIKA  151 (258)
Q Consensus        80 ~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~v~~~D~a~~~~~~  151 (258)
                      ..+|+.++.+.+.       .|+.+..|.||++.......+.................. ..+ --+...+|+|.+++.+
T Consensus       145 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~-~~pl~R~g~pedvA~~v~fL  223 (252)
T d1zmta1         145 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK-VTALQRLGTQKELGELVAFL  223 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH-HSSSSSCBCHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHh-cCCCCCCcCHHHHHHHHHHH
Confidence            6799999877653       689999999999876544322100000000000000000 000 0156899999999999


Q ss_pred             hcCCC--CCCceEEEcC
Q 025054          152 VDDPR--TLNKTLYLRP  166 (258)
Q Consensus       152 l~~~~--~~~~~~~l~g  166 (258)
                      +++..  -.|+.+.+-|
T Consensus       224 ~S~~s~~iTG~~i~vdG  240 (252)
T d1zmta1         224 ASGSCDYLTGQVFWLAG  240 (252)
T ss_dssp             HTTSCGGGTTCEEEEST
T ss_pred             hCchhcCCcCCeEEECC
Confidence            97753  2478888875

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.41  E-value=0.0003  Score=54.12  Aligned_cols=153  Identities=12%  Similarity=0.046  Sum_probs=89.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                   +    ...+.++....+.+.-
T Consensus        60 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~  139 (260)
T d1h5qa_          60 KTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQK  139 (260)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccc
Confidence            46778999999998877764       6899999987531                   2    2234444444444413


Q ss_pred             cEEEc-CCCCCCCCC---CCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           56 KRFFP-TEYGSNVDA---GHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~---~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      .+++. |+.......   ....+....|..+|+.++.+.+.       .|+.+..|.||.+-.........      .. 
T Consensus       140 g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~------~~-  212 (260)
T d1h5qa_         140 GSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK------KI-  212 (260)
T ss_dssp             EEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH------HH-
T ss_pred             eEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCH------HH-
Confidence            44443 433221111   01111234566799999877653       68999999999887654332110      00 


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      .-.+...--.. -+...+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       213 ~~~~~~~~pl~-R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  255 (260)
T d1h5qa_         213 RDHQASNIPLN-RFAQPEEMTGQAILLLSDHATYMTGGEYFIDG  255 (260)
T ss_dssp             HHHHHHTCTTS-SCBCGGGGHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             HHHHHhcCCCC-CCcCHHHHHHHHHHHhcchhCCCcCceEEECC
Confidence            00000000001 15689999999999987653 2 477888875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.36  E-value=0.00011  Score=56.68  Aligned_cols=155  Identities=14%  Similarity=0.091  Sum_probs=88.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v   55 (258)
                      .+..+.+|++|++++.+.++       +.|++||.++...                   +.....+++++..    .|  
T Consensus        57 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g--  134 (259)
T d1ja9a_          57 QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGG--  134 (259)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEE--
T ss_pred             CceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCC--
Confidence            46778999999988887665       6799999998642                   2233344444433    33  


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC----CCCCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA----QPGATAPPR  123 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~----~~~~~~~~~  123 (258)
                      .-++. |+.+....    .+....|..+|+.++.+.+.       .|+.+..|.||++...+.....    .........
T Consensus       135 ~~iii~s~~~~~~~----~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  210 (259)
T d1ja9a_         135 RIILTSSIAAVMTG----IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQ  210 (259)
T ss_dssp             EEEEECCGGGTCCS----CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCH
T ss_pred             cccccccccccccC----CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCH
Confidence            12222 44433221    12244566699999877654       5899999999998754321100    000000000


Q ss_pred             Cc-eEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          124 EN-ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       124 ~~-~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      .. ....-......-+...+|+|+++..++++.. . .|+.+.+-|
T Consensus       211 ~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDG  256 (259)
T d1ja9a_         211 EKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTG  256 (259)
T ss_dssp             HHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCC
Confidence            00 0000000000126789999999999998763 2 467777765

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.30  E-value=0.00065  Score=51.99  Aligned_cols=157  Identities=13%  Similarity=0.140  Sum_probs=90.7

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHH----HHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFK----LIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~----li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                   +.+...    ++...++.++-
T Consensus        51 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~  130 (255)
T d1gega_          51 HAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG  130 (255)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred             cEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccc
Confidence            36778999999998887654       6899999997532                   233333    44444455424


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCC--CCCCCCCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPG--ATAPPREN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~--~~~~~~~~  125 (258)
                      .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+...+....  ........
T Consensus       131 g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  206 (255)
T d1gega_         131 GKIINACSQAGHVGN----PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGY  206 (255)
T ss_dssp             EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTH
T ss_pred             cccccccchhhcccC----cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchh
Confidence            56776 665443221    1234556699999877653       5899999999988654322110000  00000000


Q ss_pred             -eEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          126 -ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       126 -~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                       ..-.....-.--+...+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       207 ~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDG  250 (255)
T d1gega_         207 GTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG  250 (255)
T ss_dssp             HHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecC
Confidence             0000000000015679999999999987643 2 477888875

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.0002  Score=54.61  Aligned_cols=157  Identities=13%  Similarity=0.075  Sum_probs=91.9

Q ss_pred             cCceeEEeccCCCHHHHHHhh---CCCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccE
Q 025054            4 MINCLIAQGDLHDHESLVKAI---KPVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKR   57 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~al---~g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~   57 (258)
                      ..+++....|+++.+.....+   .+.|+++|+++...                       +...+.++...++.+ --+
T Consensus        49 ~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~  127 (245)
T d2ag5a1          49 YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGN  127 (245)
T ss_dssp             STTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred             ccCCceeeeeccccccccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-Cce
Confidence            356778888888776555544   47899999988532                       233345555555555 557


Q ss_pred             EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054           58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY  129 (258)
Q Consensus        58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (258)
                      +|. |+......   +.+....|..+|+.++.+.+.       .|+.+..|.||.+-..+........ .......-.+.
T Consensus       128 Ii~isS~~~~~~---~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~~~  203 (245)
T d2ag5a1         128 IINMSSVASSVK---GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQAR-GNPEEARNDFL  203 (245)
T ss_dssp             EEEECCSBTTTB---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHS-SSHHHHHHHHH
T ss_pred             eeeeechhhccC---CccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhh-hhhHHHHHHHH
Confidence            776 55433211   112345677799999988764       5899999999988654332110000 00000000000


Q ss_pred             cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      .. ...--+...+|+|.++..++.+..  -.|+.+.+-|
T Consensus       204 ~~-~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDG  241 (245)
T d2ag5a1         204 KR-QKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (245)
T ss_dssp             HT-CTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             hc-CCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCC
Confidence            00 000126688999999999998653  2477788865

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00036  Score=53.56  Aligned_cols=141  Identities=17%  Similarity=0.142  Sum_probs=81.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCC-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGN-   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~-   54 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                   +    ...+.++...++.+. 
T Consensus        62 ~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~  141 (257)
T d1xg5a_          62 TLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD  141 (257)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccC
Confidence            36778999999998877654       6899999997532                   2    223344444445431 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      -.++|. |+.......+  ......|..+|+.++.+.+         ..++.+..|.||.+-..+...... .  .....
T Consensus       142 ~g~Ii~isS~~~~~~~p--~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~-~--~~~~~  216 (257)
T d1xg5a_         142 DGHIININSMSGHRVLP--LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD-K--DPEKA  216 (257)
T ss_dssp             SCEEEEECCGGGTSCCS--CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT-T--CHHHH
T ss_pred             CCceEEEechHhcCCCC--CcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcCh-h--hHHHH
Confidence            246776 6543321111  1112235568999876653         257889999998766544322111 0  00000


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR  156 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~  156 (258)
                      ...++     ...+...+|+|+++..++.++.
T Consensus       217 ~~~~~-----~~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         217 AATYE-----QMKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHC--------CBCHHHHHHHHHHHHHSCT
T ss_pred             HhcCC-----CCCCcCHHHHHHHHHHHhCChh
Confidence            00111     1236789999999999998763

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.22  E-value=0.00077  Score=52.65  Aligned_cols=153  Identities=10%  Similarity=0.056  Sum_probs=85.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|.+++.++++       +.|+++|+++...                   ....    ...+......+.-
T Consensus        76 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  155 (294)
T d1w6ua_          76 KVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG  155 (294)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccccccccc
Confidence            36778899999998876554       6899999998532                   1111    1122222222213


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      ..++. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++............    ......
T Consensus       156 ~~i~~~ss~~~~~~~----~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~~~  227 (294)
T d1w6ua_         156 AAFLSITTIYAETGS----GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPT----GTFEKE  227 (294)
T ss_dssp             EEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTT----SHHHHH
T ss_pred             ccccccccchhhhcc----cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCc----HHHHHH
Confidence            34444 443222111    1234566799999877764       5899999999998765433211100    000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPK  168 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~  168 (258)
                      +... .-..-+...+|+|.++..++.+..  -.|+.+.+-| |
T Consensus       228 ~~~~-~pl~R~~~pediA~~v~fL~sd~s~~itG~~i~vDG-G  268 (294)
T d1w6ua_         228 MIGR-IPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDG-G  268 (294)
T ss_dssp             HHTT-CTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST-T
T ss_pred             Hhhc-CCCCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECC-C
Confidence            0000 000125678999999999997653  2577888876 5

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00044  Score=52.64  Aligned_cols=127  Identities=10%  Similarity=0.060  Sum_probs=82.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI   55 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v   55 (258)
                      .+..+.+|++|++++.++++       +.|++||+++...                       +...+.++...++.+ -
T Consensus        57 ~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~  135 (244)
T d1yb1a_          57 KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-H  135 (244)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C
T ss_pred             cEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-C
Confidence            46788999999998887664       6899999998642                       233455556666666 5


Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh----------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA----------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE  124 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~----------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~  124 (258)
                      .++|. |+..+....    +....|..+|+.+..+.+.          .|+.++.|.||++-..+...           .
T Consensus       136 G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~-----------~  200 (244)
T d1yb1a_         136 GHIVTVASAAGHVSV----PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----------P  200 (244)
T ss_dssp             EEEEEECCCC-CCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----------T
T ss_pred             ceEEEeecchhcCCC----CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC-----------c
Confidence            68887 666544321    1223455699998766542          47899999999875543211           0


Q ss_pred             ceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054          125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP  155 (258)
Q Consensus       125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~  155 (258)
                      .       .....+...+|+|+.+...+..+
T Consensus       201 ~-------~~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         201 S-------TSLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             H-------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             C-------ccccCCCCHHHHHHHHHHHHhcC
Confidence            0       01113456789999988877654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.19  E-value=0.00031  Score=53.42  Aligned_cols=148  Identities=11%  Similarity=0.032  Sum_probs=87.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF   58 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~   58 (258)
                      .+..+++|+++++++++.++       +.|++||.++...                   +.....+..++...- +-+.+
T Consensus        52 ~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i  131 (241)
T d2a4ka1          52 EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSL  131 (241)
T ss_dssp             SEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEE
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccce
Confidence            36778999999998877665       6899999987532                   223334444443221 12334


Q ss_pred             Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054           59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG  130 (258)
Q Consensus        59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (258)
                      +. |+.+....     +....|..+|+.++.+.+.       .|+.+.+|.||.+-..+...+..      . ..-.+..
T Consensus       132 ~~~ss~a~~~~-----~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~------~-~~~~~~~  199 (241)
T d2a4ka1         132 VLTGSVAGLGA-----FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP------W-AWEQEVG  199 (241)
T ss_dssp             EEECCCTTCCH-----HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH------H-HHHHHHH
T ss_pred             eeccccccccc-----cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhH------h-HHHHHHh
Confidence            44 44432211     1123455589999877654       57999999999886654332110      0 0000000


Q ss_pred             CCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054          131 DGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP  166 (258)
Q Consensus       131 ~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g  166 (258)
                      . .-.--+...+|+|+++..++.+. .. .|+.+.+-|
T Consensus       200 ~-~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDG  236 (241)
T d2a4ka1         200 A-SPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDG  236 (241)
T ss_dssp             T-STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             C-CCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEeCC
Confidence            0 00012568999999999999764 22 477888865

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.17  E-value=0.00053  Score=53.01  Aligned_cols=153  Identities=12%  Similarity=0.019  Sum_probs=87.6

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~vk   56 (258)
                      +..+.+|++|++++.+.++       +.|++++.++...                   +.....+.+++.    +.| --
T Consensus        70 ~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g-~~  148 (272)
T d1g0oa_          70 AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG-RL  148 (272)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC-EE
T ss_pred             eeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccc-cc
Confidence            6778899999988887765       6799999987532                   233334444443    333 11


Q ss_pred             EEEcCCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCC---CCCCCc-
Q 025054           57 RFFPTEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGAT---APPREN-  125 (258)
Q Consensus        57 ~~v~S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~---~~~~~~-  125 (258)
                      .++.|+.+.....    +....|..+|+.++.+.+.       .|+.+..|.||++-..+...+......   ...... 
T Consensus       149 i~i~s~~~~~~~~----~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  224 (272)
T d1g0oa_         149 ILMGSITGQAKAV----PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEV  224 (272)
T ss_dssp             EEECCGGGTCSSC----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHH
T ss_pred             ccccccccccccc----cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHH
Confidence            2222444332211    1234455699999877753       689999999999876543211000000   000000 


Q ss_pred             --eEec-cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          126 --ILFY-GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       126 --~~~~-g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                        .... ..+-  --+...+|+|.++..++.+..  -.|+.+.+-|
T Consensus       225 ~~~~~~~~~Pl--gR~~~peevA~~v~fL~s~~s~~itG~~i~vDG  268 (272)
T d1g0oa_         225 DEYAAVQWSPL--RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  268 (272)
T ss_dssp             HHHHHHHSCTT--CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHccCCC--CCCcCHHHHHHHHHHHhCchhcCccCceEeECC
Confidence              0000 0000  126789999999999997653  2477787765

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.16  E-value=0.0011  Score=50.81  Aligned_cols=155  Identities=14%  Similarity=0.120  Sum_probs=92.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH------HhC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK------EVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~------~~g   53 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                   +.+...+++++.      +.+
T Consensus        52 ~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~  131 (257)
T d2rhca1          52 EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG  131 (257)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT
T ss_pred             cEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC
Confidence            36778999999998887665       5899999998532                   344455555553      344


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCC-C-CCCCCC
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQP-G-ATAPPR  123 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~-~-~~~~~~  123 (258)
                       -.++|. |+.......    +....|..+|+.+..+.+.       .|+.+..|.||++-..+...+... . ......
T Consensus       132 -~g~Ii~i~S~~~~~~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~  206 (257)
T d2rhca1         132 -TGRIVNIASTGGKQGV----VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVST  206 (257)
T ss_dssp             -EEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCH
T ss_pred             -Cccccccccccccccc----ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccCh
Confidence             456776 554333221    1245677799999877754       579999999998865432111000 0 000000


Q ss_pred             C-ceEeccCCCcee-eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          124 E-NILFYGDGQPKA-IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       124 ~-~~~~~g~g~~~~-~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      . ...-.-. ..++ -+...+|+|.+++.++++..  -.|+.+.+-|
T Consensus       207 ~e~~~~~~~-~~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDG  252 (257)
T d2rhca1         207 EEAFDRITA-RVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCG  252 (257)
T ss_dssp             HHHHHHHHT-TSTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHh-cCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence            0 0000000 0000 16789999999999997642  2477888865

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.16  E-value=8.5e-05  Score=57.17  Aligned_cols=150  Identities=10%  Similarity=0.046  Sum_probs=83.1

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhC-C
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVG-N   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g-~   54 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                       +.....++.++...- +
T Consensus        59 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~  138 (256)
T d1ulua_          59 GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE  138 (256)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE
T ss_pred             cccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc
Confidence            36778999999988877664       6899999987421                       111222222222110 0


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      =.++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||.+............  .......
T Consensus       139 ~G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~--~~~~~~~  212 (256)
T d1ulua_         139 GGGIVTLTYYASEKVV----PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFT--KMYDRVA  212 (256)
T ss_dssp             EEEEEEEECGGGTSBC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CH--HHHHHHH
T ss_pred             CCEEEEEeehHhcCCC----CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhH--HHHHHHH
Confidence            124665 554333221    2244566799999877654       5899999999987664432211000  0000000


Q ss_pred             -EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                       ..|   - . -+...+|+|.+++.++.+..  -.|+.+.+-|
T Consensus       213 ~~~p---l-~-R~~~pedvA~~v~fL~S~~s~~itG~~i~VDG  250 (256)
T d1ulua_         213 QTAP---L-R-RNITQEEVGNLGLFLLSPLASGITGEVVYVDA  250 (256)
T ss_dssp             HHST---T-S-SCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcCC---C-C-CCcCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence             011   0 1 15678999999999987653  2477888865

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00079  Score=51.37  Aligned_cols=152  Identities=10%  Similarity=0.099  Sum_probs=91.2

Q ss_pred             CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhC
Q 025054            5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVG   53 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g   53 (258)
                      .++..+.+|++|++++.++++       +.|++||.++...                        +...+.++...++.+
T Consensus        51 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~  130 (250)
T d1ydea1          51 PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ  130 (250)
T ss_dssp             TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC
Confidence            357889999999998887665       6899999997421                        222344444555544


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                        .++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+...+.... .. ....
T Consensus       131 --G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~-~~-~~~~  202 (250)
T d1ydea1         131 --GNVINISSLVGAIGQ----AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM-PD-PRAS  202 (250)
T ss_dssp             --CEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTS-SS-HHHH
T ss_pred             --CCCcccccccccccc----cCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcC-CC-HHHH
Confidence              36776 654332211    1245677799999877653       6899999999998764432211100 00 0000


Q ss_pred             e-Eec-cCCCceeeeeccchHHHHHHHHhcCCCC-CCceEEEcC
Q 025054          126 I-LFY-GDGQPKAIFNKEEDIATYTIKAVDDPRT-LNKTLYLRP  166 (258)
Q Consensus       126 ~-~~~-g~g~~~~~~v~~~D~a~~~~~~l~~~~~-~~~~~~l~g  166 (258)
                      + ... ..+- . -+...+|+|.+++.++.+... .|+.+.+-|
T Consensus       203 ~~~~~~~~pl-~-R~g~p~eva~~v~fL~Sda~~itG~~i~vDG  244 (250)
T d1ydea1         203 IREGMLAQPL-G-RMGQPAEVGAAAVFLASEANFCTGIELLVTG  244 (250)
T ss_dssp             HHHHHHTSTT-S-SCBCHHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHHhcCCC-C-CCCCHHHHHHHHHHHhCccCCCcCCeEEECC
Confidence            0 000 0000 1 256899999999998864332 477788865

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.05  E-value=0.00048  Score=52.73  Aligned_cols=151  Identities=12%  Similarity=0.029  Sum_probs=88.6

Q ss_pred             CceeEEeccCC-CHHHHHHhh-------CCCcEEEEccCccc-----------hh----chHHHHHHHHHh--CCccEEE
Q 025054            5 INCLIAQGDLH-DHESLVKAI-------KPVDVVISAVGRTE-----------VE----DQFKLIAAIKEV--GNIKRFF   59 (258)
Q Consensus         5 ~gv~~~~~D~~-d~~~l~~al-------~g~d~Vi~~~~~~~-----------~~----~~~~li~aa~~~--g~vk~~v   59 (258)
                      .++.+...|++ +.+++.+++       .+.|++|+.++...           +.    ..+.++...++.  +.-.++|
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii  134 (254)
T d1sbya1          55 VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIA  134 (254)
T ss_dssp             SEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEE
T ss_pred             CCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEE
Confidence            35788899997 555555444       36899999998643           22    334444444333  2135677


Q ss_pred             c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054           60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD  131 (258)
Q Consensus        60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  131 (258)
                      . |+.......    +....|..+|+.+..+.+.       .++.+..|.||++..++...+....  .........+  
T Consensus       135 ~isS~~~~~~~----~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~--~~~~~~~~~~--  206 (254)
T d1sbya1         135 NICSVTGFNAI----HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL--DVEPRVAELL--  206 (254)
T ss_dssp             EECCGGGTSCC----TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG--GSCTTHHHHH--
T ss_pred             EEechhhccCC----CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccch--hHHHHHHhcc--
Confidence            6 555443221    1244677799998766543       5899999999998876543321110  0111110111  


Q ss_pred             CCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       132 g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                        ...+....+++|++++.+++... .|+.+.+-|
T Consensus       207 --~~~~~~~~e~va~~~~~~~~~~~-tG~vi~vdg  238 (254)
T d1sbya1         207 --LSHPTQTSEQCGQNFVKAIEANK-NGAIWKLDL  238 (254)
T ss_dssp             --TTSCCEEHHHHHHHHHHHHHHCC-TTCEEEEET
T ss_pred             --ccCCCCCHHHHHHHHHHhhhCCC-CCCEEEECC
Confidence              11234578999999988886543 566676654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.03  E-value=0.0023  Score=49.39  Aligned_cols=154  Identities=14%  Similarity=0.102  Sum_probs=90.2

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------------hhchHHHHHHHHHhC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------------VEDQFKLIAAIKEVG   53 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------------~~~~~~li~aa~~~g   53 (258)
                      .+..+.+|++|++++.++++       +.|+++|.++...                         +...+.++...++.+
T Consensus        57 ~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~  136 (274)
T d1xhla_          57 KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK  136 (274)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc
Confidence            47789999999988877664       6799999987421                         223344445555555


Q ss_pred             CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                       -.+++. |+.+.....    +....|..+|+.++.+.+.       .|+.+..|.||++..++........ . .....
T Consensus       137 -~g~ii~~ss~~~~~~~----~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~-~-~~~~~  209 (274)
T d1xhla_         137 -GEIVNVSSIVAGPQAH----SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPE-T-ASDKL  209 (274)
T ss_dssp             -CEEEEECCGGGSSSCC----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCH-H-HHHHH
T ss_pred             -cccccchhhhhccccC----CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccc-h-hhHHH
Confidence             456666 544332211    1233455699999877653       5899999999998765432211000 0 00000


Q ss_pred             eEeccC--CCce-eeeeccchHHHHHHHHhcCC--C-CCCceEEEcC
Q 025054          126 ILFYGD--GQPK-AIFNKEEDIATYTIKAVDDP--R-TLNKTLYLRP  166 (258)
Q Consensus       126 ~~~~g~--g~~~-~~~v~~~D~a~~~~~~l~~~--~-~~~~~~~l~g  166 (258)
                      ......  ...+ --+...+|+|.+++.++..+  . -.|+.+.+-|
T Consensus       210 ~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDG  256 (274)
T d1xhla_         210 YSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADG  256 (274)
T ss_dssp             HHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             HHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCc
Confidence            000000  0000 01557999999999988642  3 2577888876

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.96  E-value=0.001  Score=50.97  Aligned_cols=155  Identities=12%  Similarity=0.021  Sum_probs=90.5

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN   54 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~   54 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                        +...+.++..+++.+ 
T Consensus        55 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-  133 (260)
T d1zema1          55 EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-  133 (260)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-
Confidence            36778999999988777665       6899999987431                        223344444445555 


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC---------CCCC
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM---------AQPG  117 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~---------~~~~  117 (258)
                      --++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++...+....         ....
T Consensus       134 ~G~II~isS~~~~~~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~  209 (260)
T d1zema1         134 YGRIVNTASMAGVKGP----PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYF  209 (260)
T ss_dssp             CEEEEEECCHHHHSCC----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTS
T ss_pred             CCCCCeeechhhccCC----cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhccccc
Confidence            457887 664332211    1234566799999877653       589999999999876543110         0000


Q ss_pred             CCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054          118 ATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       118 ~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      ........-.+...--. .-+...+|+|.+++.++.+.. . .|+.+.+-|
T Consensus       210 ~~~~~~~~~~~~~~~Pl-~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  259 (260)
T d1zema1         210 STDPKVVAQQMIGSVPM-RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  259 (260)
T ss_dssp             CSSHHHHHHHHHHTSTT-SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             ccCHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence            00000000000000000 115688999999999987642 2 466777653

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.93  E-value=0.0033  Score=48.35  Aligned_cols=155  Identities=14%  Similarity=0.030  Sum_probs=88.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------h----hchHHHHHHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------V----EDQFKLIAAIKE   51 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~----~~~~~li~aa~~   51 (258)
                      .+..+.+|++|++++.++++       +.|++||.++...                       +    ...+.++...++
T Consensus        58 ~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~  137 (272)
T d1xkqa_          58 QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVA  137 (272)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccc
Confidence            47889999999998877665       6899999987421                       1    222344444444


Q ss_pred             hCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC-
Q 025054           52 VGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP-  122 (258)
Q Consensus        52 ~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~-  122 (258)
                      .+ =..++. |+.+.....    +....|..+|+.+..+.+.       .|+.+..|.||++-..+............. 
T Consensus       138 ~~-g~iI~~~Ss~a~~~~~----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~  212 (272)
T d1xkqa_         138 SK-GEIVNVSSIVAGPQAQ----PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKF  212 (272)
T ss_dssp             HT-CEEEEECCGGGSSSCC----CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHH
T ss_pred             cC-CccccccchhccccCC----CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHH
Confidence            44 244444 443322211    1234455699999876653       689999999998876543321110000000 


Q ss_pred             CCceEeccCCCce-eeeeccchHHHHHHHHhcCC--CC-CCceEEEcC
Q 025054          123 RENILFYGDGQPK-AIFNKEEDIATYTIKAVDDP--RT-LNKTLYLRP  166 (258)
Q Consensus       123 ~~~~~~~g~g~~~-~~~v~~~D~a~~~~~~l~~~--~~-~~~~~~l~g  166 (258)
                      ........ ...+ --+...+|+|.+++.++.++  .. .|+.+.+-|
T Consensus       213 ~~~~~~~~-~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDG  259 (272)
T d1xkqa_         213 YNFMASHK-ECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADG  259 (272)
T ss_dssp             HHHHHHCT-TTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             HHHHHHHh-cCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCc
Confidence            00000000 0000 01568899999999998753  22 578888876

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.80  E-value=0.014  Score=43.94  Aligned_cols=136  Identities=13%  Similarity=0.024  Sum_probs=73.5

Q ss_pred             CceeEEeccCCCHHHHHHhhC---------CCcEEEEccCccc------------------------hhchHHHHHHHHH
Q 025054            5 INCLIAQGDLHDHESLVKAIK---------PVDVVISAVGRTE------------------------VEDQFKLIAAIKE   51 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~---------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~   51 (258)
                      .++.++.+|++|.+++.++++         +.|++|+.++...                        +...+.++...++
T Consensus        51 ~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~  130 (250)
T d1yo6a1          51 SRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKN  130 (250)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH
T ss_pred             CceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            468899999999988877654         3799999998421                        1222333444443


Q ss_pred             hCC----------ccEEEc-CCC-CCCCCC--CCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCc
Q 025054           52 VGN----------IKRFFP-TEY-GSNVDA--GHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFL  110 (258)
Q Consensus        52 ~g~----------vk~~v~-S~~-~~~~~~--~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~  110 (258)
                      .+.          ..+++. |+. +.....  .....+...|..+|+.+..+.+       ..|+.+..|.||++-..+.
T Consensus       131 ~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~  210 (250)
T d1yo6a1         131 AASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             HHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred             hccCCCCccccceeccccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC
Confidence            320          123333 322 111111  1111123347779999876654       3689999999997754321


Q ss_pred             CCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEE
Q 025054          111 PTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLY  163 (258)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~  163 (258)
                      ..                       ....+.++.++.++..+..+  ...|+.|+
T Consensus       211 ~~-----------------------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~  242 (250)
T d1yo6a1         211 GK-----------------------NAALTVEQSTAELISSFNKLDNSHNGRFFM  242 (250)
T ss_dssp             -------------------------------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred             CC-----------------------CCCCCHHHHHHHHHHHHhcCCCCCCeEEEC
Confidence            10                       11245678888888888764  23455443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.69  E-value=0.0082  Score=45.30  Aligned_cols=102  Identities=14%  Similarity=0.085  Sum_probs=62.4

Q ss_pred             CceeEEeccCCCHHHHHHhhC---------CCcEEEEccCccc------------------------hhchHHHHHHHHH
Q 025054            5 INCLIAQGDLHDHESLVKAIK---------PVDVVISAVGRTE------------------------VEDQFKLIAAIKE   51 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~al~---------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~   51 (258)
                      .++.++.+|++|++++.++++         +.|++|+.++...                        +...+.++...++
T Consensus        53 ~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~  132 (248)
T d1snya_          53 SNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK  132 (248)
T ss_dssp             TTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence            368899999999887776543         4799999987421                        1222334433443


Q ss_pred             h-----------CCccEEEc-CCC-CCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccC
Q 025054           52 V-----------GNIKRFFP-TEY-GSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFF  109 (258)
Q Consensus        52 ~-----------g~vk~~v~-S~~-~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~  109 (258)
                      +           + -.++|. |+. +.....  +.+....|..+|+.+..+.+       ..|+.+..|.||++-..+
T Consensus       133 ~~~~~~~~~~~~~-~g~ii~i~S~~g~~~~~--~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         133 AAKANESQPMGVG-RAAIINMSSILGSIQGN--TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             HHHHTTTSCSSTT-TCEEEEECCGGGCSTTC--CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             hhhcccccccccc-ccccccccccccccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            2           2 245665 443 322111  11123356679999876654       368999999999876544

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=95.76  E-value=0.045  Score=41.81  Aligned_cols=154  Identities=12%  Similarity=-0.024  Sum_probs=87.4

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------------------------hhchHHHHHHHH
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------------------------VEDQFKLIAAIK   50 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------------------------~~~~~~li~aa~   50 (258)
                      .+..+.+|++|.+++.++++       +.|++++.++...                            +...+.++...+
T Consensus        52 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~  131 (276)
T d1bdba_          52 NVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALV  131 (276)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHH
Confidence            46788999999988877654       6899999987421                            122344555555


Q ss_pred             HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCC-CCCCCCC
Q 025054           51 EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQ-PGATAPP  122 (258)
Q Consensus        51 ~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~-~~~~~~~  122 (258)
                      +.+  .++|. |+.......    +....|..+|+.++.+.+.      .++.+..|.||++-.++...... .......
T Consensus       132 ~~~--g~iI~i~S~~~~~~~----~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~  205 (276)
T d1bdba_         132 ASR--GNVIFTISNAGFYPN----GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAIS  205 (276)
T ss_dssp             HHT--CEEEEECCGGGTSTT----SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC-------
T ss_pred             hcC--CCceeeeechhccCC----CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccC
Confidence            554  24554 443222211    1234566799999877653      45899999999887654322110 0000000


Q ss_pred             CC-ceEeccCCCcee-eeeccchHHHHHHHHhcCC--C-CCCceEEEcC
Q 025054          123 RE-NILFYGDGQPKA-IFNKEEDIATYTIKAVDDP--R-TLNKTLYLRP  166 (258)
Q Consensus       123 ~~-~~~~~g~g~~~~-~~v~~~D~a~~~~~~l~~~--~-~~~~~~~l~g  166 (258)
                      .. ....... ..+. -+...+|+|.+++.++..+  . -.|+.+.+-|
T Consensus       206 ~~~~~~~~~~-~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDG  253 (276)
T d1bdba_         206 TVPLADMLKS-VLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDG  253 (276)
T ss_dssp             --CHHHHHTT-TCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESS
T ss_pred             cHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECc
Confidence            00 0000100 1111 1567899999999887633  2 2478888865

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.66  E-value=0.0094  Score=45.56  Aligned_cols=150  Identities=12%  Similarity=0.018  Sum_probs=83.6

Q ss_pred             eeEEeccCCCHHHHHHhh-------CCCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAI-------KPVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      ..+...|+++.++..+++       .+.|++++.++...                       ...............+-.
T Consensus        57 ~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (274)
T d2pd4a1          57 PYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG  136 (274)
T ss_dssp             CCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred             eeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccC
Confidence            566788888877766665       36799999887532                       001112222222111122


Q ss_pred             EEE-c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           57 RFF-P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        57 ~~v-~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      ..| . |+.+.....    .....|..+|..++.+.+.       .|+.+..|.||.+............    ......
T Consensus       137 ~~i~~~s~~~~~~~~----~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~----~~~~~~  208 (274)
T d2pd4a1         137 ASVLTLSYLGSTKYM----AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFR----MILKWN  208 (274)
T ss_dssp             EEEEEEECGGGTSBC----TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHH----HHHHHH
T ss_pred             cceeeeccccccccc----ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchH----HHHHHH
Confidence            333 3 544433221    1234556699999887654       6899999999988765443221100    000000


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g  166 (258)
                      ..-.  ...-+...+|+|.++..++++..  -.|+.+.+-|
T Consensus       209 ~~~~--p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDG  247 (274)
T d2pd4a1         209 EINA--PLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDA  247 (274)
T ss_dssp             HHHS--TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhh--hccCCcCHHHHHHHHHHHhChhhCCCcCceEEECC
Confidence            0000  01125789999999999998652  2477888875

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.60  E-value=0.0066  Score=46.01  Aligned_cols=150  Identities=10%  Similarity=0.037  Sum_probs=83.8

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHh-CC
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEV-GN   54 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~-g~   54 (258)
                      +.....|..+..+....++       ..|.+++.++...                        ......+..++... ++
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (258)
T d1qsga_          57 DIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP  136 (258)
T ss_dssp             CCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             cceeecccchHHHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            5566777777666555543       4588888876431                        11122222333221 10


Q ss_pred             ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      =+.++. |+.+.....    +....|..+|+.++.+.+.       +|+.+..|+||.+...+.......... .....-
T Consensus       137 ~~~Ii~iss~~~~~~~----~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~-~~~~~~  211 (258)
T d1qsga_         137 GSALLTLSYLGAERAI----PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKM-LAHCEA  211 (258)
T ss_dssp             EEEEEEEECGGGTSBC----TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHH-HHHHHH
T ss_pred             CcEEEEecchhhccCC----CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhH-HHHHHh
Confidence            133555 666543321    1234566799999987764       589999999999876654332110000 000000


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP  166 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g  166 (258)
                      .+|   - . -+...+|+|.++..++.+. .. .|+.+.+-|
T Consensus       212 ~~p---l-~-R~~~peeia~~v~fL~s~~s~~itG~~i~vDG  248 (258)
T d1qsga_         212 VTP---I-R-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG  248 (258)
T ss_dssp             HST---T-S-SCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCC---C-C-CCcCHHHHHHHHHHHhCchhcCccCceEEECc
Confidence            011   0 1 1678999999999999765 22 467787765

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.045  Score=40.92  Aligned_cols=96  Identities=9%  Similarity=-0.009  Sum_probs=52.9

Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF  128 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||.+...+...+..-. ........++
T Consensus       144 ~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~-~~~~~~~~pl  218 (248)
T d2o23a1         144 VIINTASVAAFEGQ----VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKV-CNFLASQVPF  218 (248)
T ss_dssp             EEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSS
T ss_pred             EEEEecchhhccCC----CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHH-HHHHHhcCCC
Confidence            5777 665443221    1234566799999887764       5899999999988765543321100 0000001111


Q ss_pred             ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEE
Q 025054          129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLY  163 (258)
Q Consensus       129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~  163 (258)
                      .+      -+...+|+|.++..+++++--.|+.++
T Consensus       219 ~~------R~g~peevA~~v~fL~s~~~itGq~I~  247 (248)
T d2o23a1         219 PS------RLGDPAEYAHLVQAIIENPFLNGEVIR  247 (248)
T ss_dssp             SC------SCBCHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred             CC------CCcCHHHHHHHHHHHHhCCCCCceEeE
Confidence            11      156889999999998875422355544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=95.23  E-value=0.022  Score=43.55  Aligned_cols=86  Identities=10%  Similarity=-0.000  Sum_probs=49.8

Q ss_pred             CccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHH
Q 025054           76 AKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYT  148 (258)
Q Consensus        76 ~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~  148 (258)
                      ...|..+|+.++.+.+.       .|+.+..|.||+....  .... ...........++.+      -+...+|+|.++
T Consensus       187 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~--~~~~-~~~~~~~~~~~pl~~------R~~~peeiA~~v  257 (284)
T d1e7wa_         187 YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--DDMP-PAVWEGHRSKVPLYQ------RDSSAAEVSDVV  257 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG--GGSC-HHHHHHHHTTCTTTT------SCBCHHHHHHHH
T ss_pred             eeeeccccccchhhhHHHHHHhCCcccccccccccccccc--ccCC-HHHHHHHHhcCCCCC------CCCCHHHHHHHH
Confidence            45677799999877754       5899999999952211  0000 000000000011111      156799999999


Q ss_pred             HHHhcCCC--CCCceEEEcCCCCcc
Q 025054          149 IKAVDDPR--TLNKTLYLRPPKNIY  171 (258)
Q Consensus       149 ~~~l~~~~--~~~~~~~l~g~~~~~  171 (258)
                      +.++.+..  -.|+.+.+-| |-.+
T Consensus       258 ~fL~S~~s~~itG~~i~VDG-G~sl  281 (284)
T d1e7wa_         258 IFLCSSKAKYITGTCVKVDG-GYSL  281 (284)
T ss_dssp             HHHHSGGGTTCCSCEEEEST-TGGG
T ss_pred             HHHhCchhcCccCCeEEECc-Chhc
Confidence            99987653  2477888876 5333

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.97  E-value=0.094  Score=39.41  Aligned_cols=150  Identities=9%  Similarity=0.008  Sum_probs=84.6

Q ss_pred             ceeEEeccCCCHHHHHHhhC-----------CCcEEEEccCccc----------------------hhchHHHHHHHHH-
Q 025054            6 NCLIAQGDLHDHESLVKAIK-----------PVDVVISAVGRTE----------------------VEDQFKLIAAIKE-   51 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-----------g~d~Vi~~~~~~~----------------------~~~~~~li~aa~~-   51 (258)
                      .+..+.+|++|++++.++++           +.|++++.++...                      +.+...+.+++.. 
T Consensus        61 ~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  140 (259)
T d1oaaa_          61 KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNA  140 (259)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence            36778999999988777652           3467888765310                      2334455555533 


Q ss_pred             ---hC-CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCCCCC
Q 025054           52 ---VG-NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGATAP  121 (258)
Q Consensus        52 ---~g-~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~  121 (258)
                         .+ .-.++|. |+.......    +....|..+|+.++.+.+.     .++.+..|.||.+...+........ ...
T Consensus       141 m~~~~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~-~~~  215 (259)
T d1oaaa_         141 FQDSPGLSKTVVNISSLCALQPY----KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETS-KDP  215 (259)
T ss_dssp             SCCCTTCEEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHC-SCH
T ss_pred             HHhcCCCcccccccccccccCCC----ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcC-CCH
Confidence               22 1236776 665443221    2244566799999876653     6899999999988865432211000 000


Q ss_pred             C-CCce-EeccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEE
Q 025054          122 P-RENI-LFYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYL  164 (258)
Q Consensus       122 ~-~~~~-~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l  164 (258)
                      . ...+ .....+    .+.+.+|+|++++.++++.. ..|+.+++
T Consensus       216 ~~~~~~~~~~~~~----r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         216 ELRSKLQKLKSDG----ALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHTT----CSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             HHHHHHHhcCCCC----CCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            0 0000 001111    25688999999999886543 23555543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.04  E-value=0.044  Score=41.74  Aligned_cols=32  Identities=22%  Similarity=0.259  Sum_probs=26.3

Q ss_pred             ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc
Q 025054            6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT   37 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~   37 (258)
                      .+.++.+|++|.++++++++       +.|++||.++..
T Consensus        54 ~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~   92 (275)
T d1wmaa1          54 SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA   92 (275)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred             cEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcC
Confidence            47889999999998876654       689999999853

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.76  E-value=0.051  Score=40.39  Aligned_cols=89  Identities=4%  Similarity=-0.166  Sum_probs=55.0

Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN  125 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~  125 (258)
                      .++|. |+..+....    +....|..+|+.++.+.+.         .|+.+..|.||++...+.....           
T Consensus       122 G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~-----------  186 (236)
T d1dhra_         122 GLLTLAGAKAALDGT----PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM-----------  186 (236)
T ss_dssp             EEEEEECCGGGGSCC----TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHS-----------
T ss_pred             cceeEEccHHHcCCc----cCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhC-----------
Confidence            35776 665443221    1244666799999988764         3688999999988765432110           


Q ss_pred             eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEE
Q 025054          126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYL  164 (258)
Q Consensus       126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l  164 (258)
                         +.  ...-.++..+|+|+.+..+++...  -.|+.+.+
T Consensus       187 ---~~--~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         187 ---PE--ADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             ---TT--SCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             ---cc--chhhcCCCHHHHHHHHHHHhCCCccCCCCCeEEE
Confidence               00  011136778999999999987652  23555554

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.79  E-value=0.35  Score=36.35  Aligned_cols=126  Identities=12%  Similarity=-0.001  Sum_probs=71.3

Q ss_pred             eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054            7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK   56 (258)
Q Consensus         7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk   56 (258)
                      +..+..|.++.+.....++       +.|++++.++...                       +...+.++...++.+  .
T Consensus        66 ~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~--G  143 (269)
T d1xu9a_          66 AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--G  143 (269)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--C
T ss_pred             chhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC--C
Confidence            5567778877665554433       6788888876431                       233445555555433  3


Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ++|. |+......    .+....|..+|+.++.+.+.         .++.++.|.||.+-..+.....            
T Consensus       144 ~ii~isS~~~~~~----~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~------------  207 (269)
T d1xu9a_         144 SIVVVSSLAGKVA----YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV------------  207 (269)
T ss_dssp             EEEEEEEGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS------------
T ss_pred             cceEeccchhcCC----CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhc------------
Confidence            5555 44433222    12345677799998866543         3577888999987654321100            


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcC
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDD  154 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~  154 (258)
                          .+.......+.+++|+.++..+..
T Consensus       208 ----~~~~~~~~~~~e~~a~~i~~~~~~  231 (269)
T d1xu9a_         208 ----SGIVHMQAAPKEECALEIIKGGAL  231 (269)
T ss_dssp             ----CGGGGGGCBCHHHHHHHHHHHHHT
T ss_pred             ----cCCccccCCCHHHHHHHHHHHhhc
Confidence                001112234567888888776544

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=92.65  E-value=0.042  Score=40.83  Aligned_cols=88  Identities=6%  Similarity=-0.128  Sum_probs=52.0

Q ss_pred             EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054           57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI  126 (258)
Q Consensus        57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~  126 (258)
                      ++|. |+.......    +....|..+|+.++.+.+.         .++.+..|.||.+-..+.....            
T Consensus       123 ~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~------------  186 (235)
T d1ooea_         123 LLQLTGAAAAMGPT----PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM------------  186 (235)
T ss_dssp             EEEEECCGGGGSCC----TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS------------
T ss_pred             EEEEeccHHhcCCc----ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhC------------
Confidence            5676 665433221    2245666799999988764         2456777899877654322110            


Q ss_pred             EeccCCCceeeeeccchHHHHHHHHhcCCC---CCCceEEE
Q 025054          127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR---TLNKTLYL  164 (258)
Q Consensus       127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~---~~~~~~~l  164 (258)
                        + + .....++..+|+++.++..+..+.   ..|..+.+
T Consensus       187 --~-~-~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         187 --P-N-ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             --T-T-CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             --c-C-CccccCCCHHHHHHHHHHHhcCccccCCCceEEEE
Confidence              0 0 111236788999999887776542   23556665

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=90.82  E-value=0.061  Score=41.25  Aligned_cols=84  Identities=10%  Similarity=0.010  Sum_probs=49.9

Q ss_pred             CccchhhHHHHHHHHH--------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCce-eeeeccchHHH
Q 025054           76 AKSGYARKAKIRRAIE--------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPK-AIFNKEEDIAT  146 (258)
Q Consensus        76 ~~~~~~~k~~~e~~l~--------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~v~~~D~a~  146 (258)
                      ...|..+|+.+..+.+        ..++.+..|.||++..........   .  . ........ ..+ .-+...+|+|.
T Consensus       189 ~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~---~--~-~~~~~~~~-~~PlgR~~~peevA~  261 (297)
T d1d7oa_         189 GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF---I--D-TMIEYSYN-NAPIQKTLTADEVGN  261 (297)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH---H--H-HHHHHHHH-HSSSCCCBCHHHHHH
T ss_pred             ccceecccccccccccccchhccccceEEecccccccccchhhhhccC---C--H-HHHHHHHh-CCCCCCCCCHHHHHH
Confidence            3456678888776553        258999999999887654432110   0  0 00000000 000 01568999999


Q ss_pred             HHHHHhcCCC-C-CCceEEEcC
Q 025054          147 YTIKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       147 ~~~~~l~~~~-~-~~~~~~l~g  166 (258)
                      +++.++.+.. . .|+.+.+-|
T Consensus       262 ~v~fL~S~~a~~itGq~i~vDG  283 (297)
T d1d7oa_         262 AAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             HHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCchhcCCcCceEEECc
Confidence            9999997652 2 477788865

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.74  E-value=0.12  Score=38.02  Aligned_cols=100  Identities=11%  Similarity=0.039  Sum_probs=59.0

Q ss_pred             cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054           56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL  127 (258)
Q Consensus        56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (258)
                      -++|. |+.......    +....|..+|+.++.+.+.       .|+.+..|.||++................ ....+
T Consensus       127 G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~-~~~~~  201 (241)
T d1uaya_         127 GVIVNTASVAAFEGQ----IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASL-AAQVP  201 (241)
T ss_dssp             EEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHH-HTTCC
T ss_pred             eeeeeecchhhccCC----CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHH-HhcCC
Confidence            36776 654332211    1245677799999877654       68999999999987654322110000000 00111


Q ss_pred             eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054          128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP  166 (258)
Q Consensus       128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g  166 (258)
                      +.+      -+...+|+|.++..++++.--.|+.+.+-|
T Consensus       202 ~~~------R~g~pedvA~~v~fL~s~~~iTG~~i~VDG  234 (241)
T d1uaya_         202 FPP------RLGRPEEYAALVLHILENPMLNGEVVRLDG  234 (241)
T ss_dssp             SSC------SCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CCC------CCcCHHHHHHHHHHHHhCCCCCCCEEEECC
Confidence            111      155789999999999886433578888865

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.34  E-value=0.78  Score=33.93  Aligned_cols=82  Identities=15%  Similarity=-0.089  Sum_probs=49.2

Q ss_pred             CccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHH
Q 025054           76 AKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYT  148 (258)
Q Consensus        76 ~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~  148 (258)
                      ...|..+|+.++.+.+.       .|+.+..|.||++.......  . ..........  +   -. +.+...+|+|.++
T Consensus       169 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~--~-~~~~~~~~~~--p---l~-r~~~~peeva~~v  239 (266)
T d1mxha_         169 FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP--Q-ETQEEYRRKV--P---LG-QSEASAAQIADAI  239 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC--H-HHHHHHHTTC--T---TT-SCCBCHHHHHHHH
T ss_pred             hhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC--H-HHHHHHHhcC--C---CC-CCCCCHHHHHHHH
Confidence            44566699999877654       58999999999765321100  0 0000000000  1   00 1246899999999


Q ss_pred             HHHhcCCC-C-CCceEEEcC
Q 025054          149 IKAVDDPR-T-LNKTLYLRP  166 (258)
Q Consensus       149 ~~~l~~~~-~-~~~~~~l~g  166 (258)
                      +.++++.. . .|+.+.+-|
T Consensus       240 ~fL~s~~s~~itG~~i~vDG  259 (266)
T d1mxha_         240 AFLVSKDAGYITGTTLKVDG  259 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhCCccCCeEEECc
Confidence            99998753 2 467788865

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=90.05  E-value=0.61  Score=34.64  Aligned_cols=91  Identities=8%  Similarity=0.015  Sum_probs=51.6

Q ss_pred             CccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC---CC--ceeeeeccch
Q 025054           76 AKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD---GQ--PKAIFNKEED  143 (258)
Q Consensus        76 ~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---g~--~~~~~v~~~D  143 (258)
                      ...|..+|..++.+.+.       .++.+..|.||.+.......+................-.   ..  ..+.+...+|
T Consensus       157 ~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~d  236 (268)
T d2h7ma1         157 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP  236 (268)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHH
T ss_pred             cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHH
Confidence            34566699999887764       589999999998876543221110000000000000000   00  0123678999


Q ss_pred             HHHHHHHHhcCC-CC-CCceEEEcC
Q 025054          144 IATYTIKAVDDP-RT-LNKTLYLRP  166 (258)
Q Consensus       144 ~a~~~~~~l~~~-~~-~~~~~~l~g  166 (258)
                      +|.++..++.+. .. .|+.+.+-|
T Consensus       237 va~~v~fL~Sd~a~~iTG~~i~vDG  261 (268)
T d2h7ma1         237 VAKTVCALLSDWLPATTGDIIYADG  261 (268)
T ss_dssp             HHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             HHHHHHHHhCchhcCccCCEEEECc
Confidence            999999999764 22 467777765

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.82  E-value=0.56  Score=36.32  Aligned_cols=29  Identities=17%  Similarity=0.180  Sum_probs=22.0

Q ss_pred             eeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054          138 FNKEEDIATYTIKAVDDP-R-TLNKTLYLRP  166 (258)
Q Consensus       138 ~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g  166 (258)
                      +...+|+|.+++.++++. . -.|+.+.+-|
T Consensus       290 ~~~pedvA~~v~fLaSd~s~~iTGq~i~VDG  320 (329)
T d1uh5a_         290 KLLSTDIGSVASFLLSRESRAITGQTIYVDN  320 (329)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhCchhCCccCCeEEECC
Confidence            568899999999988764 2 2477888765

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.10  E-value=0.68  Score=30.42  Aligned_cols=53  Identities=26%  Similarity=0.402  Sum_probs=40.0

Q ss_pred             CceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            5 INCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         5 ~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      .++.++.||.+|++.|.++ ++.+|.++.+.....  ...-+...++..+ ++++|.
T Consensus        43 ~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~--~N~~~~~~~k~~~-~~~iI~   96 (132)
T d1lssa_          43 IDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE--VNLMSSLLAKSYG-INKTIA   96 (132)
T ss_dssp             CSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH--HHHHHHHHHHHTT-CCCEEE
T ss_pred             hhhhhccCcccchhhhhhcChhhhhhhcccCCcHH--HHHHHHHHHHHcC-CceEEE
Confidence            3788999999999999998 688999998877643  2233344567777 887774

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=86.52  E-value=1  Score=29.40  Aligned_cols=57  Identities=16%  Similarity=0.205  Sum_probs=40.1

Q ss_pred             cccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054            2 LYMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP   60 (258)
Q Consensus         2 l~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~   60 (258)
                      +++.+..++.+|.+|++.|.++ ++.+|.||.+++... .....+..+++..+ ..+++.
T Consensus        39 ~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~-~~~~~~~~~~~~~~-~~~iia   96 (134)
T d2hmva1          39 YASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI-QASTLTTLLLKELD-IPNIWV   96 (134)
T ss_dssp             TTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCH-HHHHHHHHHHHHTT-CSEEEE
T ss_pred             HHHhCCcceeeecccchhhhccCCccccEEEEEcCchH-HhHHHHHHHHHHcC-CCcEEe
Confidence            4567888999999999999988 788999988876542 11222334445566 666664

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=86.00  E-value=0.78  Score=29.96  Aligned_cols=49  Identities=18%  Similarity=0.273  Sum_probs=36.3

Q ss_pred             ccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054            3 YMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVG   53 (258)
Q Consensus         3 ~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g   53 (258)
                      ...|+.++.||.+|++.|.++ +..++.++.+...+.  ....++..+++..
T Consensus        38 ~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~--~n~~~~~~~r~~~   87 (129)
T d2fy8a1          38 LRSGANFVHGDPTRVSDLEKANVRGARAVIVNLESDS--ETIHCILGIRKID   87 (129)
T ss_dssp             HHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHH--HHHHHHHHHHHHC
T ss_pred             HhcCccccccccCCHHHHHHhhhhcCcEEEEeccchh--hhHHHHHHHHHHC
Confidence            457899999999999999987 678999998876542  3334455566643

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=84.98  E-value=1.1  Score=30.12  Aligned_cols=47  Identities=21%  Similarity=0.264  Sum_probs=34.9

Q ss_pred             cCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHh
Q 025054            4 MINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEV   52 (258)
Q Consensus         4 ~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~   52 (258)
                      ..|+.++.||.+|++.|.++ ++.++.|+.+.+...  ....++..+++.
T Consensus        48 ~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d~--~n~~~~~~~r~~   95 (153)
T d1id1a_          48 GDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDA--DNAFVVLSAKDM   95 (153)
T ss_dssp             CTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCHH--HHHHHHHHHHHH
T ss_pred             cCCcEEEEccCcchHHHHHhccccCCEEEEccccHH--HHHHHHHHHHHh
Confidence            46899999999999999877 678999998887542  233344455554

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=83.12  E-value=1.3  Score=35.09  Aligned_cols=61  Identities=16%  Similarity=0.202  Sum_probs=47.0

Q ss_pred             cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCC
Q 025054            2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEY   63 (258)
Q Consensus         2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~   63 (258)
                      +...|+++...|..|.+.++++++.-..+|.+=.+.+    +.--+.+.+.|++.| +.-+|-++|
T Consensus       119 ~~~~Gi~~~~~d~~d~~~~~~ai~~~t~lv~~Esp~NP~l~v~Di~~i~~ia~~~g-~~~vvDnT~  183 (392)
T d1gc0a_         119 IGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHG-ATVVVDNTY  183 (392)
T ss_dssp             GGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGT-CEEEEECTT
T ss_pred             hccCCcccccCCccCHHHHHHhCCCCCeEEEecccccceeeecchHHHHHHHHhcC-CEEEEecCc
Confidence            5678999999999999999999986555555444333    667788999999999 877775544

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=82.96  E-value=0.41  Score=33.89  Aligned_cols=31  Identities=19%  Similarity=0.213  Sum_probs=23.6

Q ss_pred             ceeEEeccCCCHHHHHHhhCCCcEEEEccCc
Q 025054            6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGR   36 (258)
Q Consensus         6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~   36 (258)
                      ++.+..+|+.|.+++.++++++|+|||+++.
T Consensus        72 ~~~~~~~d~~~~~~~~~~~~~iDilin~Ag~  102 (191)
T d1luaa1          72 KVNVTAAETADDASRAEAVKGAHFVFTAGAI  102 (191)
T ss_dssp             TCCCEEEECCSHHHHHHHTTTCSEEEECCCT
T ss_pred             chhhhhhhcccHHHHHHHhcCcCeeeecCcc
Confidence            3556677888888888888888888887764

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=81.84  E-value=1.3  Score=32.46  Aligned_cols=83  Identities=10%  Similarity=0.004  Sum_probs=45.6

Q ss_pred             cchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCce-eeeeccchHHHHHH
Q 025054           78 SGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPK-AIFNKEEDIATYTI  149 (258)
Q Consensus        78 ~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~v~~~D~a~~~~  149 (258)
                      +|..+|+.++.+.+.       .|+.+..|.||++...+.........  .. .  .+... ..+ --+...+|+|.++.
T Consensus       154 ~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~--~~-~--~~~~~-~~PlgR~g~p~eva~~v~  227 (257)
T d1fjha_         154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR--YG-E--SIAKF-VPPMGRRAEPSEMASVIA  227 (257)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------------------------C-CCSTTSCCCTHHHHHHHH
T ss_pred             HHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHH--HH-H--HHHhc-CCCCCCCcCHHHHHHHHH
Confidence            466699999877764       68999999999987655432111000  00 0  00000 000 01568999999999


Q ss_pred             HHhcCCC--CCCceEEEcC
Q 025054          150 KAVDDPR--TLNKTLYLRP  166 (258)
Q Consensus       150 ~~l~~~~--~~~~~~~l~g  166 (258)
                      .++++..  -.|+.+.+-|
T Consensus       228 fL~S~~s~~itG~~i~vDG  246 (257)
T d1fjha_         228 FLMSPAASYVHGAQIVIDG  246 (257)
T ss_dssp             HHTSGGGTTCCSCEEEEST
T ss_pred             HHhCchhCCccCceEEeCC
Confidence            9987653  2477888865